BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038558
(369 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 229/354 (64%), Positives = 270/354 (76%), Gaps = 20/354 (5%)
Query: 18 PTTAAGVGGSGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQ--PSIVSSSHSHQHHHY 75
PT+ A GSG LTR+ SAPGS L AVDS+IG+++ S + ++++++ HH Y
Sbjct: 42 PTSIAPASGSG-LTRFGSAPGSFLTRAVDSVIGTTTSGRDFSALVNNNSNNNNNNSHHQY 100
Query: 76 FAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAASSS 135
F+ G DSS + TTESTCKVNSSN KSGLQRSYG NEI + S
Sbjct: 101 FSAG-------DSSSL----TTESTCKVNSSNDLRAPAKSGLQRSYGFNEI------NGS 143
Query: 136 LLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSLSQ 195
LLRQ+SSPAGFLSH + GFS+T TG YNS +GG VSRLKSQLSFT QDSLSQ
Sbjct: 144 LLRQKSSPAGFLSHHLANENGFSITPGTGGYNSSNGPNGGHTVSRLKSQLSFTRQDSLSQ 203
Query: 196 ISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFN 255
ISE SE+ ++G++S +G N+ HSYST FGM SW+ SIVFS PPSKR K +DGD+FN
Sbjct: 204 ISEVSEDIVEGINSNTGHHNSPHSYSTTGFGMGSWDGTNSIVFSGPPSKRMKNIDGDLFN 263
Query: 256 CLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISR 315
CLN L++QF++PQTSLEMATV+ LLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRIS
Sbjct: 264 CLNGLETQFSLPQTSLEMATVEKLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISG 323
Query: 316 KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKPTS 369
+LKKLQDLVPNMDKQTSY+DMLDLAVQHIKGLQ +V+ LHK+LE+CTCGCKPTS
Sbjct: 324 RLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQGEVQKLHKELENCTCGCKPTS 377
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 254/342 (74%), Gaps = 27/342 (7%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGDS 88
GLTRY SAPGS L AVDS+IG+ +V + H+ GDS
Sbjct: 20 GLTRYGSAPGSFLTRAVDSVIGADRELSGLGSTPLVG-----RQQHF---------SGDS 65
Query: 89 SPVSSFTTTESTCKVNSS----NAPGNNTKSGLQRSYGLNEIPQTRAASSSLLRQRSSPA 144
+ T+ESTCKVNSS AP + GLQRSYGLNEI + SL+RQRSSPA
Sbjct: 66 PSI----TSESTCKVNSSSCDRKAPKSGGGGGLQRSYGLNEIAH---GAGSLVRQRSSPA 118
Query: 145 GFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSLSQISEESENGI 204
GFLSH A+E GFS+TR TG YNS R+ G G SRLKSQLSFT QDSLSQISE SEN +
Sbjct: 119 GFLSHLATENGGFSITRGTGGYNS--RNGSGGGPSRLKSQLSFTRQDSLSQISEVSENVV 176
Query: 205 DGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQF 264
+G+ S +G QN+THSYS ASFGM+SW+ SIVFS PSK+ +T DGDI++C NAL++QF
Sbjct: 177 EGIGSDNGSQNSTHSYSAASFGMESWDTPNSIVFSGHPSKQARTGDGDIYSCFNALETQF 236
Query: 265 TMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLV 324
++PQTSLEMATV+ LL IPEDSVPCKIRAKRGCATHPRSIAERERRTRIS KLK LQDLV
Sbjct: 237 SLPQTSLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLV 296
Query: 325 PNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
PNMDKQTSY+DML+LAV+HIKGLQN+VE LHK+LE CTCGCK
Sbjct: 297 PNMDKQTSYADMLELAVKHIKGLQNEVEKLHKELEGCTCGCK 338
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/362 (58%), Positives = 257/362 (70%), Gaps = 49/362 (13%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGDS 88
GL RY SAPGSLL +AVDS++ S+ SP SH H YF+G S++
Sbjct: 18 GLIRYGSAPGSLLTSAVDSLV-STDREFSPL------GSHHIMPHQYFSGDSSS------ 64
Query: 89 SPVSSFTTTESTCKVNSSNAPGNNTKSG-------LQRSYGLNEIP-------------- 127
ESTCKV AP ++ ++G LQRSYG +E+P
Sbjct: 65 ---------ESTCKVA---APPDHKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGG 112
Query: 128 ---QTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQ 184
++ SL+R SSPAGFL+ ++ GFSVTR TGNY+SQG +GG G+SRLKSQ
Sbjct: 113 EGGGGGGSAPSLIRHSSSPAGFLNQLTADNCGFSVTRGTGNYSSQGGCNGGHGISRLKSQ 172
Query: 185 LSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSK 244
LSF QDSLSQISE SEN +DG+SS +G +NATHSY+TASF MD+W+N +IVFS P+K
Sbjct: 173 LSFKRQDSLSQISEVSENMVDGISSDNGHRNATHSYATASFPMDAWDNTNTIVFSTTPNK 232
Query: 245 RTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSI 304
R K ++GDI N L++L+ QF++PQTSLEMA V+ LL +PEDSVPCK+RAKRGCATHPRSI
Sbjct: 233 RAKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSI 292
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AERERRTRIS KLKKLQDLVPNMDKQTSY+DMLDLAVQHIKGLQN+V+ L+K+LE+CTCG
Sbjct: 293 AERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCG 352
Query: 365 CK 366
CK
Sbjct: 353 CK 354
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/362 (56%), Positives = 255/362 (70%), Gaps = 53/362 (14%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGDS 88
GL RY SAPGSLL +AVDS++ S+ SP SH H YF+G S++
Sbjct: 75 GLIRYGSAPGSLLTSAVDSLV-STDREFSPL------GSHHIMPHQYFSGDSSS------ 121
Query: 89 SPVSSFTTTESTCKVNSSNAPGNNTKSG-------LQRSYGLNEIP-------------- 127
ESTCKV AP ++ ++G LQRSYG +E+P
Sbjct: 122 ---------ESTCKVA---APPDHKEAGAGGPAAMLQRSYGFSEMPVAGFSTASSLKGGG 169
Query: 128 ---QTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQ 184
++ SL+R SSPAGFL+ ++ ++TR TGNY+SQG +GG G+SRLKSQ
Sbjct: 170 EGGGGGGSAPSLIRHSSSPAGFLNQLTAD----NLTRGTGNYSSQGGCNGGHGISRLKSQ 225
Query: 185 LSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSK 244
LSF QDSLSQISE SEN +DG+SS +G +NATHSY+TASF MD+W+N +IVFS P+K
Sbjct: 226 LSFKRQDSLSQISEVSENMVDGISSDNGHRNATHSYATASFPMDAWDNTNTIVFSTTPNK 285
Query: 245 RTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSI 304
R K ++GDI N L++L+ QF++PQTSLEMA V+ LL +PEDSVPCK+RAKRGCATHPRSI
Sbjct: 286 RAKNINGDILNSLSSLEPQFSLPQTSLEMAAVEKLLQVPEDSVPCKVRAKRGCATHPRSI 345
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AERERRTRIS KLKKLQDLVPNMDKQTSY+DMLDLAVQHIKGLQN+V+ L+K+LE+CTCG
Sbjct: 346 AERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQNEVQKLNKELENCTCG 405
Query: 365 CK 366
CK
Sbjct: 406 CK 407
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 196/374 (52%), Positives = 242/374 (64%), Gaps = 66/374 (17%)
Query: 27 SGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQ---PSIVSSSHSHQHHHYFAGGSTTT 83
+GGLTRY SAPGS L TAVDS+IG+ P + + PS + HYF+
Sbjct: 26 AGGLTRYGSAPGSFLTTAVDSVIGTRQPDSAATLRAPPSFGA--------HYFSSA---- 73
Query: 84 AGGDSSPVSSFTTTESTCKVNSSNAPGNNTKS------GLQRSYGLNEIP---------- 127
DSS V ES+ KV S++ N+ KS L RSYG N++
Sbjct: 74 ---DSSVV------ESSRKVVQSSSTSNDLKSSSATAAALNRSYGFNDLALGDFSTGRNF 124
Query: 128 ----QTRAASSSLLRQRSSPAGFLSHF--ASETVGFSVTRETGNYNSQGRSSGGLGVSRL 181
++SS L+RQRSSPAGFL H A GFS+T G + RL
Sbjct: 125 NSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGGGNG--------GGRL 176
Query: 182 KSQLSFTGQD-SLSQISEESENGIDGVSSGS-GRQ---NATHSYS-TASFGMDS-WENGT 234
KSQ+SF GQD SLSQISE SE+ ++ +S S G Q N+THS++ +++F MDS W+ +
Sbjct: 177 KSQMSFNGQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSS 236
Query: 235 -SIVFSAPPSKRTKTL-DGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIR 292
SIVF+AP +KR+K D D F L+SQF++PQT+LEMA V+ LL IPEDSVPCKIR
Sbjct: 237 NSIVFAAPHAKRSKHHSDADFFT---GLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIR 293
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKRGCATHPRSIAERERRTRIS KLKKLQ+LVPNMDKQTSYSDMLDLAVQHIKGLQNQ++
Sbjct: 294 AKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQ 353
Query: 353 NLHKDLEHCTCGCK 366
L+K++E+CTCG K
Sbjct: 354 KLNKEVENCTCGSK 367
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/377 (49%), Positives = 233/377 (61%), Gaps = 67/377 (17%)
Query: 26 GSGGLTRYVSAPGSLLRTAVDSIIGSSSPSP------SPSQPSIVSSSHSHQHHHYFAGG 79
G GGL RY SAPGS L + VD +IG S + PS + + G
Sbjct: 19 GGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFI--------------G 64
Query: 80 STTTAGGDSSPVSSFTTTESTCKVNSSN----------APGNNTKSGLQRSYG-LNEIPQ 128
+ T DSS + S +TT C VN+S+ +N L RSYG NEI Q
Sbjct: 65 NFFTGAADSSSLRSDSTT---CGVNNSSDGHKQLGNNNNNNSNKDIFLDRSYGGFNEISQ 121
Query: 129 TRAASS----------SLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV 178
++ SL RQRSSPA F ++ AS+ FS+ + T +Y+ QG S+GG G
Sbjct: 122 QHKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGH 181
Query: 179 SRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGM---DSWENGT- 234
SRLKSQLSFT DSL++I+E +E V GSG HS+S ASFG DSW++G+
Sbjct: 182 SRLKSQLSFTNHDSLARINEVNETP---VHDGSG-----HSFSAASFGAATTDSWDDGSG 233
Query: 235 SIVFSAP-PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRA 293
SI F+ PSKR+K +D +F SQ+++P + M +DN + +PEDSVPCKIRA
Sbjct: 234 SIGFTVTRPSKRSKDMDSGLF-------SQYSLP-SDTSMNYMDNFMQLPEDSVPCKIRA 285
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KRGCATHPRSIAERERRTRIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ+Q++N
Sbjct: 286 KRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQN 345
Query: 354 LHKDLEHCTCGC--KPT 368
L KD E+CTCGC KP+
Sbjct: 346 LKKDQENCTCGCSEKPS 362
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 188/377 (49%), Positives = 233/377 (61%), Gaps = 67/377 (17%)
Query: 26 GSGGLTRYVSAPGSLLRTAVDSIIGSSSPSP------SPSQPSIVSSSHSHQHHHYFAGG 79
G GGL RY SAPGS L + VD +IG S + PS + + G
Sbjct: 19 GGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFI--------------G 64
Query: 80 STTTAGGDSSPVSSFTTTESTCKVNSSN----------APGNNTKSGLQRSYG-LNEIPQ 128
+ T DSS + S +TT C VN+S+ +N L RSYG NEI Q
Sbjct: 65 NFFTGAADSSSLRSDSTT---CGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQ 121
Query: 129 TRAASS----------SLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV 178
++ SL RQRSSPA F ++ AS+ FS+ + T +Y+ QG S+GG G
Sbjct: 122 QHKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGH 181
Query: 179 SRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGM---DSWENGT- 234
SRLKSQLSFT DSL++I+E +E V GSG HS+S ASFG DSW++G+
Sbjct: 182 SRLKSQLSFTNHDSLARINEVNETP---VHDGSG-----HSFSAASFGAATTDSWDDGSG 233
Query: 235 SIVFSAP-PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRA 293
SI F+ PSKR+K +D +F SQ+++P + M +DN + +PEDSVPCKIRA
Sbjct: 234 SIGFTVTRPSKRSKDMDSGLF-------SQYSLP-SDTSMNYMDNFMQLPEDSVPCKIRA 285
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KRGCATHPRSIAERERRTRIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ+Q++N
Sbjct: 286 KRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQN 345
Query: 354 LHKDLEHCTCGC--KPT 368
L KD E+CTCGC KP+
Sbjct: 346 LKKDQENCTCGCSEKPS 362
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 185/354 (52%), Positives = 227/354 (64%), Gaps = 49/354 (13%)
Query: 30 LTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGDSS 89
L RY SAPGSLL + VD +IG++ + + P + F G AG DSS
Sbjct: 26 LIRYGSAPGSLLNSVVDEVIGTNGRAGDFNYPPPEN----------FLG--QFFAGADSS 73
Query: 90 PVSSFTTTESTCKVNSSNAP----GN-NTKSGLQRSYG-LNEIPQTRA-------ASSSL 136
+ S +TT C VNSSN GN N L RSYG NEI Q ++ S SL
Sbjct: 74 SLRSDSTT---CVVNSSNGQKQQLGNINKDLLLDRSYGGFNEISQHKSNDLGNSSGSYSL 130
Query: 137 LRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSLSQI 196
RQRSSPA ++ + + FS+ + T +YN QG S+ G G SRLKSQLSFT D LS+I
Sbjct: 131 ARQRSSPADLFTYLSGDKNNFSLNQPTSDYNPQGGSNAGRGQSRLKSQLSFTSHDPLSRI 190
Query: 197 SEESENGIDGVSSGSGRQNATHSYSTASFGM--DSWENGT-SIVFSAP--PSKRTKTLDG 251
SE +E V GSG HS+S ASFG DSW++G+ SI F+ P+KR+K +D
Sbjct: 191 SEVNETS---VHDGSG-----HSFSVASFGAPTDSWDDGSGSIGFTVTTRPTKRSKDMDS 242
Query: 252 DIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRT 311
+F SQ+++P + M +DN + +PEDSVPCKIRAKRGCATHPRSIAERERRT
Sbjct: 243 GLF-------SQYSLP-SDTSMNYMDNYMQLPEDSVPCKIRAKRGCATHPRSIAERERRT 294
Query: 312 RISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC 365
RIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ+Q++NL K+ E+CTCGC
Sbjct: 295 RISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKEQENCTCGC 348
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 189/362 (52%), Positives = 231/362 (63%), Gaps = 66/362 (18%)
Query: 27 SGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQ---PSIVSSSHSHQHHHYFAGGSTTT 83
+GGLTRY SAPGS L TAVDS+IG+ P + + PS + HYF+
Sbjct: 26 AGGLTRYGSAPGSFLTTAVDSVIGTRQPDSAATLRAPPSFGA--------HYFSSA---- 73
Query: 84 AGGDSSPVSSFTTTESTCKVNSSNAPGNNTKS------GLQRSYGLNEIP---------- 127
DSS V ES+ KV S++ N+ KS L RSYG N++
Sbjct: 74 ---DSSVV------ESSRKVVQSSSTSNDLKSSSATAAALNRSYGFNDLALGDFSTGRNF 124
Query: 128 ----QTRAASSSLLRQRSSPAGFLSHF--ASETVGFSVTRETGNYNSQGRSSGGLGVSRL 181
++SS L+RQRSSPAGFL H A GFS+T G + RL
Sbjct: 125 NSNGGQSSSSSPLVRQRSSPAGFLGHLSVAEPNGGFSLTMGGGGGGNG--------GGRL 176
Query: 182 KSQLSFTGQD-SLSQISEESENGIDGVSSGS-GRQ---NATHSYS-TASFGMDS-WENGT 234
KSQ+SF GQD SLSQISE SE+ ++ +S S G Q N+THS++ +++F MDS W+ +
Sbjct: 177 KSQMSFNGQDNSLSQISEISESFVEAANSCSNGLQSNTNSTHSFAPSSAFAMDSSWDTSS 236
Query: 235 -SIVFSAPPSKRTKTL-DGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIR 292
SIVF+AP +KR+K D D F L+SQF++PQT+LEMA V+ LL IPEDSVPCKIR
Sbjct: 237 NSIVFAAPHAKRSKHHSDADFFT---GLESQFSLPQTTLEMAAVERLLQIPEDSVPCKIR 293
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKRGCATHPRSIAERERRTRIS KLKKLQ+LVPNMDKQTSYSDMLDLAVQHIKGLQNQ++
Sbjct: 294 AKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQHIKGLQNQIQ 353
Query: 353 NL 354
L
Sbjct: 354 VL 355
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 177/359 (49%), Positives = 223/359 (62%), Gaps = 44/359 (12%)
Query: 26 GSGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAG 85
G GGL RY SAPGS L VD +IG S + SS + F G T G
Sbjct: 19 GGGGLIRYGSAPGSFLNAVVDEVIGGGSSNARDFTGYQPSSDN-------FIGNFFT--G 69
Query: 86 GDSSPVSSFTTTESTCKVNSSNAP------GNNTKSGLQRSYG-LNEIPQTRAASS---- 134
DSS + S +TT C VNSS+ NN L R+YG NEI Q ++
Sbjct: 70 ADSSSLRSDSTT---CGVNSSDGQKQLGNNNNNKDIFLDRTYGGYNEISQQHKSNDIGGN 126
Query: 135 ------SLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFT 188
SL RQRSSPA F ++ +++ FS+ + T +YN QG S+ G G SRLKSQLSFT
Sbjct: 127 SSGSSYSLARQRSSPADFFTYLSADKNNFSLNQPTSDYNPQGGSNAGRGHSRLKSQLSFT 186
Query: 189 GQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGT-SIVFSAP-PSKRT 246
DSL++I+E +E + G ++ + S + DSW++G+ SI F+ P+KR+
Sbjct: 187 NHDSLARINEVNETPVH-----DGSDHSFSAASFGAAATDSWDDGSGSIGFTVTRPNKRS 241
Query: 247 KTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAE 306
K +D +F SQ+++P + M +DN + +PEDSVPCKIRAKRGCATHPRSIAE
Sbjct: 242 KDMDSGLF-------SQYSLP-SDASMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAE 293
Query: 307 RERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC 365
RERRTRIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ+Q++NL KD E+CTCGC
Sbjct: 294 RERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGC 352
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 181/343 (52%), Positives = 211/343 (61%), Gaps = 82/343 (23%)
Query: 28 GGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGD 87
GLTRY SAPGSLL + VDS+IG S PSP YF+G S+
Sbjct: 19 AGLTRYGSAPGSLLTSTVDSLIGGSRPSP------------------YFSGESS------ 54
Query: 88 SSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAASSSLLRQRSSPAGFL 147
ES CK QRS+ N P + +SSLLRQ+SSPAGFL
Sbjct: 55 ----------ESPCKE--------------QRSFH-NHPP---SFASSLLRQKSSPAGFL 86
Query: 148 SHFASET-VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSLSQISEESENGIDG 206
SH ++ VGF++T S+ S LKSQLSFT +SLS +D
Sbjct: 87 SHLSNHHGVGFTITP-----GGLSNSNSNSNCSLLKSQLSFT-HESLSNTV-----NVDP 135
Query: 207 VSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTL--DGDIFNCLN-ALDSQ 263
S+ +FGMD W+N SI FSA +KR+KT D DI + LN AL+SQ
Sbjct: 136 --------------SSTTFGMDPWDNN-SIAFSATSTKRSKTNTNDPDILHSLNSALESQ 180
Query: 264 FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDL 323
F +P TSLEM+TVD LL+IPEDSVPCKIRAKRGCATHPRSIAERERRTRIS KLKKLQDL
Sbjct: 181 FNLPHTSLEMSTVDKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDL 240
Query: 324 VPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
VPNMDKQTSY+DMLDLAVQHIKGLQ QV+ LHK++E+CTCGCK
Sbjct: 241 VPNMDKQTSYADMLDLAVQHIKGLQTQVQKLHKEMENCTCGCK 283
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 169/370 (45%), Positives = 209/370 (56%), Gaps = 88/370 (23%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGDS 88
GLTRY SAP SLL T VD+IIG S P Q HYF+
Sbjct: 27 GLTRYGSAPSSLLNTTVDAIIGGSRLLPGTGQ-------------HYFS----------- 62
Query: 89 SPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLS 148
+ST + + + + SY E S+LLRQ+SSPAGFL+
Sbjct: 63 --------DDSTQQQQQHHHQQQQQQQQQRSSY---EGQGGGFDGSALLRQKSSPAGFLN 111
Query: 149 HFASETV-------------GFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTG--QDSL 193
H A+ GF++TR G SRLKS+LSFTG Q+ L
Sbjct: 112 HLATLNHNNNNNNNNNNAGGGFTITR---------------GNSRLKSELSFTGGGQECL 156
Query: 194 SQISEESENGIDGVSSGSGRQNAT-HSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGD 252
S+ISE N +D S+ + N + H+ ST ++G +N + S +T+T +
Sbjct: 157 SRISE---NVVDYASAAAAAGNGSLHTNSTNTWGGGGPDNNNNSNSIVFSSSQTQTNNNS 213
Query: 253 ---------------IFNCLNALDSQFTMPQTSLEMATVDNLL-NIPEDSVPCKIRAKRG 296
+ +CLNAL++Q+++PQTSLEM D L+ NIP+DSVPCKIRAKRG
Sbjct: 214 KKRSSRTDPNDDPDLLLHCLNALETQYSLPQTSLEM---DQLMHNIPQDSVPCKIRAKRG 270
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
CATHPRSIAERERRTRIS KLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ QV+ LH+
Sbjct: 271 CATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQTQVQKLHE 330
Query: 357 DLEHCTCGCK 366
DLE+CTCGCK
Sbjct: 331 DLENCTCGCK 340
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/156 (71%), Positives = 132/156 (84%), Gaps = 4/156 (2%)
Query: 214 QNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEM 273
QN THSYS A FGM+SW+N SIVFS PPSK+ + DGDI++C N L++Q +LE+
Sbjct: 4 QNCTHSYSAAGFGMESWDNPNSIVFSGPPSKQARNGDGDIYSCFNGLETQVL----NLEI 59
Query: 274 ATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
TV+ LL++PEDSVPCKIRAKRG ATHPRSIAERERRTRIS KLKKLQDLVPNMDKQTSY
Sbjct: 60 ETVEKLLHVPEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSY 119
Query: 334 SDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKPTS 369
+DMLD AVQHIKGLQN+VE LHK++E+CTCGC+ ++
Sbjct: 120 ADMLDFAVQHIKGLQNEVEKLHKEMENCTCGCEKST 155
>gi|6850309|gb|AAF29386.1|AC009999_6 Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269. EST gb|AI996380 comes from this
gene [Arabidopsis thaliana]
Length = 323
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 196/336 (58%), Gaps = 65/336 (19%)
Query: 26 GSGGLTRYVSAPGSLLRTAVDSIIGSSSPSP------SPSQPSIVSSSHSHQHHHYFAGG 79
G GGL RY SAPGS L + VD +IG S + PS + + G
Sbjct: 19 GGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSSDNFI--------------G 64
Query: 80 STTTAGGDSSPVSSFTTTESTCKVNSSN----------APGNNTKSGLQRSYG-LNEIPQ 128
+ T DSS + S +TT C VN+S+ +N L RSYG NEI Q
Sbjct: 65 NFFTGAADSSSLRSDSTT---CGVNNSSDGQKQLGNNNNNNSNKDIFLDRSYGGFNEISQ 121
Query: 129 TRAASS----------SLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV 178
++ SL RQRSSPA F ++ AS+ FS+ + T +Y+ QG S+GG G
Sbjct: 122 QHKSNDIGGGNSSGSYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGSNGGRGH 181
Query: 179 SRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGM---DSWENGT- 234
SRLKSQLSFT DSL++I+E +E V GSG HS+S ASFG DSW++G+
Sbjct: 182 SRLKSQLSFTNHDSLARINEVNETP---VHDGSG-----HSFSAASFGAATTDSWDDGSG 233
Query: 235 SIVFSAP-PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRA 293
SI F+ PSKR+K +D +F SQ+++P + M +DN + +PEDSVPCKIRA
Sbjct: 234 SIGFTVTRPSKRSKDMDSGLF-------SQYSLP-SDTSMNYMDNFMQLPEDSVPCKIRA 285
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK 329
KRGCATHPRSIAERERRTRIS KLKKLQDLVPNMDK
Sbjct: 286 KRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDK 321
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 166/245 (67%), Gaps = 33/245 (13%)
Query: 136 LLRQRSSPAGFLS-HFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTG----- 189
L R RSSPAGF H ++ GFS+ R G Y G SRLKS+L F+
Sbjct: 82 LFRHRSSPAGFYDQHLPTDPNGFSLGRPNGGYGGGGEQG----PSRLKSELRFSSGSSSH 137
Query: 190 --QDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFG---MDSWENGTS-IVFSAP-P 242
+SL +ISE V + + +N S S+ SFG ++W+N +S I F+ P
Sbjct: 138 QEHNSLPRISE--------VEAAAAARNGVAS-SSMSFGNNRTNNWDNSSSHISFTIDQP 188
Query: 243 SKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPR 302
KR+K + D F L++Q++MPQT+LEMAT++NL+NIPEDSVPC+ RAKRG ATHPR
Sbjct: 189 GKRSK--NSDFF----TLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPR 242
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCT 362
SIAERERRTRIS KLKKLQ+LVPNMDKQTSY+DMLDLAV+HIKGLQ+QVE+L K +E CT
Sbjct: 243 SIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESLEKGMERCT 302
Query: 363 CG-CK 366
CG CK
Sbjct: 303 CGACK 307
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 149/376 (39%), Positives = 199/376 (52%), Gaps = 63/376 (16%)
Query: 16 MGPTTAAGVGGSGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHY 75
M P +A G G L RY SAPGSLL DS+ P P S S+ S
Sbjct: 12 MRPPSAQGQG----LARYGSAPGSLLAAIADSVTRGDPAPPPPPPVSRFYSAES------ 61
Query: 76 FAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYG----LNEIPQTR- 130
S T+ ES+C+ + P L+R+YG + P +
Sbjct: 62 ----------------SGLTSCESSCRTDCGRPP-------LERAYGGSGEIRVPPPLQQ 98
Query: 131 --------AASSSLLRQRSSPAGFLSHFASETVGFSVTR-ETGNYNSQGRSSG-GLGVSR 180
A+S L R SSPAG LS ++ G + T G+Y G + G G ++
Sbjct: 99 QQHHLLAPPAASPLFRHSSSPAGLLSRLMTDPHGMAATGGAMGSYTQAGSDAALGHGHAQ 158
Query: 181 LKSQLSFTGQDSLSQISE---------ESENGIDGVSSGSGRQNATHSYSTASFGMDSWE 231
L SQ SF+ QD L QISE ES G G +S S + SY + +F + SW+
Sbjct: 159 LSSQWSFSRQD-LPQISEMGMIPADIGESIVGAGGCNSSS-DAAQSSSYLSRTFSVGSWD 216
Query: 232 NGTSIVFSAPPSKRTKTLDG----DIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSV 287
+ SI+FS+ P K+ K D+ + +D QF + +SLE+ +D+ L + +DSV
Sbjct: 217 DTNSIMFSSAPCKKPKVDPAAGADDMVTNFSTIDPQFGLSNSSLELPGMDDYLQLQQDSV 276
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
C++RA+RGCATHPRSIAERERRTRIS++LKKLQDLVPNMDKQT+ SDMLDLAV +IK L
Sbjct: 277 ACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKEL 336
Query: 348 QNQVENLHKDLEHCTC 363
++QVE L D +C C
Sbjct: 337 KDQVEKLKHDQANCCC 352
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 155/230 (67%), Gaps = 32/230 (13%)
Query: 136 LLRQRSSPAGFLS-HFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTG----- 189
L R RSSPAGF H ++ GFS+ R G Y G SRLKS+L F+
Sbjct: 82 LFRHRSSPAGFYDQHLPTDPNGFSLGRPNGGYGGGGEQG----PSRLKSELRFSSGSSSH 137
Query: 190 --QDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFG---MDSWENGTS-IVFSAP-P 242
+SL +ISE V + + +N S S+ SFG ++W+N +S I F+ P
Sbjct: 138 QEHNSLPRISE--------VEAAAAARNGVAS-SSMSFGNNRTNNWDNSSSHISFTIDQP 188
Query: 243 SKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPR 302
KR+K + D F L++Q++MPQT+LEMAT++NL+NIPEDSVPC+ RAKRG ATHPR
Sbjct: 189 GKRSK--NSDFF----TLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPR 242
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
SIAERERRTRIS KLKKLQ+LVPNMDKQTSY+DMLDLAV+HIKGLQ+QVE
Sbjct: 243 SIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVE 292
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 155/235 (65%), Gaps = 27/235 (11%)
Query: 131 AASSSLLRQRSSPAGFLS-HFASET--VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSF 187
A+SSSL R RSSPAGF H ++ GFS+ + Y+ G SRLKS+L F
Sbjct: 74 ASSSSLFRHRSSPAGFYDQHLPTDPNGTGFSLGQPNRGYSGGGGGE--RAPSRLKSELRF 131
Query: 188 TG-------QDSLSQI--SEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVF 238
+G SL +I +E + I+GV+S S S+ + + + + I F
Sbjct: 132 SGGSSSHQEHKSLPRILEAEAAAAAINGVASSS------MSFGNHNHNNNWDNSSSHISF 185
Query: 239 SAP-PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGC 297
+ P KR+K + D F L++QF+MPQTSLEMA ++NL+NIPEDSVPCK RAKRG
Sbjct: 186 TIDQPGKRSK--NSDFF----TLETQFSMPQTSLEMARMENLMNIPEDSVPCKARAKRGF 239
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
ATHPRSIAERERRTRIS KLKKLQ+LVPNMDKQTSY+DMLDLAV+HIKGLQ+QVE
Sbjct: 240 ATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVE 294
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 196/377 (51%), Gaps = 73/377 (19%)
Query: 28 GGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGD 87
GGL RY SAPG+ L DS++ S P P S+ +F+GG T++G
Sbjct: 23 GGLARYGSAPGAFLAALADSVVASPPPPPVVSR--------------FFSGGGETSSG-- 66
Query: 88 SSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYG-LNEI-------PQTRAASSSLLRQ 139
+ ES+C +T LQR+YG EI P A S LLR
Sbjct: 67 ------LASCESSC----------HTDGRLQRAYGGSGEIIHHVPQPPPHPAPQSGLLRH 110
Query: 140 RSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV----SRLKSQLSFTGQDSLSQ 195
SSPAG LS ++ G + + +++G + RL SQ SF+ Q
Sbjct: 111 SSSPAGLLSRLMADPHGNNGGMGNIGGYTHSQAAGNVDAMAQHRRLSSQWSFSRQQQDMI 170
Query: 196 ISEESENGI---------------------DGVSSGSGRQNATHSYSTASFGMDSWENGT 234
+ + SE G+ DG + + + +F M SW++
Sbjct: 171 MPQISEMGMALATMPADIGESIATGGNSSSDGAGGNAQSSSYGGGGLSRNFSMSSWDDTN 230
Query: 235 SIVFSAPP--SKRTKTL------DGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDS 286
SI+FS+P SK+ K + D + + +DSQF + +SLEM +D+ L + +DS
Sbjct: 231 SIMFSSPARSSKKAKVMVDLDHADDGMVTSFSNIDSQFGVSSSSLEMPGMDDYLQLQQDS 290
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V C++RAKRGCATHPRSIAERERRTRIS++L+KLQDLVPNMDKQT+ SDMLD+AV +IK
Sbjct: 291 VACRVRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKV 350
Query: 347 LQNQVENLHKDLEHCTC 363
LQ+Q+E L +D +C+C
Sbjct: 351 LQDQIEKLKQDQGNCSC 367
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 196/375 (52%), Gaps = 50/375 (13%)
Query: 30 LTRYVSAPGSLLRTAVDSII---------GSSSPSPSPSQPSIVSSSHSHQHHHYFAGGS 80
L RY SAPGSLL + DS+I P YF+ S
Sbjct: 22 LARYGSAPGSLLASIADSVIRGRGVGVVDQLHHHQHQHQLPPPPPPQQQQMVGRYFSAES 81
Query: 81 TTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSG---LQRSYGLNEIPQTRAASSS-- 135
S T+ ES+C+ ++ + G L+R+YG + A+S++
Sbjct: 82 -----------SGLTSCESSCRTTTTTSTAAAADVGRHPLERAYGGSGEIHVDASSAAVP 130
Query: 136 LLRQRSSPAGFLSHFASET--VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSL 193
L R SSPAG LS ++ G + TR G Y+ G +G + RL SQ SF+ QD L
Sbjct: 131 LFRHSSSPAGLLSRLMADPHGNGMAATRGMGGYSGGGGDAGAMAHRRLSSQWSFSRQD-L 189
Query: 194 SQISEES-------ENGIDGVSSGSGRQNATHS------YSTASFGMDSWENGTSIVFSA 240
QISE E+ + G S A H S+ +F M SW++ SI+FS
Sbjct: 190 PQISEMGGLIPDIGESIVTGGGGNSSSNGAGHGAQSSSFLSSRNFSMSSWDDTNSIMFSP 249
Query: 241 PPSKRTKTLD--------GDIFNCLNALDSQFTM-PQTSLEMATVDNLLNIPEDSVPCKI 291
P S + + D+ + + +DSQF + Q+SLEMA +D+ L + DSV C+
Sbjct: 250 PSSSKKARVAAAAAGDHGDDMVSSFSNIDSQFGLSKQSSLEMAGMDDFLQLQPDSVACRA 309
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRGCATHPRSIAERERRTRIS++LKKLQDLVPNMDKQT+ SDMLD+AV +IK LQ QV
Sbjct: 310 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 369
Query: 352 ENLHKDLEHCTCGCK 366
E L D +CTC K
Sbjct: 370 EKLKHDQANCTCSGK 384
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 149/375 (39%), Positives = 196/375 (52%), Gaps = 50/375 (13%)
Query: 30 LTRYVSAPGSLLRTAVDSII---------GSSSPSPSPSQPSIVSSSHSHQHHHYFAGGS 80
L RY SAPGSLL + DS+I P YF+ S
Sbjct: 22 LARYGSAPGSLLASIADSVIRGRGVGVVDQLHHHQHQHQLPPPPPPQQQQMVGRYFSAES 81
Query: 81 TTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSG---LQRSYGLNEIPQTRAASSS-- 135
S T+ ES+C+ ++ + G L+R+YG + A+S++
Sbjct: 82 -----------SGLTSCESSCRTTTTTSTAAAADVGRHPLERAYGGSGEIHVDASSAAVP 130
Query: 136 LLRQRSSPAGFLSHFASET--VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSL 193
L R SSPAG LS ++ G + TR G Y+ G +G + RL SQ SF+ QD L
Sbjct: 131 LFRHSSSPAGLLSRLMADPHGNGMAATRGMGGYSGGGGDAGAMAHRRLSSQWSFSRQD-L 189
Query: 194 SQISEES-------ENGIDGVSSGSGRQNATHS------YSTASFGMDSWENGTSIVFSA 240
QISE E+ + G S A H S+ +F M SW++ SI+FS
Sbjct: 190 PQISEMGGLIPDIGESIVTGGGGNSSSDGAGHGAQSSSFLSSRNFSMSSWDDTNSIMFSP 249
Query: 241 PPSKRTKTLD--------GDIFNCLNALDSQFTM-PQTSLEMATVDNLLNIPEDSVPCKI 291
P S + + D+ + + +DSQF + Q+SLEMA +D+ L + DSV C+
Sbjct: 250 PSSSKKARVAAAAAGDHGDDMVSSFSNIDSQFGLSKQSSLEMAGMDDFLQLQPDSVACRA 309
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRGCATHPRSIAERERRTRIS++LKKLQDLVPNMDKQT+ SDMLD+AV +IK LQ QV
Sbjct: 310 RAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQV 369
Query: 352 ENLHKDLEHCTCGCK 366
E L D +CTC K
Sbjct: 370 EKLKHDQANCTCSGK 384
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/232 (53%), Positives = 155/232 (66%), Gaps = 34/232 (14%)
Query: 136 LLRQRSSPAGFLS-HFASET--VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTG--- 189
L R RSSPAGF H ++ GFS+ R G Y G SRLKS+L F+
Sbjct: 82 LFRHRSSPAGFYDQHLPTDPNGTGFSLGRPNGGYGGGGEQG----PSRLKSELRFSSGSS 137
Query: 190 ----QDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFG---MDSWENGTS-IVFSAP 241
+SL +ISE V + + +N S S+ SFG ++W+N +S I F+
Sbjct: 138 SHQEHNSLPRISE--------VEAAAAARNGVAS-SSMSFGNNRTNNWDNSSSHISFTID 188
Query: 242 -PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATH 300
P KR+K + D F L++Q++MPQT+LEMAT++NL+NIPEDSVPC+ RAKRG ATH
Sbjct: 189 QPGKRSK--NSDFF----TLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATH 242
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
PRSIAERERRTRIS KLKKLQ+LVPNMDKQTSY+DMLDLAV+HIKGLQ+QVE
Sbjct: 243 PRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVE 294
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 186/358 (51%), Gaps = 50/358 (13%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHYFAGGSTTTAGGDS 88
GL RY SAPGSLL +S+ P VS +S +
Sbjct: 23 GLARYGSAPGSLLAAIAESVTRGDPAPPP----PPVSRFYSAES---------------- 62
Query: 89 SPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYG--------LNEIPQTRAASSSLLRQR 140
S T+ ES+C+ + L+R+YG Q A+S+L R
Sbjct: 63 ---SGLTSCESSCRTDGGGG---GRPPPLERAYGGSGEIRVPPPPQQQHPLAASTLFRHS 116
Query: 141 SSPAGFLSHFASET-VGFSVTRETGNYNSQGRSSG-GLGVSRLKSQLSFTGQDSLSQISE 198
SSPAG LS ++ + G+Y G + G G +L SQ SF+ QD L QISE
Sbjct: 117 SSPAGLLSRLMADPHGMAATGGGMGSYPQVGSDAAMGHGHRQLSSQWSFSRQD-LPQISE 175
Query: 199 ESENGIDGVS-------------SGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKR 245
G S G Q + SY + +F + SW++ SI+FS+P K
Sbjct: 176 MGMIPDIGESIVAGGCNSSSEGGGGGATQAQSSSYLSRNFSVSSWDDTNSIMFSSPSKKP 235
Query: 246 TKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIA 305
D+ + +DSQF + +SLEM+ +D+ L + +DSV C++RAKRGCATHPRSIA
Sbjct: 236 KVDPADDMVTSFSNIDSQFGLSNSSLEMSGMDDYLQMQQDSVACRVRAKRGCATHPRSIA 295
Query: 306 ERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
ERERRTRIS++LKKLQDLVPNMDKQT+ SDMLDLAV +IK L+++VE L D +C C
Sbjct: 296 ERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDRVEKLKHDQANCCC 353
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 146/254 (57%), Gaps = 23/254 (9%)
Query: 136 LLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGR----SSGGLGVSRLKSQLSFT--- 188
L R SSP GF S + S R G+ + R SS ++K+ LSF
Sbjct: 113 LTRHNSSPPGFFSSPVMDNGFSSSARPAGSSLGEVRHGAMSSSSNNNKKMKAPLSFASSR 172
Query: 189 -GQDSLSQISEES----ENGIDGVSSGSGRQN---ATH-----SYSTASFGMDSWENGTS 235
G LSQISE+ + I G + GR +TH S+S+ F + SWE+ S
Sbjct: 173 QGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSGGFSIGSWEDSNS 232
Query: 236 IVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKR 295
IVFS K + DI L+ +SQ P+ EMA V+ L + D VP ++RAKR
Sbjct: 233 IVFSTSTGKSGAHGNDDIIATLSNYESQLVAPR---EMAGVEKYLQMQHDQVPFRVRAKR 289
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
GCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS SDMLDLAV HIKGLQ+Q++ L
Sbjct: 290 GCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLK 349
Query: 356 KDLEHCTCGCKPTS 369
+D E CTC CK S
Sbjct: 350 EDKEKCTCSCKQAS 363
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 189/380 (49%), Gaps = 51/380 (13%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIG---------------SSSPSPSPSQPSIVSS------S 67
GL RY SAP S+L + V+ G SSSP +SS S
Sbjct: 42 GLMRYRSAPSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSGDS 101
Query: 68 HSHQHHHYFAGGSTTTAGGDSSPVSS-----FTTTESTCKVNSSNAPGNNTKSGLQRSYG 122
S + + GGDS V T+++ V +S N S +
Sbjct: 102 SSQNLQEFGERPAIKQEGGDSEMVYQSLPGHNLVTDNSVSVGNSMDSAFNVMSSMALENS 161
Query: 123 LNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLG-VSRL 181
+ + A S+L RQ SSPAG S + GF V RE G++ + ++G ++L
Sbjct: 162 MQATKMSTANGSNLARQNSSPAGLFSDLGVDN-GFVVMREGGSFRAGNGTNGEASPTNKL 220
Query: 182 KSQLSFT-GQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSA 240
+ ++F+ GQ L QI+E E I G S + + + + F DSW+ S
Sbjct: 221 RRHVNFSSGQRMLPQIAEIGEECIGGRSP---EGDVSEARYMSRFTSDSWDGA-----SL 272
Query: 241 PPSKRTKTLDGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDS 286
KR + DG++F+ LN LD+Q ++P+T E AT++ L+ +S
Sbjct: 273 SGLKRQRDNDGNMFSGLNTLDNQDGNSGNRVTGLTHHLSLPKTLSETATIEKFLDFQGNS 332
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
VPCKIRAKRG ATHPRSIAER RRTRIS +++KLQ+L PNMDKQT+ +DMLDLAV+HIK
Sbjct: 333 VPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKD 392
Query: 347 LQNQVENLHKDLEHCTCGCK 366
LQ QV+ L CTC K
Sbjct: 393 LQKQVKTLTDTKAKCTCSSK 412
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 161/274 (58%), Gaps = 22/274 (8%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLSHF-ASETVGFSVTRETGNYNSQGRSSG 174
G+ S GL+ + SSLLRQ SSPAG S+ S GF+ + GNY + S+G
Sbjct: 101 GMVSSMGLDHEAPHKGFGSSLLRQSSSPAGLFSNNNISFQNGFATMKGVGNYGAVNGSNG 160
Query: 175 GLG--VSRLKSQLSFTGQDS-----LSQISEESENGIDGVSSGSGRQ---NATHSYSTAS 224
L ++RLK+Q+SF+ +++ LSQISE I+ S + N T Y
Sbjct: 161 ELSPCINRLKNQVSFSPRNASSLGMLSQISELGSEDIEATSPDDDTKHGGNDTQHYGPG- 219
Query: 225 FGMDSWENGTSIVFSAPPSKRTKT---------LDGDIFNCLNALDSQFTMPQTSLEMAT 275
F SW + + + KR ++ +G++ N +N L ++P+TS EM T
Sbjct: 220 FPFGSWNDTPQLSENISGLKRGRSGNEKMFSDVQNGELANQVNMLSHHLSLPKTSAEMIT 279
Query: 276 VDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSD 335
++ LL P DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVP+MDKQT+ +D
Sbjct: 280 MEKLLQFP-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHMDKQTNTAD 338
Query: 336 MLDLAVQHIKGLQNQVENLHKDLEHCTCGCKPTS 369
MLDLAV++IK LQ Q + L + +C C P +
Sbjct: 339 MLDLAVEYIKDLQKQFKTLSEKRANCKCISMPKA 372
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 129/206 (62%), Gaps = 19/206 (9%)
Query: 180 RLKSQLSFT----GQDSLSQISEES----ENGIDGVSSGSGRQN---ATH-----SYSTA 223
++K+ LSF G LSQISE+ + I G + GR +TH S+S+
Sbjct: 10 KMKAPLSFASSRQGSGGLSQISEDGIPDLTDSIHGAAHHHGRSEENVSTHDHVVRSFSSG 69
Query: 224 SFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIP 283
F + SWE+ SIVFS K + DI L+ +SQ P+ EMA V+ L +
Sbjct: 70 GFSIGSWEDSNSIVFSTSTGKSGAHGNDDIIATLSNYESQLVAPR---EMAGVEKYLQMQ 126
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
D VP ++RAKRGCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS SDMLDLAV H
Sbjct: 127 HDQVPFRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDH 186
Query: 344 IKGLQNQVENLHKDLEHCTCGCKPTS 369
IKGLQ+Q++ L +D E CTC CK S
Sbjct: 187 IKGLQSQLQTLKEDKEKCTCSCKQAS 212
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 200/381 (52%), Gaps = 73/381 (19%)
Query: 30 LTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQH-----HHYFAGGSTTTA 84
L RY SAPGS L DS+ +P+ S H HQ +F+G S
Sbjct: 18 LARYGSAPGSFLAALADSVSRGGGEAPASHSHSHSQQQHHHQPVAAVVSRFFSGES---- 73
Query: 85 GGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYG-LNEI------PQTRAASSSLL 137
S T+ ES+C+ +++AP + LQR+YG EI + LL
Sbjct: 74 -------SGLTSCESSCR--TADAP-----AALQRAYGGSGEIHVPPPALPQQQQQPGLL 119
Query: 138 RQRSSPAGFLSHFASE--------TVGFSVTRETGNYNSQGRSSGGLGVS---------- 179
R SSPAG LS ++ G +S S GG G +
Sbjct: 120 RHSSSPAGLLSRLMADPHGNGGGMGGARGGGMGGGYAHSHSHSQGGAGGNADAMAAAQQR 179
Query: 180 RLKSQLSFT-GQDSLSQISEESENGI-----------DGVSSGSGRQNATHSYSTASFGM 227
RL SQ SF+ QD + I+E + +++G G + + S+S M
Sbjct: 180 RLSSQWSFSRQQDMMPHIAEMGMAMPTPTPMPPADVGESIATGHGSGDLSRSFS-----M 234
Query: 228 DSWENGTS-IVFSAPPS-KRTKTL-DGD--IFNCLNALDSQFTMPQTSLEMATVDNLLNI 282
SW++ S I+FSAPP K+ K + DGD + + +DSQF +SL+M +D+ L +
Sbjct: 235 SSWDDTNSNIIFSAPPGGKKAKVMADGDDGMVTSFSNIDSQFG---SSLDMPGMDDYLQL 291
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
+DSV C++RAKRGCATHPRSIAERERRTRIS++L++LQDLVPNMDKQT+ SDMLD+AV
Sbjct: 292 QQDSVACRVRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVD 351
Query: 343 HIKGLQNQVENLHKDLEHCTC 363
+IK LQ+Q+E L +D +C+C
Sbjct: 352 YIKVLQDQIEKLKQDQGNCSC 372
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 145/237 (61%), Gaps = 18/237 (7%)
Query: 133 SSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDS 192
+S+L+RQ SSPAGFL H E G+ G + + GG SRLK QLSF+ +
Sbjct: 140 ASNLIRQSSSPAGFLDHLNMEN-GYGAMLRAGMATADSLAGGG---SRLKGQLSFSSRQG 195
Query: 193 --LSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDS-WENGTSIV---FSAPPSKRT 246
+SQISE + G SS Y + M S WE+ ++++ S R
Sbjct: 196 SLMSQISEMDSEEVGG-SSPEASGGGGRGY-IPGYPMGSGWEDSSALLSDNLSGVKRPRD 253
Query: 247 KTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAE 306
+ G + L QF++P+TS EMAT++ L +D+VPCKIRAKRGCATHPRSIAE
Sbjct: 254 SSEPGQ-----SGLTHQFSVPKTSSEMATIEKFLQF-QDAVPCKIRAKRGCATHPRSIAE 307
Query: 307 RERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
R RRT+IS +++KLQ+LVPNMDKQT+ SDMLDLAV +IK LQ QV+ L + ++CTC
Sbjct: 308 RVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKVLKESQDNCTC 364
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 189/364 (51%), Gaps = 53/364 (14%)
Query: 27 SGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHH------------- 73
S GL RY SAP ++L + + S+S + SP V S +HH
Sbjct: 20 SSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDN---VFSRFLAEHHTRDDKPSPPPPAA 76
Query: 74 -HYFAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAA 132
H+ + + S + V + KSGL R+ ++I +T AA
Sbjct: 77 VHFPSEADMASQQQQQMMFHSHHHQQQQQMVGA--------KSGLYRTVS-SDI-ETAAA 126
Query: 133 -----SSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSF 187
+S+L+RQ SSPAGFL H + G+ G + + G SRLK QLSF
Sbjct: 127 VGTGGASNLIRQSSSPAGFLDHLNMDN-GYGAMLRAGMATADSLAGSG---SRLKGQLSF 182
Query: 188 TGQDS--LSQISEESENGIDGVS---SGSGRQNATHSYSTASFGMDSWENGTSIV---FS 239
+ + +SQISE + G S +G GR Y S WE+ ++++ S
Sbjct: 183 SSRQGSLMSQISEMDSEEVGGSSPEAAGGGR-GYIPGYPMGSGS--GWEDSSALMSDNLS 239
Query: 240 APPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCAT 299
R + G + + QF++P+TS EMA++D L +D+VPCKIRAKRGCAT
Sbjct: 240 GLKRPRDSSEPGQ-----SRITHQFSLPKTSSEMASIDKFLQF-QDAVPCKIRAKRGCAT 293
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
HPRSIAER RRT+IS +++KLQ+LVPNMDKQT+ SDMLDLAV +IK LQ QV+ L +
Sbjct: 294 HPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKVLKETQA 353
Query: 360 HCTC 363
+CTC
Sbjct: 354 NCTC 357
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 134/202 (66%), Gaps = 15/202 (7%)
Query: 175 GLGVSRLKSQLSFTGQDSLSQISE---------ESENGIDGVSSGSGRQNATHSYSTASF 225
G G ++L SQ SF+ QD L QISE ES G G +S S + SY + +F
Sbjct: 25 GHGHAQLSSQWSFSRQD-LPQISEMGMIPADIGESIVGAGGCNSSS-DAAQSSSYLSRTF 82
Query: 226 GMDSWENGTSIVFSAPPSKRTKTLDG----DIFNCLNALDSQFTMPQTSLEMATVDNLLN 281
+ SW++ SI+FS+ P K+ K D+ + +D QF + +SLE+ +D+ L
Sbjct: 83 SVGSWDDTNSIMFSSAPCKKPKVDPAAGADDMVTNFSTIDPQFGLSNSSLELPGMDDYLQ 142
Query: 282 IPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
+ +DSV C++RA+RGCATHPRSIAERERRTRIS++LKKLQDLVPNMDKQT+ SDMLDLAV
Sbjct: 143 LQQDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAV 202
Query: 342 QHIKGLQNQVENLHKDLEHCTC 363
++IK L++QVE L D +C C
Sbjct: 203 EYIKELKDQVEKLKHDQANCCC 224
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 190/387 (49%), Gaps = 66/387 (17%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGS---------SSPSPSPSQPSIVS----------SSHS 69
GL RY SAPGS L + ++ S S SP +I+S S+S
Sbjct: 56 GLMRYRSAPGSFLDSLINGTTSGGGNECQDYRSFRSSSPEMETILSRFMSTCNGSGDSNS 115
Query: 70 HQHHHYFAGGSTTTAGGD------SSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGL 123
Y D SS V++ ++ +++S N + + L
Sbjct: 116 QNLQEYGERPEMKQEMEDPQMVYQSSAVNNLANNGNSVDISNSVDSSFNVMNPMAMENSL 175
Query: 124 NEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLG------ 177
+ S+L+RQ SSPAGF S+ + GF++T+E G + + S GL
Sbjct: 176 PARKFSAVNGSNLVRQHSSPAGFFSNLGVDNNGFTITKEVGGF----QVSNGLNGESNPS 231
Query: 178 VSRLKSQLSFT-GQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSI 236
SRL + L+F+ GQ L QI+E +G +N S S G + N +
Sbjct: 232 TSRLGNHLNFSSGQRLLPQIAE------------TGDENPGASSPEGSIGKRQYMNFAND 279
Query: 237 VFSAPPS---KRTKTLDGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNL 279
+ S KR + DG +++ LN L++Q ++P+T+ EMATV+
Sbjct: 280 SWDDSSSNDFKRLRDNDGSVYSSLNILENQSGNSGNRITSLTHHLSLPKTAGEMATVEKF 339
Query: 280 LNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDL 339
L + SVPCKIRAKRG ATHPRSIAER RRTRIS +++KLQDL PNMDKQT+ +DMLDL
Sbjct: 340 LQF-QGSVPCKIRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDL 398
Query: 340 AVQHIKGLQNQVENLHKDLEHCTCGCK 366
AV++IK LQ QV+ L CTC K
Sbjct: 399 AVEYIKDLQKQVKTLKDTKAKCTCPSK 425
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 193/375 (51%), Gaps = 51/375 (13%)
Query: 29 GLTRYVSAPGSLLRTAVD--SI-IGSSSPSPSPSQPSIVSSS-----------HSHQHHH 74
GL RY SAP SLL + VD S+ + SSS ++S S H+
Sbjct: 42 GLMRYQSAPSSLLGSFVDGSSVHLQSSSHETETMFARLMSGSSDSQGLQGVGAMKHEEEV 101
Query: 75 YFAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAAS- 133
G + S + + T V++S +P N +S S + R +
Sbjct: 102 MVEGVPQQNGYSNGSQMIYNSQPMQTISVHNSASPRTNMESSFMTSMAAENSMKIRNENC 161
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSS---GGLGVSRLKSQLSFTGQ 190
SSL+RQ SSP G + SE GF+ TRE GN + G S+ VSRL +Q+SF+
Sbjct: 162 SSLVRQSSSPPGLFPNLTSEN-GFTPTREMGNLRA-GNSTNVEANPSVSRLNNQISFSSG 219
Query: 191 DS-----LSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKR 245
S L +ISE I S G + + Y ++F DSW + +P S
Sbjct: 220 LSSCNGLLPKISEIRNENIGLHSPKDGNNSNSRCY-ISNFTTDSWSD-------SPFSGL 271
Query: 246 TKTL---DGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVP 288
T+ D +F+ LN+L++Q ++P+ ++ T++ L+ +DSVP
Sbjct: 272 TRMAADNDLKMFSGLNSLEAQNVDSRYRSLGLTHHLSLPKNFPQITTIEKFLHF-QDSVP 330
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
CKIRAKRGCATHPRSIAER RRTRIS +++KLQ+L PNMDKQT+ +DMLDLAV++IK LQ
Sbjct: 331 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQ 390
Query: 349 NQVENLHKDLEHCTC 363
QV+ L+ CTC
Sbjct: 391 KQVKTLNDTKVKCTC 405
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 130/209 (62%), Gaps = 23/209 (11%)
Query: 180 RLKSQLSFTGQDSLSQISEES-------ENGIDGVSSGSGRQNATHS------YSTASFG 226
RL SQ SF+ QD L QISE E+ + G S A H S+ +F
Sbjct: 24 RLSSQWSFSRQD-LPQISEMGGLIPDIGESIVTGGGGNSSSDGAGHGAQSSSFLSSRNFS 82
Query: 227 MDSWENGTSIVFSAPPSKRTKTLD--------GDIFNCLNALDSQFTM-PQTSLEMATVD 277
M SW++ SI+FS P S + + D+ + + +DSQF + Q+SLEMA +D
Sbjct: 83 MSSWDDTNSIMFSPPSSSKKARVAAAAAGDHGDDMVSSFSNIDSQFGLSKQSSLEMAGMD 142
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
+ L + DSV C+ RAKRGCATHPRSIAERERRTRIS++LKKLQDLVPNMDKQT+ SDML
Sbjct: 143 DFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDML 202
Query: 338 DLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
D+AV +IK LQ QVE L D +CTC K
Sbjct: 203 DIAVTYIKELQGQVEKLKHDQANCTCSGK 231
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 144/255 (56%), Gaps = 29/255 (11%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLG--VSRLKSQLSFTG-- 189
SSL+RQ SSPAG SH + + G+++ R GN+ +G + SRLK Q+SF+
Sbjct: 143 SSLVRQSSSPAGLFSHLSGQN-GYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGL 201
Query: 190 QDSLSQISEESENGIDGVSSGS------GRQNATHSYSTASFGMDSWENGTSIV-FSAPP 242
SL + + SE G + + + S N + + F SW + FS
Sbjct: 202 PSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPYGSWNDSAHFENFSG-- 259
Query: 243 SKRTKTLDGDIFNCLNA--------------LDSQFTMPQTSLEMATVDNLLNIPEDSVP 288
KR + DG +++ N L ++P+TS EMA ++ L +DSVP
Sbjct: 260 MKRDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQF-QDSVP 318
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
CKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV++IK LQ
Sbjct: 319 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQ 378
Query: 349 NQVENLHKDLEHCTC 363
Q L + HC C
Sbjct: 379 KQYNTLTDNRAHCKC 393
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 144/255 (56%), Gaps = 29/255 (11%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLG--VSRLKSQLSFTG-- 189
SSL+RQ SSPAG SH + + G+++ R GN+ +G + SRLK Q+SF+
Sbjct: 132 SSLVRQSSSPAGLFSHLSGQN-GYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGL 190
Query: 190 QDSLSQISEESENGIDGVSSGS------GRQNATHSYSTASFGMDSWENGTSIV-FSAPP 242
SL + + SE G + + + S N + + F SW + FS
Sbjct: 191 PSSLGLLPQISEIGSECIQASSPNDRKLANSNGDARFYSPGFPYGSWNDSAHFENFSG-- 248
Query: 243 SKRTKTLDGDIFNCLNA--------------LDSQFTMPQTSLEMATVDNLLNIPEDSVP 288
KR + DG +++ N L ++P+TS EMA ++ L +DSVP
Sbjct: 249 MKRDQDNDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQF-QDSVP 307
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
CKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV++IK LQ
Sbjct: 308 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQ 367
Query: 349 NQVENLHKDLEHCTC 363
Q L + HC C
Sbjct: 368 KQYNTLTDNRAHCKC 382
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/240 (45%), Positives = 143/240 (59%), Gaps = 22/240 (9%)
Query: 136 LLRQRSSPAGFLSHFASET-------VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFT 188
L+RQ SSPAGFL+H + G + G+ + SSG G SRLK QLSF+
Sbjct: 143 LIRQSSSPAGFLNHLNMDNGYESMLRAGMGMGFRNGSTPAAVDSSGS-GGSRLKGQLSFS 201
Query: 189 GQDS--LSQISEESENGIDGVS---SGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPS 243
+ +SQISE + G S +G GR Y +S WE + + +
Sbjct: 202 SRQGSLMSQISEMGSEDLGGSSPEAAGGGR-GYMPGYPMSS----GWEESSLMSENMSGM 256
Query: 244 KRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRS 303
KR + N L QF++P+TS EMA ++ L +D+VPCKIRAKRGCATHPRS
Sbjct: 257 KRPRDSSEP---AQNGLAHQFSLPKTSSEMAAIEKFLQF-QDAVPCKIRAKRGCATHPRS 312
Query: 304 IAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
IAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ QV+ +++ +CTC
Sbjct: 313 IAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRANCTC 372
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/241 (42%), Positives = 146/241 (60%), Gaps = 13/241 (5%)
Query: 128 QTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSF 187
+ + S+L RQ SSPAG + + +T G++ + GNY +SG + RLKSQLSF
Sbjct: 117 EAKRVDSNLARQSSSPAGLFGNLSVQT-GYATMKGMGNYARVNGTSGEVS-PRLKSQLSF 174
Query: 188 TGQ--DSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKR 245
+ SLS +S+ SE G + + G N + +S GM + FSA
Sbjct: 175 PSRIPSSLSMLSQISEIGSESIGFPYGSWNDS-PFSENFNGMKRDPDDNGKPFSA----- 228
Query: 246 TKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIA 305
+G++ N ++ L ++P+ S++M ++ L+ +DSVPCKIRAKRGCATHPRSIA
Sbjct: 229 --AQNGELGNRVHLLSHHLSLPKASVDMVAMEKFLHF-QDSVPCKIRAKRGCATHPRSIA 285
Query: 306 ERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC 365
ER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ Q + L + +C C
Sbjct: 286 ERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSDNRANCKCLS 345
Query: 366 K 366
K
Sbjct: 346 K 346
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 185/354 (52%), Gaps = 50/354 (14%)
Query: 27 SGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHH------------- 73
S GL RY SAP ++L + + S+S + SP V S +HH
Sbjct: 20 SSGLLRYRSAPSTVLGDLCEDFLPSASGAASPDN---VFSRFLAEHHTRDDKPSPPPPAA 76
Query: 74 -HYFAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAA 132
H+ + + S + V + KSGL R+ ++I +T AA
Sbjct: 77 VHFPSEADMASQQQQQMMFHSHHHQQQQQMVGA--------KSGLYRTVS-SDI-ETAAA 126
Query: 133 -----SSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSF 187
+S+L+RQ SSPAGFL H + G+ G + + G SRLK QLSF
Sbjct: 127 VGTGGASNLIRQSSSPAGFLDHLNMDN-GYGAMLRAGMATADSLAGSG---SRLKGQLSF 182
Query: 188 TGQDS--LSQISEESENGIDGVS---SGSGRQNATHSYSTASFGMDSWENGTSIV---FS 239
+ + +SQISE + G S +G GR Y S WE+ ++++ S
Sbjct: 183 SSRQGSLMSQISEMDSEEVGGSSPEAAGGGR-GYIPGYPMGSGS--GWEDSSALMSDNLS 239
Query: 240 APPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCAT 299
R + G + + + QF++P+TS EMA++D L +D+VPCKIRAKRGCAT
Sbjct: 240 GLKRPRDSSEPGQ--SVQSRITHQFSLPKTSSEMASIDKFLQF-QDAVPCKIRAKRGCAT 296
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
HPRSIAER RRT+IS +++KLQ+LVPNMDKQT+ SDMLDLAV +IK LQ QV+N
Sbjct: 297 HPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQVKN 350
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 170 bits (431), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/273 (42%), Positives = 157/273 (57%), Gaps = 31/273 (11%)
Query: 116 GLQRSYGLN-EIPQTRAASSSLLRQRSSPAGFLSH----FASETVGFSVTRETGNYNSQG 170
GL S G+N E PQ SSLLR +SPAG S+ F + GF+ + GNY
Sbjct: 106 GLVGSMGMNHETPQN-GLGSSLLRHSTSPAGLFSNNNINFQN---GFATMKGVGNYGGVN 161
Query: 171 RSSGGLG--VSRLKSQLSFTGQDS-----LSQISEESENGIDGVSSGSGRQ---NATHSY 220
S+G L ++ LK+Q+SF+ +++ LSQISE I+ S + N T Y
Sbjct: 162 GSNGELSPCINGLKNQVSFSPRNASSLGMLSQISEIGNEDIEATSPDDDTRHEGNDTQQY 221
Query: 221 STASFGMDSWENGTSIVFSAPPSKRTKT----------LDGDIFNCLNALDSQFTMPQTS 270
F SW + + + KR ++ +G++ N +N L ++P+TS
Sbjct: 222 GPG-FPYGSWNDTPQLSENLSGLKRGRSSNEKMFSDEIQNGELGNQVNMLSHHLSLPKTS 280
Query: 271 LEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQ 330
EM T+ LL P DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQ
Sbjct: 281 AEMITMKKLLQFP-DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQ 339
Query: 331 TSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
T+ +DMLDLAV++IK LQ Q + L + C C
Sbjct: 340 TNTADMLDLAVEYIKDLQKQFKTLSEKRAKCEC 372
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 116/166 (69%), Gaps = 10/166 (6%)
Query: 207 VSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLD--------GDIFNCLN 258
++ G G Q+++ S+ +F M SW++ SI+FS P S + + D+ + +
Sbjct: 1 MAPGHGAQSSSF-LSSRNFSMSSWDDTNSIMFSPPSSSKKARVAAAAAGDHGDDMVSSFS 59
Query: 259 ALDSQFTM-PQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKL 317
+DSQF + Q+SLEMA +D+ L + DSV C+ RAKRGCATHPRSIAERERRTRIS++L
Sbjct: 60 NIDSQFGLSKQSSLEMAGMDDFLQLQPDSVACRARAKRGCATHPRSIAERERRTRISKRL 119
Query: 318 KKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
KKLQDLVPNMDKQT+ SDMLD+AV +IK LQ QVE L D +CTC
Sbjct: 120 KKLQDLVPNMDKQTNTSDMLDIAVTYIKELQGQVEKLKHDQANCTC 165
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 145/273 (53%), Gaps = 57/273 (20%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV--------------- 178
S+L+RQ SSPAGFL HF+ + Y + R+S G+G
Sbjct: 131 SNLIRQSSSPAGFLDHFSMDN----------GYGAMLRASMGMGFRDGSGGVGGAGGAAT 180
Query: 179 --------------SRLKSQLSFTGQDS--LSQISEESENGIDGVS---SGSGRQNATHS 219
RLK QLSF+ + +SQISE I G S + GR
Sbjct: 181 DSLAGGGGGGGSGSGRLKGQLSFSSRQGSLMSQISEMDSEEIGGSSPEAAAGGRGGYIPG 240
Query: 220 YSTASFGMDSWENGTSIVFSAPPSKRTKTLDG---------DIFNCLNALDSQFTMPQTS 270
Y +S G W++ +S + S S + D N L QF++P+TS
Sbjct: 241 YPMSSAG---WDDSSSALMSDSLSGMKRPRDSSEPGGQQQQQQQNGGGGLAHQFSLPKTS 297
Query: 271 LEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQ 330
EMA ++ L +D+VPCKIRAKRGCATHPRSIAER RRT+IS +++KLQ+LVPNMDKQ
Sbjct: 298 SEMAAIEKFLQF-QDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQ 356
Query: 331 TSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
T+ SDMLDLAV +IK LQ QV+ L++ CTC
Sbjct: 357 TNTSDMLDLAVDYIKDLQKQVKALNESRASCTC 389
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 150/271 (55%), Gaps = 42/271 (15%)
Query: 124 NEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNY-----NSQGRSSGGLGV 178
N++ R +SSSL+R SSPAG S+ +T G++ R G N+ +
Sbjct: 150 NQMKTGRGSSSSLIRHGSSPAGLFSNINIDT-GYAAVRGMGTMGAAAANNTTEEANFSPA 208
Query: 179 SRLKSQLSFT----------GQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMD 228
+R+K+ +F+ G S +Q + E+E G + G + + A F +
Sbjct: 209 TRMKNATNFSSGLMSSRPGIGNKSNTQNNAENE----GFAESQGNE-----FIPAGFPVG 259
Query: 229 SWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQ----------------FTMPQTSLE 272
W++ + + KR + D F+ LNA +SQ ++P TS E
Sbjct: 260 PWDDSAIMSDNMTGLKRFRDEDVKPFSGLNAPESQNETGGQQPSSSALAHQLSLPNTSAE 319
Query: 273 MATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTS 332
MA ++ L + DSVPCKIRAKRGCATHPRSIAER RRT+IS +++KLQDLVPNMDKQT+
Sbjct: 320 MAAIEKFLQL-SDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTN 378
Query: 333 YSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
+DMLDLAV++IK LQNQVE L + CTC
Sbjct: 379 TADMLDLAVEYIKDLQNQVEALSDNRAKCTC 409
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 142/249 (57%), Gaps = 40/249 (16%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLG--VSRLKSQLSFTG-- 189
SSL+RQ SSPAG SH + + G+++ R GN+ +G + SRLK Q+SF+
Sbjct: 41 SSLVRQSSSPAGLFSHLSGQN-GYAIMRGVGNFRPGNVGNGEISPSTSRLKPQVSFSSGL 99
Query: 190 QDSLSQISEESENGID-GVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKT 248
SL + + SE G D G GS +A +EN + + KR +
Sbjct: 100 PSSLGLLPQISEIGSDPGFPYGSWNDSA------------HFENFSGM-------KRDQD 140
Query: 249 LDGDIFNCLNA--------------LDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAK 294
DG +++ N L ++P+TS EMA ++ L +DSVPCKIRAK
Sbjct: 141 NDGKLYSGSNTSGIRNEEFGHRSQILSHHLSLPKTSAEMAAMEKFLQF-QDSVPCKIRAK 199
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
RGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV++IK LQ Q L
Sbjct: 200 RGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQYNTL 259
Query: 355 HKDLEHCTC 363
+ HC C
Sbjct: 260 TDNRAHCKC 268
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 163/293 (55%), Gaps = 34/293 (11%)
Query: 105 SSNAPG--NNTKSGLQRSYGLNEIPQTRAA---SSSLLRQRSSPAGFLSHFASETVGFSV 159
+S APG N+ S + S G+++ Q + +S+L+R SSPAG SH E G+++
Sbjct: 5 NSAAPGTVENSYSAVS-SMGMDQSQQIKIGGGNNSNLIRHSSSPAGLFSHLNVEN-GYAI 62
Query: 160 TRETGNYNSQGRSSGG---LGVSRLKSQLSFTGQDS-----LSQISEESENGIDGVSSGS 211
R GN+ S ++G SRLK Q++F+ ++ ISE + S +
Sbjct: 63 MRGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMGTGSPDN 122
Query: 212 GRQNATHSYS---TASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQ----- 263
G HS S F + SW++ + S K + + F+ LNA ++Q
Sbjct: 123 GSFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEAQKGEPA 182
Query: 264 ---------FTMP-QTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRI 313
++P +TS ++ T++ L +DSVPCKIRAKRGCATHPRSIAER RRTRI
Sbjct: 183 NRPPVLAHHLSLPTKTSADLTTIEKYLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRI 241
Query: 314 SRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
S +++KLQ+LVPNMDKQT+ SDMLDLAV +IK LQ QV+ L + CTC K
Sbjct: 242 SERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVKTLSDNRAKCTCSNK 294
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 165/310 (53%), Gaps = 50/310 (16%)
Query: 74 HYFAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEIPQTRAAS 133
H G++ + G +S S+F+ S NS A +T++G
Sbjct: 135 HNLVKGNSVSVG--NSLDSAFSVMNSMDLENSKQATKMSTRNG----------------- 175
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGL--GVSRLKSQLSFT-GQ 190
S+L RQ SSPAG LS+ + GF+V R G++ + ++G SRL+S ++F+ G
Sbjct: 176 SNLARQNSSPAGILSNHGVDN-GFAVMRNAGSFRAGNGTNGEATPSTSRLRSHVNFSSGH 234
Query: 191 DSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLD 250
+L QI+E E I G S + Y+ F D+W + + R K D
Sbjct: 235 RTLPQIAEIGEECIGGSSPEGDFSKRKYMYN---FNSDTWGDAS----------RLKDND 281
Query: 251 GDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRG 296
G++F+ LN +SQ ++P+T EMAT + L+ + VPCKIRAKRG
Sbjct: 282 GNMFSGLNRRESQVGNSGNRMTGLTHHLSLPKTVAEMATAEKFLDFQGNFVPCKIRAKRG 341
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
ATHPRSIAER RRTRIS +++KLQ+L P+MDKQTS +D LDL+++ IK LQ QV++L
Sbjct: 342 FATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQVKSLAD 401
Query: 357 DLEHCTCGCK 366
CTC K
Sbjct: 402 TKAKCTCSSK 411
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 152/262 (58%), Gaps = 30/262 (11%)
Query: 123 LNEIPQTRAASSSLLRQRSSPAGFLSHFASETV-GFSVTRETGNYNSQGRSSGGLGVSRL 181
L+++ + +S+L+R SSPAG S+ E G++V R G++ G SG S
Sbjct: 165 LSQMKPSAGNNSNLVRHSSSPAGLFSNINIEVENGYAVIRGMGDF---GTGSGETSYSTA 221
Query: 182 KSQLSFTGQDSLSQISE-----ESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSI 236
L +G+ +S I+E +N D G R N +Y T F + SW++ +
Sbjct: 222 GRPLPSSGR--MSPIAEIGNKNRGKNNPDSAGFGETRSN---NYVTG-FPIGSWDD--TA 273
Query: 237 VFSAPPSKRT---KTLDG---------DIFNCLNALDSQFTMPQTSLEMATVDNLLNIPE 284
V SA + T +TL G ++ N L ++P+TS E++ ++ L + +
Sbjct: 274 VMSAGLKRLTDDDRTLSGLNASENESGEVGNHPPMLAHHLSLPKTSAELSAIEKYLQL-Q 332
Query: 285 DSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHI 344
DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQDLVPNMDKQT+ SDMLDLAV +I
Sbjct: 333 DSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYI 392
Query: 345 KGLQNQVENLHKDLEHCTCGCK 366
K LQ QVE L ++ CTC K
Sbjct: 393 KDLQRQVETLSENRSKCTCASK 414
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 130/201 (64%), Gaps = 21/201 (10%)
Query: 180 RLKSQLSFTGQDSLSQISEES-----ENGIDGVSSGSGRQNAT-----HSYSTASFGMDS 229
++KS ++ + Q +LSQ SE+ N + G+ G +N T S+ST F + S
Sbjct: 33 KMKSPMNLSRQGALSQFSEDGIPNDLTNNVHGI--GHSEENITANNVARSFSTG-FSIGS 89
Query: 230 WENGTSIVFSAPPSKRTKTLDGDIFNCL-NALDSQFTMPQTSLEMATVDNLLNIPEDSVP 288
WE+ SIVFS P SK + DI + N+ + QF + + + LL + +D VP
Sbjct: 90 WEDPNSIVFSNPTSKAGIHNNDDIIASISNSYELQFGVAKETA------GLLQMQQDQVP 143
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
++RAKRGCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS +DMLDLAV HI+GLQ
Sbjct: 144 FRVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQ 203
Query: 349 NQVENLHKDLEHCTC-GCKPT 368
++++ L +D E CTC G +P+
Sbjct: 204 SELQALKEDKEKCTCRGNRPS 224
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 147/281 (52%), Gaps = 47/281 (16%)
Query: 120 SYGLNEIPQTRA---ASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGL 176
S G++ P+ R +S+L+RQ SSPAG H G++ R GN+ ++
Sbjct: 161 SIGIDLKPRIRTDGGRTSNLIRQSSSPAGLFDHIKINDSGYAALRGMGNFGTR------- 213
Query: 177 GVSRLKSQLSFTGQDSLSQISEES--------ENGIDGVSSGSGRQ----------NATH 218
S + SF+ L S+ + + + G+ S R+ + T
Sbjct: 214 --SSFNEEASFSSPSRLKNFSQRTLPPNSSGLMSPVVGIEKKSIRETNQDTKSFAESQTS 271
Query: 219 SYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDI--FNCLNALDSQ------------- 263
Y T SF + SWE+ + + K + D D ++ N D+Q
Sbjct: 272 DYGTTSFPVGSWEDSAVMSDNIVSQKPLEDNDDDEKSYSNFNISDTQKMDTGNRPPLLAH 331
Query: 264 -FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
++P TS EM ++ +L DSVPCK+RAKRGCATHPRSIAER RRT+IS +++KLQ+
Sbjct: 332 HLSLPNTSAEMNAIEKILQF-SDSVPCKLRAKRGCATHPRSIAERVRRTKISERMRKLQE 390
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ SDMLDLAV++IKGLQ QV+ L + C C
Sbjct: 391 LVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSDNRAKCKC 431
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 147/281 (52%), Gaps = 47/281 (16%)
Query: 120 SYGLNEIPQTRA---ASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGL 176
S G++ P+ R +S+L+RQ SSPAG H G++ R GN+ ++
Sbjct: 161 SIGIDLKPRIRTDGGRTSNLIRQSSSPAGLFDHIKINDSGYAALRGMGNFGTR------- 213
Query: 177 GVSRLKSQLSFTGQDSLSQISEES--------ENGIDGVSSGSGRQ----------NATH 218
S + SF+ L S+ + + + G+ S R+ + T
Sbjct: 214 --SSFNEEASFSSPSRLKNFSQRTLPPNSSGLMSPVVGIXEKSIRETNQDTKSFAESQTS 271
Query: 219 SYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDI--FNCLNALDSQ------------- 263
Y T SF + SWE+ + + K + D D ++ N D+Q
Sbjct: 272 DYGTTSFPVGSWEDSAVMSDNIVSQKPLEDNDDDEKSYSNFNISDTQKMDTGNRPPLLAH 331
Query: 264 -FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
++P TS EM ++ +L DSVPCK+RAKRGCATHPRSIAER RRT+IS +++KLQ+
Sbjct: 332 HLSLPNTSAEMNAIEKILQF-SDSVPCKLRAKRGCATHPRSIAERVRRTKISERMRKLQE 390
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ SDMLDLAV++IKGLQ QV+ L + C C
Sbjct: 391 LVPNMDKQTNTSDMLDLAVEYIKGLQKQVQTLSDNRAKCKC 431
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 129/199 (64%), Gaps = 19/199 (9%)
Query: 180 RLKSQLSFTGQDSLSQISE-----ESENGIDGVSSGSGRQNATHSYS----TASFGMDSW 230
++KS L+ + Q +LSQ SE + N + G+ G ++N T + T+ F + SW
Sbjct: 30 KMKSPLNLSKQGALSQFSEHGFSDDLTNNVHGI--GHSKENITTNNVSRPFTSGFSIGSW 87
Query: 231 ENGTSIVFSAPPSKRTKTLDGDIF-NCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPC 289
E+ SI FS +K + DI N N+ + QF + + EMA LL + +D VP
Sbjct: 88 EDSNSIEFSNLANKTGIHNNDDIIDNISNSYELQFGVAK---EMA---GLLQMQQDQVPF 141
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RAKRGCATHPRSIAERERRTRIS KL+KLQ LVPNMDKQTS +DMLDLAV HI+GLQN
Sbjct: 142 RVRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQN 201
Query: 350 QVENLHKDLEHCTC-GCKP 367
+++ L KD E C+C G +P
Sbjct: 202 ELQALKKDKEKCSCRGNRP 220
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/287 (39%), Positives = 160/287 (55%), Gaps = 51/287 (17%)
Query: 109 PGNNTKSGLQR----SYGLNEIPQTRAASSS---LLRQRSSPAGFLSHFASE-TVGFSVT 160
P +N SG+ S GL +P + +S + L+R SSPAG S+ E G++V
Sbjct: 149 PDHNPGSGMNHRSTNSTGLERMPSMKPSSGNNPNLVRHSSSPAGLFSNINIEFENGYAVL 208
Query: 161 RETGN---------YNSQGRSSGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGS 211
R+ G+ Y++ GR G+ +S ++ G ++ + S +S G G + G+
Sbjct: 209 RDVGDLGAGNRDTTYSAAGRPPSSSGI---RSTIAEMGNKNMGENSPDS--GGFGETPGN 263
Query: 212 GRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQ-------- 263
+ + SW++ S V S SKR T D + LN+ ++Q
Sbjct: 264 ----------NYDYPIGSWDD--SAVMSTG-SKRYLTDDDRTLSGLNSSETQQNEEAGNR 310
Query: 264 -------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRK 316
++P+TS EM+T++N L +DSVPCKIRAKRGCATHPRSIAER RRTRIS +
Sbjct: 311 PPMLAHHLSLPKTSAEMSTIENFLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRISER 369
Query: 317 LKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
++KLQDLVPNMDKQT+ SDMLDLAV +IK LQ Q + L ++ CTC
Sbjct: 370 MRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQFKALSENRARCTC 416
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 132/233 (56%), Gaps = 20/233 (8%)
Query: 143 PAGFLSHFASET-------VGFSVTRETGNYNSQGR-SSGGLGVSRLKSQLSFTGQDS-- 192
PAGFL+H + G V G N+ S G G RLK QLSF+ +
Sbjct: 155 PAGFLNHLNMDNGYESMLRQGMGVGFRNGATNAAAAVDSSGSGGGRLKGQLSFSSRQGSL 214
Query: 193 LSQISEESENGIDGVS--SGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLD 250
+SQISE + G S G + Y +S WE + + + KR +
Sbjct: 215 MSQISEMGSEDLGGSSPEGAGGSRGYIPGYPMSS----GWEESSLMSENMSGMKRPRDSS 270
Query: 251 GDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERR 310
N L QF++P+TS EMA ++ L +D+VPCKIRAKRGCATHPRSIAER RR
Sbjct: 271 EP---AQNGLAHQFSLPKTSSEMAAIEKFLQF-QDAVPCKIRAKRGCATHPRSIAERVRR 326
Query: 311 TRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
TRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ QV+ +++ CTC
Sbjct: 327 TRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQVKVINESRASCTC 379
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 139/242 (57%), Gaps = 15/242 (6%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGF-SVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ-- 190
S+L+RQ SSPAG LS G S +R +GN N G +RL SQ+SF+
Sbjct: 116 SNLVRQSSSPAGVLSQLNQNGYGGGSFSRLSGNNN--GVEVVSPSSNRLNSQISFSSLVP 173
Query: 191 DSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKR----T 246
SL + SE + + T ++ + F SW + + P KR
Sbjct: 174 SSLGMFPQISEQVVGNEKLSNSNNGETQFFTPSGFPFASWNESSQFSETFPGIKRDPDSN 233
Query: 247 KTL-----DGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHP 301
K +G+I N ++ L ++P+ ++A+++ LL + +D+VPC+IRAKRGCATHP
Sbjct: 234 KKFSSGHQNGEIGNRVHLLSHHLSLPKNVSDVASIEKLLQL-QDAVPCRIRAKRGCATHP 292
Query: 302 RSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHC 361
RSIAER RRTRIS +++KLQDLVPNMDKQT+ +DMLDLAV +IK LQ Q + L + +C
Sbjct: 293 RSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQFKTLSDNRANC 352
Query: 362 TC 363
C
Sbjct: 353 VC 354
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 182/392 (46%), Gaps = 68/392 (17%)
Query: 27 SGGLTRYVSAPGSLLRTAVDSIIGSSSP--------------SPSPSQPSIVSSSHSHQH 72
SGGL RY SAP SL + VD G +S S SP I+S + +
Sbjct: 40 SGGLMRYCSAPTSLFASLVDGTEGFNSSNNGGGTREDYRFIRSSSPEVEVILSRFMASCN 99
Query: 73 HHYFAG-GSTTTAGGDSSPV----------SSFTTTESTCKVNSSNAPGNNTKSGLQRSY 121
+ +G G T PV SS T S AP N+ G+ S
Sbjct: 100 GKFDSGSGERTVKEETGEPVQQQNGFCNQPSSMVNTRSVDA--GGRAPVGNSY-GVMNSS 156
Query: 122 GLNEIPQTRAAS---SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSS--GGL 176
+ Q++ + S+L RQ SSPAGF SH +E + TRE + + R
Sbjct: 157 DFDNSMQSQLGARNCSNLFRQSSSPAGFFSHLIAENG--NTTREVDKFGTCNRKDVDAAY 214
Query: 177 GVSRLKSQLSFTGQ----DSLSQISEESENGIDGVSSGSGRQ--NATHSYSTASFGMDSW 230
+R+ SQ++ +G + + I+EE I V S RQ N+ T F SW
Sbjct: 215 PSTRIGSQMNLSGHSFGSNHMPPIAEEENKSIGIVGSSRHRQKANSGDRLQTDDFLNSSW 274
Query: 231 EN-----------------GTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEM 273
+N TSIV +T + D N + L ++P S
Sbjct: 275 DNSAMRDTKRGRDNNGRAFATSIVL--------ETQNADSGNNIRGLAHHLSLP-ISFNK 325
Query: 274 ATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
V+ L E VP +IRAKRGCATHPRSIAER RRTRIS ++KKLQ+L P+MDKQTS
Sbjct: 326 DPVEKFLRFQE-PVPHQIRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTST 384
Query: 334 SDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC 365
+DML+LAV++IKGLQ QV+ L CTC C
Sbjct: 385 ADMLELAVEYIKGLQRQVKTLTDTKAKCTCSC 416
>gi|414879182|tpg|DAA56313.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 323
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 174/346 (50%), Gaps = 68/346 (19%)
Query: 16 MGPTTAAGVGGSGGLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQHHHY 75
M P +A G G L RY SAPGSLL DS+ P VS +S +
Sbjct: 12 MRPPSAQGQG----LARYGSAPGSLLAAIADSVTRGDPAPPP----PPVSRFYSAES--- 60
Query: 76 FAGGSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYG----LNEIPQTR- 130
S T+ +S+C+ + P L+R+YG + P +
Sbjct: 61 ----------------SGLTSCDSSCRTDCGRPP-------LERAYGGSGEIRVPPPLQQ 97
Query: 131 --------AASSSLLRQRSSPAGFLSHFASETVGFSVTR-ETGNYNSQGRSSG-----GL 176
A+S L R SSPAG LS ++ G + + G+Y G + G
Sbjct: 98 QQHHLLAPPAASPLFRHSSSPAGLLSRLMTDPHGMAASGGAMGSYTQAGSDAALGPGHGH 157
Query: 177 GVSRLKSQLSFTGQDSLSQISE---------ESENGIDGVSSGSGRQNATHSYSTASFGM 227
G ++L SQ SF+ QD L QISE ES G G +S S + SY + +F +
Sbjct: 158 GHAQLSSQWSFSRQD-LPQISEMGMIPADIGESIVGAGGCNSSS-DAAQSSSYLSRTFSV 215
Query: 228 DSWENGTSIVFSAPPSKRTKTLDG----DIFNCLNALDSQFTMPQTSLEMATVDNLLNIP 283
SW++ SI+FS+ P K+ K D+ + +D QF + +SLE+ +D+ L +
Sbjct: 216 GSWDDTNSIMFSSAPCKKPKVDPAAGADDMVTNFSTIDPQFGLSNSSLELPGMDDYLQLQ 275
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK 329
+DSV C++RA+RGCATHPRSIAERERRTRIS++LKKLQDLVPNMDK
Sbjct: 276 QDSVACRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDK 321
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/117 (64%), Positives = 92/117 (78%), Gaps = 3/117 (2%)
Query: 252 DIFNCLNALDSQFT--MPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERER 309
DI L A D QF+ M T+LEMA +D + + +D VP K+RAKRGCATHPRSIAERER
Sbjct: 221 DIITTLGAYDPQFSGAMAGTALEMAGMDRYMQLQQDQVPFKVRAKRGCATHPRSIAERER 280
Query: 310 RTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
RTRIS KL+KLQDLVPNMDKQTS +DMLDLAV+HIKGLQ++++ L + E CTC C+
Sbjct: 281 RTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSELQALKHEQEKCTC-CR 336
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 150/270 (55%), Gaps = 31/270 (11%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNY---NSQGRS 172
GL S + Q S+ RQ SSPAG + +V GNY N R
Sbjct: 89 GLIGSISIGHHEQVEKVDSNPARQNSSPAGLFGNL-------TVQNGVGNYSGLNGTNRE 141
Query: 173 SGGLGVSRLKSQLSFTGQ-----DSLSQISEESENGIDGVSSGSGRQNA----THSYSTA 223
+ RL+SQLSF+ + LSQISE ++ S SG+ ++ + YS+
Sbjct: 142 AS----PRLQSQLSFSSRVPSSLGLLSQISEIGSESMEAGSPDSGKLSSVSVDSRFYSSH 197
Query: 224 SFGMDSWENG-TSIVFSAPPSKR------TKTLDGDIFNCLNALDSQFTMPQTSLEMATV 276
F SW + S FS+ ++ + +G++ N + L ++P+T++EM +
Sbjct: 198 GFPYGSWNDSHLSENFSSMKREQENGNLFSNAQNGELGNRAHVLSHHLSLPKTAMEMVAM 257
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
+ L+ +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DM
Sbjct: 258 EKFLHF-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADM 316
Query: 337 LDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
LDLAV +IK LQ Q + L + +C C K
Sbjct: 317 LDLAVVYIKDLQKQYKTLSDNRANCKCLSK 346
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/246 (41%), Positives = 136/246 (55%), Gaps = 19/246 (7%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVS---RLKSQLSFTGQ 190
S+L R SSPAG S E V ++ R G+ + S S RLK+Q +++
Sbjct: 163 SNLTRHSSSPAGLFSQINIENV-YAGVRGMGSLGAVNNSIEDAKFSSSRRLKNQPNYSSS 221
Query: 191 DSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLD 250
+S I+E + G SS A + A F + W++ + + KR D
Sbjct: 222 GRMSSIAEIGDKGYRE-SSPDSEAFADGNDFMAGFQVGHWDDTAMMSDNVGGLKRFSEED 280
Query: 251 GDIFNCLNALDSQ-------------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGC 297
F+ LNA+++Q ++P TS EMA ++ L DSVPCKIRAKRGC
Sbjct: 281 SKPFSGLNAVETQNETGQTHAPLAHQLSLPNTSAEMAAIEKFLQF-SDSVPCKIRAKRGC 339
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
ATHPRSIAER RRT+IS +++KLQDLVPNMDKQT+ +DMLDLAV +IK LQ QV+ L
Sbjct: 340 ATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDC 399
Query: 358 LEHCTC 363
CTC
Sbjct: 400 HAKCTC 405
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 161/292 (55%), Gaps = 37/292 (12%)
Query: 106 SNAPG--NNTKSGLQRSYGLNEIPQTRAA---SSSLLRQRSSPAGFLSHFASETVGFSVT 160
S APG N+ S + S G+++ Q + +S+L+R SSPAG SH E G+++
Sbjct: 149 SAAPGTVENSYSAVS-SMGMDQSQQXKIGGGNNSNLIRHSSSPAGLFSHLNVEN-GYAIM 206
Query: 161 RETGNYNSQGRSSGGLGVS---RLKSQLSFTGQDS-----LSQISEESENGIDGVSSGSG 212
R GN+ S ++G S RLK Q++F+ ++ ISE + S +G
Sbjct: 207 RGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMGTGSPDNG 266
Query: 213 RQNATHSYS---TASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQ------ 263
HS S F + SW++ + S K + + F+ LNA ++Q
Sbjct: 267 SFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEAQKGEPAN 326
Query: 264 --------FTMP-QTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRIS 314
++P +TS ++ T++ L +DSVPCKIRAKRGCATHPRSIAER RRTRIS
Sbjct: 327 RPPVLAHHLSLPTKTSADLTTIEKYLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRIS 385
Query: 315 RKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
+++KLQ+LVPNMDKQT+ SDMLDLAV +IK LQ QV+ ++ + CK
Sbjct: 386 ERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQVK---RNRKKAAIKCK 434
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 136/251 (54%), Gaps = 21/251 (8%)
Query: 136 LLRQRSSPAGFLSHFASETVGFSVTR------------ETGNYNSQGRSSGGLGVSRLKS 183
LLRQ SSPAGFL+H + S+ R G + S G RLK
Sbjct: 144 LLRQSSSPAGFLNHLNMDNGYGSMLRAGMAAAGGGVGFRNGANAAAAADSPGGSGGRLKG 203
Query: 184 QLSFTGQDS--LSQISE--ESENGIDGVSSGSGRQNATHSYSTASFGMDS-WENGTSIV- 237
QLSF+ + +SQISE E G G + + M S WE + +
Sbjct: 204 QLSFSSRQGSLMSQISEMDSEELGGSSPEGAGGGGGGGGRGYLSGYPMSSGWEESSLMSD 263
Query: 238 --FSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKR 295
S +R + L QF++P+TS EMA ++ L +D+VPCKIRAKR
Sbjct: 264 TNISGVKRQRDSSEPSQNGGGGGGLAHQFSLPKTSSEMAAIEKFLQF-QDAVPCKIRAKR 322
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
GCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ QV+ L+
Sbjct: 323 GCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLN 382
Query: 356 KDLEHCTCGCK 366
+CTC K
Sbjct: 383 DSRANCTCSAK 393
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 143/266 (53%), Gaps = 41/266 (15%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNY----NSQGR 171
GL + G+N T+ A S+LLRQ SSPAG ++ + + G+ R NY + R
Sbjct: 121 GLDQFLGMNNH-HTKPAESNLLRQSSSPAGMFTNLSDQN-GYGSMRSLMNYGGEEEDEDR 178
Query: 172 SSGGLGVSR--LKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDS 229
S G+ R S + LSQI E + N F +
Sbjct: 179 PSNSNGLRRHCSLSSRPLSSLGMLSQIPEIATN----------------------FQYNH 216
Query: 230 WENGTSIVFSAPPSKRTKTLDGDIFNC---------LNALDSQFTMPQTSLEMATVDNLL 280
W + +S + + KR D +FN + L ++P++S +MA+VD +
Sbjct: 217 WNDPSSFIDNLSSLKRETEDDAKLFNGAQNGESGNRMQLLSHHLSLPKSS-DMASVDKFM 275
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ +DSVPCK+RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ SDMLDLA
Sbjct: 276 QL-QDSVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLA 334
Query: 341 VQHIKGLQNQVENLHKDLEHCTCGCK 366
V +IK LQ Q + L+ + +C C K
Sbjct: 335 VDYIKDLQRQYKILNDNRANCKCKEK 360
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/247 (40%), Positives = 136/247 (55%), Gaps = 19/247 (7%)
Query: 133 SSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVS---RLKSQLSFTG 189
+S+L+R SSPAG S E V ++ R G + S S RLK+Q +++
Sbjct: 159 NSNLIRHSSSPAGLFSQINIENV-YAGVRGMGTLGAVNNSIEDAKFSSSRRLKNQPNYSS 217
Query: 190 QDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTL 249
+S I+E + G + SS A + F + W++ + + KR +
Sbjct: 218 SGRMSSIAEIGDKG-NRESSPDNEAFADGNDFITGFQVGHWDDAAIMSDNVGGLKRFREN 276
Query: 250 DGDIFNCLNA-------------LDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRG 296
D F+ LNA L Q ++P TS E+A ++ L DSVPCKIRAKRG
Sbjct: 277 DSKPFSGLNAAETQNETGQTHAPLAHQLSLPNTSAEIAAIEKFLQFS-DSVPCKIRAKRG 335
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
CATHPRSIAER RRT+IS +++KLQDLVPNMDKQT+ +DMLDLAV +IK LQ QV+ L
Sbjct: 336 CATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSD 395
Query: 357 DLEHCTC 363
CTC
Sbjct: 396 CHAKCTC 402
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 148/281 (52%), Gaps = 52/281 (18%)
Query: 124 NEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSV--------------TRETGNY--- 166
N++ +SS+L+R SSPAG S+ + G++ T E N+
Sbjct: 149 NQMKTGHGSSSNLIRHGSSPAGLFSNINIDITGYAAVVRGMGTMGAAANNTSEEANFSPA 208
Query: 167 ----NSQGRSSGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYST 222
N+ S GL SR + G S +Q + +EN +G + G + +
Sbjct: 209 TRMKNNAPNFSSGLMSSRAE-----VGNKSNTQ-NNNAEN--EGFAESQGNE-----FIP 255
Query: 223 ASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNC-LNALDSQ----------------FT 265
A F + W + + + KR + D F+ LNA +SQ +
Sbjct: 256 AGFPVGPWNDSAIMSDNVTGLKRFRDEDVKPFSGGLNAPESQNETGGQQPSSSALAHQLS 315
Query: 266 MPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVP 325
+P TS EMA ++ L + DSVPCKIRAKRGCATHPRSIAER RRT+IS +++KLQDLVP
Sbjct: 316 LPNTSAEMAAIEKFLQL-SDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVP 374
Query: 326 NMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
NMDKQT+ +DMLDLAV++IK LQNQV+ L + CTC K
Sbjct: 375 NMDKQTNTADMLDLAVEYIKDLQNQVQTLSDNRAKCTCSHK 415
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 146/254 (57%), Gaps = 35/254 (13%)
Query: 132 ASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV------------- 178
A+SSL+RQ SSPAGFL HF + Y + R+S G+G
Sbjct: 129 AASSLIRQSSSPAGFLDHFGMDN----------GYGAMLRASMGMGFQDGGASDSLAGGG 178
Query: 179 ---SRLKSQLSFTGQDS--LSQISE-ESENGIDGVSS--GSGRQNATHSYSTASFGMDSW 230
RL QLSF+ + +SQISE +S+ + G SS G +A +
Sbjct: 179 GGSGRLGGQLSFSSRQGSLMSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWD 238
Query: 231 ENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSL-EMATVDNLLNIPEDSVPC 289
++ ++++ + P+ + D L QF++P+TS E+A ++ L +D+VPC
Sbjct: 239 DSSSALLPDSLPATNKRPRDS--LEHGGGLAHQFSLPKTSSSEVAAIEKFLQF-QDAVPC 295
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RAKRGCATHPRSIAER RRT+IS +++KLQ+LVP+MDKQT+ SDMLDLAV +IK LQ
Sbjct: 296 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 355
Query: 350 QVENLHKDLEHCTC 363
QV+ L++ CTC
Sbjct: 356 QVKALNESRASCTC 369
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 142/261 (54%), Gaps = 27/261 (10%)
Query: 128 QTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLG----VSRLKS 183
Q + S+L+R SSPAG S+ +T GF+ R G + +S V RLK+
Sbjct: 175 QMKTGRSNLIRHGSSPAGLFSNINIDT-GFAAMRGIGTMGAANSTSKEANFSSSVVRLKN 233
Query: 184 QLSF-------TGQDSLSQISEESE--------NGIDGVSSGSGRQNATHSYSTASFGMD 228
++ G +S+ Q + E E + I G G+ ++ T S G+
Sbjct: 234 APNYASALGAEIGSNSIPQNNLEPEGFAETRGNDFIPGFPLGTTWED-TAMISDNITGLK 292
Query: 229 SWENGTSIVFSAP---PSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPED 285
+ + + P P++ G + L Q +MP T+ E+A ++ L D
Sbjct: 293 RYRDDDDVKPFPPGLNPAETKNETGGQTTSA--PLAHQMSMPNTTAELAAIEKFLQF-SD 349
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
SVPCKIRAKRGCATHPRSIAER RRT+IS +++KLQDLVPNMDKQT+ SDMLDLAV++IK
Sbjct: 350 SVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIK 409
Query: 346 GLQNQVENLHKDLEHCTCGCK 366
LQNQVE L + CTC K
Sbjct: 410 DLQNQVETLSDNRAKCTCSHK 430
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 146/254 (57%), Gaps = 35/254 (13%)
Query: 132 ASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV------------- 178
A+SSL+RQ SSPAGFL HF + Y + R+S G+G
Sbjct: 129 AASSLIRQSSSPAGFLDHFGMDN----------GYGAMLRASMGMGFQDGGASDSLAGGG 178
Query: 179 ---SRLKSQLSFTGQDS--LSQISE-ESENGIDGVSS--GSGRQNATHSYSTASFGMDSW 230
RL QLSF+ + +SQISE +S+ + G SS G +A +
Sbjct: 179 GGSGRLGGQLSFSSRQGSLMSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWD 238
Query: 231 ENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSL-EMATVDNLLNIPEDSVPC 289
++ ++++ + P+ + D L QF++P+TS E+A ++ L +D+VPC
Sbjct: 239 DSSSALLPDSLPATNKRPRDS--LEHGGGLAHQFSLPKTSSSEVAAIEKFLQF-QDAVPC 295
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RAKRGCATHPRSIAER RRT+IS +++KLQ+LVP+MDKQT+ SDMLDLAV +IK LQ
Sbjct: 296 KVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQK 355
Query: 350 QVENLHKDLEHCTC 363
QV+ L++ CTC
Sbjct: 356 QVKALNESRASCTC 369
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 138/255 (54%), Gaps = 26/255 (10%)
Query: 136 LLRQRSSPAGFLSHFASETVGFSVTR--------------ETGNYNSQGRSSGGLGVSRL 181
LLRQ SSPAGFL+H + S+ R G + S G RL
Sbjct: 145 LLRQSSSPAGFLNHLNMDNGYGSMLRAGMAAAGGGGGVGFRNGANAAAAADSPGGSGGRL 204
Query: 182 KSQLSFTGQDS--LSQISE--ESENGIDGVSSGSGRQNATHSYSTASFGMDS-WENGTSI 236
K QLSF+ + +SQISE E G G + + M S WE +S+
Sbjct: 205 KGQLSFSSRQGSLMSQISEMDSEELGGSSPEGAGGGGGGGGRGYLSGYPMSSGWEE-SSL 263
Query: 237 VFSAPPSKRTKTLDG-----DIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKI 291
+ S + D + L QF++P+TS EMA ++ L +D+VPCKI
Sbjct: 264 MSDTNISGVKRQRDSSEPSQNGGGGGGGLAHQFSLPKTSSEMAAIEKFLQF-QDAVPCKI 322
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLDLAV +IK LQ QV
Sbjct: 323 RAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQV 382
Query: 352 ENLHKDLEHCTCGCK 366
+ L+ +CTC K
Sbjct: 383 KGLNDSRANCTCSAK 397
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 145/281 (51%), Gaps = 34/281 (12%)
Query: 109 PGNNTKSGLQRSY--GLNEIPQTR---AASSSLLRQRSSPAGFLSHFASETVGFSVTRET 163
P N SGL S+ G+N + Q + +S+L+R SSPAG S E G+ R
Sbjct: 132 PNQNVSSGLDGSFSMGVNRLQQVKNHGGNNSNLIRHSSSPAGLFSQINIEN-GYVSMRGM 190
Query: 164 GNYNSQGRSSGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQN-------- 215
G + G + + ++ + S Q S S + ID V R+N
Sbjct: 191 G---TLGAVNNSMKEAKFSTARSLKNQ---SNYSSGLMSTIDEVGDKDNRENNLENEAFG 244
Query: 216 ATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDG-DIFNCLNA------------LDS 262
+H + +D+W++ + + KR + D F+ LN L
Sbjct: 245 ESHGNEYMDYPVDTWDDSEMMSENVGGLKRFRDNDSKQQFSGLNVQNETGGGHSNSPLAH 304
Query: 263 QFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
Q +MP TS EMA ++ L+ DSVP KIRAKRGCATHPRSIAER RRT+IS +++KLQD
Sbjct: 305 QLSMPNTSSEMAAMEKFLHF-SDSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQD 363
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ +DMLDLAV +IK LQ Q + L CTC
Sbjct: 364 LVPNMDKQTNTADMLDLAVDYIKDLQKQAQKLQDCQAKCTC 404
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 137/248 (55%), Gaps = 23/248 (9%)
Query: 135 SLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDS-- 192
SLLRQ SSPAGFL+H + + G++ G G G +RLK QLSF+ +
Sbjct: 153 SLLRQSSSPAGFLNHLSMDN-GYASMLRAGMAGGGGGGGYRNGDARLKGQLSFSSRQGSV 211
Query: 193 LSQISE-----ESENGIDGVSSGSGRQNATHSYSTASFGMDSWENG---------TSIVF 238
+SQISE G G +G Y + W+ TS
Sbjct: 212 MSQISEMVGEEMGGGGSSGDDDEAGSYGGIPGYPVVAPSGTGWDEPSPSPPPSLLTSDGM 271
Query: 239 SAPPSKRTKTLDGDIFNCLNALDSQFTMP---QTSLEMATVDNLLNIPEDSVPCKIRAKR 295
S P +KR + + L QF++P + S E+A ++ L +DSVPCKIRAKR
Sbjct: 272 SGPAAKRRPREAANGRS--GQLKPQFSLPAGSKPSPEIAAIEKFLQF-QDSVPCKIRAKR 328
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
GCATHPRSIAER RRT+IS +++KLQ+LVPNM+KQT+ SDMLDLAV +IK LQ QV+ ++
Sbjct: 329 GCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQVKVMN 388
Query: 356 KDLEHCTC 363
CTC
Sbjct: 389 DGRAGCTC 396
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 91/118 (77%), Gaps = 2/118 (1%)
Query: 252 DIFNCLNALDSQFT-MPQTS-LEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERER 309
DI + L +SQF M TS LEMA +D L + D VP K+RAKRGCATHPRSIAERER
Sbjct: 100 DIISTLGGYESQFGGMASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAERER 159
Query: 310 RTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKP 367
RTRIS KL+KLQ+LVPNMDKQTS +DMLDLAV+HIKGLQ+Q++ L + E CTC +P
Sbjct: 160 RTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTCCSRP 217
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 140/258 (54%), Gaps = 35/258 (13%)
Query: 131 AASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ 190
A ++SL+RQ SSPAGFL+H + G+ G R+ G+ +RLK QLSF+ +
Sbjct: 150 AGNNSLIRQSSSPAGFLNHLNMDN-GYGSMLRVGMGGGGFRN--GVSDARLKGQLSFSSR 206
Query: 191 DS--LSQISEESENGIDGVSSGSGRQNATHS--------------YSTASFGMDSWENGT 234
+SQISE +DG GSG A S Y +W +
Sbjct: 207 QGSVMSQISEVGSEELDG-GGGSGSPEAAGSNASGAARGYSGIPGYPMGGLASGAWPDEA 265
Query: 235 SIVFSAPPSKRTKTLD-GDIFNCLNALDSQFTMP--------QTSLEMATVDNLLNIPED 285
S +P S + D G L Q ++P S EMA ++ L +D
Sbjct: 266 S---PSPTSGAKRPRDSGPALQ--QPLAPQLSLPSGKNKGGRAASAEMAAIEKFLQF-QD 319
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
+VPCKIRAKRGCATHPRSIAER RRT+IS +++KLQ+LVPNM+KQT+ +DMLDLAV +IK
Sbjct: 320 AVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIK 379
Query: 346 GLQNQVENLHKDLEHCTC 363
LQ QV+ L+ CTC
Sbjct: 380 DLQKQVKVLNDGRASCTC 397
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 146/253 (57%), Gaps = 35/253 (13%)
Query: 136 LLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGR---SSGGL--GVSRLKSQLSFTGQ 190
L+RQ+SSPAGF S+++ + V G S G+ SS GL G L S+ S +
Sbjct: 186 LIRQKSSPAGFFSNYSVDNAMRDVASFRGCDVSNGQAITSSSGLHGGTLNLSSRPS-SCS 244
Query: 191 DSLSQISEESENGIDG--VSSGSGRQ---NATHSYSTASFGMDSWENGTSIVFSAPPSKR 245
+ QI+E G++G V S + R N+T Y SF D W+ G+S S R
Sbjct: 245 TRMPQIAENGNEGVEGNYVESRNLRNDNINSTKCY-MPSFTTDFWD-GSSF------SPR 296
Query: 246 TKTLDGDI-FNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVPCK 290
T + +G+I F+ NA+D Q ++P +S +AT++ I + SVPCK
Sbjct: 297 TASNNGEISFSTSNAMDIQGEDFGYQKVGLTHHSSLPGSSSRVATMEKFYQI-QGSVPCK 355
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
IRAKRG ATHPRSIAERERRTRIS ++KKLQDL P DKQTS +DMLDLAV++IK LQ Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 351 VENLHKDLEHCTC 363
V+ L CTC
Sbjct: 416 VKMLRDTRAKCTC 428
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 139/266 (52%), Gaps = 38/266 (14%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRS--- 172
GL + G+N T+ S+LLRQ SSPAG ++ + + G+ R NY S
Sbjct: 112 GLDQFLGINNH-HTKPVESNLLRQSSSPAGMFTNLSDQN-GYGSMRNLMNYEEDEESPSN 169
Query: 173 SGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWEN 232
S GL S + LSQI E + +F W +
Sbjct: 170 SNGLRRHCSLSSRPPSSLGMLSQIPEIA--------------------PETNFPYSHWND 209
Query: 233 GTSIVFSAPPSKRTKTLDGDIF---------NCLNALDSQFTMPQ---TSLEMATVDNLL 280
+S + + KR DG +F N + L ++P+ T+ +M +VD L
Sbjct: 210 PSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYL 269
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ SDMLDLA
Sbjct: 270 QL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLA 328
Query: 341 VQHIKGLQNQVENLHKDLEHCTCGCK 366
V +IK LQ Q + L+ + +C C K
Sbjct: 329 VDYIKDLQRQYKILNDNRANCKCMNK 354
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 138/236 (58%), Gaps = 35/236 (14%)
Query: 153 ETVGFSVTRETGNYNSQGRSS---GGLGVSRLKSQLSFTGQDS-----LSQISEESENGI 204
E+ GF+ TRE GN + G S+ VSRL +Q+SF+ S L +ISE I
Sbjct: 18 ESFGFTPTREMGNLRA-GNSTNVEANPSVSRLNNQISFSSGLSSCNGLLPKISEIRNENI 76
Query: 205 DGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTL---DGDIFNCLNALD 261
S G + + Y ++F DSW + +P S T+ D +F+ LN+L+
Sbjct: 77 GLHSPKDGNNSNSRCY-ISNFTTDSWSD-------SPFSGLTRMAADNDLKMFSGLNSLE 128
Query: 262 SQ--------------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAER 307
+Q ++P+ ++ T++ L+ +DSVPCKIRAKRGCATHPRSIAER
Sbjct: 129 AQNVDSRYRSLGLTHHLSLPKNFPQITTIEKFLHF-QDSVPCKIRAKRGCATHPRSIAER 187
Query: 308 ERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
RRTRIS +++KLQ+L PNMDKQT+ +DMLDLAV++IK LQ QV+ L+ CTC
Sbjct: 188 VRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQVKTLNDTKVKCTC 243
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 145/260 (55%), Gaps = 43/260 (16%)
Query: 134 SSLLRQRSSPAGFLSH---FASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ 190
S+L+RQ+SSPA F S+ FA+ T+ RE ++ + G S+G L S S
Sbjct: 166 SNLIRQKSSPAEFFSNENGFATLTL-----REVESFKANGISNGTLNFSSRPSTC----- 215
Query: 191 DSLSQISEESENGIDGVSSGSGRQ-NATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTL 249
L ++ + +ENGI + S + N + ++ F + W+N SA + +T+
Sbjct: 216 --LKRMPQIAENGIQSLESNCDQTINLVNENGSSKFTNEFWDN------SAFNAHKTENE 267
Query: 250 DGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKR 295
D +F+ N LDSQ ++P +S +M +++ L + + SVPCKIRAKR
Sbjct: 268 DEIMFSTTNGLDSQEADFGYQNLGLTHHLSLPSSSTKMTSMEKFLQV-QGSVPCKIRAKR 326
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G ATHPRSIAER RRTRIS ++KKLQ L P DKQTS +DMLDLAV++IK LQ QV+ L
Sbjct: 327 GFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQVQILT 386
Query: 356 KDLEHCTCG------CKPTS 369
+ C C CKP S
Sbjct: 387 DCKDKCKCASHEKKHCKPCS 406
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 139/266 (52%), Gaps = 38/266 (14%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRS--- 172
GL + G+N T+ S+LLRQ SSPAG ++ S+ G+ R NY S
Sbjct: 112 GLDQFLGINN-HHTKPVESNLLRQSSSPAGMFTNL-SDHNGYGSMRNMMNYEEDEESPSN 169
Query: 173 SGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWEN 232
S GL S + LSQI E + +F W +
Sbjct: 170 SNGLRRHCSLSSRPPSSLGMLSQIPEIA--------------------PETNFQYSHWND 209
Query: 233 GTSIVFSAPPSKRTKTLDGDIF---------NCLNALDSQFTMPQ---TSLEMATVDNLL 280
+S + + KR DG +F N + L ++P+ T+ +M +VD L
Sbjct: 210 PSSFIDNLSSLKRETEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYL 269
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ SDMLDLA
Sbjct: 270 QL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLA 328
Query: 341 VQHIKGLQNQVENLHKDLEHCTCGCK 366
V +IK LQ Q + L+ + +C C K
Sbjct: 329 VDYIKDLQRQYKILNDNRANCKCMNK 354
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 145/260 (55%), Gaps = 43/260 (16%)
Query: 134 SSLLRQRSSPAGFLSH---FASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ 190
S+L+RQ+SSPA F S+ FA+ T+ RE ++ + G S+G L S S
Sbjct: 163 SNLIRQKSSPAEFFSNENGFATLTL-----REVESFKANGISNGTLNFSSRPSTC----- 212
Query: 191 DSLSQISEESENGIDGVSSGSGRQ-NATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTL 249
L ++ + +ENGI + S + N + ++ F + W+N SA + +T+
Sbjct: 213 --LKRMPQIAENGIQSLESNCDQTINLVNENGSSKFTNEFWDN------SAFNAHKTENE 264
Query: 250 DGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKR 295
D +F+ N LDSQ ++P +S +M +++ L + + SVPCKIRAKR
Sbjct: 265 DEIMFSTTNGLDSQEADFGYQNLGLTHHLSLPSSSTKMTSMEKFLQV-QGSVPCKIRAKR 323
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G ATHPRSIAER RRTRIS ++KKLQ L P DKQTS +DMLDLAV++IK LQ QV+ L
Sbjct: 324 GFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQVQILT 383
Query: 356 KDLEHCTCG------CKPTS 369
+ C C CKP S
Sbjct: 384 DCKDKCKCASHEKKHCKPCS 403
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 141/255 (55%), Gaps = 38/255 (14%)
Query: 136 LLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSR--LKSQLSFTGQDS- 192
L+RQ+SSPAGF S+++ + R+ ++ S+G S L L+F+ + S
Sbjct: 189 LIRQKSSPAGFFSNYSVDNAAL---RDVASFRGCDVSNGQAITSSSGLHGTLNFSSRPSS 245
Query: 193 ----LSQISEESENGIDG--VSSGSGRQ---NATHSYSTASFGMDSWENGTSIVFSAPPS 243
+ QI+E ++ V S + R N T Y SF D W+ FSA
Sbjct: 246 CSTRMPQIAENGNEDVEANCVESRNLRNDNINNTKCY-MPSFTTDFWDGS---AFSA--- 298
Query: 244 KRTKTLDGDI-FNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVP 288
RT + G+I F+ A+D Q ++P +S MAT++ L I + SVP
Sbjct: 299 SRTASNSGEISFSTSKAMDIQDEDFGYQKVGLTHHLSLPGSSSRMATMEKLYQI-QGSVP 357
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
CKIRAKRG ATHPRSIAERERRTRIS ++KKLQDL P DKQTS +DMLDLAV++IK LQ
Sbjct: 358 CKIRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQ 417
Query: 349 NQVENLHKDLEHCTC 363
QV+ L CTC
Sbjct: 418 KQVKILRDTRAKCTC 432
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 138/252 (54%), Gaps = 24/252 (9%)
Query: 130 RAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVS--RLKSQLSF 187
++ S+ LRQ S PAG S+ S G+ + GNY+ + G L +S R+K+ +SF
Sbjct: 130 KSFDSNSLRQSSFPAGHFSNNISFQNGYDAMKGVGNYSGVNGNDGELSLSMNRMKNHISF 189
Query: 188 TGQDS---LSQISEESENGIDGVS---SGSGRQ---NATHSYSTASFGMDSWENGTSIVF 238
+ L +S S+ G +G+ GRQ N Y F SW
Sbjct: 190 SSISPSSSLGMLSPTSKMGTEGIRVTRPEDGRQGSCNGDARYYGPGFPYASWNEP----- 244
Query: 239 SAPPSKRT-------KTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKI 291
S P +R+ + +G+ N + L ++P+TS EM +DNLL DSVPCKI
Sbjct: 245 SHPKRQRSSNDELLFDSQNGEPGNQVQRLSHHLSLPRTSSEMFAMDNLLQF-SDSVPCKI 303
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRG ATHPRSIAER RRTRIS +++KLQ+LVP MDKQTS ++MLDLA+ +IK LQ Q
Sbjct: 304 RAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQF 363
Query: 352 ENLHKDLEHCTC 363
+ L C C
Sbjct: 364 KTLSDKRAKCKC 375
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 146/260 (56%), Gaps = 39/260 (15%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSR--LKSQLSFTGQD 191
S+L RQ+SSPA F F+ E + RE G++ + S+G + S L S +F+ +
Sbjct: 196 SNLFRQKSSPAAF---FSIEN-DLAALREVGSFKADDVSNGLVTASTGGLHSSHTFSSRP 251
Query: 192 S--LSQISEESENGIDGVSSGSGR------QNATHSYSTASFGMDSWENGTSIVFSAPPS 243
S L ++ + +ENG + + + N + SF + WE S F+AP
Sbjct: 252 SSCLKRLPQIAENGNESLEENCDQSRNLVNDNGSSKCYIPSFTNELWE---SSAFNAP-- 306
Query: 244 KRTKTLDGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVPC 289
+T+ D +F+ N L+SQ ++P +S +M++++ L I + SVPC
Sbjct: 307 -KTENEDEIMFSTSNILESQEADFSFQNLGLTHHLSLPSSSTKMSSIEKFLQI-QGSVPC 364
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
KIRAKRG ATHPRSIAER RRTRIS ++KKLQDL P +KQTS +DMLDLAV++IK LQ
Sbjct: 365 KIRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQ 424
Query: 350 QVENLHKDLEHCTCGCKPTS 369
+V K L C CK TS
Sbjct: 425 KV----KILSDCKAKCKCTS 440
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 139/286 (48%), Gaps = 57/286 (19%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGF---------LSHFA-----------SETV 155
GL + G+N T+ S+LLRQ SSPAG L HF +
Sbjct: 112 GLDQFLGINN-HHTKPVESNLLRQSSSPAGMFTNLSDQNELKHFGLNKSNKCLLYTYKFA 170
Query: 156 GFSVTRETGNYNSQGRS---SGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSG 212
G+ R NY S S GL S + LSQI E +
Sbjct: 171 GYGSMRNLMNYEEDEESPSNSNGLRRHCSLSSRPPSSLGMLSQIPEIA------------ 218
Query: 213 RQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIF---------NCLNALDSQ 263
+F W + +S + + KR DG +F N + L
Sbjct: 219 --------PETNFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHH 270
Query: 264 FTMPQ---TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKL 320
++P+ T+ +M +VD L + +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KL
Sbjct: 271 LSLPKSSSTASDMVSVDKYLQL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKL 329
Query: 321 QDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
Q+LVPNMDKQT+ SDMLDLAV +IK LQ Q + L+ + +C C K
Sbjct: 330 QELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNK 375
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Query: 260 LDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKK 319
L QF++P+TS EMA ++ L +D+VPCKIRAKRGCATHPRSIAER RRTRIS +++K
Sbjct: 39 LAHQFSLPKTSSEMAAIEKFLQF-QDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRK 97
Query: 320 LQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
LQ+LVPNMDKQT+ +DMLDLAV +IK LQ QV+ L+ +CTC K
Sbjct: 98 LQELVPNMDKQTNTADMLDLAVDYIKDLQKQVKGLNDSRANCTCSAK 144
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 140/261 (53%), Gaps = 37/261 (14%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDS- 192
S LLRQ SSPA FL+H + G+ G G G RLK QLSF+
Sbjct: 145 SLLLRQSSSPADFLNHLNMDN-GYGNMLRAGMSGGGGGFRNG-EAPRLKGQLSFSSSRQG 202
Query: 193 --LSQISE---------------ESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGT- 234
+SQISE + E G +G G + +S G W++ +
Sbjct: 203 SMMSQISEMVGEELGGGGGNSSADDEAGSNGGYGIPGPGGYPMGGAASSAG---WDDPSP 259
Query: 235 -------SIVFSAPPS--KRTKTLDGDIFNCLNALDSQFTMP---QTSLEMATVDNLLNI 282
S+ S P + KR + G+ + + Q ++P +TS EMA ++ L
Sbjct: 260 SPLLSVDSLQSSGPAAAAKRRRDSPGNNGASVPPIKHQLSLPPSGKTSPEMAAIEKFLQF 319
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
+D+VPCKIRAKRGCATHPRSIAER RRT+IS +++KLQ+LVPNM+KQT+ SDMLDLAV
Sbjct: 320 -QDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVD 378
Query: 343 HIKGLQNQVENLHKDLEHCTC 363
+IK LQ QV+ ++ CTC
Sbjct: 379 YIKELQMQVKVMNDGRASCTC 399
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 138/254 (54%), Gaps = 28/254 (11%)
Query: 131 AASSSLLRQRSSPAGFLSHFASET-VGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTG 189
AA +SLLRQ SSPAGFL+H + G ++ R G RLK QLSF+
Sbjct: 144 AAGNSLLRQSSSPAGFLNHLTMDNGYGRNMLRAGMGGGGGGGDP------RLKGQLSFSS 197
Query: 190 QDS--LSQISE---ESENGIDGVSSGSGRQNATHSYSTASFGM-----DSWEN----GTS 235
+ +SQISE E E G S N + G +WE TS
Sbjct: 198 RQGSVMSQISEMGSEDEELAGGGGSPEAGSNGGGAARGGYGGGYAMGSSAWEEPSPPATS 257
Query: 236 IV-FSAPPSKRTK-----TLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPC 289
++ S+ PSKR + L + ++ S EMA ++ L +D+VPC
Sbjct: 258 LLPDSSLPSKRPRDDLPRQLSLPAASKSSSKPPSSASAAASPEMAAIEKFLQF-QDAVPC 316
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
KIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNM+KQT+ +DMLDLAV +IK LQ
Sbjct: 317 KIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQK 376
Query: 350 QVENLHKDLEHCTC 363
QV+ L+ CTC
Sbjct: 377 QVKVLNDSRSSCTC 390
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 141/263 (53%), Gaps = 52/263 (19%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSG-------GLG--------- 177
S+L RQ+SSPAGF F+ E + RE G++ S+G GL
Sbjct: 190 SNLFRQKSSPAGF---FSIEN-DLAALREVGSFKDNDVSNGQATASTSGLHSSLTFSSRS 245
Query: 178 ---VSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWENGT 234
+ ++ Q++ G +SL + ++S N ++ N + SF + WE
Sbjct: 246 SSCLKQMPPQIAENGNESLEENYDQSRNLVND--------NGSSKCYIPSFTNEFWE--- 294
Query: 235 SIVFSAPPSKRTKTLDGDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLL 280
S F+AP +T+ D +F+ N L+SQ ++P +S +M++++ L
Sbjct: 295 SSAFNAP---KTENEDEIMFSTSNGLESQETDFSYQNHGLTHHLSLPSSSTKMSSIEMFL 351
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
I + SVP KIRAKRG ATHPRSIAERERRTRIS ++KKLQDL P +K TS +DMLDLA
Sbjct: 352 QI-QGSVPYKIRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLA 410
Query: 341 VQHIKGLQNQVENLHKDLEHCTC 363
V+HIK LQ QV+ L C C
Sbjct: 411 VEHIKDLQQQVQILSDRKAKCKC 433
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 122/210 (58%), Gaps = 24/210 (11%)
Query: 175 GLGVSRLKSQLSFTGQDS--LSQISEESENGIDGVSSGSGRQNATHSYSTAS----FGMD 228
G+ +RLK QLSF + +SQISE +DG G G A S ++ + G+
Sbjct: 26 GVSDARLKGQLSFPSRQGSVMSQISEVGSEELDG--GGGGSPEAAGSNASGAPRGYVGIP 83
Query: 229 SWE--NGTSIVFSAPPS-------KRTKTLDGDIFNCLN--ALDSQFTMPQ----TSLEM 273
+ GTS +S PS KR G + L Q ++P S EM
Sbjct: 84 GYPMGGGTSGAWSDEPSPSPTSGAKRRPRDSGPAPQNVQQQPLAPQLSLPSGGKPASAEM 143
Query: 274 ATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
A ++ L +D+VPCKIRAKRGCATHPRSIAER RRT+IS +++KLQ+LVPNM+KQT+
Sbjct: 144 AAIEKFLQF-QDAVPCKIRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNT 202
Query: 334 SDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
+DMLDLAV +IK LQ QV+ L+ +CTC
Sbjct: 203 ADMLDLAVDYIKDLQKQVKVLNDGRANCTC 232
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 139/263 (52%), Gaps = 47/263 (17%)
Query: 131 AASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ 190
AA +SLLRQ SSPAGFL+H + ++ R G RLK QLSF+ +
Sbjct: 146 AAGNSLLRQSSSPAGFLNHLTMDNGYGNMLRAGMGGGGGGGDP------RLKGQLSFSSR 199
Query: 191 DS--LSQISE---ESENGIDGVSSGSGRQNATHSYSTASFGM-----DSWEN----GTSI 236
+SQISE E E G S N + G +WE TS+
Sbjct: 200 QGSVMSQISEMGSEDEELAGGGGSPEAGSNGGGAARGGYGGGYAMGSSAWEEPSPPATSL 259
Query: 237 V-FSAPPSKRTKTLDGDIFNCLNALDSQFTMP---------------QTSLEMATVDNLL 280
+ S+ PSKR + + L Q ++P S EMA ++ L
Sbjct: 260 LPDSSLPSKRPR----------DDLPRQLSLPAASKNSSKPPSSASAAASPEMAAIEKFL 309
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+D+VPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNM+KQT+ +DMLDLA
Sbjct: 310 QF-QDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLA 368
Query: 341 VQHIKGLQNQVENLHKDLEHCTC 363
V +IK LQ QV+ L+ CTC
Sbjct: 369 VDYIKELQKQVKVLNDSRSSCTC 391
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 173/376 (46%), Gaps = 65/376 (17%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVS----------SSHSHQHHHYFAG 78
GL RY SAP S + +SI SP I+S + S HH + +
Sbjct: 24 GLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSNNVDSFLHHTFNSD 83
Query: 79 GS------TTTAGGDSSPVSSFTTTEST---CKVNSSNAPGNNTKSGLQRSYGLNEIPQT 129
G+ T ++ + TT E VN + G + + RS G N+ P+
Sbjct: 84 GTEKKPPEVKTEEDETEIPVTVTTMEVVSGEISVNPEESIG--YVASVSRSLGQNKRPRE 141
Query: 130 ---RAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNY---NSQGRSSGGLGVSRLKS 183
R ++L R SSPAG S ET +V + G + N S+ +S
Sbjct: 142 KDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMNTSTTEASSLTPRS 201
Query: 184 QLSFTGQDSLSQISE-ESENGIDGV---------------SSGSGRQNATHSYSTASFGM 227
+L ++S ISE + + G + GS T T S G+
Sbjct: 202 KLLPPTSRAMSPISEVDVKPGFSARLPPRTLSGGFNRSFGNEGSASSKLTAIARTQSGGL 261
Query: 228 DSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSV 287
D + KT D D + L ++P++ ++ ++ LL+ DS+
Sbjct: 262 DQY----------------KTKDEDSASRRPPLAHHMSLPKS---LSDIEQLLS---DSI 299
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
PCKIRAKRGCATHPRSIAER RRT+IS +++KLQDLVPNMD QT+ +DMLDLAVQ+IK L
Sbjct: 300 PCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDL 359
Query: 348 QNQVENLHKDLEHCTC 363
Q QV+ L + C C
Sbjct: 360 QEQVKTLEETRARCRC 375
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 139 bits (351), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/99 (68%), Positives = 82/99 (82%)
Query: 269 TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMD 328
++LEMA +D L + D VP K+RAKRGCATHPRSIAERERRTRIS KL+KLQ+LVPNMD
Sbjct: 5 SALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMD 64
Query: 329 KQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKP 367
KQTS +DMLDLAV+HIKGLQ+Q++ L + E CTC +P
Sbjct: 65 KQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTCCSRP 103
>gi|356572064|ref|XP_003554190.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 383
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 144/247 (58%), Gaps = 14/247 (5%)
Query: 130 RAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVS--RLKSQLSF 187
++ S+LLRQ S PAG S+ S G+ + GNY+ + G L +S R+K+Q+SF
Sbjct: 126 KSFDSNLLRQSSFPAGHFSNNISFQNGYDTMKGVGNYSGVNGNDGELSLSMNRMKNQISF 185
Query: 188 TGQDS---LSQISEESENGIDGV---SSGSGRQ---NATHSYSTASFGMDSWENGT--SI 236
+ L +S S+ G +G+ S+ GRQ N Y F SW +
Sbjct: 186 SSISPSSSLGVLSPTSKIGTEGIRVTSTEDGRQGGSNGDARYFGPGFSYASWNEPSHHKR 245
Query: 237 VFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRG 296
S+ + + DG++ N + L ++P+TS +M +D+LL DSVPCKIRAKRG
Sbjct: 246 QRSSNDELLSDSQDGELGNQVQTLSHHLSLPRTSSDMFAMDSLLQF-SDSVPCKIRAKRG 304
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
ATHPRSIAER RR+RIS +++KLQ+LVPNMDKQTS ++MLDLAV +IK LQ + + L+
Sbjct: 305 FATHPRSIAERVRRSRISERIRKLQELVPNMDKQTSTAEMLDLAVDYIKDLQKEFKTLND 364
Query: 357 DLEHCTC 363
C C
Sbjct: 365 KRAKCKC 371
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 89/122 (72%), Gaps = 6/122 (4%)
Query: 252 DIFNCLN--ALDSQFT--MPQTSLEMATVDNLLNIPEDS--VPCKIRAKRGCATHPRSIA 305
DI L+ +SQF+ +SLE+A +D + + V K+RAKRGCATHPRSIA
Sbjct: 196 DIIGTLDIGGYESQFSGMASPSSLELAGMDKYMQAQQQQDQVAFKVRAKRGCATHPRSIA 255
Query: 306 ERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGC 365
ERERRTRIS KL+KLQDLVPNMDKQTS SDMLDLAV+HIKGLQ+Q++ + + + CTC
Sbjct: 256 ERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQLQAMKHEQDKCTCCS 315
Query: 366 KP 367
KP
Sbjct: 316 KP 317
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 153/297 (51%), Gaps = 75/297 (25%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVS--------RLKSQL 185
++L+R SSPAG LS +E G T E+G R+S G+G S R++ Q+
Sbjct: 261 NTLIRHSSSPAGLLSELVAEGRG---TFESGFMEGTVRNSIGVGNSCGDIIIPNRVQRQM 317
Query: 186 SFTGQDS----LSQIS-----EESENGIDGVSSGSGRQN---------------ATHSYS 221
+ Q+S LSQ+S E + ++ GS +N A Y
Sbjct: 318 NRLQQNSSPGLLSQLSVDMSVPEMVDRLNMAMVGSSAENQAGSSSDDSSLGSGNAGQGY- 376
Query: 222 TASFGMDSW-------------ENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQ----- 263
++F + SW +NG + F+A KR K LD + LN D Q
Sbjct: 377 ISNFSVKSWDDEAMTPGNFAGMQNGAN--FTA--RKRAKELDMKLMQGLNNSDHQKVEGG 432
Query: 264 -----------FTMPQ-TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRT 311
+ +P+ TS E+A + L +D+VPCK+RAKRGCATHPRSIAER RRT
Sbjct: 433 IRGASALTNHPYNLPRSTSSELAMEEFL----QDAVPCKVRAKRGCATHPRSIAERVRRT 488
Query: 312 RISRKLKKLQDLVPNMDKQT-SYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKP 367
RIS +++KLQ+LVPN DKQT + +DMLD AV+++K LQ QV+ L ++ CTC P
Sbjct: 489 RISERMRKLQELVPNSDKQTVNIADMLDEAVEYVKSLQKQVQELAENRAKCTCTHNP 545
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 133/247 (53%), Gaps = 41/247 (16%)
Query: 134 SSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQDSL 193
S+L+RQ+SSPAGF S+ GF+ T SG G S+L + +
Sbjct: 17 SNLIRQKSSPAGFFSN----ANGFAAT------------SGLNGTENFSSRLPSSCLTRM 60
Query: 194 SQISEESENGIDGVSSGSGRQN---ATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLD 250
QI+E ++ S +N ++ SY SF + W+N SA S++T+ D
Sbjct: 61 PQIAENRNESLEINCDQSNLENYNSSSKSY-MPSFTSEIWDN------SAFHSQKTECED 113
Query: 251 GDIFNCLNALDSQ--------------FTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRG 296
+F+ N L+SQ ++ S ++A++ L I + SVPCKIRAKRG
Sbjct: 114 EIVFSTSNGLESQEEDFCYQNLGLTHHLSVLSPSAKIASIKKFLQI-QGSVPCKIRAKRG 172
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
ATHPRS+AER RRTRIS K+KKL+ L P DKQTS +DMLD AV++IK LQ QV+ L
Sbjct: 173 FATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQVKTLTD 232
Query: 357 DLEHCTC 363
E C C
Sbjct: 233 CREKCKC 239
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 45/251 (17%)
Query: 131 AASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ 190
AA +SLLRQ SSPAGFL+H + ++ R G RLK QLSF+ +
Sbjct: 146 AAGNSLLRQSSSPAGFLNHLTMDNGYGNMLRAGMGGGGGGGDP------RLKGQLSFSSR 199
Query: 191 DS--LSQISEE-SENGIDGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTK 247
+SQISE SE+ + ++ G G S + + PSKR +
Sbjct: 200 QGSVMSQISEMGSED--EELAGGGG--------SPEAGSNGGGAARGGYGGGSLPSKRPR 249
Query: 248 TLDGDIFNCLNALDSQFTMP---------------QTSLEMATVDNLLNIPEDSVPCKIR 292
+ L Q ++P S EMA ++ L +D+VPCKIR
Sbjct: 250 ----------DDLPRQLSLPAASKNSSKPPSSASAAASPEMAAIEKFLQF-QDAVPCKIR 298
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKRGCATHPRSIAER RRTRIS +++KLQ+LVPNM+KQT+ +DMLDLAV +IK LQ QV+
Sbjct: 299 AKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQVK 358
Query: 353 NLHKDLEHCTC 363
L+ CTC
Sbjct: 359 VLNDSRSSCTC 369
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 33/303 (10%)
Query: 79 GSTTTAGGDSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNE---IPQTRAASSS 135
G + TA +S SS T E S++ NN S QR + + Q + ++
Sbjct: 34 GGSATAATNSGETSSSTFREFMDHNPSNHKVDNNESSLSQRHMNSQQGYRMDQHKGFYTN 93
Query: 136 LLRQRSSPAGFLSHFASETV-----GFSVTRETGNYNSQGRSSGGLGVSR--LKSQLSFT 188
LLRQ SS G HF++ + G+ + NY+ S G L +S L +Q+ F+
Sbjct: 94 LLRQSSSHDG---HFSNNNIISFGNGYEPMKGVENYDGVKDSDGELTLSMNILNNQIGFS 150
Query: 189 GQ--DSLSQISEESENGIDGV---SSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPS 243
+ S +S+ + G DG+ S RQ ++ D+ G +V+ +
Sbjct: 151 PRTPSSFRMLSQNPKTGSDGIGTTSHDDRRQVGSND--------DAQYYGHKLVYDSNDQ 202
Query: 244 KRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRS 303
+ + N ++ L ++P+ S EM V+ LL P DSVP IRAKRG ATHPRS
Sbjct: 203 ------NVGVRNQVDTLSHHLSLPRKSSEMFVVEKLLQFP-DSVPSSIRAKRGFATHPRS 255
Query: 304 IAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
+AER RRTRIS +++KLQ++VPN+DKQT S+MLDLAV++IK LQ Q++ + C C
Sbjct: 256 LAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQLKTMSAKRAKCRC 315
Query: 364 GCK 366
K
Sbjct: 316 RNK 318
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 260 LDSQFTMPQTSL-EMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLK 318
L QF++P+TS E+A ++ L +D+VPCK+RAKRGCATHPRSIAER RRT+IS +++
Sbjct: 163 LAHQFSLPKTSSSEVAAIEKFLQF-QDAVPCKVRAKRGCATHPRSIAERVRRTKISERIR 221
Query: 319 KLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
KLQ+LVP+MDKQT+ SDMLDLAV +IK LQ QV+ L++ CTC
Sbjct: 222 KLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQVKALNESRASCTC 266
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 172/380 (45%), Gaps = 72/380 (18%)
Query: 29 GLTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVS----------SSHSHQHHHYFAG 78
GL RY SAP S + +SI SP I+S + S HH + +
Sbjct: 24 GLIRYQSAPSSYFSSFGESIEEFLDRPTSPETERILSGFLQTTDTSDNVDSFLHHTFNSD 83
Query: 79 GS------TTTAGGDSS-PVSSFTTTESTCKVNSSNAPGNNTKS-GLQRSYGLNEIPQT- 129
G+ T D+ PV++ T N S G S N+ P+
Sbjct: 84 GTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDGEISVNPEVSIGYVASVSRNKRPREK 143
Query: 130 --RAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYN-SQGRSSGGLGVSRL--KSQ 184
R ++L R SSPAG S ET +V + G + S S+ S L +S+
Sbjct: 144 DDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGGFGGSNVMSTSNTEASSLTPRSK 203
Query: 185 LSFTGQDSLSQISEESENGID---GVSS------------------GSGRQNATHSYSTA 223
L ++S ISE +D G SS GS T T
Sbjct: 204 LLPPTSRAMSPISE-----VDVKPGFSSRLPPRTLSGGFNRSFGNEGSASSKLTALARTQ 258
Query: 224 SFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIP 283
S G+D + KT D D + L ++P++ ++ ++ LL+
Sbjct: 259 SGGLDQY----------------KTKDEDSASRRPPLAHHMSLPKS---LSDIEQLLS-- 297
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
DS+PCKIRAKRGCATHPRSIAER RRT+IS +++KLQDLVPNMD QT+ +DMLDLAVQ+
Sbjct: 298 -DSIPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQY 356
Query: 344 IKGLQNQVENLHKDLEHCTC 363
IK LQ QV+ L + C C
Sbjct: 357 IKDLQEQVKALEESRARCRC 376
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 132 bits (332), Expect = 3e-28, Method: Composition-based stats.
Identities = 63/104 (60%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
Query: 263 QFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
++P+TS+EM ++ L++ +DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+
Sbjct: 3 HLSLPKTSVEMVAMEKFLHL-QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQE 61
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
LVPNMDKQT+ +DMLDLAV +IK LQ Q + L + +C C K
Sbjct: 62 LVPNMDKQTNTADMLDLAVDYIKDLQKQYKTLSDNRANCKCLSK 105
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 128 bits (322), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/101 (60%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Query: 263 QFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
++P+T+ E++ ++ L +DSVPC+ RAKRGCATHPRSIAER RRTRIS +++KLQD
Sbjct: 5 HMSLPKTAAEISAIEKFLQF-QDSVPCRTRAKRGCATHPRSIAERVRRTRISERMRKLQD 63
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ SDMLDLAV +IK LQ QV+ L + C C
Sbjct: 64 LVPNMDKQTNTSDMLDLAVDYIKDLQRQVQTLSEIRARCAC 104
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/86 (65%), Positives = 72/86 (83%)
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
+L + EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DML
Sbjct: 71 DLERMLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADML 130
Query: 338 DLAVQHIKGLQNQVENLHKDLEHCTC 363
+ AV+++KGLQ Q+E L + CTC
Sbjct: 131 EEAVEYVKGLQKQIEELMEHQRKCTC 156
>gi|359478406|ref|XP_002282999.2| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 411
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 137/255 (53%), Gaps = 34/255 (13%)
Query: 106 SNAPG--NNTKSGLQRSYGLNEIPQTRAA---SSSLLRQRSSPAGFLSHFASETVGFSVT 160
S APG N+ S + S G+++ Q + +S+L+R SSPAG SH E G+++
Sbjct: 147 SAAPGTVENSYSAVS-SMGMDQSQQIKIGGGNNSNLIRHSSSPAGLFSHLNVEN-GYAIM 204
Query: 161 RETGNYNSQGRSSGGLGVS---RLKSQLSFTGQDS-----LSQISEESENGIDGVSSGSG 212
R GN+ S ++G S RLK Q++F+ ++ ISE + S +G
Sbjct: 205 RGMGNFGSGSGTNGEPSFSSASRLKGQINFSSGPPSSSGLVTPISEMGNKSMGTGSPDNG 264
Query: 213 RQNATHSYS---TASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQ------ 263
HS S F + SW++ + S K + + F+ LNA ++Q
Sbjct: 265 SFGEGHSNSGGFITGFPIGSWDDSAIMSESFSSLKSVRDDEAKTFSGLNASEAQKGEPAN 324
Query: 264 --------FTMP-QTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRIS 314
++P +TS ++ T++ L +DSVPCKIRAKRGCATHPRSIAER RRTRIS
Sbjct: 325 RPPVLAHHLSLPTKTSADLTTIEKYLQF-QDSVPCKIRAKRGCATHPRSIAERVRRTRIS 383
Query: 315 RKLKKLQDLVPNMDK 329
+++KLQ+LVPNMDK
Sbjct: 384 ERMRKLQELVPNMDK 398
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 82/126 (65%), Gaps = 12/126 (9%)
Query: 241 PPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATH 300
PP++ L G L A +SL +D LL E+SVPCKIRAKRGCATH
Sbjct: 150 PPARYPPPLKGAQTGSLRA---------SSLIEMEMDKLL---EESVPCKIRAKRGCATH 197
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEH 360
PRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DML+ AV ++K LQ Q++ L +
Sbjct: 198 PRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQIQELTEQQRK 257
Query: 361 CTCGCK 366
C C K
Sbjct: 258 CKCMAK 263
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 102/161 (63%), Gaps = 20/161 (12%)
Query: 209 SGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQ 268
SGSG + T Y ++FG+ + + S P+KR++ ++ SQ Q
Sbjct: 107 SGSG--SGTDGY-FSNFGIPANYDYLSTNVDISPTKRSRDME-------TQFSSQLKEEQ 156
Query: 269 TS------LEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
S ++M N+ I EDSVPC++RAKRGCATHPRSIAER RRTRIS ++++LQ+
Sbjct: 157 MSGGISGMMDM----NMDKIFEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQE 212
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ +DML+ AV+++K LQ+Q++ L + + C C
Sbjct: 213 LVPNMDKQTNTADMLEEAVEYVKALQSQIQELTEQQKRCKC 253
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 74/98 (75%), Gaps = 3/98 (3%)
Query: 269 TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMD 328
+SL +D LL EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMD
Sbjct: 151 SSLIEMEMDKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMD 207
Query: 329 KQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
KQT+ +DMLD A+ ++K LQ Q++ L + C C K
Sbjct: 208 KQTNTADMLDEALAYVKFLQRQIQELTEQQRKCKCIAK 245
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 79/101 (78%), Gaps = 5/101 (4%)
Query: 268 QTSLEMATVDNLLNIP-----EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
Q+S +V +LL++ EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+
Sbjct: 147 QSSRLTGSVASLLDVDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE 206
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ +DML+ AV+++K LQ +++ L + + CTC
Sbjct: 207 LVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKKCTC 247
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 79/101 (78%), Gaps = 5/101 (4%)
Query: 268 QTSLEMATVDNLLNIP-----EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
Q+S +V +LL++ EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+
Sbjct: 77 QSSRLTGSVASLLDVDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE 136
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
LVPNMDKQT+ +DML+ AV+++K LQ +++ L + + CTC
Sbjct: 137 LVPNMDKQTNTADMLEEAVEYVKFLQQKIQELSEHQKKCTC 177
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 72/86 (83%)
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
N+ N+ EDSV ++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DML
Sbjct: 173 NMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADML 232
Query: 338 DLAVQHIKGLQNQVENLHKDLEHCTC 363
+ AV+++K LQ Q++ L ++ + CTC
Sbjct: 233 EEAVEYVKVLQRQIQELTEEQKRCTC 258
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 72/86 (83%)
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
N+ N+ EDSV ++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DML
Sbjct: 171 NMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADML 230
Query: 338 DLAVQHIKGLQNQVENLHKDLEHCTC 363
+ AV+++K LQ Q++ L ++ + CTC
Sbjct: 231 EEAVEYVKVLQRQIQELTEEQKRCTC 256
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 67/82 (81%)
Query: 282 IPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
I EDSVPCKIRAKRG ATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ ++MLD AV
Sbjct: 109 ILEDSVPCKIRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAV 168
Query: 342 QHIKGLQNQVENLHKDLEHCTC 363
++K LQNQ+E L + C C
Sbjct: 169 AYVKFLQNQIEELSEQQRRCKC 190
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 94/141 (66%), Gaps = 5/141 (3%)
Query: 223 ASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNI 282
+SFG+ + + S P+KR++ ++ + L + Q + + + +D L+
Sbjct: 115 SSFGIPANYDYLSTNVDISPTKRSRDMETQFSSQLK--EEQMSGGVSGMMDMNMDKLI-- 170
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
E SVPC++RAKRGCATHPRSIAER RRTRIS ++++LQ+LVPNMDKQT+ +DML+ AV+
Sbjct: 171 -EGSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVE 229
Query: 343 HIKGLQNQVENLHKDLEHCTC 363
++K LQ Q++ L + + C C
Sbjct: 230 YVKALQGQIQELTEQQKRCKC 250
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 66/80 (82%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DMLD AV +
Sbjct: 74 EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAY 133
Query: 344 IKGLQNQVENLHKDLEHCTC 363
+K LQ Q+E L + C C
Sbjct: 134 VKFLQKQIEELSEHQRRCKC 153
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 78/105 (74%), Gaps = 5/105 (4%)
Query: 267 PQTSLEMATVDNLLNIP-----EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQ 321
PQ E + V +L+++ EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ
Sbjct: 139 PQLKREGSGVSSLIDMEMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQ 198
Query: 322 DLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
++VPNMDKQT+ +DML+ AV+++K LQ Q++ L + C C K
Sbjct: 199 EVVPNMDKQTNTADMLEEAVEYVKFLQKQIQELTEHQRRCKCMVK 243
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 69/86 (80%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ EDSV C++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDKQT+ +DML+ A
Sbjct: 173 KLAEDSVLCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEA 232
Query: 341 VQHIKGLQNQVENLHKDLEHCTCGCK 366
V+++K LQ Q++ L + + C C K
Sbjct: 233 VEYVKFLQKQIQELTEQQKKCKCSAK 258
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 6/92 (6%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK------QTSYS 334
N+ +DSVPC++RAKRGCATHPRSIAER RRTRIS ++++LQ+LVPNMDK QT+ S
Sbjct: 406 NLLQDSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTS 465
Query: 335 DMLDLAVQHIKGLQNQVENLHKDLEHCTCGCK 366
DMLD AV+++K LQ QV++L + E C CK
Sbjct: 466 DMLDEAVEYMKFLQKQVDDLQECREKCQGLCK 497
>gi|357454361|ref|XP_003597461.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486509|gb|AES67712.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 411
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 123/247 (49%), Gaps = 34/247 (13%)
Query: 109 PGNNTKSGLQRSY--GLNEIPQTR---AASSSLLRQRSSPAGFLSHFASETVGFSVTRET 163
P N SGL S+ G+N + Q + +S+L+R SSPAG S E G+ R
Sbjct: 132 PNQNVSSGLDGSFSMGVNRLQQVKNHGGNNSNLIRHSSSPAGLFSQINIEN-GYVSMRGM 190
Query: 164 GNYNSQGRSSGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQN-------- 215
G + G + + ++ + S Q S S + ID V R+N
Sbjct: 191 G---TLGAVNNSMKEAKFSTARSLKNQ---SNYSSGLMSTIDEVGDKDNRENNLENEAFG 244
Query: 216 ATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDG-DIFNCLNA------------LDS 262
+H + +D+W++ + + KR + D F+ LN L
Sbjct: 245 ESHGNEYMDYPVDTWDDSEMMSENVGGLKRFRDNDSKQQFSGLNVQNETGGGHSNSPLAH 304
Query: 263 QFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
Q +MP TS EMA ++ L+ DSVP KIRAKRGCATHPRSIAER RRT+IS +++KLQD
Sbjct: 305 QLSMPNTSSEMAAMEKFLHFS-DSVPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQD 363
Query: 323 LVPNMDK 329
LVPNMDK
Sbjct: 364 LVPNMDK 370
>gi|223950383|gb|ACN29275.1| unknown [Zea mays]
gi|414869404|tpg|DAA47961.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414869405|tpg|DAA47962.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 347
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 125/225 (55%), Gaps = 39/225 (17%)
Query: 132 ASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV------------- 178
A+SSL+RQ SSPAGFL HF + Y + R+S G+G
Sbjct: 129 AASSLIRQSSSPAGFLDHFGMDN----------GYGAMLRASMGMGFQDGGASDSLAGGG 178
Query: 179 ---SRLKSQLSFTGQDS--LSQISE-ESENGIDGVSS--GSGRQNATHSYSTASFGMDSW 230
RL QLSF+ + +SQISE +S+ + G SS G +A +
Sbjct: 179 GGSGRLGGQLSFSSRQGSLMSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWD 238
Query: 231 ENGTSIVFSAPPS--KRTKTLDGDIFNCLNALDSQFTMPQTSL-EMATVDNLLNIPEDSV 287
++ ++++ + P+ KR + D L QF++P+TS E+A ++ L +D+V
Sbjct: 239 DSSSALLPDSLPATNKRPR----DSLEHGGGLAHQFSLPKTSSSEVAAIEKFLQF-QDAV 293
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTS 332
PCK+RAKRGCATHPRSIAER RRT+IS +++KLQ+LVP+MDK T+
Sbjct: 294 PCKVRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKVTA 338
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 64/71 (90%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N+ +DSVPC++RAKRGCATHPRSIAER RRTRIS ++++LQ+LVPNMDKQT+ SDMLD A
Sbjct: 15 NLLQDSVPCRLRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEA 74
Query: 341 VQHIKGLQNQV 351
V+++K LQ QV
Sbjct: 75 VEYMKFLQKQV 85
>gi|413937661|gb|AFW72212.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 252 DIFNCLNALDSQFT--MPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERER 309
DI L A D QF+ M T+LEMA +D + + +D VP K+RAKRGCATHPRSIAERER
Sbjct: 208 DIITTLGAYDPQFSGAMAGTALEMAGMDRYVQLQQDQVPFKVRAKRGCATHPRSIAERER 267
Query: 310 RTRISRKLKKLQDLVPNMDK 329
RTRIS KL+KLQDLVPNMDK
Sbjct: 268 RTRISEKLRKLQDLVPNMDK 287
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 68/83 (81%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
+DSVPCK+RA+RGCATHPRS+AER RRT+IS +K+L DLVPNMDKQT+ +DML+ A+++
Sbjct: 550 QDSVPCKLRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEY 609
Query: 344 IKGLQNQVENLHKDLEHCTCGCK 366
+K L+ ++E + ++L C C+
Sbjct: 610 MKQLKEKIEQMKEELRRCKEKCQ 632
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 126/242 (52%), Gaps = 43/242 (17%)
Query: 130 RAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTG 189
RAA S+L R+ ++P F + F + + SS GL SQ + +
Sbjct: 231 RAAFSALHREEATPDSFATTFQNS--------KNAVLCQSSLSSAGL------SQPNISM 276
Query: 190 QDSLSQISEESENGIDGVSSGSGRQN--ATHSYSTASFGMDS--WENGTSIVFSAPPSKR 245
QD ++ ENG + SS + N Y+ + + + W++ TS P+KR
Sbjct: 277 QDRMA------ENGSEKNSSRNSDDNNHLISGYAASIYSQEDCHWKSPTS------PAKR 324
Query: 246 TKTLDGDIFNCLNALD-------------SQFTMPQTSLEMATVDNLLNIPEDSVPCKIR 292
+ LDG+ +++ ++P ++ ++ + + +VP + R
Sbjct: 325 QRGLDGESETSSGSVEGSTYRKSQQGGLIRHMSLPHSTNGDSSSPGVEDNTFHTVPMRTR 384
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKRGCATHPRSIAER RRT+IS ++KKLQDLVP+MDKQT+ SDMLD V+++K LQ QV+
Sbjct: 385 AKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQRQVQ 444
Query: 353 NL 354
L
Sbjct: 445 EL 446
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 6/81 (7%)
Query: 269 TSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMD 328
+SL ++ LL EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMD
Sbjct: 173 SSLIEMEMEKLL---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMD 229
Query: 329 KQTSYSDMLDLAV---QHIKG 346
KQT+ +DMLD AV ++IKG
Sbjct: 230 KQTNTADMLDEAVGNSRNIKG 250
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 59/69 (85%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
+VP + RAKRGCATHPRSIAER RRT+IS ++K+LQDLVPNMDKQT+ SDMLD V+++K
Sbjct: 27 AVPMRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVK 86
Query: 346 GLQNQVENL 354
LQ +V+ L
Sbjct: 87 SLQRKVQEL 95
>gi|302767438|ref|XP_002967139.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
gi|300165130|gb|EFJ31738.1| hypothetical protein SELMODRAFT_86848 [Selaginella moellendorffii]
Length = 110
Score = 105 bits (263), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/73 (60%), Positives = 63/73 (86%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
+DSVPCK+RA+RGCATHPRS+AER RRT+IS +K+L DLVPNMDKQT+ +DML+ A+++
Sbjct: 37 QDSVPCKLRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEY 96
Query: 344 IKGLQNQVENLHK 356
+K L+ ++E + +
Sbjct: 97 MKQLKEKIEQMKE 109
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 102 bits (253), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 67/82 (81%), Gaps = 3/82 (3%)
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
D+LL++ PCK RA+RG ATHPRSIAER RR+RIS ++KKLQDLVPNMDKQT+ +DM
Sbjct: 4 DDLLDLYS---PCKTRARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADM 60
Query: 337 LDLAVQHIKGLQNQVENLHKDL 358
LD AV+++K LQ QV++L + +
Sbjct: 61 LDEAVEYVKHLQTQVKDLSETI 82
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Query: 277 DNLLNIPEDSVPCK-IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSD 335
D+L P +VP K IRA RG ATHPRSIAER RR +IS ++KKLQDLVP+MD+QT+ +D
Sbjct: 49 DDLFADPS-AVPLKTIRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTAD 107
Query: 336 MLDLAVQHIKGLQNQVENLHK 356
MLD AV+++K LQ QV+ L K
Sbjct: 108 MLDDAVEYVKQLQQQVQELSK 128
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/72 (62%), Positives = 57/72 (79%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V + RAKRGCATHPRSIAER RRTRIS ++KKLQDLVPNM+K T+ +DMLD V+++K
Sbjct: 1 VQMRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKS 60
Query: 347 LQNQVENLHKDL 358
LQ +V L + +
Sbjct: 61 LQVKVSELQETI 72
>gi|339716190|gb|AEJ88334.1| putative MYC protein [Tamarix hispida]
Length = 269
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 50/59 (84%), Gaps = 6/59 (10%)
Query: 271 LEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK 329
LEM D +L EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+LVPNMDK
Sbjct: 210 LEM---DKML---EDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDK 262
>gi|147795431|emb|CAN77105.1| hypothetical protein VITISV_037095 [Vitis vinifera]
Length = 238
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 5/85 (5%)
Query: 268 QTSLEMATVDNLLNIP-----EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
Q+S +V +LL++ EDSVPC++RAKRGCATHPRSIAER RRTRIS +++KLQ+
Sbjct: 147 QSSRLTGSVASLLDVDMEKLLEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRKLQE 206
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGL 347
LVPNMDK + + +L I+ L
Sbjct: 207 LVPNMDKTPRWLNGFNLYSVAIRIL 231
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 91.3 bits (225), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/65 (69%), Positives = 55/65 (84%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RAKRGCATHPRSIAER RRTRIS ++KKLQDLVPNM+K T+ SDMLD V+++K LQ
Sbjct: 2 RARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQM 61
Query: 350 QVENL 354
+V+ L
Sbjct: 62 KVKEL 66
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 67/101 (66%), Gaps = 3/101 (2%)
Query: 257 LNALDSQFTMPQTSLEMAT---VDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRI 313
L L ++P TS ++ +D+L P +RA RG ATHPRSIAER RR +I
Sbjct: 342 LEGLIRHSSLPATSRPFSSTFELDDLQADPSMVYLKTLRANRGHATHPRSIAERVRRGKI 401
Query: 314 SRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
S ++KKLQ+LVPN D+QT+ +DMLD AV+++K LQ QV+ L
Sbjct: 402 SERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQVQEL 442
>gi|115447169|ref|NP_001047364.1| Os02g0603600 [Oryza sativa Japonica Group]
gi|113536895|dbj|BAF09278.1| Os02g0603600, partial [Oryza sativa Japonica Group]
Length = 60
Score = 88.2 bits (217), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 308 ERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKP 367
ERRTRIS KL+KLQ+LVPNMDKQTS +DMLDLAV+HIKGLQ+Q++ L + E CTC +P
Sbjct: 1 ERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQLQALKHEQEKCTCCSRP 60
>gi|414886018|tpg|DAA62032.1| TPA: putative HLH DNA-binding domain superfamily protein, partial
[Zea mays]
Length = 374
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 97/204 (47%), Gaps = 35/204 (17%)
Query: 131 AASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGVSRLKSQLSFTGQ 190
A ++SL+RQ SSPAGFL+H + G+ G R+ G+ +RLK QLSF+ +
Sbjct: 150 AGNNSLIRQSSSPAGFLNHLNMDN-GYGSMLRVGMGGGGFRN--GVSDARLKGQLSFSSR 206
Query: 191 DS--LSQISEESENGIDGVSSGSGRQNATHS--------------YSTASFGMDSWENGT 234
+SQISE +DG GSG A S Y +W +
Sbjct: 207 QGSVMSQISEVGSEELDG-GGGSGSPEAAGSNASGAARGYSGIPGYPMGGLASGAWPDEA 265
Query: 235 SIVFSAPPSKRTKTLD-GDIFNCLNALDSQFTMP--------QTSLEMATVDNLLNIPED 285
S +P S + D G L Q ++P S EMA ++ L +D
Sbjct: 266 S---PSPTSGAKRPRDSGPALQ--QPLAPQLSLPSGKNKGGRAASAEMAAIEKFLQF-QD 319
Query: 286 SVPCKIRAKRGCATHPRSIAERER 309
+VPCKIRAKRGCATHPRSIAER R
Sbjct: 320 AVPCKIRAKRGCATHPRSIAERVR 343
>gi|42571193|ref|NP_973670.1| transcription factor bHLH130 [Arabidopsis thaliana]
gi|330255006|gb|AEC10100.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 300
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 94/207 (45%), Gaps = 38/207 (18%)
Query: 116 GLQRSYGLNEIPQTRAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRS--- 172
GL + G+N T+ S+LLRQ SSPAG ++ + + G+ R NY S
Sbjct: 112 GLDQFLGINNH-HTKPVESNLLRQSSSPAGMFTNLSDQN-GYGSMRNLMNYEEDEESPSN 169
Query: 173 SGGLGVSRLKSQLSFTGQDSLSQISEESENGIDGVSSGSGRQNATHSYSTASFGMDSWEN 232
S GL S + LSQI E + +F W +
Sbjct: 170 SNGLRRHCSLSSRPPSSLGMLSQIPEIAPE--------------------TNFPYSHWND 209
Query: 233 GTSIVFSAPPSKRTKTLDGDIF---------NCLNALDSQFTMPQ---TSLEMATVDNLL 280
+S + + KR DG +F N + L ++P+ T+ +M +VD L
Sbjct: 210 PSSFIDNLSSLKREAEDDGKLFLGAQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYL 269
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAER 307
+ +DSVPCKIRAKRGCATHPRSIAER
Sbjct: 270 QL-QDSVPCKIRAKRGCATHPRSIAER 295
>gi|357440299|ref|XP_003590427.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355479475|gb|AES60678.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 373
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 253 IFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTR 312
+ N ++ L ++ + S EM V+NLL P DSV IRAKRG A HPRS+A+R RRTR
Sbjct: 156 VRNQVDTLSHHLSLTRKSSEMFVVENLLQFP-DSVTSSIRAKRGFARHPRSLAKRVRRTR 214
Query: 313 ISRKLKKLQDLVPNMDKQTSY 333
I+ +++KLQ++V N+DK + Y
Sbjct: 215 INERMRKLQEVVLNIDKTSFY 235
>gi|357498241|ref|XP_003619409.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355494424|gb|AES75627.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 129
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 253 IFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTR 312
+ N ++ L ++ + S EM V+NLL P DSV IRAKRG A HPRS+A+R RRTR
Sbjct: 17 VRNQVDTLSHHLSLTRKSSEMFVVENLLQFP-DSVTSSIRAKRGFARHPRSLAKRVRRTR 75
Query: 313 ISRKLKKLQDLVPNMDK 329
I+ +++KLQ++V N+DK
Sbjct: 76 INERMRKLQEVVLNIDK 92
>gi|414589821|tpg|DAA40392.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 202
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 78/156 (50%), Gaps = 24/156 (15%)
Query: 175 GLGVSRLKSQLSFTGQDS--LSQISEESENGIDGVSSGSGRQNATHSYSTAS----FGMD 228
G+ +RLK QLSF + +SQISE +DG G G A S ++ + G+
Sbjct: 26 GVSDARLKGQLSFPSRQGSVMSQISEVGSEELDG--GGGGSPEAAGSNASGAPRGYVGIP 83
Query: 229 SWE--NGTSIVFSAPPS-------KRTKTLDGDIFNCLN--ALDSQFTMPQ----TSLEM 273
+ GTS +S PS KR G + L Q ++P S EM
Sbjct: 84 GYPMGGGTSGAWSDEPSPSPTSGAKRRPRDSGPAPQNVQQQPLAPQLSLPSGGKPASAEM 143
Query: 274 ATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERER 309
A ++ L +D+VPCKIRAKRGCATHPRSIAER R
Sbjct: 144 AAIEKFLQF-QDAVPCKIRAKRGCATHPRSIAERVR 178
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG ATHP SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 259 RVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 317
Query: 350 QVENL 354
QV+ L
Sbjct: 318 QVKVL 322
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V ++RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + H+K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDHVKF 374
Query: 347 LQNQVENL 354
LQ QV+ L
Sbjct: 375 LQLQVKVL 382
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
KIRA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 350 QVENL 354
QV+ L
Sbjct: 196 QVKVL 200
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
KIRA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 350 QVENL 354
QV+ L
Sbjct: 196 QVKVL 200
>gi|224069048|ref|XP_002302887.1| predicted protein [Populus trichocarpa]
gi|222844613|gb|EEE82160.1| predicted protein [Populus trichocarpa]
Length = 55
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/48 (60%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Query: 322 DLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCGCKPTS 369
D + N+ +Q+ Y+DMLD AVQHIKGLQN+VE LHK++E+CTCGC+ ++
Sbjct: 8 DFLNNL-QQSCYADMLDFAVQHIKGLQNEVEKLHKEMENCTCGCEKST 54
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 195 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQV 253
Query: 350 QVENL 354
QV+ L
Sbjct: 254 QVKVL 258
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 198 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQV 256
Query: 350 QVENL 354
QV+ L
Sbjct: 257 QVKVL 261
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 137 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 350 QVENL 354
QV+ L
Sbjct: 196 QVKVL 200
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 163 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 220
Query: 343 HIKGLQNQVENLHKDLEHCTCGCKPT 368
+I+ LQ QVE L LE G P
Sbjct: 221 YIQSLQRQVEFLSMKLEVVNSGVNPA 246
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 182 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 240
Query: 350 QVENLHKDLEHCTCGCKP 367
QV+ L G P
Sbjct: 241 QVKVLSMSRLGGAAGMAP 258
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 203 KVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 350 QVENL 354
QV+ L
Sbjct: 262 QVKVL 266
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 441 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 500
Query: 351 VENLHKDL 358
VENL L
Sbjct: 501 VENLSMKL 508
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 350 QVENL 354
QV+ L
Sbjct: 188 QVKVL 192
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 350 QVENL 354
QV+ L
Sbjct: 188 QVKVL 192
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 216 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 274
Query: 350 QVENL 354
QV+ L
Sbjct: 275 QVKVL 279
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 246 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 304
Query: 350 QVENL 354
QV+ L
Sbjct: 305 QVKVL 309
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 252 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 310
Query: 350 QVENL 354
QV+ L
Sbjct: 311 QVKVL 315
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
KIRA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + +++ LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVEFLQL 195
Query: 350 QVENL 354
QV+ L
Sbjct: 196 QVKVL 200
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 224 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 282
Query: 350 QVENL 354
QV+ L
Sbjct: 283 QVKVL 287
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 186 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 244
Query: 350 QVENL 354
QV+ L
Sbjct: 245 QVKVL 249
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQDLVPN +K T + MLD V ++K LQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 350 QVENL 354
QV+ L
Sbjct: 62 QVKVL 66
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 103 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 161
Query: 350 QVENL 354
QV+ L
Sbjct: 162 QVKVL 166
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 36 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 94
Query: 350 QVENL 354
QV+ L
Sbjct: 95 QVKVL 99
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 127 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 185
Query: 350 QVENL 354
QV+ L
Sbjct: 186 QVKVL 190
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 203 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 350 QVENLHKDLEHCTCGCKP 367
QV+ L G P
Sbjct: 262 QVKVLSMSRLGGAAGMAP 279
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 203 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQL 261
Query: 350 QVENLHKDLEHCTCGCKP 367
QV+ L G P
Sbjct: 262 QVKVLSMSRLGGAAGMAP 279
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD +++++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 350 QVENL 354
QV+ L
Sbjct: 157 QVKVL 161
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT P S+AER RR +IS ++K LQ LVP DK T + +LD ++H+ LQNQ
Sbjct: 164 VRARRGEATDPHSLAERVRRKKISVRMKLLQSLVPGCDKLTGKAQILDEIIRHVLSLQNQ 223
Query: 351 VENL 354
VE L
Sbjct: 224 VEFL 227
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V ++RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKF 374
Query: 347 LQNQVENL 354
LQ QV+ L
Sbjct: 375 LQLQVKVL 382
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 173 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 231
Query: 350 QVENL 354
QV+ L
Sbjct: 232 QVKVL 236
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD V ++K LQ
Sbjct: 239 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQL 297
Query: 350 QVENL 354
QV+ L
Sbjct: 298 QVKVL 302
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD V ++K LQ
Sbjct: 238 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDYVKFLQL 296
Query: 350 QVENL 354
QV+ L
Sbjct: 297 QVKVL 301
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V ++RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKF 374
Query: 347 LQNQVENL 354
LQ QV+ L
Sbjct: 375 LQLQVKVL 382
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK--QTSYSDMLDLAVQHIKGL 347
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K QT + MLD + ++K L
Sbjct: 237 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFL 296
Query: 348 QNQVE 352
Q QV+
Sbjct: 297 QLQVK 301
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 350 QVENL 354
QV+ L
Sbjct: 90 QVKVL 94
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD +++++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 350 QVENL 354
QV+ L
Sbjct: 157 QVKVL 161
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V ++RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K
Sbjct: 316 VKPRVRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKADKAS-MLDEIIDYVKF 374
Query: 347 LQNQVENL 354
LQ QV+ L
Sbjct: 375 LQLQVKVL 382
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 196 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 254
Query: 350 QVENL 354
QV+ L
Sbjct: 255 QVKVL 259
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V ++RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K
Sbjct: 313 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKF 371
Query: 347 LQNQVENL 354
LQ QV+ L
Sbjct: 372 LQLQVKVL 379
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 255 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 313
Query: 350 QVENL 354
QV+ L
Sbjct: 314 QVKVL 318
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 350 QVENL 354
QV+ L
Sbjct: 89 QVKVL 93
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
L+ P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + ML
Sbjct: 182 KLVEPPKDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALML 239
Query: 338 DLAVQHIKGLQNQVENLHKDL 358
D + +++ LQ QVE L L
Sbjct: 240 DEIINYVQSLQRQVEFLSMKL 260
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Query: 283 PEDSVPCK-----IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
P +S P K +RA+RG AT SIAER RR +IS ++K LQDLVP +K + +L
Sbjct: 106 PSESEPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVL 165
Query: 338 DLAVQHIKGLQNQVENLHKDLE 359
D + +I+ LQ+QVE L LE
Sbjct: 166 DEIINYIQSLQHQVEFLSMKLE 187
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K LQ
Sbjct: 318 RARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQL 376
Query: 350 QVENL 354
QV+ L
Sbjct: 377 QVKVL 381
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RAKRG AT S+AER RR +I+ +LK LQDLVP K + MLD+ +
Sbjct: 98 PKDVV--HVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 155
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQNQ+E L L
Sbjct: 156 YVRSLQNQIEFLSMKL 171
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 190 VRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 249
Query: 351 VENL 354
VE L
Sbjct: 250 VEFL 253
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +I+ ++K LQ+LVPN +K T + MLD ++++K LQ
Sbjct: 295 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 353
Query: 350 QVENL 354
QV+ L
Sbjct: 354 QVKVL 358
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK--QTSYSDMLDLAVQHIKGL 347
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K QT + MLD + ++K L
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 348 QNQVE 352
Q QV+
Sbjct: 309 QLQVK 313
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 190 VRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 249
Query: 351 VENL 354
VE L
Sbjct: 250 VEFL 253
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K LQ
Sbjct: 319 RARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNK-ADKSSMLDEIIDYVKFLQL 377
Query: 350 QVENL 354
QV+ L
Sbjct: 378 QVKVL 382
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
++P+D +RA+RG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD
Sbjct: 294 DLPKDGY-IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEI 352
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQ QVE L L
Sbjct: 353 INYVQSLQRQVEFLSMKL 370
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RAKRG AT S+AER RR +I+ +LK LQDLVP K + MLD+ +
Sbjct: 98 PKDVV--HVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 155
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQNQ+E L L
Sbjct: 156 YVRSLQNQIEFLSMKL 171
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 351 VENLHKDL 358
+E L L
Sbjct: 232 IEFLSMKL 239
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 287 VPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKG 346
V ++RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K
Sbjct: 278 VKPRVRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKADKAS-MLDEIIDYVKF 336
Query: 347 LQNQVENL 354
LQ QV+ L
Sbjct: 337 LQLQVKVL 344
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 351 VENLHKDL 358
+E L L
Sbjct: 232 IEFLSMKL 239
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 351 VENLHKDL 358
+E L L
Sbjct: 232 IEFLSMKL 239
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 12/86 (13%)
Query: 280 LNIPEDSVPC-----------KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMD 328
LN P VP ++RA+RG AT P SIAER RR +IS ++K LQ+LVPN +
Sbjct: 276 LNAPPFMVPANGAAGNGAPKPRVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSN 335
Query: 329 KQTSYSDMLDLAVQHIKGLQNQVENL 354
+ T + MLD ++++K LQ QV+ L
Sbjct: 336 R-TDKASMLDEIIEYVKFLQLQVKVL 360
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 172 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 231
Query: 351 VENLHKDL 358
+E L L
Sbjct: 232 IEFLSMKL 239
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 169 VRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQ 228
Query: 351 VENLHKDL 358
+E L L
Sbjct: 229 IEFLSMKL 236
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 164 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIINYVQSLQNQ 223
Query: 351 VENLHKDL 358
VE L L
Sbjct: 224 VEFLSMKL 231
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 275 TVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYS 334
T DN + ED + +RA+RG AT+ S+AER RR +IS ++K LQDLVP K T +
Sbjct: 244 TKDNAGSPKEDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKA 301
Query: 335 DMLDLAVQHIKGLQNQVENLHKDL 358
MLD + +++ LQ QVE L L
Sbjct: 302 VMLDEIINYVQSLQRQVEFLSMKL 325
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +IS ++K LQ+LVPN +K T+ + MLD + ++K LQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 350 QVENL 354
QV+ L
Sbjct: 372 QVKVL 376
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 187 VRARRGQATDRHSLAERARREKISKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 246
Query: 351 VENLHKDL 358
VE L L
Sbjct: 247 VEFLSMKL 254
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP DK+T + MLD + +++ LQ Q
Sbjct: 231 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQ 290
Query: 351 VENLHKDL 358
VE L L
Sbjct: 291 VEFLSMKL 298
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +IS ++K LQ+LVPN +K T+ + MLD + ++K LQ
Sbjct: 313 RVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQL 371
Query: 350 QVENL 354
QV+ L
Sbjct: 372 QVKVL 376
>gi|47497310|dbj|BAD19352.1| unknown protein [Oryza sativa Japonica Group]
Length = 153
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 252 DIFNCLNALDSQFT-MPQTS-LEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERER 309
DI + L +SQF M TS LEMA +D L + D VP K+RAKRGCATHPRSIAER R
Sbjct: 73 DIISTLGGYESQFGGMASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAERVR 132
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +I+ ++K LQ+LVPN +K T + MLD ++++K LQ
Sbjct: 148 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 206
Query: 350 QVENL 354
QV+ L
Sbjct: 207 QVKVL 211
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +I+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 135 RVRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 193
Query: 350 QVENL 354
QV+ L
Sbjct: 194 QVKVL 198
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQDLVPN +K S MLD + ++K LQ
Sbjct: 314 RTRARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKADKAS-MLDEIIDYVKFLQL 372
Query: 350 QVENL 354
QV+ L
Sbjct: 373 QVKVL 377
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K T + MLD +
Sbjct: 347 PKDYI--HVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCNKVTGKAVMLDEIIN 404
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 405 YVQSLQRQVEFLSMKL 420
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 352 ENL 354
+ L
Sbjct: 248 KVL 250
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 184 PKDYV--HVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIIN 241
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 242 YVQSLQRQVEFLSMKL 257
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V IRAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 141 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 198
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 199 VQSLQRQVEFLSMKL 213
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT SIAER RR +I+ KL+ LQDLVP K + ML+ + ++ LQNQ
Sbjct: 149 VRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQNQ 208
Query: 351 VENLHKDLEHCTC 363
VE L +L +C
Sbjct: 209 VEFLSMELAAASC 221
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS +++ LQ+LVP DK T + MLD +
Sbjct: 131 PKDYI--HVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIIN 188
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQNQVE L L
Sbjct: 189 YVQTLQNQVEFLSMKL 204
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR RIS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 246 VRAKRGQATNSHSLAERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQ 305
Query: 351 VENLHKDL 358
VE L L
Sbjct: 306 VEFLSMKL 313
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N P + + +RAKRG AT S+AER RR +I+ KL+ LQDLVP K + MLD+
Sbjct: 132 NKPREVI--HVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVI 189
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQNQ+E L L
Sbjct: 190 INYVQSLQNQIEFLSMKL 207
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 284 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 341
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 342 YVRSLQRQVEFLSMKL 357
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N P + + +RAKRG AT S+AER RR +I+ KL+ LQDLVP K + MLD+
Sbjct: 111 NKPREVI--HVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVI 168
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQNQ+E L L
Sbjct: 169 INYVQSLQNQIEFLSMKL 186
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V IRAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 135 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 192
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 193 VQSLQRQVEFLSMKL 207
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N P + + +RAKRG AT S+AER RR +I+ KL+ LQDLVP K + MLD+
Sbjct: 115 NKPREVI--HVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVI 172
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQNQ+E L L
Sbjct: 173 INYVQSLQNQIEFLSMKL 190
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 352 ENL 354
+ L
Sbjct: 255 KVL 257
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 279 LLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
LL+ P++ + +RA+RG AT SIAER RR +I +L+ LQDLVP K + MLD
Sbjct: 192 LLDKPDEVI--HVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLD 249
Query: 339 LAVQHIKGLQNQVENLHKDL 358
+ ++ LQNQVE L ++L
Sbjct: 250 EIINYVHSLQNQVEFLSREL 269
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQDLVPN +K T + MLD + ++K L+
Sbjct: 180 KVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRL 238
Query: 350 QVENL 354
QV+ L
Sbjct: 239 QVKVL 243
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 380 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 437
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 438 YVQSLQRQVEFLSMKL 453
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 29 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQL 87
Query: 350 QVENL 354
QV+ L
Sbjct: 88 QVKVL 92
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 188 PRDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 246 YVQSLQRQVEFLSMKL 261
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 198 PKDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 256 YVQSLQRQVEFLSMKL 271
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 351 VENLHKDL 358
VE L L
Sbjct: 363 VEFLSMKL 370
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RAKRG AT S+AER RR +I+ +LK LQDLVP K + MLD+ +
Sbjct: 41 PKDVV--HVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIID 98
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQNQ+E L L
Sbjct: 99 YVRSLQNQIEFLSMKL 114
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 361
Query: 351 VENLHKDL 358
VE L L
Sbjct: 362 VEFLSMKL 369
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 198 PKDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 256 YVQSLQRQVEFLSMKL 271
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 351 VENLHKDL 358
VE L L
Sbjct: 363 VEFLSMKL 370
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V IRAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 133 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 190
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 191 VQSLQRQVEFLSMKL 205
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 367 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 424
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 425 YVQSLQRQVEFLSMKL 440
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 366 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 423
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 424 YVQSLQRQVEFLSMKL 439
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 198 PKDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 256 YVQSLQRQVEFLSMKL 271
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 158 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 216
Query: 350 QVE 352
QV+
Sbjct: 217 QVK 219
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 366 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 423
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 424 YVQSLQRQVEFLSMKL 439
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD + +
Sbjct: 133 EDYV--HVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINY 190
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 191 VQSLQRQVEFLSMKL 205
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 239
Query: 351 VENLHKDL 358
VE L L
Sbjct: 240 VEFLSMKL 247
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 366 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 423
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 424 YVQSLQRQVEFLSMKL 439
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 153 VRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKALMLDEIINYVQSLQNQ 212
Query: 351 VENLHKDL 358
VE L L
Sbjct: 213 VEFLSMKL 220
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 207
Query: 351 VENLHKDL 358
VE L L
Sbjct: 208 VEFLSMKL 215
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 379 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 436
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 437 YVQSLQRQVEFLSMKL 452
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 256 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 315
Query: 351 VENLHKDL 358
VE L L
Sbjct: 316 VEFLSMKL 323
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
IRA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 257 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 316
Query: 351 VENLHKDL 358
VE L L
Sbjct: 317 VEFLSMKL 324
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
IRA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 256 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 351 VENLHKDL 358
VE L L
Sbjct: 316 VEFLSMKL 323
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD + ++K LQ
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQV 201
Query: 350 QVENL 354
QV+ L
Sbjct: 202 QVKVL 206
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 281 NIPEDSVPCK----IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
NIP P + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +
Sbjct: 112 NIPAAEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASV 171
Query: 337 LDLAVQHIKGLQNQVENLHKDLE 359
LD + +I+ LQ QVE L LE
Sbjct: 172 LDEIINYIQSLQCQVEFLSMKLE 194
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 308
Query: 351 VENLHKDL 358
VE L L
Sbjct: 309 VEFLSMKL 316
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 351 VENLHKDL 358
VE L L
Sbjct: 308 VEFLSMKL 315
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP DK T + MLD + +++ LQ Q
Sbjct: 161 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 220
Query: 351 VENL 354
VE L
Sbjct: 221 VEFL 224
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 188 PRDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 246 YVQSLQRQVEFLSMKL 261
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 249 VRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 308
Query: 351 VENLHKDL 358
VE L L
Sbjct: 309 VEFLSMKL 316
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 188 PRDYV--HVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 245
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 246 YVQSLQRQVEFLSMKL 261
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 168 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIIN 225
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 226 YVQSLQQQVEFLSMKL 241
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V IRAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +
Sbjct: 113 EDYV--HIRAKRGQATNNHSLAERFRREKINERMKHLQDLVPGCNKITGKAMMLDEIINY 170
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 171 VQSLQRQVEFLSMKL 185
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 352 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 409
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 410 YVQSLQRQVEFLSMKL 425
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RAKRG AT P+S+ R RR +I+ +LK LQ+LVPN K MLD A+ ++K LQ
Sbjct: 441 KPRAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQT 499
Query: 350 QVENLHKD 357
QVE L D
Sbjct: 500 QVELLKSD 507
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQDLVPN +K T + MLD + ++K L+
Sbjct: 131 KVRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRL 189
Query: 350 QVENL 354
QV+ L
Sbjct: 190 QVKVL 194
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 168 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 227
Query: 351 VENLHKDL 358
VE L L
Sbjct: 228 VEFLSMKL 235
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 351 VENLHKDL 358
VE L L
Sbjct: 245 VEFLSMKL 252
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 351 VENLHKDL 358
VE L L
Sbjct: 245 VEFLSMKL 252
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 629 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 688
Query: 351 VENLHKDL 358
VE L L
Sbjct: 689 VEFLSMKL 696
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 168 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKVLQDLVPGCNKVVGKALMLDEIIN 225
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 226 YVQSLQQQVEFLSMKL 241
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
DN + ED + +RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + M
Sbjct: 248 DNAGSPKEDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVM 305
Query: 337 LDLAVQHIKGLQNQVENLHKDL 358
LD + +++ LQ QVE L L
Sbjct: 306 LDEIINYVQSLQRQVEFLSMKL 327
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 202 VRARRGQATDSHSLAERARREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 261
Query: 351 VENLHKDL 358
VE L L
Sbjct: 262 VEFLSMKL 269
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
IRA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 246 IRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 305
Query: 351 VENLHKDL 358
VE L L
Sbjct: 306 VEFLSMKL 313
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR RIS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 234 VRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 293
Query: 351 VENLHKDL 358
VE L L
Sbjct: 294 VEFLSMKL 301
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 333 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 390
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 391 YVQSLQRQVEFLSMKL 406
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 351 VENLHKDL 358
VE L L
Sbjct: 308 VEFLSMKL 315
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 174 VRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALMLDEIINYVQSLQNQ 233
Query: 351 VENLHKDL 358
VE L L
Sbjct: 234 VEFLSMKL 241
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 344 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 401
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 402 YVQSLQRQVEFLSMKL 417
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
DN + ED + +RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + M
Sbjct: 248 DNAGSPKEDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVM 305
Query: 337 LDLAVQHIKGLQNQVENLHKDL 358
LD + +++ LQ QVE L L
Sbjct: 306 LDEIINYVQSLQRQVEFLSMKL 327
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 256 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 315
Query: 351 VENLHKDL 358
VE L L
Sbjct: 316 VEFLSMKL 323
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 257 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 314
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 315 YVQSLQRQVEFLSMKL 330
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
Query: 343 HIKGLQNQVENL 354
+++ LQNQVE L
Sbjct: 235 YVQFLQNQVEFL 246
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 340 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 397
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 398 YVQSLQRQVEFLSMKL 413
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQD+VP +K T + +LD + +I+ LQ Q
Sbjct: 141 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQSLQRQ 200
Query: 351 VENLHKDLEHCTCGCKPTS 369
VE L LE P +
Sbjct: 201 VEFLSMKLEAVNLNMNPET 219
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 351 VENLHKDL 358
VE L L
Sbjct: 245 VEFLSMKL 252
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V IRAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 101 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 158
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 159 VQSLQRQVEFLSMKL 173
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 307
Query: 350 QVENLHK 356
QV ++ +
Sbjct: 308 QVLSMSR 314
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 185 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 244
Query: 351 VENLHKDL 358
VE L L
Sbjct: 245 VEFLSMKL 252
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA+RG AT P SIAER RR +IS ++K LQ+LVPN +K S MLD + ++K LQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNK-ADKSSMLDEIIDYVKFLQLQV 380
Query: 352 ENL 354
+ L
Sbjct: 381 KVL 383
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 138 LRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINYVQSLQRQ 197
Query: 351 VENLHKDL 358
VE L L
Sbjct: 198 VEFLSMKL 205
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + +++ LQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 352 ENL 354
+ L
Sbjct: 254 KVL 256
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 147 VRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 206
Query: 351 VENLHKDL 358
VE L L
Sbjct: 207 VEFLSMKL 214
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 185 VRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQ 244
Query: 351 VENLHKDL 358
VE L L
Sbjct: 245 VEFLSMKL 252
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 351 VENLHKDL 358
VE L L
Sbjct: 240 VEFLSMKL 247
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 371 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 430
Query: 351 VENLHKDL 358
VE L L
Sbjct: 431 VEFLSMKL 438
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR RIS+++K LQDLVP +K + MLD +
Sbjct: 179 PKDYV--HVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIIN 236
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 237 YVQSLQRQVEFLSMKL 252
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +IS ++K LQ+LVPN ++ T + MLD ++++K LQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 350 QVE 352
QV+
Sbjct: 356 QVK 358
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 305 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQQQ 364
Query: 351 VENLHKDL 358
VE L L
Sbjct: 365 VEFLSMKL 372
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 351 VENLHKDL 358
VE L L
Sbjct: 429 VEFLSMKL 436
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 351 VENL 354
VE L
Sbjct: 171 VEFL 174
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
DN + ED + +RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + M
Sbjct: 305 DNAGSPKEDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVM 362
Query: 337 LDLAVQHIKGLQNQVENLHKDL 358
LD + +++ LQ QVE L L
Sbjct: 363 LDEIINYVQSLQRQVEFLSMKL 384
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 351 VENLHKDLEHCT--CGCKPT 368
VE L LE G PT
Sbjct: 206 VEFLSMKLEAVNSRMGMNPT 225
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 164 VRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 223
Query: 351 VENLHKDL 358
VE L L
Sbjct: 224 VEFLSMKL 231
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I++++K LQDLVP +K T + MLD + +++ LQ+Q
Sbjct: 296 VRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDEIINYVQSLQHQ 355
Query: 351 VENLHKDL 358
VE L L
Sbjct: 356 VEFLSMKL 363
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 241 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 300
Query: 351 VENLHKDL 358
VE L L
Sbjct: 301 VEFLSMKL 308
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 111 VRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 170
Query: 351 VENL 354
VE L
Sbjct: 171 VEFL 174
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 237 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 296
Query: 351 VENLHKDL 358
VE L L
Sbjct: 297 VEFLSMKL 304
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 351 VENLHKDL 358
VE L L
Sbjct: 318 VEFLSMKL 325
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 407 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 466
Query: 351 VENLHKDL 358
VE L L
Sbjct: 467 VEFLSMKL 474
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS ++K LQ LVP +K T + MLD + +++ LQ Q
Sbjct: 247 VRARRGQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQ 306
Query: 351 VENLHKDL 358
VE L L
Sbjct: 307 VEFLSMKL 314
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V IRAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 26 EDYV--HIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 83
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 84 VQSLQRQVEFLSMKL 98
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 363 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 420
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 421 YVQSLQRQVEFLSMKL 436
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 253 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 312
Query: 351 VENLHKDL 358
VE L L
Sbjct: 313 VEFLSMKL 320
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RAK+GCA P+SIA R+RR RIS +LK LQ+L+PN K ML+ A+ ++K LQ
Sbjct: 407 KPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQL 465
Query: 350 QVENLHKD 357
QV+ L D
Sbjct: 466 QVKVLMND 473
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 252 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 311
Query: 351 VENLHKDL 358
VE L L
Sbjct: 312 VEFLSMKL 319
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 248 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 305
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ+QVE L L
Sbjct: 306 YVQSLQHQVEFLSMKL 321
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 351 VENLHKDL 358
VE L L
Sbjct: 318 VEFLSMKL 325
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 351 VENLHKDL 358
VE L L
Sbjct: 318 VEFLSMKL 325
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 135 VRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKAVMLDEIINYVQSLQNQ 194
Query: 351 VENLHKDL 358
VE L L
Sbjct: 195 VEFLSMKL 202
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 111 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 170
Query: 351 VENL 354
VE L
Sbjct: 171 VEFL 174
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 253 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 312
Query: 351 VENLHKDL 358
VE L L
Sbjct: 313 VEFLSMKL 320
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 351 VENLHKDL 358
VE L L
Sbjct: 240 VEFLSMKL 247
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 204
Query: 351 VENLHKDL 358
VE L L
Sbjct: 205 VEFLSMKL 212
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 171 VRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKALMLDEIINYVQSLQNQ 230
Query: 351 VENLHKDL 358
VE L L
Sbjct: 231 VEFLSMKL 238
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +I+ ++K LQ+LVPN +K + MLD ++++K LQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNK-VDKASMLDEIIEYVKFLQL 297
Query: 350 QVENL 354
QV+ L
Sbjct: 298 QVKVL 302
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 277 DNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
DN + ED + +RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + M
Sbjct: 356 DNAGSPKEDYI--HVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVM 413
Query: 337 LDLAVQHIKGLQNQVENLHKDL 358
LD + +++ LQ QVE L L
Sbjct: 414 LDEIINYVQSLQRQVEFLSMKL 435
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 150 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 208 YVQSLQQQVEFLSMKL 223
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 172 VRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 231
Query: 351 VENLHKDL 358
VE L L
Sbjct: 232 VEFLSMKL 239
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 121 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 180
Query: 351 VENL 354
VE L
Sbjct: 181 VEFL 184
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RAK+GCA P+SIA R+RR RIS +LK LQ+L+PN K ML+ A+ ++K LQ
Sbjct: 407 KPRAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSK-VDLVTMLEKAINYVKFLQL 465
Query: 350 QVENLHKD 357
QV+ L D
Sbjct: 466 QVKVLMND 473
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 241 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 300
Query: 351 VENLHKDL 358
VE L L
Sbjct: 301 VEFLSMKL 308
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 125 VRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIINYVQSLQNQ 184
Query: 351 VENL 354
VE L
Sbjct: 185 VEFL 188
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 112 VRARRGQATDSHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQ 171
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 172 VEFLSMKLE 180
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 249 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 308
Query: 351 VENLHKDL 358
VE L L
Sbjct: 309 VEFLSMKL 316
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 157 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 216
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 217 VEFLSMKLE 225
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 109 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQ 168
Query: 351 VENL 354
VE L
Sbjct: 169 VEFL 172
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 46/73 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT SIAER RR +I+ KL+ LQD+VP K + ML+ + ++ LQNQ
Sbjct: 158 VRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVHSLQNQ 217
Query: 351 VENLHKDLEHCTC 363
VE L +L +C
Sbjct: 218 VEFLSMELAAASC 230
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 291 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 350
Query: 351 VENLHKDL 358
VE L L
Sbjct: 351 VEFLSMKL 358
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 150 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 208 YVQSLQQQVEFLSMKL 223
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250
Query: 351 VENLHKDL 358
VE L L
Sbjct: 251 VEFLSMKL 258
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD +
Sbjct: 398 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 455
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 456 YVQSLQRQVEFLSMKL 471
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 152 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 209
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 210 YVQSLQQQVEFLSMKL 225
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 191 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQ 250
Query: 351 VENLHKDL 358
VE L L
Sbjct: 251 VEFLSMKL 258
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 93 VRARRGQATDSHSLAERARRERISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQQQ 152
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 153 VEFLSMKLE 161
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 196 VEFLSMKLE 204
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 210 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 267
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ+QVE L L
Sbjct: 268 YVQSLQHQVEFLSMKL 283
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 196 VEFLSMKLE 204
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP+ +K T + MLD + +++ LQ Q
Sbjct: 32 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVMLDEIINYVQSLQRQ 91
Query: 351 VENLHKDL 358
VE L L
Sbjct: 92 VEFLSMKL 99
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 172 VRARRGQATDSHSLAERVRREKISERMKILQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 231
Query: 351 VENLHKDL 358
VE L L
Sbjct: 232 VEFLSMKL 239
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 234 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 293
Query: 351 VENLHKDL 358
VE L L
Sbjct: 294 VEFLSMKL 301
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 120 VRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQ 179
Query: 351 VENL 354
VE L
Sbjct: 180 VEFL 183
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 107 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 166
Query: 351 VENL 354
VE L
Sbjct: 167 VEFL 170
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 196 VEFLSMKLEAVNSRMNP 212
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +
Sbjct: 142 EDYV--HVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 199
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 200 VQSLQRQVEFLSMKL 214
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 167 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQ 226
Query: 351 VENLHKDL 358
VE L L
Sbjct: 227 VEFLSMKL 234
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 142 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 201
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 202 VEFLSMKLE 210
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 122 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 181
Query: 351 VENL 354
VE L
Sbjct: 182 VEFL 185
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 134 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 193
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 194 VEFLSMKLE 202
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 196 VEFLSMKLEAVNSRMNP 212
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 123 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 181
Query: 350 QVENL 354
QV+ L
Sbjct: 182 QVKVL 186
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQDLVP K T + MLD + +++ LQ Q
Sbjct: 341 VRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 400
Query: 351 VENLHKDL 358
VE L L
Sbjct: 401 VEFLSMKL 408
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 302 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 361
Query: 351 VENLHKDL 358
VE L L
Sbjct: 362 VEFLSMKL 369
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 223 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 282
Query: 351 VENL 354
+E L
Sbjct: 283 IEFL 286
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 246 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 303
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 304 YVQSLQRQVEFLSMKL 319
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 271 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 328
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 329 YVQSLQRQVEFLSMKL 344
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQDLVP K T + MLD + +++ LQ Q
Sbjct: 341 VRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 400
Query: 351 VENLHKDL 358
VE L L
Sbjct: 401 VEFLSMKL 408
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 131 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKAMVLDEIINYVQSLQNQ 190
Query: 351 VENL 354
VE L
Sbjct: 191 VEFL 194
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 351 VENL 354
VE L
Sbjct: 199 VEFL 202
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++ LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 131 VRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 190
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 191 VEFLSMKLEAVNSQMNP 207
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 351 VENLHKDL 358
VE L L
Sbjct: 688 VEFLSMKL 695
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 196 VEFLSMKLEAVNSRMNP 212
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 125 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 184
Query: 351 VENLHKDL 358
VE L L
Sbjct: 185 VEFLSMKL 192
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 388 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 447
Query: 351 VENL 354
VE+L
Sbjct: 448 VESL 451
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 358 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 417
Query: 351 VENLHKDL 358
VE L L
Sbjct: 418 VEFLSMKL 425
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 351 VENLHKDL 358
VE L L
Sbjct: 688 VEFLSMKL 695
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD +
Sbjct: 141 PKDYI--HVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 198
Query: 343 HIKGLQNQVENLHKDLE 359
+I+ LQ QVE L LE
Sbjct: 199 YIQSLQRQVEFLSMKLE 215
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 125 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 184
Query: 351 VENL 354
VE L
Sbjct: 185 VEFL 188
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 137 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 196
Query: 351 VENL 354
VE L
Sbjct: 197 VEFL 200
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP DK T + MLD + +++ LQ Q
Sbjct: 150 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQ 209
Query: 351 VENL 354
VE L
Sbjct: 210 VEFL 213
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 150 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 207
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 208 YVQSLQQQVEFLSMKL 223
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 205
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 206 VEFLSMKLE 214
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +I+ +LK LQD+VP K + MLD + +++ LQNQ
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 351 VENLHKDL 358
VE L L
Sbjct: 207 VEFLSMKL 214
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 138 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 197
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 198 VEFLSMKLEAVNTRMTP 214
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP +K T + MLD +
Sbjct: 295 PKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 353 YVQSLQRQVEFLSMKL 368
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 351 VENL 354
VE L
Sbjct: 199 VEFL 202
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 274 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 331
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 332 YVQSLQRQVEFLSMKL 347
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 125 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 184
Query: 351 VENL 354
VE L
Sbjct: 185 VEFL 188
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 351 VENLHKDL 358
VE L L
Sbjct: 688 VEFLSMKL 695
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT S+AER RR RI+ KL+ LQDLVP K + MLD+ + +++ LQNQ
Sbjct: 121 VRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIINYVQSLQNQ 180
Query: 351 VE 352
+E
Sbjct: 181 IE 182
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 284 EDSVP---CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
ED P +RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD
Sbjct: 113 EDEPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEI 172
Query: 341 VQHIKGLQNQVENL 354
+ +++ LQNQVE L
Sbjct: 173 INYVQSLQNQVEFL 186
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 211 VEFLSMKLE 219
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 168 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 227
Query: 351 VENL 354
+E L
Sbjct: 228 IEFL 231
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 115 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 173
Query: 350 QVENL 354
QV+ L
Sbjct: 174 QVKVL 178
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 350 QVENL 354
QV+ L
Sbjct: 191 QVKVL 195
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP +K T + MLD +
Sbjct: 293 PKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 350
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 351 YVQSLQRQVEFLSMKL 366
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 267 PQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPN 326
P+++L+ AT + P+ +RA+RG AT S+AER RR +IS ++K LQDLVP
Sbjct: 41 PRSTLKGATSKRPQDFPKQDY-IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 99
Query: 327 MDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
K T + MLD + +++ LQ QVE L L
Sbjct: 100 CSKVTGKAVMLDEIINYVQSLQRQVEFLSMKL 131
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +I+ +LK LQD+VP K + MLD + +++ LQNQ
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 351 VENLHKDL 358
VE L L
Sbjct: 207 VEFLSMKL 214
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 350 QVENL 354
QV+ L
Sbjct: 191 QVKVL 195
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 139 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 198
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 199 VEFLSMKLE 207
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 114 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 172
Query: 350 QVENL 354
QV+ L
Sbjct: 173 QVKVL 177
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 258 PKDFI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 315
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 316 YVQSLQRQVEFLSMKL 331
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P D V +RA+RG AT S+AER RR +I+ K+K LQDLVP +K + MLD +
Sbjct: 171 PRDYV--HVRARRGQATDSHSLAERVRREKITIKMKMLQDLVPGCNKVIGKALMLDEIIN 228
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 229 YVQSLQQQVEFLSMKL 244
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S++ER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 105 VRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALILDEIINYVRSLQNQ 164
Query: 351 VENL 354
VE L
Sbjct: 165 VEFL 168
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 124 VRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQ 183
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 184 VEFLSMKLE 192
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 241 PPSKRTKTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLNIPEDSVPCK---------- 290
PP +K+ DG+ L +S+F+ Q ++ N+ P K
Sbjct: 197 PPLNTSKSADGEQPKGLPWENSEFSKEQEEKKLKIDQNMSPNLRGKQPNKHAKDNSSNGE 256
Query: 291 --------IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD +
Sbjct: 257 APKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIIN 316
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 317 YVQSLQQQVEFLSMKL 332
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 350 QVENL 354
QV+ L
Sbjct: 191 QVKVL 195
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + MLD + +++ LQ Q
Sbjct: 211 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQ 270
Query: 351 VENLHKDL 358
VE L L
Sbjct: 271 VEFLSMKL 278
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP +K T + MLD +
Sbjct: 295 PKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 353 YVQSLQRQVEFLSMKL 368
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENLHKDL 358
VE L L
Sbjct: 201 VEFLSMKL 208
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+++K T + MLD V ++K L+
Sbjct: 168 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRL 226
Query: 350 QVENL 354
QV+ L
Sbjct: 227 QVKVL 231
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR +I+ ++K LQ+LVPN K S MLD ++++K LQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVDKAS-MLDEIIEYVKFLQL 408
Query: 350 QVENL 354
QV+ L
Sbjct: 409 QVKVL 413
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 258 PKDFI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 315
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 316 YVQSLQRQVEFLSMKL 331
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 274 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 331
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 332 YVQSLQRQVEFLSMKL 347
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 144 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 203
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 204 VEFLSMKLEAVNSRLSP 220
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQD+VP +K + +LD + +I+ LQ+Q
Sbjct: 100 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQ 159
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 160 VEFLFMKLE 168
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENL 354
VE L
Sbjct: 201 VEFL 204
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 130 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 189
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 190 VEFLSMKLE 198
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENL 354
VE L
Sbjct: 201 VEFL 204
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT SIAER RR +I+ +LK LQD+VP K + MLD + +++ LQNQ
Sbjct: 136 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 195
Query: 351 VENLHKDL 358
VE L L
Sbjct: 196 VEFLSMKL 203
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 151 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 208
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 209 YVQSLQQQVEFLSMKL 224
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+++K T + MLD V ++K L+
Sbjct: 165 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVDYVKFLRL 223
Query: 350 QVENL 354
QV+ L
Sbjct: 224 QVKVL 228
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 273 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 330
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 331 YVQSLQRQVEFLSMKL 346
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 95 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 154
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 155 VEFLSMKLE 163
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENL 354
VE L
Sbjct: 201 VEFL 204
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP +K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENL 354
VE L
Sbjct: 201 VEFL 204
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP DK T + MLD + +++ LQ Q
Sbjct: 172 MRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQ 231
Query: 351 VENL 354
+E L
Sbjct: 232 IEFL 235
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 151 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 208
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 209 YVQSLQQQVEFLSMKL 224
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 232 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 291
Query: 351 VENLHKDL 358
VE L L
Sbjct: 292 VEFLSMKL 299
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS +++ LQ+LVP DK T + MLD + +++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 351 VENLHKDL 358
VE L L
Sbjct: 196 VEFLSMKL 203
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 221 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 280
Query: 351 VENLHKDL 358
VE L L
Sbjct: 281 VEFLSMKL 288
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 269 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 328
Query: 351 VENLHKDL 358
VE L L
Sbjct: 329 VEFLSMKL 336
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 121 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDEILDYVKFLRL 179
Query: 350 QVENL 354
QV+ L
Sbjct: 180 QVKVL 184
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 151 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 208
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 209 YVQSLQQQVEFLSMKL 224
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ+Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQ 187
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 188 VEFLSMKLE 196
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ+Q
Sbjct: 91 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQHQ 150
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 151 VEFLSMKLE 159
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 59 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 118
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 119 VEFLSMKLE 127
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 351 VENL 354
VE L
Sbjct: 206 VEFL 209
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 151 PKDYV--HVRARRGQATDSHSLAERVRREKISQRMKFLQDLVPGCNKVVGKALMLDEIIN 208
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 209 YVQSLQQQVEFLSMKL 224
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 74 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 133
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 134 VEFLSMKLEAVNTRMNP 150
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 274 ATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
A L P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K
Sbjct: 255 AGASKLPEPPKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGK 312
Query: 334 SDMLDLAVQHIKGLQNQVENLHKDL 358
+ MLD + +++ LQ QVE L L
Sbjct: 313 AVMLDEIINYVQSLQRQVEFLSMKL 337
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD V ++K L+
Sbjct: 168 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRL 226
Query: 350 QVENL 354
QV+ L
Sbjct: 227 QVKVL 231
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 21 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 78
Query: 343 HIKGLQNQVENL 354
+++ LQ QVE L
Sbjct: 79 YVQSLQRQVEFL 90
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 263 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 322
Query: 351 VENLHKDL 358
VE L L
Sbjct: 323 VEFLSMKL 330
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 196 VEFLSMKLE 204
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQD+VP +K + +LD + +I+ LQ+Q
Sbjct: 100 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQ 159
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 160 VEFLSMKLE 168
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 211 VEFLSMKLE 219
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
+D +RA+RG AT SIAER RR +I+ +LK LQD+VP K + MLD + +
Sbjct: 142 KDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINY 201
Query: 344 IKGLQNQVENLHKDL 358
++ LQNQVE L L
Sbjct: 202 VQSLQNQVEFLSMKL 216
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 268 QTSLEMATVDNLLNIPEDSVPCK-----IRAKRGCATHPRSIAERERRTRISRKLKKLQD 322
+T +E ++ + P+ + P K +RA+RG AT S+AER RR +IS ++K LQD
Sbjct: 123 KTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQATDSHSLAERARREKISERMKILQD 182
Query: 323 LVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
LVP +K + +LD + +I+ LQ QVE L LE
Sbjct: 183 LVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 219
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK-----QTSYSDMLDLAVQHI 344
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++
Sbjct: 284 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKASMLDEIIDYV 343
Query: 345 KGLQNQ 350
K LQ Q
Sbjct: 344 KFLQLQ 349
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 246 PKDYI--HFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 303
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 304 YVQSLQRQVEFLSMKL 319
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 351 VENL 354
VE L
Sbjct: 224 VEFL 227
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 351 VENL 354
VE L
Sbjct: 206 VEFL 209
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA++G AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 351 VENLHKDL 358
VE L L
Sbjct: 236 VEFLSMKL 243
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK + +LD + ++K LQNQ
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYVKSLQNQ 167
Query: 351 VENL 354
VE L
Sbjct: 168 VEFL 171
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 275 TVDNL----LNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQ 330
TVDN +++ +D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K
Sbjct: 104 TVDNAKPSSVSVKQDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKV 161
Query: 331 TSYSDMLDLAVQHIKGLQNQVENLHKDL 358
T + MLD + +++ LQ QVE L L
Sbjct: 162 TGKAVMLDEIINYVQALQCQVEFLSMKL 189
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
++RA+RG AT P SIAER RR +IS ++K LQ+LVPN +K T + ML+ +++IK LQ
Sbjct: 280 ARVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQ 338
Query: 349 NQVENL 354
Q + L
Sbjct: 339 LQTKVL 344
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 351 VENL 354
VE L
Sbjct: 224 VEFL 227
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 129 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 188
Query: 351 VENL 354
VE L
Sbjct: 189 VEFL 192
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 240 VRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 299
Query: 351 VENLHKDL 358
VE L L
Sbjct: 300 VEFLSMKL 307
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 195
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 196 VEFLSMKLE 204
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 139 VRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQ 198
Query: 351 VENL 354
VE L
Sbjct: 199 VEFL 202
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD V ++K L+
Sbjct: 150 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRL 208
Query: 350 QVENL 354
QV+ L
Sbjct: 209 QVKVL 213
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++ LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 194 VRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQ 253
Query: 351 VENLHKDL 358
VE L L
Sbjct: 254 VEFLSMKL 261
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 259 VRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKAVMLDEIINYVQSLQRQ 318
Query: 351 VENLHKDL 358
VE L L
Sbjct: 319 VEFLSMKL 326
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K+RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 23 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 81
Query: 350 QVENL 354
QV+ L
Sbjct: 82 QVKVL 86
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD V ++K L+
Sbjct: 174 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRL 232
Query: 350 QVENL 354
QV+ L
Sbjct: 233 QVKVL 237
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +
Sbjct: 118 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 175
Query: 344 IKGLQNQVENLHKDL 358
++ LQ QVE L L
Sbjct: 176 VQSLQRQVEFLSMKL 190
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 150 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 209
Query: 351 VENLHKDL 358
VE L L
Sbjct: 210 VEFLSMKL 217
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 284 EDSVPCK----IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDL 339
E S P K +RA+RG AT S+AER RR +I ++K LQ LVP+ +K T + MLD
Sbjct: 247 EKSEPVKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQSLVPSCNKITGKALMLDE 306
Query: 340 AVQHIKGLQNQVENLHKDL 358
+ +++ LQ QVE L L
Sbjct: 307 IINYVQSLQRQVEFLSMKL 325
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQD+VP +K + +LD + +I+ LQ Q
Sbjct: 137 VRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQ 196
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 197 VEFLSMKLEAVNSRLAP 213
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +
Sbjct: 119 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 344 IKGLQNQVENLHKDL 358
++ LQ Q+E L L
Sbjct: 177 VQSLQRQIEFLSMKL 191
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 151 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 211 VEFLSMKLE 219
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQD+VP K T + MLD + +++ LQ Q
Sbjct: 141 VRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINYVQSLQQQ 200
Query: 351 VENLHKDL 358
VE L L
Sbjct: 201 VEFLSMKL 208
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK + +LD + ++K LQNQ
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 167
Query: 351 VENL 354
VE L
Sbjct: 168 VEFL 171
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 76 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 135
Query: 351 VENLHKDL 358
VE L L
Sbjct: 136 VEFLSMKL 143
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS ++K LQ LVP +K T + MLD + +++ LQ Q
Sbjct: 111 VRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQ 170
Query: 351 VENLHKDL 358
VE L L
Sbjct: 171 VEFLSMKL 178
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 325 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 384
Query: 351 VENLHKDL 358
VE L L
Sbjct: 385 VEFLSMKL 392
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 171 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 230
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 231 VEFLSMKLEAVNSRIGP 247
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 369 VRARRGQATNSHSLAERVRREKISERMKFLQELVPGCSKVTGKAVMLDEIINYVQSLQRQ 428
Query: 351 VENLHKDL 358
VE L L
Sbjct: 429 VEFLSMKL 436
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP K T + MLD +
Sbjct: 250 PKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIIN 307
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 308 YVQSLQRQVEFLSMKL 323
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +
Sbjct: 119 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 176
Query: 344 IKGLQNQVENLHKDL 358
++ LQ Q+E L L
Sbjct: 177 VQSLQRQIEFLSMKL 191
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ+Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQ 187
Query: 351 VENLHKDL 358
VE + K L
Sbjct: 188 VEFMFKYL 195
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQ LVPN +K S MLD + ++K LQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQL 373
Query: 350 QVENL 354
QV+ L
Sbjct: 374 QVKVL 378
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQ LVPN +K S MLD + ++K LQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQL 373
Query: 350 QVENL 354
QV+ L
Sbjct: 374 QVKVL 378
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +
Sbjct: 93 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 150
Query: 344 IKGLQNQVENLHKDL 358
++ LQ Q+E L L
Sbjct: 151 VQSLQRQIEFLSMKL 165
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 337
Query: 351 VENLHKDL 358
VE L L
Sbjct: 338 VEFLSMKL 345
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK + +LD + ++K LQNQ
Sbjct: 108 VRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 167
Query: 351 VENL 354
VE L
Sbjct: 168 VEFL 171
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQ LVPN +K S MLD + ++K LQ
Sbjct: 315 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQL 373
Query: 350 QVENL 354
QV+ L
Sbjct: 374 QVKVL 378
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD V ++K L+
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDYVKFLRL 156
Query: 350 QVENL 354
QV+ L
Sbjct: 157 QVKVL 161
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 54 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 113
Query: 351 VENLHKDL 358
VE+L L
Sbjct: 114 VESLSMKL 121
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDL P +K + +LD + +I+ LQ Q
Sbjct: 114 VRARRGQATDSHSLAERARREKISERMKILQDLAPGCNKVIGKALVLDEIINYIQSLQRQ 173
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 174 VEFLSMKLE 182
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS ++K LQ LVP +K T + MLD + +++ LQ Q
Sbjct: 81 VRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQ 140
Query: 351 VENLHKDL 358
VE L L
Sbjct: 141 VEFLSMKL 148
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT +AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 151 VRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 210
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 211 VEFLSMKLE 219
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 242 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 301
Query: 351 VENLHKDL 358
VE L L
Sbjct: 302 VEFLSMKL 309
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LV N +K T + MLD + ++K LQ
Sbjct: 144 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 202
Query: 350 QVENLHK 356
QV ++ +
Sbjct: 203 QVLSMSR 209
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS+++K LQDLVP +K + MLD +
Sbjct: 68 PKDYI--HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 125
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 126 YVQSLQRQVEFLSMKL 141
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 82 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 141
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 142 VEFLSMKLE 150
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 239 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 298
Query: 351 VENLHKDL 358
VE L L
Sbjct: 299 VEFLSMKL 306
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 43/68 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG A S+AER RR +IS K+ LQ LVP DK T + MLD + +++ LQNQ
Sbjct: 157 VRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIISYVQSLQNQ 216
Query: 351 VENLHKDL 358
VE L L
Sbjct: 217 VEFLSMKL 224
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LV N +K T + MLD + ++K LQ
Sbjct: 116 RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDYVKFLQL 174
Query: 350 QVENLHK 356
QV ++ +
Sbjct: 175 QVLSMSR 181
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RIS ++K LQ+LVP+ +K T + MLD + ++K
Sbjct: 137 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVK 195
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 196 FLRLQVKVL 204
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RIS ++K LQ+LVP+ +K T + MLD + ++K
Sbjct: 136 SIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDYVK 194
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 195 FLRLQVKVL 203
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
ED V +RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +
Sbjct: 123 EDYV--HVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINY 180
Query: 344 IKGLQNQVENLHKDL 358
++ LQ Q+E L L
Sbjct: 181 VQSLQRQIEFLSMKL 195
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQCQ 317
Query: 351 VENLHKDL 358
VE L L
Sbjct: 318 VEFLSMKL 325
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDL+P +K + MLD + +++ LQ Q
Sbjct: 192 VRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQ 251
Query: 351 VENLHKDL 358
VE L L
Sbjct: 252 VEFLSMKL 259
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDL+P +K + MLD + +++ LQ Q
Sbjct: 192 VRARRGQATDSHSLAERVRREKISERMKYLQDLIPGCNKVAGKAGMLDEIINYVQSLQRQ 251
Query: 351 VENLHKDL 358
VE L L
Sbjct: 252 VEFLSMKL 259
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
+ RA+RG AT P SIAER RR +IS ++K LQ LVPN +K S MLD + ++K LQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKADKAS-MLDEIIDYVKFLQL 296
Query: 350 QVENL 354
QV+ L
Sbjct: 297 QVKVL 301
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +++ LQ Q
Sbjct: 99 VRARRGQATDNHSLAERARREKISERMKILQDLVPGCNKVIGKAFVLDGIINYVQSLQRQ 158
Query: 351 VENLHKDLEHCT--CGCKPT 368
VE L LE + KPT
Sbjct: 159 VEFLSMKLEAVSSRLSMKPT 178
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 187
Query: 351 VENLHKDLEHCTCGCKP 367
VE L LE P
Sbjct: 188 VEFLSMKLEAVNSRIAP 204
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQD+VP +K + +LD + +I+ LQ Q
Sbjct: 123 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 182
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 183 VEFLSMKLE 191
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 33 VRARRGQATDSHSLAERVRREKISERMKTLQDLVPGCSKVTGKAMMLDEIINYVQSLQRQ 92
Query: 351 VENLHKDL 358
VE L L
Sbjct: 93 VEFLSMKL 100
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD V ++K L+
Sbjct: 156 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRL 214
Query: 350 QVENL 354
QV+ L
Sbjct: 215 QVKVL 219
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK + +LD + ++K LQNQ
Sbjct: 42 VRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYVKSLQNQ 101
Query: 351 VENL 354
VE L
Sbjct: 102 VEFL 105
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA RG AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 352 ENLHK 356
++ +
Sbjct: 299 LSMSR 303
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP D+ T + +LD + +++ LQNQ
Sbjct: 145 VRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQNQ 204
Query: 351 VENLHKDL 358
VE L L
Sbjct: 205 VEFLSMKL 212
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 351 VENL 354
VE L
Sbjct: 203 VEFL 206
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++ LQDLVP ++ T + MLD +
Sbjct: 185 PKDYI--HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIIN 242
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 243 YVQSLQRQVEFLSMKL 258
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 351 VENL 354
VE L
Sbjct: 224 VEFL 227
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS K+ LQD++P +K + +LD +
Sbjct: 148 PKDYI--HVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 205
Query: 343 HIKGLQNQVENLHKDLEHCTCGC 365
+I+ LQ QVE L LE G
Sbjct: 206 YIQSLQRQVEFLSMKLEVVNSGA 228
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP +K T + MLD V ++K L+
Sbjct: 19 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 77
Query: 350 QVENL 354
QV+ L
Sbjct: 78 QVKVL 82
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AV+++K LQ
Sbjct: 258 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 316
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 317 QIKLLSSD 324
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 284 EDSVPCK----IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDL 339
E+ P K +RA+RG AT S+AER RR +IS ++K LQDL+P +K + +LD
Sbjct: 129 EEKSPLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDLIPGCNKIIGKALVLDE 188
Query: 340 AVQHIKGLQNQVENLHKDLE 359
+ +I+ LQ QVE L LE
Sbjct: 189 IINYIQSLQRQVEFLSMKLE 208
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS K+ LQD++P +K + +LD +
Sbjct: 147 PKDYI--HVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIIN 204
Query: 343 HIKGLQNQVENLHKDLEHCTCGC 365
+I+ LQ QVE L LE G
Sbjct: 205 YIQSLQRQVEFLSMKLEVVNSGA 227
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 351 VENL 354
VE L
Sbjct: 203 VEFL 206
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++ LQDLVP ++ T + MLD +
Sbjct: 188 PKDYI--HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIIN 245
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 246 YVQSLQRQVEFLSMKL 261
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQD+VP +K + +LD + +I+ LQ Q
Sbjct: 50 VRARRGQATDSHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQ 109
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 110 VEFLSMKLE 118
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 133 VRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 192
Query: 351 VENLHKDLE 359
E L LE
Sbjct: 193 AEFLSMKLE 201
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 47 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQ 106
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 107 VEFLSMKLE 115
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RIS ++K LQ+LVPN +K T + ++D + ++K L+
Sbjct: 133 RVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDYVKFLRL 191
Query: 350 QVENL 354
QV+ L
Sbjct: 192 QVKVL 196
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 282 IPEDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ D +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP DK + +LD
Sbjct: 175 VESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEI 234
Query: 341 VQHIKGLQNQVENL 354
+ H++ LQ QVE L
Sbjct: 235 INHVQTLQRQVEML 248
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 285 DSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
D +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP DK + +LD + H
Sbjct: 177 DKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINH 236
Query: 344 IKGLQNQVENL 354
++ LQ QVE L
Sbjct: 237 VQSLQRQVEML 247
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P D V +RA+RG AT S+AER RR +I+ K+K LQDLVP +K + MLD +
Sbjct: 62 PRDYV--HVRARRGQATDSHSLAERVRREKITLKMKMLQDLVPGCNKVIGKALMLDEIIN 119
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 120 YVQSLQQQVEFLSMKL 135
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA++G AT+ S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 174 VRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEIINYVQSLQRQ 233
Query: 351 VENLHKDL 358
VE L L
Sbjct: 234 VEFLSMKL 241
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N+P+ +RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD
Sbjct: 64 NLPKQDY-IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 122
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQ Q+E L L
Sbjct: 123 INYVQSLQRQIEFLSMKL 140
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 153 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 212
Query: 351 VENL 354
VE L
Sbjct: 213 VEFL 216
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD V ++K L+
Sbjct: 57 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVDYVKFLRL 115
Query: 350 QVENL 354
QV+ L
Sbjct: 116 QVKVL 120
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP +K T + M+D +
Sbjct: 212 PKDYI--HVRARRGQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIIN 269
Query: 343 HIKGLQNQVENLHKDLE 359
+++ LQ QVE L LE
Sbjct: 270 YVQSLQCQVEFLSMKLE 286
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT SIAER RR +I+ KL+ LQDLVP + + ML+ + ++ LQNQ
Sbjct: 148 VRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVMLEEIINYVHSLQNQ 207
Query: 351 VENLHKDL 358
VE L +L
Sbjct: 208 VEFLSMEL 215
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 163 VRARRGQATNSHSLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 222
Query: 351 VENLHKDL 358
VE L L
Sbjct: 223 VEFLSMKL 230
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D V +RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD +
Sbjct: 150 PKDVV--HVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIIN 207
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQNQVE L L
Sbjct: 208 YVQSLQNQVEFLSMKL 223
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 124 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 183
Query: 351 VENL 354
+E L
Sbjct: 184 IEFL 187
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP +K T + MLD V ++K L+
Sbjct: 15 RVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVDYVKFLRL 73
Query: 350 QVENL 354
Q++ L
Sbjct: 74 QIKVL 78
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 145 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 351 VENLHKDL 358
VE L L
Sbjct: 205 VEFLSMKL 212
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 202
Query: 351 VENL 354
VE L
Sbjct: 203 VEFL 206
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K + + MLD V ++K L+
Sbjct: 179 RVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEIVDYVKFLRL 237
Query: 350 QVENL 354
QV+ L
Sbjct: 238 QVKVL 242
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ ++K LQ+LVP +K T + M+D V ++K L+
Sbjct: 162 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEIVDYVKFLRL 220
Query: 350 QVENL 354
QV+ L
Sbjct: 221 QVKVL 225
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 1028 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 1087
Query: 351 VENLHKDL 358
VE L L
Sbjct: 1088 VEFLSMKL 1095
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AV+++K LQ
Sbjct: 254 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 312
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 313 QIKLLSSD 320
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 284 EDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
ED +P +RA+RG AT S+AER RR +I++++K LQ+LVP +K + + +LD +
Sbjct: 169 EDMLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIIN 228
Query: 343 HIKGLQNQVENL 354
H++ LQ QVE L
Sbjct: 229 HVQSLQCQVEFL 240
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AV+++K LQ
Sbjct: 253 KARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVEYVKFLQL 311
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 312 QIKLLSSD 319
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 351 VENL 354
VE L
Sbjct: 206 VEFL 209
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 79 VRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 138
Query: 351 VENLHKDL 358
VE L L
Sbjct: 139 VEFLSMKL 146
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQFLQRQ 65
Query: 351 VE 352
VE
Sbjct: 66 VE 67
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 282 IPEDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ D +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP DK +LD
Sbjct: 175 VESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEI 234
Query: 341 VQHIKGLQNQVENL 354
+ H++ LQ QVE L
Sbjct: 235 INHVQTLQRQVEML 248
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS +++ LQ+LVP K T + MLD + +++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQSLQKQ 205
Query: 351 VE 352
VE
Sbjct: 206 VE 207
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 98 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 157
Query: 351 VENLHKDL 358
+E L L
Sbjct: 158 IEFLSMKL 165
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 351 VENLHKDL 358
VE L L
Sbjct: 266 VEFLSMKL 273
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + +LD + +I+ L +Q
Sbjct: 112 VRARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQ 171
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 172 VEFLSMKLE 180
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 204 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 263
Query: 351 VENLHKDL 358
VE L L
Sbjct: 264 VEFLSMKL 271
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K T + MLD +
Sbjct: 52 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIIN 109
Query: 343 HIKGLQNQVENLHKDL 358
+++ LQ QVE L L
Sbjct: 110 YVQSLQRQVEFLSMKL 125
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AVQ++K LQ Q+
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 246
Query: 352 ENLHKD 357
+ L D
Sbjct: 247 KLLSSD 252
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP +K + MLD + +++ LQ Q
Sbjct: 143 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQ 202
Query: 351 VENLHKDL 358
VE L L
Sbjct: 203 VEFLSMKL 210
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 1039 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 1098
Query: 351 VENLHKDL 358
VE L L
Sbjct: 1099 VEFLSMKL 1106
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQDLVP +K + +LD + +++ L+ Q
Sbjct: 114 VRARRGQATDSHSLAERARREKITERMKILQDLVPGCNKVIGKASVLDEIINYVQALERQ 173
Query: 351 VENLHKDLEHCTC 363
VE L LE
Sbjct: 174 VEFLSMKLEAVNA 186
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AVQ++K LQ Q+
Sbjct: 188 RANRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQLQI 246
Query: 352 ENLHKD 357
+ L D
Sbjct: 247 KLLSSD 252
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K R++RG AT P+SI R RR +I+ +LK LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 245 KSRSERGSATDPQSIYARRRREKINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 303
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 304 QIKLLSSD 311
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 153 VRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 212
Query: 351 VENLHKDL 358
VE L L
Sbjct: 213 VEFLSMKL 220
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 284 EDSVP---CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
ED P +RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD
Sbjct: 137 EDEKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEI 196
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQNQVE L L
Sbjct: 197 INYVQSLQNQVEFLSMKL 214
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 267 PQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPN 326
P+++L+ AT ++P+ +RA+RG AT S+AER RR +IS ++K LQDLVP
Sbjct: 53 PRSTLKGATSKPPQDLPKQDY-IHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPG 111
Query: 327 MDKQTSYSDMLDLAVQHIKGLQNQVENL 354
K T + MLD + +++ LQ Q+E L
Sbjct: 112 CSKVTGKAVMLDEIINYVQSLQRQIEFL 139
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+++ LQ LVP DK T + +LD + +++ LQNQ
Sbjct: 138 VRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQ 197
Query: 351 VENLHKDL 358
VE L L
Sbjct: 198 VEFLSMKL 205
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
+ P+++ +RA+RG AT S+AER RR RIS ++K LQ+LVP K + LD
Sbjct: 122 DAPKETDYIHVRARRGQATDSHSLAERVRRERISERMKYLQELVPGCSKIMGKASTLDEI 181
Query: 341 VQHIKGLQNQVENLHKDL 358
+ +++ LQ QVE L L
Sbjct: 182 INYVQSLQRQVEFLSMKL 199
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 351 VENL 354
VE L
Sbjct: 214 VEFL 217
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 275 TVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYS 334
T DN ED + IRA+ G AT+ S+AER RR +IS ++K LQDLVP K +
Sbjct: 249 TEDNSDAPKEDYI--HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKA 306
Query: 335 DMLDLAVQHIKGLQNQVENLHKDL 358
MLD + +++ LQ QVE L L
Sbjct: 307 VMLDEIINYVQSLQRQVEFLSMKL 330
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 16 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 75
Query: 351 VENLHKDL 358
VE L L
Sbjct: 76 VEFLSMKL 83
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 351 VE 352
VE
Sbjct: 61 VE 62
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQ+LVP DK + +LD + H++ LQ Q
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 263
Query: 351 VENLHKDL 358
VE L L
Sbjct: 264 VEMLSMRL 271
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 215 KSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQL 273
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 274 QIKLLSSD 281
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQ+LVP DK + +LD + H++ LQ Q
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 263
Query: 351 VENLHKDL 358
VE L L
Sbjct: 264 VEMLSMRL 271
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +++ LQ Q
Sbjct: 154 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQ 213
Query: 351 VENLHKDL 358
VE L L
Sbjct: 214 VEFLSMKL 221
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 275 TVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYS 334
T DN ED + IRA+ G AT+ S+AER RR +IS ++K LQDLVP K +
Sbjct: 249 TEDNSDAPKEDYI--HIRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKA 306
Query: 335 DMLDLAVQHIKGLQNQVENLHKDL 358
MLD + +++ LQ QVE L L
Sbjct: 307 VMLDEIINYVQSLQRQVEFLSMKL 330
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K R+ RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 223 KSRSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 282 QIKLLSSD 289
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA+RG AT P SIAER RR RI+ +++ LQ+LVPN +K T + MLD + ++K L+
Sbjct: 125 KQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 183
Query: 350 QVENL 354
QV+ L
Sbjct: 184 QVKVL 188
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 69 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQ 128
Query: 351 VENLHKDL 358
+E L L
Sbjct: 129 IEFLSMKL 136
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT+ S+AER RR +I+ ++K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 154 VRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 213
Query: 351 VENLHKDL 358
VE L L
Sbjct: 214 VEFLSMKL 221
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 216
Query: 351 VENLHKDL 358
VE L L
Sbjct: 217 VEFLSMKL 224
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+SI R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 206 KTRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 264
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 265 QIKLLSSD 272
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQ+LVP DK + +LD + H++ LQ Q
Sbjct: 200 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQ 259
Query: 351 VENL 354
VE L
Sbjct: 260 VEML 263
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ+LVP +K + MLD + +++ LQ Q
Sbjct: 6 VRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQSLQQQ 65
Query: 351 VENL 354
VE L
Sbjct: 66 VEFL 69
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AT S+AER RR +I ++K LQDLVP K T + MLD +
Sbjct: 250 PKDYI--HVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKAVMLDEIIN 307
Query: 343 HIKGLQNQVE 352
+++ LQ QVE
Sbjct: 308 YVQSLQRQVE 317
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 324 QIKLLSSD 331
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 263 KTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 350 QVENL 354
Q++ L
Sbjct: 322 QIKLL 326
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 62.8 bits (151), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 44/62 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS+K+K LQDLVP +K T + MLD + +++ LQ Q
Sbjct: 37 VRARRGQATDSHSLAERARREKISKKMKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQ 96
Query: 351 VE 352
VE
Sbjct: 97 VE 98
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 264 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 322
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 323 QIKLLSSD 330
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
IRA+ G AT+ S+AER RR +IS ++K LQDLVP K + MLD + +++ LQ Q
Sbjct: 265 IRARSGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQ 324
Query: 351 VENLHKDL 358
VE L L
Sbjct: 325 VEFLSMKL 332
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG A S+AER RR +IS K+K LQ LVP DK T +LD + +I LQ+Q
Sbjct: 136 VRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSLQDQ 195
Query: 351 VENLHKDL 358
V++L ++L
Sbjct: 196 VKSLMEEL 203
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA++G A P+SIA R RR RIS +LK LQ L+PN DK ML+ A+ +++ L+
Sbjct: 638 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEF 696
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 697 QIKMLKND 704
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP K T + ML+ + +++ LQ Q
Sbjct: 6 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQSLQRQ 65
Query: 351 VENLHKDL 358
+E L L
Sbjct: 66 IEFLSMKL 73
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 324 QIKLLSSD 331
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R +RG AT S+AER RR +I+ ++K LQ+LVP DK + + +LD + H++ LQ Q
Sbjct: 200 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQ 259
Query: 351 VENLHKDL 358
VE L L
Sbjct: 260 VEILSMKL 267
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 262 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 320
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 321 QIKLLSSD 328
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++ LQDLVP +K + +LD + +I+ LQ Q
Sbjct: 84 VRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEIINYIQSLQCQ 143
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 144 VEFLSMKLE 152
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 236 KARAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ L+D+VP K + MLD + +++ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 207
Query: 351 VENLHKDL 358
VE L L
Sbjct: 208 VEFLSMKL 215
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+L P +K T + MLD + +++ LQ Q
Sbjct: 206 MRARRGQATNSHSLAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQ 265
Query: 351 VENLHKDL 358
VE L L
Sbjct: 266 VEFLSMKL 273
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RAKRG AT P+S+ R RR RI+ +LK LQ LVPN K ML+ A+ ++K LQ
Sbjct: 210 KPRAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAK-VDIVTMLEEAIHYVKFLQL 268
Query: 350 QVENLHKD 357
QV L D
Sbjct: 269 QVNMLSSD 276
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
K RA++G A P+SIA R RR RIS +LK LQ L+PN DK ML+ A+ +++ L+
Sbjct: 752 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLE 810
Query: 349 NQVENLHKD 357
Q++ L D
Sbjct: 811 LQIKMLKND 819
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 236 KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTK-VHISTMLEEAVQYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 62.0 bits (149), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/68 (47%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQDLVP+ K T + MLD + +++ LQ Q
Sbjct: 25 VRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINYVQSLQRQ 84
Query: 351 VENLHKDL 358
+E L L
Sbjct: 85 IEFLSMKL 92
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 281 NIPEDSVP---CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDML 337
N+ ED P +RAKRG AT S+AER RR +I+ KL+ LQ++VP K + ML
Sbjct: 114 NMIEDKKPNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIML 173
Query: 338 DLAVQHIKGLQNQVENLHKDL 358
D + +++ LQ+QVE L L
Sbjct: 174 DEIINYVQSLQHQVEFLSMKL 194
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R +RG AT S+AER RR +I+ ++K LQ+LVP DK + + +LD + H++ LQ Q
Sbjct: 206 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSLQRQ 265
Query: 351 VENLHKDL 358
VE L L
Sbjct: 266 VEILSMKL 273
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA++G A P+SIA R RR RIS +LK LQ L+PN DK ML+ A+ +++ L+
Sbjct: 821 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAISYVQCLEF 879
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 880 QIKMLKND 887
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 246 KPRASRGSATDPQSLYARKRRERINERLRILQSLVPNGTK-VDISTMLEEAVQYVKFLQL 304
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 305 QIKLLSSD 312
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQNQ 207
Query: 351 VENLHKDL 358
VE L L
Sbjct: 208 VELLSMKL 215
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA +G AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 223 KTRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 281
Query: 350 QVENL 354
Q++ L
Sbjct: 282 QIKLL 286
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 284 EDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
E+ +P +RA+RG AT S+AER RR +I++++K LQ+LVP +K + + +LD +
Sbjct: 174 EEKLPYVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIIN 233
Query: 343 HIKGLQNQVENL 354
H++ LQ QVE L
Sbjct: 234 HVQFLQRQVEIL 245
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 344
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 345 QIKLLSSD 352
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 286 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 344
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 345 QIKLLSSD 352
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 279 LLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK-----QTSY 333
LL+ P++ + +RA+RG AT SIAER RR +I +L+ LQDLVP K
Sbjct: 138 LLDKPDEVI--HVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGM 195
Query: 334 SDMLDLAVQHIKGLQNQVENLHKDL 358
+ MLD + ++ LQNQVE L ++L
Sbjct: 196 AVMLDEIINYVHSLQNQVEFLSREL 220
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 183 KSRASRGSATDPQSLYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 241
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 242 QIKLLSSD 249
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA+RG AT P+S+ R RR +I+ +LK LQ LVPN K MLD A+ +++ LQ
Sbjct: 441 KPRARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQL 499
Query: 350 QVENLHKD 357
QV L D
Sbjct: 500 QVTLLKSD 507
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R++RG AT S+AER RR RI ++K LQDLVP +K + LD + +I+ LQ Q
Sbjct: 143 VRSRRGQATDSHSLAERARRERIGERMKILQDLVPGCNKVIGKALALDEIINYIQSLQCQ 202
Query: 351 VENLHKDLE 359
VE L LE
Sbjct: 203 VEFLSMKLE 211
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG +T P+S+ R+RR RI+ +LK LQ LVPN K S ML+ AV ++K LQ
Sbjct: 214 KARAARGASTDPQSLYARKRRERINERLKTLQTLVPNGTK-VDMSTMLEEAVHYVKFLQL 272
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 273 QIKVLSSD 280
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA++G A P+SIA R RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ
Sbjct: 357 KPRARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQL 415
Query: 350 QVENLHKD 357
QV+ L D
Sbjct: 416 QVKVLTSD 423
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 263 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQL 321
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 322 QIKLLSSD 329
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA G AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 263 KSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 322 QIKLLSSD 329
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RAKRG AT P+S+ R RR +I+ +LK LQ LVPN +Q ML+ A+ +K L+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPN-GEQVDIVTMLEEAIHFVKFLEFQL 529
Query: 352 ENLHKD 357
E L D
Sbjct: 530 ELLRSD 535
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R +RG AT S+AER RR +I+ ++K LQ+LVP +K + + +LD + H++ LQN+
Sbjct: 188 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNE 247
Query: 351 VENLHKDL 358
VE L L
Sbjct: 248 VEILSMKL 255
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ A Q++K LQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 253
Query: 352 ENLHKD 357
+ L D
Sbjct: 254 KLLSCD 259
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQ+LVP +K + + +LD + H++ LQ Q
Sbjct: 201 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQ 260
Query: 351 VENL 354
VE L
Sbjct: 261 VEFL 264
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 92 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 150
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 151 QIKLLSSD 158
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
+RA+ G AT R++AER RR +I+ KL+ LQ++VP K + MLD + +++ LQ
Sbjct: 151 VNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEIINYVQSLQ 210
Query: 349 NQVENL 354
NQVE L
Sbjct: 211 NQVEFL 216
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R +RG AT S+AER RR +I+ ++K LQ+LVP +K + + +LD + H++ LQN+
Sbjct: 192 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQNE 251
Query: 351 VENLHKDL 358
VE L L
Sbjct: 252 VEILSMKL 259
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +L+ LQD+VP K + MLD + +++ LQNQ
Sbjct: 73 VRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQ 132
Query: 351 VENLHKDL 358
VE L L
Sbjct: 133 VEFLSMKL 140
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ A Q++K LQ Q+
Sbjct: 191 RASRGAATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAAQYVKFLQLQI 249
Query: 352 ENLHKD 357
+ L D
Sbjct: 250 KLLSSD 255
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
SV K RA +G AT P+S+ R+RR +I+ +LK LQ+LVPN K S ML+ AV ++K
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVK 220
Query: 346 GLQNQVENLHKD 357
LQ Q++ L D
Sbjct: 221 FLQLQIKLLSSD 232
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
PED + +RA++G AT S+ ER RR +IS ++K LQ+LVP +K T + MLD +
Sbjct: 126 PEDYI--HVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGKAFMLDEIIN 183
Query: 343 HIKGLQNQVE 352
+++ LQ QVE
Sbjct: 184 YVQSLQRQVE 193
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQ+LVP +K + + +LD + H++ LQ Q
Sbjct: 197 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSLQRQ 256
Query: 351 VENL 354
VE L
Sbjct: 257 VEFL 260
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ KLK LQ++VP K + MLD + +++ LQ+Q
Sbjct: 152 VRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 211
Query: 351 VENLHKDL 358
VE L L
Sbjct: 212 VEFLSMKL 219
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 260 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVNYVKFLQL 318
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 319 QIKLLSSD 326
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA+RG AT ++AER RR +I+ KL+ LQ++VP K S + MLD + +++ LQ+QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 352 ENLHKDL 358
E L +L
Sbjct: 212 EFLSLEL 218
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RAKRG AT S+AER RR +I+ KL+ LQ++VP K + MLD + +++ LQ+Q
Sbjct: 133 VRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYVQSLQHQ 192
Query: 351 VENLHKDL 358
VE L L
Sbjct: 193 VEFLSMKL 200
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT S+AE R +I +++K LQDLVP K T +DMLD + +++ LQ
Sbjct: 10 RVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQSLQC 69
Query: 350 QVENLHKDL 358
Q E+L L
Sbjct: 70 QAESLSMKL 78
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ A Q++K LQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAAQYVKFLQLQI 255
Query: 352 ENLHKD 357
+ L D
Sbjct: 256 KLLSSD 261
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
SV K RA +G AT P+S+ R+RR +I+ +LK LQ+LVPN K S ML+ AV ++K
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVK 220
Query: 346 GLQNQVENLHKD 357
LQ Q++ L D
Sbjct: 221 FLQLQIKLLSSD 232
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AV ++ LQ
Sbjct: 271 KTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVNFLQL 329
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 330 QIKLLSSD 337
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++ LQ LVP DK T + +L+ + +++ LQ+Q
Sbjct: 119 VRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVLEEIINYVQSLQHQ 178
Query: 351 VENLHKDL 358
VE L L
Sbjct: 179 VEFLSMKL 186
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R +RG AT S+AER RR +I+ ++K LQ+LVP +K + + +LD + H++ LQ++
Sbjct: 160 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHE 219
Query: 351 VENLHKDL 358
VE L L
Sbjct: 220 VEILSMKL 227
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
G AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV+ L
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVL 321
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+ AT+ SIAE+ RR +IS ++K LQDLVP K T + MLD + +++ LQ Q
Sbjct: 148 VRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 207
Query: 351 VENLHKDL 358
VE L L
Sbjct: 208 VEFLSMKL 215
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS +++ LQ+LVP +K T + MLD + +I+ LQ Q
Sbjct: 48 MRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQ 107
Query: 351 VENL 354
VE L
Sbjct: 108 VEFL 111
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 273 KTRASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTK-VDISTMLEEAVNYVKFLQT 331
Query: 350 QVE 352
Q++
Sbjct: 332 QIK 334
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
G AT P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV+ L
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVL 321
>gi|326509201|dbj|BAJ86993.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 23/83 (27%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK----------------------- 329
K+ ++H RSIAE RRT IS++++ LQ+LVPNM+K
Sbjct: 200 VKKDRSSHRRSIAELRRRTEISKRVRNLQELVPNMEKIIKQTIGTPKPYTDMDLPGINPL 259
Query: 330 QTSYSDMLDLAVQHIKGLQNQVE 352
T+ SDMLDLAV +IK LQ Q++
Sbjct: 260 PTNMSDMLDLAVDYIKELQMQIK 282
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AV ++K LQ
Sbjct: 236 KSRASRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G AT P+S+ R RR +I+ +LK LQ+LVPN K MLD A+ ++K LQNQVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAK-VDIVTMLDEAIHYVKFLQNQVELLK 59
Query: 356 KD 357
D
Sbjct: 60 SD 61
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT+ S+AER RR +IS ++K LQ LVP + T + ML+ + ++K LQ Q
Sbjct: 19 VRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 78
Query: 351 VENLHKDL 358
+E L L
Sbjct: 79 IEFLSMKL 86
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K R+++G A P+SIA R+RR RIS++LK LQDLVPN K ML+ A+ ++K +Q
Sbjct: 232 KPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQL 290
Query: 350 QVE 352
Q++
Sbjct: 291 QLQ 293
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA++G A P+SIA R RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ
Sbjct: 357 KPRARQGSANDPQSIAARHRRERISDRLKILQELVPNSTK-VDLVTMLEKAINYVKFLQL 415
Query: 350 QVE 352
QV+
Sbjct: 416 QVK 418
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +LK LQ +VPN K S ML+ AV ++K LQ
Sbjct: 269 KTRASRGAATDPQSLYARKRRERINERLKILQHIVPNGTK-VDISTMLEEAVHYVKFLQL 327
Query: 350 QVE 352
Q++
Sbjct: 328 QIK 330
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K R+++G A P+SIA R+RR RIS++LK LQDLVPN K ML+ A+ ++K +Q
Sbjct: 232 KPRSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSK-VDLVTMLEKAINYVKFMQL 290
Query: 350 QVE 352
Q++
Sbjct: 291 QLQ 293
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 282 IPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
+P ++V + +KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A+
Sbjct: 110 VPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAI 168
Query: 342 QHIKGLQNQVENL 354
+++K LQ QV+ L
Sbjct: 169 EYLKQLQLQVQML 181
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
SV K RA +G AT P+S+ R+RR +I+ +LK LQ+LVPN K S ML+ AV ++K
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVK 220
Query: 346 GLQNQVE 352
LQ Q++
Sbjct: 221 FLQLQIK 227
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ KL+ LQ++VP K + MLD + +++ LQ+Q
Sbjct: 156 VRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQ 215
Query: 351 VENL 354
VE L
Sbjct: 216 VEFL 219
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R +RG AT S+AER RR +I+ ++K LQ+LVP +K + + +LD + H++ LQ Q
Sbjct: 173 VRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTLQRQ 232
Query: 351 VENLHKDL 358
VE L L
Sbjct: 233 VEILSMKL 240
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ KL+ LQ++VP K + MLD + +++ LQ+Q
Sbjct: 157 VRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQ 216
Query: 351 VENLHKDL 358
VE L L
Sbjct: 217 VEFLSLKL 224
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AV ++K LQ
Sbjct: 236 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ KL+ LQ++VP K + MLD + +++ LQ+Q
Sbjct: 155 VRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQ 214
Query: 351 VENL 354
VE L
Sbjct: 215 VEFL 218
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP + T + ML+ + ++K LQ Q
Sbjct: 150 VRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTGKAVMLEEIINYVKSLQRQ 209
Query: 351 VENLHKDL 358
+E L L
Sbjct: 210 IEFLSMKL 217
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR RI+ +L+ LQ LVPN K S ML+ AV ++K LQ
Sbjct: 236 KTRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTK-VDISTMLEEAVHYVKFLQL 294
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 295 QIKLLSSD 302
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSD------- 335
P+D + +RA+RG AT S+AER RR +IS ++K LQDLVP +K +S
Sbjct: 139 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFT 196
Query: 336 -------MLDLAVQHIKGLQNQVENL 354
MLD + +++ LQ QVE L
Sbjct: 197 LVTGKAVMLDEIINYVQSLQRQVEFL 222
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA++G A P+SIA R RR RIS +LK LQ L+PN DK ML+ A+ +++ L+
Sbjct: 47 KPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDK-VDMVTMLEKAITYVQCLEL 105
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 106 QIKMLKND 113
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 67/122 (54%), Gaps = 15/122 (12%)
Query: 247 KTLDGDIFNCLNALDSQFTMPQTSLEMATVDNLLN--------------IPEDSVPCKIR 292
K G+ F+ + A+DS+ M +++N ++ +P + P +
Sbjct: 123 KETAGNTFSSIAAVDSEAITVSRKRRMFSMENSVDDFGCDSEKGPEASDVPSNPAPSRSS 182
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 183 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 241
Query: 353 NL 354
L
Sbjct: 242 ML 243
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
G AT P SIAER RR RI+ ++K LQ+LVP+ +K T + MLD + ++K LQ QV+ L
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVL 226
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 284 EDSVP--CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
ED P +RA+RG AT S+AER RR +I+ +++ L++LVP K + + +LD +
Sbjct: 148 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 207
Query: 342 QHIKGLQNQVENL 354
H++ LQ QVE L
Sbjct: 208 NHVQSLQRQVEYL 220
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 58.5 bits (140), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K L++LVP DK + +LD + H++ LQ Q
Sbjct: 33 VRARRGQATDSHSLAERARREKINARMKLLRELVPGCDKIQGTALVLDEIINHVQSLQRQ 92
Query: 351 VENL 354
VE L
Sbjct: 93 VEML 96
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+R++RG AT+ S+AER RR +IS ++K LQDLVP +K T + +L+ + +++ LQ+Q
Sbjct: 112 LRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQSLQSQ 171
Query: 351 VENL 354
VE L
Sbjct: 172 VEIL 175
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR +I+ +L+ LQ+LVPN K S ML+ A+ ++K LQ
Sbjct: 183 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQL 241
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 242 QIKLLSSD 249
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA RG AT P+S+ R+RR +I+ +L+ LQ+LVPN K S ML+ A+ ++K LQ
Sbjct: 197 KARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTK-VDISTMLEDAIHYVKFLQL 255
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 256 QIKLLSSD 263
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RAKRG AT P+SI R+RR RI+ +L+ LQ LVPN K ML+ A+ ++K LQ
Sbjct: 236 KPRAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAK-VDIVTMLEEAINYVKFLQL 294
Query: 350 QV 351
Q+
Sbjct: 295 QL 296
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 21/98 (21%)
Query: 283 PEDSVPCK-----IRAKRGCATHPRSIAER----------------ERRTRISRKLKKLQ 321
P +S P K +RA+RG AT SIAER RR +IS ++K LQ
Sbjct: 111 PSESEPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQ 170
Query: 322 DLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
DLVP +K + +LD + +I+ LQ+QVE L LE
Sbjct: 171 DLVPGCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLE 208
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR RIS K+K LQ LVP D+ T + +LD +++++ L+++
Sbjct: 77 VRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIRYVQSLKDR 136
Query: 351 VENLHKDL 358
+ +L +L
Sbjct: 137 IGSLEAEL 144
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 284 EDSVP--CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
ED P +RA+RG AT S+AER RR +I+ +++ L++LVP K + + +LD +
Sbjct: 71 EDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEII 130
Query: 342 QHIKGLQNQVENL 354
H++ LQ QVE L
Sbjct: 131 NHVQSLQRQVEYL 143
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +++ L++LVP K + + +LD + H++ LQ Q
Sbjct: 180 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 239
Query: 351 VENLHKDL 358
VE L L
Sbjct: 240 VEYLSMRL 247
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA R T P+SI R+RR RI+ +LK LQ+LVPN K S ML+ AV ++K LQ
Sbjct: 225 KGRAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 283
Query: 350 QVENLHKD 357
Q+ L D
Sbjct: 284 QIRLLSSD 291
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ ++K LQ+LVP K + + +LD + H++ LQ +
Sbjct: 7 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSLQRE 66
Query: 351 VENL 354
VE L
Sbjct: 67 VEFL 70
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 299 THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
T P SIAER RR RI+ ++K LQ+LVPN +K T + MLD + ++K LQ QV+ L
Sbjct: 221 TDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSMSR 279
Query: 359 EHCTCGCKP 367
G P
Sbjct: 280 LGGAAGMAP 288
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ K +A RG A+ P+S+ R+RR RI+ +LK LQ LVPN K S ML+ AV ++K
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 346 GLQNQVENL 354
LQ Q++ L
Sbjct: 186 FLQLQIKLL 194
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
+RA+RG AT P SIAER RR +I+ ++K LQ+LVPN +K SY
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANKARSY 43
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +++ L++LVP K + + +LD + H++ LQ Q
Sbjct: 193 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 252
Query: 351 VENL 354
VE L
Sbjct: 253 VEYL 256
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +++ L++LVP K + + +LD + H++ LQ Q
Sbjct: 107 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 166
Query: 351 VENL 354
VE L
Sbjct: 167 VEYL 170
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G AT P+S+ R RR +I+ +LK LQ+LVPN K MLD A+ ++K LQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAK-VDIVTMLDEAIHYVKFLQTQVELLK 59
Query: 356 KD 357
D
Sbjct: 60 SD 61
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK 329
++RA+RG AT P SIAER RR RI+ ++K LQ+LVPN +K
Sbjct: 240 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 279
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +I+ +++ L++LVP K + + +LD + H++ LQ Q
Sbjct: 146 VRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQ 205
Query: 351 VENL 354
VE L
Sbjct: 206 VEYL 209
>gi|15242760|ref|NP_198306.1| SHI-related sequence 8 [Arabidopsis thaliana]
gi|332006506|gb|AED93889.1| SHI-related sequence 8 [Arabidopsis thaliana]
Length = 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 278 NLLNIPEDSVPCKIRAKRGCATHPRSIAER 307
N+ I EDSVPC++RAKRGCATHPRSIAER
Sbjct: 4 NMEKIFEDSVPCRVRAKRGCATHPRSIAER 33
>gi|47497385|dbj|BAD19423.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 110
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 23 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 81
Query: 348 QNQVENLHKD 357
Q QV+ ++ D
Sbjct: 82 QLQVQMIYPD 91
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
+ P + +KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K
Sbjct: 128 AAPLRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLK 186
Query: 346 GLQNQVENL 354
LQ QV+ L
Sbjct: 187 QLQLQVQML 195
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KRG A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KRG A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KRG A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 37 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQL 95
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 96 QLQVQML 102
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KRG A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KRG A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 317 SKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 375
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
+RA+RG AT S+AER RR RIS ++K L+ LVP +K T + MLD + +++ LQ
Sbjct: 150 VRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQSLQ 207
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + +KR A +++E+ RR++I+ KLK LQ+L+PN +K T + MLD A++++K L
Sbjct: 82 PPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEAIEYLKQL 140
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 141 QLQVQML 147
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + +KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K L
Sbjct: 116 PPRSSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQL 174
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 175 QLQVQYL 181
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 36 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 94
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 95 QLQVQML 101
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 38 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 96
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 97 QLQVQML 103
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 280 LNIPEDSVPCKI-RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
L + E P K+ A+R A +++ER RR RI+ K+K LQ+L+P+ +K T + MLD
Sbjct: 248 LALIERKPPLKLPTARRSRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLD 306
Query: 339 LAVQHIKGLQNQVENL 354
A++++K LQ QV+ +
Sbjct: 307 EAIEYLKTLQMQVQMM 322
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 36 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHL 94
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 95 QLQVQML 101
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
++A+RG A + S+AER RR +IS ++K LQ LVP + T + +LD + +++ LQ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 351 VENLHKDL 358
VE L L
Sbjct: 265 VEFLSMKL 272
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K +A +G AT P+S+ R+RR RI +L+ LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 239 KTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 297
Query: 350 QVENLHKD 357
Q + L D
Sbjct: 298 QNKLLSSD 305
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 282 IPEDSVP-CKIRAKRGCATHPRSIAER--------ERRTRISRKLKKLQDLVPNMDKQTS 332
+ D +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP DK
Sbjct: 119 VESDKLPYVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQG 178
Query: 333 YSDMLDLAVQHIKGLQNQVENL 354
+ +LD + H++ LQ QVE L
Sbjct: 179 TALVLDEIINHVQTLQRQVEML 200
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 23 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 81
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 82 QLQVQML 88
>gi|224069350|ref|XP_002302962.1| predicted protein [Populus trichocarpa]
gi|222844688|gb|EEE82235.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G A P+SIA + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L
Sbjct: 232 GPAKDPQSIAAKNRRERISERLKMLQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLA 290
Query: 356 KD 357
D
Sbjct: 291 TD 292
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
++A+RG A + S+AER RR +IS ++K LQ LVP + T + +LD + +++ LQ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 351 VENLHKDL 358
VE L L
Sbjct: 265 VELLSMKL 272
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 45 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 103
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 104 QLQVQML 110
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + R KR A +++E+ RR+RI+ K+K LQ L+PN K T + MLD A++++K L
Sbjct: 45 PARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQL 103
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 104 QLQVQML 110
>gi|102139852|gb|ABF70010.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 302
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K R+ R AT P+S+ ++RR RI+ +L+ LQ+LVPN K S ML+ AV+++K LQ
Sbjct: 203 KTRSNRWPATDPQSLYAKQRRERINARLRTLQNLVPNGTK-VDISTMLEEAVRYVKFLQL 261
Query: 350 QVENLHKD 357
Q++ L D
Sbjct: 262 QIKLLSSD 269
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R +RG AT P+S+ R RR +I+ +L+KLQ L+PN K MLD AV +++ L+ QV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQV 506
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 353 NL 354
L
Sbjct: 229 ML 230
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K L
Sbjct: 175 PSRSSTKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQL 233
Query: 348 QNQVENL 354
Q QV+ L
Sbjct: 234 QLQVQML 240
>gi|449445206|ref|XP_004140364.1| PREDICTED: putative transcription factor bHLH086-like [Cucumis
sativus]
Length = 284
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
+ P K + K A P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K
Sbjct: 176 AAPKKQKPKSATAKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVK 234
Query: 346 GLQNQVENLHKD 357
LQ QV+ L D
Sbjct: 235 FLQLQVKILATD 246
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 284 EDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
E+ VP + A KR AT +++ER+RR RI++K++ LQDL+PN +K + ML A+
Sbjct: 360 EEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLGEAI 418
Query: 342 QHIKGLQNQVENLHKDLEHC 361
++K LQ QV+ + C
Sbjct: 419 DYLKSLQLQVQMMSMGTRLC 438
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 353 NL 354
L
Sbjct: 213 ML 214
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 284 EDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
E+ VP + A KR AT +++ER+RR RI++K++ LQDL+PN +K + ML A+
Sbjct: 366 EEQVPARGSAGSKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNK-VDKASMLGEAI 424
Query: 342 QHIKGLQNQVENLHKDLEHC 361
++K LQ QV+ + C
Sbjct: 425 DYLKSLQLQVQMMSMGTRLC 444
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA A P+S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AVQ++K LQ
Sbjct: 263 KSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVQYVKFLQL 321
Query: 350 QVENL 354
Q++ L
Sbjct: 322 QIKLL 326
>gi|297788272|ref|XP_002862272.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297795123|ref|XP_002865446.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297307602|gb|EFH38530.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311281|gb|EFH41705.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 224
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ K ++ +G A+ P+S+ R+RR RI+ +LK LQ LVPN K S ML+ AV ++K
Sbjct: 128 SLKRKAKSNKGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 186
Query: 346 GLQNQVENLHKD 357
LQ Q++ L D
Sbjct: 187 FLQLQIKLLSSD 198
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R T P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ AVQ++K LQ Q++ L
Sbjct: 222 RQSTTDPQSLYARKRRERINERLKVLQNLVPNGTK-VDISTMLEEAVQYVKFLQLQIKLL 280
Query: 355 HKD 357
D
Sbjct: 281 SSD 283
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 170 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 228
Query: 353 NL 354
L
Sbjct: 229 ML 230
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+ + K R G A+ P+ + ++RR RI+ +LK LQ LVPN K S ML+ AVQ
Sbjct: 230 PDLKLKGKSRCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTK-VDISTMLEEAVQ 288
Query: 343 HIKGLQNQVENLHKD 357
++K LQ Q++ L D
Sbjct: 289 YVKFLQVQIKLLSSD 303
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK-QTSYSDM-LDLAVQHIKGLQ 348
+RA+RG AT S+AER RR +I+ ++K LQ+LVP K Q S + + LD + H++ LQ
Sbjct: 32 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQSLQ 91
Query: 349 NQVENLHKDLEHCT 362
QVE L L T
Sbjct: 92 RQVEFLSMRLAAVT 105
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + +KR A +++ER RR RI+ K+K LQ+L+PN +K T + MLD A++++K L
Sbjct: 11 PARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKML 69
Query: 348 QNQVENL 354
Q Q++ L
Sbjct: 70 QLQLQVL 76
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
+ P + +KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K
Sbjct: 150 AAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLK 208
Query: 346 GLQNQVENL 354
LQ QV+ L
Sbjct: 209 QLQLQVQML 217
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P + +KR A +++ER RR RI+ K+K LQ+L+PN +K T + MLD A++++K L
Sbjct: 11 PARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDEAIEYLKML 69
Query: 348 QNQVENL 354
Q Q++ L
Sbjct: 70 QLQLQVL 76
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 7/66 (10%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSD-------MLDLAVQHIKG 346
KR A +++ER RR RI+ K+K LQ+L+P +K +S++D MLD A++++K
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 347 LQNQVE 352
LQ QV+
Sbjct: 115 LQLQVQ 120
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 55.1 bits (131), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
KRG A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 58
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 353 NL 354
L
Sbjct: 211 ML 212
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 285 DSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHI 344
D++ K +A R AT +S+ R+RR RI+ +L+ LQ+LVPN K S ML+ AV+++
Sbjct: 204 DNLGGKAKADRRSATESQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVEYV 262
Query: 345 KGLQNQVENLHKD 357
K LQ Q++ L D
Sbjct: 263 KFLQLQIKLLSSD 275
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 9/80 (11%)
Query: 281 NIPEDSVPCKIRA--------KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTS 332
++ E+SV K +A KR A +++ER RR RI+ K++ LQ+L+PN +K
Sbjct: 433 DVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VD 491
Query: 333 YSDMLDLAVQHIKGLQNQVE 352
+ MLD A++++K LQ QV+
Sbjct: 492 KASMLDEAIEYLKTLQLQVQ 511
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 276 VDNLLNIPEDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
VD+L + +++ P K A +R A +++ER RR RI+ KL+ LQ+LVP+ +K T
Sbjct: 205 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 263
Query: 334 SDMLDLAVQHIKGLQNQVE 352
+ +LD A++++K LQ QV+
Sbjct: 264 ASILDEAIEYLKSLQMQVQ 282
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+RA+RG AT S+AER RR +IS ++K LQ LVP DK T + +LD + +++ L+++
Sbjct: 161 VRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALVLDEIISYVQFLKDR 220
Query: 351 VE 352
V+
Sbjct: 221 VQ 222
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 276 VDNLLNIPEDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
VD+L + +++ P K A +R A +++ER RR RI+ KL+ LQ+LVP+ +K T
Sbjct: 206 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 264
Query: 334 SDMLDLAVQHIKGLQNQVE 352
+ +LD A++++K LQ QV+
Sbjct: 265 ASILDEAIEYLKSLQMQVQ 283
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R A H +S ER RR RI++K+K LQ LVPN K T + MLD ++++K LQ QV
Sbjct: 244 RRTRAAAVHNQS--ERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQV 300
Query: 352 ENL 354
+ +
Sbjct: 301 QAM 303
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 353 NL 354
L
Sbjct: 201 ML 202
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 276 VDNLLNIPEDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
VD+L + +++ P K A +R A +++ER RR RI+ KL+ LQ+LVP+ +K T
Sbjct: 202 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 260
Query: 334 SDMLDLAVQHIKGLQNQVE 352
+ +LD A++++K LQ QV+
Sbjct: 261 ASILDEAIEYLKSLQMQVQ 279
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 451 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 509
Query: 353 NL 354
+
Sbjct: 510 MM 511
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 276 VDNLLNIPEDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
VD+L + +++ P K A +R A +++ER RR RI+ KL+ LQ+LVP+ +K T
Sbjct: 381 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 439
Query: 334 SDMLDLAVQHIKGLQNQVE 352
+ +LD A++++K LQ QV+
Sbjct: 440 ASILDEAIEYLKSLQMQVQ 458
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 353 NL 354
+
Sbjct: 388 MM 389
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ QV+
Sbjct: 329 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 387
Query: 353 NL 354
+
Sbjct: 388 MM 389
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 353 NL 354
L
Sbjct: 161 ML 162
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER+RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 431 SKRSRAAEVHNLSERKRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 489
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 276 VDNLLNIPEDSVPCKIRA--KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
VD+L + +++ P K A +R A +++ER RR RI+ KL+ LQ+LVP+ +K T
Sbjct: 305 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 363
Query: 334 SDMLDLAVQHIKGLQNQVE 352
+ +LD A++++K LQ QV+
Sbjct: 364 ASILDEAIEYLKSLQMQVQ 382
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
C AKR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ
Sbjct: 376 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQ 434
Query: 349 NQVENL 354
QV+ +
Sbjct: 435 LQVQMM 440
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 461 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 519
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ QV+
Sbjct: 311 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 369
Query: 353 NL 354
+
Sbjct: 370 MM 371
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 353 NL 354
L
Sbjct: 81 ML 82
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 367 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 425
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 353 NL 354
+
Sbjct: 324 MM 325
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
E+ +P K+ S++ER+RR +I++K++ LQ L+PN DK + MLD A+++
Sbjct: 367 EEEIPKSTSTKKKRIPQVHSLSERKRRDKINKKMRALQALIPNSDK-VDKASMLDKAIEY 425
Query: 344 IKGLQNQVENL 354
+K LQ Q++ +
Sbjct: 426 LKTLQLQLQMM 436
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 265 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 323
Query: 353 NL 354
+
Sbjct: 324 MM 325
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 274 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 332
Query: 353 NL 354
+
Sbjct: 333 MM 334
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQ 362
Query: 353 NL 354
+
Sbjct: 363 MM 364
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++E+ RR+RI+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 159 KRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 217
Query: 354 L 354
L
Sbjct: 218 L 218
>gi|242063834|ref|XP_002453206.1| hypothetical protein SORBIDRAFT_04g001650 [Sorghum bicolor]
gi|241933037|gb|EES06182.1| hypothetical protein SORBIDRAFT_04g001650 [Sorghum bicolor]
Length = 448
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 304 IAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
+AER RR +++ +L KL+ LVPN+ K S + D A+ +I GLQNQV+ L +LE
Sbjct: 188 VAERRRRKKLNDRLYKLRSLVPNISKMDRASILGD-AIDYIVGLQNQVKALQDELEDPAD 246
Query: 364 GCKP 367
G P
Sbjct: 247 GGAP 250
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N+P +S +KR + +++E+ RR RI+ K+K LQ+L+PN +K T + MLD A
Sbjct: 186 NLPRNS------SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEA 238
Query: 341 VQHIKGLQNQVENL 354
++++K LQ QV+ L
Sbjct: 239 IEYLKQLQLQVQML 252
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 289 CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
C AKR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ
Sbjct: 173 CSRGAKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQ 231
Query: 349 NQVENL 354
QV+ +
Sbjct: 232 LQVQMM 237
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A ++AER RR +I+ K+K LQ+L+P +K T S LD A++++K LQ+Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVST-LDAAIEYVKWLQSQIQM 193
Query: 354 L 354
+
Sbjct: 194 I 194
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A ++AER RR +I+ K+K LQ+L+P +K T S + D+ ++++K LQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDV-IEYMKSLQMQIQM 1197
Query: 354 L 354
+
Sbjct: 1198 M 1198
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A ++AER RR +I+ K+K LQ+L+P +K T S + D+ ++++K L+ Q+++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKSTKVSTLEDV-IEYVKSLEMQIQH 1627
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR ++AER RR +I+ +K LQ+L+P +K T S LD A++++K LQ+Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKSTKVST-LDDAIEYVKWLQSQIQM 639
Query: 354 L 354
+
Sbjct: 640 M 640
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A+ ++K LQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKAS-MLDEAIDYLKSLQLQVQR 313
Query: 354 LHKDLEHCTCGC 365
+ ++ + GC
Sbjct: 314 VQL-MQMMSMGC 324
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
A +++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 200
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
+RAKRG AT+ S+AER RR +IS ++K LQDLVP +K TS+
Sbjct: 138 LRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVTSF 180
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K S MLD A++++K LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKAS-MLDEAIEYLKTLQLQVQ 522
Query: 353 NL 354
+
Sbjct: 523 MM 524
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQ 324
Query: 353 NL 354
+
Sbjct: 325 MM 326
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ QV+
Sbjct: 324 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQ 382
Query: 353 NL 354
+
Sbjct: 383 MM 384
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 501
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 516
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P+D + +RA+RG AER RR +IS L LQDLVP+ + T +D LD +
Sbjct: 15 PKDYI--HVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEIIN 72
Query: 343 HIKGLQNQVENLHKDL 358
+++ L+ QVE L+ L
Sbjct: 73 YVQSLKRQVELLYMKL 88
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K S MLD A++++K LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKAS-MLDEAIEYLKTLQLQVQ 516
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+RG AT S+AER RR +I+ +++ L++LVP K + + +LD + H++ LQ QVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 353 NL 354
L
Sbjct: 61 YL 62
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKTLQLQVQ 380
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|226505756|ref|NP_001145730.1| uncharacterized protein LOC100279237 [Zea mays]
gi|219884203|gb|ACL52476.1| unknown [Zea mays]
Length = 304
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 39/186 (20%)
Query: 132 ASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQGRSSGGLGV------------- 178
A+SSL+RQ SSPAGFL HF + Y + R+S G+G
Sbjct: 129 AASSLIRQSSSPAGFLDHFGMDN----------GYGAMLRASMGMGFQDGGASDSLAGGG 178
Query: 179 ---SRLKSQLSFTGQDS--LSQISE-ESENGIDGVSS--GSGRQNATHSYSTASFGMDSW 230
RL QLSF+ + +SQISE +S+ + G SS G +A +
Sbjct: 179 GGSGRLGGQLSFSSRQGSLMSQISEMDSQEDVVGASSPDAGGGGDAAYMPGYPMSSGGWD 238
Query: 231 ENGTSIVFSAPPS--KRTKTLDGDIFNCLNALDSQFTMPQT-SLEMATVDNLLNIPEDSV 287
++ ++++ + P+ KR + D L QF++P+T S E+A ++ L +D+V
Sbjct: 239 DSSSALLPDSLPATNKRPR----DSLEHGGGLAHQFSLPKTSSSEVAAIEKFLQF-QDAV 293
Query: 288 PCKIRA 293
PCK+RA
Sbjct: 294 PCKVRA 299
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R KR A +++E+ RR +I+ K+K LQ LVPN K T + MLD A++++K LQ QV
Sbjct: 45 RGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKHLQLQV 103
Query: 352 ENL 354
+ L
Sbjct: 104 QML 106
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 261 DSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKL 320
+S M + +A + + PE P K R + + P+S+A R RR RIS K++ L
Sbjct: 116 NSMAAMREMIFRIAAMQPVHIDPESVKPPKRRNVK-ISKDPQSVAARHRRERISEKIRIL 174
Query: 321 QDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
Q LVP K + S MLD A+ ++K L+ QV++L +
Sbjct: 175 QRLVPGGTKMDTAS-MLDEAIHYVKFLKTQVQSLER 209
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R A H +S ER RR RI++K+K LQ LVPN K T + MLD ++++K LQ QV
Sbjct: 182 RRSRAAAIHNQS--ERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 238
Query: 352 ENL 354
+ +
Sbjct: 239 QMM 241
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K++ LQ+LVP+ +K T + MLD A++++K LQ Q++
Sbjct: 233 AKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYLKSLQLQLQ 291
Query: 353 NL 354
+
Sbjct: 292 VM 293
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P S P R R H + +ER RR RI+ KLK LQ+L+PN K T MLD A+
Sbjct: 7 PRRSTPPTTRRSRSAEFH--NFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAID 63
Query: 343 HIKGLQNQVENL 354
++K LQ Q++ L
Sbjct: 64 YLKSLQLQLQML 75
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E++RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 354 L 354
L
Sbjct: 149 L 149
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E++RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 90 KRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 354 L 354
L
Sbjct: 149 L 149
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R A H +S ER RR RI++K+K LQ LVPN K T + MLD ++++K LQ QV
Sbjct: 220 RRSRAAAIHNQS--ERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 276
Query: 352 ENL 354
+ +
Sbjct: 277 QMM 279
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E++RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 90 KRSIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 148
Query: 354 L 354
L
Sbjct: 149 L 149
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 290 KIRAKRGCATHPRSIAER-------------ERRTRISRKLKKLQDLVPNMDKQTSYSDM 336
K RA RG AT P+S+ R +RR RI+ +L+ LQ LVPN K S M
Sbjct: 236 KTRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTK-VDISTM 294
Query: 337 LDLAVQHIKGLQNQVENLHKD 357
L+ AVQ++K LQ Q++ L D
Sbjct: 295 LEEAVQYVKFLQLQIKLLSSD 315
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ QV+
Sbjct: 32 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQ 90
Query: 353 NL 354
+
Sbjct: 91 MM 92
>gi|224137582|ref|XP_002327162.1| predicted protein [Populus trichocarpa]
gi|222835477|gb|EEE73912.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 129 NLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 179
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 354 L 354
L
Sbjct: 161 L 161
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 271 LEMATVDNLLNIPEDSVPCKIRAKRG---CATHPRSIAERERRTRISRKLKKLQDLVPNM 327
L +T L N+P ++R KR + P+S+A R RR RIS +++ LQ VP
Sbjct: 359 LLFSTPLTLPNVPSMEEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGG 418
Query: 328 DKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
K + S MLD A+ ++K LQ Q++ L +
Sbjct: 419 TKMDTAS-MLDEAIHYVKFLQQQLQTLER 446
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K T + MLD A++++K LQ QV+
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQM 371
Query: 354 L 354
+
Sbjct: 372 M 372
>gi|224077304|ref|XP_002305203.1| predicted protein [Populus trichocarpa]
gi|222848167|gb|EEE85714.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K ++ G A +SIA + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ
Sbjct: 230 KPKSAAGPAKDLQSIAAKNRRERISERLKVLQDLVPNGSK-VDLVTMLEKAISYVKFLQL 288
Query: 350 QVENLHKD 357
QV+ L D
Sbjct: 289 QVKVLATD 296
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 7/74 (9%)
Query: 281 NIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLA 340
N+P +S +KR + +++E+ RR RI+ K+K LQ+L+PN +K T + MLD A
Sbjct: 186 NLPRNS------SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEA 238
Query: 341 VQHIKGLQNQVENL 354
++++K LQ QV+ L
Sbjct: 239 IEYLKQLQLQVQML 252
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQ 350
+ KR ++ +++ER RR RI+ K++ LQ+LVP +KQ + ML+ ++++K LQ Q
Sbjct: 214 MNKKRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQ 273
Query: 351 VENL 354
V+ +
Sbjct: 274 VQAM 277
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 353 NL 354
L
Sbjct: 158 ML 159
>gi|242066232|ref|XP_002454405.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
gi|241934236|gb|EES07381.1| hypothetical protein SORBIDRAFT_04g030230 [Sorghum bicolor]
Length = 306
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +L+ LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 217 PQSLAAKNRRERISERLRTLQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 272
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R A H +S ER RR RI+ K+K LQ LVPN K T + MLD ++++K LQ QV
Sbjct: 258 RRSRAAAIHNQS--ERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQV 314
Query: 352 E 352
+
Sbjct: 315 Q 315
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 353 NL 354
L
Sbjct: 158 ML 159
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 260 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQM 318
Query: 354 L 354
+
Sbjct: 319 M 319
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 117 NLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 167
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
P S P R R H + +ER RR RI+ KL+ LQ+L+PN K T MLD A+
Sbjct: 8 PRRSTPAPTRRSRSADFH--NFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAID 64
Query: 343 HIKGLQNQVENL 354
++K LQ Q++ L
Sbjct: 65 YLKSLQLQLQML 76
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H S ER+RR RI++K++ LQ LVPN K T + MLD ++H+K LQ QV+
Sbjct: 260 RAAAIHNES--ERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIEHLKQLQAQVQ 314
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR + +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
>gi|413938508|gb|AFW73059.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +L+ LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 204 PQSLAAKNRRERISERLRALQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 259
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H S ER+RR RI++K++ LQ LVPN K T + MLD ++H+K LQ QV+
Sbjct: 260 RAAAIHNES--ERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIEHLKQLQAQVQ 314
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K RA AT +SI R+RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ
Sbjct: 195 KSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTK-VDISTMLEEAVQYVKFLQL 253
Query: 350 QVENL 354
Q++ L
Sbjct: 254 QIKLL 258
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR + +++E+ RR RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 353 NL 354
L
Sbjct: 251 ML 252
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR+RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 150 NLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 200
>gi|225453146|ref|XP_002272414.1| PREDICTED: putative transcription factor bHLH086 [Vitis vinifera]
gi|296087164|emb|CBI33538.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 257 PQSLAAKNRRERISERLKILQDLVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATD 312
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ A+ ++K LQ Q++ L D
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
AT P+S+ R+RR RI+ +LK LQ+LVPN K S ML+ A+ ++K LQ Q++ L D
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQLQIKLLSSD 286
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KRG +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 354 L 354
+
Sbjct: 380 M 380
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KRG +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 379
Query: 354 L 354
+
Sbjct: 380 M 380
>gi|242052339|ref|XP_002455315.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
gi|241927290|gb|EES00435.1| hypothetical protein SORBIDRAFT_03g008290 [Sorghum bicolor]
Length = 290
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K +A P+S+A + RR +I+ KLK LQDLVPN K ML+ A+ ++K LQ
Sbjct: 193 KAKAAPAPTKDPQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQL 251
Query: 350 QVENLHKD 357
QV+ L D
Sbjct: 252 QVKVLAAD 259
>gi|413947161|gb|AFW79810.1| hypothetical protein ZEAMMB73_605816 [Zea mays]
Length = 325
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR +I+ KLK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 238 PQSVAAKVRREKIAEKLKVLQDLVPNGTK-VDLVTMLEKAITYVKFLQLQVKVLAAD 293
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 89 KRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQT 147
Query: 354 L 354
L
Sbjct: 148 L 148
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 274 ATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSY 333
+T L +PE+ C + + P+S+A R RR +IS +++ L+ L+P +K +
Sbjct: 364 STYSRLPGLPEEGRLCNGKPA-ATSVEPQSVAARHRRKKISERIRVLEKLIPGGNKMDT- 421
Query: 334 SDMLDLAVQHIKGLQNQVENLHKD 357
+ MLD A++++K LQ QV+ L D
Sbjct: 422 ATMLDEAIEYVKFLQLQVQILESD 445
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 353 NL 354
+
Sbjct: 373 MM 374
>gi|356499097|ref|XP_003518380.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 295
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 212 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLAAD 267
>gi|226497322|ref|NP_001142164.1| uncharacterized protein LOC100274330 [Zea mays]
gi|224031213|gb|ACN34682.1| unknown [Zea mays]
gi|413926621|gb|AFW66553.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 625
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE
Sbjct: 367 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELE 420
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR + +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 337 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 395
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 314 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 372
Query: 353 NL 354
+
Sbjct: 373 MM 374
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 89 KRNIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 147
Query: 354 L 354
L
Sbjct: 148 L 148
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 295 ARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 353
Query: 353 NL 354
+
Sbjct: 354 MM 355
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR A +++ER RR RI+ K+K LQ+L+P+ +K S MLD A++++K LQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKADKAS-MLDEAIEYLKSLQLQLQ 305
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 302 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKAS-MLDEAIEYLKTLQLQVQM 360
Query: 354 L 354
+
Sbjct: 361 M 361
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQM 331
Query: 354 L 354
+
Sbjct: 332 M 332
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKADKAS-MLDEAIEYLKTLQLQVQM 356
Query: 354 L 354
+
Sbjct: 357 M 357
>gi|125540854|gb|EAY87249.1| hypothetical protein OsI_08651 [Oryza sativa Indica Group]
Length = 299
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +L+ LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 262
>gi|41052641|dbj|BAD07489.1| bHLH protein-like [Oryza sativa Japonica Group]
gi|41052857|dbj|BAD07771.1| bHLH protein-like [Oryza sativa Japonica Group]
Length = 298
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +L+ LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 262
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 261 DSQFTMPQTSLEMATVDNLLNIPEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKL 320
+S M + +A + + PE P K R + + P+SIA R RR RIS K++ L
Sbjct: 142 NSMAAMREMIFRIAAMQPIYIDPESVKPPKRRNVK-ISKDPQSIAARHRRERISEKIRIL 200
Query: 321 QDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
Q +VP K + S MLD A+ ++K L+ Q+++L +
Sbjct: 201 QRMVPGGTKMDTAS-MLDEAIHYVKFLKTQLKSLQE 235
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KRG +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 383
Query: 354 L 354
+
Sbjct: 384 M 384
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 354 L 354
+
Sbjct: 368 M 368
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR +++ER RR RI+ K++ LQ+L+PN +K S MLD A++++K LQ QV+
Sbjct: 339 SKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKAS-MLDEAIEYLKSLQLQVQ 397
>gi|195638946|gb|ACG38941.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 410
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE G
Sbjct: 151 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELEDPADG 209
Query: 365 C 365
Sbjct: 210 A 210
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 439
Query: 354 L 354
+
Sbjct: 440 M 440
>gi|140084359|gb|ABO84933.1| Rhd6-like 4 [Physcomitrella patens]
Length = 67
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G AT P+S+ R RR +I+ +L+KLQ L+PN K MLD AV +++ L+ QV L
Sbjct: 1 GSATDPQSVHARARREKIAERLRKLQHLIPNGGK-VDIVTMLDEAVHYVQFLKRQVTLLK 59
Query: 356 KD 357
D
Sbjct: 60 SD 61
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P ++ R + P+S+A R RR RIS +++ LQ LVP K + S MLD
Sbjct: 141 PVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRLVPGGTKMDTAS-MLD 199
Query: 339 LAVQHIKGLQNQVENLH 355
A+++IK L+ QV+ LH
Sbjct: 200 EAIRYIKFLKRQVQELH 216
>gi|115448229|ref|NP_001047894.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|113537425|dbj|BAF09808.1| Os02g0710300 [Oryza sativa Japonica Group]
gi|215766533|dbj|BAG98841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +L+ LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 209 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 264
>gi|125583427|gb|EAZ24358.1| hypothetical protein OsJ_08110 [Oryza sativa Japonica Group]
Length = 282
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +L+ LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 191 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 246
>gi|10177170|dbj|BAB10359.1| unnamed protein product [Arabidopsis thaliana]
Length = 239
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 143 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLAAD 198
>gi|413926619|gb|AFW66551.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 526
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE
Sbjct: 268 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELE 321
>gi|224033315|gb|ACN35733.1| unknown [Zea mays]
gi|238015234|gb|ACR38652.1| unknown [Zea mays]
gi|413926622|gb|AFW66554.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413926623|gb|AFW66555.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 594
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE
Sbjct: 336 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELE 389
>gi|413926618|gb|AFW66550.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 440
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE G
Sbjct: 182 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELEDPADG 240
Query: 365 C 365
Sbjct: 241 A 241
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R KR A +++ER RR RI+ K++ LQ+L+PN +K T + MLD A++++K LQ Q+
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 352 ENLHKDLEHC----TCGCK 366
+ +L H +C C+
Sbjct: 71 QVPKIELLHSSHTFSCSCR 89
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 460
Query: 354 L 354
+
Sbjct: 461 M 461
>gi|414877782|tpg|DAA54913.1| TPA: hypothetical protein ZEAMMB73_144255 [Zea mays]
Length = 304
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+SI R+RR RI+ +LK LQ LVPN K S ML+ AV ++K LQ Q+ L D
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTK-VDMSTMLEEAVHYVKFLQLQIRLLSSD 278
>gi|356569373|ref|XP_003552876.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 293 AKRGCATH-------------PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDL 339
AK+ C+T P+S+A + RR RIS +LK LQ+LVPN K ML+
Sbjct: 228 AKKQCSTESKTPKHKSSPSKDPQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEK 286
Query: 340 AVQHIKGLQNQVENLHKDLEHCTCGCKP 367
A+ ++K LQ QV+ L D G KP
Sbjct: 287 AISYVKFLQLQVKVLATDEFWPVQGGKP 314
>gi|194707424|gb|ACF87796.1| unknown [Zea mays]
gi|238014816|gb|ACR38443.1| unknown [Zea mays]
gi|413926620|gb|AFW66552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 557
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE
Sbjct: 299 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELE 352
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR RI+ K+K LQ+L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 146 NLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 196
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++E+ RR+RI+ K+K LQ+L+PN K T + MLD A++++K LQ QV+
Sbjct: 134 SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIPNSSK-TDKASMLDEAIEYLKLLQLQVQ 192
Query: 353 NL 354
L
Sbjct: 193 GL 194
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER+RR RI+ ++K LQ+L+PN +K T + MLD A++++K LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KRG +++ER RR RI+ K++ LQ+L+PN +K S ML+ A++++K LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKAS-MLEEAIEYLKTLQLQVQM 324
Query: 354 L 354
+
Sbjct: 325 M 325
>gi|356537912|ref|XP_003537450.1| PREDICTED: putative transcription factor bHLH086-like [Glycine max]
Length = 339
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEH 360
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 249 PQSVAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQLQVKVLATDEFW 307
Query: 361 CTCGCKP 367
G KP
Sbjct: 308 PVQGGKP 314
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER+RR RI+ ++K LQ+L+PN +K T + MLD A++++K LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 495
Query: 354 L 354
+
Sbjct: 496 M 496
>gi|326500360|dbj|BAK06269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 558
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 304 IAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
+AER RR +++ +L KL+ LVPN+ K S + D A+ +I GLQ QV++L +LE
Sbjct: 295 VAERRRRKKLNDRLYKLRSLVPNITKMDRASILGD-AIDYIVGLQKQVKDLQDELE 349
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R H +++E+ RR+RI+ K+K LQ L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 176 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 232
Query: 355 HK----DLEHCTC 363
+L H C
Sbjct: 233 TMRNGINLHHPLC 245
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+
Sbjct: 86 KRTIDAQFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQT 144
Query: 354 L 354
L
Sbjct: 145 L 145
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 407
Query: 354 L 354
+
Sbjct: 408 M 408
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A+ ++K LQ QV+
Sbjct: 255 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRSNKSDKAS-MLDEAIDYLKSLQLQVQ- 312
Query: 354 LHKDLEHCTCGCKP 367
+ CG P
Sbjct: 313 ----MMSMGCGMVP 322
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR +++ER RR RI+ K++ LQ+L+PN +K S ML+ A++++K LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKSSMLEEAIEYLKTLQLQVQ 376
Query: 353 NL 354
+
Sbjct: 377 MM 378
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A +++ER RR RI+ K++ LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 363 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQ 421
Query: 353 NL 354
+
Sbjct: 422 MM 423
>gi|223974811|gb|ACN31593.1| unknown [Zea mays]
Length = 403
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE G
Sbjct: 145 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELEDPADG 203
Query: 365 C 365
Sbjct: 204 A 204
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 507
Query: 354 L 354
+
Sbjct: 508 M 508
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A + +ER RR RI+ K++ LQ+L+PN +K T + MLD A++++K LQ Q++
Sbjct: 592 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQLQM 650
Query: 354 L 354
+
Sbjct: 651 M 651
>gi|255583421|ref|XP_002532470.1| DNA binding protein, putative [Ricinus communis]
gi|223527828|gb|EEF29926.1| DNA binding protein, putative [Ricinus communis]
Length = 327
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K + K + P+SIA + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ
Sbjct: 224 KQKPKTSPSKDPQSIAAKNRRERISERLKILQELVPNGSK-VDLVTMLEKAISYVKFLQL 282
Query: 350 QVENLHKD 357
QV+ L D
Sbjct: 283 QVKVLATD 290
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER+RR RI+ ++K LQ+L+P +K S MLD A++++K LQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 268
Query: 354 L 354
+
Sbjct: 269 M 269
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER+RR RI+ ++K LQ+L+P +K S MLD A++++K LQ Q++
Sbjct: 210 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 268
Query: 354 L 354
+
Sbjct: 269 M 269
>gi|15240346|ref|NP_198596.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
gi|218563533|sp|Q9FJ00.2|BH086_ARATH RecName: Full=Putative transcription factor bHLH086; AltName:
Full=Basic helix-loop-helix protein 86; Short=AtbHLH86;
Short=bHLH 86; AltName: Full=Transcription factor EN
113; AltName: Full=bHLH transcription factor bHLH086
gi|332006851|gb|AED94234.1| putative transcription factor bHLH086 [Arabidopsis thaliana]
Length = 307
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLAAD 266
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R H +++E+ RR+RI+ K+K LQ L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K+K LQ+L+P +K S MLD A+ ++K LQ QV+
Sbjct: 305 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKAS-MLDEAISYLKSLQLQVQM 363
Query: 354 L 354
+
Sbjct: 364 M 364
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER RR RI+ K++ LQ+L+P +K S MLD A++++K LQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNKSDKAS-MLDEAIEYLKSLQLQVQM 415
Query: 354 L 354
+
Sbjct: 416 M 416
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 299 THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
T P+S+ R+RR +I+ +LK LQ+LVPN K S ML+ AV +IK +Q Q++ L D
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTK-VDISTMLEEAVHYIKFMQLQIKLLSSD 311
>gi|4006880|emb|CAB16798.1| putative protein [Arabidopsis thaliana]
gi|7270642|emb|CAB80359.1| putative protein [Arabidopsis thaliana]
Length = 415
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R H +++E+ RR+RI+ K+K LQ L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 197 RAAEVH--NLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 253
>gi|194690494|gb|ACF79331.1| unknown [Zea mays]
gi|223947463|gb|ACN27815.1| unknown [Zea mays]
gi|413926617|gb|AFW66549.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 409
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE G
Sbjct: 151 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELEDPADG 209
Query: 365 C 365
Sbjct: 210 A 210
>gi|195629918|gb|ACG36600.1| hypothetical protein [Zea mays]
Length = 409
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTCG 364
AER+RR +++ +L KL+ LVPN+ K + + D A+ +I GLQNQV+ L +LE G
Sbjct: 151 AERKRRKKLNERLYKLRSLVPNISKMDRAAILGD-AIDYIVGLQNQVKALQDELEDPADG 209
Query: 365 C 365
Sbjct: 210 A 210
>gi|159517157|gb|ABW97846.1| MYC [Nicotiana tabacum]
Length = 154
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 45/161 (27%)
Query: 30 LTRYVSAPGSLLRTAVDSIIGSSSPSPSPSQPSIVSSSHSHQH---HHYFAGGSTTTAGG 86
LTRY SAPG+ L TAV+S+IG++ + + SH HQH YF+ T++
Sbjct: 16 LTRYGSAPGAFLTTAVESVIGAN------NHDFNLHGSH-HQHLGPSRYFSPNMTSSNSL 68
Query: 87 DSSPVSSFTTTESTCKVNSSNAPGNNTKSGLQRSYGLNEI-----------------PQT 129
+S EST K +S LQRS G N++ P
Sbjct: 69 NS---------ESTSKAKE--------QSSLQRSIGFNDLTIGSGGGGGGGGGCGVMPAA 111
Query: 130 RAASSSLLRQRSSPAGFLSHFASETVGFSVTRETGNYNSQG 170
++++ L+R SSPA FL+ A+ G +V+ G+YNS+G
Sbjct: 112 SSSTTPLVRHSSSPARFLNQLAA-AAGDTVSMGRGSYNSKG 151
>gi|77552099|gb|ABA94896.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 246
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R + C+ +S+ + RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ Q+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 214
Query: 352 ENLHKD 357
+ L D
Sbjct: 215 KLLSSD 220
>gi|297801316|ref|XP_002868542.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314378|gb|EFH44801.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 300
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 211 PQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQVQVKVLAAD 266
>gi|195656673|gb|ACG47804.1| hypothetical protein [Zea mays]
Length = 44
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 327 MDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLEHCTC 363
MDKQT+ SDMLDLAV +IK L++QVE L D +C C
Sbjct: 1 MDKQTNTSDMLDLAVDYIKELKDQVEKLKHDQANCCC 37
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER+RR RI+ ++K LQ+L+P +K S MLD A++++K LQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 339
Query: 354 L 354
+
Sbjct: 340 M 340
>gi|13486646|dbj|BAB39884.1| unknown protein [Oryza sativa Japonica Group]
Length = 294
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S A + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 207 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 263
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 205 DGVSSGSGRQNATHSYSTASFGMDSWENGTSIVFSAPPSKRTKTLDGDIFNCLNALDSQF 264
D + SG N H+ M N T++ APP + L GDI N + +
Sbjct: 38 DPMGSGIWPSNNYHNL----LQMHQTPNTTTLSIIAPPPSSSGFL-GDILGVHNLEEDEE 92
Query: 265 ------TMPQTSLEMATVDNLLNIPEDSVPCKIRAKRG----CATHPRSIAERERRTRIS 314
M + ++A + P D P IR + + P+S+A R RR RIS
Sbjct: 93 PEEELGAMKEMMYKIAAMQ-----PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERIS 147
Query: 315 RKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
K++ LQ LVP K + S MLD A++++K L+ Q+ L
Sbjct: 148 EKIRILQRLVPGGTKMDTAS-MLDEAIRYVKFLKRQIRLL 186
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
PE P K R + + P+S+A R RR RIS +++ LQ LVP K + S MLD A+
Sbjct: 150 PESVKPPKRRNVK-ISKDPQSVAARHRRERISERMRILQRLVPGGTKMDTAS-MLDEAIH 207
Query: 343 HIKGLQNQVENLHK 356
++K L+ QV++L +
Sbjct: 208 YVKFLKKQVQSLEQ 221
>gi|218186081|gb|EEC68508.1| hypothetical protein OsI_36777 [Oryza sativa Indica Group]
gi|222616287|gb|EEE52419.1| hypothetical protein OsJ_34535 [Oryza sativa Japonica Group]
Length = 258
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R + C+ +S+ + RR RI+ +L+ LQ LVPN K S ML+ AVQ++K LQ Q+
Sbjct: 168 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 226
Query: 352 ENLHKD 357
+ L D
Sbjct: 227 KLLSSD 232
>gi|115434094|ref|NP_001041805.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|113531336|dbj|BAF03719.1| Os01g0111500 [Oryza sativa Japonica Group]
gi|215766224|dbj|BAG98452.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388931|gb|ADX60270.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 295
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S A + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 208 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 264
>gi|140084384|gb|ABO84936.1| Rhd6-like 7 [Physcomitrella patens]
Length = 67
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G AT P+S+ R RR +I+ +LK LQ LVPN +Q ML+ A+ +K L+ Q+E L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQRLVPN-GEQVDIVTMLEEAIHFVKFLEFQLELLR 59
Query: 356 KD 357
D
Sbjct: 60 SD 61
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR ++AER RR +I+ K+K LQ L+P +K T S LD A++++K LQ+Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVST-LDDAIEYVKSLQSQIQG 310
Query: 354 L 354
+
Sbjct: 311 M 311
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER+RR RI+ ++K LQ+L+P +K S MLD A++++K LQ Q++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQM 339
Query: 354 L 354
+
Sbjct: 340 M 340
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
+RA+RG AT S+AER RR +I+ ++K LQ+LVP DK T + + + V
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKV 254
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
+T P+S+A RERR RIS + K LQ LVP K + S ML+ A+ ++K L+NQ+
Sbjct: 37 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVS-MLEEAINYVKFLKNQI 90
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 283 PEDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQ 342
PE P K R + P+S+A R RR RIS ++K LQ LVP K + S MLD A+
Sbjct: 123 PESIKPPK-RRNVKISKDPQSVAARHRRERISERIKILQRLVPGGTKMDTAS-MLDEAIH 180
Query: 343 HIKGLQNQVENLHK 356
++K L+ QV+ L +
Sbjct: 181 YVKFLKKQVQTLEQ 194
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 299 THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
+ P+++A R+RR RIS +L+ LQ LVP K + S MLD A +++ LQ+QV L
Sbjct: 322 SDPQTVAARQRRERISERLRVLQKLVPGGAKMDTAS-MLDEAASYLRFLQSQVRELQ 377
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + MLD A++++K LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 217
Query: 354 L 354
+
Sbjct: 218 M 218
>gi|140084346|gb|ABO84932.1| Rhd6-like 3 [Physcomitrella patens]
Length = 67
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 296 GCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLH 355
G AT P+S+ R RR +I+ +LK LQ LVPN K MLD A+ +++ LQ QV L
Sbjct: 1 GSATDPQSVYARHRREKINERLKTLQHLVPNGAK-VDIVTMLDEAIHYVQFLQLQVTLLK 59
Query: 356 KD 357
D
Sbjct: 60 SD 61
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R A H +S ER+RR +I++++K LQ LVPN K T + MLD ++++K LQ QV+ +
Sbjct: 283 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMM 339
Query: 355 HK 356
+
Sbjct: 340 SR 341
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 299 THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
T P+S+ R+RR RI+ +LK LQ+L+PN K S ML+ AV ++K LQ Q++ L D
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSD 297
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 29/97 (29%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVP------------------------- 325
+RA+RG AT S+AER RR +IS ++K LQDLVP
Sbjct: 278 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTHAYFNF 337
Query: 326 ----NMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
++ K T + MLD + +++ LQ QVE DL
Sbjct: 338 QRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDL 374
>gi|218187376|gb|EEC69803.1| hypothetical protein OsI_00101 [Oryza sativa Indica Group]
Length = 288
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S A + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 201 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 257
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 299 THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
T P+S+ R+RR RI+ +LK LQ+L+PN K S ML+ AV ++K LQ Q++ L D
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSD 297
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 299 THPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
T P+S+ R+RR RI+ +LK LQ+L+PN K S ML+ AV ++K LQ Q++ L D
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTK-VDISTMLEEAVHYVKFLQLQIKLLSSD 297
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H +S ER+RR +I++++K LQ LVPN +K T + MLD ++++K LQ QV+
Sbjct: 293 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H +S ER+RR +I++++K LQ LVPN +K T + MLD ++++K LQ QV+
Sbjct: 293 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQVQ 347
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R K H +S ER RR +I++++K+LQ LVPN K T + MLD +Q++K LQ QV
Sbjct: 231 RIKANSVVHKQS--ERRRRDKINQRMKELQKLVPNSSK-TDKASMLDEVIQYMKQLQAQV 287
Query: 352 ENLH 355
+ ++
Sbjct: 288 QMMN 291
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +++ER RR RI+ K++ LQ+L+P+ +K T + +LD A++++K LQ QV
Sbjct: 217 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 273
Query: 352 E 352
+
Sbjct: 274 Q 274
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAV 341
+RA+RG AT S+AER RR +I+ ++K LQ+LVP DK T + + + V
Sbjct: 204 VRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKV 254
>gi|168029799|ref|XP_001767412.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681308|gb|EDQ67736.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
K R + G AT P+SIA R RR + + +++ LQ LVPN ++ + ML ++++ LQ+
Sbjct: 674 KQRRRHGTATDPQSIAARTRREKFTDRIRILQSLVPNGERLDTVH-MLSQTFEYVRFLQH 732
Query: 350 QVENLHKD 357
+V +L+ +
Sbjct: 733 KVWDLYNN 740
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 153 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 211
Query: 350 QVENL 354
QV+ L
Sbjct: 212 QVKVL 216
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R A H +S ER+RR +I++++K LQ LVPN K T + MLD ++++K LQ QV+ +
Sbjct: 270 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVQMM 326
Query: 355 HK 356
++
Sbjct: 327 NR 328
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +++ER RR RI+ K++ LQ+L+P+ +K T + +LD A++++K LQ QV
Sbjct: 228 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 284
Query: 352 E 352
+
Sbjct: 285 Q 285
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
P+S+A R RR RIS+K++ LQ LVP K + S MLD AV ++K L+ QV+ L +
Sbjct: 116 PQSVAARHRRERISQKIRILQRLVPGGTKMDTAS-MLDEAVHYVKFLKRQVQTLEQ 170
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 125 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 183
Query: 339 LAVQHIKGLQNQVENLH 355
A++++K L+ Q+ L
Sbjct: 184 EAIRYVKFLKRQIRLLQ 200
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +++ER RR RI+ K++ LQ+L+P+ +K T + +LD A++++K LQ QV
Sbjct: 317 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 373
Query: 352 E 352
+
Sbjct: 374 Q 374
>gi|297838323|ref|XP_002887043.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332884|gb|EFH63302.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 296
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 203 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATD 258
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +++ER RR RI+ K++ LQ+LVP+ +K T + +LD A++++K LQ QV
Sbjct: 245 RRTRAAEVH--NMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQV 301
Query: 352 E 352
+
Sbjct: 302 Q 302
>gi|449461799|ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
gi|449532778|ref|XP_004173357.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
Length = 195
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHK 356
+T P+S+A RERR RIS + K LQ LVP K + S MLD A+ ++K L+ Q+ LH+
Sbjct: 48 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVS-MLDEAIHYVKFLKTQIW-LHQ 105
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +++ER RR RI+ K++ LQ+L+P+ +K T + +LD A++++K LQ QV
Sbjct: 333 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQV 389
Query: 352 E 352
+
Sbjct: 390 Q 390
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 136 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 194
Query: 350 QVENL 354
QV+ L
Sbjct: 195 QVKVL 199
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 350 QVENL 354
QV+ L
Sbjct: 188 QVKVL 192
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 119 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 177
Query: 350 QVENL 354
QV+ L
Sbjct: 178 QVKVL 182
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+R A +++ER RR RI+ K++ LQ+L+P+ +K T + MLD A++++K LQ Q++
Sbjct: 31 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 88
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 180
Query: 350 QVENL 354
QV+ L
Sbjct: 181 QVKVL 185
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 126 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 184
Query: 350 QVENL 354
QV+ L
Sbjct: 185 QVKVL 189
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 129 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 187
Query: 350 QVENL 354
QV+ L
Sbjct: 188 QVKVL 192
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 113 PVDIDPAAIRKPKRKNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 171
Query: 339 LAVQHIKGLQNQVENL 354
A+ ++K L+ Q+ L
Sbjct: 172 EAIHYVKFLKRQIRLL 187
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 137 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 195
Query: 350 QVENL 354
QV+ L
Sbjct: 196 QVKIL 200
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A +++ER+RR RI+ ++K LQ+L+P +K S MLD A++++K LQ Q++
Sbjct: 290 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKAS-MLDEAIEYMKSLQLQIQV 348
Query: 354 L 354
+
Sbjct: 349 M 349
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
AKR +++ER RR RI+ K++ LQ+L+PN +K S ML+ A++++K LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKIDKAS-MLEEAIEYLKTLQLQVQ 315
Query: 353 NL 354
+
Sbjct: 316 MM 317
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S A + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 223 QPQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 279
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 134 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRL 192
Query: 350 QVENL 354
QV+ L
Sbjct: 193 QVKVL 197
>gi|357138511|ref|XP_003570835.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor ABORTED
MICROSPORES-like [Brachypodium distachyon]
Length = 582
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 304 IAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE 359
+AER+RR +++ +L KL+ LVPN+ K S + D A+ +I GLQ QV++L +LE
Sbjct: 320 MAERKRRKKLNDRLYKLRSLVPNITKMDRASILGD-AIDYIVGLQKQVKDLQDELE 374
>gi|356536103|ref|XP_003536579.1| PREDICTED: transcription factor bHLH84-like [Glycine max]
Length = 352
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 284 EDSVPCKIRAK-----RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
EDS K++ K RG AT P+S+ R RR RI+ +LK LQ+LVPN K S ML+
Sbjct: 248 EDSTSLKLKGKKSTANRGSATDPQSVYARRRRERINERLKILQNLVPNGTK-VDISTMLE 306
Query: 339 LAVQHIKGLQNQVENLHKD 357
AVQ++K LQ Q++ L D
Sbjct: 307 EAVQYVKFLQLQIKLLSSD 325
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 117 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 175
Query: 339 LAVQHIKGLQNQVENL 354
A++++K L+ Q+ L
Sbjct: 176 EAIRYVKFLKRQIRLL 191
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 288 PCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGL 347
P R R H +S ER RR RI+ K+K LQ+LVP+ +K S +LD A++++K L
Sbjct: 136 PAGKRRARAAEVHNQS--ERRRRDRINEKMKALQELVPHCNKSDKAS-ILDEAIEYLKSL 192
Query: 348 QNQVE 352
Q QV+
Sbjct: 193 QLQVQ 197
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R +T P+++A R RR RIS K++ LQ LVP K + S MLD A ++K L++QV
Sbjct: 333 RKNVKISTDPQTVAARHRRERISEKIRVLQKLVPGGSKMDTAS-MLDEAANYLKFLRSQV 391
Query: 352 ENLH 355
+ L
Sbjct: 392 KALE 395
>gi|225431517|ref|XP_002275141.1| PREDICTED: transcription factor HEC3-like [Vitis vinifera]
Length = 199
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 76 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 134
Query: 339 LAVQHIKGLQNQVENL 354
A++++K L+ Q+ L
Sbjct: 135 EAIRYVKFLKRQIRQL 150
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P ++ R + P+S+A R RR RIS +++ LQ LVP K + S MLD
Sbjct: 141 PVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRLVPGGTKMDTAS-MLD 199
Query: 339 LAVQHIKGLQNQVENL 354
A+++IK L+ QV+ L
Sbjct: 200 EAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P ++ R + P+S+A R RR RIS +++ LQ LVP K + S MLD
Sbjct: 140 PVDIDPATVKKPRRRNVRISEDPQSVAARHRRERISERVRVLQRLVPGGTKMDTAS-MLD 198
Query: 339 LAVQHIKGLQNQVENL 354
A+++IK L+ QV+ L
Sbjct: 199 EAIRYIKFLKRQVQEL 214
>gi|218184992|gb|EEC67419.1| hypothetical protein OsI_34609 [Oryza sativa Indica Group]
Length = 465
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H S ER+RR RI++K+K LQ LVPN K T + MLD + ++K LQ QV+
Sbjct: 275 RAAAIHNES--ERKRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQ 329
>gi|15219658|ref|NP_176820.1| transcription factor bHLH83 [Arabidopsis thaliana]
gi|75308842|sp|Q9C707.1|BH083_ARATH RecName: Full=Transcription factor bHLH83; AltName: Full=Basic
helix-loop-helix protein 83; Short=AtbHLH83; Short=bHLH
83; AltName: Full=Transcription factor EN 112; AltName:
Full=bHLH transcription factor bHLH083
gi|12322259|gb|AAG51154.1|AC074025_4 unknown protein [Arabidopsis thaliana]
gi|22135862|gb|AAM91513.1| unknown protein [Arabidopsis thaliana]
gi|30023790|gb|AAP13428.1| At1g66470 [Arabidopsis thaliana]
gi|332196391|gb|AEE34512.1| transcription factor bHLH83 [Arabidopsis thaliana]
Length = 298
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S+A + RR RIS +LK LQ+LVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATD 260
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 89 NLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 139
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP+++K T + MLD V ++K L+
Sbjct: 122 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEIVDYVKFLRL 180
Query: 350 QVENL 354
QV+ L
Sbjct: 181 QVKVL 185
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 266 MPQTSLEMATVDNLLNIPEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQ 321
M + +MA + P D P +R + + P+S+A R RR RIS K++ LQ
Sbjct: 94 MKEMMYKMAVMQ-----PVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQ 148
Query: 322 DLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDLE---HCTCGCKPTS 369
LVP K + S MLD A++++K L+ Q+ L +C G P S
Sbjct: 149 RLVPGGTKMDTAS-MLDEAIRYVKFLKRQIRFLQSTPPPPINCNVGAAPNS 198
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R ++ E+ RR +I KLK L+ LVP D +++ + +LD +QHIK LQ Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 13 PVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 71
Query: 339 LAVQHIKGLQNQVENLH 355
A++++K L+ Q+ L
Sbjct: 72 EAIRYVKFLKRQIRQLQ 88
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 102 PVDIDPATIRKPKRRNVRISEDPQSVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 160
Query: 339 LAVQHIKGLQNQVENL 354
A++++K L+ Q++ L
Sbjct: 161 EAIRYVKFLKRQIKLL 176
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 332 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 390
Query: 354 L 354
+
Sbjct: 391 M 391
>gi|357143431|ref|XP_003572919.1| PREDICTED: transcription factor SPATULA-like [Brachypodium
distachyon]
Length = 312
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR RI+ K+K LQ LVPN K T + MLD A++++K LQ QV+ L
Sbjct: 71 NLSEKRRRCRINEKMKALQSLVPNSSK-TDKASMLDDAIEYLKQLQLQVQML 121
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR A + +ER RR RI+ K++ LQ+L+PN +K T + MLD A+ ++K LQ Q++
Sbjct: 731 KRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQM 789
Query: 354 L 354
+
Sbjct: 790 M 790
>gi|302775426|ref|XP_002971130.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
gi|300161112|gb|EFJ27728.1| hypothetical protein SELMODRAFT_411945 [Selaginella moellendorffii]
Length = 572
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
P+SIA R+RR +IS ++++L+ LVP +K + S MLD A++ +K LQ QV+ L
Sbjct: 388 PQSIAARQRRKKISERVRELEKLVPGGNKLDTAS-MLDEAIRFVKFLQIQVQLL 440
>gi|302757065|ref|XP_002961956.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
gi|300170615|gb|EFJ37216.1| hypothetical protein SELMODRAFT_403406 [Selaginella moellendorffii]
Length = 572
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
P+SIA R+RR +IS ++++L+ LVP +K + S MLD A++ +K LQ QV+ L
Sbjct: 388 PQSIAARQRRKKISERVRELEKLVPGGNKLDTAS-MLDEAIRFVKFLQIQVQLL 440
>gi|356553623|ref|XP_003545154.1| PREDICTED: transcription factor PIF5-like [Glycine max]
Length = 562
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR A + +ER RR RI+ K++ LQ L+PN +K T + ML+ A++++K LQ Q++
Sbjct: 356 SKRNRAAEVHNQSERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQLQ 414
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 332 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 390
Query: 354 L 354
+
Sbjct: 391 M 391
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 200 FLRLQVKVL 208
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
A+R + + +ER RR +I+ KLK LQ+L+PN +K T MLD A+ ++K LQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 353 NL 354
L
Sbjct: 73 ML 74
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 200 FLRLQVKVL 208
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 200 FLRLQVKVL 208
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 293 AKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
+KR + S++E+ RR RI++K++ LQ+L+PN K S +LD A+ ++K LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKIS-ILDEAIDYLKTLQLQVQ 437
Query: 353 NL 354
+
Sbjct: 438 VM 439
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P+SIA R RR RIS K++ LQ LVP K + S MLD
Sbjct: 97 PVDIDPSTIRKPKRRNVRISDDPQSIAARLRRERISEKIRILQRLVPGGTKMDTAS-MLD 155
Query: 339 LAVQHIKGLQNQVENL 354
A++++K L+ Q+ L
Sbjct: 156 EAIRYVKFLKRQIRLL 171
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 200 FLRLQVKVL 208
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 141 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 199
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 200 FLRLQVKVL 208
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R A H +S ER+RR +I++++K LQ LVPN K T + MLD ++++K LQ QV +
Sbjct: 213 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSMM 269
Query: 355 HK 356
+
Sbjct: 270 SR 271
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
+R A +++ER RR RI+ K++ LQ+L+P+ K T + MLD A++++K LQ Q++
Sbjct: 183 RRSRAAEVHNLSERRRRDRINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQV 241
Query: 354 L 354
+
Sbjct: 242 M 242
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+++E+ RR++I+ K+K LQ L+PN +K T + MLD A++++K LQ QV+ L
Sbjct: 110 NLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQAL 160
>gi|357127136|ref|XP_003565241.1| PREDICTED: transcription factor bHLH113-like [Brachypodium
distachyon]
Length = 257
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD 357
P+S + RR RIS +LK LQDLVPN K ML+ A+ ++K LQ QV+ L D
Sbjct: 172 PQSAVAKVRRERISERLKVLQDLVPNGTK-VDMVTMLEKAITYVKFLQLQVKVLATD 227
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R A H +S ER+RR +I++++K LQ LVPN K T + MLD ++++K LQ QV +
Sbjct: 213 RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSMM 269
Query: 355 HK 356
+
Sbjct: 270 SR 271
>gi|356501423|ref|XP_003519524.1| PREDICTED: transcription factor PIF4-like [Glycine max]
Length = 562
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +S ER RR RI+ K++ LQ L+PN +K T + ML+ A++++K LQ Q+
Sbjct: 357 RRNRAAEVHNQS--ERRRRDRINEKMRTLQQLIPNSNK-TDKASMLEEAIEYLKSLQFQL 413
Query: 352 E 352
+
Sbjct: 414 Q 414
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 291 IRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQ 348
+RA+RG AT S+AER RR +I+ KLK LQ++VP K + MLD + + L+
Sbjct: 155 VRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEIINYFLSLK 212
>gi|9294680|dbj|BAB03046.1| unnamed protein product [Arabidopsis thaliana]
Length = 402
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R +T P+++A R+RR RIS K++ LQ LVP K + S MLD A ++K L+ QV
Sbjct: 299 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTAS-MLDEAANYLKFLRAQV 357
Query: 352 ---ENLHKDLEH 360
ENL L+
Sbjct: 358 KALENLRPKLDQ 369
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 282 IPEDSVP-CKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDK 329
+ D +P +RA+RG AT S+AER RR +I+ ++K LQ+LVP DK
Sbjct: 175 VESDKLPYVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDK 223
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P IR + + P S+A R RR RIS K++ LQ LVP K + S MLD
Sbjct: 81 PVDIDPATIRRPKRRNVRISDDPASVAARHRRERISEKIRILQRLVPGGTKMDTAS-MLD 139
Query: 339 LAVQHIKGLQNQVENL 354
A++++K L+ Q+ L
Sbjct: 140 EAIRYVKFLKRQIRLL 155
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Query: 286 SVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIK 345
S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K
Sbjct: 78 SIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVK 136
Query: 346 GLQNQVENL 354
L+ QV+ L
Sbjct: 137 FLRLQVKVL 145
>gi|297830832|ref|XP_002883298.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297329138|gb|EFH59557.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R +T P+++A R+RR RIS K++ LQ LVP K + S MLD A ++K L+ QV
Sbjct: 272 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTAS-MLDEAANYLKFLRAQV 330
Query: 352 ---ENLHKDLEH 360
ENL L+
Sbjct: 331 KALENLRPKLDQ 342
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R +T P+++A R RR RI+ K++ LQ LVP K + S MLD A ++K L++QV
Sbjct: 335 RKNVKISTDPQTVAARHRRERINEKIRVLQKLVPGGSKMDTAS-MLDEAANYLKFLRSQV 393
Query: 352 ---ENLHKDLEHCTCGCKPTS 369
E+L ++ C PTS
Sbjct: 394 KALESLGNKVD--AMNCPPTS 412
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 211 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 269
Query: 354 L 354
+
Sbjct: 270 M 270
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H + +ER RR +I+ KLK LQ+L+PN +K T MLD A+ ++K LQ Q+
Sbjct: 15 RRSRSAEFH--NFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQL 71
Query: 352 ENL 354
+ L
Sbjct: 72 QML 74
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 307 RERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+ RR RIS +++ LQ LVP DK T + +LD + +++ LQNQVE L
Sbjct: 77 KVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFL 124
>gi|224091579|ref|XP_002334947.1| predicted protein [Populus trichocarpa]
gi|222875273|gb|EEF12404.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 297 CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
+T P+S+A RERR RIS + K LQ LVP K + S ML+ A+ ++K L+ QV
Sbjct: 37 LSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVS-MLEEAINYVKFLKTQV 90
>gi|15232534|ref|NP_188770.1| transcription factor bHLH87 [Arabidopsis thaliana]
gi|75303373|sp|Q8S3D2.1|BH087_ARATH RecName: Full=Transcription factor bHLH87; AltName: Full=Basic
helix-loop-helix protein 87; Short=AtbHLH87; Short=bHLH
87; AltName: Full=Transcription factor EN 121; AltName:
Full=bHLH transcription factor bHLH087
gi|20127095|gb|AAM10960.1|AF488617_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|56382001|gb|AAV85719.1| At3g21330 [Arabidopsis thaliana]
gi|332642972|gb|AEE76493.1| transcription factor bHLH87 [Arabidopsis thaliana]
Length = 373
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R +T P+++A R+RR RIS K++ LQ LVP K + S MLD A ++K L+ QV
Sbjct: 270 RKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTAS-MLDEAANYLKFLRAQV 328
Query: 352 ---ENLHKDLEH 360
ENL L+
Sbjct: 329 KALENLRPKLDQ 340
>gi|326518931|dbj|BAJ92626.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H S ER+RR RI++K++ LQ LVPN K T + MLD + H+K LQ V+
Sbjct: 262 RAAAIHNES--ERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIDHLKQLQATVQ 316
>gi|326502778|dbj|BAJ99017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 464
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
R A H S ER+RR RI++K++ LQ LVPN K T + MLD + H+K LQ V+
Sbjct: 262 RAAAIHNES--ERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIDHLKQLQATVQ 316
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
P+++A R RR RIS K++ LQ LVP K + S MLD A+ ++K L++QV+ +
Sbjct: 293 PQTVAARHRRERISTKIRILQRLVPGGTKMDTAS-MLDEAIHYVKYLKSQVQAM 345
>gi|302785816|ref|XP_002974679.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
gi|300157574|gb|EFJ24199.1| hypothetical protein SELMODRAFT_415047 [Selaginella moellendorffii]
Length = 520
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 301 PRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
P+++A R RR RIS K++ LQ LVP K + S MLD A+ ++K L++QV+ +
Sbjct: 294 PQTVAARHRRERISTKIRILQRLVPGGTKMDTAS-MLDEAIHYVKYLKSQVQAM 346
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K L+
Sbjct: 147 RVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRL 205
Query: 350 QVENL 354
QV+ L
Sbjct: 206 QVKVL 210
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+ +ER RR RI+ KLK LQ+L+PN K T MLD A+ ++K LQ Q++ L
Sbjct: 26 NFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQML 76
>gi|242045924|ref|XP_002460833.1| hypothetical protein SORBIDRAFT_02g035870 [Sorghum bicolor]
gi|241924210|gb|EER97354.1| hypothetical protein SORBIDRAFT_02g035870 [Sorghum bicolor]
Length = 221
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 305 AERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKDL 358
AER+RR +++R + +L+ +VPN+ K + S + D A+ HIK LQNQV L + L
Sbjct: 57 AERKRRGKLNRNILELRSVVPNITKMSKESTLSD-AIDHIKKLQNQVLELQRQL 109
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR +++ER RR RI+ K++ LQ+L+PN +K + ML+ A++++K LQ QV+
Sbjct: 116 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLEEAIEYLKTLQLQVQM 174
Query: 354 L 354
+
Sbjct: 175 M 175
>gi|413921522|gb|AFW61454.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 283 PEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLD 338
P D P ++ R + P+S+ R RR RIS +++ LQ LVP K + S MLD
Sbjct: 141 PVDIDPATVKKPRRRNVRISEDPQSVVARHRRERISERVRVLQRLVPGGTKMDTAS-MLD 199
Query: 339 LAVQHIKGLQNQVENL 354
A+++IK L+ QV+ L
Sbjct: 200 EAIRYIKFLKRQVQEL 215
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 294 KRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVEN 353
KR + S++E+ RR RI++K++ LQ+L+PN K S +LD A+ ++K LQ QV+
Sbjct: 11 KRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVDKIS-ILDEAIDYLKTLQLQVQV 69
Query: 354 L 354
+
Sbjct: 70 M 70
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%), Gaps = 3/61 (4%)
Query: 292 RAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
R R H +++ER RR RI+ K++ LQ+L+P+ +K T + +LD ++++K LQ QV
Sbjct: 227 RRTRAAEVH--NLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQV 283
Query: 352 E 352
+
Sbjct: 284 Q 284
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 266 MPQTSLEMATVDNLLNIPEDSVPCKIRAKRG----CATHPRSIAERERRTRISRKLKKLQ 321
M + +MA + P D P +R + + P+S+A R RR RIS K++ LQ
Sbjct: 85 MKEMMYKMAVMQ-----PVDIDPASVRKPKRRNVRISDDPQSVAARHRRERISEKIRILQ 139
Query: 322 DLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENLHKD---LEHCTCGCKPTS 369
LVP K + S MLD A+ ++K L+ Q+ L L +CT G P S
Sbjct: 140 RLVPGGTKMDTAS-MLDEAILYVKFLKRQIRLLQSTSSPLINCT-GAAPNS 188
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 284 EDSVPCKIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQH 343
+ S+ ++RA+RG AT P SIAER RR RI+ +++ LQ+LVP + K T + M+D V +
Sbjct: 143 QSSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDY 201
Query: 344 IKGLQNQVENL 354
+K L+ QV+ L
Sbjct: 202 VKFLRLQVKVL 212
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 295 RGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
R A H +S ER+RR +I++++K LQ LVPN K T + MLD ++++K LQ QV +
Sbjct: 215 RAAAIHNQS--ERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQVSMM 271
Query: 355 HK 356
+
Sbjct: 272 SR 273
>gi|414877869|tpg|DAA55000.1| TPA: putative clathrin heavy chain family protein [Zea mays]
Length = 898
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 300 HPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV 351
P+SI R+RR RI+ +LK LQ LVPN K S ML+ AV ++K LQ Q+
Sbjct: 222 EPQSIYARKRRERINERLKVLQSLVPNGTK-VDMSTMLEEAVHYVKFLQLQI 272
>gi|357151466|ref|XP_003575800.1| PREDICTED: putative transcription factor bHLH086-like [Brachypodium
distachyon]
Length = 256
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 296 GC---ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVE 352
GC + + +S+ ++RR RI+ KL+ LQ L+PN K S ML+ AVQ++K LQ Q++
Sbjct: 165 GCKRPSKNMQSLYAKKRRERINEKLRVLQQLIPNGTK-VDISTMLEEAVQYVKFLQLQIK 223
Query: 353 NLHKD 357
L D
Sbjct: 224 VLSSD 228
>gi|440577342|emb|CCI55348.1| PH01B019A14.17 [Phyllostachys edulis]
Length = 184
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 303 SIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQVENL 354
+ +ER RR RI+ KLK LQ+L+PN K T MLD A+ ++K LQ Q++ L
Sbjct: 23 NFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQIQLQML 73
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 298 ATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQNQV---ENL 354
+T P+++A R+RR RIS +++ LQ +VP K + S MLD A ++K L++QV ENL
Sbjct: 205 STDPQTVAARQRRERISDRIRVLQGMVPGGSKMDTAS-MLDEAANYLKFLRSQVKALENL 263
Query: 355 HKDLEHCTC 363
L+ C
Sbjct: 264 GHKLDSVNC 272
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K L+
Sbjct: 143 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 201
Query: 350 QVENL 354
QV+ L
Sbjct: 202 QVKVL 206
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 290 KIRAKRGCATHPRSIAERERRTRISRKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQN 349
++RA+RG AT P SIAER RR RI+ +++ LQ+LVP ++K T + M+D V ++K L+
Sbjct: 138 RVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRL 196
Query: 350 QVENL 354
QV+ L
Sbjct: 197 QVKVL 201
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.124 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,829,009,670
Number of Sequences: 23463169
Number of extensions: 246900979
Number of successful extensions: 1085712
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 4423
Number of HSP's that attempted gapping in prelim test: 1008881
Number of HSP's gapped (non-prelim): 34844
length of query: 369
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 225
effective length of database: 8,980,499,031
effective search space: 2020612281975
effective search space used: 2020612281975
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 77 (34.3 bits)