Query 038559
Match_columns 137
No_of_seqs 176 out of 1075
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 21:22:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038559.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038559hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a9na_ c.10.2.4 (A:) Spliceso 98.3 4.1E-07 3E-11 61.0 5.0 84 13-102 38-123 (162)
2 d2ifga3 c.10.2.7 (A:36-191) Hi 98.3 1.6E-06 1.1E-10 57.7 7.4 91 9-102 24-114 (156)
3 d1dcea3 c.10.2.2 (A:444-567) R 98.2 1.3E-06 9.6E-11 55.9 6.5 88 8-102 12-101 (124)
4 d1ogqa_ c.10.2.8 (A:) Polygala 98.1 2.1E-06 1.6E-10 62.2 6.3 90 10-102 70-160 (313)
5 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.0 1.4E-05 1E-09 54.2 8.2 89 10-102 48-137 (192)
6 d1h6ua2 c.10.2.1 (A:36-262) In 98.0 1.2E-05 9.1E-10 55.6 7.9 58 41-102 149-206 (227)
7 d1p9ag_ c.10.2.7 (G:) von Will 97.9 1.5E-05 1.1E-09 56.6 7.7 61 41-102 146-206 (266)
8 d1h6ta2 c.10.2.1 (A:31-240) In 97.9 2.2E-05 1.6E-09 53.9 8.1 19 8-26 104-122 (210)
9 d2omxa2 c.10.2.1 (A:37-235) In 97.9 2.2E-05 1.6E-09 53.5 7.9 62 9-77 77-138 (199)
10 d1p9ag_ c.10.2.7 (G:) von Will 97.9 5.8E-05 4.2E-09 53.4 9.8 80 17-102 32-111 (266)
11 d2omxa2 c.10.2.1 (A:37-235) In 97.9 2.4E-05 1.7E-09 53.3 7.4 86 8-102 54-139 (199)
12 d2omza2 c.10.2.1 (A:33-416) In 97.8 2.3E-05 1.7E-09 57.3 7.6 84 10-102 279-362 (384)
13 d1xkua_ c.10.2.7 (A:) Decorin 97.8 1.7E-05 1.3E-09 56.9 6.7 37 65-102 217-253 (305)
14 d1ozna_ c.10.2.7 (A:) Reticulo 97.8 3.8E-05 2.8E-09 54.7 7.2 88 10-101 147-235 (284)
15 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.7 6.2E-05 4.5E-09 50.8 7.8 83 16-102 29-113 (192)
16 d1m9la_ c.10.3.1 (A:) Outer ar 97.7 4.5E-07 3.3E-11 62.7 -3.5 37 65-102 113-151 (198)
17 d1a9na_ c.10.2.4 (A:) Spliceso 97.7 2.5E-05 1.8E-09 51.9 5.4 86 10-102 12-98 (162)
18 d2astb2 c.10.1.3 (B:2136-2419) 97.7 3.4E-06 2.4E-10 60.9 0.7 37 66-102 174-211 (284)
19 d1h6ua2 c.10.2.1 (A:36-262) In 97.6 0.00015 1.1E-08 49.8 8.0 55 41-99 171-225 (227)
20 d1xkua_ c.10.2.7 (A:) Decorin 97.6 0.00012 9.1E-09 52.3 7.6 88 10-102 189-283 (305)
21 d1h6ta2 c.10.2.1 (A:31-240) In 97.6 0.00013 9.3E-09 50.0 7.3 88 8-102 82-189 (210)
22 d2astb2 c.10.1.3 (B:2136-2419) 97.6 8.5E-06 6.2E-10 58.7 1.2 36 66-101 120-158 (284)
23 d2omza2 c.10.2.1 (A:33-416) In 97.5 0.00023 1.7E-08 51.8 8.7 35 65-101 305-339 (384)
24 d1ozna_ c.10.2.7 (A:) Reticulo 97.5 0.00018 1.3E-08 51.0 7.8 94 8-102 97-212 (284)
25 d1xwdc1 c.10.2.7 (C:18-259) Fo 97.4 0.0002 1.5E-08 49.3 7.1 82 16-102 29-114 (242)
26 d1dcea3 c.10.2.2 (A:444-567) R 97.3 0.00021 1.5E-08 45.2 5.8 76 19-102 1-76 (124)
27 d1jl5a_ c.10.2.6 (A:) Leucine 97.3 0.00015 1.1E-08 51.9 5.2 54 41-102 282-335 (353)
28 d1m9la_ c.10.3.1 (A:) Outer ar 97.0 6.8E-06 5E-10 56.5 -4.3 84 11-102 43-126 (198)
29 d1ogqa_ c.10.2.8 (A:) Polygala 97.0 0.00063 4.6E-08 48.6 6.2 88 10-100 95-183 (313)
30 d2ifga3 c.10.2.7 (A:36-191) Hi 96.4 0.0027 2E-07 41.3 5.3 69 4-76 44-112 (156)
31 d1jl5a_ c.10.2.6 (A:) Leucine 96.4 0.004 2.9E-07 44.1 6.7 75 15-102 57-131 (353)
32 d1xwdc1 c.10.2.7 (C:18-259) Fo 96.3 0.0066 4.8E-07 41.3 7.3 66 10-77 47-113 (242)
33 d1koha1 c.10.2.3 (A:201-362) m 94.5 0.0027 2E-07 41.5 -0.3 61 41-102 63-126 (162)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 92.4 0.011 7.7E-07 43.1 -0.1 91 10-102 21-123 (460)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 87.3 0.072 5.3E-06 37.9 0.8 14 65-78 241-254 (344)
36 d1pgva_ c.10.1.1 (A:) Tropomod 87.3 0.13 9.6E-06 33.1 2.0 89 12-101 11-110 (167)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 86.7 0.056 4.1E-06 39.0 -0.1 83 16-102 2-95 (460)
38 d2ca6a1 c.10.1.2 (A:2-345) Rna 80.9 0.18 1.3E-05 35.7 0.4 62 41-102 184-254 (344)
39 d1koha1 c.10.2.3 (A:201-362) m 80.6 0.11 7.8E-06 33.3 -0.8 35 66-101 64-101 (162)
40 d1io0a_ c.10.1.1 (A:) Tropomod 75.7 0.4 2.9E-05 30.3 1.0 90 12-101 13-112 (166)
No 1
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.29 E-value=4.1e-07 Score=61.01 Aligned_cols=84 Identities=21% Similarity=0.194 Sum_probs=54.7
Q ss_pred cCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccc--cccCC
Q 038559 13 QLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLE--DLQFV 90 (137)
Q Consensus 13 ~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~--gl~~l 90 (137)
..+++|++|+|++.. +..++ +...+++|++|.+.++.+..........+|+|+.|.+.++. +..++. .+..+
T Consensus 38 ~~l~~L~~L~Ls~N~-i~~l~----~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~-i~~~~~l~~l~~l 111 (162)
T d1a9na_ 38 ATLDQFDAIDFSDNE-IRKLD----GFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS-LVELGDLDPLASL 111 (162)
T ss_dssp GGTTCCSEEECCSSC-CCEEC----CCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCC-CCCGGGGGGGGGC
T ss_pred cccccCCEEECCCCC-CCccC----CcccCcchhhhhcccccccCCCccccccccccccceecccc-ccccccccccccc
Confidence 457778888887543 44441 22367888888888765443211011358888888887764 544543 56778
Q ss_pred CCCCEEEEcCCC
Q 038559 91 ATLKQLQILPLL 102 (137)
Q Consensus 91 ~sL~~L~i~~~~ 102 (137)
++|++|++.+++
T Consensus 112 ~~L~~L~l~~N~ 123 (162)
T d1a9na_ 112 KSLTYLCILRNP 123 (162)
T ss_dssp TTCCEEECCSSG
T ss_pred cccchhhcCCCc
Confidence 889999998887
No 2
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.26 E-value=1.6e-06 Score=57.68 Aligned_cols=91 Identities=20% Similarity=0.012 Sum_probs=64.3
Q ss_pred cccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCccccccccccc
Q 038559 9 ALVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQ 88 (137)
Q Consensus 9 l~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~ 88 (137)
...+..+++|+.|.|.+...++.++.+.| .++++|+.|++.+..+.......-..+++|+.|.+.+. +++.+|.++-
T Consensus 24 p~~l~~l~~l~~L~l~~n~~l~~i~~~~f--~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~ 100 (156)
T d2ifga3 24 LHHLPGAENLTELYIENQQHLQHLELRDL--RGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN-ALESLSWKTV 100 (156)
T ss_dssp TTTSCSCSCCSEEECCSCSSCCEECGGGS--CSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS-CCSCCCSTTT
T ss_pred cccccCccccCeeecCCCccccccCchhh--ccccccCcceeeccccCCcccccccccccccceeccCC-CCcccChhhh
Confidence 34567788999999975555776643333 36899999999986544221111245889999999764 5889998765
Q ss_pred CCCCCCEEEEcCCC
Q 038559 89 FVATLKQLQILPLL 102 (137)
Q Consensus 89 ~l~sL~~L~i~~~~ 102 (137)
...+|++|++.+.|
T Consensus 101 ~~~~l~~L~L~~Np 114 (156)
T d2ifga3 101 QGLSLQELVLSGNP 114 (156)
T ss_dssp CSCCCCEEECCSSC
T ss_pred ccccccccccCCCc
Confidence 56689999998765
No 3
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.24 E-value=1.3e-06 Score=55.95 Aligned_cols=88 Identities=20% Similarity=0.135 Sum_probs=65.1
Q ss_pred ccccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCccccccc--c
Q 038559 8 SALVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLL--E 85 (137)
Q Consensus 8 ~l~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp--~ 85 (137)
.++.+++|++|++|++++.. +..+++ ..+.+++|+.|.+.+...... ..-+.+|+|+.|.+.+.. +..+| .
T Consensus 12 ~l~~l~~l~~L~~L~ls~N~-l~~lp~---~~~~l~~L~~L~l~~N~i~~l--~~~~~l~~L~~L~l~~N~-i~~~~~~~ 84 (124)
T d1dcea3 12 VLCHLEQLLLVTHLDLSHNR-LRALPP---ALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCNNR-LQQSAAIQ 84 (124)
T ss_dssp SCCCGGGGTTCCEEECCSSC-CCCCCG---GGGGCTTCCEEECCSSCCCCC--GGGTTCSSCCEEECCSSC-CCSSSTTG
T ss_pred CCcccccCCCCCEEECCCCc-cCcchh---hhhhhhccccccccccccccc--CccccccccCeEECCCCc-cCCCCCch
Confidence 44568899999999998543 556632 234789999999998654432 234689999999998753 55555 3
Q ss_pred cccCCCCCCEEEEcCCC
Q 038559 86 DLQFVATLKQLQILPLL 102 (137)
Q Consensus 86 gl~~l~sL~~L~i~~~~ 102 (137)
.+..+++|+.|++.+.+
T Consensus 85 ~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 85 PLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp GGGGCTTCCEEECTTSG
T ss_pred hhcCCCCCCEEECCCCc
Confidence 57789999999998876
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.12 E-value=2.1e-06 Score=62.21 Aligned_cols=90 Identities=12% Similarity=0.025 Sum_probs=62.5
Q ss_pred ccccCCCccceeeecccccce-eccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCccccccccccc
Q 038559 10 LVIQLLPNLKTLTLWLASKAK-QLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQ 88 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~-~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~ 88 (137)
+.+++|++|++|+|.++.... .+|. ..+.+++|++|++.+..+..........+++|+.+.+..+.....+|..+.
T Consensus 70 ~~l~~L~~L~~L~Ls~~N~l~g~iP~---~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~ 146 (313)
T d1ogqa_ 70 SSLANLPYLNFLYIGGINNLVGPIPP---AIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146 (313)
T ss_dssp GGGGGCTTCSEEEEEEETTEESCCCG---GGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGG
T ss_pred hHHhcCcccccccccccccccccccc---ccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhc
Confidence 468899999999997543333 3422 234689999999988654433222235677888888877666667777788
Q ss_pred CCCCCCEEEEcCCC
Q 038559 89 FVATLKQLQILPLL 102 (137)
Q Consensus 89 ~l~sL~~L~i~~~~ 102 (137)
++++|+.+.+.++.
T Consensus 147 ~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 147 SLPNLVGITFDGNR 160 (313)
T ss_dssp GCTTCCEEECCSSC
T ss_pred cCcccceeeccccc
Confidence 88888888877653
No 5
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.00 E-value=1.4e-05 Score=54.18 Aligned_cols=89 Identities=18% Similarity=0.198 Sum_probs=57.0
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccc-ccc
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLE-DLQ 88 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~-gl~ 88 (137)
..++.+++|+.|.|.+.. +..++. .....+++|++|++.+..+.......-..+++|+.|.+.+. +++.+|. .+.
T Consensus 48 ~~f~~l~~L~~L~L~~N~-i~~~~~--~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N-~l~~i~~~~f~ 123 (192)
T d1w8aa_ 48 GLFGRLPHLVKLELKRNQ-LTGIEP--NAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN-QISCVMPGSFE 123 (192)
T ss_dssp CSGGGCTTCCEEECCSSC-CCCBCT--TTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS-CCCEECTTSST
T ss_pred cccCCCceEeeeeccccc-cccccc--cccccccccceeeeccccccccCHHHHhCCCcccccccCCc-cccccCHHHhc
Confidence 445677888888886443 333311 11235678888888875444321111246888999988765 4777766 467
Q ss_pred CCCCCCEEEEcCCC
Q 038559 89 FVATLKQLQILPLL 102 (137)
Q Consensus 89 ~l~sL~~L~i~~~~ 102 (137)
++++|++|++.+.+
T Consensus 124 ~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 124 HLNSLTSLNLASNP 137 (192)
T ss_dssp TCTTCCEEECTTCC
T ss_pred CCcccccccccccc
Confidence 88899999997755
No 6
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.99 E-value=1.2e-05 Score=55.60 Aligned_cols=58 Identities=17% Similarity=0.198 Sum_probs=26.9
Q ss_pred CcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCCEEEEcCCC
Q 038559 41 GFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 41 ~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
..++|+.|.+.++....+ ..-+.+++|+.|.+.++ +++.+|. +.++++|++|++++|.
T Consensus 149 ~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n-~l~~l~~-l~~l~~L~~L~Ls~N~ 206 (227)
T d1h6ua2 149 GLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDN-KISDISP-LASLPNLIEVHLKNNQ 206 (227)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS-CCCCCGG-GGGCTTCCEEECTTSC
T ss_pred cccccccccccccccccc--hhhcccccceecccCCC-ccCCChh-hcCCCCCCEEECcCCc
Confidence 344555555554332211 11234555555555544 3444432 4455555555555543
No 7
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.94 E-value=1.5e-05 Score=56.63 Aligned_cols=61 Identities=21% Similarity=0.026 Sum_probs=45.1
Q ss_pred CcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCCEEEEcCCC
Q 038559 41 GFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 41 ~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
.+++|+.|.+.+..+.....-.-+.+++|+.|.+.+. +++.+|.++..+++|+.|.+.+.|
T Consensus 146 ~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N-~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 146 PTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN-SLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp TCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCCCSEEECCSCC
T ss_pred ccccchhcccccccccccCccccccccccceeecccC-CCcccChhHCCCCCCCEEEecCCC
Confidence 4567777777775443221111256899999999876 488999999999999999998765
No 8
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.92 E-value=2.2e-05 Score=53.92 Aligned_cols=19 Identities=26% Similarity=0.219 Sum_probs=14.9
Q ss_pred ccccccCCCccceeeeccc
Q 038559 8 SALVIQLLPNLKTLTLWLA 26 (137)
Q Consensus 8 ~l~~L~~Lp~L~~L~L~~~ 26 (137)
.++.++.+++|+.|.+.++
T Consensus 104 ~l~~l~~l~~L~~L~l~~~ 122 (210)
T d1h6ta2 104 DLSSLKDLKKLKSLSLEHN 122 (210)
T ss_dssp CGGGGTTCTTCCEEECTTS
T ss_pred ccccccccccccccccccc
Confidence 3567888999999998754
No 9
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.91 E-value=2.2e-05 Score=53.47 Aligned_cols=62 Identities=13% Similarity=0.113 Sum_probs=30.5
Q ss_pred cccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccC
Q 038559 9 ALVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKC 77 (137)
Q Consensus 9 l~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c 77 (137)
++.++++++|++|.+.++. ...+ ...+.+++|+.|.+.+...... .....|++|+.|.+.++
T Consensus 77 ~~~l~~l~~L~~L~l~~n~-~~~~----~~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n 138 (199)
T d2omxa2 77 ITPLKNLTKLVDILMNNNQ-IADI----TPLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSN 138 (199)
T ss_dssp CGGGTTCTTCCEEECCSSC-CCCC----GGGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSS
T ss_pred cccccCCcccccccccccc-cccc----cccccccccccccccccccccc--cccchhhhhHHhhhhhh
Confidence 3457788888888887443 2222 1122455566655554322211 11233455555555443
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.86 E-value=5.8e-05 Score=53.40 Aligned_cols=80 Identities=20% Similarity=0.114 Sum_probs=44.9
Q ss_pred ccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCCEE
Q 038559 17 NLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLKQL 96 (137)
Q Consensus 17 ~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L 96 (137)
+|++|+|.+.. +..++...+ ..+++|++|++.+..+... . ..+.+++|+.|.+.++ ++...|..+.++++|+.|
T Consensus 32 ~l~~L~Ls~N~-i~~l~~~~f--~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~Ls~N-~l~~~~~~~~~l~~L~~L 105 (266)
T d1p9ag_ 32 DTTILHLSENL-LYTFSLATL--MPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLDLSHN-QLQSLPLLGQTLPALTVL 105 (266)
T ss_dssp TCCEEECTTSC-CSEEEGGGG--TTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEECCSS-CCSSCCCCTTTCTTCCEE
T ss_pred CCCEEECcCCc-CCCcCHHHh--hcccccccccccccccccc-c-cccccccccccccccc-cccccccccccccccccc
Confidence 57777776432 444422122 2566777777776544322 1 2245777777777655 355555556666666666
Q ss_pred EEcCCC
Q 038559 97 QILPLL 102 (137)
Q Consensus 97 ~i~~~~ 102 (137)
+++++.
T Consensus 106 ~l~~~~ 111 (266)
T d1p9ag_ 106 DVSFNR 111 (266)
T ss_dssp ECCSSC
T ss_pred cccccc
Confidence 665543
No 11
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.86 E-value=2.4e-05 Score=53.30 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=54.9
Q ss_pred ccccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccc
Q 038559 8 SALVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDL 87 (137)
Q Consensus 8 ~l~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl 87 (137)
+++.++.|++|++|+++++. +..+ .+.+.+++|+.|.+.+...... ...+.+++|+.|.+..|.... + .++
T Consensus 54 ~l~~l~~l~nL~~L~Ls~N~-l~~~----~~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~~~~~~-~-~~~ 124 (199)
T d2omxa2 54 SIDGVEYLNNLTQINFSNNQ-LTDI----TPLKNLTKLVDILMNNNQIADI--TPLANLTNLTGLTLFNNQITD-I-DPL 124 (199)
T ss_dssp CCTTGGGCTTCCEEECCSSC-CCCC----GGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGG
T ss_pred CccccccCCCcCcCcccccc-ccCc----ccccCCcccccccccccccccc--ccccccccccccccccccccc-c-ccc
Confidence 34556778888888887653 4443 1234778888888877443321 123578888888887665332 2 246
Q ss_pred cCCCCCCEEEEcCCC
Q 038559 88 QFVATLKQLQILPLL 102 (137)
Q Consensus 88 ~~l~sL~~L~i~~~~ 102 (137)
.++++|+.|+++++.
T Consensus 125 ~~l~~L~~L~l~~n~ 139 (199)
T d2omxa2 125 KNLTNLNRLELSSNT 139 (199)
T ss_dssp TTCTTCSEEECCSSC
T ss_pred chhhhhHHhhhhhhh
Confidence 677888888887664
No 12
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.85 E-value=2.3e-05 Score=57.31 Aligned_cols=84 Identities=15% Similarity=0.158 Sum_probs=46.4
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccC
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQF 89 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~ 89 (137)
+.+..++.++.+.+..+. +..+ .....+++++.|++.+..+... .....+|+|+.|.+.+| +++.+| ++.+
T Consensus 279 ~~~~~~~~l~~l~~~~n~-l~~~----~~~~~~~~l~~L~ls~n~l~~l--~~l~~l~~L~~L~L~~n-~l~~l~-~l~~ 349 (384)
T d2omza2 279 SPLAGLTALTNLELNENQ-LEDI----SPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFANN-KVSDVS-SLAN 349 (384)
T ss_dssp GGGTTCTTCSEEECCSSC-CSCC----GGGGGCTTCSEEECCSSCCSCC--GGGGGCTTCCEEECCSS-CCCCCG-GGGG
T ss_pred Cccccccccccccccccc-cccc----cccchhcccCeEECCCCCCCCC--cccccCCCCCEEECCCC-CCCCCh-hHcC
Confidence 345566666666665332 2222 1123556677777766443322 12245777777777666 455555 4666
Q ss_pred CCCCCEEEEcCCC
Q 038559 90 VATLKQLQILPLL 102 (137)
Q Consensus 90 l~sL~~L~i~~~~ 102 (137)
+++|++|+++++.
T Consensus 350 l~~L~~L~l~~N~ 362 (384)
T d2omza2 350 LTNINWLSAGHNQ 362 (384)
T ss_dssp CTTCCEEECCSSC
T ss_pred CCCCCEEECCCCc
Confidence 7777777776654
No 13
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.84 E-value=1.7e-05 Score=56.93 Aligned_cols=37 Identities=19% Similarity=0.125 Sum_probs=30.4
Q ss_pred cCCccceEeeccCcccccccccccCCCCCCEEEEcCCC
Q 038559 65 ALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 65 ~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
.+++|+.|.+.++ +++.+|.++.++++|+.|+++++.
T Consensus 217 ~l~~L~~L~L~~N-~L~~lp~~l~~l~~L~~L~Ls~N~ 253 (305)
T d1xkua_ 217 NTPHLRELHLNNN-KLVKVPGGLADHKYIQVVYLHNNN 253 (305)
T ss_dssp GSTTCCEEECCSS-CCSSCCTTTTTCSSCCEEECCSSC
T ss_pred ccccceeeecccc-cccccccccccccCCCEEECCCCc
Confidence 4688888888887 578888888888899999888765
No 14
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=3.8e-05 Score=54.73 Aligned_cols=88 Identities=22% Similarity=0.146 Sum_probs=50.5
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCccccccc-cccc
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLL-EDLQ 88 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp-~gl~ 88 (137)
..+..+++|++|.|.+.. +..++.+.+ .+.++|+.+.+.+..........-+.+++|+.|.+.++. +..+| ..+.
T Consensus 147 ~~f~~~~~L~~L~l~~N~-l~~l~~~~f--~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~-i~~~~~~~~~ 222 (284)
T d1ozna_ 147 DTFRDLGNLTHLFLHGNR-ISSVPERAF--RGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN-LSALPTEALA 222 (284)
T ss_dssp TTTTTCTTCCEEECCSSC-CCEECTTTT--TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC-CSCCCHHHHT
T ss_pred hHhccccchhhcccccCc-ccccchhhh--ccccccchhhhhhccccccChhHhhhhhhcccccccccc-cccccccccc
Confidence 345566666666665442 344321122 245667777776644432211112567788888887654 44444 4677
Q ss_pred CCCCCCEEEEcCC
Q 038559 89 FVATLKQLQILPL 101 (137)
Q Consensus 89 ~l~sL~~L~i~~~ 101 (137)
.+.+|++|++.+.
T Consensus 223 ~~~~L~~L~l~~N 235 (284)
T d1ozna_ 223 PLRALQYLRLNDN 235 (284)
T ss_dssp TCTTCCEEECCSS
T ss_pred cccccCEEEecCC
Confidence 7888888888764
No 15
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.73 E-value=6.2e-05 Score=50.85 Aligned_cols=83 Identities=16% Similarity=0.067 Sum_probs=58.7
Q ss_pred Cccceeeeccccccee-ccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccc-cccCCCCC
Q 038559 16 PNLKTLTLWLASKAKQ-LEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLE-DLQFVATL 93 (137)
Q Consensus 16 p~L~~L~L~~~~~~~~-l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~-gl~~l~sL 93 (137)
+++++|.|.+.. +.. ++...| +.+++|+.|++.+.............+++|+.|.+.+. ++..+|. .+.++++|
T Consensus 29 ~~l~~L~Ls~N~-i~~~~~~~~f--~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N-~l~~l~~~~F~~l~~L 104 (192)
T d1w8aa_ 29 LHTTELLLNDNE-LGRISSDGLF--GRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN-KIKEISNKMFLGLHQL 104 (192)
T ss_dssp TTCSEEECCSCC-CCSBCCSCSG--GGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC-CCCEECSSSSTTCTTC
T ss_pred CCCCEEEeCCCC-Cccccccccc--CCCceEeeeeccccccccccccccccccccceeeeccc-cccccCHHHHhCCCcc
Confidence 479999998543 322 211122 36889999999886554332222356899999999765 5888876 47889999
Q ss_pred CEEEEcCCC
Q 038559 94 KQLQILPLL 102 (137)
Q Consensus 94 ~~L~i~~~~ 102 (137)
++|+++++.
T Consensus 105 ~~L~L~~N~ 113 (192)
T d1w8aa_ 105 KTLNLYDNQ 113 (192)
T ss_dssp CEEECCSSC
T ss_pred cccccCCcc
Confidence 999998875
No 16
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.72 E-value=4.5e-07 Score=62.66 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=26.3
Q ss_pred cCCccceEeeccCccccccc--ccccCCCCCCEEEEcCCC
Q 038559 65 ALPSLKYLQLHKCLKLRMLL--EDLQFVATLKQLQILPLL 102 (137)
Q Consensus 65 ~mp~L~~L~i~~c~~l~~lp--~gl~~l~sL~~L~i~~~~ 102 (137)
.+++|+.|.+.++ ++..++ ..+..+++|+.|++.++|
T Consensus 113 ~l~~L~~L~L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 113 KLVNLRVLYMSNN-KITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHHHSSEEEESEE-ECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred ccccccccccccc-hhccccccccccCCCccceeecCCCc
Confidence 4677777777654 244444 256788999999998876
No 17
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.72 E-value=2.5e-05 Score=51.88 Aligned_cols=86 Identities=14% Similarity=0.012 Sum_probs=63.2
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccc-c
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDL-Q 88 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl-~ 88 (137)
+.+....+|+.|+|.++. +..++ .-...+++|+.|++++..+... ..-..+|+|+.|.+.+|. +..+|.++ .
T Consensus 12 ~~~~n~~~lr~L~L~~n~-I~~i~---~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~-i~~l~~~~~~ 84 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYK-IPVIE---NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNR-ICRIGEGLDQ 84 (162)
T ss_dssp CEEECTTSCEEEECTTSC-CCSCC---CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSC-CCEECSCHHH
T ss_pred HhccCcCcCcEEECCCCC-CCccC---ccccccccCCEEECCCCCCCcc--CCcccCcchhhhhccccc-ccCCCccccc
Confidence 446677889999998653 44441 1123689999999999655432 123679999999999875 77787754 5
Q ss_pred CCCCCCEEEEcCCC
Q 038559 89 FVATLKQLQILPLL 102 (137)
Q Consensus 89 ~l~sL~~L~i~~~~ 102 (137)
.+++|++|.+.++.
T Consensus 85 ~l~~L~~L~L~~N~ 98 (162)
T d1a9na_ 85 ALPDLTELILTNNS 98 (162)
T ss_dssp HCTTCCEEECCSCC
T ss_pred cccccccceecccc
Confidence 68999999998875
No 18
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.69 E-value=3.4e-06 Score=60.89 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=19.4
Q ss_pred CCccceEeeccCcccc-cccccccCCCCCCEEEEcCCC
Q 038559 66 LPSLKYLQLHKCLKLR-MLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 66 mp~L~~L~i~~c~~l~-~lp~gl~~l~sL~~L~i~~~~ 102 (137)
+|+|++|.+.+|+.++ ..+..+..+++|++|.+++|.
T Consensus 174 ~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~ 211 (284)
T d2astb2 174 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 211 (284)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred cccccccccccccCCCchhhhhhcccCcCCEEECCCCC
Confidence 4556666665555443 223344455556666665554
No 19
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=97.57 E-value=0.00015 Score=49.83 Aligned_cols=55 Identities=16% Similarity=0.171 Sum_probs=24.5
Q ss_pred CcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCCEEEEc
Q 038559 41 GFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQIL 99 (137)
Q Consensus 41 ~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~ 99 (137)
.+++|++|++.+..+... ..-+.+|+|+.|.+.+| +++.+|. +.++++|+.|.++
T Consensus 171 ~l~~L~~L~Ls~n~l~~l--~~l~~l~~L~~L~Ls~N-~lt~i~~-l~~l~~L~~L~ls 225 (227)
T d1h6ua2 171 NLSKLTTLKADDNKISDI--SPLASLPNLIEVHLKNN-QISDVSP-LANTSNLFIVTLT 225 (227)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECTTS-CCCBCGG-GTTCTTCCEEEEE
T ss_pred ccccceecccCCCccCCC--hhhcCCCCCCEEECcCC-cCCCCcc-cccCCCCCEEEee
Confidence 345555555554322211 11234555555555554 3444442 4455555555543
No 20
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=97.56 E-value=0.00012 Score=52.25 Aligned_cols=88 Identities=14% Similarity=0.064 Sum_probs=56.8
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCccccccccc---
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLED--- 86 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~g--- 86 (137)
..+..++++++|.+.++. +..++...+ .++++|++|++.+..+... ...-+.+++|+.|.+.++ +++.++..
T Consensus 189 ~~~~~~~~l~~L~~s~n~-l~~~~~~~~--~~l~~L~~L~L~~N~L~~l-p~~l~~l~~L~~L~Ls~N-~i~~i~~~~f~ 263 (305)
T d1xkua_ 189 ASLKGLNNLAKLGLSFNS-ISAVDNGSL--ANTPHLRELHLNNNKLVKV-PGGLADHKYIQVVYLHNN-NISAIGSNDFC 263 (305)
T ss_dssp GGGTTCTTCCEEECCSSC-CCEECTTTG--GGSTTCCEEECCSSCCSSC-CTTTTTCSSCCEEECCSS-CCCCCCTTSSS
T ss_pred hHhhcccccccccccccc-ccccccccc--cccccceeeeccccccccc-ccccccccCCCEEECCCC-ccCccChhhcc
Confidence 345555666666655332 333311111 2578999999998655432 223367999999999886 47776542
Q ss_pred ----ccCCCCCCEEEEcCCC
Q 038559 87 ----LQFVATLKQLQILPLL 102 (137)
Q Consensus 87 ----l~~l~sL~~L~i~~~~ 102 (137)
...+.+|+.|.+.+++
T Consensus 264 ~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 264 PPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp CSSCCTTSCCCSEEECCSSS
T ss_pred CcchhcccCCCCEEECCCCc
Confidence 3456889999999987
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=97.56 E-value=0.00013 Score=49.95 Aligned_cols=88 Identities=20% Similarity=0.171 Sum_probs=50.9
Q ss_pred ccccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccce-----------eee---------cCCcCC
Q 038559 8 SALVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEW-----------TEI---------EEGALP 67 (137)
Q Consensus 8 ~l~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~-----------~~~---------~~g~mp 67 (137)
+++.++.|++|++|.+.++. +..++ ....+++|+.|.+.+...... +.. ..+.++
T Consensus 82 ~l~~~~~l~~L~~L~l~~n~-i~~l~----~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~~~~~~~l~ 156 (210)
T d1h6ta2 82 DIKPLANLKNLGWLFLDENK-VKDLS----SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLT 156 (210)
T ss_dssp CCGGGTTCTTCCEEECCSSC-CCCGG----GGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCT
T ss_pred CccccccCcccccccccccc-ccccc----cccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45668899999999998653 44441 234678888888876432211 000 012355
Q ss_pred ccceEeeccCcccccccccccCCCCCCEEEEcCCC
Q 038559 68 SLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 68 ~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
+|+.+.+.++ ++..++ .+.++++|++|+++++.
T Consensus 157 ~L~~l~l~~n-~l~~i~-~l~~l~~L~~L~Ls~N~ 189 (210)
T d1h6ta2 157 KLDTLSLEDN-QISDIV-PLAGLTKLQNLYLSKNH 189 (210)
T ss_dssp TCSEEECCSS-CCCCCG-GGTTCTTCCEEECCSSC
T ss_pred cccccccccc-cccccc-cccCCCCCCEEECCCCC
Confidence 5666665554 244443 25566677777776654
No 22
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.56 E-value=8.5e-06 Score=58.69 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=15.8
Q ss_pred CCccceEeeccCcccc--cccccccC-CCCCCEEEEcCC
Q 038559 66 LPSLKYLQLHKCLKLR--MLLEDLQF-VATLKQLQILPL 101 (137)
Q Consensus 66 mp~L~~L~i~~c~~l~--~lp~gl~~-l~sL~~L~i~~~ 101 (137)
.|+|+.|.+.+|.++. .++..+.+ .++|++|.+.+|
T Consensus 120 ~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~ 158 (284)
T d2astb2 120 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 158 (284)
T ss_dssp CTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred HHhccccccccccccccccchhhhcccccccchhhhccc
Confidence 4555555555554432 12221211 245555555554
No 23
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=97.52 E-value=0.00023 Score=51.79 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=16.5
Q ss_pred cCCccceEeeccCcccccccccccCCCCCCEEEEcCC
Q 038559 65 ALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPL 101 (137)
Q Consensus 65 ~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~ 101 (137)
.+++++.|.+.++ +++.++. +.++++|++|++++|
T Consensus 305 ~~~~l~~L~ls~n-~l~~l~~-l~~l~~L~~L~L~~n 339 (384)
T d2omza2 305 NLKNLTYLTLYFN-NISDISP-VSSLTKLQRLFFANN 339 (384)
T ss_dssp GCTTCSEEECCSS-CCSCCGG-GGGCTTCCEEECCSS
T ss_pred hhcccCeEECCCC-CCCCCcc-cccCCCCCEEECCCC
Confidence 3455555555443 2333332 444555555555544
No 24
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.50 E-value=0.00018 Score=50.99 Aligned_cols=94 Identities=18% Similarity=0.093 Sum_probs=46.1
Q ss_pred ccccccCCCccceeeecccccceeccce-------------------ecCcc---CcccccEEEeccccccceeeecCCc
Q 038559 8 SALVIQLLPNLKTLTLWLASKAKQLEKE-------------------FCSVG---GFHKLEILIIAFHVLEEWTEIEEGA 65 (137)
Q Consensus 8 ~l~~L~~Lp~L~~L~L~~~~~~~~l~~~-------------------~~~~~---~f~~Lk~L~l~~~~~~~~~~~~~g~ 65 (137)
+...++.+++|++|.+..+. ...+... .+..+ .+++|+.|++.+..+.....-.-..
T Consensus 97 ~~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~ 175 (284)
T d1ozna_ 97 DPATFHGLGRLHTLHLDRCG-LQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRG 175 (284)
T ss_dssp CTTTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cchhhcccccCCEEecCCcc-cccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcc
Confidence 34467788889988887432 1111000 00011 2344555555543322111001123
Q ss_pred CCccceEeeccCcccccccccccCCCCCCEEEEcCCC
Q 038559 66 LPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 66 mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
+++|+.+.+..+.-..-.|..+.++++|++|+++++.
T Consensus 176 l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 212 (284)
T d1ozna_ 176 LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (284)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ccccchhhhhhccccccChhHhhhhhhcccccccccc
Confidence 5666666665543223335566667777777776654
No 25
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.43 E-value=0.0002 Score=49.32 Aligned_cols=82 Identities=26% Similarity=0.275 Sum_probs=56.3
Q ss_pred CccceeeecccccceeccceecCccCcccccEEEeccccccceeeecC---CcCCccceEeeccCcccccccc-cccCCC
Q 038559 16 PNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEE---GALPSLKYLQLHKCLKLRMLLE-DLQFVA 91 (137)
Q Consensus 16 p~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~---g~mp~L~~L~i~~c~~l~~lp~-gl~~l~ 91 (137)
+++++|+|.+.. +..++...| .++++|++|++.+...... ++. ..++.++.+.+..|.++..++. .+.+++
T Consensus 29 ~~l~~L~Ls~n~-i~~l~~~~f--~~l~~L~~L~ls~n~~~~~--i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~ 103 (242)
T d1xwdc1 29 RNAIELRFVLTK-LRVIQKGAF--SGFGDLEKIEISQNDVLEV--IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLP 103 (242)
T ss_dssp SCCSEEEEESCC-CCEECTTTT--TTCTTCCEEEEESCTTCCE--ECSSSEESCTTCCEEEEECCTTCCEECTTSEECCT
T ss_pred CCCCEEECcCCc-CCccChhHh--hccchhhhhhhccccccce--eeccccccccccccccccccccccccccccccccc
Confidence 379999998553 555532222 3688999999987554433 222 3477888888877777766554 567888
Q ss_pred CCCEEEEcCCC
Q 038559 92 TLKQLQILPLL 102 (137)
Q Consensus 92 sL~~L~i~~~~ 102 (137)
+|+++.+.++.
T Consensus 104 ~L~~l~l~~~~ 114 (242)
T d1xwdc1 104 NLQYLLISNTG 114 (242)
T ss_dssp TCCEEEEESCC
T ss_pred cccccccchhh
Confidence 89999887764
No 26
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.35 E-value=0.00021 Score=45.16 Aligned_cols=76 Identities=18% Similarity=0.157 Sum_probs=54.6
Q ss_pred ceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCCEEEE
Q 038559 19 KTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQI 98 (137)
Q Consensus 19 ~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i 98 (137)
+.|+|++.. +..+ ..-+.+++|++|++.+..+... ...-+.|++|+.|.+.+. .++.+| ++.++++|++|++
T Consensus 1 R~L~Ls~n~-l~~l----~~l~~l~~L~~L~ls~N~l~~l-p~~~~~l~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~l 72 (124)
T d1dcea3 1 RVLHLAHKD-LTVL----CHLEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDN-ALENVD-GVANLPRLQELLL 72 (124)
T ss_dssp SEEECTTSC-CSSC----CCGGGGTTCCEEECCSSCCCCC-CGGGGGCTTCCEEECCSS-CCCCCG-GGTTCSSCCEEEC
T ss_pred CEEEcCCCC-CCCC----cccccCCCCCEEECCCCccCcc-hhhhhhhhcccccccccc-cccccC-ccccccccCeEEC
Confidence 456676432 3333 2345789999999998655432 223467999999999875 577776 5889999999999
Q ss_pred cCCC
Q 038559 99 LPLL 102 (137)
Q Consensus 99 ~~~~ 102 (137)
.++.
T Consensus 73 ~~N~ 76 (124)
T d1dcea3 73 CNNR 76 (124)
T ss_dssp CSSC
T ss_pred CCCc
Confidence 8865
No 27
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=97.29 E-value=0.00015 Score=51.91 Aligned_cols=54 Identities=26% Similarity=0.071 Sum_probs=37.0
Q ss_pred CcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCCEEEEcCCC
Q 038559 41 GFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 41 ~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
.+++|++|++.++.+... . ..+|+|+.|.+.+| +++.+|.. +++|++|++++++
T Consensus 282 ~~~~L~~L~Ls~N~l~~l---p-~~~~~L~~L~L~~N-~L~~l~~~---~~~L~~L~L~~N~ 335 (353)
T d1jl5a_ 282 LPPSLEELNVSNNKLIEL---P-ALPPRLERLIASFN-HLAEVPEL---PQNLKQLHVEYNP 335 (353)
T ss_dssp CCTTCCEEECCSSCCSCC---C-CCCTTCCEEECCSS-CCSCCCCC---CTTCCEEECCSSC
T ss_pred cCCCCCEEECCCCccCcc---c-cccCCCCEEECCCC-cCCccccc---cCCCCEEECcCCc
Confidence 467888888887654422 1 34788888888665 47777753 4577888887775
No 28
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.02 E-value=6.8e-06 Score=56.48 Aligned_cols=84 Identities=18% Similarity=0.239 Sum_probs=59.4
Q ss_pred cccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCC
Q 038559 11 VIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFV 90 (137)
Q Consensus 11 ~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l 90 (137)
.++.|++|++|.|.++. ++.+ ..-..+++|+.|++.++.+... ......+++|+.|.+.++ +++.++ ++.++
T Consensus 43 sl~~L~~L~~L~Ls~n~-I~~i----~~l~~l~~L~~L~Ls~N~i~~i-~~~~~~~~~L~~L~l~~N-~i~~l~-~~~~l 114 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNN-IEKI----SSLSGMENLRILSLGRNLIKKI-ENLDAVADTLEELWISYN-QIASLS-GIEKL 114 (198)
T ss_dssp HHHHTTTCCEEECSEEE-ESCC----CCHHHHTTCCEEECCEEEECSC-SSHHHHHHHCCEEECSEE-ECCCHH-HHHHH
T ss_pred HHhcccccceeECcccC-CCCc----ccccCCccccChhhcccccccc-cccccccccccccccccc-cccccc-ccccc
Confidence 47789999999998543 4444 1234789999999998644322 111234678999999876 566664 47778
Q ss_pred CCCCEEEEcCCC
Q 038559 91 ATLKQLQILPLL 102 (137)
Q Consensus 91 ~sL~~L~i~~~~ 102 (137)
++|+.|+++++.
T Consensus 115 ~~L~~L~L~~N~ 126 (198)
T d1m9la_ 115 VNLRVLYMSNNK 126 (198)
T ss_dssp HHSSEEEESEEE
T ss_pred ccccccccccch
Confidence 999999998764
No 29
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=97.02 E-value=0.00063 Score=48.65 Aligned_cols=88 Identities=14% Similarity=0.061 Sum_probs=56.8
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccC
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQF 89 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~ 89 (137)
+.+++|++|++|+|.++. +..+. ......+++|+.+.+........+....+.++.|+.+.+.++.....+|..+..
T Consensus 95 ~~i~~L~~L~~L~Ls~N~-l~~~~--~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~ 171 (313)
T d1ogqa_ 95 PAIAKLTQLHYLYITHTN-VSGAI--PDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171 (313)
T ss_dssp GGGGGCTTCSEEEEEEEC-CEEEC--CGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGC
T ss_pred cccccccccchhhhcccc-ccccc--cccccchhhhcccccccccccccCchhhccCcccceeecccccccccccccccc
Confidence 358999999999998553 33331 111235778888888764333222223467889999988877655567877777
Q ss_pred CCCC-CEEEEcC
Q 038559 90 VATL-KQLQILP 100 (137)
Q Consensus 90 l~sL-~~L~i~~ 100 (137)
+.++ +.+.+..
T Consensus 172 l~~l~~~l~~~~ 183 (313)
T d1ogqa_ 172 FSKLFTSMTISR 183 (313)
T ss_dssp CCTTCCEEECCS
T ss_pred cccccccccccc
Confidence 7665 5555443
No 30
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.41 E-value=0.0027 Score=41.30 Aligned_cols=69 Identities=20% Similarity=0.129 Sum_probs=45.1
Q ss_pred CCCCccccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeecc
Q 038559 4 LSENSALVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHK 76 (137)
Q Consensus 4 l~~~~l~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~ 76 (137)
|+.-+...+..|++|+.|.|.+.. +..++++.| .++++|++|++.+..+... ....-..++|+.|.+.+
T Consensus 44 l~~i~~~~f~~l~~L~~L~Ls~N~-l~~i~~~~f--~~l~~L~~L~Ls~N~l~~l-~~~~~~~~~l~~L~L~~ 112 (156)
T d2ifga3 44 LQHLELRDLRGLGELRNLTIVKSG-LRFVAPDAF--HFTPRLSRLNLSFNALESL-SWKTVQGLSLQELVLSG 112 (156)
T ss_dssp CCEECGGGSCSCCCCSEEECCSSC-CCEECTTGG--GSCSCCCEEECCSSCCSCC-CSTTTCSCCCCEEECCS
T ss_pred ccccCchhhccccccCcceeeccc-cCCcccccc--cccccccceeccCCCCccc-ChhhhccccccccccCC
Confidence 333344568899999999998653 666632222 3678999999998654422 22222345788998864
No 31
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=96.40 E-value=0.004 Score=44.08 Aligned_cols=75 Identities=24% Similarity=0.238 Sum_probs=51.0
Q ss_pred CCccceeeecccccceeccceecCccCcccccEEEeccccccceeeecCCcCCccceEeeccCcccccccccccCCCCCC
Q 038559 15 LPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIEEGALPSLKYLQLHKCLKLRMLLEDLQFVATLK 94 (137)
Q Consensus 15 Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~~g~mp~L~~L~i~~c~~l~~lp~gl~~l~sL~ 94 (137)
+|+|++|.|.+. .+..+| +.+++|+.|.+.+...... . .-.++|+.|.+.++ .+..+|. +.++++|+
T Consensus 57 ~~~L~~L~Ls~N-~l~~lp------~~~~~L~~L~l~~n~l~~l---~-~lp~~L~~L~L~~n-~l~~lp~-~~~l~~L~ 123 (353)
T d1jl5a_ 57 PPHLESLVASCN-SLTELP------ELPQSLKSLLVDNNNLKAL---S-DLPPLLEYLGVSNN-QLEKLPE-LQNSSFLK 123 (353)
T ss_dssp CTTCSEEECCSS-CCSSCC------CCCTTCCEEECCSSCCSCC---C-SCCTTCCEEECCSS-CCSSCCC-CTTCTTCC
T ss_pred CCCCCEEECCCC-CCcccc------cchhhhhhhhhhhcccchh---h-hhcccccccccccc-ccccccc-hhhhccce
Confidence 468899988743 355552 2467899998887543321 1 22346999998766 4777875 56789999
Q ss_pred EEEEcCCC
Q 038559 95 QLQILPLL 102 (137)
Q Consensus 95 ~L~i~~~~ 102 (137)
+|++.++.
T Consensus 124 ~L~l~~~~ 131 (353)
T d1jl5a_ 124 IIDVDNNS 131 (353)
T ss_dssp EEECCSSC
T ss_pred eecccccc
Confidence 99987664
No 32
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.33 E-value=0.0066 Score=41.29 Aligned_cols=66 Identities=17% Similarity=0.171 Sum_probs=35.9
Q ss_pred ccccCCCccceeeecccccceeccceecCccCcccccEEEeccccccceeeec-CCcCCccceEeeccC
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCSVGGFHKLEILIIAFHVLEEWTEIE-EGALPSLKYLQLHKC 77 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~~~~~-~g~mp~L~~L~i~~c 77 (137)
..+.++++|++|+|.++.....++...+ ..+++++.+.+...+........ -..+++|+.+.+..+
T Consensus 47 ~~f~~l~~L~~L~ls~n~~~~~i~~~~f--~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 47 GAFSGFGDLEKIEISQNDVLEVIEADVF--SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNT 113 (242)
T ss_dssp TTTTTCTTCCEEEEESCTTCCEECSSSE--ESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESC
T ss_pred hHhhccchhhhhhhccccccceeecccc--ccccccccccccccccccccccccccccccccccccchh
Confidence 3578899999999985543333311111 24566677666543222221111 135777777777654
No 33
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.51 E-value=0.0027 Score=41.50 Aligned_cols=61 Identities=21% Similarity=0.128 Sum_probs=39.5
Q ss_pred CcccccEEEeccccccceeeec--CCcCCccceEeeccCcccccccc-cccCCCCCCEEEEcCCC
Q 038559 41 GFHKLEILIIAFHVLEEWTEIE--EGALPSLKYLQLHKCLKLRMLLE-DLQFVATLKQLQILPLL 102 (137)
Q Consensus 41 ~f~~Lk~L~l~~~~~~~~~~~~--~g~mp~L~~L~i~~c~~l~~lp~-gl~~l~sL~~L~i~~~~ 102 (137)
.+++|++|++++..+...-.+. .+.+|+|+.|.+.+. .++.++. ......+|++|++.+.|
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCTTST
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecCCCC
Confidence 5889999999986543221111 135899999999764 3555554 11234478889998877
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.40 E-value=0.011 Score=43.14 Aligned_cols=91 Identities=19% Similarity=0.162 Sum_probs=57.8
Q ss_pred ccccCCCccceeeecccccceeccceecC--ccCcccccEEEeccccccc--eeeecC---CcCCccceEeeccCcccc-
Q 038559 10 LVIQLLPNLKTLTLWLASKAKQLEKEFCS--VGGFHKLEILIIAFHVLEE--WTEIEE---GALPSLKYLQLHKCLKLR- 81 (137)
Q Consensus 10 ~~L~~Lp~L~~L~L~~~~~~~~l~~~~~~--~~~f~~Lk~L~l~~~~~~~--~~~~~~---g~mp~L~~L~i~~c~~l~- 81 (137)
..++.+++|+.|.|.+|. +..-+-+.+. -...++|+.|++.+..+.. +..+.. ..-++|+.|.+.+|. +.
T Consensus 21 ~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~-it~ 98 (460)
T d1z7xw1 21 ELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCC-LTG 98 (460)
T ss_dssp HHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSC-CBG
T ss_pred HHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCC-ccc
Confidence 457788999999998774 2211000000 1367899999998754321 000111 123579999999885 42
Q ss_pred ----cccccccCCCCCCEEEEcCCC
Q 038559 82 ----MLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 82 ----~lp~gl~~l~sL~~L~i~~~~ 102 (137)
.++..+...++|++|.+.++.
T Consensus 99 ~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 99 AGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp GGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred cccccccchhhcccccccccccccc
Confidence 356678889999999998875
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=87.33 E-value=0.072 Score=37.90 Aligned_cols=14 Identities=43% Similarity=0.883 Sum_probs=7.9
Q ss_pred cCCccceEeeccCc
Q 038559 65 ALPSLKYLQLHKCL 78 (137)
Q Consensus 65 ~mp~L~~L~i~~c~ 78 (137)
..++|+.|.+.+|.
T Consensus 241 ~~~~L~~L~Ls~n~ 254 (344)
T d2ca6a1 241 SWPNLRELGLNDCL 254 (344)
T ss_dssp GCTTCCEEECTTCC
T ss_pred ccccchhhhhhcCc
Confidence 35556666665553
No 36
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=87.30 E-value=0.13 Score=33.08 Aligned_cols=89 Identities=12% Similarity=0.140 Sum_probs=53.5
Q ss_pred ccCCCccceeeecccccce--eccceec-CccCcccccEEEeccccccce--eeec--CCcCCccceEeeccCcc----c
Q 038559 12 IQLLPNLKTLTLWLASKAK--QLEKEFC-SVGGFHKLEILIIAFHVLEEW--TEIE--EGALPSLKYLQLHKCLK----L 80 (137)
Q Consensus 12 L~~Lp~L~~L~L~~~~~~~--~l~~~~~-~~~~f~~Lk~L~l~~~~~~~~--~~~~--~g~mp~L~~L~i~~c~~----l 80 (137)
...-|+|+.|.|.+...+. .+. .++ .-...++|++|.+.++.+..- ..+. ....+.|+.|.+.+|.- .
T Consensus 11 ~~n~~~L~~L~L~~~~~i~~~~~~-~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~ 89 (167)
T d1pgva_ 11 REDDTDLKEVNINNMKRVSKERIR-SLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 89 (167)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHH-HHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HhCCCCCcEEEeCCCCCCCHHHHH-HHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHH
Confidence 3456999999998543221 110 011 112457799999988543211 0111 12467899999988852 1
Q ss_pred ccccccccCCCCCCEEEEcCC
Q 038559 81 RMLLEDLQFVATLKQLQILPL 101 (137)
Q Consensus 81 ~~lp~gl~~l~sL~~L~i~~~ 101 (137)
..+-.++.+-++|++|.+.++
T Consensus 90 ~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 90 ARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHhCCcCCEEECCCC
Confidence 234446778889999999765
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.72 E-value=0.056 Score=39.05 Aligned_cols=83 Identities=17% Similarity=0.210 Sum_probs=50.2
Q ss_pred Cccceeeecccc-cceeccceecCccCcccccEEEeccccccce--eeec--CCcCCccceEeeccCccc-----ccccc
Q 038559 16 PNLKTLTLWLAS-KAKQLEKEFCSVGGFHKLEILIIAFHVLEEW--TEIE--EGALPSLKYLQLHKCLKL-----RMLLE 85 (137)
Q Consensus 16 p~L~~L~L~~~~-~~~~l~~~~~~~~~f~~Lk~L~l~~~~~~~~--~~~~--~g~mp~L~~L~i~~c~~l-----~~lp~ 85 (137)
++|+.|+|.... ....+ .+. ...+++|++|.+.++.+..- ..+. ...+|+|+.|.+.++. + ..+..
T Consensus 2 ~~l~~ld~~~~~i~~~~~-~~l--~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~l~~ 77 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARW-AEL--LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE-LGDVGVHCVLQ 77 (460)
T ss_dssp EEEEEEEEESCCCCHHHH-HHH--HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHHHHH
T ss_pred CCCCEEEeeCCcCChHHH-HHH--HHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCc-CChHHHHHHHH
Confidence 478899996322 11111 001 12578999999998753210 0011 1468999999998764 3 23444
Q ss_pred cccC-CCCCCEEEEcCCC
Q 038559 86 DLQF-VATLKQLQILPLL 102 (137)
Q Consensus 86 gl~~-l~sL~~L~i~~~~ 102 (137)
++.. ..+|++|.+++|.
T Consensus 78 ~l~~~~~~L~~L~L~~n~ 95 (460)
T d1z7xw1 78 GLQTPSCKIQKLSLQNCC 95 (460)
T ss_dssp TTCSTTCCCCEEECTTSC
T ss_pred HHhcCCCCCCEEECCCCC
Confidence 4443 3589999999886
No 38
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=80.85 E-value=0.18 Score=35.70 Aligned_cols=62 Identities=16% Similarity=0.054 Sum_probs=39.9
Q ss_pred CcccccEEEeccccccc-----eeeecCCcCCccceEeeccCcc----cccccccccCCCCCCEEEEcCCC
Q 038559 41 GFHKLEILIIAFHVLEE-----WTEIEEGALPSLKYLQLHKCLK----LRMLLEDLQFVATLKQLQILPLL 102 (137)
Q Consensus 41 ~f~~Lk~L~l~~~~~~~-----~~~~~~g~mp~L~~L~i~~c~~----l~~lp~gl~~l~sL~~L~i~~~~ 102 (137)
.+++|++|.+..+.... .+......+++|+.|.+..+.- ...+...+.+.++|++|.+.+|.
T Consensus 184 ~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~ 254 (344)
T d2ca6a1 184 SHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCL 254 (344)
T ss_dssp HCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCC
T ss_pred hhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCc
Confidence 35678888887643211 1101123578899999977652 23355567788899999998886
No 39
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.59 E-value=0.11 Score=33.35 Aligned_cols=35 Identities=26% Similarity=0.208 Sum_probs=16.2
Q ss_pred CCccceEeeccCccccc---ccccccCCCCCCEEEEcCC
Q 038559 66 LPSLKYLQLHKCLKLRM---LLEDLQFVATLKQLQILPL 101 (137)
Q Consensus 66 mp~L~~L~i~~c~~l~~---lp~gl~~l~sL~~L~i~~~ 101 (137)
+|.|+.|.+.+.. ++. ++..++.+++|+.|+++++
T Consensus 64 ~~~L~~L~Ls~N~-i~~l~~~~~~~~~l~~L~~L~Ls~N 101 (162)
T d1koha1 64 IPELLSLNLSNNR-LYRLDDMSSIVQKAPNLKILNLSGN 101 (162)
T ss_dssp CTTCCCCCCCSSC-CCCCSGGGTHHHHSTTCCCCCCTTS
T ss_pred CCCCCEeeCCCcc-ccCCchhHHHHhhCCcccccccccC
Confidence 5555555554432 222 2233344555555555544
No 40
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=75.69 E-value=0.4 Score=30.34 Aligned_cols=90 Identities=17% Similarity=0.059 Sum_probs=49.1
Q ss_pred ccCCCccceeeecccccceecc-ceecC-ccCcccccEEEeccccccce--eeec--CCcCCccceEeeccCcc----cc
Q 038559 12 IQLLPNLKTLTLWLASKAKQLE-KEFCS-VGGFHKLEILIIAFHVLEEW--TEIE--EGALPSLKYLQLHKCLK----LR 81 (137)
Q Consensus 12 L~~Lp~L~~L~L~~~~~~~~l~-~~~~~-~~~f~~Lk~L~l~~~~~~~~--~~~~--~g~mp~L~~L~i~~c~~----l~ 81 (137)
....|+|++|.|.+...+..-. ..++. ....+.|++|++.++.+... ..+. ....++++.+.+..|.- ..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 3466889999887543221100 00111 12567888898887543211 0010 12456788888877652 12
Q ss_pred cccccccCCCCCCEEEEcCC
Q 038559 82 MLLEDLQFVATLKQLQILPL 101 (137)
Q Consensus 82 ~lp~gl~~l~sL~~L~i~~~ 101 (137)
.+-..+...++|+.+++..+
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~ 112 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQ 112 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCC
T ss_pred HHHHHHHhCccccEEeeccC
Confidence 34445666778887777543
Done!