Query 038563
Match_columns 198
No_of_seqs 199 out of 1624
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 21:27:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 100.0 1.3E-48 4.5E-53 317.5 22.8 190 6-196 1-200 (201)
2 3kgl_A Cruciferin; 11S SEED gl 100.0 2.3E-33 7.9E-38 252.4 19.0 154 39-194 287-445 (466)
3 3ksc_A LEGA class, prolegumin; 100.0 3.6E-32 1.2E-36 246.2 21.0 156 36-193 319-479 (496)
4 3qac_A 11S globulin SEED stora 100.0 4.2E-32 1.4E-36 244.1 18.4 156 38-195 286-446 (465)
5 2e9q_A 11S globulin subunit be 100.0 7E-32 2.4E-36 243.1 18.3 154 39-194 286-444 (459)
6 3fz3_A Prunin; TREE NUT allerg 100.0 2.5E-31 8.5E-36 241.0 18.1 157 37-195 356-517 (531)
7 1uij_A Beta subunit of beta co 100.0 2.6E-30 9E-35 230.6 17.9 158 35-195 211-386 (416)
8 3c3v_A Arachin ARAH3 isoform; 100.0 6.4E-30 2.2E-34 232.3 20.4 155 38-194 335-494 (510)
9 2cav_A Protein (canavalin); vi 100.0 3E-30 1E-34 231.9 17.7 157 36-195 244-415 (445)
10 1fxz_A Glycinin G1; proglycini 100.0 9.3E-30 3.2E-34 230.2 20.7 154 39-194 302-460 (476)
11 2ea7_A 7S globulin-1; beta bar 100.0 7.1E-30 2.4E-34 228.9 17.4 157 35-194 228-401 (434)
12 2d5f_A Glycinin A3B4 subunit; 100.0 1E-29 3.6E-34 230.7 18.0 155 38-195 330-487 (493)
13 3s7i_A Allergen ARA H 1, clone 100.0 4.6E-29 1.6E-33 222.4 15.7 157 37-196 226-412 (418)
14 1dgw_A Canavalin; duplicated s 100.0 2.5E-28 8.5E-33 194.7 16.8 151 37-192 2-167 (178)
15 2phl_A Phaseolin; plant SEED s 99.9 1.5E-26 5E-31 205.1 16.9 135 52-195 224-374 (397)
16 2vqa_A SLL1358 protein, MNCA; 99.9 2.9E-25 9.9E-30 193.2 19.4 159 32-194 195-353 (361)
17 2cav_A Protein (canavalin); vi 99.9 3.8E-25 1.3E-29 198.7 18.2 155 35-192 45-212 (445)
18 2ea7_A 7S globulin-1; beta bar 99.9 4.7E-25 1.6E-29 197.6 17.1 152 36-190 20-185 (434)
19 2e9q_A 11S globulin subunit be 99.9 4E-25 1.4E-29 199.1 16.4 140 52-194 43-237 (459)
20 1uij_A Beta subunit of beta co 99.9 3.7E-25 1.3E-29 197.4 15.6 154 36-192 8-176 (416)
21 2phl_A Phaseolin; plant SEED s 99.9 6.5E-25 2.2E-29 194.5 16.3 152 36-190 11-181 (397)
22 1fxz_A Glycinin G1; proglycini 99.9 1.6E-24 5.6E-29 195.9 14.8 140 52-194 28-229 (476)
23 3s7i_A Allergen ARA H 1, clone 99.9 4.2E-24 1.4E-28 190.5 16.5 135 52-191 20-169 (418)
24 3qac_A 11S globulin SEED stora 99.9 3.5E-24 1.2E-28 192.7 15.8 138 52-192 30-237 (465)
25 3ksc_A LEGA class, prolegumin; 99.9 9.4E-24 3.2E-28 191.2 15.6 136 52-190 26-214 (496)
26 2vqa_A SLL1358 protein, MNCA; 99.9 1.6E-22 5.5E-27 175.9 19.5 150 38-192 20-172 (361)
27 2d5f_A Glycinin A3B4 subunit; 99.9 1.1E-22 3.6E-27 184.7 16.3 140 52-194 25-232 (493)
28 3kgl_A Cruciferin; 11S SEED gl 99.9 7.3E-23 2.5E-27 184.1 15.1 139 52-193 23-246 (466)
29 3c3v_A Arachin ARAH3 isoform; 99.9 1.2E-22 4.2E-27 184.6 15.1 138 52-192 28-269 (510)
30 1j58_A YVRK protein; cupin, de 99.9 1.1E-20 3.7E-25 165.9 20.0 155 35-194 222-376 (385)
31 3fz3_A Prunin; TREE NUT allerg 99.9 1.6E-21 5.5E-26 176.9 14.7 138 52-192 28-297 (531)
32 1j58_A YVRK protein; cupin, de 99.9 9E-21 3.1E-25 166.4 15.9 147 39-191 48-196 (385)
33 1dgw_X Canavalin; duplicated s 99.8 5.3E-19 1.8E-23 123.3 7.1 75 41-115 4-78 (79)
34 3h8u_A Uncharacterized conserv 99.6 4.2E-15 1.4E-19 110.2 11.5 84 72-159 38-121 (125)
35 1lr5_A Auxin binding protein 1 99.5 5.3E-14 1.8E-18 109.3 12.4 114 72-188 40-158 (163)
36 3l2h_A Putative sugar phosphat 99.5 5.7E-14 2E-18 108.9 12.2 85 72-161 45-131 (162)
37 2xlg_A SLL1785 protein, CUCA; 99.5 1.1E-14 3.7E-19 121.0 8.2 82 70-151 40-137 (239)
38 3ibm_A Cupin 2, conserved barr 99.5 2.5E-13 8.6E-18 106.7 15.6 117 31-154 11-132 (167)
39 1v70_A Probable antibiotics sy 99.5 1.2E-13 4.2E-18 97.8 12.5 77 72-153 27-103 (105)
40 2fqp_A Hypothetical protein BP 99.5 6.1E-14 2.1E-18 100.0 9.8 76 72-151 17-93 (97)
41 1x82_A Glucose-6-phosphate iso 99.5 3.4E-13 1.2E-17 108.0 13.6 83 72-154 66-156 (190)
42 3i7d_A Sugar phosphate isomera 99.5 8.8E-13 3E-17 103.0 15.1 85 72-161 42-129 (163)
43 2gu9_A Tetracenomycin polyketi 99.5 5.3E-13 1.8E-17 96.1 12.3 78 71-153 19-98 (113)
44 2oa2_A BH2720 protein; 1017534 99.5 4.2E-13 1.4E-17 102.8 12.3 83 72-154 42-125 (148)
45 3lag_A Uncharacterized protein 99.5 2.4E-14 8.1E-19 103.2 4.7 77 72-150 16-92 (98)
46 4e2g_A Cupin 2 conserved barre 99.5 4.1E-13 1.4E-17 99.3 10.5 77 72-155 40-116 (126)
47 3ht1_A REMF protein; cupin fol 99.5 8.1E-13 2.8E-17 99.6 12.1 85 72-160 38-122 (145)
48 3es1_A Cupin 2, conserved barr 99.4 2.8E-13 9.5E-18 107.3 9.4 79 72-156 78-156 (172)
49 1o4t_A Putative oxalate decarb 99.4 1.2E-12 4.3E-17 98.5 12.6 77 70-151 54-130 (133)
50 3kgz_A Cupin 2 conserved barre 99.4 1E-12 3.4E-17 102.3 12.3 79 71-155 42-120 (156)
51 3fjs_A Uncharacterized protein 99.4 1E-12 3.5E-17 96.6 10.9 74 72-151 35-108 (114)
52 3jzv_A Uncharacterized protein 99.4 2.1E-12 7.1E-17 101.5 13.0 78 71-154 51-128 (166)
53 2pfw_A Cupin 2, conserved barr 99.4 2.1E-12 7E-17 94.0 12.0 77 72-156 33-109 (116)
54 2f4p_A Hypothetical protein TM 99.4 3.6E-12 1.2E-16 97.8 13.6 97 71-177 46-142 (147)
55 2ozi_A Hypothetical protein RP 99.4 4.3E-13 1.5E-17 96.8 7.0 78 72-151 16-93 (98)
56 1vj2_A Novel manganese-contain 99.4 2.5E-12 8.5E-17 95.8 11.0 78 70-153 45-122 (126)
57 2b8m_A Hypothetical protein MJ 99.4 3.6E-12 1.2E-16 93.2 11.4 75 72-152 26-101 (117)
58 2bnm_A Epoxidase; oxidoreducta 99.4 3.9E-12 1.3E-16 101.2 11.9 82 68-151 112-197 (198)
59 3cew_A Uncharacterized cupin p 99.4 4.6E-12 1.6E-16 93.8 11.4 80 70-154 23-103 (125)
60 4i4a_A Similar to unknown prot 99.4 6.5E-12 2.2E-16 93.0 12.1 76 71-152 32-107 (128)
61 2o8q_A Hypothetical protein; c 99.4 4.8E-12 1.6E-16 94.7 11.1 78 72-155 42-120 (134)
62 2vpv_A Protein MIF2, MIF2P; nu 99.4 4.8E-12 1.6E-16 99.6 11.1 75 72-151 87-162 (166)
63 1yhf_A Hypothetical protein SP 99.3 2.2E-11 7.7E-16 88.3 12.9 73 72-152 39-111 (115)
64 1rc6_A Hypothetical protein YL 99.3 6.2E-12 2.1E-16 104.9 11.1 78 70-152 176-254 (261)
65 1y9q_A Transcriptional regulat 99.3 1E-11 3.4E-16 98.6 11.1 78 69-153 100-179 (192)
66 3h7j_A Bacilysin biosynthesis 99.3 1.4E-11 4.8E-16 101.8 11.5 80 72-157 144-224 (243)
67 2q30_A Uncharacterized protein 99.3 2.1E-11 7.3E-16 87.4 10.7 76 72-153 32-108 (110)
68 1y3t_A Hypothetical protein YX 99.3 3.4E-11 1.2E-15 102.8 12.9 77 72-154 45-121 (337)
69 2d40_A Z3393, putative gentisa 99.2 2.7E-11 9.3E-16 105.7 10.4 76 72-152 99-174 (354)
70 1juh_A Quercetin 2,3-dioxygena 99.2 5.5E-11 1.9E-15 103.4 12.4 80 72-153 47-129 (350)
71 3lwc_A Uncharacterized protein 99.2 1.9E-10 6.4E-15 85.5 13.5 73 72-152 39-111 (119)
72 2d40_A Z3393, putative gentisa 99.2 7.4E-11 2.5E-15 102.9 12.9 90 52-151 248-338 (354)
73 1sef_A Conserved hypothetical 99.2 1.1E-10 3.8E-15 98.0 13.4 76 71-152 180-257 (274)
74 2ozj_A Cupin 2, conserved barr 99.2 1.2E-10 4E-15 84.7 11.6 73 72-152 37-109 (114)
75 2pyt_A Ethanolamine utilizatio 99.2 1.1E-10 3.8E-15 88.4 10.5 72 72-153 56-127 (133)
76 1sfn_A Conserved hypothetical 99.2 2.2E-10 7.4E-15 95.0 13.1 77 70-152 162-239 (246)
77 3h7j_A Bacilysin biosynthesis 99.2 1.2E-10 4.1E-15 96.1 11.4 74 73-152 34-108 (243)
78 1rc6_A Hypothetical protein YL 99.2 1E-10 3.6E-15 97.4 11.0 77 71-152 57-134 (261)
79 1y3t_A Hypothetical protein YX 99.2 2.7E-10 9.3E-15 97.2 13.6 74 75-154 219-293 (337)
80 1sq4_A GLXB, glyoxylate-induce 99.2 8.4E-11 2.9E-15 99.3 10.2 76 71-152 66-143 (278)
81 3nw4_A Gentisate 1,2-dioxygena 99.1 2.3E-10 7.8E-15 100.3 11.0 77 72-153 102-178 (368)
82 2i45_A Hypothetical protein; n 99.1 1.4E-10 4.8E-15 83.5 8.0 68 75-150 30-98 (107)
83 1sef_A Conserved hypothetical 99.1 2E-10 6.8E-15 96.5 10.2 77 71-152 60-137 (274)
84 3rns_A Cupin 2 conserved barre 99.1 4.5E-10 1.5E-14 91.8 12.0 73 72-151 152-224 (227)
85 1sq4_A GLXB, glyoxylate-induce 99.1 5.3E-10 1.8E-14 94.4 12.1 87 65-157 183-271 (278)
86 4e2q_A Ureidoglycine aminohydr 99.1 3E-10 1E-14 95.5 10.3 105 32-152 38-142 (266)
87 4axo_A EUTQ, ethanolamine util 99.1 7.6E-10 2.6E-14 85.7 11.8 72 72-153 65-136 (151)
88 4h7l_A Uncharacterized protein 99.1 3.2E-10 1.1E-14 88.3 9.6 73 71-154 45-119 (157)
89 3bu7_A Gentisate 1,2-dioxygena 99.1 3.7E-10 1.3E-14 99.8 11.2 77 71-152 121-198 (394)
90 3d82_A Cupin 2, conserved barr 99.1 8.5E-10 2.9E-14 77.8 11.0 59 84-149 40-98 (102)
91 2opk_A Hypothetical protein; p 99.1 6.4E-10 2.2E-14 81.4 10.3 76 72-152 30-109 (112)
92 4b29_A Dimethylsulfoniopropion 99.1 6.4E-10 2.2E-14 90.6 10.8 75 72-152 131-205 (217)
93 3rns_A Cupin 2 conserved barre 99.1 9.9E-10 3.4E-14 89.8 12.0 74 72-153 36-109 (227)
94 3bu7_A Gentisate 1,2-dioxygena 99.1 1.6E-09 5.3E-14 95.8 14.1 93 53-152 275-368 (394)
95 4e2q_A Ureidoglycine aminohydr 99.0 2.2E-09 7.7E-14 90.2 12.6 75 70-150 183-258 (266)
96 1vr3_A Acireductone dioxygenas 99.0 4E-09 1.4E-13 84.6 12.7 87 73-161 74-170 (191)
97 1dgw_Y Canavalin; duplicated s 99.0 6.9E-09 2.3E-13 74.0 10.3 76 116-194 5-84 (93)
98 1o5u_A Novel thermotoga mariti 98.9 8.1E-09 2.8E-13 74.5 9.3 62 77-145 35-96 (101)
99 3ebr_A Uncharacterized RMLC-li 98.9 6.4E-09 2.2E-13 81.1 9.3 87 53-152 27-115 (159)
100 1sfn_A Conserved hypothetical 98.9 8.6E-09 2.9E-13 85.3 10.0 71 72-152 49-119 (246)
101 2q1z_B Anti-sigma factor CHRR, 98.8 1.8E-08 6E-13 80.9 10.0 70 73-152 125-194 (195)
102 3bcw_A Uncharacterized protein 98.8 1.2E-08 4.2E-13 76.2 8.5 74 72-152 48-121 (123)
103 1zrr_A E-2/E-2' protein; nicke 98.8 2.9E-09 1E-13 84.6 5.1 71 86-159 93-163 (179)
104 2o1q_A Putative acetyl/propion 98.8 7.6E-09 2.6E-13 79.2 6.7 76 72-154 43-120 (145)
105 2y0o_A Probable D-lyxose ketol 98.8 8.1E-08 2.8E-12 75.9 12.3 79 73-155 53-155 (175)
106 3cjx_A Protein of unknown func 98.8 4.2E-08 1.4E-12 76.9 9.5 74 72-152 42-117 (165)
107 3eqe_A Putative cystein deoxyg 98.7 2.4E-07 8.2E-12 73.0 13.6 85 72-156 68-156 (171)
108 3st7_A Capsular polysaccharide 98.7 2.5E-07 8.7E-12 79.4 12.7 83 75-159 274-365 (369)
109 1juh_A Quercetin 2,3-dioxygena 98.7 1.1E-07 3.8E-12 82.5 10.5 77 69-152 245-325 (350)
110 1yfu_A 3-hydroxyanthranilate-3 98.6 2.8E-07 9.7E-12 72.4 11.0 67 72-141 35-101 (174)
111 3bal_A Acetylacetone-cleaving 98.6 9.5E-08 3.3E-12 74.0 8.1 108 31-152 11-120 (153)
112 3nw4_A Gentisate 1,2-dioxygena 98.6 3.3E-07 1.1E-11 80.2 11.0 88 54-151 260-349 (368)
113 2gm6_A Cysteine dioxygenase ty 98.5 1E-06 3.4E-11 71.5 11.9 81 72-153 78-167 (208)
114 3d0j_A Uncharacterized protein 98.5 2.8E-07 9.5E-12 70.0 7.0 69 82-152 38-109 (140)
115 2arc_A ARAC, arabinose operon 98.4 1.7E-06 5.7E-11 65.4 9.6 60 86-151 31-91 (164)
116 3o14_A Anti-ecfsigma factor, C 98.4 2.3E-06 8E-11 70.0 10.8 85 53-153 27-111 (223)
117 1zvf_A 3-hydroxyanthranilate 3 98.4 3.2E-06 1.1E-10 66.4 10.4 60 79-140 40-103 (176)
118 3eln_A Cysteine dioxygenase ty 98.3 1.2E-05 4.1E-10 64.7 13.8 86 72-157 69-163 (200)
119 2qnk_A 3-hydroxyanthranilate 3 98.2 6.3E-06 2.2E-10 69.2 10.1 68 81-152 39-106 (286)
120 1yud_A Hypothetical protein SO 98.1 8.8E-05 3E-09 58.2 14.2 131 52-190 27-165 (170)
121 2pa7_A DTDP-6-deoxy-3,4-keto-h 98.1 5.4E-05 1.9E-09 57.7 12.7 97 52-152 15-113 (141)
122 3myx_A Uncharacterized protein 98.1 5.3E-05 1.8E-09 62.5 12.9 81 72-161 46-130 (238)
123 3ejk_A DTDP sugar isomerase; Y 98.1 9.2E-05 3.2E-09 58.3 12.9 74 79-152 59-141 (174)
124 3uss_A Putative uncharacterize 98.0 0.00013 4.4E-09 59.1 12.6 83 72-155 72-163 (211)
125 3es4_A Uncharacterized protein 97.9 9.9E-05 3.4E-09 54.4 9.8 62 73-140 42-103 (116)
126 3myx_A Uncharacterized protein 97.7 0.00023 8E-09 58.6 10.2 63 72-140 166-228 (238)
127 3gbg_A TCP pilus virulence reg 97.6 0.00064 2.2E-08 55.8 11.1 72 72-148 6-82 (276)
128 3o14_A Anti-ecfsigma factor, C 97.5 0.0005 1.7E-08 56.0 9.7 79 53-150 133-211 (223)
129 2vec_A YHAK, pirin-like protei 97.4 0.0015 5E-08 54.4 10.7 71 75-150 66-140 (256)
130 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 97.3 0.0044 1.5E-07 49.0 12.7 68 81-149 56-133 (185)
131 3kmh_A D-lyxose isomerase; cup 97.3 0.0011 3.8E-08 54.3 9.0 79 72-150 105-206 (246)
132 3ryk_A DTDP-4-dehydrorhamnose 97.2 0.0035 1.2E-07 50.4 11.1 68 81-148 78-156 (205)
133 2ixk_A DTDP-4-dehydrorhamnose 97.2 0.0066 2.3E-07 48.0 12.5 68 81-149 57-134 (184)
134 1wlt_A 176AA long hypothetical 97.2 0.0058 2E-07 48.8 11.9 64 81-144 73-147 (196)
135 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 97.2 0.0034 1.1E-07 50.3 10.3 71 80-152 67-143 (197)
136 3bb6_A Uncharacterized protein 97.1 0.0026 8.9E-08 47.4 8.4 65 82-147 23-94 (127)
137 1tq5_A Protein YHHW; bicupin, 97.1 0.0054 1.8E-07 50.5 11.2 70 74-148 42-115 (242)
138 1dzr_A DTDP-4-dehydrorhamnose 97.1 0.01 3.5E-07 46.8 12.3 67 81-148 55-132 (183)
139 1vrb_A Putative asparaginyl hy 97.0 0.0044 1.5E-07 53.4 10.6 71 78-149 145-250 (342)
140 2c0z_A NOVW; isomerase, epimer 97.0 0.011 3.9E-07 47.8 12.3 64 81-144 63-137 (216)
141 1oi6_A PCZA361.16; epimerase, 97.0 0.011 3.9E-07 47.4 12.2 67 81-148 55-132 (205)
142 4gjz_A Lysine-specific demethy 97.0 0.0028 9.6E-08 50.4 8.1 64 78-142 128-226 (235)
143 4hn1_A Putative 3-epimerase in 97.0 0.011 3.6E-07 47.5 11.4 69 81-149 52-131 (201)
144 1upi_A DTDP-4-dehydrorhamnose 97.0 0.017 5.8E-07 47.0 12.8 64 81-144 74-148 (225)
145 3d8c_A Hypoxia-inducible facto 96.7 0.011 3.6E-07 51.0 10.1 72 78-150 187-295 (349)
146 2qdr_A Uncharacterized protein 96.6 0.015 5.1E-07 48.4 9.9 70 72-151 90-160 (303)
147 1e5r_A Proline oxidase; oxidor 96.5 0.0051 1.7E-07 52.0 6.4 72 73-148 91-171 (290)
148 1eyb_A Homogentisate 1,2-dioxy 96.3 0.063 2.2E-06 47.9 12.9 104 36-150 118-227 (471)
149 2p17_A Pirin-like protein; GK1 96.3 0.029 9.9E-07 46.9 10.0 103 52-162 19-133 (277)
150 1j1l_A Pirin; beta sandwich, c 96.2 0.043 1.5E-06 46.3 10.8 104 52-162 19-135 (290)
151 2qjv_A Uncharacterized IOLB-li 96.1 0.091 3.1E-06 43.8 12.3 80 72-153 152-247 (270)
152 2xdv_A MYC-induced nuclear ant 96.0 0.027 9.4E-07 50.2 9.2 63 78-141 143-223 (442)
153 3al5_A HTYW5, JMJC domain-cont 96.0 0.027 9.3E-07 48.2 8.9 66 81-149 175-270 (338)
154 3rcq_A Aspartyl/asparaginyl be 95.7 0.12 4.2E-06 41.1 10.9 78 74-157 103-185 (197)
155 3k2o_A Bifunctional arginine d 95.6 0.068 2.3E-06 45.9 9.5 64 79-142 177-281 (336)
156 3kv5_D JMJC domain-containing 95.5 0.059 2E-06 48.6 9.1 62 81-142 274-361 (488)
157 4diq_A Lysine-specific demethy 95.3 0.13 4.4E-06 46.4 10.6 68 77-145 167-256 (489)
158 3loi_A Putative uncharacterize 95.3 0.77 2.6E-05 35.7 15.8 128 52-190 25-168 (172)
159 3m3i_A Putative uncharacterize 95.2 0.96 3.3E-05 36.6 15.7 131 52-191 34-211 (225)
160 3kv4_A PHD finger protein 8; e 95.1 0.13 4.5E-06 45.8 10.0 64 80-143 238-327 (447)
161 2yu1_A JMJC domain-containing 95.1 0.092 3.2E-06 46.9 9.0 64 80-143 203-292 (451)
162 2qnk_A 3-hydroxyanthranilate 3 95.0 0.088 3E-06 44.1 8.1 54 80-140 214-267 (286)
163 2oyz_A UPF0345 protein VPA0057 95.0 0.21 7.3E-06 35.1 8.8 64 79-150 29-92 (94)
164 3k3o_A PHF8, PHD finger protei 94.9 0.12 4.1E-06 45.0 9.0 63 80-142 154-242 (371)
165 3kv9_A JMJC domain-containing 94.6 0.16 5.4E-06 44.6 9.1 62 81-142 183-270 (397)
166 3hqx_A UPF0345 protein aciad03 94.2 0.24 8.1E-06 35.8 7.7 67 79-151 43-109 (111)
167 3pua_A GRC5, PHD finger protei 94.1 0.25 8.4E-06 43.4 9.1 63 80-142 181-269 (392)
168 3pur_A Lysine-specific demethy 93.1 0.26 8.9E-06 44.7 7.8 62 80-141 303-390 (528)
169 1xru_A 4-deoxy-L-threo-5-hexos 93.1 0.79 2.7E-05 38.4 10.1 78 72-152 179-263 (282)
170 2rg4_A Uncharacterized protein 92.9 0.45 1.5E-05 38.0 8.3 74 74-147 104-200 (216)
171 3eo6_A Protein of unknown func 92.8 0.55 1.9E-05 33.6 7.6 55 79-139 42-96 (106)
172 3dl3_A Tellurite resistance pr 92.5 1.3 4.3E-05 32.4 9.4 42 97-138 41-85 (119)
173 1qwr_A Mannose-6-phosphate iso 92.4 1.2 4E-05 37.8 10.5 58 72-137 250-307 (319)
174 1znp_A Hypothetical protein AT 91.8 3.4 0.00012 31.5 13.7 89 52-141 20-115 (154)
175 1pmi_A PMI, phosphomannose iso 91.4 1.5 5.1E-05 38.9 10.5 76 72-151 356-437 (440)
176 1tq5_A Protein YHHW; bicupin, 91.1 1.5 5.1E-05 35.7 9.5 68 72-150 159-226 (242)
177 2p17_A Pirin-like protein; GK1 91.0 3.2 0.00011 34.3 11.7 71 71-150 165-240 (277)
178 1ywk_A 4-deoxy-L-threo-5-hexos 90.8 0.99 3.4E-05 37.9 8.2 80 72-154 179-265 (289)
179 2wfp_A Mannose-6-phosphate iso 89.7 1.1 3.6E-05 39.2 7.8 57 72-136 323-379 (394)
180 1zx5_A Mannosephosphate isomer 89.1 2.9 9.8E-05 35.0 9.8 57 72-138 229-286 (300)
181 1j1l_A Pirin; beta sandwich, c 88.4 4.6 0.00016 33.7 10.7 77 71-152 167-243 (290)
182 2pqq_A Putative transcriptiona 88.1 1.4 4.7E-05 31.2 6.4 53 75-128 28-81 (149)
183 2vec_A YHAK, pirin-like protei 87.6 3.8 0.00013 33.6 9.5 70 72-148 181-250 (256)
184 3mdp_A Cyclic nucleotide-bindi 87.5 1.1 3.7E-05 31.6 5.5 53 75-128 29-85 (142)
185 3dn7_A Cyclic nucleotide bindi 87.3 2.7 9.2E-05 31.4 7.9 52 76-128 31-83 (194)
186 2oz6_A Virulence factor regula 87.3 2.7 9.1E-05 31.7 7.9 52 76-128 14-66 (207)
187 2qjv_A Uncharacterized IOLB-li 87.2 10 0.00035 31.3 11.9 71 73-150 29-108 (270)
188 3gyd_A CNMP-BD protein, cyclic 86.6 3.3 0.00011 31.2 8.1 52 75-127 62-114 (187)
189 3fx3_A Cyclic nucleotide-bindi 86.6 2.9 9.8E-05 32.3 7.9 51 76-127 35-86 (237)
190 3dv8_A Transcriptional regulat 86.5 3.4 0.00012 31.3 8.3 117 76-195 27-195 (220)
191 3ryp_A Catabolite gene activat 86.0 3.4 0.00012 31.1 7.9 116 77-195 21-193 (210)
192 3idb_B CAMP-dependent protein 85.5 4.1 0.00014 29.5 7.9 51 75-127 61-112 (161)
193 4ev0_A Transcription regulator 85.5 2.7 9.2E-05 31.9 7.1 117 76-195 23-189 (216)
194 3iwz_A CAP-like, catabolite ac 84.8 3.1 0.00011 31.8 7.3 52 76-128 35-87 (230)
195 1zyb_A Transcription regulator 84.5 2.7 9.3E-05 32.6 6.9 117 75-194 43-211 (232)
196 3d0s_A Transcriptional regulat 84.4 3.6 0.00012 31.5 7.5 115 77-194 31-202 (227)
197 2bgc_A PRFA; bacterial infecti 83.9 4.3 0.00015 31.6 7.8 71 77-150 20-98 (238)
198 3b02_A Transcriptional regulat 83.9 3 0.0001 31.4 6.7 50 79-129 3-53 (195)
199 2z69_A DNR protein; beta barre 83.7 1.2 4.2E-05 31.8 4.2 52 75-127 35-87 (154)
200 3kcc_A Catabolite gene activat 83.7 4.4 0.00015 32.1 7.9 117 76-195 70-243 (260)
201 1ft9_A Carbon monoxide oxidati 83.0 11 0.00038 28.6 9.9 114 75-194 23-188 (222)
202 3e97_A Transcriptional regulat 83.0 3.1 0.00011 32.0 6.6 53 75-128 29-82 (231)
203 1o5l_A Transcriptional regulat 82.5 2.9 0.0001 31.9 6.3 52 75-127 22-74 (213)
204 2ypd_A Probable JMJC domain-co 82.5 1.4 4.9E-05 38.4 4.7 39 116-154 292-330 (392)
205 3la7_A Global nitrogen regulat 82.2 4.2 0.00014 31.8 7.2 53 75-128 43-96 (243)
206 2fmy_A COOA, carbon monoxide o 81.4 14 0.00048 27.9 9.9 114 75-194 27-192 (220)
207 2zcw_A TTHA1359, transcription 81.3 4.2 0.00014 30.6 6.7 114 77-194 7-171 (202)
208 3e6c_C CPRK, cyclic nucleotide 81.1 4.6 0.00016 31.6 7.0 118 75-195 32-203 (250)
209 1xsq_A Ureidoglycolate hydrola 80.9 6.6 0.00022 30.2 7.5 79 72-150 53-139 (168)
210 2gau_A Transcriptional regulat 80.9 2.8 9.6E-05 32.3 5.6 52 75-127 33-85 (232)
211 2ptm_A Hyperpolarization-activ 80.6 3.8 0.00013 30.9 6.2 50 74-127 93-142 (198)
212 4ava_A Lysine acetyltransferas 80.3 4 0.00014 33.4 6.7 52 75-127 36-87 (333)
213 2qcs_B CAMP-dependent protein 78.8 8.2 0.00028 30.7 8.0 52 75-127 180-233 (291)
214 1zx5_A Mannosephosphate isomer 78.8 1.4 4.9E-05 36.9 3.4 46 94-139 117-180 (300)
215 3bpz_A Potassium/sodium hyperp 78.8 4.6 0.00016 30.6 6.2 48 75-127 95-142 (202)
216 1xe7_A YML079WP, hypothetical 77.9 24 0.00082 27.9 14.9 132 52-192 43-200 (203)
217 2bdr_A Ureidoglycolate hydrola 77.4 9 0.00031 29.6 7.4 80 72-151 55-142 (175)
218 1qwr_A Mannose-6-phosphate iso 77.2 1.7 5.8E-05 36.7 3.4 46 93-138 116-179 (319)
219 1ywk_A 4-deoxy-L-threo-5-hexos 74.4 9.4 0.00032 31.9 7.2 66 79-149 63-131 (289)
220 2d93_A RAP guanine nucleotide 72.7 4.8 0.00017 28.1 4.5 48 75-127 39-87 (134)
221 3pna_A CAMP-dependent protein 72.5 12 0.00042 26.6 6.8 48 75-127 61-108 (154)
222 4f8a_A Potassium voltage-gated 72.4 13 0.00046 26.3 7.0 49 76-129 51-99 (160)
223 2wfp_A Mannose-6-phosphate iso 71.4 3.3 0.00011 36.1 3.9 24 116-139 239-262 (394)
224 3ocp_A PRKG1 protein; serine/t 71.1 11 0.00038 26.2 6.2 48 75-127 46-93 (139)
225 1o7f_A CAMP-dependent RAP1 gua 69.7 9.3 0.00032 32.8 6.4 54 75-129 65-121 (469)
226 3tnp_B CAMP-dependent protein 68.6 19 0.00064 30.9 8.1 52 75-128 168-220 (416)
227 2xxz_A Lysine-specific demethy 64.8 10 0.00035 32.3 5.5 33 116-148 278-310 (332)
228 3shr_A CGMP-dependent protein 64.4 16 0.00054 29.1 6.5 52 75-127 180-233 (299)
229 3dkw_A DNR protein; CRP-FNR, H 64.2 2.6 8.9E-05 32.2 1.6 53 76-129 33-86 (227)
230 1yll_A PA5104, conserved hypot 62.5 45 0.0015 26.1 8.5 88 35-132 87-174 (200)
231 3g7d_A PHPD; non heme Fe(II) d 61.9 32 0.0011 29.6 7.9 40 98-138 358-397 (443)
232 1vp6_A CNBD, cyclic-nucleotide 60.6 9 0.00031 26.5 3.8 45 76-127 35-79 (138)
233 1pmi_A PMI, phosphomannose iso 60.6 7 0.00024 34.5 3.9 22 118-139 267-288 (440)
234 2qdr_A Uncharacterized protein 60.4 34 0.0012 28.4 7.6 64 72-153 216-287 (303)
235 2qcs_B CAMP-dependent protein 59.6 23 0.00077 28.0 6.5 48 75-127 62-109 (291)
236 1s4c_A Protein HI0227; double- 58.6 19 0.00064 26.8 5.5 54 86-139 60-134 (155)
237 3of1_A CAMP-dependent protein 58.6 21 0.00071 27.2 6.0 49 75-127 148-196 (246)
238 3ukn_A Novel protein similar t 57.3 17 0.00058 27.4 5.2 51 74-129 97-147 (212)
239 3avr_A Lysine-specific demethy 53.4 19 0.00066 32.6 5.5 32 117-148 338-369 (531)
240 4ask_A Lysine-specific demethy 53.2 13 0.00044 33.5 4.3 32 117-148 313-344 (510)
241 3of1_A CAMP-dependent protein 51.2 20 0.00068 27.3 4.7 47 76-127 31-77 (246)
242 1xru_A 4-deoxy-L-threo-5-hexos 46.7 39 0.0013 28.1 5.9 52 93-149 77-131 (282)
243 3shr_A CGMP-dependent protein 45.9 40 0.0014 26.7 5.9 49 75-128 62-110 (299)
244 3tnp_B CAMP-dependent protein 44.9 38 0.0013 28.9 6.0 52 75-127 290-348 (416)
245 2dkz_A Hypothetical protein LO 40.5 16 0.00055 24.8 2.2 31 163-194 47-77 (84)
246 1pcq_O Groes protein; chaperon 39.8 46 0.0016 23.1 4.6 23 111-133 49-71 (97)
247 4din_B CAMP-dependent protein 39.2 29 0.00099 29.2 4.2 49 78-127 274-324 (381)
248 4f7z_A RAP guanine nucleotide 39.1 74 0.0025 30.4 7.4 56 71-127 61-119 (999)
249 1wgp_A Probable cyclic nucleot 38.7 5.5 0.00019 27.7 -0.4 49 77-127 31-82 (137)
250 1o7f_A CAMP-dependent RAP1 gua 38.3 60 0.0021 27.6 6.2 46 78-127 364-409 (469)
251 1iyc_A Scarabaecin; antifungal 30.8 7.3 0.00025 21.5 -0.6 12 21-32 21-33 (36)
252 1tc3_C Protein (TC3 transposas 30.4 69 0.0024 17.3 4.1 28 168-195 20-47 (51)
253 3cf6_E RAP guanine nucleotide 27.1 1.1E+02 0.0037 28.3 6.2 47 77-127 58-104 (694)
254 4din_B CAMP-dependent protein 26.4 48 0.0017 27.8 3.5 48 75-127 153-200 (381)
255 1eyb_A Homogentisate 1,2-dioxy 24.9 57 0.0019 29.0 3.6 51 77-136 347-398 (471)
256 4f7z_A RAP guanine nucleotide 24.8 1E+02 0.0035 29.4 5.8 43 81-127 367-409 (999)
257 3esg_A HUTD, putative uncharac 23.7 2.6E+02 0.0088 21.7 7.1 32 94-134 143-174 (193)
258 2opw_A Phyhd1 protein; double- 21.0 67 0.0023 25.6 3.2 30 115-144 226-256 (291)
259 3p42_A Predicted protein; beta 20.8 96 0.0033 24.7 4.0 15 119-133 190-204 (236)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=100.00 E-value=1.3e-48 Score=317.45 Aligned_cols=190 Identities=42% Similarity=0.757 Sum_probs=178.3
Q ss_pred cCCCCCceeeecCCCCC-C--CCCCCCCCCCcccCceEEec-cccCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEE
Q 038563 6 SDPDPVNDFCVLNRSSA-T--TSLPCKNSSLVTVEDFVFSG-IKFRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADF 80 (198)
Q Consensus 6 ~d~~~~~d~cv~~~~~~-~--~g~~ck~~~~~~~~df~~~~-~~~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l 80 (198)
+||||||||||||++++ + ||+||| |+.++++||+|++ +.+++.+. +.|+.++.++...+|+++++++++.++++
T Consensus 1 ~~~~~~~d~c~~~~~~~~~~~~g~~c~-~~~~~~~df~~~~~~~~~~~~~~~~G~~v~~~~~~~~p~l~~~~~~~~~~~l 79 (201)
T 1fi2_A 1 TDPDPLQDFCVADLDGKAVSVNGHTCK-PMSEAGDDFLFSSKLTKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDF 79 (201)
T ss_dssp CCCCCSSSCCCBCCCTTSCCCSSCCBC-CGGGCCSCTTCCCTTSSCCCCCSTTSEEEEEESTTTCGGGTTSSCEEEEEEE
T ss_pred CCCcccceeEEecCCCCcccccCcccc-cCcccccceEEeeeecCCCCccCCCCcEEEEEecccCCCcccCceEEEEEEE
Confidence 59999999999999987 5 999999 9999999999998 88888766 88999999999999999999999999999
Q ss_pred eCCcEecceeCCCCCEEEEEEecEEEEEEEeCC---CeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCc
Q 038563 81 DVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ---NRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPG 157 (198)
Q Consensus 81 ~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~---~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg 157 (198)
+||++.++|||+++.|++||++|++++++++.+ ++.+.+.|++||+++||+|.+|++.|.|++++++++++++++|+
T Consensus 80 ~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~ 159 (201)
T 1fi2_A 80 APGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPG 159 (201)
T ss_dssp CTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGTTCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCC
T ss_pred CCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCCCeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCC
Confidence 999999999999889999999999999998765 67667899999999999999999999999999999999999999
Q ss_pred eeeechhhhcc--CCCHHHHHHHhCCCHHHHHHHhhhcCCC
Q 038563 158 LQKIPSAVFGS--NIKEELLEKAFGLTPKEIAKLRKRFAPH 196 (198)
Q Consensus 158 ~~~~~~~~f~~--~~p~~vla~af~v~~~~v~~l~~~~~~~ 196 (198)
.+.++.++|++ .+++++|+++|+++.+++++|+++|.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~~~~~~ 200 (201)
T 1fi2_A 160 IVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKSKFAGG 200 (201)
T ss_dssp CEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHHHSTTC
T ss_pred eEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHHhhcCC
Confidence 99999889984 3999999999999999999999999764
No 2
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=100.00 E-value=2.3e-33 Score=252.35 Aligned_cols=154 Identities=13% Similarity=0.213 Sum_probs=140.2
Q ss_pred eEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-e
Q 038563 39 FVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-R 115 (198)
Q Consensus 39 f~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~ 115 (198)
+.|+... ..+++- +.||+++.+++.+||+|++++||+++++|.||++++|||||+|+||+||++|++++++++++| +
T Consensus 287 ~~~Ni~~p~~~d~~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~~ 366 (466)
T 3kgl_A 287 CTDNLDDPSNADVYKPQLGYISTLNSYDLPILRFLRLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGDR 366 (466)
T ss_dssp CEEETTCGGGEEEEETTTEEEEEECTTTCTTHHHHTCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSCE
T ss_pred ccccccCcccCCcccCCCceEEEechhhCcccccCceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCcE
Confidence 4566543 344444 889999999999999999999999999999999999999999999999999999999999875 6
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHhhhc
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLRKRF 193 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~~~~ 193 (198)
++.++|++||+++||+|++|++ |.|++++.+++++++++|+.+.++ .+||+ .+|++||+++|+++.+++++|++..
T Consensus 367 ~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~-~lP~eVla~aF~v~~~~v~~Lk~~q 444 (466)
T 3kgl_A 367 VFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLR-GLPLEVISNGYQISLEEARRVKFNT 444 (466)
T ss_dssp EEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHhCcCHHHHHHHHhcc
Confidence 7889999999999999999998 789999999999999999999997 58998 7999999999999999999999864
Q ss_pred C
Q 038563 194 A 194 (198)
Q Consensus 194 ~ 194 (198)
.
T Consensus 445 ~ 445 (466)
T 3kgl_A 445 I 445 (466)
T ss_dssp C
T ss_pred C
Confidence 3
No 3
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=100.00 E-value=3.6e-32 Score=246.23 Aligned_cols=156 Identities=16% Similarity=0.236 Sum_probs=139.6
Q ss_pred cCceEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC
Q 038563 36 VEDFVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ 113 (198)
Q Consensus 36 ~~df~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~ 113 (198)
+..+.++... ..+++. +.||+++.+++.+||+|+++||++++++|.||++++|||||+|+||+||++|++++++++++
T Consensus 319 ~~~l~~Ni~~p~~~di~~~~gG~v~~v~~~~fP~L~~lgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~ 398 (496)
T 3ksc_A 319 TAKLRLNIGPSSSPDIYNPEAGRIKTVTSLDLPVLRWLKLSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCN 398 (496)
T ss_dssp SSCCEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTT
T ss_pred chhhhccccccccCCcccCCCeeEEEeCHHHCccccccceeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCC
Confidence 3445676542 334444 78999999999999999999999999999999999999999999999999999999999987
Q ss_pred C-eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHh
Q 038563 114 N-RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLR 190 (198)
Q Consensus 114 ~-~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~ 190 (198)
| +++.++|++||+++||+|++|++.|. ++++.+++++++++|+.+.++ .+||+ .+|++||+++|+++.+++++|+
T Consensus 399 g~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~-~~p~eVLa~aF~v~~~~v~~Lk 476 (496)
T 3ksc_A 399 GNTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVIN-NLPLDVVAATFNLQRNEARQLK 476 (496)
T ss_dssp SCEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTT-TSCHHHHHHHHTCCHHHHHHHH
T ss_pred CcEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhh-hCCHHHHHHHHCcCHHHHHHHH
Confidence 5 57788999999999999999998775 788999999999999999987 57998 8999999999999999999999
Q ss_pred hhc
Q 038563 191 KRF 193 (198)
Q Consensus 191 ~~~ 193 (198)
+..
T Consensus 477 ~~q 479 (496)
T 3ksc_A 477 SNN 479 (496)
T ss_dssp HSC
T ss_pred hcC
Confidence 854
No 4
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=100.00 E-value=4.2e-32 Score=244.14 Aligned_cols=156 Identities=14% Similarity=0.202 Sum_probs=140.0
Q ss_pred ceEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-
Q 038563 38 DFVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN- 114 (198)
Q Consensus 38 df~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~- 114 (198)
.+.++... ..+++. +.||+++.+++.+||+|+++|||+++++|.||++++|||||+|+||+||++|+++++|++++|
T Consensus 286 ~l~~ni~~p~~~dv~~~~gG~v~~~~~~~fP~L~~lgiS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g~ 365 (465)
T 3qac_A 286 RLAVNVDDPSKADVYTPEAGRLTTVNSFNLPILRHLRLSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQGQ 365 (465)
T ss_dssp CCEEETTCTTTCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC
T ss_pred eccccccccccCCcccCCCceEEEeCHHHCCCccccceeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCCc
Confidence 34455432 445555 889999999999999999999999999999999999999999999999999999999999875
Q ss_pred eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHhhh
Q 038563 115 RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLRKR 192 (198)
Q Consensus 115 ~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~~~ 192 (198)
+++.++|++||+++||+|++|++. .|++++.+++++++++|+.+.++ .+||+ .+|++||+++|++|.+++++|++.
T Consensus 366 ~~f~~~l~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~-~ip~eVla~aF~v~~e~v~~Lk~~ 443 (465)
T 3qac_A 366 SVFDEELSRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIR-SLPIDVVSNIYQISREEAFGLKFN 443 (465)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHH-HSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEEEEecCCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhh-hCCHHHHHHHhCCCHHHHHHHHhc
Confidence 678899999999999999999986 57889999999999999999997 68998 799999999999999999999986
Q ss_pred cCC
Q 038563 193 FAP 195 (198)
Q Consensus 193 ~~~ 195 (198)
...
T Consensus 444 ~~e 446 (465)
T 3qac_A 444 RPE 446 (465)
T ss_dssp CCS
T ss_pred cCc
Confidence 543
No 5
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.98 E-value=7e-32 Score=243.06 Aligned_cols=154 Identities=14% Similarity=0.192 Sum_probs=139.5
Q ss_pred eEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-e
Q 038563 39 FVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-R 115 (198)
Q Consensus 39 f~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~ 115 (198)
+.++... ..+++. +.||+++.+++.+||+|+++++++++++|.||++.+|||||+|+||+||++|++++++++++| +
T Consensus 286 l~~n~~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g~~ 365 (459)
T 2e9q_A 286 LKQNIGRSERADVFNPRGGRISTANYHTLPILRQVRLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFGQS 365 (459)
T ss_dssp CEEECSTTSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCE
T ss_pred eeecccccccCCcccCCCeeEEEeccccCccccccccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCCCE
Confidence 4444432 444544 889999999999999999999999999999999999999999999999999999999999875 5
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHhhhc
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLRKRF 193 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~~~~ 193 (198)
++..+|++||+++||+|++|++.| |++++.+++++++++|+.+.++ .+||+ .+|++||+++|+++.+++++|++..
T Consensus 366 ~~~~~l~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~-~~p~~Vla~af~v~~~~v~~l~~~~ 443 (459)
T 2e9q_A 366 VFDGEVREGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMR-MLPLGVLSNMYRISREEAQRLKYGQ 443 (459)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHH-HSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EEeeEEeCCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHH-hCCHHHHHHHHCcCHHHHHHHHhcC
Confidence 677789999999999999999999 7889999999999999999997 78998 7999999999999999999999875
Q ss_pred C
Q 038563 194 A 194 (198)
Q Consensus 194 ~ 194 (198)
.
T Consensus 444 ~ 444 (459)
T 2e9q_A 444 Q 444 (459)
T ss_dssp C
T ss_pred C
Confidence 3
No 6
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.97 E-value=2.5e-31 Score=241.04 Aligned_cols=157 Identities=16% Similarity=0.236 Sum_probs=137.4
Q ss_pred CceEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC
Q 038563 37 EDFVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN 114 (198)
Q Consensus 37 ~df~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 114 (198)
..+.|+... ..+++. +.||+++.+++.+||+|++++|++++++|.||++++|||||+|+||+||++|++++++++++|
T Consensus 356 ~rl~~Ni~~ps~~d~~n~~GG~v~~a~~~~fP~L~~LgiS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G 435 (531)
T 3fz3_A 356 LRLKENIGNPERADIFSPRAGRISTLNSHNLPILRFLRLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG 435 (531)
T ss_dssp CCCEEECCCGGGCSEEETTTEEEEEESTTTCTHHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS
T ss_pred ceeeeccCCcccCCcccCCCeEEEEeccccCCccccCceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC
Confidence 345777652 444555 889999999999999999999999999999999999999999999999999999999999876
Q ss_pred -eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHhh
Q 038563 115 -RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLRK 191 (198)
Q Consensus 115 -~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~~ 191 (198)
+++.++|++||+++||+|++|+.. .+++.+.+++..++++|++..++ .+||+ .+|++||+++|+++.+++++|++
T Consensus 436 ~~v~~~~L~~GDV~v~P~G~~H~~~-ag~e~l~flaF~ss~np~~~~LaG~~svf~-~lP~eVLa~aF~v~~e~v~kLk~ 513 (531)
T 3fz3_A 436 DAILDQEVQQGQLFIVPQNHGVIQQ-AGNQGFEYFAFKTEENAFINTLAGRTSFLR-ALPDEVLANAYQISREQARQLKY 513 (531)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSTTCHHH-HSCHHHHHHHHTCCHHHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCeEEEe-cCCCCEEEEEEecCCCCcceeccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHh
Confidence 678899999999999999999776 56667777644456899999997 78998 69999999999999999999998
Q ss_pred hcCC
Q 038563 192 RFAP 195 (198)
Q Consensus 192 ~~~~ 195 (198)
....
T Consensus 514 ~~~e 517 (531)
T 3fz3_A 514 NRQE 517 (531)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 7543
No 7
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.97 E-value=2.6e-30 Score=230.61 Aligned_cols=158 Identities=19% Similarity=0.236 Sum_probs=140.6
Q ss_pred ccCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC
Q 038563 35 TVEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN 114 (198)
Q Consensus 35 ~~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 114 (198)
....+.|++..+++.....+|+++.+++.+||+|+++++++++++|.||++.+||||++++|++||++|++++++++++|
T Consensus 211 ~~~~~~~~l~~~~p~~~~~~G~~~~~~~~~~P~L~~l~is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g 290 (416)
T 1uij_A 211 SSEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKE 290 (416)
T ss_dssp GCSSSCEETTSSCCSEECSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC-
T ss_pred CCcccceeccccCCCccCCCceEEEEChHHCccchhcCcceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCC
Confidence 34568888776655444778899999999999999999999999999999999999999999999999999999999876
Q ss_pred --------------eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeC-CCCceeeec---hhhhccCCCHHHHH
Q 038563 115 --------------RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDS-QNPGLQKIP---SAVFGSNIKEELLE 176 (198)
Q Consensus 115 --------------~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s-~~pg~~~~~---~~~f~~~~p~~vla 176 (198)
+.+..+|++||+++||+|++|++.|. +++.+++++++ ++|+.+.++ .+||+ .+|++||+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla 367 (416)
T 1uij_A 291 QQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVR-QIERQVQE 367 (416)
T ss_dssp -----------CCEEEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGG-GSCHHHHH
T ss_pred ccccccccccccceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHH-hCCHHHHH
Confidence 46778999999999999999999998 67999988865 489999887 68998 79999999
Q ss_pred HHhCCCHHHHHHHhhhcCC
Q 038563 177 KAFGLTPKEIAKLRKRFAP 195 (198)
Q Consensus 177 ~af~v~~~~v~~l~~~~~~ 195 (198)
++|+++.+++++|++....
T Consensus 368 ~af~~~~~~v~~l~~~~~~ 386 (416)
T 1uij_A 368 LAFPGSAQDVERLLKKQRE 386 (416)
T ss_dssp HHSSSCHHHHHHHTTSCCS
T ss_pred HHHCcCHHHHHHHHhcCCc
Confidence 9999999999999986543
No 8
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.97 E-value=6.4e-30 Score=232.32 Aligned_cols=155 Identities=17% Similarity=0.261 Sum_probs=139.0
Q ss_pred ceEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-
Q 038563 38 DFVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN- 114 (198)
Q Consensus 38 df~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~- 114 (198)
.+.++... ..+++. +.||+++.+++.+||+|+++++++++++|+||++.+||||++++|++||++|++++++++++|
T Consensus 335 ~l~~ni~~~~~~~~~~~~gG~v~~~~~~~fP~L~~l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~ 414 (510)
T 3c3v_A 335 TVKKNIGRNRSPDIYNPQAGSLKTANELNLLILRWLGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGN 414 (510)
T ss_dssp CCEEECSSCSCCSEEETTTEEEEEECTTTSTTHHHHTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSC
T ss_pred eeeeccCccccCCcccCCCeEEEEeccccCcccccceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCC
Confidence 34455432 344554 899999999999999999999999999999999999999999999999999999999998875
Q ss_pred eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHhhh
Q 038563 115 RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLRKR 192 (198)
Q Consensus 115 ~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~~~ 192 (198)
+++..+|++||+++||+|++|++.| +++++.+++++.+++|+...++ .+||+ .+|++||+++|+++.+++++|++.
T Consensus 415 ~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~-~lp~eVla~aF~v~~e~v~~L~~~ 492 (510)
T 3c3v_A 415 RVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVID-NLPEEVVANSYGLPREQARQLKNN 492 (510)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTT-TSCHHHHHHHHTCCHHHHHHHHHS
T ss_pred EEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHH-hCCHHHHHHHHCcCHHHHHHHHhh
Confidence 6677789999999999999999999 8888888888878899999997 78998 799999999999999999999987
Q ss_pred cC
Q 038563 193 FA 194 (198)
Q Consensus 193 ~~ 194 (198)
+.
T Consensus 493 ~~ 494 (510)
T 3c3v_A 493 NP 494 (510)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 9
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.97 E-value=3e-30 Score=231.89 Aligned_cols=157 Identities=18% Similarity=0.229 Sum_probs=136.9
Q ss_pred cCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-
Q 038563 36 VEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN- 114 (198)
Q Consensus 36 ~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~- 114 (198)
...+.|+...+++..++.+|+++.+++.+||+|+++|+++++++|.||++.+|||||+|+|++||++|+++++++++++
T Consensus 244 ~~~~~~~l~~~~p~~~~~~G~v~~~~~~~fP~L~~l~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~ 323 (445)
T 2cav_A 244 SQDKPFNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 323 (445)
T ss_dssp --CCCEETTSSCCSEESSSEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC---
T ss_pred CcccceeccccCCCccCCCceEEEeChHHCcccccCCCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCc
Confidence 3467788776665544889999999999999999999999999999999999999999999999999999999999874
Q ss_pred --------e--EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE-eCCCCceeeec---hhhhccCCCHHHHHHHhC
Q 038563 115 --------R--IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF-DSQNPGLQKIP---SAVFGSNIKEELLEKAFG 180 (198)
Q Consensus 115 --------~--~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~-~s~~pg~~~~~---~~~f~~~~p~~vla~af~ 180 (198)
+ ++..+|++||+++||+|++|++.|. +++.+++.. ++++|+.+.++ .++|+ .+|++||+++|+
T Consensus 324 ~~~~~~g~~~~~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla~af~ 400 (445)
T 2cav_A 324 QQQGLESMQLRRYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDLTFP 400 (445)
T ss_dssp --------CCEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGG-GSCHHHHHHHSS
T ss_pred ccccccCcceEEEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhh-hCCHHHHHHHHC
Confidence 3 6889999999999999999999998 467777655 45589999987 68998 799999999999
Q ss_pred CCHHHHHHHhhhcCC
Q 038563 181 LTPKEIAKLRKRFAP 195 (198)
Q Consensus 181 v~~~~v~~l~~~~~~ 195 (198)
+|.+++++|++....
T Consensus 401 v~~~~v~~l~~~~~e 415 (445)
T 2cav_A 401 GSGEEVEELLENQKE 415 (445)
T ss_dssp SCHHHHHHHHHHCCS
T ss_pred cCHHHHHHHHhcCCc
Confidence 999999999987643
No 10
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.97 E-value=9.3e-30 Score=230.23 Aligned_cols=154 Identities=16% Similarity=0.272 Sum_probs=138.5
Q ss_pred eEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-e
Q 038563 39 FVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-R 115 (198)
Q Consensus 39 f~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~ 115 (198)
+.++... ..+++. +.||+++.+++.++|+|+++++++++++|+||++.+|||||+++|++||++|++++++++++| +
T Consensus 302 l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~l~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G~~ 381 (476)
T 1fxz_A 302 LRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGER 381 (476)
T ss_dssp CEEECSSSSCCSEEETTTEEEEEECTTTSGGGTTTTCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTSCE
T ss_pred eeccccccccCCcccCCCeEEEEeccccCcccccCcceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCCCE
Confidence 4444432 344544 899999999999999999999999999999999999999999999999999999999998875 5
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeec--hhhhccCCCHHHHHHHhCCCHHHHHHHhhhc
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIP--SAVFGSNIKEELLEKAFGLTPKEIAKLRKRF 193 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~--~~~f~~~~p~~vla~af~v~~~~v~~l~~~~ 193 (198)
.+..+|++||+++||+|++|++.| |++++.+++++.+++|+...++ .+||+ .+|++||+++|+++++++++|++.+
T Consensus 382 ~~~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~-~~p~~Vla~af~~~~~~v~~l~~~~ 459 (476)
T 1fxz_A 382 VFDGELQEGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLN-ALPEEVIQHTFNLKSQQARQIKNNN 459 (476)
T ss_dssp EEEEEEETTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGG-GSCHHHHHHHHTCCHHHHHHHHHSC
T ss_pred EeeeEEcCCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHH-hCCHHHHHHHhCcCHHHHHHHHhhC
Confidence 667789999999999999999999 8889999998878899999997 78998 7999999999999999999999876
Q ss_pred C
Q 038563 194 A 194 (198)
Q Consensus 194 ~ 194 (198)
.
T Consensus 460 ~ 460 (476)
T 1fxz_A 460 P 460 (476)
T ss_dssp C
T ss_pred C
Confidence 4
No 11
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.97 E-value=7.1e-30 Score=228.86 Aligned_cols=157 Identities=19% Similarity=0.231 Sum_probs=139.4
Q ss_pred ccCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC
Q 038563 35 TVEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN 114 (198)
Q Consensus 35 ~~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 114 (198)
....+.|++..+++.....||+++.+++.++|+|+++++++++++|.||++.+|||||+++|++||++|+++++++++++
T Consensus 228 ~~~~~~~~l~~~~p~~~~~gG~v~~~~~~~~P~L~~l~is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g 307 (434)
T 2ea7_A 228 SSQDEPFNLRNSKPIYSNKFGRWYEMTPEKNPQLKDLDVFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSD 307 (434)
T ss_dssp TCSSSCEETTSSCCSEEETTEEEEEECTTTCHHHHHHTEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEE
T ss_pred CCcccceeeccCCCceeCCCcEEEEEChhhCccccccCcceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCc
Confidence 34567888776665544888999999999999999999999999999999999999999999999999999999998864
Q ss_pred -------------eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeC-CCCceeeec---hhhhccCCCHHHHHH
Q 038563 115 -------------RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDS-QNPGLQKIP---SAVFGSNIKEELLEK 177 (198)
Q Consensus 115 -------------~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s-~~pg~~~~~---~~~f~~~~p~~vla~ 177 (198)
+.+..+|++||+++||+|++|++.|. +++.+++++.+ ++++.+.++ .+||+ .+|++||++
T Consensus 308 ~~~~~~~~~~~~~r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~-~~p~~vla~ 384 (434)
T 2ea7_A 308 QQQQKQQEESLEVQRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMS-EIPTEVLEV 384 (434)
T ss_dssp CCCCTTSCCCEEEEEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGG-GSCHHHHHH
T ss_pred cccccccccCcceEEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhh-hCCHHHHHH
Confidence 36777999999999999999999998 57888887754 578999888 68998 799999999
Q ss_pred HhCCCHHHHHHHhhhcC
Q 038563 178 AFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 178 af~v~~~~v~~l~~~~~ 194 (198)
+|+++.+++++|++...
T Consensus 385 af~v~~~~v~~l~~~~~ 401 (434)
T 2ea7_A 385 SFPASGKKVEKLIKKQS 401 (434)
T ss_dssp HSSSCHHHHHHHHTTCC
T ss_pred HHCcCHHHHHHHHhcCC
Confidence 99999999999998654
No 12
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.97 E-value=1e-29 Score=230.66 Aligned_cols=155 Identities=20% Similarity=0.288 Sum_probs=139.7
Q ss_pred ceEEeccc-cCCCcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-
Q 038563 38 DFVFSGIK-FRGKFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN- 114 (198)
Q Consensus 38 df~~~~~~-~~~~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~- 114 (198)
.+.++... .++++. +.|++++.+++.+||+|+++++++++++|+||++.+||||++++|++||++|++++++++++|
T Consensus 330 ~l~~ni~~~~~~~~~~~~gG~v~~~~~~~~P~L~~lgls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~ 409 (493)
T 2d5f_A 330 KLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGN 409 (493)
T ss_dssp CCEEECCCGGGCSEEETTTEEEEEESTTTSTTHHHHTCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSC
T ss_pred eeeecccccCCCCcccCCCeEEEEeccccCccccccceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCC
Confidence 35566543 556665 899999999999999999999999999999999999999999999999999999999998874
Q ss_pred eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeechhhhccCCCHHHHHHHhCCCHHHHHHHhhhcC
Q 038563 115 RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 115 ~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~~~~f~~~~p~~vla~af~v~~~~v~~l~~~~~ 194 (198)
+++..+|++||+++||+|++|++.| +++++.+++++++++|+.+.+ .+||+ .+|++||+++|+++.+++++|++...
T Consensus 410 ~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~-~~p~eVla~aF~v~~~~v~~l~~~~~ 486 (493)
T 2d5f_A 410 AVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFR-AIPSEVLSNSYNLGQSQVRQLKYQGN 486 (493)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHH-HSCHHHHHHHHTCCHHHHHHHHHSSC
T ss_pred EEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHH-hCCHHHHHHHHCcCHHHHHHHHhcCC
Confidence 5566789999999999999999998 458899999999999999999 78998 69999999999999999999998764
Q ss_pred C
Q 038563 195 P 195 (198)
Q Consensus 195 ~ 195 (198)
.
T Consensus 487 e 487 (493)
T 2d5f_A 487 S 487 (493)
T ss_dssp S
T ss_pred C
Confidence 3
No 13
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.96 E-value=4.6e-29 Score=222.41 Aligned_cols=157 Identities=19% Similarity=0.206 Sum_probs=137.4
Q ss_pred CceEEeccccCCCcCCCCeEEEEEcccCC-CCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-
Q 038563 37 EDFVFSGIKFRGKFSETGLASIPVNVNVF-PGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN- 114 (198)
Q Consensus 37 ~df~~~~~~~~~~~~~~g~~v~~~~~~~~-P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~- 114 (198)
..+.|+...+++..+..+|+++.+++.++ |+|+++|+++++++|.||++.+|||||+|.|++||++|+++++++++++
T Consensus 226 ~~~~~nl~~~~p~~~n~~G~~~~~~~~~~~p~L~~~gis~~r~~l~pgg~~~PH~~p~A~ei~yV~~G~g~v~vv~~~~~ 305 (418)
T 3s7i_A 226 ITNPINLREGEPDLSNNFGKLFEVKPDKKNPQLQDLDMMLTCVEIKEGALMLPHFNSKAMVIVVVNKGTGNLELVAVRKE 305 (418)
T ss_dssp CCCCEETTCSCCSEEETTEEEEEECSBTTBHHHHHHTCEEEEEEECTTEEEEEEEESSCEEEEEEEECCEEEEEEEEEEC
T ss_pred CCcccccccCCCceeCCCCeEEEechHHcchhhccCCeeEEEEEecCCceeCceecCCCCEEEEEEeCeEEEEEEeCCCc
Confidence 37889988776654577888999999999 9999999999999999999999999999999999999999999998765
Q ss_pred ------------------------eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE-eCCCCceeeech---hhh
Q 038563 115 ------------------------RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF-DSQNPGLQKIPS---AVF 166 (198)
Q Consensus 115 ------------------------~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~-~s~~pg~~~~~~---~~f 166 (198)
+.+...|++||+++||+|++||+.|.+ ++.+++.. ++++|+.+.++. ++|
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv~ 383 (418)
T 3s7i_A 306 QQQRGRREEEEDEDEEEEGSNREVRRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNVI 383 (418)
T ss_dssp -------------------CCEEEEEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBHH
T ss_pred cccccccccccccccccccccccceEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhhh
Confidence 567899999999999999999999864 46666543 456899999985 688
Q ss_pred ccCCCHHHHHHHhCCCHHHHHHHhhhcCCC
Q 038563 167 GSNIKEELLEKAFGLTPKEIAKLRKRFAPH 196 (198)
Q Consensus 167 ~~~~p~~vla~af~v~~~~v~~l~~~~~~~ 196 (198)
+ ++|++||+++|++|.+++++|++....+
T Consensus 384 ~-~~~~evla~af~v~~~~v~~L~~~q~e~ 412 (418)
T 3s7i_A 384 D-QIEKQAKDLAFPGSGEQVEKLIKNQKES 412 (418)
T ss_dssp H-HSCHHHHHHHSSSCHHHHHHHHHTCCSC
T ss_pred h-cCCHHHHHHHhCCCHHHHHHHHhcCCcc
Confidence 7 8999999999999999999999875543
No 14
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.96 E-value=2.5e-28 Score=194.74 Aligned_cols=151 Identities=17% Similarity=0.250 Sum_probs=126.9
Q ss_pred CceEEeccccCCCcCCCCeEEEEEcc-----cCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 37 EDFVFSGIKFRGKFSETGLASIPVNV-----NVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 37 ~df~~~~~~~~~~~~~~g~~v~~~~~-----~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
+.|+|............||+++.++. ..+|+++ ++++.+++++||++.+|| |++++|++||++|++++++++
T Consensus 2 ~p~~f~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~ 78 (178)
T 1dgw_A 2 NPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLR--DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 78 (178)
T ss_dssp CTTEECGGGEEEEEEETTEEEEEECCTTSSCGGGGGGT--TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCceechhhcccceEcCCCEEEEEcccCCcchhcCCcC--cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEe
Confidence 45778866554333378999999887 6688877 689999999999999999 889999999999999999998
Q ss_pred CCCeEEEEEEeCCcEEEECCCCeeEEEecCCC-cEEEEEEE-eCCCCceeee---c-----hhhhccCCCHHHHHHHhCC
Q 038563 112 TQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDT-WATILGSF-DSQNPGLQKI---P-----SAVFGSNIKEELLEKAFGL 181 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~-~~~~~~~~-~s~~pg~~~~---~-----~~~f~~~~p~~vla~af~v 181 (198)
+++.. .+.|++||+++||+|.+|++.|.|++ ++++++++ ++++||.+.. + .+||+ ++|++||+++|++
T Consensus 79 ~~~~~-~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~-~~p~~vla~af~v 156 (178)
T 1dgw_A 79 PDGRD-TYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASYDS 156 (178)
T ss_dssp TTEEE-EEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHHTS
T ss_pred CCCcE-EEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhh-hCCHHHHHHHHCc
Confidence 76543 67999999999999999999999986 78888775 4567874433 2 47998 8999999999999
Q ss_pred CHHHHHHHhhh
Q 038563 182 TPKEIAKLRKR 192 (198)
Q Consensus 182 ~~~~v~~l~~~ 192 (198)
+.+++++|+..
T Consensus 157 ~~~~~~~l~~~ 167 (178)
T 1dgw_A 157 PYDEIEQTLLQ 167 (178)
T ss_dssp CHHHHHHHTTS
T ss_pred CHHHHHHHhcC
Confidence 99999999943
No 15
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.94 E-value=1.5e-26 Score=205.09 Aligned_cols=135 Identities=19% Similarity=0.216 Sum_probs=122.1
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeC------CC-eEEEEEEeCC
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDT------QN-RIFAKVIEKG 124 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~------~~-~~~~~~l~~G 124 (198)
..+|+++.+++.+ +++++++++|.||++.+||||++++|++||++|+++++++++ ++ +.+..+|++|
T Consensus 224 n~~G~~~~v~~~~------l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~~~~g~~~~~~~l~~G 297 (397)
T 2phl_A 224 NEFGNLTERTDNS------LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNKETLEYESYRAELSKD 297 (397)
T ss_dssp ETTEEEEEEEETT------TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC--CCSCEEEEEEEEETT
T ss_pred CCCCeEEEEeecc------CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccccCCCceEEEEEecCC
Confidence 7788899999877 799999999999999999999999999999999999999987 44 7889999999
Q ss_pred cEEEECCCCeeEEEecCCCcEEEEEEEe-CCCCceeeec---hhhhccCCC-----HHHHHHHhCCCHHHHHHHhhhcCC
Q 038563 125 EVMVFPRGLVHFQMNVGDTWATILGSFD-SQNPGLQKIP---SAVFGSNIK-----EELLEKAFGLTPKEIAKLRKRFAP 195 (198)
Q Consensus 125 d~~~iP~G~~H~~~N~g~~~~~~~~~~~-s~~pg~~~~~---~~~f~~~~p-----~~vla~af~v~~~~v~~l~~~~~~ 195 (198)
|+++||+|++|++.|.+ ++.++++.. +++|+.+.++ .++|+ .+| ++||+++|+++++++++|++....
T Consensus 298 DV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~-~~p~~~~~~eVla~af~v~~~~v~~l~~~~~e 374 (397)
T 2phl_A 298 DVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVIS-SIGRALDGKDVLGLTFSGSGDEVMKLINKQSG 374 (397)
T ss_dssp CEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHH-HHHTSTTHHHHHHHHSSSCHHHHHHHHTTCCC
T ss_pred CEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHh-hCCCccchHHHHHHHhCcCHHHHHHHHhcCCc
Confidence 99999999999999986 788877665 4589999888 78998 688 999999999999999999987543
No 16
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.94 E-value=2.9e-25 Score=193.22 Aligned_cols=159 Identities=18% Similarity=0.220 Sum_probs=141.0
Q ss_pred CCcccCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 32 SLVTVEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 32 ~~~~~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
.....++|+|+.+..++.....|+.++.+....+|+++ ++++.+++++||+..++|||+++.|++||++|++++.+++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~ 272 (361)
T 2vqa_A 195 TAKIEVPHTHNLLGQQPLVSLGGNELRLASAKEFPGSF--NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFA 272 (361)
T ss_dssp CCBCCSCCEEECTTSCCSEEETTEEEEEECTTTCTTST--TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEEC
T ss_pred CCCCCcceEeccccCCCcccCCCceEEEEehhhCcCcc--cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEc
Confidence 34567899998876665323789999999999999887 5788899999999999999998899999999999999988
Q ss_pred CCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeechhhhccCCCHHHHHHHhCCCHHHHHHHhh
Q 038563 112 TQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFGLTPKEIAKLRK 191 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~~~~f~~~~p~~vla~af~v~~~~v~~l~~ 191 (198)
++|+.....|++||+++||+|..|++.|.|++++.+++++++.+++.+.++ +|++ .+|++||+++|+++++++++|++
T Consensus 273 ~~g~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~-~~~~-~~~~~vl~~~f~~~~~~~~~l~~ 350 (361)
T 2vqa_A 273 SEGKASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLS-TWLA-SNPSSVLGNTFQISPELTKKLPV 350 (361)
T ss_dssp STTCEEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHH-HHHH-TSCHHHHHHHHTCCHHHHTTSCC
T ss_pred CCCcEEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHH-HHhh-hCCHHHHHHHHCcCHHHHHhhhc
Confidence 778756789999999999999999999999999999999999899988888 4887 89999999999999999999987
Q ss_pred hcC
Q 038563 192 RFA 194 (198)
Q Consensus 192 ~~~ 194 (198)
...
T Consensus 351 ~~~ 353 (361)
T 2vqa_A 351 QDT 353 (361)
T ss_dssp SCC
T ss_pred cCC
Confidence 654
No 17
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.93 E-value=3.8e-25 Score=198.74 Aligned_cols=155 Identities=17% Similarity=0.226 Sum_probs=127.7
Q ss_pred ccCceEEeccccCCCcCCCCeEEEEEcc--cCCCCccccc-eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 35 TVEDFVFSGIKFRGKFSETGLASIPVNV--NVFPGLNTLG-MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 35 ~~~df~~~~~~~~~~~~~~g~~v~~~~~--~~~P~l~~~g-ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
..+.|+|............+|++..++. ...|.+++++ +++++++++||++.+|| |++++|++||++|++++++++
T Consensus 45 ~~~p~vf~~~~~~~~i~~e~G~i~~l~~~~~~~~~l~~~g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 123 (445)
T 2cav_A 45 QNNPYLFRSNKFLTLFKNQHGSLRLLQRFNEDTEKLENLRDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVN 123 (445)
T ss_dssp -CCTTEECGGGEEEEEEETTEEEEEECCTTSSCSTTGGGTTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEE
T ss_pred CCCCeEEchhhcCceEEcCCEEEEEEeccCcccccccccCcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEe
Confidence 3456777754332122256888888754 4556888887 99999999999999999 668999999999999999998
Q ss_pred CCCeEEEEEEeCCcEEEECCCCeeEEEecC-CCcEEEEEEEe-CCCCcee---eec-----hhhhccCCCHHHHHHHhCC
Q 038563 112 TQNRIFAKVIEKGEVMVFPRGLVHFQMNVG-DTWATILGSFD-SQNPGLQ---KIP-----SAVFGSNIKEELLEKAFGL 181 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g-~~~~~~~~~~~-s~~pg~~---~~~-----~~~f~~~~p~~vla~af~v 181 (198)
++++ +.+.|++||+++||+|..||++|.| +++++++++++ +++||.+ .++ .+||+ ++|++||+++|++
T Consensus 124 ~~~~-~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~-~~~~~vLa~af~v 201 (445)
T 2cav_A 124 PDGR-DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLS-AFSKNFLEASYDS 201 (445)
T ss_dssp TTEE-EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGG-GSCHHHHHHHHTS
T ss_pred CCCC-EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhh-cCCHHHHHHHhCC
Confidence 8665 6789999999999999999999999 89999999998 5567633 344 37998 8999999999999
Q ss_pred CHHHHHHHhhh
Q 038563 182 TPKEIAKLRKR 192 (198)
Q Consensus 182 ~~~~v~~l~~~ 192 (198)
+.+++++|++.
T Consensus 202 ~~~~v~~l~~~ 212 (445)
T 2cav_A 202 PYDEIEQTLLQ 212 (445)
T ss_dssp CHHHHHHHTTS
T ss_pred CHHHHHhhhcc
Confidence 99999999853
No 18
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.93 E-value=4.7e-25 Score=197.59 Aligned_cols=152 Identities=20% Similarity=0.254 Sum_probs=126.5
Q ss_pred cCceEEeccc-cCCCcCCCCeEEEEEcc--cCCCCccccc-eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 36 VEDFVFSGIK-FRGKFSETGLASIPVNV--NVFPGLNTLG-MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 36 ~~df~~~~~~-~~~~~~~~g~~v~~~~~--~~~P~l~~~g-ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
.+.|.|+... ........+|+++.+.. .+.+.|++++ +++++++|+||++++|| |++++|++||++|++++++++
T Consensus 20 ~~p~~f~~~~~~~~~~~se~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~ 98 (434)
T 2ea7_A 20 NNPFYFNSDRWFRTLYRNEWGHIRVLQRFDQRSKQMQNLENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVN 98 (434)
T ss_dssp GCTTEECTTTSEEEEEEETTEEEEEECCSTTTCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred CCCeEEeccccccceEEcCCEEEEEEeccCCcccccCccccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEe
Confidence 4567777443 22222267899998743 5568899888 99999999999999999 779999999999999999997
Q ss_pred CCCeEEEEEEeCCcEEEECCCCeeEEEecC-CCcEEEEEEEe-CCCCcee---eech-----hhhccCCCHHHHHHHhCC
Q 038563 112 TQNRIFAKVIEKGEVMVFPRGLVHFQMNVG-DTWATILGSFD-SQNPGLQ---KIPS-----AVFGSNIKEELLEKAFGL 181 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g-~~~~~~~~~~~-s~~pg~~---~~~~-----~~f~~~~p~~vla~af~v 181 (198)
+ ++.+.+.|++||+++||+|.+||++|.| +++++++++++ +.+||.+ .++. +||+ ++|++||+++|++
T Consensus 99 ~-~~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af~v 176 (434)
T 2ea7_A 99 P-DSRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLR-GFSKNILEASFDS 176 (434)
T ss_dssp S-SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGG-GSCHHHHHHHHTS
T ss_pred C-CCCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhh-cCCHHHHHHHhCC
Confidence 6 4456789999999999999999999998 88999999885 5667533 4543 4998 8999999999999
Q ss_pred CHHHHHHHh
Q 038563 182 TPKEIAKLR 190 (198)
Q Consensus 182 ~~~~v~~l~ 190 (198)
|.+++++|+
T Consensus 177 ~~~~v~~l~ 185 (434)
T 2ea7_A 177 DFKEINRVL 185 (434)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHhhh
Confidence 999999999
No 19
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.93 E-value=4e-25 Score=199.10 Aligned_cols=140 Identities=19% Similarity=0.302 Sum_probs=121.0
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EE-------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IF------------- 117 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~------------- 117 (198)
..+|.+..++ ...|.|+++|++++|++|+||++++|||| +++|++||++|++.+++++++++ .|
T Consensus 43 se~G~~~~~~-~~~~~l~~~gvs~~r~~i~pggl~~Ph~h-~a~ei~yVl~G~g~vg~v~p~~~~tf~~~~~~~~~~~~~ 120 (459)
T 2e9q_A 43 AEAGFTEVWD-QDNDEFQCAGVNMIRHTIRPKGLLLPGFS-NAPKLIFVAQGFGIRGIAIPGCAETYQTDLRRSQSAGSA 120 (459)
T ss_dssp ETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEECCTTCCCCEEECCC-------C
T ss_pred cCCcEEEecC-CCChhhccCceEEEEEEEcCCCEecceec-CCceEEEEEeeEEEEEEEeCCCcchhccchhhccccccc
Confidence 6677776655 56699999999999999999999999999 59999999999999999987642 12
Q ss_pred -------EEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCC--------Cceeeec--------------------
Q 038563 118 -------AKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQN--------PGLQKIP-------------------- 162 (198)
Q Consensus 118 -------~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~--------pg~~~~~-------------------- 162 (198)
.+.|++||+++||+|++||++|.|++++++++++++.+ +..+.++
T Consensus 121 ~~d~~q~~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~ 200 (459)
T 2e9q_A 121 FKDQHQKIRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKG 200 (459)
T ss_dssp CCEEECCCEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC--------
T ss_pred cccccceeEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhccccccccc
Confidence 46899999999999999999999999999999998655 3344444
Q ss_pred ------hhhhccCCCHHHHHHHhCCCHHHHHHHhhhcC
Q 038563 163 ------SAVFGSNIKEELLEKAFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 163 ------~~~f~~~~p~~vla~af~v~~~~v~~l~~~~~ 194 (198)
.++|+ +++++||+++|+++.+++++|++...
T Consensus 201 ~~~~~~~nif~-gf~~evLa~aF~v~~~~v~kL~~~~~ 237 (459)
T 2e9q_A 201 SSGEKSGNIFS-GFADEFLEEAFQIDGGLVRKLKGEDD 237 (459)
T ss_dssp ----CCCCTTT-TSCHHHHHHHHTCCHHHHHHHHTTTC
T ss_pred cccccccchhh-cCCHHHHHhhcCCCHHHHHhhhhccc
Confidence 37998 89999999999999999999997654
No 20
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.93 E-value=3.7e-25 Score=197.38 Aligned_cols=154 Identities=18% Similarity=0.238 Sum_probs=126.1
Q ss_pred cCceEEe-ccccCCCcCCCCeEEEEEcc--cCCCCccccc-eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 36 VEDFVFS-GIKFRGKFSETGLASIPVNV--NVFPGLNTLG-MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 36 ~~df~~~-~~~~~~~~~~~g~~v~~~~~--~~~P~l~~~g-ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
.+.|+|+ ...........+|+++.+.. ...+.+++++ +++++++++||++++|| |++++|++||++|++++++++
T Consensus 8 ~~p~~f~~~~~~~~~~~~e~G~ir~l~~~~~~~~~l~~~~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~ 86 (416)
T 1uij_A 8 NNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVN 86 (416)
T ss_dssp SCTTEECGGGSEEEEEECSSEEEEEECCHHHHCGGGGGGTTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEEC
T ss_pred CCCeEecccccccceEEcCCEEEEEEeccCCccccccCcccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEE
Confidence 4567776 32222111267899988743 3447888887 99999999999999999 668999999999999999998
Q ss_pred CCCeEEEEEEeCCcEEEECCCCeeEEEecC-CCcEEEEEEEe-CCCCcee---eech-----hhhccCCCHHHHHHHhCC
Q 038563 112 TQNRIFAKVIEKGEVMVFPRGLVHFQMNVG-DTWATILGSFD-SQNPGLQ---KIPS-----AVFGSNIKEELLEKAFGL 181 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g-~~~~~~~~~~~-s~~pg~~---~~~~-----~~f~~~~p~~vla~af~v 181 (198)
+ ++..++.|++||+++||+|.+||+.|.| +++++++++++ +.+||.+ .++. +||+ ++|++||+++|++
T Consensus 87 ~-~~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~-~~~~~vLa~af~v 164 (416)
T 1uij_A 87 N-DDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQ-GFSHNILETSFHS 164 (416)
T ss_dssp S-SCEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGG-GSCHHHHHHHHTS
T ss_pred C-CCCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhh-cCCHHHHHHHhCc
Confidence 7 5556789999999999999999999995 99999999986 5667643 3442 4998 8999999999999
Q ss_pred CHHHHHHHh-hh
Q 038563 182 TPKEIAKLR-KR 192 (198)
Q Consensus 182 ~~~~v~~l~-~~ 192 (198)
|.+++++|+ +.
T Consensus 165 ~~~~v~~l~~~~ 176 (416)
T 1uij_A 165 EFEEINRVLFGE 176 (416)
T ss_dssp CHHHHHHHHTCT
T ss_pred CHHHHHhhhhcc
Confidence 999999999 44
No 21
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.93 E-value=6.5e-25 Score=194.53 Aligned_cols=152 Identities=16% Similarity=0.139 Sum_probs=127.3
Q ss_pred cCceEEeccc-cCCCcCCCCeEEEEE--cccCCCCccccc-eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 36 VEDFVFSGIK-FRGKFSETGLASIPV--NVNVFPGLNTLG-MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 36 ~~df~~~~~~-~~~~~~~~g~~v~~~--~~~~~P~l~~~g-ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
.+.|+|.... ........+|.++.+ .....|.|++++ +++++++++||++.+|||| +++|++||++|++++++++
T Consensus 11 ~~p~~f~~~~~~~~~~~~e~G~i~~l~~~~~~~~~l~~~~~~s~~~~~l~pgg~~~ph~~-~a~ei~yVl~G~~~v~~v~ 89 (397)
T 2phl_A 11 DNPFYFNSDNSWNTLFKNQYGHIRVLQRFDQQSKRLQNLEDYRLVEFRSKPETLLLPQQA-DAELLLVVRSGSAILVLVK 89 (397)
T ss_dssp CCTTEECGGGTEEEEEEETTEEEEEECCHHHHCGGGGGGTTCEEEEEEECSSEEEEEEEE-SEEEEEEEEESEEEEEEEE
T ss_pred CCCcEeccchhccceEEcCCEEEEEecccCCCChhhcccccEEEEEEEECCCcCccCEec-CCCeEEEEEeeeEEEEEEe
Confidence 3557776433 221112778999887 445668999998 9999999999999999999 7999999999999999999
Q ss_pred CCCeEEEEEEeCCcE------EEECCCCeeEEEecC-CCcEEEEEEEeCCC-C--ceeeec-----hhhhccCCCHHHHH
Q 038563 112 TQNRIFAKVIEKGEV------MVFPRGLVHFQMNVG-DTWATILGSFDSQN-P--GLQKIP-----SAVFGSNIKEELLE 176 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~------~~iP~G~~H~~~N~g-~~~~~~~~~~~s~~-p--g~~~~~-----~~~f~~~~p~~vla 176 (198)
++++ .+++|++||+ ++||+|++||+.|.| ++++++++++++.+ | ..+.++ .+||+ ++|++||+
T Consensus 90 ~~~~-~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~-~~~~~vLa 167 (397)
T 2phl_A 90 PDDR-REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQ-EFSKHILE 167 (397)
T ss_dssp TTTE-EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGG-GSCHHHHH
T ss_pred CCCc-EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhh-cCCHHHHH
Confidence 8776 4789999999 999999999999999 88999999987543 4 334443 25887 89999999
Q ss_pred HHhCCCHHHHHHHh
Q 038563 177 KAFGLTPKEIAKLR 190 (198)
Q Consensus 177 ~af~v~~~~v~~l~ 190 (198)
++|+++.+++++|+
T Consensus 168 ~af~v~~~~v~~l~ 181 (397)
T 2phl_A 168 ASFNSKFEEINRVL 181 (397)
T ss_dssp HHHTSCHHHHHHHH
T ss_pred HHhCCCHHHHHhhh
Confidence 99999999999999
No 22
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.92 E-value=1.6e-24 Score=195.92 Aligned_cols=140 Identities=15% Similarity=0.210 Sum_probs=119.8
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeE---------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRI--------------- 116 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~--------------- 116 (198)
..+|.+..++ ...|.|+++|++++|++|+||++.+||||+ +.|++||++|++.+++++++++.
T Consensus 28 se~G~~e~~~-~~~~~l~~~gvs~~r~~l~Pggl~~Ph~~~-a~ei~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~ 105 (476)
T 1fxz_A 28 SEGGLIETWN-PNNKPFQCAGVALSRCTLNRNALRRPSYTN-GPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSS 105 (476)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEES-SCEEEEEEECCEEEEEECTTCCCC--------------
T ss_pred cCCceEEeeC-CCChhhccCceEEEEEEEcCCCEecceecC-CceEEEEEecEEEEEEEcCCCcchhhcccccccccccc
Confidence 6777777766 555999999999999999999999999995 89999999999999999876431
Q ss_pred -------EEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCC--------ceeeec-------------------
Q 038563 117 -------FAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNP--------GLQKIP------------------- 162 (198)
Q Consensus 117 -------~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~p--------g~~~~~------------------- 162 (198)
..+.|++||+++||+|++||++|.|++++++++++++.++ ..+.++
T Consensus 106 ~~~d~~qk~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ 185 (476)
T 1fxz_A 106 RPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQS 185 (476)
T ss_dssp ----CCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC-------
T ss_pred ccccccceEEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccccc
Confidence 2578999999999999999999999999999999985553 344443
Q ss_pred -------------hhhhccCCCHHHHHHHhCCCHHHHHHHhhhcC
Q 038563 163 -------------SAVFGSNIKEELLEKAFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 163 -------------~~~f~~~~p~~vla~af~v~~~~v~~l~~~~~ 194 (198)
.+||+ +|+++||+++|+++.+++++|++...
T Consensus 186 ~~~~~~~~~~~~~~~if~-gf~~~vLa~af~v~~~~~~kl~~~~~ 229 (476)
T 1fxz_A 186 QKGKHQQEEENEGGSILS-GFTLEFLEHAFSVDKQIAKNLQGENE 229 (476)
T ss_dssp ------------CCCGGG-GSCHHHHHHHHTCCHHHHHHHSCC--
T ss_pred cccccccccccccchhhh-cCCHHHHHhhhCCCHHHHHhhhcccc
Confidence 36997 89999999999999999999986543
No 23
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.92 E-value=4.2e-24 Score=190.46 Aligned_cols=135 Identities=19% Similarity=0.266 Sum_probs=112.7
Q ss_pred CCCeEEEEEc-----ccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcE
Q 038563 52 ETGLASIPVN-----VNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEV 126 (198)
Q Consensus 52 ~~g~~v~~~~-----~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~ 126 (198)
...|.++.+. +..+|+|+ ++++++++++|+++.+|| |++|+|++||++|+++++++++++ .+.+.|++||+
T Consensus 20 se~G~i~~l~~f~~~s~~l~~l~--~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~~~~-~~~~~l~~GDv 95 (418)
T 3s7i_A 20 NQNGRIRVLQRFDQRSRQFQNLQ--NHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVANGNN-RKSFNLDEGHA 95 (418)
T ss_dssp CSSEEEEEECCHHHHCGGGGGGT--TCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEECSSC-EEEEEEETTEE
T ss_pred cCCcEEEEecccCCcchhccccc--ceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEecCC-EEEEEecCCCE
Confidence 6788898884 34666666 567778899999999999 889999999999999999999854 45799999999
Q ss_pred EEECCCCeeEEEecCCC-cEEEEE-EEeCCCCceeeec--------hhhhccCCCHHHHHHHhCCCHHHHHHHhh
Q 038563 127 MVFPRGLVHFQMNVGDT-WATILG-SFDSQNPGLQKIP--------SAVFGSNIKEELLEKAFGLTPKEIAKLRK 191 (198)
Q Consensus 127 ~~iP~G~~H~~~N~g~~-~~~~~~-~~~s~~pg~~~~~--------~~~f~~~~p~~vla~af~v~~~~v~~l~~ 191 (198)
++||+|++||+.|.|.. .+.+++ .+++++||.+... .++|+ ++|++||+++|+++.+++++|+.
T Consensus 96 ~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~-gf~~evLa~af~v~~~~v~kl~~ 169 (418)
T 3s7i_A 96 LRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQ-GFSRNTLEAAFNAEFNEIRRVLL 169 (418)
T ss_dssp EEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGG-GSCHHHHHHHHTSCHHHHHHHTT
T ss_pred EEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhh-cCCHHHHHHHHCcCHHHHHhhhc
Confidence 99999999999998765 555554 3566778764431 25887 89999999999999999999984
No 24
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.91 E-value=3.5e-24 Score=192.67 Aligned_cols=138 Identities=20% Similarity=0.379 Sum_probs=120.7
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC-CeEE-------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ-NRIF------------- 117 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~------------- 117 (198)
..||.+..++... +.|+++|++++|++++||++.+|||| ++.|++||++|++.++++.++ .+.|
T Consensus 30 se~G~~e~~d~~~-~~l~~~gvs~~R~~i~P~gl~~Ph~h-~a~ei~yV~qG~g~~g~v~pgc~etf~~~~~~~~~~~~~ 107 (465)
T 3qac_A 30 AERGLTEVWDSNE-QEFRCAGVSVIRRTIEPHGLLLPSFT-SAPELIYIEQGNGITGMMIPGCPETYESGSQQFQGGEDE 107 (465)
T ss_dssp ETTEEEEECCTTS-HHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECEEEEEEECTTCCCCC-------------
T ss_pred CCCcEEEEECCCC-hhhcccceEEEEEEEcCCcCcccEEc-CCCEEEEEEECcEEEEEecCCCCceeecchhcccccccc
Confidence 6788888888544 68999999999999999999999999 899999999999999999764 2322
Q ss_pred -----------------------EEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCC---------Cceeeec---
Q 038563 118 -----------------------AKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQN---------PGLQKIP--- 162 (198)
Q Consensus 118 -----------------------~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~---------pg~~~~~--- 162 (198)
.+.+++||+++||+|+.||++|.|++++++++++++.+ +..+.++
T Consensus 108 ~~~~~~~~~~~~~~~~~~d~hqk~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~ 187 (465)
T 3qac_A 108 RIREQGSRKFGMRGDRFQDQHQKIRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKP 187 (465)
T ss_dssp -----------------CCCCCCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCC
T ss_pred ccccccccccccccccccccccceeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCC
Confidence 45899999999999999999999999999999998754 3445554
Q ss_pred ---------------------hhhhccCCCHHHHHHHhCCCHHHHHHHhhh
Q 038563 163 ---------------------SAVFGSNIKEELLEKAFGLTPKEIAKLRKR 192 (198)
Q Consensus 163 ---------------------~~~f~~~~p~~vla~af~v~~~~v~~l~~~ 192 (198)
.++|+ +|++++|++||+++.+++++|++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 188 QQEHSGEHQFSRESRRGERNTGNIFR-GFETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp CCSCC--------------CCCCGGG-GSCHHHHHHHHTCCHHHHHHHHTT
T ss_pred ccccccccccccccccccccccchhh-cCCHHHHHHHhCCCHHHHHHhhhc
Confidence 36998 999999999999999999999865
No 25
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.91 E-value=9.4e-24 Score=191.20 Aligned_cols=136 Identities=20% Similarity=0.331 Sum_probs=118.2
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC-CeEE-------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ-NRIF------------- 117 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~------------- 117 (198)
..+|.+..++ ...|+|+++|++++|+++.||++.+||+| +++|++||++|++.++++.++ .+.+
T Consensus 26 se~G~~e~~~-~~~~~L~~~gvs~~R~~i~pggl~lPh~~-~A~ei~~V~qG~g~~G~v~p~~~e~f~~~~~~~~~~~~~ 103 (496)
T 3ksc_A 26 SEGGLIETWN-PNNKQFRCAGVALSRATLQRNALRRPYYS-NAPQEIFIQQGNGYFGMVFPGCPETFEEPQESEQGEGRR 103 (496)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEEE-SSCEEEEEEECCEEEEEECTTCCCC--------------
T ss_pred CCCcEEEecc-ccchhhccCCceEEEEEecCCCEeCceEc-CCCEEEEEEeCceEEEEEeCCCCccchhhhhcccccccc
Confidence 5677666665 78899999999999999999999999999 899999999999999999875 2333
Q ss_pred -------EEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCc--------eeeec--------------------
Q 038563 118 -------AKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPG--------LQKIP-------------------- 162 (198)
Q Consensus 118 -------~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg--------~~~~~-------------------- 162 (198)
.+.|++||+++||+|++||+.|.|+++++++++|+..++. .+.++
T Consensus 104 ~~d~~qk~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~ 183 (496)
T 3ksc_A 104 YRDRHQKVNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQ 183 (496)
T ss_dssp -CCCCCCEEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC--------
T ss_pred cccchheeeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccc
Confidence 3599999999999999999999999999999999765532 23333
Q ss_pred ----hhhhccCCCHHHHHHHhCCCHHHHHHHh
Q 038563 163 ----SAVFGSNIKEELLEKAFGLTPKEIAKLR 190 (198)
Q Consensus 163 ----~~~f~~~~p~~vla~af~v~~~~v~~l~ 190 (198)
.++|+ +|+.++|+.||+++.+++++|.
T Consensus 184 ~~~~~ni~s-gF~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 184 ENEGNNIFS-GFKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp ---CCSGGG-GSCHHHHHHHHTCCHHHHHHHT
T ss_pred cccCCCchh-hcCHHHHHHHHCCCHHHHHHHH
Confidence 36887 9999999999999999999998
No 26
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.90 E-value=1.6e-22 Score=175.88 Aligned_cols=150 Identities=23% Similarity=0.331 Sum_probs=130.0
Q ss_pred ceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEE
Q 038563 38 DFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIF 117 (198)
Q Consensus 38 df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~ 117 (198)
.|.|+....+... ..||+++.++...+|.+. ++++.++++.||+..++|||+++.|++||++|++++++++++|+..
T Consensus 20 ~~~~~~~~~~~~~-~~~G~~~~~~~~~~p~~~--~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~~~ 96 (361)
T 2vqa_A 20 AFTYAFSKTPLVL-YDGGTTKQVGTYNFPVSK--GMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGKVE 96 (361)
T ss_dssp CSEECGGGSCCEE-ETTEEEEEESTTTCTTCC--SCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSCEE
T ss_pred ceEEEcccCCcee-cCCceEEEeChhhCcccc--ceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCcEE
Confidence 4888876555333 679999999999999987 5689999999999999999988999999999999999998877544
Q ss_pred EEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCc---eeeechhhhccCCCHHHHHHHhCCCHHHHHHHhhh
Q 038563 118 AKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPG---LQKIPSAVFGSNIKEELLEKAFGLTPKEIAKLRKR 192 (198)
Q Consensus 118 ~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg---~~~~~~~~f~~~~p~~vla~af~v~~~~v~~l~~~ 192 (198)
...|++||+++||+|.+|++.|.++++++++++++..++. .+... ++|+ ++|.++|+++|+++.+.++++++.
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~-~~~~-~~p~~vLa~~~~v~~~~~~~l~~~ 172 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVT-DWLS-HTPIAWVEENLGWTAAQVAQLPKK 172 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHH-HHHH-TSCHHHHHHHHTCCHHHHTTSCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHh-HHHH-hCCHHHHHHHhCcCHHHHHhcccc
Confidence 6899999999999999999999999999999999877654 34444 6888 899999999999999999988754
No 27
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.89 E-value=1.1e-22 Score=184.74 Aligned_cols=140 Identities=21% Similarity=0.367 Sum_probs=117.9
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-----------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN----------------- 114 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~----------------- 114 (198)
..||.+..++ ...|.|+++|+++++++|.||++.+||||+ +.|++||++|++.++++.++.
T Consensus 25 se~G~~e~~~-~~~~~l~~~gv~~~r~~i~pggl~~Ph~~~-~~~i~yV~~G~g~vg~v~pgc~et~~~~~~~~~~~~~~ 102 (493)
T 2d5f_A 25 SEGGLIETWN-SQHPELQCAGVTVSKRTLNRNGLHLPSYSP-YPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSR 102 (493)
T ss_dssp CSSEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECEEEEEECCTTCCCCEEECC---------
T ss_pred cCCcEEEEeC-CCChhhccCCEEEEEEEeCCCcEeCceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 5677666655 566999999999999999999999999995 789999999999999996541
Q ss_pred e--------EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCC--------ceeeec----------------
Q 038563 115 R--------IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNP--------GLQKIP---------------- 162 (198)
Q Consensus 115 ~--------~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~p--------g~~~~~---------------- 162 (198)
+ ...+.|++||+++||+|++||++|.|+++++++++++..+. ..+.++
T Consensus 103 ~~~~~~d~~qkv~~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~ 182 (493)
T 2d5f_A 103 SQQQLQDSHQKIRHFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQ 182 (493)
T ss_dssp ----CSEEESCEEEEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC----
T ss_pred cccccccccceEEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhccc
Confidence 0 02458999999999999999999999999999999984432 334444
Q ss_pred -------------------hhhhccCCCHHHHHHHhCCCHHHHHHHhhhcC
Q 038563 163 -------------------SAVFGSNIKEELLEKAFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 163 -------------------~~~f~~~~p~~vla~af~v~~~~v~~l~~~~~ 194 (198)
.+||+ +|++++|++||+++.+++++|+....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~nif~-gf~~e~La~aF~v~~~~v~kl~~~~~ 232 (493)
T 2d5f_A 183 QKSHGGRKQGQHQQQEEEGGSVLS-GFSKHFLAQSFNTNEDTAEKLRSPDD 232 (493)
T ss_dssp -----------------CCCCGGG-GSCHHHHHHHTTCCHHHHHHTTCTTC
T ss_pred ccccccccccccccccccccchhh-cCCHHHHHhHhCCCHHHHHHhhhccc
Confidence 36897 89999999999999999999987654
No 28
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.89 E-value=7.3e-23 Score=184.15 Aligned_cols=139 Identities=19% Similarity=0.293 Sum_probs=119.9
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-eEE-------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-RIF------------- 117 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~------------- 117 (198)
..+|.+..++... |+|+++|++++|+++.|+++++||+|+ ++|++||++|++.++++.+.- +.+
T Consensus 23 se~G~~e~w~~~~-~~L~~~gvs~~r~~i~p~Gl~lPh~~~-a~e~~~V~~G~g~~G~v~pgc~et~~~~~~~~~~~~~~ 100 (466)
T 3kgl_A 23 AEAGRIEVWDHHA-PQLRCSGVSFVRYIIESKGLYLPSFFS-TAKLSFVAKGEGLMGRVVPGCAETFQDSSVFQPGGGSP 100 (466)
T ss_dssp ETTEEEEECCTTS-HHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEEECTTCCCCEEECCSSCCCC---
T ss_pred CCCcEEEEECCCC-hhhccCCeEEEEEEECCCCEeCCeeCC-CCeEEEEEeCeEEEEEecCCCcchhhcccccccccccc
Confidence 6788888888665 999999999999999999999999996 999999999999999997631 111
Q ss_pred ---------------------------------------------EEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 118 ---------------------------------------------AKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 118 ---------------------------------------------~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
...|++||+++||+|.+||+.|.|+++++++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d 180 (466)
T 3kgl_A 101 FGEGQGQGQQGQGQGHQGQGQGQQGQQGQQGQQSQGQGFRDMHQKVEHIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLD 180 (466)
T ss_dssp --------------------------------------CCEEESCEEEEETTEEEEECTTCEEEEECCSSSCEEEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccceeeccccCCCEEEECCCCcEEEEeCCCCcEEEEEEEc
Confidence 14899999999999999999999999999999997
Q ss_pred CCCC--------ceeeec------------------hhhhccCCCHHHHHHHhCCCHHHHHHHhhhc
Q 038563 153 SQNP--------GLQKIP------------------SAVFGSNIKEELLEKAFGLTPKEIAKLRKRF 193 (198)
Q Consensus 153 s~~p--------g~~~~~------------------~~~f~~~~p~~vla~af~v~~~~v~~l~~~~ 193 (198)
+.+. ..+.++ .++|+ +|+.++|++||+++.+++++|+..-
T Consensus 181 ~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~s-GF~~e~La~Af~v~~e~~~kL~~~q 246 (466)
T 3kgl_A 181 LASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILN-GFTPEVLAKAFKIDVRTAQQLQNQQ 246 (466)
T ss_dssp SSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGG-GSCHHHHHHHHTSCHHHHHHHTCTT
T ss_pred CCCcccccCCceeeeEecCCCccccccccccccccCCCccc-cCCHHHHHHHhCCCHHHHHHHhccc
Confidence 6543 334554 27897 9999999999999999999998653
No 29
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.89 E-value=1.2e-22 Score=184.55 Aligned_cols=138 Identities=17% Similarity=0.266 Sum_probs=117.6
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeE---------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRI--------------- 116 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~--------------- 116 (198)
..+|.+..++ ...|.|+++|+++++++|+||++.+||||+ +.|++||++|++.++++++++..
T Consensus 28 se~G~~e~~~-~~~~~l~~~gvs~~r~~i~p~gl~lPh~~~-a~~~~yV~~G~g~~g~v~pg~~et~~~~~~~~~~~~~~ 105 (510)
T 3c3v_A 28 SEGGYIETWN-PNNQEFECAGVALSRLVLRRNALRRPFYSN-APQEIFIQQGRGYFGLIFPGCPSTYEEPAQQGRRYQSQ 105 (510)
T ss_dssp ETTEEEEECC-TTSHHHHHHTCEEEEEEECTTEEEEEEECS-SCEEEEEEECCEEEEEECTTCCCCEEEECCC-------
T ss_pred cCCceEEEeC-CCCcccccCcEEEEEEEECCCCCccceecC-CCeEEEEEeCEEEEEEEeCCCccccccccccccccccc
Confidence 6677776765 566999999999999999999999999995 89999999999999999875310
Q ss_pred --------------------EEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCC--------ceeeec------
Q 038563 117 --------------------FAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNP--------GLQKIP------ 162 (198)
Q Consensus 117 --------------------~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~p--------g~~~~~------ 162 (198)
..+.|++||+++||+|++||++|.|+++++++++++..++ ..+.++
T Consensus 106 ~~~~~~~~~~~~~~~~d~~qkv~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~ 185 (510)
T 3c3v_A 106 RPPRRLQEEDQSQQQQDSHQKVHRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQE 185 (510)
T ss_dssp -------------CEEEEESCCEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCT
T ss_pred cccccccccccccccccccceEEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccc
Confidence 1368999999999999999999999999999999987653 223332
Q ss_pred ------------------------------------------------------hhhhccCCCHHHHHHHhCCC-HHHHH
Q 038563 163 ------------------------------------------------------SAVFGSNIKEELLEKAFGLT-PKEIA 187 (198)
Q Consensus 163 ------------------------------------------------------~~~f~~~~p~~vla~af~v~-~~~v~ 187 (198)
.+||+ ++++++|+++|+++ .++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~s-gF~~~~La~af~v~~~~~~~ 264 (510)
T 3c3v_A 186 FLRYQQQSRQSRRRSLPYSPYSPQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFS-GFTPEFLAQAFQVDDRQIVQ 264 (510)
T ss_dssp TGGGCC------------------------------------------------CCTGG-GSCHHHHHHHHTCCCHHHHH
T ss_pred cchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccee-cCCHHHHHHHhCCCHHHHHH
Confidence 25887 99999999999999 99999
Q ss_pred HHhhh
Q 038563 188 KLRKR 192 (198)
Q Consensus 188 ~l~~~ 192 (198)
+|+..
T Consensus 265 ~l~~~ 269 (510)
T 3c3v_A 265 NLRGE 269 (510)
T ss_dssp HHTTT
T ss_pred Hhhcc
Confidence 99754
No 30
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.87 E-value=1.1e-20 Score=165.89 Aligned_cols=155 Identities=15% Similarity=0.177 Sum_probs=130.2
Q ss_pred ccCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC
Q 038563 35 TVEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN 114 (198)
Q Consensus 35 ~~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 114 (198)
.+..|+|+....++ ....++.++.+....++..+ ++++.+++++||+..++|||+.+.|++||++|++++.+.+.+|
T Consensus 222 ~~~~~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~g 298 (385)
T 1j58_A 222 VPYPFTYRLLEQEP-IESEGGKVYIADSTNFKVSK--TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASDG 298 (385)
T ss_dssp CSSCSEEEGGGSCC-EECSSEEEEEESTTTSTTCC--SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEETT
T ss_pred CCCCeeeecccCCC-eeCCCceEEEeecccCCccc--ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCCC
Confidence 34567888655543 22457778888877777554 6889999999999999999987799999999999999886666
Q ss_pred eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeechhhhccCCCHHHHHHHhCCCHHHHHHHhhhcC
Q 038563 115 RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 115 ~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~~~~f~~~~p~~vla~af~v~~~~v~~l~~~~~ 194 (198)
+...+.|++||+++||+|..|++.|.|++++.+++++....+....+. +|++ .+|+++++++|+++++++++|++...
T Consensus 299 ~~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~-~~l~-~~~~~v~~~~f~~~~~~~~~l~~~~~ 376 (385)
T 1j58_A 299 HARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLN-QWLA-MLPETFVQAHLDLGKDFTDVLSKEKH 376 (385)
T ss_dssp EEEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHH-HHHH-TSCHHHHHHHHTCCHHHHTTCCSSCC
T ss_pred cEEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHH-HHHH-hCCHHHHHHHhCCCHHHHHhhhccCC
Confidence 545789999999999999999999999999999999988777766665 5887 79999999999999999999987654
No 31
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.87 E-value=1.6e-21 Score=176.93 Aligned_cols=138 Identities=18% Similarity=0.300 Sum_probs=117.6
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC-Ce---------------
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ-NR--------------- 115 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~--------------- 115 (198)
..||.+..++ ..+|+|+++|++++|++|.|+|+++||+|+ +.|++||++|++.++|+.+. .+
T Consensus 28 se~G~~e~w~-~~~p~l~~~Gvs~~R~~i~p~Gl~lPh~~~-a~el~yV~qG~g~~G~v~Pgcpet~~~~~~~~~~~~~~ 105 (531)
T 3fz3_A 28 AEAGQIETWN-FNQGDFQCAGVAASRITIQRNGLHLPSYSN-APQLIYIVQGRGVLGAVFSGCPETFEESQQSSQQGRQQ 105 (531)
T ss_dssp ETTEEEEECC-TTSHHHHHHTEEEEEEEECTTEEEEEEEES-SCEEEEEEECEEEEEECCTTCCCCEECCCC--------
T ss_pred cCCceEEEeC-CCChhhccCcceEEEEEecCCCEeCCccCC-CCeEEEEEECcEEEEEEcCCCccccccccccccccccc
Confidence 7788887887 569999999999999999999999999996 99999999999999999763 01
Q ss_pred -----------------------------------------------------------------EEEEEEeCCcEEEEC
Q 038563 116 -----------------------------------------------------------------IFAKVIEKGEVMVFP 130 (198)
Q Consensus 116 -----------------------------------------------------------------~~~~~l~~Gd~~~iP 130 (198)
-....+++||++.||
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~hqkv~~vr~GDviaiP 185 (531)
T 3fz3_A 106 EQEQERQQQQQGEQGRQQGQQEQQQERQGRQQGRQQQEEGRQQEQQQGQQGRPQQQQQFRQLDRHQKTRRIREGDVVAIP 185 (531)
T ss_dssp -----------------------------------------------------------CCSCEESCCEEEETTEEEEEC
T ss_pred cccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccceeeecccCCcEEEEC
Confidence 013578999999999
Q ss_pred CCCeeEEEecCCCcEEEEEEEeCCC--------Cceeeec----------------------------------------
Q 038563 131 RGLVHFQMNVGDTWATILGSFDSQN--------PGLQKIP---------------------------------------- 162 (198)
Q Consensus 131 ~G~~H~~~N~g~~~~~~~~~~~s~~--------pg~~~~~---------------------------------------- 162 (198)
+|..||++|.|+++++++++++..+ |-.+.++
T Consensus 186 aG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (531)
T 3fz3_A 186 AGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQPFGRPRQQEQQ 265 (531)
T ss_dssp TTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC-------------------------------
T ss_pred CCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccccccccchhhhc
Confidence 9999999999999999999997543 2223332
Q ss_pred ---hhhhccCCCHHHHHHHhCCCHHHHHHHhhh
Q 038563 163 ---SAVFGSNIKEELLEKAFGLTPKEIAKLRKR 192 (198)
Q Consensus 163 ---~~~f~~~~p~~vla~af~v~~~~v~~l~~~ 192 (198)
.++|+ +|++++|+.||+++.++++||...
T Consensus 266 ~~~~nifs-GFs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 266 GNGNNVFS-GFNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp -CCSSGGG-GSCHHHHHHHHTSCHHHHHHHHTS
T ss_pred ccCCCeee-cCCHHHHHHHHCCCHHHHHHHhcc
Confidence 25887 999999999999999999999854
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.85 E-value=9e-21 Score=166.41 Aligned_cols=147 Identities=24% Similarity=0.335 Sum_probs=126.5
Q ss_pred eEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEE
Q 038563 39 FVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFA 118 (198)
Q Consensus 39 f~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~ 118 (198)
++|+........ ..||+++.++...+|.++ ++++.++++.||+..++|||+ +.|++||++|++++++++.+|+.+.
T Consensus 48 ~~~~~~~~~~~~-~~~G~~~~~~~~~lp~~~--~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~g~~~~ 123 (385)
T 1j58_A 48 MKFSFSDTHNRL-EKGGYAREVTVRELPISE--NLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDEKGRSFI 123 (385)
T ss_dssp CEECGGGSCCEE-ETTEEEEEECTTTCTTCS--SCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECTTSCEEE
T ss_pred eEEEcccCCccc-cCCcEEEEeccccCcccC--ceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeCCCcEEE
Confidence 888876555433 689999999999999988 789999999999999999997 8999999999999999988788656
Q ss_pred EEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCceee--echhhhccCCCHHHHHHHhCCCHHHHHHHhh
Q 038563 119 KVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQK--IPSAVFGSNIKEELLEKAFGLTPKEIAKLRK 191 (198)
Q Consensus 119 ~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~--~~~~~f~~~~p~~vla~af~v~~~~v~~l~~ 191 (198)
+.|++||+++||+|..|++.|.+ +++.++.+|+...+.... ...+||+ .+|.++|+++|+++.++++++++
T Consensus 124 ~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 124 DDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLA-HTPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHH-TSCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhh-cccHHHHHHHhCCCHHHHHhccc
Confidence 79999999999999999999997 468999999877664322 1246888 89999999999999998888754
No 33
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=99.77 E-value=5.3e-19 Score=123.33 Aligned_cols=75 Identities=21% Similarity=0.237 Sum_probs=65.4
Q ss_pred EeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe
Q 038563 41 FSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR 115 (198)
Q Consensus 41 ~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~ 115 (198)
|++..+.+.++...|+++.+++.++|+|+++|+|++|+++.||++.+|||||+|+|++||++|++++++++++|+
T Consensus 4 fnl~~~~p~~~n~~G~~~~~~~~~~P~Ln~lgls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~~V~~~g~ 78 (79)
T 1dgw_X 4 FNLRSRDPIYSNNYGKLYEITPEKNSQLRDLDILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQ 78 (79)
T ss_dssp EETTSSCCSEECSSEEEEEECTTTCHHHHTTTEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEEEEEEC--
T ss_pred cccccCCCCccCCCCcEEEEChhhCcccCcCCcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEEEecCCCC
Confidence 566666666554555679999999999999999999999999999999999999999999999999999987664
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=4.2e-15 Score=110.15 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=73.3
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.+++++||+..++|||+...|++||++|++++.+. +++ ...|++||++++|+|..|++.|.+++++.+++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~~~--~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~ 113 (125)
T 3h8u_A 38 DSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQG--NGI--VTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVV 113 (125)
T ss_dssp SCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEECS--TTC--EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEEC--CCe--EEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEE
Confidence 578889999999999999998779999999999998651 355 5799999999999999999999999999999999
Q ss_pred eCCCCcee
Q 038563 152 DSQNPGLQ 159 (198)
Q Consensus 152 ~s~~pg~~ 159 (198)
....+++.
T Consensus 114 ~p~~~~~~ 121 (125)
T 3h8u_A 114 APGNAGFA 121 (125)
T ss_dssp ESTTCCCC
T ss_pred CCCcccch
Confidence 87766654
No 35
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=99.55 E-value=5.3e-14 Score=109.29 Aligned_cols=114 Identities=12% Similarity=-0.006 Sum_probs=83.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC----CeEEEEEEeCCcEEEECCCCeeEEEecC-CCcEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ----NRIFAKVIEKGEVMVFPRGLVHFQMNVG-DTWAT 146 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~----~~~~~~~l~~Gd~~~iP~G~~H~~~N~g-~~~~~ 146 (198)
++.+.+++++||+..++|+|+ ..|++||++|++++.+.+.+ ++.....|++||++++|+|..|++.|.+ ++++.
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~~~~~~~~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~ 118 (163)
T 1lr5_A 40 EVEVWLQTISPGQRTPIHRHS-CEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQ 118 (163)
T ss_dssp SEEEEEEEECTTCBCCEEEES-SCEEEEEEECCEEEEECCSSSSSCCSCEEEEECTTEEEEECTTCCEEEECCCSSSCEE
T ss_pred cEEEEEEEECCCCcCCCeECC-CCeEEEEEeCEEEEEECCccccccCccEEEEeCCCCEEEECCCCcEEeEeCCCCCCEE
Confidence 578889999999999999995 78999999999999885421 1113679999999999999999999999 89999
Q ss_pred EEEEEeCCCCceeeechhhhccCCCHHHHHHHhCCCHHHHHH
Q 038563 147 ILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFGLTPKEIAK 188 (198)
Q Consensus 147 ~~~~~~s~~pg~~~~~~~~f~~~~p~~vla~af~v~~~~v~~ 188 (198)
+++++...... ......|+. .+....+...+.++++.+++
T Consensus 119 ~l~i~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 158 (163)
T 1lr5_A 119 VLVIISRPPAK-IFLYDDWSM-PHTAAVLKFPFVWDEDCFEA 158 (163)
T ss_dssp EEEEEESSSCC-EEEESSTTS-CGGGCEEESSCTTTHHHHHH
T ss_pred EEEEECCCCcc-ccccccccc-CCcCccceeccccccccccc
Confidence 99988764333 333334443 23333333334555555554
No 36
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=99.54 E-value=5.7e-14 Score=108.90 Aligned_cols=85 Identities=21% Similarity=0.176 Sum_probs=73.5
Q ss_pred ceEEEEEEEeCCc-EecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCC-CeeEEEecCCCcEEEEE
Q 038563 72 GMSMVRADFDVGG-VNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRG-LVHFQMNVGDTWATILG 149 (198)
Q Consensus 72 gls~~~~~l~pg~-~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G-~~H~~~N~g~~~~~~~~ 149 (198)
++.+.+++++||+ ..++|||+...|++||++|++++.+ +++ ...|++||+++||+| ..|++.|.+++++.+++
T Consensus 45 ~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~ 119 (162)
T 3l2h_A 45 HMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLTM---END--QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLV 119 (162)
T ss_dssp SEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCCEEEECCSSSCEEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEEE---CCE--EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEE
Confidence 6789999999999 4899999878999999999999886 355 579999999999998 99999999999999999
Q ss_pred EEeCCCCceeee
Q 038563 150 SFDSQNPGLQKI 161 (198)
Q Consensus 150 ~~~s~~pg~~~~ 161 (198)
+.....+....+
T Consensus 120 v~~p~~~~~~~~ 131 (162)
T 3l2h_A 120 IGQRLDQDVVDY 131 (162)
T ss_dssp EEECCSEEEEEE
T ss_pred EECCCCCCeEec
Confidence 887654433333
No 37
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=99.54 E-value=1.1e-14 Score=121.04 Aligned_cols=82 Identities=21% Similarity=0.233 Sum_probs=71.1
Q ss_pred ccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEE--------EeC-------CCeEEEEEEeCCcEEEECCCCe
Q 038563 70 TLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGF--------VDT-------QNRIFAKVIEKGEVMVFPRGLV 134 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~--------~~~-------~~~~~~~~l~~Gd~~~iP~G~~ 134 (198)
+.++++.+++++||+..++|+|++..|++||++|++++.+ .+. +++.+...+++||++++|+|.+
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GD~i~iP~g~~ 119 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHSTKQYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYM 119 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEEEEEECCCTTSCCSTTTTCCEEEEEEECCTTEEEEECTTEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEEEecccccCCCcccccccccCceeEEEECCCCEEEECCCCC
Confidence 3468999999999999999999989999999999999987 322 1344568999999999999999
Q ss_pred eEEEecCCCcEEE-EEEE
Q 038563 135 HFQMNVGDTWATI-LGSF 151 (198)
Q Consensus 135 H~~~N~g~~~~~~-~~~~ 151 (198)
|.+.|.+++++.+ ++++
T Consensus 120 H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 120 HGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEECCSSSCEEEEEEEE
T ss_pred EEEEeCCCCCEEEEEEEE
Confidence 9999999999988 6766
No 38
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=99.54 E-value=2.5e-13 Score=106.66 Aligned_cols=117 Identities=15% Similarity=0.157 Sum_probs=90.8
Q ss_pred CCCcccCceEEeccccCC---CcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEE
Q 038563 31 SSLVTVEDFVFSGIKFRG---KFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIY 106 (198)
Q Consensus 31 ~~~~~~~df~~~~~~~~~---~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~ 106 (198)
++.+..+++.|....... ..+ ..|...+.+..... +....++.+.+++++||+..++|||+ ..|++||++|+++
T Consensus 11 ~~iv~~~~~~W~~~~~~~~~~~~~~~~g~~~~~L~~~~~-g~~~~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~ 88 (167)
T 3ibm_A 11 SRVLRERDYRWEGTEEEAYKAEGTHFSGARRQTLVGRPA-GQEAPAFETRYFEVEPGGYTTLERHE-HTHVVMVVRGHAE 88 (167)
T ss_dssp CEEECEETTEETTCCCC---------CCEEEEEEECTTT-TCCSSSEEEEEEEECTTCBCCCBBCS-SCEEEEEEESEEE
T ss_pred CceeecCCcccccceeeeccCCCCcCCCcEEEEEECCCC-CCCCCcEEEEEEEECCCCCCCCccCC-CcEEEEEEeCEEE
Confidence 456688899999754311 111 45666666654333 22234788999999999999999995 8999999999999
Q ss_pred EEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecC-CCcEEEEEEEeCC
Q 038563 107 SGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVG-DTWATILGSFDSQ 154 (198)
Q Consensus 107 ~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g-~~~~~~~~~~~s~ 154 (198)
+.+ +++ .+.|++||+++||+|..|.+.|.+ ++++.+++++...
T Consensus 89 ~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 89 VVL---DDR--VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp EEE---TTE--EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred EEE---CCE--EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 887 355 579999999999999999999999 9999999998754
No 39
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=99.54 E-value=1.2e-13 Score=97.76 Aligned_cols=77 Identities=18% Similarity=0.152 Sum_probs=69.4
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.++.++||...++|+|+...|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.+++++.+++++
T Consensus 27 ~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~ 101 (105)
T 1v70_A 27 RMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---GEE--EALLAPGMAAFAPAGAPHGVRNESASPALLLVVT 101 (105)
T ss_dssp TEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred ceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEe
Confidence 68899999999999999999767899999999999876 355 5799999999999999999999999999999887
Q ss_pred eC
Q 038563 152 DS 153 (198)
Q Consensus 152 ~s 153 (198)
..
T Consensus 102 ~p 103 (105)
T 1v70_A 102 AP 103 (105)
T ss_dssp ES
T ss_pred CC
Confidence 64
No 40
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=99.52 E-value=6.1e-14 Score=100.05 Aligned_cols=76 Identities=17% Similarity=0.162 Sum_probs=67.1
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.+.+.+++++||+..++|+|+...|++||++|++++.+. ++ + ...|++||++++|+|..|...|.|+++++++.+
T Consensus 17 ~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~~~--~g~~--~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 17 RVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLETP--EGSV--TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp SEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEEET--TEEE--EEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEEeC--CCCE--EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 688999999999999999998766799999999998863 23 3 579999999999999999999999999988876
Q ss_pred E
Q 038563 151 F 151 (198)
Q Consensus 151 ~ 151 (198)
-
T Consensus 93 ~ 93 (97)
T 2fqp_A 93 E 93 (97)
T ss_dssp E
T ss_pred E
Confidence 4
No 41
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=99.50 E-value=3.4e-13 Score=107.98 Aligned_cols=83 Identities=23% Similarity=0.277 Sum_probs=74.2
Q ss_pred ceEEEEEEEeCCcE------ecceeCC--CCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCC
Q 038563 72 GMSMVRADFDVGGV------NVPHFHP--RATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDT 143 (198)
Q Consensus 72 gls~~~~~l~pg~~------~~pH~Hp--~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~ 143 (198)
++.+.+++++||+. .++|+|+ ...|++||++|++.+.+.+..|+.+...|++||+++||+|..|++.|.|++
T Consensus 66 ~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~g~~~~~~l~~GD~v~ip~g~~H~~~N~g~~ 145 (190)
T 1x82_A 66 DLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDE 145 (190)
T ss_dssp CEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTTCCEEEEEECTTCEEEECTTCEEEEEECSSS
T ss_pred CeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcCCcEEEEEECCCcEEEECCCCeEEEEECCcc
Confidence 57888889999998 8899997 358999999999999988766777778999999999999999999999999
Q ss_pred cEEEEEEEeCC
Q 038563 144 WATILGSFDSQ 154 (198)
Q Consensus 144 ~~~~~~~~~s~ 154 (198)
++++++++...
T Consensus 146 ~~~~l~v~~~~ 156 (190)
T 1x82_A 146 PFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEEEETT
T ss_pred cEEEEEEECCC
Confidence 99999988753
No 42
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=99.49 E-value=8.8e-13 Score=103.01 Aligned_cols=85 Identities=20% Similarity=0.195 Sum_probs=73.3
Q ss_pred ceEEEEEEEeCCcEe-cceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCC--CeeEEEecCCCcEEEE
Q 038563 72 GMSMVRADFDVGGVN-VPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRG--LVHFQMNVGDTWATIL 148 (198)
Q Consensus 72 gls~~~~~l~pg~~~-~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G--~~H~~~N~g~~~~~~~ 148 (198)
.+.+.+++++||+.. ++|+|+...|++||++|++++.+. ++ ...|++||+++||+| ..|.+.|.++++++++
T Consensus 42 ~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~~~---~~--~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l 116 (163)
T 3i7d_A 42 QFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLVDD---QG--EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFL 116 (163)
T ss_dssp SEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEEET---TE--EEEECTTCEEEECTTCCCCBEEECCSSSCEEEE
T ss_pred eEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEEEC---CE--EEEeCCCCEEEECCCCCcceEEEECCCCCEEEE
Confidence 688899999999965 899998668999999999999873 55 579999999999999 9999999999999999
Q ss_pred EEEeCCCCceeee
Q 038563 149 GSFDSQNPGLQKI 161 (198)
Q Consensus 149 ~~~~s~~pg~~~~ 161 (198)
+++..........
T Consensus 117 ~v~~p~~~d~~~y 129 (163)
T 3i7d_A 117 VVGTRTPTETAYY 129 (163)
T ss_dssp EEEECCSCEEEEE
T ss_pred EEECCCCCCcccC
Confidence 9988655444333
No 43
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=99.48 E-value=5.3e-13 Score=96.07 Aligned_cols=78 Identities=17% Similarity=0.187 Sum_probs=69.8
Q ss_pred cceEEEEEEEeCCcEecce--eCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPH--FHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH--~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
.++.+.+++++||...++| +|+...|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.+++++.++
T Consensus 19 ~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~ 93 (113)
T 2gu9_A 19 RQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAIV---DGH--TQALQAGSLIAIERGQAHEIRNTGDTPLKTV 93 (113)
T ss_dssp TTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEcCCCCCEEEE
Confidence 3688999999999999988 99768999999999999887 355 5799999999999999999999999999999
Q ss_pred EEEeC
Q 038563 149 GSFDS 153 (198)
Q Consensus 149 ~~~~s 153 (198)
+++..
T Consensus 94 ~v~~~ 98 (113)
T 2gu9_A 94 NFYHP 98 (113)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 88765
No 44
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=99.48 E-value=4.2e-13 Score=102.80 Aligned_cols=83 Identities=17% Similarity=0.218 Sum_probs=71.1
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.+.+.+++++||...++|+|+...|++||++|++++.+.+..+. .+...|++||+++||+|..|.+.|.+++++.++++
T Consensus 42 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~~~~~~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i 121 (148)
T 2oa2_A 42 HLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQDNLHFQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSI 121 (148)
T ss_dssp SCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBTTBCCEEEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred ceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCccccceeeEEECCCCEEEECCCCcEEEEECCCCCEEEEEE
Confidence 57888899999999999999877799999999999998643211 13379999999999999999999999999999988
Q ss_pred EeCC
Q 038563 151 FDSQ 154 (198)
Q Consensus 151 ~~s~ 154 (198)
+...
T Consensus 122 ~~~~ 125 (148)
T 2oa2_A 122 YAPP 125 (148)
T ss_dssp EESC
T ss_pred ECCC
Confidence 7654
No 45
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=99.48 E-value=2.4e-14 Score=103.23 Aligned_cols=77 Identities=12% Similarity=0.060 Sum_probs=67.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.+.+.|++++||+..++|+|+...|+++|++|++++.. .++......|++||++++|+|..|.+.|.|++++++|.+
T Consensus 16 ~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~--~d~~~~~~~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIVA--PDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEEC--TTSCEECCCBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred eEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEEe--CCCceEEEEecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 68999999999999999999988899999999998765 334433567899999999999999999999999999987
No 46
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=99.46 E-value=4.1e-13 Score=99.33 Aligned_cols=77 Identities=19% Similarity=0.312 Sum_probs=68.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.+++++||...++|+|+ ..|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.++ ++.++.++
T Consensus 40 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~ 112 (126)
T 4e2g_A 40 NLMLNWVRIEPNTEMPAHEHP-HEQAGVMLEGTLELTI---GEE--TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIF 112 (126)
T ss_dssp SCEEEEEEECTTCEEEEECCS-SEEEEEEEEECEEEEE---TTE--EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEE
T ss_pred CeEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEE
Confidence 689999999999999999997 5999999999999887 355 5799999999999999999999987 88888888
Q ss_pred eCCC
Q 038563 152 DSQN 155 (198)
Q Consensus 152 ~s~~ 155 (198)
....
T Consensus 113 ~p~~ 116 (126)
T 4e2g_A 113 SPPR 116 (126)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 7543
No 47
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=99.46 E-value=8.1e-13 Score=99.58 Aligned_cols=85 Identities=22% Similarity=0.298 Sum_probs=72.7
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++.+++++||+..++|+|+ ..|++||++|++++.+. .+++ ...|++||++++|+|..|.+.|.+++++.+++++
T Consensus 38 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~~-~~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~ 113 (145)
T 3ht1_A 38 RFVLTEFEVSPNGSTPPHFHE-WEHEIYVLEGSMGLVLP-DQGR--TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVA 113 (145)
T ss_dssp SEEEEEEEEEEEEECCCEECS-SCEEEEEEEECEEEEEG-GGTE--EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCccCC-CceEEEEEEeEEEEEEe-ECCE--EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEE
Confidence 688999999999999999996 67888999999998721 1355 5799999999999999999999999999999998
Q ss_pred eCCCCceee
Q 038563 152 DSQNPGLQK 160 (198)
Q Consensus 152 ~s~~pg~~~ 160 (198)
....+....
T Consensus 114 ~~~~~~~~~ 122 (145)
T 3ht1_A 114 PCERPPVRN 122 (145)
T ss_dssp ESCCCCCEE
T ss_pred CCCCCCeeE
Confidence 876665443
No 48
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=99.45 E-value=2.8e-13 Score=107.31 Aligned_cols=79 Identities=20% Similarity=0.232 Sum_probs=71.5
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
|..+.+++++||+..++|.|. ..|++||++|++++.+. +++ .+.|++||++ ||+|..|.+.|.|++++++++++
T Consensus 78 G~~~~~v~l~PG~~~~~H~H~-~eE~~~VLeGel~l~ld--~ge--~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~ 151 (172)
T 3es1_A 78 GSVIRVVDMLPGKESPMHRTN-SIDYGIVLEGEIELELD--DGA--KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFIL 151 (172)
T ss_dssp SEEEEEEEECTTCBCCCBCCS-EEEEEEEEESCEEEECG--GGC--EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEE
T ss_pred CeEEEEEEECCCCCCCCeecC-ceEEEEEEeCEEEEEEC--CCe--EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEE
Confidence 899999999999999999995 78999999999998863 145 5799999999 99999999999999999999999
Q ss_pred eCCCC
Q 038563 152 DSQNP 156 (198)
Q Consensus 152 ~s~~p 156 (198)
....|
T Consensus 152 ~P~~p 156 (172)
T 3es1_A 152 IEAPA 156 (172)
T ss_dssp EECCC
T ss_pred cCCCc
Confidence 87776
No 49
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.45 E-value=1.2e-12 Score=98.49 Aligned_cols=77 Identities=22% Similarity=0.157 Sum_probs=68.2
Q ss_pred ccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 70 TLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
+..+.+.+++++||+..++|+|+...|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.+++++.+++
T Consensus 54 ~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~ 128 (133)
T 1o4t_A 54 NKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---NGK--DVPIKAGDVCFTDSGESHSIENTGNTDLEFLA 128 (133)
T ss_dssp TSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCEEEEECCSSSCEEEEE
T ss_pred CceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE---CCE--EEEeCCCcEEEECCCCcEEeEECCCCCEEEEE
Confidence 3457888999999999999999757999999999999886 355 57999999999999999999999999998887
Q ss_pred EE
Q 038563 150 SF 151 (198)
Q Consensus 150 ~~ 151 (198)
+.
T Consensus 129 v~ 130 (133)
T 1o4t_A 129 VI 130 (133)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 50
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=99.45 E-value=1e-12 Score=102.34 Aligned_cols=79 Identities=13% Similarity=0.116 Sum_probs=71.3
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
..+.+.+++++||+..++|+|+ ..|++||++|++++.+ +++ ...|++||+++||+|..|.+.|.+++++.++++
T Consensus 42 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~v~v---~g~--~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i 115 (156)
T 3kgz_A 42 LACEWRYFEVDEGGYSTLERHA-HVHAVMIHRGHGQCLV---GET--ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCV 115 (156)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCEEEECCSSSCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4788999999999999999996 6899999999999986 356 579999999999999999999999999999999
Q ss_pred EeCCC
Q 038563 151 FDSQN 155 (198)
Q Consensus 151 ~~s~~ 155 (198)
++...
T Consensus 116 ~~~~~ 120 (156)
T 3kgz_A 116 VNAAR 120 (156)
T ss_dssp EESSC
T ss_pred EeCCC
Confidence 98643
No 51
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=99.43 E-value=1e-12 Score=96.59 Aligned_cols=74 Identities=15% Similarity=0.221 Sum_probs=63.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.++.++||...++|||+ ..|++||++|++++.+ +++ .+.|++||++++|+|..|.+.|.++....++.++
T Consensus 35 ~~~v~~~~l~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i---~~~--~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~ 108 (114)
T 3fjs_A 35 RLEVMRMVLPAGKQVGSHSVA-GPSTIQCLEGEVEIGV---DGA--QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVL 108 (114)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SCEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEESSSEEEEEEEEC
T ss_pred CEEEEEEEECCCCccCceeCC-CcEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEe
Confidence 689999999999999999997 5799999999999987 355 5799999999999999999999876555444433
No 52
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=99.43 E-value=2.1e-12 Score=101.55 Aligned_cols=78 Identities=13% Similarity=0.095 Sum_probs=70.5
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.++.+.+++++||+..++|||+ ..|++||++|++++.+ +++ ...|++||+++||+|..|.+.|.+++++.++++
T Consensus 51 ~~~~~~~~~l~pG~~~~~H~H~-~~E~~~Vl~G~~~~~v---~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i 124 (166)
T 3jzv_A 51 LTGELRYFEVGPGGHSTLERHQ-HAHGVMILKGRGHAMV---GRA--VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCM 124 (166)
T ss_dssp CSEEEEEEEEEEEEECCCBBCS-SCEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEECCTTSCEEEEEE
T ss_pred CeEEEEEEEECCCCccCceeCC-CcEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 4688889999999999999996 6899999999999876 356 579999999999999999999999999999999
Q ss_pred EeCC
Q 038563 151 FDSQ 154 (198)
Q Consensus 151 ~~s~ 154 (198)
+...
T Consensus 125 ~~~~ 128 (166)
T 3jzv_A 125 VNAE 128 (166)
T ss_dssp EESS
T ss_pred EccC
Confidence 8754
No 53
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=99.43 E-value=2.1e-12 Score=94.04 Aligned_cols=77 Identities=19% Similarity=0.312 Sum_probs=67.2
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.+++++||...++|+|+ ..|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.+ ++.+++++
T Consensus 33 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~ 104 (116)
T 2pfw_A 33 ELMAVKIWFDKGAEGYVHAHR-HSQVSYVVEGEFHVNV---DGV--IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTF 104 (116)
T ss_dssp TEEEEEEEECTTEEEEEECCS-SEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCcCCcEECC-cceEEEEEeeEEEEEE---CCE--EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEE
Confidence 478899999999999999996 7999999999999887 355 579999999999999999999987 67888888
Q ss_pred eCCCC
Q 038563 152 DSQNP 156 (198)
Q Consensus 152 ~s~~p 156 (198)
....+
T Consensus 105 ~p~~~ 109 (116)
T 2pfw_A 105 SPARE 109 (116)
T ss_dssp ESCCG
T ss_pred CCchh
Confidence 75443
No 54
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=99.42 E-value=3.6e-12 Score=97.76 Aligned_cols=97 Identities=25% Similarity=0.386 Sum_probs=77.5
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.++.+.+++++||...++|+|+. .|++||++|++++.+. ++. ...|++||++++|+|..|++.|.+++++.++++
T Consensus 46 ~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~~~---~~~-~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 120 (147)
T 2f4p_A 46 FNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQER---GKP-ARILKKGDVVEIPPNVVHWHGAAPDEELVHIGI 120 (147)
T ss_dssp SSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEEET---TSC-CEEEETTCEEEECTTCCEEEEEBTTBCEEEEEE
T ss_pred CcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEEEC---CEE-EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 47899999999999999999964 9999999999998863 442 168999999999999999999999999999988
Q ss_pred EeCCCCceeeechhhhccCCCHHHHHH
Q 038563 151 FDSQNPGLQKIPSAVFGSNIKEELLEK 177 (198)
Q Consensus 151 ~~s~~pg~~~~~~~~f~~~~p~~vla~ 177 (198)
+...+.. ...|+. .+.++...+
T Consensus 121 ~~~~~~~----~~~wl~-~v~~e~~~~ 142 (147)
T 2f4p_A 121 STQVHLG----PAEWLG-SVTEEEYRK 142 (147)
T ss_dssp ECCGGGC----CCEECC-CCCHHHHHH
T ss_pred EccCCCC----Cceecc-cCCHHHhhh
Confidence 7653221 123555 566665544
No 55
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=99.40 E-value=4.3e-13 Score=96.76 Aligned_cols=78 Identities=12% Similarity=0.051 Sum_probs=65.5
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+.+.+++|+||+...+|.|+...+++++++|++++. ..+|+.....|++||++++|+|..|++.|.|+++++++++-
T Consensus 16 ~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~~--~~dG~~~~~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~vE 93 (98)
T 2ozi_A 16 EVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIV--APDGTRSLAQLKTGRSYARKAGVQHDVRNESTAEIVFLEIE 93 (98)
T ss_dssp SEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEE--CTTSCEECCCBCTTCCEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEEE--eCCCcEEEEEECCCCEEEECCCCceeCEECCCCCEEEEEEE
Confidence 6899999999999999999986666677788888764 34565234689999999999999999999999999999874
No 56
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=99.40 E-value=2.5e-12 Score=95.78 Aligned_cols=78 Identities=21% Similarity=0.161 Sum_probs=69.3
Q ss_pred ccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 70 TLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
+.++.+.+++++||+..++|+|+ ..|++||++|++++.+. ++ ...|++||++++|+|..|.+.|.+++++.+++
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~ 118 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHP-WEHEIFVLKGKLTVLKE---QG--EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLC 118 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCS-SCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCEEEECCSSSCEEEEE
T ss_pred CCCEEEEEEEECCCCcCCceeCC-CcEEEEEEEeEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEE
Confidence 44789999999999999999996 79999999999998763 55 47999999999999999999999999999888
Q ss_pred EEeC
Q 038563 150 SFDS 153 (198)
Q Consensus 150 ~~~s 153 (198)
++..
T Consensus 119 v~~~ 122 (126)
T 1vj2_A 119 LIPK 122 (126)
T ss_dssp EEEG
T ss_pred EEcc
Confidence 7754
No 57
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=99.39 E-value=3.6e-12 Score=93.20 Aligned_cols=75 Identities=8% Similarity=0.146 Sum_probs=65.8
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEE-EEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAK-VIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~-~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
++.+.++.+.||...++|+|+ ..|++||++|++++.+. ++ .. .|++||++++|+|..|.+.|.+++++.++++
T Consensus 26 ~~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 26 HVQINHIVLPRGEQMPKHYSN-SYVHLIIIKGEMTLTLE---DQ--EPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp SCEEEEEEEETTCBCCCEECS-SCEEEEEEESEEEEEET---TS--CCEEEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred ceEEEEEEECCCCcCCCEeCC-CcEEEEEEeCEEEEEEC---CE--EEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 567888999999999999994 79999999999998873 44 35 8999999999999999999999999888877
Q ss_pred Ee
Q 038563 151 FD 152 (198)
Q Consensus 151 ~~ 152 (198)
..
T Consensus 100 ~~ 101 (117)
T 2b8m_A 100 KA 101 (117)
T ss_dssp EC
T ss_pred EC
Confidence 43
No 58
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=99.38 E-value=3.9e-12 Score=101.24 Aligned_cols=82 Identities=17% Similarity=0.160 Sum_probs=68.5
Q ss_pred ccccceEEEEEEEeCCcEec---ceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEec-CCC
Q 038563 68 LNTLGMSMVRADFDVGGVNV---PHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNV-GDT 143 (198)
Q Consensus 68 l~~~gls~~~~~l~pg~~~~---pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~-g~~ 143 (198)
..+..+.+.+++++||+..+ +|+|+ ..|++||++|++++.+.+ .+....+.|++||+++||++.+|.+.|. +++
T Consensus 112 ~~~~~~~~~~~~~~pg~~~~~~~~h~h~-~~E~~~Vl~G~~~~~~~~-~~~~~~~~l~~GD~~~~~~~~~H~~~n~~~~~ 189 (198)
T 2bnm_A 112 KRAPSLVPLVVDVLTDNPDDAKFNSGHA-GNEFLFVLEGEIHMKWGD-KENPKEALLPTGASMFVEEHVPHAFTAAKGTG 189 (198)
T ss_dssp TTSTTCEEEEEEECCCCGGGCCCCCCCS-SCEEEEEEESCEEEEESC-TTSCEEEEECTTCEEEECTTCCEEEEESTTSC
T ss_pred CCCCcceEEEEEEcCCCCCcccccccCC-CeEEEEEEeeeEEEEECC-cCCcccEEECCCCEEEeCCCCceEEEecCCCC
Confidence 34447899999999999876 79996 599999999999998742 1111267999999999999999999999 999
Q ss_pred cEEEEEEE
Q 038563 144 WATILGSF 151 (198)
Q Consensus 144 ~~~~~~~~ 151 (198)
++.+++++
T Consensus 190 ~~~~l~v~ 197 (198)
T 2bnm_A 190 SAKLIAVN 197 (198)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEe
Confidence 99998875
No 59
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=99.38 E-value=4.6e-12 Score=93.78 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=66.5
Q ss_pred ccceEEEEEEEeCCcEec-ceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 70 TLGMSMVRADFDVGGVNV-PHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~-pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
..++.+.++.++||...+ +|+|+...+++||++|++++.+ +++ ...|++||++++|+|.+|.+.|.+++++.++
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~ 97 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFITI---DGE--KIELQAGDWLRIAPDGKRQISAASDSPIGFL 97 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTCCEEEEEBTTBCEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCcEEEEcCCCCCEEEE
Confidence 336788889999999888 8999644445559999999887 355 5799999999999999999999999999888
Q ss_pred EEEeCC
Q 038563 149 GSFDSQ 154 (198)
Q Consensus 149 ~~~~s~ 154 (198)
+++.+.
T Consensus 98 ~i~~~~ 103 (125)
T 3cew_A 98 CIQVKA 103 (125)
T ss_dssp EEEEET
T ss_pred EEEcCC
Confidence 776543
No 60
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=99.38 E-value=6.5e-12 Score=92.99 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=67.7
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
..+.+...+++||...++||| +..|++||++|++++.+ +++ ...+++||+++||+|..|.+.|.+++++.++++
T Consensus 32 ~~~~~~~~~~~pg~~~~~H~H-~~~Ei~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i 105 (128)
T 4i4a_A 32 TPFGGAWCIVRPETKSFRHSH-NEYELFIVIQGNAIIRI---NDE--DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI 105 (128)
T ss_dssp CSSEEEEEEECTTEECCCBCC-SSEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCccCCEec-CCeEEEEEEeCEEEEEE---CCE--EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 468888999999999999999 58999999999999887 356 579999999999999999999999999888776
Q ss_pred Ee
Q 038563 151 FD 152 (198)
Q Consensus 151 ~~ 152 (198)
.-
T Consensus 106 ~f 107 (128)
T 4i4a_A 106 WW 107 (128)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 61
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=99.37 E-value=4.8e-12 Score=94.70 Aligned_cols=78 Identities=21% Similarity=0.249 Sum_probs=59.9
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.+.+.++.++||+..++|+|+...|++||++|++++.+. + + ...|++||++++|+|..|.+.|.+++ +.++++
T Consensus 42 ~~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~~~---~~~--~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~ 115 (134)
T 2o8q_A 42 GAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFEYE---DIG--AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEI 115 (134)
T ss_dssp EEEEEEECC-----CCCEEECCSCEEEEEEESEEEEEET---TTE--EEEEETTCEEECCTTCCEEEEEECTT-CEEEEE
T ss_pred EEEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEEEC---CcE--EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEE
Confidence 345666667788889999997669999999999998873 4 5 57999999999999999999998874 577777
Q ss_pred EeCCC
Q 038563 151 FDSQN 155 (198)
Q Consensus 151 ~~s~~ 155 (198)
+....
T Consensus 116 ~~p~~ 120 (134)
T 2o8q_A 116 VSPAG 120 (134)
T ss_dssp ESSTT
T ss_pred ECCCc
Confidence 76433
No 62
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=99.36 E-value=4.8e-12 Score=99.61 Aligned_cols=75 Identities=13% Similarity=-0.020 Sum_probs=65.2
Q ss_pred ceEEEEEEEeC-CcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDV-GGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~p-g~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
-+...+++++| |+...+|.|..+.|++||++|++++.+. ++ .+.|++||+++||+|..|.+.|.++++++++.+
T Consensus 87 ~~~~~~v~lpP~G~~~~~~~~h~gEE~~yVLeG~v~vtl~---g~--~~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~V 161 (166)
T 2vpv_A 87 YFASGILKLPAISGQKKLSNSFRTYITFHVIQGIVEVTVC---KN--KFLSVKGSTFQIPAFNEYAIANRGNDEAKMFFV 161 (166)
T ss_dssp SCEEEEEEECSSGGGCEEEECCSEEEEEEEEESEEEEEET---TE--EEEEETTCEEEECTTCEEEEEECSSSCEEEEEE
T ss_pred cceeEEEEECCCCCCCCCccCCCceEEEEEEEeEEEEEEC---CE--EEEEcCCCEEEECCCCCEEEEECCCCCEEEEEE
Confidence 46777889999 7766666566899999999999999983 55 579999999999999999999999999998877
Q ss_pred E
Q 038563 151 F 151 (198)
Q Consensus 151 ~ 151 (198)
.
T Consensus 162 q 162 (166)
T 2vpv_A 162 Q 162 (166)
T ss_dssp E
T ss_pred E
Confidence 4
No 63
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=99.34 E-value=2.2e-11 Score=88.32 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=63.3
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.++.++||...++|+|+ ..|++||++|++++.+ +++ ...|++||++++|+|..|.+.|.+ ++.+++++
T Consensus 39 ~~~~~~~~~~~g~~~~~H~H~-~~e~~~vl~G~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~~~v~ 110 (115)
T 1yhf_A 39 DLGITVFSLDKGQEIGRHSSP-GDAMVTILSGLAEITI---DQE--TYRVAEGQTIVMPAGIPHALYAVE--AFQMLLVV 110 (115)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTSCEEEEESS--CEEEEEEE
T ss_pred ceEEEEEEECCCCccCCEECC-CcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEECC--CceEEEEE
Confidence 678889999999999999996 6899999999999886 355 479999999999999999999987 46666655
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
-
T Consensus 111 ~ 111 (115)
T 1yhf_A 111 V 111 (115)
T ss_dssp E
T ss_pred E
Confidence 4
No 64
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.34 E-value=6.2e-12 Score=104.90 Aligned_cols=78 Identities=18% Similarity=0.108 Sum_probs=66.8
Q ss_pred ccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCC-CcEEEE
Q 038563 70 TLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGD-TWATIL 148 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~-~~~~~~ 148 (198)
+..+.+.+++++||+..+.|+|+...|++||++|++++.+ +++ ...|++||+++||+|..|++.|.|+ +++.++
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i---~~~--~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l 250 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL---DNN--WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYI 250 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES---SSC--EEEEETTCEEEECSSEEEEEEEC----CEEEE
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEE
Confidence 4468899999999999999999878999999999999886 355 5799999999999999999999999 999988
Q ss_pred EEEe
Q 038563 149 GSFD 152 (198)
Q Consensus 149 ~~~~ 152 (198)
+..+
T Consensus 251 ~~~d 254 (261)
T 1rc6_A 251 YSKD 254 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7655
No 65
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=99.33 E-value=1e-11 Score=98.56 Aligned_cols=78 Identities=18% Similarity=0.158 Sum_probs=66.2
Q ss_pred cccceEEEEEEEeCCcEec--ceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEE
Q 038563 69 NTLGMSMVRADFDVGGVNV--PHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWAT 146 (198)
Q Consensus 69 ~~~gls~~~~~l~pg~~~~--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~ 146 (198)
.+..+.+.+++++||+..+ +|+| ...|++||++|++++.+ +++ ...|++||+++||++.+|.+.|.+++++
T Consensus 100 ~~~~~~~~~~~~~pg~~~~~~~H~h-~~~E~~~Vl~G~~~~~~---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~- 172 (192)
T 1y9q_A 100 ADTGLEIFEITLLDHHQQMSSPHAL-GVIEYIHVLEGIMKVFF---DEQ--WHELQQGEHIRFFSDQPHGYAAVTEKAV- 172 (192)
T ss_dssp TTTTEEEEEEEECTTCEEEECCCST-TCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEEECSSSEEEEESSSCEE-
T ss_pred CCCcEEEEEEEECCCCCccCCCCCC-CCEEEEEEEEeEEEEEE---CCE--EEEeCCCCEEEEcCCCCeEeECCCCCcE-
Confidence 3446899999999999876 6666 46899999999999887 355 5699999999999999999999999999
Q ss_pred EEEEEeC
Q 038563 147 ILGSFDS 153 (198)
Q Consensus 147 ~~~~~~s 153 (198)
+++++..
T Consensus 173 ~l~v~~~ 179 (192)
T 1y9q_A 173 FQNIVAY 179 (192)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 7777653
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.31 E-value=1.4e-11 Score=101.79 Aligned_cols=80 Identities=14% Similarity=0.076 Sum_probs=69.7
Q ss_pred ceEEEEEEEeC-CcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDV-GGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~p-g~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
-+.+..++++| |+..++|||+ ..|++||++|++++.+. ++ ...|++||++++|+|..|.+.|.|++++.++.+
T Consensus 144 ~~~~~~~~~~p~g~~~~~H~H~-~~e~~~Vl~G~~~~~i~---~~--~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v 217 (243)
T 3h7j_A 144 WVEIMLAKIPGNGGEMPFHKHR-NEQIGICIGGGYDMTVE---GC--TVEMKFGTAYFCEPREDHGAINRSEKESKSINI 217 (243)
T ss_dssp TEEEEEEEECTTTEEEEEECCS-SEEEEEECSSCEEEEET---TE--EEEECTTCEEEECTTCCEEEEECSSSCEEEEEE
T ss_pred eeEEEEEEECCCCCcCCCEeCC-CcEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEE
Confidence 35677889999 8889999997 58999999999998873 55 568999999999999999999999999999999
Q ss_pred EeCCCCc
Q 038563 151 FDSQNPG 157 (198)
Q Consensus 151 ~~s~~pg 157 (198)
+.....+
T Consensus 218 ~~p~~~d 224 (243)
T 3h7j_A 218 FFPPRYN 224 (243)
T ss_dssp EESCSSC
T ss_pred EcCChhc
Confidence 9864443
No 67
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=99.30 E-value=2.1e-11 Score=87.38 Aligned_cols=76 Identities=25% Similarity=0.204 Sum_probs=63.1
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEE-EEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEI-AVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
++.+.++.+.||...++|+|+...|+ +||++|++++.+. +++ ...|++||++++|+|..|.+.|.++ +.++.+
T Consensus 32 ~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~~--~~~--~~~l~~Gd~~~ip~~~~H~~~~~~~--~~~l~~ 105 (110)
T 2q30_A 32 NFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVGD--GDA--VIPAPRGAVLVAPISTPHGVRAVTD--MKVLVT 105 (110)
T ss_dssp SCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEECG--GGC--EEEECTTEEEEEETTSCEEEEESSS--EEEEEE
T ss_pred CEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEeC--CCE--EEEECCCCEEEeCCCCcEEEEEcCC--cEEEEE
Confidence 67888999999999999999755788 8999999998762 135 5799999999999999999999765 556666
Q ss_pred EeC
Q 038563 151 FDS 153 (198)
Q Consensus 151 ~~s 153 (198)
+..
T Consensus 106 ~~p 108 (110)
T 2q30_A 106 IAP 108 (110)
T ss_dssp EES
T ss_pred ECC
Confidence 653
No 68
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.28 E-value=3.4e-11 Score=102.79 Aligned_cols=77 Identities=17% Similarity=0.150 Sum_probs=68.8
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++.++++.||+..++|||++..|++||++|++++.+ +++ ...|++||+++||+|..|.+.|.++ ++.++.++
T Consensus 45 ~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~ 118 (337)
T 1y3t_A 45 LFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL---DGE--RYLLISGDYANIPAGTPHSYRMQSH-RTRLVSYT 118 (337)
T ss_dssp SEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECST-TEEEEEEE
T ss_pred eEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEECCC-CeEEEEEE
Confidence 68999999999999999999768999999999999986 355 5799999999999999999999987 68888887
Q ss_pred eCC
Q 038563 152 DSQ 154 (198)
Q Consensus 152 ~s~ 154 (198)
...
T Consensus 119 ~p~ 121 (337)
T 1y3t_A 119 MKG 121 (337)
T ss_dssp ETT
T ss_pred CCC
Confidence 654
No 69
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.25 E-value=2.7e-11 Score=105.66 Aligned_cols=76 Identities=21% Similarity=0.201 Sum_probs=67.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+.+....++||+..++|+|+ ..|++||++|+++++.+ +++ ...+++||+++||+|..|.+.|.+++++.++++.
T Consensus 99 ~l~~~~~~l~PG~~~~~H~H~-~~e~~yVl~G~g~~t~v--~g~--~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~ 173 (354)
T 2d40_A 99 TLYAGLQLIMPGEVAPSHRHN-QSALRFIVEGKGAFTAV--DGE--RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGL 173 (354)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEEEEECSSCEEEE--TTE--EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEE
T ss_pred cEEEEEEEECCCCCcCCeecC-cceEEEEEEEEEEEEEE--CCE--EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 578899999999999999995 78999999999988444 355 5799999999999999999999999999998876
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
+
T Consensus 174 d 174 (354)
T 2d40_A 174 D 174 (354)
T ss_dssp C
T ss_pred C
Confidence 4
No 70
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=99.25 E-value=5.5e-11 Score=103.43 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=65.2
Q ss_pred ceEEEEEEEeCCc-Eec--ceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 72 GMSMVRADFDVGG-VNV--PHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 72 gls~~~~~l~pg~-~~~--pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
.+++. ..+.|++ ..+ +|+|++..|++||++|++++.+.+.+|+.....|++||+++||+|.+|++.|.++++ .++
T Consensus 47 ~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l 124 (350)
T 1juh_A 47 AFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMT 124 (350)
T ss_dssp SCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEE
T ss_pred cEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEE
Confidence 46666 4555655 455 899988999999999999999876455434689999999999999999999999886 777
Q ss_pred EEEeC
Q 038563 149 GSFDS 153 (198)
Q Consensus 149 ~~~~s 153 (198)
+++..
T Consensus 125 ~v~~p 129 (350)
T 1juh_A 125 GVIVP 129 (350)
T ss_dssp EEEES
T ss_pred EEEcC
Confidence 77764
No 71
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=99.24 E-value=1.9e-10 Score=85.47 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=61.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++..++++||..... |....|++||++|++++.+ +|+ ...|++||+++||+|..|.+.|.+ +++.++.+.
T Consensus 39 ~~~~~~~~~~pG~~~~~--H~~~~E~~~Vl~G~~~~~~---~g~--~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~ 110 (119)
T 3lwc_A 39 PITIGYGRYAPGQSLTE--TMAVDDVMIVLEGRLSVST---DGE--TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVT 110 (119)
T ss_dssp CCEEEEEEECTTCEEEE--ECSSEEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEE
T ss_pred CEEEEEEEECCCCCcCc--cCCCCEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEE
Confidence 68888999999987654 4478999999999999987 366 579999999999999999999875 677777766
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
.
T Consensus 111 ~ 111 (119)
T 3lwc_A 111 Y 111 (119)
T ss_dssp E
T ss_pred C
Confidence 5
No 72
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=99.24 E-value=7.4e-11 Score=102.90 Aligned_cols=90 Identities=12% Similarity=-0.062 Sum_probs=73.5
Q ss_pred CCCeEEEEEcc-cCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEEC
Q 038563 52 ETGLASIPVNV-NVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFP 130 (198)
Q Consensus 52 ~~g~~v~~~~~-~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP 130 (198)
..|+.+..++. ...+...++ ++....|+||++.++|+|+.+ |++||++|++++.+ +++ +..+++||++++|
T Consensus 248 ~~G~~~~~~np~t~~~~~~ti--~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v---~~~--~~~~~~GD~~~vP 319 (354)
T 2d40_A 248 WDGYKMRYVNPVTGGYPMPSM--GAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII---GNE--TFSFSAKDIFVVP 319 (354)
T ss_dssp TTBEEEEECCTTTSSCSSSSC--EEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE---TTE--EEEEETTCEEEEC
T ss_pred CCCeEEEEeCCCcCCCCCCcc--eeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE---CCE--EEEEcCCCEEEEC
Confidence 35777777773 356666654 555669999999999999765 99999999999998 355 5799999999999
Q ss_pred CCCeeEEEecCCCcEEEEEEE
Q 038563 131 RGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 131 ~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++..|++.|. +++.++++.
T Consensus 320 ~~~~H~~~n~--e~~~l~~~~ 338 (354)
T 2d40_A 320 TWHGVSFQTT--QDSVLFSFS 338 (354)
T ss_dssp TTCCEEEEEE--EEEEEEEEE
T ss_pred CCCeEEEEeC--CCEEEEEEc
Confidence 9999999994 678877763
No 73
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.24 E-value=1.1e-10 Score=98.01 Aligned_cols=76 Identities=20% Similarity=0.195 Sum_probs=67.6
Q ss_pred cceEEEEEEEeCCcEecc-eeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCC-CcEEEE
Q 038563 71 LGMSMVRADFDVGGVNVP-HFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGD-TWATIL 148 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~p-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~-~~~~~~ 148 (198)
..+.+.+++++||+..+. |+|+ ..|++||++|++++.+ +++ ...|++||+++||++.+|++.|.++ +++.++
T Consensus 180 ~~~~~~~~~l~pg~~~~~~H~H~-~~E~~yVl~G~~~~~i---~~~--~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l 253 (274)
T 1sef_A 180 FDMNMHILSFEPGASHAYIETHV-QEHGAYLISGQGMYNL---DNE--WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYV 253 (274)
T ss_dssp CSEEEEEEEECTTCBCSSCBCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEECSSSCEEEE
T ss_pred CCEEEEEEEECCCCccCcceecc-CeEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCCEEEE
Confidence 468899999999999888 9995 7899999999999987 355 5799999999999999999999999 898888
Q ss_pred EEEe
Q 038563 149 GSFD 152 (198)
Q Consensus 149 ~~~~ 152 (198)
+..+
T Consensus 254 ~~~~ 257 (274)
T 1sef_A 254 YSKD 257 (274)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7754
No 74
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=99.23 E-value=1.2e-10 Score=84.68 Aligned_cols=73 Identities=12% Similarity=0.110 Sum_probs=61.5
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+.+..+.++||...++|+|+ ..|++||++|++++.+ +++ ...|++||++++|+|.+|.+.|. +++.++++.
T Consensus 37 ~~~~~~~~~~~g~~~~~H~h~-~~e~~~vl~G~~~~~i---~~~--~~~l~~Gd~i~i~~~~~H~~~~~--~~~~~~~i~ 108 (114)
T 2ozj_A 37 RVQISLFSFADGESVSEEEYF-GDTLYLILQGEAVITF---DDQ--KIDLVPEDVLMVPAHKIHAIAGK--GRFKMLQIT 108 (114)
T ss_dssp SEEEEEEEEETTSSCCCBCCS-SCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECTTCCBEEEEE--EEEEEEEEE
T ss_pred CceEEEEEECCCCccccEECC-CCeEEEEEeCEEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeC--CCcEEEEEE
Confidence 356777789999999999996 7999999999999887 355 57999999999999999999996 466666655
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
.
T Consensus 109 ~ 109 (114)
T 2ozj_A 109 L 109 (114)
T ss_dssp E
T ss_pred E
Confidence 4
No 75
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=99.20 E-value=1.1e-10 Score=88.40 Aligned_cols=72 Identities=21% Similarity=0.197 Sum_probs=60.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++..++++|| ..|||....|++||++|++++.+ +|+ ...|++||+++||+|..|.+.| .++++++.++
T Consensus 56 ~~~~~~~~~~pG---~~~~h~~~~E~~~VLeG~~~l~~---~g~--~~~l~~GD~i~~p~g~~h~~~~--~~~~~~l~v~ 125 (133)
T 2pyt_A 56 SMAAGFMQWDNA---FFPWTLNYDEIDMVLEGELHVRH---EGE--TMIAKAGDVMFIPKGSSIEFGT--PTSVRFLYVA 125 (133)
T ss_dssp SSEEEEEEEEEE---EEEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEE--EEEEEEEEEE
T ss_pred cEEEEEEEECCC---CccccCCCCEEEEEEECEEEEEE---CCE--EEEECCCcEEEECCCCEEEEEe--CCCEEEEEEE
Confidence 578888999999 45677668999999999999886 366 4699999999999999999997 4578888777
Q ss_pred eC
Q 038563 152 DS 153 (198)
Q Consensus 152 ~s 153 (198)
..
T Consensus 126 ~p 127 (133)
T 2pyt_A 126 WP 127 (133)
T ss_dssp ES
T ss_pred cC
Confidence 53
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=99.20 E-value=2.2e-10 Score=94.97 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=67.6
Q ss_pred ccceEEEEEEEeCCcEecc-eeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 70 TLGMSMVRADFDVGGVNVP-HFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~p-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
+..+.+.+++|+||+.++. |.| ..+|.+|||+|++.+.+ +++ +..|++||+++++++.+|++.|.|++++.++
T Consensus 162 ~~~~~~~~~tl~PG~~~~~~~~h-~~ee~~~vLeG~~~~~~---~~~--~~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl 235 (246)
T 1sfn_A 162 AFDFMVSTMSFAPGASLPYAEVH-YMEHGLLMLEGEGLYKL---EEN--YYPVTAGDIIWMGAHCPQWYGALGRNWSKYL 235 (246)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCC-SSCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred CCCeEEEEEEECCCCccCcccCC-CceEEEEEEECEEEEEE---CCE--EEEcCCCCEEEECCCCCEEEEcCCCCCEEEE
Confidence 4578999999999999887 556 57899999999999886 466 5799999999999999999999999999888
Q ss_pred EEEe
Q 038563 149 GSFD 152 (198)
Q Consensus 149 ~~~~ 152 (198)
..-+
T Consensus 236 ~~kd 239 (246)
T 1sfn_A 236 LYKD 239 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7654
No 77
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=99.20 E-value=1.2e-10 Score=96.12 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=65.3
Q ss_pred eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEE-ECCCCeeEEEecCCCcEEEEEEE
Q 038563 73 MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMV-FPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 73 ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~-iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
..+.+++++||...++|||+ ..|++||++|++++.+ +++ ...|++||.++ +|+|..|.+.|.++++++++.+.
T Consensus 34 ~~~~~~~~~pg~~~~~H~H~-~~e~~~Vl~G~~~~~~---~~~--~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~ 107 (243)
T 3h7j_A 34 TEVLMSYVPPHTNVEPHQHK-EVQIGMVVSGELMMTV---GDV--TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIK 107 (243)
T ss_dssp EEEEEEEECTTEEEEEECCS-SEEEEEEEESEEEEEE---TTE--EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred CEEEEEEECCCCccCCEECC-CcEEEEEEEeEEEEEE---CCE--EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEe
Confidence 46677789999999999997 7999999999999887 355 57999999885 99999999999999999988875
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
.
T Consensus 108 r 108 (243)
T 3h7j_A 108 R 108 (243)
T ss_dssp E
T ss_pred c
Confidence 4
No 78
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=99.19 E-value=1e-10 Score=97.39 Aligned_cols=77 Identities=14% Similarity=0.129 Sum_probs=67.2
Q ss_pred cceEEEEEEEeCCcEecceeC-CCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFH-PRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~H-p~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
..+.+.+++++||+....|.| +..+|++||++|++++.+ +++ ...|++||+++||++.+|.+.|.+++++.+++
T Consensus 57 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~ 131 (261)
T 1rc6_A 57 ASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA---EGK--TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFL 131 (261)
T ss_dssp CSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE---TTE--EEEEETTEEEEECTTCCCEEEECSSSCEEEEE
T ss_pred CcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 367889999999998776655 456889999999999987 356 57999999999999999999999999999998
Q ss_pred EEe
Q 038563 150 SFD 152 (198)
Q Consensus 150 ~~~ 152 (198)
+..
T Consensus 132 v~~ 134 (261)
T 1rc6_A 132 YKR 134 (261)
T ss_dssp EEE
T ss_pred EEe
Confidence 875
No 79
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=99.19 E-value=2.7e-10 Score=97.15 Aligned_cols=74 Identities=20% Similarity=0.269 Sum_probs=62.6
Q ss_pred EEEEEEeC-CcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeC
Q 038563 75 MVRADFDV-GGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDS 153 (198)
Q Consensus 75 ~~~~~l~p-g~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s 153 (198)
...+.+.| |...++|||+...|++||++|++++.+ +++ ...|++||+++||++..|++.|.++ ++.++++++.
T Consensus 219 ~~~~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i---~~~--~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~ 292 (337)
T 1y3t_A 219 IVVSSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT---DGQ--EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVP 292 (337)
T ss_dssp EEEEEEECSCCCCCCEECSSCEEEEEEEESCEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEES
T ss_pred EEEEEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE---CCE--EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcC
Confidence 34455656 567899999768999999999999987 355 5799999999999999999999998 8999998865
Q ss_pred C
Q 038563 154 Q 154 (198)
Q Consensus 154 ~ 154 (198)
.
T Consensus 293 ~ 293 (337)
T 1y3t_A 293 G 293 (337)
T ss_dssp S
T ss_pred c
Confidence 4
No 80
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.19 E-value=8.4e-11 Score=99.33 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=67.1
Q ss_pred cceEEEEEEEeCCcEe--cceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 71 LGMSMVRADFDVGGVN--VPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~--~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
..+.+.+++++||+.. +.|.| ...|++||++|++++.+. ++ ...|++||+++||+|..|.+.|.|+++++++
T Consensus 66 ~~~~~~~~~l~PG~~~~~~~h~H-~~eE~~~Vl~G~l~v~v~---g~--~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l 139 (278)
T 1sq4_A 66 ETFSQYIVELAPNGGSDKPEQDP-NAEAVLFVVEGELSLTLQ---GQ--VHAMQPGGYAFIPPGADYKVRNTTGQHTRFH 139 (278)
T ss_dssp CSCEEEEEEEEEEEEESSCCCCT-TEEEEEEEEESCEEEEES---SC--EEEECTTEEEEECTTCCEEEECCSSSCEEEE
T ss_pred CcEEEEEEEECCCCccCCCCcCC-CceEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCcEEEEECCCCCEEEE
Confidence 3689999999999976 55778 479999999999999873 55 5799999999999999999999999999998
Q ss_pred EEEe
Q 038563 149 GSFD 152 (198)
Q Consensus 149 ~~~~ 152 (198)
++..
T Consensus 140 ~v~~ 143 (278)
T 1sq4_A 140 WIRK 143 (278)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8875
No 81
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=99.14 E-value=2.3e-10 Score=100.26 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=68.2
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.|.+....++||+..++|.|. .+|+.||++|++....+ +|+ ...+++||++++|+|..|...|.|+++++++.+.
T Consensus 102 ~L~a~~~~l~PG~~~~~HrH~-~~ev~~VleG~G~~~~v--dG~--~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~ 176 (368)
T 3nw4_A 102 TMWAAIQYLGPRETAPEHRHS-QNAFRFVVEGEGVWTVV--NGD--PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGL 176 (368)
T ss_dssp SCEEEEEEECTTCEEEEEEES-SCEEEECSSCEEEEEEE--TTE--EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred ceEEEEEEECCCCccCceecc-cceEEEEEecceEEEEE--CCE--EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEec
Confidence 689999999999999999996 68999999999953333 466 5799999999999999999999999999999887
Q ss_pred eC
Q 038563 152 DS 153 (198)
Q Consensus 152 ~s 153 (198)
+.
T Consensus 177 D~ 178 (368)
T 3nw4_A 177 DI 178 (368)
T ss_dssp CH
T ss_pred ch
Confidence 53
No 82
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=99.14 E-value=1.4e-10 Score=83.45 Aligned_cols=68 Identities=18% Similarity=0.229 Sum_probs=53.4
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
..++.+.||. .++|+|+...|++||++|++++.+. + + ...|++||++++|+|..|.+.|. +++.++.+
T Consensus 30 ~~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~~---~~~--~~~l~~Gd~~~ip~~~~H~~~~~--~~~~~l~i 98 (107)
T 2i45_A 30 QFHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDFA---DGG--SMTIREGEMAVVPKSVSHRPRSE--NGCSLVLI 98 (107)
T ss_dssp EEEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEET---TSC--EEEECTTEEEEECTTCCEEEEEE--EEEEEEEE
T ss_pred EEEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEEC---CCc--EEEECCCCEEEECCCCcEeeEeC--CCeEEEEE
Confidence 4456677776 4699997669999999999998873 4 5 57999999999999999999995 45666543
No 83
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=99.14 E-value=2e-10 Score=96.48 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=66.6
Q ss_pred cceEEEEEEEeCCcEecceeC-CCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFH-PRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~H-p~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
..+.+.+++++||+....|.| +..+|++||++|++++.+ +++ ...|++||+++||++.+|.+.|.+++++.+++
T Consensus 60 ~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~---~~~--~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~ 134 (274)
T 1sef_A 60 ATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD---GQE--THELEAGGYAYFTPEMKMYLANAQEADTEVFL 134 (274)
T ss_dssp CSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC---SSC--EEEEETTEEEEECTTSCCEEEESSSSCEEEEE
T ss_pred CcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE---CCE--EEEECCCCEEEECCCCCEEEEeCCCCCEEEEE
Confidence 367889999999998766654 456889999999999887 355 57999999999999999999999999999998
Q ss_pred EEe
Q 038563 150 SFD 152 (198)
Q Consensus 150 ~~~ 152 (198)
+..
T Consensus 135 v~~ 137 (274)
T 1sef_A 135 YKK 137 (274)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 84
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.14 E-value=4.5e-10 Score=91.85 Aligned_cols=73 Identities=22% Similarity=0.263 Sum_probs=62.8
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++.++.++||...++|+|+ ..|++||++|++++.+ +++ ...|++||++++|+|.+|++.|. .+++.++.++
T Consensus 152 ~~~~~~~~~~~G~~~~~H~H~-~~e~~~Vl~G~~~~~i---~g~--~~~l~~Gd~i~ip~~~~H~~~~~-~~~~~~ll~~ 224 (227)
T 3rns_A 152 NLVMTIMSFWKGESLDPHKAP-GDALVTVLDGEGKYYV---DGK--PFIVKKGESAVLPANIPHAVEAE-TENFKMLLIL 224 (227)
T ss_dssp TEEEEEEEECTTCEEEEECCS-SEEEEEEEEEEEEEEE---TTE--EEEEETTEEEEECTTSCEEEECC-SSCEEEEEEE
T ss_pred CeEEEEEEECCCCccCCEECC-CcEEEEEEeEEEEEEE---CCE--EEEECCCCEEEECCCCcEEEEeC-CCCEEEEEEE
Confidence 578889999999999999997 6899999999999987 355 57999999999999999999993 4566666554
No 85
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=99.12 E-value=5.3e-10 Score=94.40 Aligned_cols=87 Identities=20% Similarity=0.050 Sum_probs=73.2
Q ss_pred CCCccccceEEEEEEEeCCcEecc-eeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCC
Q 038563 65 FPGLNTLGMSMVRADFDVGGVNVP-HFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDT 143 (198)
Q Consensus 65 ~P~l~~~gls~~~~~l~pg~~~~p-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~ 143 (198)
.|.-....+.+.+++|+||+.++. |.| .-+|.+|||+|++.+.+ +|+ +..|++||++.++.+..|++.|.|++
T Consensus 183 ~p~~~~~~~~~~~~~l~pG~~i~~~~~h-~~e~~~~il~G~~~~~~---~~~--~~~v~~GD~~~~~~~~~h~~~n~g~~ 256 (278)
T 1sq4_A 183 DMSDMRHDMHVNIVNFEPGGVIPFAETH-VMEHGLYVLEGKAVYRL---NQD--WVEVEAGDFMWLRAFCPQACYSGGPG 256 (278)
T ss_dssp CTTCTTCSEEEEEEEECSSSEESCCCCC-SEEEEEEEEECEEEEEE---TTE--EEEEETTCEEEEEESCCEEEECCSSS
T ss_pred cCCCcCCCeEEEEEEECCCCCcCCCCCC-CccEEEEEEeCEEEEEE---CCE--EEEeCCCCEEEECCCCCEEEEcCCCC
Confidence 354445689999999999999997 555 56899999999999876 466 67999999999999999999999999
Q ss_pred cEEEEEEEeC-CCCc
Q 038563 144 WATILGSFDS-QNPG 157 (198)
Q Consensus 144 ~~~~~~~~~s-~~pg 157 (198)
+++++.+.+- .+|.
T Consensus 257 ~~~yl~~~d~nr~~~ 271 (278)
T 1sq4_A 257 RFRYLLYKDVNRHMR 271 (278)
T ss_dssp CEEEEEEEECSSCCC
T ss_pred CEEEEEEEEcCCCcc
Confidence 9999998873 4443
No 86
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.12 E-value=3e-10 Score=95.54 Aligned_cols=105 Identities=16% Similarity=0.061 Sum_probs=78.9
Q ss_pred CCcccCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe
Q 038563 32 SLVTVEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD 111 (198)
Q Consensus 32 ~~~~~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~ 111 (198)
+.++.+|++.+.+ |+ -.+..++.+-+... +-.+.+.+++++||+..+.|.| ..+|++||++|++++.+.
T Consensus 38 avI~~~~iv~s~l--Pg---~~~~~~~vL~sP~~----G~~f~~~lv~l~PGg~s~~~~h-~~EEfiyVleG~l~l~l~- 106 (266)
T 4e2q_A 38 ALITPESHVYSPL--PD---WTNTLGAYLITPAT----GSHFVMYLAKMKEMSSSGLPPQ-DIERLIFVVEGAVTLTNT- 106 (266)
T ss_dssp EEECGGGCCCEEC--TT---SSSEEEEEEECGGG----TCSSEEEEEEECSSEECCCCCT-TEEEEEEEEEECEEEEC--
T ss_pred EEECccceEEeeC--CC---CcCEEEEEEcCCCC----CCcEEEEEEEECcCCcCCCCCC-CCeEEEEEEEEEEEEEEC-
Confidence 4445566666643 22 33455656554333 2368899999999999888877 689999999999999873
Q ss_pred CCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 112 TQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 112 ~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
+|+ .++|++||.++||++..|++.|. ++++++++..
T Consensus 107 -~g~--~~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 107 -SSS--SKKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp --CC--CEEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred -CCc--EEEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 145 47999999999999999999994 6898888854
No 87
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=99.12 E-value=7.6e-10 Score=85.73 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=59.4
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++..++++ + .+.|||...+|+.||++|++++.+ +|+ ...|++||+++||+|..|.+.|. ++++++++.
T Consensus 65 ~~s~g~~~~e-~--~~~~~~~~~eE~~yVLeG~~~l~i---~g~--~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~ 134 (151)
T 4axo_A 65 RLGCGMMEMK-E--TTFDWTLNYDEIDYVIDGTLDIII---DGR--KVSASSGELIFIPKGSKIQFSVP--DYARFIYVT 134 (151)
T ss_dssp SCEEEEEEEE-E--EEEEEECSSEEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEEc-C--ccccEeCCCcEEEEEEEeEEEEEE---CCE--EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEE
Confidence 4677777776 3 345677788999999999999986 466 57999999999999999999997 678888877
Q ss_pred eC
Q 038563 152 DS 153 (198)
Q Consensus 152 ~s 153 (198)
..
T Consensus 135 ~P 136 (151)
T 4axo_A 135 YP 136 (151)
T ss_dssp EC
T ss_pred CC
Confidence 64
No 88
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=99.12 E-value=3.2e-10 Score=88.31 Aligned_cols=73 Identities=19% Similarity=0.204 Sum_probs=59.7
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEe--cEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLE--GKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~--G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
..+++.++++ +...++|||+...|++||++ |++++.+ +|+ .+.|++||+++||+|..|++.+ +++++
T Consensus 45 fp~sv~~v~~--g~~~~~H~H~~~~E~~yVLe~~G~g~v~i---dge--~~~l~~GD~v~IPpg~~H~i~g----~l~~L 113 (157)
T 4h7l_A 45 TSVSVHYTQI--TKAARTHYHREHQEIYVVLDHAAHATIEL---NGQ--SYPLTKLLAISIPPLVRHRIVG----EATII 113 (157)
T ss_dssp CSCEEEEEEE--CSCCCCBBCSSCEEEEEEEEECTTCEEEE---TTE--EEECCTTEEEEECTTCCEEEES----CEEEE
T ss_pred CcEEEEEEeC--CCCccceECCCCcEEEEEEecCcEEEEEE---CCE--EEEeCCCCEEEECCCCeEeeEC----CEEEE
Confidence 3456665555 45568999988889999999 9999987 366 5799999999999999999973 69999
Q ss_pred EEEeCC
Q 038563 149 GSFDSQ 154 (198)
Q Consensus 149 ~~~~s~ 154 (198)
+++...
T Consensus 114 ~I~~Pp 119 (157)
T 4h7l_A 114 NIVSPP 119 (157)
T ss_dssp EEEESS
T ss_pred EEECCC
Confidence 988753
No 89
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.11 E-value=3.7e-10 Score=99.80 Aligned_cols=77 Identities=16% Similarity=0.111 Sum_probs=68.4
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEe-cCCCcEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMN-VGDTWATILG 149 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N-~g~~~~~~~~ 149 (198)
-.+.+....++||+..++|.|. ..|+.||++|++.+..+ +|+ ...+++||++++|+|..|...| .|++++++++
T Consensus 121 ~~L~a~~~~l~PG~~~~~HrH~-~~ev~~IleG~G~~t~v--~G~--~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~ 195 (394)
T 3bu7_A 121 GWLFSGIQTMKAGERAGAHRHA-ASALRFIMEGSGAYTIV--DGH--KVELGANDFVLTPNGTWHEHGILESGTECIWQD 195 (394)
T ss_dssp TTBEEEEEEECTTCBCCCEEES-SCEEEEEEECSCEEEEE--TTE--EEEECTTCEEEECTTCCEEEEECTTCCCEEEEE
T ss_pred CeeEEEEEEECCCCCcCCccCC-cceEEEEEEeeEEEEEE--CCE--EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEE
Confidence 3788999999999999999996 56999999999876444 466 5799999999999999999999 9999999998
Q ss_pred EEe
Q 038563 150 SFD 152 (198)
Q Consensus 150 ~~~ 152 (198)
+++
T Consensus 196 v~d 198 (394)
T 3bu7_A 196 GLD 198 (394)
T ss_dssp EEC
T ss_pred ccc
Confidence 774
No 90
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=99.11 E-value=8.5e-10 Score=77.84 Aligned_cols=59 Identities=29% Similarity=0.443 Sum_probs=49.0
Q ss_pred cEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 84 GVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 84 ~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
+..++|+|+...|++||++|++++.+. ++ ...|++||++++|+|..|.+.|.+ ++.++.
T Consensus 40 ~~~~~H~H~~~~e~~~v~~G~~~~~~~---~~--~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~ 98 (102)
T 3d82_A 40 GEFVWHEHADTDEVFIVMEGTLQIAFR---DQ--NITLQAGEMYVIPKGVEHKPMAKE--ECKIMI 98 (102)
T ss_dssp EECCCBCCTTCCEEEEEEESEEEEECS---SC--EEEEETTEEEEECTTCCBEEEEEE--EEEEEE
T ss_pred CCCCceeCCCCcEEEEEEeCEEEEEEC---CE--EEEEcCCCEEEECCCCeEeeEcCC--CCEEEE
Confidence 468999997669999999999998763 55 578999999999999999999974 444443
No 91
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=99.10 E-value=6.4e-10 Score=81.38 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=58.4
Q ss_pred ceEEEEEEEeCCcEecc---eeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCC-cEEE
Q 038563 72 GMSMVRADFDVGGVNVP---HFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDT-WATI 147 (198)
Q Consensus 72 gls~~~~~l~pg~~~~p---H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~-~~~~ 147 (198)
+..+.++. .+|...++ |.| ...|++||++|++++.+. ++.....|++||+++||+|..|.+.|.+++ ++.+
T Consensus 30 ~~~i~~i~-~~g~~~~~~~~~~~-~~~E~~~Vl~G~~~l~~~---~~~~~~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~ 104 (112)
T 2opk_A 30 GLKIERII-SNGQASPPGFWYDS-PQDEWVMVVSGSAGIECE---GDTAPRVMRPGDWLHVPAHCRHRVAWTDGGEPTVW 104 (112)
T ss_dssp TEEEEEEE-ESSCCCCTTCCBCC-SSEEEEEEEESCEEEEET---TCSSCEEECTTEEEEECTTCCEEEEEECSSSCEEE
T ss_pred CEEEEEEE-eCCccCCCCccccC-CccEEEEEEeCeEEEEEC---CEEEEEEECCCCEEEECCCCcEEEEeCCCCCCEEE
Confidence 56777664 55655555 444 689999999999999874 342015899999999999999999999976 6777
Q ss_pred EEEEe
Q 038563 148 LGSFD 152 (198)
Q Consensus 148 ~~~~~ 152 (198)
++++.
T Consensus 105 l~v~~ 109 (112)
T 2opk_A 105 LAVHC 109 (112)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 92
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=99.09 E-value=6.4e-10 Score=90.60 Aligned_cols=75 Identities=15% Similarity=0.083 Sum_probs=66.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+.+.++.++||...|.|.|+ .+|++|||+|++++.+. +++ .+.+++||++++|+|..|.+. ++++|+.++.+.
T Consensus 131 ~l~lG~v~l~PG~~yP~HsHp-~EEiy~VLsG~~e~~v~--~g~--~~~l~pGd~v~ipsgv~Ha~r-t~dePllalwvW 204 (217)
T 4b29_A 131 SLRVTVGYWGPGLDYGWHEHL-PEELYSVVSGRALFHLR--NAP--DLMLEPGQTRFHPANAPHAMT-TLTDPILTLVLW 204 (217)
T ss_dssp SCEEEEEEECSSCEEEEEECS-SEEEEEEEEECEEEEET--TSC--CEEECTTCEEEECTTCCEEEE-CCSSCEEEEEEE
T ss_pred eEEEEEEEECCCCcCCCCCCC-CceEEEEEeCCEEEEEC--CCC--EEecCCCCEEEcCCCCceeEE-ECCccEEEEEEE
Confidence 688999999999999999997 79999999999998873 244 579999999999999999998 589999888777
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
.
T Consensus 205 ~ 205 (217)
T 4b29_A 205 R 205 (217)
T ss_dssp E
T ss_pred e
Confidence 5
No 93
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=99.09 E-value=9.9e-10 Score=89.80 Aligned_cols=74 Identities=7% Similarity=-0.086 Sum_probs=65.1
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++.+.++.++||...++|.|| ..|++||++|++++.+. |+ ...|++||++++|+|.+|.+.|. +++.++.++
T Consensus 36 ~~~~~~~~~~~G~~~~~h~h~-~~~~~~Vl~G~~~~~i~---~~--~~~l~~Gd~~~~p~~~~H~~~a~--~~~~~l~i~ 107 (227)
T 3rns_A 36 NSYISLFSLAKDEEITAEAML-GNRYYYCFNGNGEIFIE---NN--KKTISNGDFLEITANHNYSIEAR--DNLKLIEIG 107 (227)
T ss_dssp SEEEEEEEECTTCEEEECSCS-SCEEEEEEESEEEEEES---SC--EEEEETTEEEEECSSCCEEEEES--SSEEEEEEE
T ss_pred CcEEEEEEECCCCccCccccC-CCEEEEEEeCEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEEC--CCcEEEEEE
Confidence 578899999999999999996 79999999999999873 55 57999999999999999999985 568888776
Q ss_pred eC
Q 038563 152 DS 153 (198)
Q Consensus 152 ~s 153 (198)
..
T Consensus 108 ~~ 109 (227)
T 3rns_A 108 EK 109 (227)
T ss_dssp EC
T ss_pred ee
Confidence 53
No 94
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=99.09 E-value=1.6e-09 Score=95.83 Aligned_cols=93 Identities=20% Similarity=0.132 Sum_probs=73.1
Q ss_pred CCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCC
Q 038563 53 TGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRG 132 (198)
Q Consensus 53 ~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G 132 (198)
.|..+..++... .+-....+.+....++||+..++|.|. ..|++||++|++++.+ +|+ ...+++||++++|+|
T Consensus 275 ~~~~l~l~nP~~-g~~~~~tl~~~~~~l~PG~~~~~HrH~-~~~v~~VleG~G~~~V---~ge--~~~~~~GD~~~iP~g 347 (394)
T 3bu7_A 275 DGLILRYTNPQT-GGHPMLTMGASMQMLRPGEHTKAHRHT-GNVIYNVAKGQGYSIV---GGK--RFDWSEHDIFCVPAW 347 (394)
T ss_dssp TBEEEEECCTTT-SSCSSSSCEEEEEEECTTCBCCCEEES-SCEEEEEEECCEEEEE---TTE--EEEECTTCEEEECTT
T ss_pred CceEEEEeCCCC-CCCCCCeeeEEEEEECCCCcCCCcccC-CcEEEEEEeCeEEEEE---CCE--EEEEeCCCEEEECCC
Confidence 344455555332 222223578888899999999999996 6799999999998776 466 579999999999999
Q ss_pred CeeEEEecC-CCcEEEEEEEe
Q 038563 133 LVHFQMNVG-DTWATILGSFD 152 (198)
Q Consensus 133 ~~H~~~N~g-~~~~~~~~~~~ 152 (198)
..|.+.|.| ++++.++++.+
T Consensus 348 ~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 348 TWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp CCEEEEECCSSCCEEEEEEES
T ss_pred CeEEeEeCCCCCCeEEEEeeC
Confidence 999999999 78998887743
No 95
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=99.04 E-value=2.2e-09 Score=90.21 Aligned_cols=75 Identities=16% Similarity=0.180 Sum_probs=66.4
Q ss_pred ccceEEEEEEEeCCcEecc-eeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 70 TLGMSMVRADFDVGGVNVP-HFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 70 ~~gls~~~~~l~pg~~~~p-H~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
...+.+.+++++||+.++. |+|. .+|.+|||+|++.+.+ +++ +..+++||+++++++.+|++.|.|++++.+|
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~-~eh~~~vL~G~g~y~l---~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl 256 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHY-NQHGLLLLEGQGIYRL---GDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYL 256 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCS-CCEEEEEEECEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEE
T ss_pred ccceEEEEEEECCCcCcCCceEcc-cceEEEEEeceEEEEE---CCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 4478899999999999996 7774 6799999999999886 466 6799999999999999999999999999887
Q ss_pred EE
Q 038563 149 GS 150 (198)
Q Consensus 149 ~~ 150 (198)
.-
T Consensus 257 ~y 258 (266)
T 4e2q_A 257 LY 258 (266)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 96
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=99.02 E-value=4e-09 Score=84.62 Aligned_cols=87 Identities=21% Similarity=0.263 Sum_probs=69.6
Q ss_pred eEEEEEEEeCCc----------EecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCC
Q 038563 73 MSMVRADFDVGG----------VNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGD 142 (198)
Q Consensus 73 ls~~~~~l~pg~----------~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~ 142 (198)
.+.-.+.+.|+. ..+.|+|+. .|++||++|++.+.+.+.+++.+...+++||+++||+|..|++.+..+
T Consensus 74 ~~~D~v~~~p~~~p~~~~k~~~~~~~H~H~~-~Ei~yVleG~G~f~i~d~~d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 74 SWMDIITICKDTLPNYEEKIKMFFEEHLHLD-EEIRYILEGSGYFDVRDKEDKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp CEEEEEEESTTTSTTHHHHHHHHHSCEECSS-CEEEEEEEEEEEEEEECTTSCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred CceeEEEECCCcCcchhhhhccCCcceECCc-ceEEEEEeceEEEEECCCCCeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 355556777775 248899975 899999999999998876566666799999999999999999998777
Q ss_pred CcEEEEEEEeCCCCceeee
Q 038563 143 TWATILGSFDSQNPGLQKI 161 (198)
Q Consensus 143 ~~~~~~~~~~s~~pg~~~~ 161 (198)
.....+-+|.. .|++.-.
T Consensus 153 ~~~~airlF~~-~~~W~~~ 170 (191)
T 1vr3_A 153 NYVKAMRLFVG-EPVWTPY 170 (191)
T ss_dssp CCEEEEEEESS-SCCCCCE
T ss_pred CCEEEEEEECC-CCCccCC
Confidence 77888888875 4666543
No 97
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=98.95 E-value=6.9e-09 Score=73.99 Aligned_cols=76 Identities=14% Similarity=0.204 Sum_probs=63.7
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCC-CCceeeech---hhhccCCCHHHHHHHhCCCHHHHHHHhh
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQ-NPGLQKIPS---AVFGSNIKEELLEKAFGLTPKEIAKLRK 191 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~-~pg~~~~~~---~~f~~~~p~~vla~af~v~~~~v~~l~~ 191 (198)
.+...|++||+++||+|.+-...+.. .+.+++.-.+. ++....++. +++. ++|.++|+.+|+++.+++++|+.
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~-~l~~evla~aF~~s~ee~~~l~~ 81 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIR-QIPRQVSDLTFPGSGEEVEELLE 81 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTT-TSCHHHHHHHSSSCTHHHHHHTT
T ss_pred hhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHH-hCCHHHHHHHcCCCHHHHHHHHh
Confidence 34678999999999999999999874 48887764444 788888864 7887 89999999999999999999987
Q ss_pred hcC
Q 038563 192 RFA 194 (198)
Q Consensus 192 ~~~ 194 (198)
...
T Consensus 82 ~q~ 84 (93)
T 1dgw_Y 82 NQK 84 (93)
T ss_dssp SCC
T ss_pred cCC
Confidence 654
No 98
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=98.90 E-value=8.1e-09 Score=74.52 Aligned_cols=62 Identities=24% Similarity=0.252 Sum_probs=49.8
Q ss_pred EEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcE
Q 038563 77 RADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWA 145 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~ 145 (198)
...+.||.. +.| | ...|++||++|++++.+. +++ ...|++||+++||+|.+|.+.|.++...
T Consensus 35 ~~~~~pg~~-~~h-H-~~~E~~~Vl~G~~~~~i~--~g~--~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 35 IWEKEVSEF-DWY-Y-DTNETCYILEGKVEVTTE--DGK--KYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp EEEECSEEE-EEE-C-SSCEEEEEEEEEEEEEET--TCC--EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeCCCcc-ccc-C-CceEEEEEEeCEEEEEEC--CCC--EEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 567888764 356 6 479999999999998872 145 4799999999999999999999766543
No 99
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=98.90 E-value=6.4e-09 Score=81.08 Aligned_cols=87 Identities=14% Similarity=0.110 Sum_probs=68.2
Q ss_pred CCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCC
Q 038563 53 TGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRG 132 (198)
Q Consensus 53 ~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G 132 (198)
.|.+++.+... +. .+..+.+++++||+..++|+|+ ..|.+|||+|++.+ +++++ .+++||.++.|+|
T Consensus 27 ~Gv~~~~L~~d--~~---~g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~---~e~~~----~~~~Gd~~~~P~g 93 (159)
T 3ebr_A 27 NDVMVKYFKID--PV---RGETITLLKAPAGMEMPRHHHT-GTVIVYTVQGSWRY---KEHDW----VAHAGSVVYETAS 93 (159)
T ss_dssp SSSEEEEEEEE--TT---TTEEEEEEEECSSCBCCCEEES-SCEEEEEEESCEEE---TTSSC----CBCTTCEEEECSS
T ss_pred CCEEEEEeeEc--CC---CCeEEEEEEECCCCCcccccCC-CCEEEEEEEeEEEE---eCCCe----EECCCeEEEECCC
Confidence 45666665421 11 1567888999999999999996 58889999999874 33342 6899999999999
Q ss_pred CeeEEEec--CCCcEEEEEEEe
Q 038563 133 LVHFQMNV--GDTWATILGSFD 152 (198)
Q Consensus 133 ~~H~~~N~--g~~~~~~~~~~~ 152 (198)
..|...+. ++++++++.+..
T Consensus 94 ~~H~~~~~~~~~e~~~~~~~~~ 115 (159)
T 3ebr_A 94 TRHTPQSAYAEGPDIITFNIVA 115 (159)
T ss_dssp EEECEEESSSSSSCEEEEEEEE
T ss_pred CcceeEeCCCCCCCEEEEEEec
Confidence 99999998 778998888654
No 100
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=98.88 E-value=8.6e-09 Score=85.26 Aligned_cols=71 Identities=15% Similarity=0.167 Sum_probs=61.7
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+.+.+++++||+....|. .+|++||++|++++.+. ++ ...|++||+++||++..|.+.|. +++.++++.
T Consensus 49 ~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~~---~~--~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v~ 118 (246)
T 1sfn_A 49 RFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAVG---GE--TRTLREYDYVYLPAGEKHMLTAK--TDARVSVFE 118 (246)
T ss_dssp SSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEECS---SC--EEEECTTEEEEECTTCCCEEEEE--EEEEEEEEE
T ss_pred cEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEEC---CE--EEEECCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 6788999999999887774 78999999999998863 55 57999999999999999999998 778877776
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
.
T Consensus 119 ~ 119 (246)
T 1sfn_A 119 K 119 (246)
T ss_dssp E
T ss_pred e
Confidence 3
No 101
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=98.83 E-value=1.8e-08 Score=80.92 Aligned_cols=70 Identities=19% Similarity=0.151 Sum_probs=60.5
Q ss_pred eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 73 MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 73 ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
..+.+++++||+..+.|+|+ ..|+.|||+|++. ++. .++.+||++.+|.|..|...+.+++.+.++++.+
T Consensus 125 ~~v~l~~~~pG~~~p~H~H~-g~E~~~VL~G~f~----de~-----~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 125 AIARLLWIPGGQAVPDHGHR-GLELTLVLQGAFR----DET-----DRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SEEEEEEECTTCBCCCCCCS-SCEEEEEEESEEE----CSS-----SEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred cEEEEEEECCCCCCCCcCCC-CeEEEEEEEEEEE----CCc-----EEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 46678899999999999995 7899999999965 332 3679999999999999999998788999988764
No 102
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=98.83 E-value=1.2e-08 Score=76.17 Aligned_cols=74 Identities=11% Similarity=0.056 Sum_probs=57.9
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+++..+++.||... .|+|. ..|++|||+|++++.+ ++|+ ...|++||+++||+|..|.+.|.+... .+++++
T Consensus 48 ~~~~g~w~~~pG~~~-~~~~~-~~E~~~Vl~G~~~l~~--~~g~--~~~l~~GD~~~ip~g~~h~~~~~~~~r-K~yv~~ 120 (123)
T 3bcw_A 48 KVESGVWESTSGSFQ-SNTTG-YIEYCHIIEGEARLVD--PDGT--VHAVKAGDAFIMPEGYTGRWEVDRHVK-KIYFVT 120 (123)
T ss_dssp TEEEEEEEEEEEEEE-CCCTT-EEEEEEEEEEEEEEEC--TTCC--EEEEETTCEEEECTTCCCEEEEEEEEE-EEEEEE
T ss_pred CEEEEEEEECCCcee-eEcCC-CcEEEEEEEEEEEEEE--CCCe--EEEECCCCEEEECCCCeEEEEECCcee-EEEEEE
Confidence 478888899998765 46663 3899999999999875 3466 468999999999999999999986543 455544
Q ss_pred e
Q 038563 152 D 152 (198)
Q Consensus 152 ~ 152 (198)
.
T Consensus 121 ~ 121 (123)
T 3bcw_A 121 H 121 (123)
T ss_dssp E
T ss_pred e
Confidence 3
No 103
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=98.82 E-value=2.9e-09 Score=84.60 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=57.6
Q ss_pred ecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCCCCcee
Q 038563 86 NVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQ 159 (198)
Q Consensus 86 ~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~ 159 (198)
.++|+|+ ..|+.||++|++.+.+. .+++.+...+++||+++||+|..|++.+..+.....+-+|... |++.
T Consensus 93 ~~~H~H~-~~Ei~~Vl~G~g~~~i~-~~d~~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~-~~w~ 163 (179)
T 1zrr_A 93 LNEHTHG-EDEVRFFVEGAGLFCLH-IGDEVFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP-EGWI 163 (179)
T ss_dssp HSCBEES-SCEEEEEEESCCCCCEE-CSSCEEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG-GGEE
T ss_pred ccceECC-hheEEEEEcceEEEEEE-eCCEEEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC-CCcc
Confidence 4789997 48999999999998875 3466666789999999999999999988666667777777654 6654
No 104
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=98.81 E-value=7.6e-09 Score=79.19 Aligned_cols=76 Identities=13% Similarity=-0.032 Sum_probs=58.5
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeE-EEEEEeCCcEEEECCCCeeE-EEecCCCcEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRI-FAKVIEKGEVMVFPRGLVHF-QMNVGDTWATILG 149 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~l~~Gd~~~iP~G~~H~-~~N~g~~~~~~~~ 149 (198)
|-.+.+++++||+..++|+|+ ..|.+|||+|+++.. ++.. ....+++||.+++|+|..|. ..+ .+.+.++.
T Consensus 43 g~~~~~~~~~pG~~~p~H~H~-~~ee~~VL~G~~~~~----~g~~~~~~~~~~Gd~~~~p~g~~H~p~~~--~e~~~~l~ 115 (145)
T 2o1q_A 43 GSWTAIFDCPAGSSFAAHVHV-GPGEYFLTKGKMDVR----GGKAAGGDTAIAPGYGYESANARHDKTEF--PVASEFYM 115 (145)
T ss_dssp TEEEEEEEECTTEEECCEEES-SCEEEEEEEEEEEET----TCGGGTSEEEESSEEEEECTTCEESCCEE--EEEEEEEE
T ss_pred ccEEEEEEECCCCCCCccCCC-CCEEEEEEEeEEEEc----CCCEecceEeCCCEEEEECcCCccCCeEC--CCCeEEEE
Confidence 446778999999999999997 466699999999843 2321 12589999999999999999 443 45577777
Q ss_pred EEeCC
Q 038563 150 SFDSQ 154 (198)
Q Consensus 150 ~~~s~ 154 (198)
+++..
T Consensus 116 ~~~gp 120 (145)
T 2o1q_A 116 SFLGP 120 (145)
T ss_dssp EEESC
T ss_pred EECCc
Confidence 77643
No 105
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=98.79 E-value=8.1e-08 Score=75.93 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=62.5
Q ss_pred eEEEEEEEeCCcEecceeCCC------CCEEEEEEecEEEEEEEeCCCeE------------------EEEEEeCCcEEE
Q 038563 73 MSMVRADFDVGGVNVPHFHPR------ATEIAVVLEGKIYSGFVDTQNRI------------------FAKVIEKGEVMV 128 (198)
Q Consensus 73 ls~~~~~l~pg~~~~pH~Hp~------a~Ei~yVl~G~~~~~~~~~~~~~------------------~~~~l~~Gd~~~ 128 (198)
....++.+.||...|.|.|+. -.|-++|++|++++.+.+ .+. -...|++||.+.
T Consensus 53 Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~ivr~G~v~l~~~g--~~~~~~~v~v~dg~~~~~~a~~~i~L~pGesvt 130 (175)
T 2y0o_A 53 YCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEG--EKTPLPKVLPPQEDREHYTVWHEIELEPGGQYT 130 (175)
T ss_dssp EEEEEEEECTTCEEEEEECCCCTTSCCCCEEEEEEEEEEEEEESS--SCCSSCSCCCCGGGGGGCCCCEEEEECTTCEEE
T ss_pred ceEEEEEECCCCcCCceECCCCCCCCCCceeEEEecCEEEEEECC--ccccCcceeccCCceeeecCCcEEEECCCCEEE
Confidence 677888999999999999998 899999999999987732 111 135899999999
Q ss_pred ECCCCeeEEEecCCCcEEEEEEEeCCC
Q 038563 129 FPRGLVHFQMNVGDTWATILGSFDSQN 155 (198)
Q Consensus 129 iP~G~~H~~~N~g~~~~~~~~~~~s~~ 155 (198)
+|+|..|+++| +.+. +++.-+++.+
T Consensus 131 Ippg~~H~f~a-geeg-vli~EvSt~~ 155 (175)
T 2y0o_A 131 IPPNTKHWFQA-GEEG-AVVTEMSSTS 155 (175)
T ss_dssp ECTTCCEEEEE-EEEE-EEEEEEEECC
T ss_pred ECCCCcEEEEe-CCCC-EEEEEEeCCC
Confidence 99999999999 3444 4455555443
No 106
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=98.75 E-value=4.2e-08 Score=76.91 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=59.3
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecC--CCcEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVG--DTWATILG 149 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g--~~~~~~~~ 149 (198)
+..+.+++++||+..++|+|+ ..|.+|||+|++... ..+. ..+++||.++.|+|..|...+.. +++++.++
T Consensus 42 g~~v~lvr~~pG~~~p~H~H~-g~ee~~VL~G~f~~~---~~~~---~~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~ 114 (165)
T 3cjx_A 42 GLMVMRASFAPGLTLPLHFHT-GTVHMYTISGCWYYT---EYPG---QKQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIF 114 (165)
T ss_dssp TEEEEEEEECTTCBCCEEEES-SCEEEEEEESEEEET---TCTT---SCEETTEEEEECTTCEECEECCTTCSSCEEEEE
T ss_pred CcEEEEEEECCCCcCCcccCC-CCEEEEEEEEEEEEC---CCce---EEECCCeEEEeCCCCceeeEeCCCCCCCcEEEE
Confidence 567888999999999999996 689999999998752 2112 36799999999999999999864 33776666
Q ss_pred EEe
Q 038563 150 SFD 152 (198)
Q Consensus 150 ~~~ 152 (198)
+.+
T Consensus 115 v~~ 117 (165)
T 3cjx_A 115 MLS 117 (165)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 107
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.74 E-value=2.4e-07 Score=72.99 Aligned_cols=85 Identities=19% Similarity=0.274 Sum_probs=72.4
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe-CCCe---EEEEEEeCCcEEEECCCCeeEEEecCCCcEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD-TQNR---IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATI 147 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~-~~~~---~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~ 147 (198)
+.++..+...||...++|-|..+..+++|++|+++..+.+ ++++ .....+++||++++|++.+|.+.|.++++++-
T Consensus 68 ~~~v~~l~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~~~~~~~~~~l~~G~~~~~~~~~iH~V~N~~~~~aVS 147 (171)
T 3eqe_A 68 ELEIIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVS 147 (171)
T ss_dssp SCEEEEEEECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSSSEEEEEEEEEETTCEEEECTTCEEEEECCSSSCEEE
T ss_pred CeEEEEEEECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCCceeecceEEeCCCcEEEeCCCCEEEEECCCCCCEEE
Confidence 5688889999999999999987889999999999987653 2231 13578999999999999999999999999999
Q ss_pred EEEEeCCCC
Q 038563 148 LGSFDSQNP 156 (198)
Q Consensus 148 ~~~~~s~~p 156 (198)
|-+++.+..
T Consensus 148 lHvY~pp~~ 156 (171)
T 3eqe_A 148 LHVYSPPLE 156 (171)
T ss_dssp EEEEESCCC
T ss_pred EEEeCCCcc
Confidence 999986543
No 108
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=98.67 E-value=2.5e-07 Score=79.38 Aligned_cols=83 Identities=24% Similarity=0.231 Sum_probs=66.7
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC-CeEEEEEEeC-C---cEEEECCCCeeEEEecCCCcEEEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ-NRIFAKVIEK-G---EVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~-~~~~~~~l~~-G---d~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
....++.||.....|||....|.++|++|++.+.+.+.. ++. ..+.. | +.++||+|..|.+.|.|+++++++.
T Consensus 274 ~~ls~~~~g~~rg~h~h~~~~e~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ip~g~~h~~~n~~~~~~~~~~ 351 (369)
T 3st7_A 274 VSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEI--IEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIM 351 (369)
T ss_dssp EEEEEECTTCEEEEEECSSCCEEEEEEESEEEEEEEETTCCCC--EEEEEETTBCCEEEECTTEEEEEEECSSSCEEEEE
T ss_pred EEEEEecCCceeccccccCcceEEEEEeeeEEEEEEcCCCCcE--EEEEecCCcceEEEeCCCceEEeEEcCCCcEEEEE
Confidence 344578999999999999999999999999998877544 453 45555 7 9999999999999999999998877
Q ss_pred EEe----CCCCcee
Q 038563 150 SFD----SQNPGLQ 159 (198)
Q Consensus 150 ~~~----s~~pg~~ 159 (198)
.-+ .++|.++
T Consensus 352 ~~~~~y~~~~~d~~ 365 (369)
T 3st7_A 352 WVNEMFDPNQPDTY 365 (369)
T ss_dssp EESSCCCSSSCCCE
T ss_pred ecCcccCCCCCccc
Confidence 654 3445544
No 109
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=98.67 E-value=1.1e-07 Score=82.52 Aligned_cols=77 Identities=13% Similarity=0.113 Sum_probs=62.4
Q ss_pred cccceEEEEEEEeC---CcEecceeCCCCCEEEEEEecEEEEEEEeCCC-eEEEEEEeCCcEEEECCCCeeEEEecCCCc
Q 038563 69 NTLGMSMVRADFDV---GGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-RIFAKVIEKGEVMVFPRGLVHFQMNVGDTW 144 (198)
Q Consensus 69 ~~~gls~~~~~l~p---g~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~ 144 (198)
+....++.++++.+ |+.++.|.|+ ..|++||++|++++.+. | + ...|++||+++||+|.+|.+.|.++.
T Consensus 245 ~~~~f~~~~i~~~~~~~g~~~~~h~~~-~~~~~~vleG~~~i~i~---g~~--~~~l~~Gd~~~iPag~~h~~~~~~~~- 317 (350)
T 1juh_A 245 QDTNYTLSTISMSTTPSTVTVPTWSFP-GACAFQVQEGRVVVQIG---DYA--ATELGSGDVAFIPGGVEFKYYSEAYF- 317 (350)
T ss_dssp GGGCEEEEEEEECCCCTTSCCCCBCCS-SCEEEEEEESCEEEEET---TSC--CEEECTTCEEEECTTCCEEEEESSSS-
T ss_pred ceeEEEEEEEeeccccCCCCCCcccCC-CcEEEEEEeeEEEEEEC---CeE--EEEeCCCCEEEECCCCCEEEEecCCe-
Confidence 33356888888888 4478889895 79999999999999984 5 4 46999999999999999999998655
Q ss_pred EEEEEEEe
Q 038563 145 ATILGSFD 152 (198)
Q Consensus 145 ~~~~~~~~ 152 (198)
+.++.+.+
T Consensus 318 ~~~l~~~~ 325 (350)
T 1juh_A 318 SKVLFVSS 325 (350)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEec
Confidence 66666554
No 110
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=98.64 E-value=2.8e-07 Score=72.41 Aligned_cols=67 Identities=13% Similarity=0.097 Sum_probs=54.3
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecC
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVG 141 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g 141 (198)
.+.++ ..-.|++....|.| ..+|++||++|++.+.+.+. |+.....|++||++++|+|..|.-...+
T Consensus 35 ~~~V~-~v~Gpn~r~d~H~h-~~dE~FyvlkG~m~i~v~d~-g~~~~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 35 DFIVT-VVGGPNHRTDYHDD-PLEEFFYQLRGNAYLNLWVD-GRRERADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp SEEEE-EECSCBCCCCEEEC-SSCEEEEEEESCEEEEEEET-TEEEEEEECTTCEEEECTTCCEEEEBCC
T ss_pred cEEEE-EEcCCCcCccCcCC-CCceEEEEEeeEEEEEEEcC-CceeeEEECCCCEEEeCCCCCcCccccC
Confidence 44443 24556777899988 58999999999999999874 5445689999999999999999987755
No 111
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=98.63 E-value=9.5e-08 Score=73.99 Aligned_cols=108 Identities=11% Similarity=0.002 Sum_probs=73.1
Q ss_pred CCCcccCceEEeccccCCCcC--CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEE
Q 038563 31 SSLVTVEDFVFSGIKFRGKFS--ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSG 108 (198)
Q Consensus 31 ~~~~~~~df~~~~~~~~~~~~--~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~ 108 (198)
...+..++..|. +.+.. ..|.+.+.+- .-|. .|-...+++++||+..++|+|+ ..|.+|||+|++...
T Consensus 11 ~~~v~~d~~~W~----p~P~~l~~~Gv~~k~L~--~~~e---~g~~t~lvr~~pG~~~p~H~H~-g~ee~~VL~G~~~~~ 80 (153)
T 3bal_A 11 EEYVKISDNNYV----PFPEAFSDGGITWQLLH--SSPE---TSSWTAIFNCPAGSSFASHIHA-GPGEYFLTKGKMEVR 80 (153)
T ss_dssp CEEEECCGGGCE----ECCGGGEESCCEEEEEE--EETT---TTEEEEEEEECTTEEECCEEES-SCEEEEEEESEEEET
T ss_pred ceEEccccCcee----cCCCccCCCCeEEEEEE--ECCc---cceEEEEEEeCCCCCccCccCC-CCEEEEEEEEEEEec
Confidence 345566666666 22211 3467777773 3342 3788889999999999999997 678899999998754
Q ss_pred EEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 109 FVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 109 ~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
..+. .....+++|+.++.|+|..|+..-. ++..+++.++.
T Consensus 81 ~Gd~---~~~~~~~aGsYv~ePpGs~H~p~~~-~~~~~~~~~~~ 120 (153)
T 3bal_A 81 GGEQ---EGGSTAYAPSYGFESSGALHGKTFF-PVESQFYMTFL 120 (153)
T ss_dssp TCGG---GTSEEEESSEEEEECTTCEESCCEE-SSCEEEEEEEE
T ss_pred Cccc---cCccccCCCeEEEcCCCCcccceeC-CCCeEEEEEEE
Confidence 3211 0135779999999999999985432 33444454444
No 112
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=98.58 E-value=3.3e-07 Score=80.21 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=68.9
Q ss_pred CeE-EEEEccc-CCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECC
Q 038563 54 GLA-SIPVNVN-VFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPR 131 (198)
Q Consensus 54 g~~-v~~~~~~-~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~ 131 (198)
|.. +..+|.. .-+... -|++....|+||...++|-|. ++++++|++|++++.+ +++ ++..++||+|++|+
T Consensus 260 g~~~~~y~NP~tg~~~~p--ti~~~~~~L~pG~~t~~hRht-~s~Vy~V~eG~G~~~I---~~~--~~~w~~gD~fvvP~ 331 (368)
T 3nw4_A 260 GHAAIRYVNPTTGGDVMP--TLRCEFHRLRAGTETATRNEV-GSTVFQVFEGAGAVVM---NGE--TTKLEKGDMFVVPS 331 (368)
T ss_dssp TEEEEECBCTTTSSBSSS--SCEEEEEEECTTCBCCCEEES-SCEEEEEEESCEEEEE---TTE--EEEECTTCEEEECT
T ss_pred ceEEEEEeCCCCCCCcch--hHHhheEEECCCCccCCeecc-ccEEEEEEeCcEEEEE---CCE--EEEecCCCEEEECC
Confidence 555 5566533 233344 456666789999999999995 7899999999999987 355 57999999999999
Q ss_pred CCeeEEEecCCCcEEEEEEE
Q 038563 132 GLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 132 G~~H~~~N~g~~~~~~~~~~ 151 (198)
+..|...|. +++.+|.+-
T Consensus 332 w~~h~~~n~--~~a~Lf~~~ 349 (368)
T 3nw4_A 332 WVPWSLQAE--TQFDLFRFS 349 (368)
T ss_dssp TCCEEEEES--SSEEEEEEE
T ss_pred CCcEEEEeC--CCEEEEEEe
Confidence 999999996 577776653
No 113
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=98.53 E-value=1e-06 Score=71.46 Aligned_cols=81 Identities=21% Similarity=0.182 Sum_probs=68.9
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe--CCCeE----EEEEEeCCcEEEECC--CCeeEEEec-CC
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD--TQNRI----FAKVIEKGEVMVFPR--GLVHFQMNV-GD 142 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~--~~~~~----~~~~l~~Gd~~~iP~--G~~H~~~N~-g~ 142 (198)
.+++..+...||...++|-|.. ..+++|++|+++..+.. .+|+. ...++++|++++++. |.+|.+.|. ++
T Consensus 78 ~~~v~~l~w~PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~N~~~~ 156 (208)
T 2gm6_A 78 RFSIVSFVWGPGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSGRPVLHGEPTRLEPGHVEAVSPTVGDIHRVHNAYDD 156 (208)
T ss_dssp SCEEEEEEECTTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEeCCCcccCcccCCc-ceEEEEecccEEEEEeecCCCCccccccceEEeCCCCEEEECCCCCCeEEeccCCCC
Confidence 5788889999999999999975 99999999999887643 33322 147899999999999 999999999 78
Q ss_pred CcEEEEEEEeC
Q 038563 143 TWATILGSFDS 153 (198)
Q Consensus 143 ~~~~~~~~~~s 153 (198)
++++.|-++..
T Consensus 157 ~~avsLHvY~~ 167 (208)
T 2gm6_A 157 RVSISIHVYGA 167 (208)
T ss_dssp SCEEEEEEESS
T ss_pred CcEEEEEEEcC
Confidence 89999988865
No 114
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=98.49 E-value=2.8e-07 Score=70.03 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=53.1
Q ss_pred CCcEecceeCCCCCEEEEEEecEEEEEEEeCC-C--eEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 82 VGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ-N--RIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 82 pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~-~--~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
++++..+|.|++..|+++|++|++++.+.+.. + +.....|++|++++||+|..|...... .+.++.+=+
T Consensus 38 ~~~i~~~h~H~~tDE~Fivl~G~l~i~~rd~~~~~~~d~~V~l~~Ge~yvVPkGveH~p~a~~--e~~vLLiEp 109 (140)
T 3d0j_A 38 IEGIAHLEIHHSTDEQFILSAGKAILITAEKENDKFNIELTLMEKGKVYNVPAECWFYSITQK--DTKMMYVQD 109 (140)
T ss_dssp TTTCCEEEEESSCCEEEEEEESCEEEEEEEEETTEEEEEEEECCTTCCEEECTTCEEEEEECT--TCEEEEEEE
T ss_pred cccCHhhccCCCCCeEEEEEecEEEEEEecCcCCCCccceEEecCCCEEEeCCCccCcccCCC--ceEEEEEEe
Confidence 34677899999999999999999999987421 1 123578999999999999999988743 444444433
No 115
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=98.40 E-value=1.7e-06 Score=65.44 Aligned_cols=60 Identities=17% Similarity=0.187 Sum_probs=48.7
Q ss_pred ecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCC-CcEEEEEEE
Q 038563 86 NVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGD-TWATILGSF 151 (198)
Q Consensus 86 ~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~-~~~~~~~~~ 151 (198)
..||.| +.-|++||++|++++.+ +++ .+.+++||++++|+|.+|...+.++ ++...+++.
T Consensus 31 ~~p~~h-~~~~i~~v~~G~~~~~i---~~~--~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~~~~i~ 91 (164)
T 2arc_A 31 DRPLGM-KGYILNLTIRGQGVVKN---QGR--EFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVY 91 (164)
T ss_dssp EETTCC-SSEEEEEEEEECEEEEE---TTE--EEEECTTCEEEECTTCCEEEEECTTSSEEEEEEEE
T ss_pred ccccCC-CceEEEEEEEeEEEEEE---CCE--EEEecCCeEEEEcCCCCEEEEeCCCCCcEEEEEEE
Confidence 358999 57999999999999887 366 5799999999999999999988763 555555443
No 116
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=98.39 E-value=2.3e-06 Score=69.97 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=65.3
Q ss_pred CCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCC
Q 038563 53 TGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRG 132 (198)
Q Consensus 53 ~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G 132 (198)
.|.+.+.+... +. ..+..+.+++++||+..++|+|+ ..|.+|||+|++. +. + ..+.+||.+..|+|
T Consensus 27 ~Gv~~~~L~~~--~~--e~g~~~~lvr~~pG~~~p~H~H~-g~Ee~~VL~G~f~----d~-~----~~~~~Gd~~~~P~g 92 (223)
T 3o14_A 27 KGVERRMLDRI--GG--EVARATSIVRYAPGSRFSAHTHD-GGEEFIVLDGVFQ----DE-H----GDYPAGTYVRNPPT 92 (223)
T ss_dssp TTEEEEEEEEE--SS--SSCEEEEEEEECTTEECCCEECT-TCEEEEEEEEEEE----ET-T----EEEETTEEEEECTT
T ss_pred CCEEEEEeecC--CC--ccccEEEEEEECCCCCcccccCC-CCEEEEEEEeEEE----EC-C----eEECCCeEEEeCCC
Confidence 46666666422 11 12456778999999999999996 7899999999975 33 2 37899999999999
Q ss_pred CeeEEEecCCCcEEEEEEEeC
Q 038563 133 LVHFQMNVGDTWATILGSFDS 153 (198)
Q Consensus 133 ~~H~~~N~g~~~~~~~~~~~s 153 (198)
..|.... ++.+.+++.+..
T Consensus 93 ~~H~p~a--~~gc~~~vk~~~ 111 (223)
T 3o14_A 93 TSHVPGS--AEGCTIFVKLWQ 111 (223)
T ss_dssp CEECCEE--SSCEEEEEEESC
T ss_pred CccccEe--CCCCEEEEEecC
Confidence 9999886 677888888754
No 117
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=98.36 E-value=3.2e-06 Score=66.39 Aligned_cols=60 Identities=15% Similarity=0.204 Sum_probs=49.9
Q ss_pred EEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC----eEEEEEEeCCcEEEECCCCeeEEEec
Q 038563 79 DFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN----RIFAKVIEKGEVMVFPRGLVHFQMNV 140 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~----~~~~~~l~~Gd~~~iP~G~~H~~~N~ 140 (198)
.-.|+...-.|.| ..+|++|+++|++.+.+.|. | +.....|++||++++|+|..|+-...
T Consensus 40 vgGPn~r~D~H~~-~~eE~Fy~lkG~m~l~v~d~-g~~~~~~~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 40 VGGPNERTDYHIN-PTPEWFYQKKGSMLLKVVDE-TDAEPKFIDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp ECSSBCCSCEEEC-SSCEEEEEEESCEEEEEEEC-SSSSCEEEEEEECTTEEEEECTTCCEEEEEC
T ss_pred EcCCCcCCcCcCC-CCceEEEEEeCEEEEEEEcC-CCcccceeeEEECCCCEEEcCCCCCcCCccc
Confidence 3445566888955 58999999999999999874 4 44568999999999999999998764
No 118
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.35 E-value=1.2e-05 Score=64.71 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=71.3
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeC--CC-----eEEEEEEeCCcEEEE-CCCCeeEEEecC-C
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDT--QN-----RIFAKVIEKGEVMVF-PRGLVHFQMNVG-D 142 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~--~~-----~~~~~~l~~Gd~~~i-P~G~~H~~~N~g-~ 142 (198)
..++..+...||...++|-|..+..+++|++|+++..+.+- ++ ..-..++++||+.++ |++.+|.+.|.+ +
T Consensus 69 ~~~l~ll~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~~~l~~G~v~~~~~~~giH~V~N~s~~ 148 (200)
T 3eln_A 69 KFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHT 148 (200)
T ss_dssp TCEEEEEEECTTCBCCEECCTTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEEEEECTTCEEEECTTTCEEEEECCCSS
T ss_pred ceEEEEEEECCCCcCCCccCCCceEEEEEEeeeEEEEEeecCCCCcccccccceEEeCCCCEEEecCCCcEEEEECCCCC
Confidence 47888899999999999999878999999999999886542 11 122578999999999 888899999999 7
Q ss_pred CcEEEEEEEeCCCCc
Q 038563 143 TWATILGSFDSQNPG 157 (198)
Q Consensus 143 ~~~~~~~~~~s~~pg 157 (198)
++++-|=++.....+
T Consensus 149 ~~avSlHvY~pp~~~ 163 (200)
T 3eln_A 149 EPAVSLHLYSPPFDT 163 (200)
T ss_dssp CCEEEEEEEESCCSE
T ss_pred CCEEEEEeCCCCccc
Confidence 899888888865543
No 119
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=98.24 E-value=6.3e-06 Score=69.23 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=54.0
Q ss_pred eCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 81 DVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 81 ~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
.|+.-.-.| |...+|++|+++|...+.+.|. |+.....|++||++++|+|+.|.-.... .++.+++=.
T Consensus 39 GpN~R~d~H-~~~~dE~FyqlkG~m~l~~~d~-g~~~~V~i~eGemfllP~gv~HsP~r~~--et~gLviE~ 106 (286)
T 2qnk_A 39 GPNTRKDYH-IEEGEEVFYQLEGDMVLRVLEQ-GKHRDVVIRQGEIFLLPARVPHSPQRFA--NTVGLVVER 106 (286)
T ss_dssp SCBCCCCEE-ECSSCEEEEEEESCEEEEEEET-TEEEEEEECTTEEEEECTTCCEEEEECT--TCEEEEEEE
T ss_pred CCCcCccCc-CCCCCeEEEEEeCeEEEEEEeC-CceeeEEECCCeEEEeCCCCCcCCcccC--CeEEEEEee
Confidence 344447789 8899999999999999999974 6555789999999999999999998743 444444433
No 120
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=98.14 E-value=8.8e-05 Score=58.16 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=90.7
Q ss_pred CCCeEEEEEcccCCC-CccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecE-EEEEEEeCCCeEEEEE----EeCCc
Q 038563 52 ETGLASIPVNVNVFP-GLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGK-IYSGFVDTQNRIFAKV----IEKGE 125 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P-~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~----l~~Gd 125 (198)
|.||..+......-+ .-.....+....-|.+|....+|.. ++.|+.+...|. +++.+++++|+....+ +.+|+
T Consensus 27 PEGG~yret~rs~~~~~~~R~~~T~IYfLL~~g~~S~~HRv-~sdEiW~~~~G~pL~l~l~~~dg~~~~~~LG~dv~~Ge 105 (170)
T 1yud_A 27 VEGGFYRSSYRSETAFDPSRQLWSSIYFLLRTGEVSHFHRL-TADEMWYFHAGQSLTIYMISPEGELTTAQLGLDLAAGE 105 (170)
T ss_dssp TTSSEEEEEEECSSBSSSSSBSCEEEEEEEETTCCEEEEEC-SSCEEEEEEEESCEEEEEECTTSCEEEEEESSCTTTTE
T ss_pred CCCceEEEeecCCCCCCCCCccceEEEEEECCCCCCeeEEc-CCCEEEEEEcCCCEEEEEEcCCCCEEEEEeCCCcccCc
Confidence 788988877754311 1111246777778999998888887 699999999998 5888888888754444 56799
Q ss_pred E--EEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeechhhhccCCCHHHHHHHhCCCHHHHHHHh
Q 038563 126 V--MVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFGLTPKEIAKLR 190 (198)
Q Consensus 126 ~--~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~~~~f~~~~p~~vla~af~v~~~~v~~l~ 190 (198)
. ++||+|..+...+.+.+.+.+-++. .||+..-. |. -.+.+-|.+.|---.+.|++|.
T Consensus 106 ~pQ~vVP~G~wqaa~~~~g~~~LV~C~V---aPGF~f~d---fe-l~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 106 RPQFLVPKGCIFGSAMNQDGFSLVGCMV---SPGFTFDD---FE-LFSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp ESCEEECTTCEEEEEESSSSEEEEEEEE---SSCCCGGG---CC-BCBHHHHHHSCCTTHHHHTTSC
T ss_pred eeEEEECCCCEEEEEECCCCcEEEEEEE---CCCccCCc---eE-EcCHHHHHhHCchhHHHHHHhh
Confidence 8 9999999999998822555555554 37764422 22 2356666666766666666653
No 121
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=98.14 E-value=5.4e-05 Score=57.66 Aligned_cols=97 Identities=11% Similarity=0.044 Sum_probs=67.4
Q ss_pred CCCeEEEEEcc-cCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCc-EEEE
Q 038563 52 ETGLASIPVNV-NVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGE-VMVF 129 (198)
Q Consensus 52 ~~g~~v~~~~~-~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd-~~~i 129 (198)
..+|.++.+.. ..+|- .-.++-. ....+||....+|.|....|++++++|++.+.+.|. ....+..|.+.. .+.|
T Consensus 15 D~RG~L~~~e~~~~ipf-~ikRvy~-~~~~~~g~~RG~H~Hk~~~q~li~l~Gs~~v~ldDg-~~~~~~~L~~~~~gL~I 91 (141)
T 2pa7_A 15 DSRGSLVAIEENKNIPF-SIKRVYY-IFDTKGEEPRGFHAHKKLEQVLVCLNGSCRVILDDG-NIIQEITLDSPAVGLYV 91 (141)
T ss_dssp ETTEEEEEEETTTTSSS-CCCEEEE-EESCCSSCCEEEEEESSCCEEEEEEESCEEEEEECS-SCEEEEEECCTTEEEEE
T ss_pred cCCCcEEEEeccCCCCC-CccEEEE-EEecCCCCEECcCcCCCceEEEEEEccEEEEEEECC-cEEEEEEECCCCcEEEe
Confidence 34677777765 33443 2112222 224568889999999999999999999999988432 223356676655 5999
Q ss_pred CCCCeeEEEecCCCcEEEEEEEe
Q 038563 130 PRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 130 P~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
|+|+.|.+.+.+.+ ++++.+-+
T Consensus 92 ppgvWh~~~~~s~~-avllvlas 113 (141)
T 2pa7_A 92 GPAVWHEMHDFSSD-CVMMVLAS 113 (141)
T ss_dssp CTTCEEEEECCCTT-CEEEEEES
T ss_pred CCCEEEEEEEcCCC-eEEEEECC
Confidence 99999999999886 66655443
No 122
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=98.10 E-value=5.3e-05 Score=62.49 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=59.8
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
++++..+.+ .|..... .+| ..|++||++|++++.. +|+ ..++++||+++||+|..|.+...+.- ..+++++
T Consensus 46 ~~~~G~~~~-~g~~~v~-~~p-~dE~~~VleG~~~lt~---~g~--~~~~~~Gd~~~ip~G~~~~w~~~~~~-~~~y~~~ 116 (238)
T 3myx_A 46 GIAAGIVEF-GTALSVE-AYP-YTEMLVMHRGSVTLTS---GTD--SVTLSTGESAVIGRGTQVRIDAQPES-LWAFCAS 116 (238)
T ss_dssp SEEEEEEEE-CSEEEES-SCS-SEEEEEEEESEEEEEE---TTE--EEEEETTCEEEECTTCCEEEEECTTE-EEEEEEE
T ss_pred CeEEEEEEe-ccccccc-cCC-CcEEEEEEEeEEEEEC---CCe--EEEEcCCCEEEECCCCEEEEEecCCe-EEEEEec
Confidence 688888888 5554332 232 4899999999999875 366 56899999999999999999986554 5566777
Q ss_pred e-CCC---Cceeee
Q 038563 152 D-SQN---PGLQKI 161 (198)
Q Consensus 152 ~-s~~---pg~~~~ 161 (198)
. ... +|...+
T Consensus 117 ~~~~~p~~~~~~~i 130 (238)
T 3myx_A 117 TQASGPDKSGITAL 130 (238)
T ss_dssp CSCCSCCCCSEEEE
T ss_pred cCCCCCCCCccEEe
Confidence 7 233 455444
No 123
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=98.06 E-value=9.2e-05 Score=58.29 Aligned_cols=74 Identities=19% Similarity=0.100 Sum_probs=61.3
Q ss_pred EEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC------CeEEEEEEe---CCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 79 DFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ------NRIFAKVIE---KGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~------~~~~~~~l~---~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
...+|.+...|+|..-.++++|++|++..-++|-- |+.....|. ....++||+|..|.+.+.++++++++.
T Consensus 59 ~s~~GvlRG~H~h~~q~klv~~v~G~v~dv~vD~R~~SpTfg~~~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly 138 (174)
T 3ejk_A 59 EVLPRRVKAWKRHSLMTQLFAVPVGCIHVVLYDGREKSPTSGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVAN 138 (174)
T ss_dssp EECBTCEEEEEEESSCCEEEEEEESEEEEEEECCCTTCTTTTCEEEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEE
T ss_pred ECCCCCEECcEecCCCceEEEEEeeEEEEEEEeCCCCCCCCCeEEEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEE
Confidence 35789999999998889999999999999988632 456778888 567999999999999999987776665
Q ss_pred EEe
Q 038563 150 SFD 152 (198)
Q Consensus 150 ~~~ 152 (198)
.-+
T Consensus 139 ~~s 141 (174)
T 3ejk_A 139 CTD 141 (174)
T ss_dssp EES
T ss_pred ECC
Confidence 444
No 124
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.97 E-value=0.00013 Score=59.13 Aligned_cols=83 Identities=22% Similarity=0.214 Sum_probs=68.2
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe--CCCeEE----EEEEeCCcEEEECCC--CeeEEEec-CC
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD--TQNRIF----AKVIEKGEVMVFPRG--LVHFQMNV-GD 142 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~--~~~~~~----~~~l~~Gd~~~iP~G--~~H~~~N~-g~ 142 (198)
.+++..+...||...++|=|. +.-++.|++|+++..+.. .+|+.. ...+.+||+.+|.++ .+|.+.|. ++
T Consensus 72 ~f~v~~l~W~PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~N~~~d 150 (211)
T 3uss_A 72 RFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSD 150 (211)
T ss_dssp SCEEEEEEECTTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSCEEECSCCEEECTTCEEEEBTTTBCCEEEEESCSS
T ss_pred CEEEEEEEECCCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCCcccccceEEecCCCEEEECCCCCCEEEEccCCCC
Confidence 478888999999999999997 899999999999877643 334321 368999999999987 89999998 47
Q ss_pred CcEEEEEEEeCCC
Q 038563 143 TWATILGSFDSQN 155 (198)
Q Consensus 143 ~~~~~~~~~~s~~ 155 (198)
++++-|=++....
T Consensus 151 ~~avSLHvYg~pl 163 (211)
T 3uss_A 151 RTSISIHVYGANI 163 (211)
T ss_dssp SCEEEEEEESSCG
T ss_pred CCEEEEEEcCCCC
Confidence 8888888887543
No 125
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=97.90 E-value=9.9e-05 Score=54.41 Aligned_cols=62 Identities=16% Similarity=0.085 Sum_probs=47.0
Q ss_pred eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEec
Q 038563 73 MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNV 140 (198)
Q Consensus 73 ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~ 140 (198)
..+......||...- +.+ ...|++|||+|++++.. .+|+ ..++++||+++||+|..-.+.-.
T Consensus 42 ~~~GvWe~tPG~~~~-~~~-~~~E~~~iLeG~~~lt~--ddG~--~~~l~aGD~~~~P~G~~gtWev~ 103 (116)
T 3es4_A 42 TIVAVWMAEPGIYNY-AGR-DLEETFVVVEGEALYSQ--ADAD--PVKIGPGSIVSIAKGVPSRLEIL 103 (116)
T ss_dssp CEEEEEEECSEEEEE-CCC-SEEEEEEEEECCEEEEE--TTCC--CEEECTTEEEEECTTCCEEEEEC
T ss_pred EEEEEEecCCceeEC-eeC-CCcEEEEEEEeEEEEEe--CCCe--EEEECCCCEEEECCCCeEEEEEe
Confidence 555667889987652 223 23499999999999864 3466 46999999999999998887653
No 126
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=97.71 E-value=0.00023 Score=58.64 Aligned_cols=63 Identities=10% Similarity=0.081 Sum_probs=49.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEec
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNV 140 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~ 140 (198)
.++.......||.....++ ...|++|||+|++++. +++|+ ..++++||+++||+|..-.+.-.
T Consensus 166 ~~~~GiW~~tpG~~~~~~~--~~~E~~~ILeG~v~lt--~~~G~--~~~~~aGD~~~~P~G~~~tWev~ 228 (238)
T 3myx_A 166 TLRIGVWDSTPYERISRPH--KIHELMNLIEGRVVLS--LENGS--SLTVNTGDTVFVAQGAPCKWTST 228 (238)
T ss_dssp SCEEEEEEECCEEBCCEEC--SSCEEEEEEECCEEEE--ETTSC--EEEECTTCEEEECTTCEEEEEES
T ss_pred CEEEeEEEeCCCEEECCcC--CCCEEEEEEEeEEEEE--eCCCC--EEEECCCCEEEECCCCEEEEEEC
Confidence 4788888888887544332 4689999999999876 44677 56899999999999998777654
No 127
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=97.58 E-value=0.00064 Score=55.76 Aligned_cols=72 Identities=4% Similarity=-0.033 Sum_probs=52.2
Q ss_pred ceEEEEEEEeCCc--EecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEECCCCeeEEEec--CCCcEE
Q 038563 72 GMSMVRADFDVGG--VNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFPRGLVHFQMNV--GDTWAT 146 (198)
Q Consensus 72 gls~~~~~l~pg~--~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP~G~~H~~~N~--g~~~~~ 146 (198)
+.-+....+.... ..++||| +.-|++||++|++. .+. ++ .....+++||++++|+|.+|.+... ++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~G~~~-~i~---~~~~~~~~l~~g~l~~i~p~~~h~~~~~~~~~~~~~ 80 (276)
T 3gbg_A 6 SFQTNVYRMSKFDTYIFNNLYI-NDYKMFWIDSGIAK-LID---KNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENIN 80 (276)
T ss_dssp TEEEEEEEECTTCEEEEEEEEC-SSCEEEEESSSCEE-EEE---TTTTEEEEECTTEEEEECTTCEEEEEEEECCSSCEE
T ss_pred hhhhhhhhhhcccchhccHhhh-cceEEEEEecCceE-EEC---CccceeEEEcCCCEEEEcCCCceeeccccCCCcceE
Confidence 3445555666655 4688999 67999999999999 653 22 0136899999999999999998765 334444
Q ss_pred EE
Q 038563 147 IL 148 (198)
Q Consensus 147 ~~ 148 (198)
.+
T Consensus 81 ~~ 82 (276)
T 3gbg_A 81 VS 82 (276)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 128
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=97.53 E-value=0.0005 Score=56.04 Aligned_cols=79 Identities=15% Similarity=0.245 Sum_probs=59.9
Q ss_pred CCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCC
Q 038563 53 TGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRG 132 (198)
Q Consensus 53 ~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G 132 (198)
.|..+..+.... +-.+..++++||...++|.| ...|+ +||+|++. +. +. .+.+|+.+-.|.|
T Consensus 133 ~Gv~~~~L~~~~-------~E~v~l~r~~~G~~~~~~~h-gG~Ei-lVL~G~~~----d~-~~----~~~~GsWlR~P~g 194 (223)
T 3o14_A 133 EGISTSLLHEDE-------RETVTHRKLEPGANLTSEAA-GGIEV-LVLDGDVT----VN-DE----VLGRNAWLRLPEG 194 (223)
T ss_dssp TTEEEEEEEECS-------SCEEEEEEECTTCEEEECCS-SCEEE-EEEEEEEE----ET-TE----EECTTEEEEECTT
T ss_pred CCeEEEEEecCC-------CcEEEEEEECCCCccCCCCC-CcEEE-EEEEeEEE----EC-Cc----eECCCeEEEeCCC
Confidence 355555555332 23556678999999999999 88886 99999975 22 33 6799999999999
Q ss_pred CeeEEEecCCCcEEEEEE
Q 038563 133 LVHFQMNVGDTWATILGS 150 (198)
Q Consensus 133 ~~H~~~N~g~~~~~~~~~ 150 (198)
..|.... |++.+.+++-
T Consensus 195 s~h~~~a-g~~g~~i~~k 211 (223)
T 3o14_A 195 EALSATA-GARGAKIWMK 211 (223)
T ss_dssp CCEEEEE-EEEEEEEEEE
T ss_pred CccCcEE-CCCCeEEEEE
Confidence 9999887 6677776643
No 129
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=97.37 E-value=0.0015 Score=54.38 Aligned_cols=71 Identities=17% Similarity=0.261 Sum_probs=54.4
Q ss_pred EEEEEEeCCcEecceeCCCCCE-EEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECC--CCeeEEEecCC-CcEEEEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATE-IAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPR--GLVHFQMNVGD-TWATILGS 150 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~E-i~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~--G~~H~~~N~g~-~~~~~~~~ 150 (198)
+....+.||.-.++|-|. ..| +-||++|+++. .|+.|. ..++++||+-.+.+ |+.|...|..+ +++.++-+
T Consensus 66 ln~~~~~pg~gf~~HPHr-g~EtvTyvl~G~~~H--~DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQl 140 (256)
T 2vec_A 66 LNQEVLAPGAAFQPRTYP-KVDILNVILDGEAEY--RDSEGN--HVQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQL 140 (256)
T ss_dssp EEEEEECTTCEEEEECCS-SEEEEEEEEESEEEE--EETTSC--EEEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEE
T ss_pred ccccccCCCCccCCcCCC-CcEEEEEEEeeEEEE--EeCCCC--EEEECCCeEEEEECCCCeEEEEEECCCCceEEEEEE
Confidence 455678999989999995 566 56999999875 466665 46899999999955 58999999754 56554433
No 130
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=97.34 E-value=0.0044 Score=49.03 Aligned_cols=68 Identities=18% Similarity=0.260 Sum_probs=54.8
Q ss_pred eCCcEecceeC--CCCCEEEEEEecEEEEEEEeCC------CeEEEEEEeC--CcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 81 DVGGVNVPHFH--PRATEIAVVLEGKIYSGFVDTQ------NRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 81 ~pg~~~~pH~H--p~a~Ei~yVl~G~~~~~~~~~~------~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
.+|.+...|+| ..-.++++|++|++..-++|-- |+.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 56 ~~GvlRGlH~q~p~~q~klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 133 (185)
T 1ep0_A 56 VRGVLRGLHFQREKPQGKLVRVIRGEIFDVAVDLRKNSDTYGEWTGVRLSDENRREFFIPEGFAHGFLALSDE-CIVNY 133 (185)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred cCCeEecceecCCccccEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEEE
Confidence 47889999999 7789999999999865555532 4667788876 57999999999999999887 54443
No 131
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=97.31 E-value=0.0011 Score=54.32 Aligned_cols=79 Identities=18% Similarity=0.061 Sum_probs=58.4
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEec---EEEEEEEeCC-------------CeEE------EEEEeCCcEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEG---KIYSGFVDTQ-------------NRIF------AKVIEKGEVMVF 129 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G---~~~~~~~~~~-------------~~~~------~~~l~~Gd~~~i 129 (198)
...--.+.+.+|...|.|.|+.-.|-+++--| .+++...+++ |+.. ..+|+||+.+-+
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiTl 184 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESICL 184 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEEE
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEec
Confidence 45666678999999999999999999999998 4444443322 2211 358999999999
Q ss_pred CCCCeeEEEecCCC-cEEEEEE
Q 038563 130 PRGLVHFQMNVGDT-WATILGS 150 (198)
Q Consensus 130 P~G~~H~~~N~g~~-~~~~~~~ 150 (198)
++|+.|+++..+.. ++.+-.+
T Consensus 185 ~Pg~~H~F~ae~g~G~vligEV 206 (246)
T 3kmh_A 185 PPGLYHSFWAEAGFGDVLVGEV 206 (246)
T ss_dssp CTTEEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEEEecCCCccEEEEEc
Confidence 99999999986652 4544444
No 132
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=97.23 E-value=0.0035 Score=50.43 Aligned_cols=68 Identities=19% Similarity=0.332 Sum_probs=54.4
Q ss_pred eCCcEecceeCC---CCCEEEEEEecEEEEEEEeC------CCeEEEEEEeC--CcEEEECCCCeeEEEecCCCcEEEE
Q 038563 81 DVGGVNVPHFHP---RATEIAVVLEGKIYSGFVDT------QNRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 81 ~pg~~~~pH~Hp---~a~Ei~yVl~G~~~~~~~~~------~~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
.+|.++.+|+|. .-.++++|++|++..-++|- .|+.....|.+ +..++||+|..|.+.+.+++...++
T Consensus 78 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~DV~VDlR~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y 156 (205)
T 3ryk_A 78 EAGTIRGLHFQKNPKAQTKLIQVMQGAIYDVIVDLRKDSPTFKQWRGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMY 156 (205)
T ss_dssp STTBEEEEEEECTTSCCCEEEEEEESEEEEEEEECCTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSSEEEEE
T ss_pred CCCcEeEeEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEE
Confidence 688899999994 36899999999976666652 26777888886 6899999999999999987633333
No 133
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=97.22 E-value=0.0066 Score=48.00 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=54.4
Q ss_pred eCCcEecceeC--CCCCEEEEEEecEEEEEEEeCC------CeEEEEEEeC--CcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 81 DVGGVNVPHFH--PRATEIAVVLEGKIYSGFVDTQ------NRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 81 ~pg~~~~pH~H--p~a~Ei~yVl~G~~~~~~~~~~------~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
.+|.++..|+| ..-..+++|++|++..-++|-- |+.....|.+ +..++||+|..|.+.+.+++ ++++.
T Consensus 57 ~~GvlRG~H~q~p~~q~Klv~vv~G~v~dV~vD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~y 134 (184)
T 2ixk_A 57 ARGVLRGLHYQIRQAQGKLVRATLGEVFDVAVDLRRGSPTFGQWVGERLSAENKRQMWIPAGFAHGFVVLSEY-AEFLY 134 (184)
T ss_dssp ETTBEEEEEEESSSCCCEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEEE
T ss_pred CCCceeeEEeCCCCCcCEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEeCCCcCCEEEeCCCeEEEEEEcCCC-EEEEE
Confidence 47889999999 6678999999999865555521 5667788887 47999999999999999887 54443
No 134
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=97.20 E-value=0.0058 Score=48.85 Aligned_cols=64 Identities=20% Similarity=0.267 Sum_probs=51.8
Q ss_pred eCCcEecceeCCC---CCEEEEEEecEEEEEEEeC------CCeEEEEEEeC--CcEEEECCCCeeEEEecCCCc
Q 038563 81 DVGGVNVPHFHPR---ATEIAVVLEGKIYSGFVDT------QNRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTW 144 (198)
Q Consensus 81 ~pg~~~~pH~Hp~---a~Ei~yVl~G~~~~~~~~~------~~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~ 144 (198)
.+|.+...|+|.. -..+++|++|++..-++|- .|+.....|.+ +..++||+|+.|.+.+.+++.
T Consensus 73 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~en~~~L~IP~G~aHgf~~lsd~a 147 (196)
T 1wlt_A 73 RKGVVRGLHYQRTPKEQGKIIFVPKGRILDVAVDVRKSSPTFGKYVKAELNEENHYMLWIPPGFAHGFQALEDSI 147 (196)
T ss_dssp CTTBEEEEEEECTTSCCEEEEEEEESEEEEEEEECBTTSTTTTCEEEEEEETTTCCEEEECTTEEEEEEESSSEE
T ss_pred CCCcceeEEccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCCe
Confidence 5788999999953 5799999999996655652 15667788886 689999999999999998753
No 135
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=97.17 E-value=0.0034 Score=50.25 Aligned_cols=71 Identities=17% Similarity=0.208 Sum_probs=57.4
Q ss_pred EeCCcEecceeCCCCCEEEEEEe-cEEEEEEEeCC-----CeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEe
Q 038563 80 FDVGGVNVPHFHPRATEIAVVLE-GKIYSGFVDTQ-----NRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFD 152 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~Ei~yVl~-G~~~~~~~~~~-----~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~ 152 (198)
-.+|.+..+|.| .-..+++|++ |++..-++|-- |+.....|..+..++||+|..|.+.+.+++ ++++...+
T Consensus 67 s~~GvlRGlH~h-~q~Klv~~~~~G~v~dV~VDlR~SpTfg~~~~v~Ls~~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 143 (197)
T 1nxm_A 67 SRKNVLRGLHAE-PWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRGVANGFQVLSDF-VAYSYLVN 143 (197)
T ss_dssp EETTBEEEEEEC-SSCEEEEECSSCCEEEEEEECBSSTTTTCEEEEEECTTEEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCCCCcceeeec-ccceEEEEcCCCEEEEEEEECCCCCCCCeEEEEEeCCCcEEEeCCCeEEEEEeccCC-eEEEEECC
Confidence 367889999999 5789999999 99766666654 677788999999999999999999999876 44443333
No 136
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=97.11 E-value=0.0026 Score=47.40 Aligned_cols=65 Identities=20% Similarity=0.148 Sum_probs=52.5
Q ss_pred CCcEecce----eCCCCCEEEEEEecEEEEEEEeCCCe---EEEEEEeCCcEEEECCCCeeEEEecCCCcEEE
Q 038563 82 VGGVNVPH----FHPRATEIAVVLEGKIYSGFVDTQNR---IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATI 147 (198)
Q Consensus 82 pg~~~~pH----~Hp~a~Ei~yVl~G~~~~~~~~~~~~---~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~ 147 (198)
|.+..+.| +|+.--+.+.|++|++++.+.+++|. .....+.+|+..+||++..|.+.-..+ ++.+
T Consensus 23 P~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsd-d~~f 94 (127)
T 3bb6_A 23 PAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTD-DTYF 94 (127)
T ss_dssp CGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESST-TCEE
T ss_pred hHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCC-CEEE
Confidence 56678889 58877899999999999987766554 245678999999999999999998666 4444
No 137
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=97.10 E-value=0.0054 Score=50.46 Aligned_cols=70 Identities=20% Similarity=0.282 Sum_probs=53.3
Q ss_pred EEEEEEEeCCcEecceeCCCCCE-EEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEE--CCCCeeEEEecCC-CcEEEE
Q 038563 74 SMVRADFDVGGVNVPHFHPRATE-IAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVF--PRGLVHFQMNVGD-TWATIL 148 (198)
Q Consensus 74 s~~~~~l~pg~~~~pH~Hp~a~E-i~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~i--P~G~~H~~~N~g~-~~~~~~ 148 (198)
.+..-.+.||.-.++|-|. ..| +-||++|+++. .|+.|. ..++++||+-.+ -+|+.|...|..+ +++.++
T Consensus 42 v~n~d~i~pg~gf~~HPHr-g~EtvTyvl~G~~~H--~DS~Gn--~~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~l 115 (242)
T 1tq5_A 42 VINDDVIEAGQGFGTHPHK-DMEILTYVLEGTVEH--QDSMGN--KEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLY 115 (242)
T ss_dssp EEEEEEECTTCEEEEEEEC-SCEEEEEEEESEEEE--EESSSC--EEEEETTCEEEEECTTCEEEEEECCCSSCCEEEE
T ss_pred eeccceeCCCCcCCCcCCC-CcEEEEEEEEeEEEE--EeCCCC--cEEECCCcEEEEECCCCcEEEEEcCCCCCeEEEE
Confidence 3445678899889999995 566 66999999875 466665 468999999999 5558999999754 555444
No 138
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=97.09 E-value=0.01 Score=46.81 Aligned_cols=67 Identities=15% Similarity=0.243 Sum_probs=53.3
Q ss_pred eCCcEecceeCC---CCCEEEEEEecEEEEEEEeCC------CeEEEEEEeC--CcEEEECCCCeeEEEecCCCcEEEE
Q 038563 81 DVGGVNVPHFHP---RATEIAVVLEGKIYSGFVDTQ------NRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 81 ~pg~~~~pH~Hp---~a~Ei~yVl~G~~~~~~~~~~------~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
.+|.+...|+|. .-..+++|++|++..-++|-- |+.....|.+ +..++||+|..|.+.+.+++ ++++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VD~R~~SpTfg~~~~~~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (183)
T 1dzr_A 55 KKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEY-AEFL 132 (183)
T ss_dssp ETTBEEEEEEECGGGCCCEEEEEEESEEEEEEEECCTTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCCeeeeeEccCCCCCCcEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 378899999995 568999999999865555531 5667788887 47999999999999999887 4443
No 139
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=97.04 E-value=0.0044 Score=53.36 Aligned_cols=71 Identities=20% Similarity=0.221 Sum_probs=53.2
Q ss_pred EEEeC-CcEecceeCCCCCEEEEEEecEEEEEEE-eCC---------------------------------CeEEEEEEe
Q 038563 78 ADFDV-GGVNVPHFHPRATEIAVVLEGKIYSGFV-DTQ---------------------------------NRIFAKVIE 122 (198)
Q Consensus 78 ~~l~p-g~~~~pH~Hp~a~Ei~yVl~G~~~~~~~-~~~---------------------------------~~~~~~~l~ 122 (198)
+-+.| |+..++|+.+ ..-++..+.|+=++.+. .++ ......+|+
T Consensus 145 ~~~gp~g~~~~~H~D~-~dnfl~Qv~G~Krw~L~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~L~ 223 (342)
T 1vrb_A 145 VYAAKNGGGFKAHFDA-YTNLIFQIQGEKTWKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDAEIVNLT 223 (342)
T ss_dssp EEEECSSCCCCSEECS-SEEEEEEEESCEEEEEECCSSCSSCSSCEECC----CCHHHHHHCCSCCCCTTCCSSEEEEEC
T ss_pred EEEeCCCCCCCCeECC-hhcEEEEEEEEEEEEEecCCccccccCcccccccccccccccccchhhccccccCCceEEEEC
Confidence 45666 7789999985 46777788999888877 322 012467999
Q ss_pred CCcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 123 KGEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 123 ~Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
+||+++||+|..|+..+.++++..-+.
T Consensus 224 pGD~LyiP~gwwH~v~s~~~~~slsvs 250 (342)
T 1vrb_A 224 PGTMLYLPRGLWHSTKSDQATLALNIT 250 (342)
T ss_dssp TTCEEEECTTCEEEEECSSCEEEEEEE
T ss_pred CCcEEEeCCCccEEEEECCCCceEEEE
Confidence 999999999999999998655544443
No 140
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=97.03 E-value=0.011 Score=47.80 Aligned_cols=64 Identities=16% Similarity=0.157 Sum_probs=51.9
Q ss_pred eCCcEecceeCCC---CCEEEEEEecEEEEEEEeC------CCeEEEEEEeCC--cEEEECCCCeeEEEecCCCc
Q 038563 81 DVGGVNVPHFHPR---ATEIAVVLEGKIYSGFVDT------QNRIFAKVIEKG--EVMVFPRGLVHFQMNVGDTW 144 (198)
Q Consensus 81 ~pg~~~~pH~Hp~---a~Ei~yVl~G~~~~~~~~~------~~~~~~~~l~~G--d~~~iP~G~~H~~~N~g~~~ 144 (198)
.+|.+...|+|.. -..+++|++|++..-++|- .|+.....|.+- ..++||+|+.|.+.+.+++.
T Consensus 63 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 137 (216)
T 2c0z_A 63 VRGVVRGIHFVDVPPGQAKYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAVYLSEGIGHGFCAISDEA 137 (216)
T ss_dssp ETTBEEEEEEECTTTCCCEEEEEEESEEEEEEEECCBTCTTTTCEEEEEEETTTCCEEEECTTEEEEEEECSSEE
T ss_pred CCCcEEcCEecCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEcCCCe
Confidence 4788999999954 5899999999986555552 256677888875 69999999999999998873
No 141
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=97.02 E-value=0.011 Score=47.40 Aligned_cols=67 Identities=15% Similarity=0.234 Sum_probs=53.1
Q ss_pred eCCcEecceeCCC---CCEEEEEEecEEEEEEEeCC------CeEEEEEEeC--CcEEEECCCCeeEEEecCCCcEEEE
Q 038563 81 DVGGVNVPHFHPR---ATEIAVVLEGKIYSGFVDTQ------NRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 81 ~pg~~~~pH~Hp~---a~Ei~yVl~G~~~~~~~~~~------~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
.+|.+...|+|.. -..+++|++|++..-++|-- |+.....|.+ +..++||+|+.|.+.+.+++ ++++
T Consensus 55 ~~GvlRGlH~q~~p~~q~Klv~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (205)
T 1oi6_A 55 KRGVVRGIHYTVTPPGTAKYVYCARGKAMDIVIDIRVGSPTFGQWDSVLMDQQDPRAVYLPVGVGHAFVALEDD-TVMS 132 (205)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESCEEEEEECCCBTCTTTTCEEEEEECSSSCCEEEECTTCEEEEEECSTT-EEEE
T ss_pred CCCeEeeeeccCCCCCCceEEEEeCCEEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCCeeEEEEEccCC-eEEE
Confidence 5788999999953 58999999999865556531 4567788887 47999999999999999887 4443
No 142
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=96.96 E-value=0.0028 Score=50.38 Aligned_cols=64 Identities=20% Similarity=0.362 Sum_probs=48.2
Q ss_pred EEEeC-CcEecceeCCCCCEEEEEEecEEEEEEEeCCC----------------------------------eEEEEEEe
Q 038563 78 ADFDV-GGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN----------------------------------RIFAKVIE 122 (198)
Q Consensus 78 ~~l~p-g~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~----------------------------------~~~~~~l~ 122 (198)
+-+.+ |...++|+.+ ..-++.+++|+=++.+..+.. +.+..+|+
T Consensus 128 ~wiG~~gs~t~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l~ 206 (235)
T 4gjz_A 128 AWFGPQGTISPLHQDP-QQNFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILS 206 (235)
T ss_dssp EEEECTTCEEEEECCS-SEEEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGCCCEEEEEC
T ss_pred EEEeCCCCCceeeecc-ccceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCCCcEEEEEC
Confidence 34555 4567778775 466788899999988865420 22467899
Q ss_pred CCcEEEECCCCeeEEEecCC
Q 038563 123 KGEVMVFPRGLVHFQMNVGD 142 (198)
Q Consensus 123 ~Gd~~~iP~G~~H~~~N~g~ 142 (198)
+||+++||+|..|++.|.+.
T Consensus 207 pGD~LyiP~gW~H~V~~l~~ 226 (235)
T 4gjz_A 207 PGEILFIPVKYWHYVRALDL 226 (235)
T ss_dssp TTCEEEECTTCEEEEEESSS
T ss_pred CCCEEEeCCCCcEEEEECCC
Confidence 99999999999999999854
No 143
>4hn1_A Putative 3-epimerase in D-allose pathway; 3'-monoepimerase, natural product, deoxysugar, chalcomycin, mycinose, cupin fold; HET: TYD THM; 1.60A {Streptomyces bikiniensis} PDB: 4hmz_A* 4hn0_A
Probab=96.96 E-value=0.011 Score=47.45 Aligned_cols=69 Identities=13% Similarity=0.143 Sum_probs=55.7
Q ss_pred eCCcEecceeCC---CCCEEEEEEecEEEEEEEeC------CCeEEEEEEeC--CcEEEECCCCeeEEEecCCCcEEEEE
Q 038563 81 DVGGVNVPHFHP---RATEIAVVLEGKIYSGFVDT------QNRIFAKVIEK--GEVMVFPRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 81 ~pg~~~~pH~Hp---~a~Ei~yVl~G~~~~~~~~~------~~~~~~~~l~~--Gd~~~iP~G~~H~~~N~g~~~~~~~~ 149 (198)
.+|.+..+|.|. .-..+++|++|++.--++|- .|+.....|.+ +..++||+|..|.+.+.+++...++-
T Consensus 52 ~~GvlRGlH~q~~p~~q~KlV~~~~G~v~DV~VDlR~~SpTfG~w~~v~Ls~en~~~l~IP~GfaHGF~~Lsd~a~~~Y~ 131 (201)
T 4hn1_A 52 HRGALRGINYTEIPPGQAKYSVCVRGAGLDVVVDVRIGSPTFGRWEIVPMDAERNTAVYLTAGLGRAFLSLTDDATLVFL 131 (201)
T ss_dssp CTTBEEEEEEECSSSCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSTTEEEEEE
T ss_pred CCCceEEEEecCCCCCceEEEEEeCCeEEEEEEECCCCCCCCCeEEEEEecCCCCCEEEeCCcceEEEeecCCCeEEEEe
Confidence 578899999994 56899999999987777762 26777788887 67999999999999999876444443
No 144
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=96.96 E-value=0.017 Score=47.05 Aligned_cols=64 Identities=17% Similarity=0.273 Sum_probs=51.9
Q ss_pred eCCcEecceeCCC---CCEEEEEEecEEEEEEEeC------CCeEEEEEEeCC--cEEEECCCCeeEEEecCCCc
Q 038563 81 DVGGVNVPHFHPR---ATEIAVVLEGKIYSGFVDT------QNRIFAKVIEKG--EVMVFPRGLVHFQMNVGDTW 144 (198)
Q Consensus 81 ~pg~~~~pH~Hp~---a~Ei~yVl~G~~~~~~~~~------~~~~~~~~l~~G--d~~~iP~G~~H~~~N~g~~~ 144 (198)
.+|.+...|+|.. -..+++|++|++..-++|- .|+.....|.+- ..++||+|+.|.+.+.+++.
T Consensus 74 ~~GvlRGlH~q~~p~~q~KlV~vv~G~v~dV~VDlR~~SpTfG~~~~v~Ls~~n~~~L~IP~G~aHgF~~Lsd~a 148 (225)
T 1upi_A 74 SAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNS 148 (225)
T ss_dssp CTTBEEEEEEECTTTCCCEEEEEEESEEEEEEECCCBTCTTTTCEEEEEEETTTCCEEEECTTCEEEEEECSSSE
T ss_pred CCCeEeeeeccCCCCCcceEEEEeCCeEEEEEEECCCCCCCCCcEEEEEecCCCCcEEEeCCCeeEEEEEcCCCE
Confidence 5788999999953 5899999999986555652 256677888874 79999999999999998874
No 145
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.68 E-value=0.011 Score=51.05 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=53.6
Q ss_pred EEEe-CCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-----------------------------------eEEEEEE
Q 038563 78 ADFD-VGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-----------------------------------RIFAKVI 121 (198)
Q Consensus 78 ~~l~-pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-----------------------------------~~~~~~l 121 (198)
+-+. +|...++|+.+. .-+..+++|+=++.+..+.. +.+..+|
T Consensus 187 l~iG~~gs~t~~H~D~~-~n~~~qv~G~K~~~L~pP~~~~~ly~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~~~~~~~l 265 (349)
T 3d8c_A 187 LLIGMEGNVTPAHYGEQ-QNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVV 265 (349)
T ss_dssp EEEECTTCEEEEECCSE-EEEEEEEESCEEEEEECGGGHHHHCBBCTTSTTBTBBCSCTTSCCTTTCGGGGGCCEEEEEE
T ss_pred EEEECCCCCccceECCh-hcEEEEEeceEEEEEeCcchhhhhccccccCCCCCcccccCCCcchhhCcccccCCcEEEEE
Confidence 4455 456789999864 67888899998887764320 3467899
Q ss_pred eCCcEEEECCCCeeEEEecCC-CcEEEEEE
Q 038563 122 EKGEVMVFPRGLVHFQMNVGD-TWATILGS 150 (198)
Q Consensus 122 ~~Gd~~~iP~G~~H~~~N~g~-~~~~~~~~ 150 (198)
++||+++||+|..|+..|.++ .....+-.
T Consensus 266 ~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 266 GPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp CTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred CCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 999999999999999999873 34444443
No 146
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=96.60 E-value=0.015 Score=48.35 Aligned_cols=70 Identities=21% Similarity=0.139 Sum_probs=58.8
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCe-eEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLV-HFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~-H~~~N~g~~~~~~~~~ 150 (198)
|-|-.++.++|+...|+-.|....| +||++|++.++ ++ .|.+|...++|+|+. -.++-.|.+++.++..
T Consensus 90 GaSTl~V~fpp~~~~P~Gi~~ad~E-~fVL~G~i~~G-----~~----~l~~h~Y~f~PaGV~~~~~kv~~~~g~~iL~f 159 (303)
T 2qdr_A 90 GASTSRVVLPPKFEAPSGIFTADLE-IFVIKGAIQLG-----EW----QLNKHSYSFIPAGVRIGSWKVLGGEEAEILWM 159 (303)
T ss_dssp SCEEEEEEECTTCEECCBEESSCEE-EEEEESEEEET-----TE----EECTTEEEEECTTCCBCCEEEETTSCEEEEEE
T ss_pred CcceEEEEecCCCCCCCcccccceE-EEEEEeEEEeC-----CE----EecCCceEEecCCCccCceeecCCCCcEEEEE
Confidence 7888999999999999999976677 99999999864 44 789999999999984 3556678888888877
Q ss_pred E
Q 038563 151 F 151 (198)
Q Consensus 151 ~ 151 (198)
-
T Consensus 160 e 160 (303)
T 2qdr_A 160 E 160 (303)
T ss_dssp E
T ss_pred e
Confidence 3
No 147
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=96.46 E-value=0.0051 Score=52.00 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=48.9
Q ss_pred eEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeC---------CCeEEEEEEeCCcEEEECCCCeeEEEecCCC
Q 038563 73 MSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDT---------QNRIFAKVIEKGEVMVFPRGLVHFQMNVGDT 143 (198)
Q Consensus 73 ls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~---------~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~ 143 (198)
+.+.|+.+.||+.+.||.=+ .|+.....|..++.+.-. +|+ ...+++|+++++....+|+..|.|+.
T Consensus 91 l~~vRlrL~PG~~I~~HrD~--~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~--~~~m~~GE~w~~d~~~~H~v~N~g~~ 166 (290)
T 1e5r_A 91 LQMARSRNLKNAIVIPHRDF--VELDREVDRYFRTFMVLEDSPLAFHSNEDT--VIHMRPGEIWFLDAATVHSAVNFSEI 166 (290)
T ss_dssp EEEEEEEEEESEEEEEECCC----------CBCCEEEECSCCTTEEEEETTE--EECCCTTEEEECCTTSCEEEEESSSS
T ss_pred hheEEEEeCCCCEeeCccCc--cccccccCCceEEEeeEecCCCcEEEECCE--EEecCCCCEEEEcCCCeeEEEcCCCC
Confidence 47788899999999999443 355544566666554311 244 56899999999999999999999987
Q ss_pred cEEEE
Q 038563 144 WATIL 148 (198)
Q Consensus 144 ~~~~~ 148 (198)
+-+-+
T Consensus 167 ~RIhL 171 (290)
T 1e5r_A 167 SRQSL 171 (290)
T ss_dssp CCCEE
T ss_pred CeEEE
Confidence 64433
No 148
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=96.33 E-value=0.063 Score=47.94 Aligned_cols=104 Identities=11% Similarity=0.053 Sum_probs=65.4
Q ss_pred cCceEEeccccCC----CcC-CCCeEEEEEcccCCCCccccceEEEEEEEeCCcE-ecceeCCCCCEEEEEEecEEEEEE
Q 038563 36 VEDFVFSGIKFRG----KFS-ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGV-NVPHFHPRATEIAVVLEGKIYSGF 109 (198)
Q Consensus 36 ~~df~~~~~~~~~----~~~-~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~-~~pH~Hp~a~Ei~yVl~G~~~~~~ 109 (198)
++.+.|+.+.-+. .+. ..| ..+.+.. ..+..+. |+.+...... ..| ...-..-+++|++++.+|++++.
T Consensus 118 p~qLrw~p~~ip~~~~~~~Dfv~G-l~tl~gn-gD~~~~~-G~aI~~y~~n-~sM~~~~f~NaDGD~Livpq~G~l~i~- 192 (471)
T 1eyb_A 118 PNQLRWKPFEIPKASQKKVDFVSG-LHTLCGA-GDIKSNN-GLAIHIFLCN-TSMENRCFYNSDGDFLIVPQKGNLLIY- 192 (471)
T ss_dssp CSCEEECSCCCCCTTTCCCCTTTT-EEEEEEE-SCGGGTC-CEEEEEEEEC-SCCCSEEEEESSEEEEEEEEESCEEEE-
T ss_pred ccccccCCCCCCccccCCCCcccc-hhheecc-CCccccc-ceEEEEEeCC-CCcccceeecCCCCEEEEEEeCCEEEE-
Confidence 5567788765433 233 444 3444432 3333321 4444322222 234 44556678999999999999864
Q ss_pred EeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 110 VDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 110 ~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
++-|+ ..+++||++|||+|+.+.+.=.+ ++..+++
T Consensus 193 -TEfG~---L~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 193 -TEFGK---MLVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp -ETTEE---EEECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred -Eeccc---EEeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 56677 57899999999999999987665 6655544
No 149
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=96.26 E-value=0.029 Score=46.93 Aligned_cols=103 Identities=19% Similarity=0.192 Sum_probs=67.6
Q ss_pred CCCeEEEEEcccCCCCccccc--eEEEEEEEeCCcEecceeCCCCCEE-EEEEecEEEEEEEeCCCeEEEEEEeCCcEEE
Q 038563 52 ETGLASIPVNVNVFPGLNTLG--MSMVRADFDVGGVNVPHFHPRATEI-AVVLEGKIYSGFVDTQNRIFAKVIEKGEVMV 128 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~g--ls~~~~~l~pg~~~~pH~Hp~a~Ei-~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~ 128 (198)
..|..++.+. ....+...| +-+.. ...++.-.++|-| +..|+ -||++|+++. .|+.|. ..+|++||+=.
T Consensus 19 G~g~~v~R~~--~~~~~~~~gpf~~ld~-~~~~~~gf~~HPH-rg~EtVTyvl~G~~~H--~DS~Gn--~~~i~~GdvQw 90 (277)
T 2p17_A 19 SPIHRSGSVL--EPGNWQEYDPFLLLME-DIFERGTFDVHPH-RGIETVTYVISGELEH--FDSKAG--HSTLGPGDVQW 90 (277)
T ss_dssp ETTEEEEEEE--CSSCHHHHTTEEEEEE-EEECTTCCCCEEE-CSEEEEEEEEESCEEE--EETTTE--EEEECTTCEEE
T ss_pred CCCeEEeecC--CcccccccCCEEEEec-CCCCCCCCCCCCC-CCcEEEEEEEEeEEEE--eeCCCC--ceEECCCeEEE
Confidence 4566665554 223333333 23344 6677888999999 57885 5999999875 477676 57899999887
Q ss_pred ECCC--CeeEEEecCCCcEEEE--EE-EeC----CCCceeeec
Q 038563 129 FPRG--LVHFQMNVGDTWATIL--GS-FDS----QNPGLQKIP 162 (198)
Q Consensus 129 iP~G--~~H~~~N~g~~~~~~~--~~-~~s----~~pg~~~~~ 162 (198)
+-+| +.|.-.|..++++.++ ++ +.. ..|.++.+.
T Consensus 91 MtAG~GI~HsE~~~~~~~~~~lQlWvnLP~~~k~~~P~y~~~~ 133 (277)
T 2p17_A 91 MTAGRGVVHKEDPASGSTVHSLQLWVNLPSAYKMTEPRYQNLR 133 (277)
T ss_dssp EECTTCEEEEEEECTTCCEEEEEEEEECCGGGTTCCCEEEEEC
T ss_pred EeCCCCEEEEeecCCCCCEEEEEEEeeCChhhcCCCCcceeec
Confidence 7765 7999999876665443 22 332 226666654
No 150
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=96.21 E-value=0.043 Score=46.25 Aligned_cols=104 Identities=20% Similarity=0.193 Sum_probs=69.1
Q ss_pred CCCeEEEEEcccCCCCccccc--eEEEEEEEeCCcEecceeCCCCCEEE-EEE-ecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 52 ETGLASIPVNVNVFPGLNTLG--MSMVRADFDVGGVNVPHFHPRATEIA-VVL-EGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~g--ls~~~~~l~pg~~~~pH~Hp~a~Ei~-yVl-~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
..|..++.+. ..|.+...| +-+....+.|+.-.++|-| +..|++ ||+ +|+++.. |+.|. ..+|++||+=
T Consensus 19 G~G~~v~R~~--~~~~~~~~gpf~~ld~~~~~~~~Gf~~HPH-rg~EtVTyvl~~G~~~H~--DS~Gn--~~~i~~GdvQ 91 (290)
T 1j1l_A 19 GVGARVRRSI--GRPELKNLDPFLLFDEFKGGRPGGFPDHPH-RGFETVSYLLEGGSMAHE--DFCGH--TGKMNPGDLQ 91 (290)
T ss_dssp TBTEEEEECT--TSTTCCCCTTEEEEEEEEECTTCBEEEEEE-BSEEEEEEECSSSCEEEE--ETTSC--EEEECTTCEE
T ss_pred CCCeEEEEeC--CCccccccCcEEEEEccccCCCCCCCCCCC-CCeEEEEEECcceEEEEe--eCCCC--ceEECCCcEE
Confidence 3455666554 445555444 3444556778877899999 678854 899 9998854 66666 4689999987
Q ss_pred EECCC--CeeEEEecCCCcEEEEEE---EeC----CCCceeeec
Q 038563 128 VFPRG--LVHFQMNVGDTWATILGS---FDS----QNPGLQKIP 162 (198)
Q Consensus 128 ~iP~G--~~H~~~N~g~~~~~~~~~---~~s----~~pg~~~~~ 162 (198)
.+-+| +.|.-.|...+++.++=+ +.. ..|.++.+.
T Consensus 92 wMtAG~GI~HsE~~~~~~~~~~lQlWvnLP~~~k~~~P~y~~~~ 135 (290)
T 1j1l_A 92 WMTAGRGILHAEMPCSEEPAHGLQLWVNLRSSEKMVEPQYQELK 135 (290)
T ss_dssp EEECTTCEEEEEEECSSSCEEEEEEEEECCGGGTTSCCEEEEEC
T ss_pred EEeCCCCEEEEeEcCCCCCEEEEEEEecCChhhcCCCCcceecc
Confidence 77755 789999986666544322 332 236666654
No 151
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=96.14 E-value=0.091 Score=43.84 Aligned_cols=80 Identities=15% Similarity=0.165 Sum_probs=53.9
Q ss_pred ceEEEEEEEeCCcE---ecceeCCCC--C------EEEEE-Ee---cEEEEEEEeCCCe-EEEEEEeCCcEEEECCCCee
Q 038563 72 GMSMVRADFDVGGV---NVPHFHPRA--T------EIAVV-LE---GKIYSGFVDTQNR-IFAKVIEKGEVMVFPRGLVH 135 (198)
Q Consensus 72 gls~~~~~l~pg~~---~~pH~Hp~a--~------Ei~yV-l~---G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP~G~~H 135 (198)
.|-+..+ +.|||. -|||.|.+. . |+.|- +. |-+...+-+++++ -....++-||++++|+|. |
T Consensus 152 ~LlvgEv-~tpgG~WSSyPpHkHd~~~~~~e~~lEE~YYf~~~~~~gf~~q~vyt~d~~~de~~~V~~~d~VlvP~Gy-H 229 (270)
T 2qjv_A 152 SLLVVEV-YTNAGATSSWPAHXHDTAVEGQETYLEETYYHRFNPPQGFCLQRVYTDDRSLDECMAVYNRDVVXVPXGY-H 229 (270)
T ss_dssp SCEEEEE-EECTTCEESCSCEECEEEETTTEEECEEEEEEEEESTTCEEEEEEECTTSSSEEEEEEETTCEEEESSSB-C
T ss_pred eEEEEEE-EcCCCccccCCCcccccccCcccccceeEEEEECCCCCCEEEEEEeCCCCCCceEEEEECCCEEecCCCc-C
Confidence 5777776 778774 399999754 4 88864 33 4444444333331 235899999999999999 9
Q ss_pred EEEecCCCcEEEEEEEeC
Q 038563 136 FQMNVGDTWATILGSFDS 153 (198)
Q Consensus 136 ~~~N~g~~~~~~~~~~~s 153 (198)
-.....-....+|.++-.
T Consensus 230 p~~a~pGy~~YylwvMaG 247 (270)
T 2qjv_A 230 PVATIAGYDNYYLNVMAG 247 (270)
T ss_dssp CEEECTTCEEEEEEEEEC
T ss_pred CCcCCCCcccEEEEEEEC
Confidence 866553445567766654
No 152
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=96.05 E-value=0.027 Score=50.15 Aligned_cols=63 Identities=19% Similarity=0.363 Sum_probs=47.6
Q ss_pred EEEeCCcE-e-cceeCCCCCEEEEEEecEEEEEEEeCCC----------------eEEEEEEeCCcEEEECCCCeeEEEe
Q 038563 78 ADFDVGGV-N-VPHFHPRATEIAVVLEGKIYSGFVDTQN----------------RIFAKVIEKGEVMVFPRGLVHFQMN 139 (198)
Q Consensus 78 ~~l~pg~~-~-~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~----------------~~~~~~l~~Gd~~~iP~G~~H~~~N 139 (198)
+.+.|++. . ++|+- ...-++..+.|+=+..+..+.. .....+|++||++++|+|..|+..+
T Consensus 143 ~y~~~~g~~g~~~H~D-~~dvf~~Qv~G~Krw~l~~p~~pl~~~~s~d~~~~~~~~~~~~~L~pGD~LYiP~g~~H~~~s 221 (442)
T 2xdv_A 143 VYITPAGSQGLPPHYD-DVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFMLKPGDLLYFPRGTIHQADT 221 (442)
T ss_dssp EEEECTTCBCSCSEEC-SSEEEEEEEESCEEEEEECCSSTTCSSCEECCTTTSCSCSEEEEECTTCEEEECTTCEEEEEC
T ss_pred eEECCCCCCCccceEC-CcceEEEEEEeEEEEEEccCCCCccccCCCCchhhcCCcceEEEECCCcEEEECCCceEEEEe
Confidence 35556554 3 69997 4566777888998888765531 1246799999999999999999998
Q ss_pred cC
Q 038563 140 VG 141 (198)
Q Consensus 140 ~g 141 (198)
.+
T Consensus 222 ~~ 223 (442)
T 2xdv_A 222 PA 223 (442)
T ss_dssp CS
T ss_pred cC
Confidence 75
No 153
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=96.04 E-value=0.027 Score=48.18 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=49.5
Q ss_pred eCCcEecceeCCCCCEEEEEEecEEEEEEEeCC------------------------------CeEEEEEEeCCcEEEEC
Q 038563 81 DVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ------------------------------NRIFAKVIEKGEVMVFP 130 (198)
Q Consensus 81 ~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~------------------------------~~~~~~~l~~Gd~~~iP 130 (198)
.+|+..++|+.+ ..-++..++|+=++.+..+. -+.+..+|++||+++||
T Consensus 175 ~~g~~~~~H~D~-~~n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~LyiP 253 (338)
T 3al5_A 175 SPGLQLWTHYDV-MDNLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVLFIP 253 (338)
T ss_dssp CTTCEEEEECCS-SEEEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEEEEC
T ss_pred CCCCCccceECC-cccEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEEEEC
Confidence 345578889886 35677789999888776431 02467899999999999
Q ss_pred CCCeeEEEecCCCcEEEEE
Q 038563 131 RGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 131 ~G~~H~~~N~g~~~~~~~~ 149 (198)
+|..|+..|.+ ....+.
T Consensus 254 ~gWwH~v~~l~--~sisvn 270 (338)
T 3al5_A 254 ALWFHNVISEE--FGVGVN 270 (338)
T ss_dssp TTCEEEEEESS--CEEEEE
T ss_pred CCCeEEEeeCC--CEEEEE
Confidence 99999999985 344444
No 154
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=95.73 E-value=0.12 Score=41.11 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=52.9
Q ss_pred EEEEEEEeCCcEecceeCCCCCEEEE----EEec-EEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 74 SMVRADFDVGGVNVPHFHPRATEIAV----VLEG-KIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 74 s~~~~~l~pg~~~~pH~Hp~a~Ei~y----Vl~G-~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
++....|.||+.+.||..+....+-+ ++-. .+.+.+ +|+ ....++|++++|--...|...|.++++-+++
T Consensus 103 ~a~fs~L~pG~~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V---~~~--~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL 177 (197)
T 3rcq_A 103 QIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRC---ANE--TKTWEEGKVLIFDDSFEHEVWQDASSFRLIF 177 (197)
T ss_dssp EEEEEEECTTEEEEEECCSCTTEEEEEEEEECCSSSEEEEE---TTE--EECCCBTCEEEECTTSCEEEEECSSSCEEEE
T ss_pred eEEEEEeCCCCCcCCeeCCCCCeEEEEEEEEeCCCCcEEEE---CCE--EEEeeCCcEEEEcCCeEEEEEECCCCCEEEE
Confidence 56667899999999999975444322 1111 222222 244 5688999999999999999999998875554
Q ss_pred EEEeCCCCc
Q 038563 149 GSFDSQNPG 157 (198)
Q Consensus 149 ~~~~s~~pg 157 (198)
. ++-..|.
T Consensus 178 ~-~D~~rPd 185 (197)
T 3rcq_A 178 I-VDVWHPE 185 (197)
T ss_dssp E-EEEECTT
T ss_pred E-EeeeCCC
Confidence 3 3433443
No 155
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.56 E-value=0.068 Score=45.90 Aligned_cols=64 Identities=17% Similarity=0.217 Sum_probs=48.9
Q ss_pred EEeC-CcEecceeCCCCC-EEEEEEecEEEEEEEeCC---------------------------------------CeEE
Q 038563 79 DFDV-GGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQ---------------------------------------NRIF 117 (198)
Q Consensus 79 ~l~p-g~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~---------------------------------------~~~~ 117 (198)
-+.+ |...++|+++... -+..++.|+=++.+..++ .+.+
T Consensus 177 ~~G~~gs~t~~H~D~~~~~~~~~~v~G~K~~~L~pP~~~~~ly~~~~~~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~ 256 (336)
T 3k2o_A 177 VMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTSTPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPL 256 (336)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEESCEEEEEECTTSCHHHHCCCHHHHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCE
T ss_pred EECCCCccCCcccCCCccceeeEEEeeeEEEEEeCCCcchhcccCcccccCCCccchhhhhhhhCcchhhhcccccCceE
Confidence 3444 5578899997543 588899998887776432 0124
Q ss_pred EEEEeCCcEEEECCCCeeEEEecCC
Q 038563 118 AKVIEKGEVMVFPRGLVHFQMNVGD 142 (198)
Q Consensus 118 ~~~l~~Gd~~~iP~G~~H~~~N~g~ 142 (198)
..+|++||+++||+|..|+..|.++
T Consensus 257 ~~~l~pGd~l~iP~gw~H~v~~~~~ 281 (336)
T 3k2o_A 257 EILQKPGETVFVPGGWWHVVLNLDT 281 (336)
T ss_dssp EEEECTTCEEEECTTCEEEEEESSC
T ss_pred EEEECCCCEEEeCCCCcEEEecCCC
Confidence 6789999999999999999999865
No 156
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=95.48 E-value=0.059 Score=48.60 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=49.5
Q ss_pred eCCcEecceeCCCCC-EEEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCCe
Q 038563 81 DVGGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGLV 134 (198)
Q Consensus 81 ~pg~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~~ 134 (198)
.+|...+.|..+..+ -+..+++|+=++.+..+. .+.+..++++||+++||.|..
T Consensus 274 ~~gS~T~~H~D~~~t~~w~~vv~G~K~w~L~PPt~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~pGe~lfIPsGWw 353 (488)
T 3kv5_D 274 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 353 (488)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGSSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCeEECCCCCceeeeccCeeEEEEEeCCcccccccccccccCCccchhhhcccccceEEEeeCCCCEEEeCCCce
Confidence 456689999997655 366899999998887652 133568999999999999999
Q ss_pred eEEEecCC
Q 038563 135 HFQMNVGD 142 (198)
Q Consensus 135 H~~~N~g~ 142 (198)
|++.|..+
T Consensus 354 H~V~nled 361 (488)
T 3kv5_D 354 HAVLTSQD 361 (488)
T ss_dssp EEEEEEEE
T ss_pred EEeeCCCC
Confidence 99999743
No 157
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=95.30 E-value=0.13 Score=46.39 Aligned_cols=68 Identities=19% Similarity=0.381 Sum_probs=48.8
Q ss_pred EEEEeCCcE--ecceeCCCCCEEEEEEecEEEEEEEeCCC--------------------eEEEEEEeCCcEEEECCCCe
Q 038563 77 RADFDVGGV--NVPHFHPRATEIAVVLEGKIYSGFVDTQN--------------------RIFAKVIEKGEVMVFPRGLV 134 (198)
Q Consensus 77 ~~~l~pg~~--~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~--------------------~~~~~~l~~Gd~~~iP~G~~ 134 (198)
.+.+.|++. .++|+-+ ..-++.-+.|+=+..+..+.. .....+|++||+++||+|.+
T Consensus 167 N~Y~tp~Gs~g~~pH~D~-~DvFllQv~G~KrWrL~~P~~~~~~lp~~~~~~~~~~~~~~p~~e~~L~pGDvLYiP~g~~ 245 (489)
T 4diq_A 167 NVYLTPPNSQGFAPHYDD-IEAFVLQLEGRKLWRVYRPRAPTEELALTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFI 245 (489)
T ss_dssp EEEEECSSBCCSCCBCCS-SEEEEEEEEECEEEEEECCSSGGGTTCSSCCCCCCGGGCCCCSEEEEECTTCEEEECTTCE
T ss_pred eEEecCCCcccccCccCC-cceEEEEEeeEEEEEEeCCCCccccCCCcccccCCcccccCcceEEEECCCCEEEECCCCc
Confidence 345666664 4799874 455666677887777765321 12468999999999999999
Q ss_pred eEEEecCCCcE
Q 038563 135 HFQMNVGDTWA 145 (198)
Q Consensus 135 H~~~N~g~~~~ 145 (198)
|+..+.+++..
T Consensus 246 H~~~s~~~~~S 256 (489)
T 4diq_A 246 HQAECQDGVHS 256 (489)
T ss_dssp EEEEBCSSCCE
T ss_pred eEEEecCCCce
Confidence 99999865544
No 158
>3loi_A Putative uncharacterized protein; beta barrel, unknown function; 2.10A {Branchiostoma belcheri tsingtauense} SCOP: b.82.1.0 PDB: 3lzz_A*
Probab=95.28 E-value=0.77 Score=35.69 Aligned_cols=128 Identities=17% Similarity=0.123 Sum_probs=82.7
Q ss_pred CC-CeEEEEEcccC-------CCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecE-EEEEEEeCCCeEEEEEEe
Q 038563 52 ET-GLASIPVNVNV-------FPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGK-IYSGFVDTQNRIFAKVIE 122 (198)
Q Consensus 52 ~~-g~~v~~~~~~~-------~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~l~ 122 (198)
|. ||..+...... ..+-.. ..+....-|.+|....+|.- ++.|+.+-..|. +++.+++++|+....+|.
T Consensus 25 PEEGG~yrEt~rs~~~v~~~~~~~~R~-~~TaIYfLL~~~~~S~~HRv-~sdEiW~~~~G~pL~l~~~~~dG~~~~~~LG 102 (172)
T 3loi_A 25 PASGGWFRETYRSDVQVEAEGFDGKRS-VLTMIYYLMQAGQPDPFHRV-KSDETFVHNLGGSMKIHMIHPDGSYSCSILG 102 (172)
T ss_dssp TTSSSEEEEEEECSCEECCTTSSSCEE-SCEEEEEEEETTCCEEEEEC-SSEEEEEEEEESCEEEEEECTTSCEEEEEES
T ss_pred CcCCCeEEEEEECcCcccCCCCCCCcc-cceEEEEEEcCCCCccCEEe-cCCEEEEEEcCCCEEEEEEcCCCceEEEEeC
Confidence 66 88887776442 112221 34566667888885544444 789999999996 688899998876666664
Q ss_pred ----CCc---EEEECCCCeeEEEecCCCcEEEEEEEeCCCCceeeechhhhccCCCHHHHHHHhCCCHHHHHHHh
Q 038563 123 ----KGE---VMVFPRGLVHFQMNVGDTWATILGSFDSQNPGLQKIPSAVFGSNIKEELLEKAFGLTPKEIAKLR 190 (198)
Q Consensus 123 ----~Gd---~~~iP~G~~H~~~N~g~~~~~~~~~~~s~~pg~~~~~~~~f~~~~p~~vla~af~v~~~~v~~l~ 190 (198)
+|+ -++||+|....... | .-.++... -.||+..-. |. ..+.+-|.+.|---.+.|++|-
T Consensus 103 ~d~~~Ge~~pQ~vVP~G~WqaA~~-~--~~~LVsct--VaPGF~f~d---fe-l~~~~~L~~~~P~~~~~I~~lt 168 (172)
T 3loi_A 103 NPLEHPEARHQVVVPRRVWFAQEV-D--GYCLASVL--VAPGFDFKD---FS-LGKREELIKEYPQHRDVIMRCT 168 (172)
T ss_dssp CTTTSTTCBSEEEECTTCEEEEEE-S--SEEEEEEE--EESCCCGGG---CE-ECCHHHHHHHCGGGHHHHHHTS
T ss_pred CCcccCCcceEEEECCCEEEEEEe-C--CcEEEEEE--EcCCccchh---cE-EcCHHHHHHHCchHHHHHHHhc
Confidence 577 78999999877766 2 22232221 237765522 22 3466666667776667777764
No 159
>3m3i_A Putative uncharacterized protein; PFAM:PF06172, structural genomics, structural genomics of pathogenic protozoa consortium, SGPP; 2.35A {Leishmania major}
Probab=95.25 E-value=0.96 Score=36.59 Aligned_cols=131 Identities=13% Similarity=0.110 Sum_probs=83.6
Q ss_pred CCCeEEEEEcccCC------CCccccceEEEEEEEeCCcEecceeC-CCCCEEEEEEecE-EEEEEEeCCC---------
Q 038563 52 ETGLASIPVNVNVF------PGLNTLGMSMVRADFDVGGVNVPHFH-PRATEIAVVLEGK-IYSGFVDTQN--------- 114 (198)
Q Consensus 52 ~~g~~v~~~~~~~~------P~l~~~gls~~~~~l~pg~~~~pH~H-p~a~Ei~yVl~G~-~~~~~~~~~~--------- 114 (198)
+.||..+....... .+-.. ..+....-|.+|... ||| -++.|+.+-..|. +++.+++++|
T Consensus 34 PEGG~yrEt~Rs~~~v~~~~~~~R~-~~TaIYfLL~~g~~S--~~HRv~sdEiW~~h~G~pL~l~li~~dG~~~~~~~~~ 110 (225)
T 3m3i_A 34 PEGGYYSEVVRSAHKVDNEEGNRRH-AYTTIYFLCTPESPS--HLHRLCSDETWMYHAGDPLQLHVILKDPQDEDRIAAQ 110 (225)
T ss_dssp TTSSEEEEEEECSSEEECTTSCEEE-SCEEEEEEECSSSCE--EEEECSSEEEEEEEEESCEEEEEEESSSTTTTC----
T ss_pred CCCceEEEEEECCCcccCCCCCCcc-cceeEEEEecCCCCc--ccEEecCCEEEEEECCCCEEEEEEcCCCccccccccc
Confidence 78888887765432 11111 245555678888854 555 4799999999998 6788888777
Q ss_pred -------------------eEEEEEE----eCCc--EEEECCCCeeEEEecCCC-----cEEEEEEEeCCCCceeeechh
Q 038563 115 -------------------RIFAKVI----EKGE--VMVFPRGLVHFQMNVGDT-----WATILGSFDSQNPGLQKIPSA 164 (198)
Q Consensus 115 -------------------~~~~~~l----~~Gd--~~~iP~G~~H~~~N~g~~-----~~~~~~~~~s~~pg~~~~~~~ 164 (198)
+....+| .+|+ -++||+|......-.+++ .-.++... -.||+..-.
T Consensus 111 ~~~~P~~~~~~~~~~~~~~~~~~~~LG~d~~~Ge~pQ~vVP~G~WqaA~~~~~~~~~~~~~sLVsCt--VaPGFdF~D-- 186 (225)
T 3m3i_A 111 PPAAPQAETDTADARPKYQVYRRVLVGARVERGELLQYTVPGGAIFGSSVAADGADGQAGYSLVSCI--VSPGFDYRD-- 186 (225)
T ss_dssp --------------CCSSCEEEEEEESSCGGGTCBSEEEECTTCEEEEECCSSSTTCSSSCEEEEEE--EESCCCGGG--
T ss_pred ccccccccccccccccccCceEEEEeCCCccCCceeEEEeCCCEEEEEEECCCCcCcCCCeEEEEEE--EcCCccchh--
Confidence 4445556 4466 679999998887766543 22333222 237765532
Q ss_pred hhccCCCHHHHHHHhCCCHHHHHHHhh
Q 038563 165 VFGSNIKEELLEKAFGLTPKEIAKLRK 191 (198)
Q Consensus 165 ~f~~~~p~~vla~af~v~~~~v~~l~~ 191 (198)
|. .++.+-|.+.|.--++.|++|-.
T Consensus 187 -Fe-l~~~~~L~~~~P~~~~~I~~lt~ 211 (225)
T 3m3i_A 187 -FE-IFTQAQLMELYPQHEAVIKQMAY 211 (225)
T ss_dssp -CE-ECBHHHHHHHCGGGHHHHHHHSB
T ss_pred -cE-ecCHHHHHHHCchHHHHHHHhch
Confidence 22 34666666677777778888754
No 160
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.10 E-value=0.13 Score=45.83 Aligned_cols=64 Identities=16% Similarity=0.203 Sum_probs=49.7
Q ss_pred EeCCcEecceeCCCCC-EEEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCC
Q 038563 80 FDVGGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGL 133 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~ 133 (198)
-++|+....|..+.++ -+..+++|+=+..+..+. .+.+..++++||+++||.|.
T Consensus 238 G~~gS~T~~HiD~~~ts~w~~vi~GrK~w~L~PPt~~nl~~~~~~~~s~~~~~~~~~~~~~~~~~v~l~pGetlfIPsGW 317 (447)
T 3kv4_A 238 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 317 (447)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEESEEEEEEECCCHHHHHHHHHHHTCSSGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEeeeEEEEEEeCCCcccccchhhcccCcchhhhhccccccceEEEEECCCcEEecCCCC
Confidence 3456678999987655 366899999888887543 12356799999999999999
Q ss_pred eeEEEecCCC
Q 038563 134 VHFQMNVGDT 143 (198)
Q Consensus 134 ~H~~~N~g~~ 143 (198)
.|++.|..+.
T Consensus 318 wH~V~nleds 327 (447)
T 3kv4_A 318 IHAVLTPVDC 327 (447)
T ss_dssp EEEEEESSCE
T ss_pred eEEEecCCCE
Confidence 9999998543
No 161
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=95.07 E-value=0.092 Score=46.89 Aligned_cols=64 Identities=17% Similarity=0.107 Sum_probs=50.1
Q ss_pred EeCCcEecceeCCCCC-EEEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCC
Q 038563 80 FDVGGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGL 133 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~ 133 (198)
=++|...+.|+.+.++ -+..+++|+=+..+..+. .+.+..++++||+++||.|.
T Consensus 203 Gp~gS~T~~H~D~~~ts~w~avi~GrK~w~L~PP~~~~~~~y~~~~~s~~q~~~~~p~~~~~~~~v~l~pGE~LfIPsGW 282 (451)
T 2yu1_A 203 SVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENWLLSGSQGDIFLGDRVSDCQRIELKQGYTFVIPSGW 282 (451)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEESCEEEEEECCCHHHHHHHHHHHHTTCCSSSCHHHHSSCCEEEEECTTCEEEECTTC
T ss_pred ccCCCCCCeEECCCCcchhhheecceEEEEEeCCCcccccccccccccccchhhhhccccccceEEEECCCcEEEeCCCc
Confidence 3456688999998654 467899999888876543 12346789999999999999
Q ss_pred eeEEEecCCC
Q 038563 134 VHFQMNVGDT 143 (198)
Q Consensus 134 ~H~~~N~g~~ 143 (198)
.|.+.|..+.
T Consensus 283 wH~V~nleds 292 (451)
T 2yu1_A 283 IHAVYTPTDT 292 (451)
T ss_dssp EEEEECSSCE
T ss_pred eEEEecCCCe
Confidence 9999997543
No 162
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=95.01 E-value=0.088 Score=44.14 Aligned_cols=54 Identities=11% Similarity=0.045 Sum_probs=40.7
Q ss_pred EeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEec
Q 038563 80 FDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNV 140 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~ 140 (198)
+.+|.....-. ..+-++++++|+..+.+ +++ ++.|++||++.||++..|.+...
T Consensus 214 ~G~Ges~~~~~--~~d~wiWqLEGss~Vt~---~~q--~~~L~~~DsLLIpa~~~y~~~r~ 267 (286)
T 2qnk_A 214 YGQGSSEGLRQ--NVDVWLWQLEGSSVVTM---GGR--RLSLAPDDSLLVLAGTSYAWERT 267 (286)
T ss_dssp ECSEEEEECCC--SSCEEEEEEESCEEEEE---TTE--EEEECTTEEEEECTTCCEEEEEC
T ss_pred EcCCccccccC--cCcEEEEEEcCceEEEE---CCe--EEeccCCCEEEecCCCeEEEEec
Confidence 66665432211 22678999999998776 466 57999999999999999998863
No 163
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=94.95 E-value=0.21 Score=35.05 Aligned_cols=64 Identities=14% Similarity=-0.045 Sum_probs=45.9
Q ss_pred EEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 79 DFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.+.||. -...+ .+.|++-|++|++++.+- |...+.++++||.|.+|++.--.++-. ++...++.
T Consensus 29 Vm~pGe-ytF~T--~~~E~M~vvsG~~~V~lp---g~~ew~~~~aGesF~Vpans~F~l~v~--~~~~YlC~ 92 (94)
T 2oyz_A 29 VMLPGE-YTFGT--QAPERMTVVKGALVVKRV---GEADWTTYSSGESFDVEGNSSFELQVK--DATAYLCE 92 (94)
T ss_dssp EECSEE-EEEEE--SSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECSSEEEEEEES--SCEEEEEE
T ss_pred EEeceE-EEEcC--CCeEEEEEEEeEEEEEcC---CCCcCEEECCCCEEEECCCCEEEEEEc--ccEeEEEE
Confidence 456664 23344 479999999999999874 332367899999999999987766653 44555544
No 164
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.89 E-value=0.12 Score=45.02 Aligned_cols=63 Identities=16% Similarity=0.220 Sum_probs=49.4
Q ss_pred EeCCcEecceeCCCCCE-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCC
Q 038563 80 FDVGGVNVPHFHPRATE-IAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGL 133 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~E-i~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~ 133 (198)
-++|+..+.|..+.++= +..+++|+=+..+..+. .+.+..++++||+++||.|.
T Consensus 154 Gp~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtLfIPsGW 233 (371)
T 3k3o_A 154 SVRDSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVDKCYKCSVKQGQTLFIPTGW 233 (371)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSTTGGGSCGGGTSSCCEEEEEETTCEEEECTTC
T ss_pred cCCCCCCCeEECCCCCceeEEEeeeEEEEEEECCCccccccccccccCCccchhhcccccCceEEEEECCCcEEEeCCCC
Confidence 34566789999987664 56899999888886432 13357899999999999999
Q ss_pred eeEEEecCC
Q 038563 134 VHFQMNVGD 142 (198)
Q Consensus 134 ~H~~~N~g~ 142 (198)
.|++.|..+
T Consensus 234 wH~V~nled 242 (371)
T 3k3o_A 234 IHAVLTPVD 242 (371)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999643
No 165
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=94.62 E-value=0.16 Score=44.63 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=49.2
Q ss_pred eCCcEecceeCCCCCE-EEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCCe
Q 038563 81 DVGGVNVPHFHPRATE-IAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGLV 134 (198)
Q Consensus 81 ~pg~~~~pH~Hp~a~E-i~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~~ 134 (198)
+.|...+.|+.+.++- +..+++|+=+..+..+. .+.+..++++||+++||.|..
T Consensus 183 p~gS~T~~HiD~~gts~w~~vv~GrK~w~L~PPt~~nl~ly~~~~~s~~~~e~~~~~~~~~~~~v~l~pGe~lfIPsGW~ 262 (397)
T 3kv9_A 183 VQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDENLARYESWSSSVTQSEVFFGDKVDKCYKCVVKQGHTLFVPTGWI 262 (397)
T ss_dssp CTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHTSGGGGGSCGGGGSSCCEEEEEETTCEEEECTTCE
T ss_pred CCCCCCCEEECCCCCceeeeecCceEEEEEeCCcccccccccccccCCCcchhhhccccCceEEEEECCCCEEEeCCCCe
Confidence 4466889999986654 56899999888887653 123567999999999999999
Q ss_pred eEEEecCC
Q 038563 135 HFQMNVGD 142 (198)
Q Consensus 135 H~~~N~g~ 142 (198)
|+..|..+
T Consensus 263 H~V~nled 270 (397)
T 3kv9_A 263 HAVLTSQD 270 (397)
T ss_dssp EEEEEEEE
T ss_pred EEccCCcC
Confidence 99999733
No 166
>3hqx_A UPF0345 protein aciad0356; DUF1255,PF06865,PSI2,MCSG, structural genomics, protein STRU initiative, midwest center for structural genomics; 1.66A {Acinetobacter SP} SCOP: b.82.1.0
Probab=94.24 E-value=0.24 Score=35.84 Aligned_cols=67 Identities=9% Similarity=0.080 Sum_probs=48.4
Q ss_pred EEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEE
Q 038563 79 DFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~ 151 (198)
.+.||. .|.+....+.|++-|++|++++.+- |...+..+++|+.|.+|++.--.++- .++...++.|
T Consensus 43 Vm~PGe-~~YtF~T~~~E~MevvsG~l~V~Lp---g~~eW~~~~aGesF~VpanssF~lkv--~~~~~Y~C~y 109 (111)
T 3hqx_A 43 VILPTE-QPLTFETHVPERMEIISGECRVKIA---DSTESELFRAGQSFYVPGNSLFKIET--DEVLDYVCHL 109 (111)
T ss_dssp EECCCS-SCEEEECSSCEEEEEEESEEEEEET---TCSSCEEEETTCEEEECTTCEEEEEC--SSCEEEEEEE
T ss_pred EEeccc-cceEEcCCCcEEEEEEEeEEEEEcC---CcccCEEeCCCCEEEECCCCcEEEEE--CcceeEEEEc
Confidence 356763 1234445589999999999999884 33336789999999999998877765 3456666544
No 167
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=94.09 E-value=0.25 Score=43.36 Aligned_cols=63 Identities=13% Similarity=0.222 Sum_probs=49.5
Q ss_pred EeCCcEecceeCCCCC-EEEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCC
Q 038563 80 FDVGGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGL 133 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~ 133 (198)
-+.|.....|..+.++ -+..+++|+=+..+..+. .+-+..++++||++++|.|.
T Consensus 181 Gp~gS~T~fHiD~~gTs~w~~vi~GrK~w~L~PPt~~nl~~y~~~~~s~~~~e~~~~~~~~~~~ev~l~pGEtlfIPsGW 260 (392)
T 3pua_A 181 CVKDSYTDFHIDSGGASAWYHVLKGEKTFYLIRPASANISLYERWRSASNHSEMFFADQVDKCYKCIVKQGQTLFIPSGW 260 (392)
T ss_dssp ECTTCEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSTTGGGSCGGGGSSCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCEeECCCCCceeeeeccceEEEEEECCCcccccchhhcccCcchhhhhhcccccceEEEEECCCcEEeeCCCc
Confidence 3556688999997655 467899999888876543 12356899999999999999
Q ss_pred eeEEEecCC
Q 038563 134 VHFQMNVGD 142 (198)
Q Consensus 134 ~H~~~N~g~ 142 (198)
.|++.|..+
T Consensus 261 wH~V~nled 269 (392)
T 3pua_A 261 IYATLTPVD 269 (392)
T ss_dssp EEEEEEEEE
T ss_pred eEEEecCCC
Confidence 999999743
No 168
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.13 E-value=0.26 Score=44.74 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=48.3
Q ss_pred EeCCcEecceeCCCCC-EEEEEEecEEEEEEEeCC-------------------------CeEEEEEEeCCcEEEECCCC
Q 038563 80 FDVGGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQ-------------------------NRIFAKVIEKGEVMVFPRGL 133 (198)
Q Consensus 80 l~pg~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~-------------------------~~~~~~~l~~Gd~~~iP~G~ 133 (198)
-+.|....+|.-+.++ -+.+|++|+=++.+..+. ++.+..++++||+++||.|.
T Consensus 303 g~~gS~Td~HiD~~gts~w~~v~~GrK~w~L~PPt~~nl~~y~~w~~s~~~~~wfgd~l~~~~~~v~l~pGEtlfIPsGW 382 (528)
T 3pur_A 303 GMAGSYTDFHVDFGGSSVYYHILKGEKIFYIAAPTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGW 382 (528)
T ss_dssp ECTTEEEEEECCGGGCEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHSSCCSCCGGGGTTTCCEEEEEETTCEEEECTTC
T ss_pred eCCCCCCCeeECCCCCceeEEEecceEEEEEeCCCccchhhhhhhccCCchhhhhcccccccEEEEEECCCCEEEecCCc
Confidence 3446678899887655 567899999888777653 12346799999999999999
Q ss_pred eeEEEecC
Q 038563 134 VHFQMNVG 141 (198)
Q Consensus 134 ~H~~~N~g 141 (198)
+|++.|..
T Consensus 383 ~HaV~tle 390 (528)
T 3pur_A 383 IHAVLTPV 390 (528)
T ss_dssp EEEEEEEE
T ss_pred eEEEecCC
Confidence 99999973
No 169
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=93.07 E-value=0.79 Score=38.37 Aligned_cols=78 Identities=17% Similarity=0.156 Sum_probs=52.1
Q ss_pred ceEEEEEEEeCCc-E--ecceeCCCCCEEEEEEe----cEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCc
Q 038563 72 GMSMVRADFDVGG-V--NVPHFHPRATEIAVVLE----GKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTW 144 (198)
Q Consensus 72 gls~~~~~l~pg~-~--~~pH~Hp~a~Ei~yVl~----G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~ 144 (198)
.+-|....+.||+ + -|||.|.+..|.+|-.+ |. .+.++.+.++.....++-||++++|...+|. ..|-+.
T Consensus 179 qllmg~evltpgg~WSSyPpHkHDrr~EeyyYF~l~~~gf-v~q~~g~p~Etrhi~V~n~daVlvP~wh~h~--~~G~~~ 255 (282)
T 1xru_A 179 QLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDAC-VFHMMGQPQETRHIVMHNEQAVISPSWSIHS--GVGTKA 255 (282)
T ss_dssp SCEEEEEEECTTCCEESCSEEECTTEEEEEEEESCCTTCC-EEEEEEETTEEEEEEECSSEEEEECTTCEEE--EEESSC
T ss_pred hEEEEEEEEeCCCCcCCCCCccCCCCceEEEEEEeCCCCE-EEEEeCCCCCeeEEEEECCCEEEeCCCCCCC--CCCccc
Confidence 5667777888887 4 49999987777776543 33 3334433344445678999999999656666 346666
Q ss_pred EEEEEEEe
Q 038563 145 ATILGSFD 152 (198)
Q Consensus 145 ~~~~~~~~ 152 (198)
-.+|.+.-
T Consensus 256 Y~ylwvMA 263 (282)
T 1xru_A 256 YTFIWGMV 263 (282)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEE
Confidence 55555554
No 170
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.92 E-value=0.45 Score=37.99 Aligned_cols=74 Identities=18% Similarity=0.172 Sum_probs=44.7
Q ss_pred EEEEEEEeCCcEecceeCCCCCE--EEEEEe--cEEEEEEEeCC------------------CeEEEEEEeCCcEEEECC
Q 038563 74 SMVRADFDVGGVNVPHFHPRATE--IAVVLE--GKIYSGFVDTQ------------------NRIFAKVIEKGEVMVFPR 131 (198)
Q Consensus 74 s~~~~~l~pg~~~~pH~Hp~a~E--i~yVl~--G~~~~~~~~~~------------------~~~~~~~l~~Gd~~~iP~ 131 (198)
.+-...+++|+...+|.|+++.= ++|+-. +.+.+.|.++. .......-++|++++||+
T Consensus 104 ~~W~~~~~~G~~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS 183 (216)
T 2rg4_A 104 DIWINILPEGGVHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWES 183 (216)
T ss_dssp EEEEEEECTTCCEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEET
T ss_pred eEEEEEcCCCCcccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECC
Confidence 45556789999999999975431 223321 11223333331 111235668999999999
Q ss_pred CCeeEEEe-cCCCcEEE
Q 038563 132 GLVHFQMN-VGDTWATI 147 (198)
Q Consensus 132 G~~H~~~N-~g~~~~~~ 147 (198)
-+.|...- .++++..-
T Consensus 184 ~l~H~V~p~~~~~~RiS 200 (216)
T 2rg4_A 184 WLRHEVPMNMAEEDRIS 200 (216)
T ss_dssp TSCEEECCCCSSSCEEE
T ss_pred CCEEeccCCCCCCCEEE
Confidence 99999864 34444333
No 171
>3eo6_A Protein of unknown function (DUF1255); AFE_2634, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 0.97A {Acidithiobacillus ferrooxidans ATCC23270}
Probab=92.79 E-value=0.55 Score=33.61 Aligned_cols=55 Identities=18% Similarity=0.111 Sum_probs=41.9
Q ss_pred EEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEe
Q 038563 79 DFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMN 139 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N 139 (198)
.+.||. .+....+.|++-|++|++++.+- |...+..+++|+.|.+|++.--.++-
T Consensus 42 Vm~PGe---Y~F~T~~~E~MevvsG~l~V~Lp---G~~eW~~~~aGesF~VpanssF~lkv 96 (106)
T 3eo6_A 42 LLHPGV---YTLSSEVAETIRVLSGMAYYHAE---GANDVQELHAGDSMVIPANQSYRLEV 96 (106)
T ss_dssp EECSEE---EEECCSSCEEEEEEEEEEEEECT---TCSSCEEEETTCEEEECSSSCEEEEE
T ss_pred EEeeeE---EEecCCCcEEEEEEEeEEEEECC---CCccCEEECCCCEEEECCCCcEEEEE
Confidence 355653 44555689999999999999874 33336799999999999998766654
No 172
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=92.51 E-value=1.3 Score=32.41 Aligned_cols=42 Identities=19% Similarity=0.112 Sum_probs=34.6
Q ss_pred EEEEEecEEEEEEEeCCCe---EEEEEEeCCcEEEECCCCeeEEE
Q 038563 97 IAVVLEGKIYSGFVDTQNR---IFAKVIEKGEVMVFPRGLVHFQM 138 (198)
Q Consensus 97 i~yVl~G~~~~~~~~~~~~---~~~~~l~~Gd~~~iP~G~~H~~~ 138 (198)
.+-|++|++++...++++. .....+.+|+..+||+...|.+.
T Consensus 41 kL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe 85 (119)
T 3dl3_A 41 QICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIE 85 (119)
T ss_dssp EEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEE
T ss_pred EEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEE
Confidence 5689999999987665442 23468899999999999999999
No 173
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=92.36 E-value=1.2 Score=37.75 Aligned_cols=58 Identities=17% Similarity=0.288 Sum_probs=41.6
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQ 137 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~ 137 (198)
-.++.++++.++... ....+..++.|++|++++.. +++ ...|++||.+++|++.-.+.
T Consensus 250 ~F~~~~~~~~~~~~~---~~~~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~~vpa~~~~~~ 307 (319)
T 1qwr_A 250 YFSVYKWDINGEAEM---AQDESFLICSVIEGSGLLKY---EDK--TCPLKKGDHFILPAQMPDFT 307 (319)
T ss_dssp SCEEEEEEEEEEEEE---CCCSSCEEEEEEEEEEEEEE---TTE--EEEEETTCEEEECTTCCCEE
T ss_pred EEEEEEEEECCceEE---ccCCccEEEEEEcCeEEEEE---CCE--EEEEcCCcEEEEeCCCceEE
Confidence 357777777644322 22357889999999998764 355 46899999999999874433
No 174
>1znp_A Hypothetical protein ATU3615; NESG, ATR55, Q8U9W0, structural genomics, PSI, protein struc initiative; 2.50A {Agrobacterium tumefaciens str} SCOP: b.82.1.16
Probab=91.79 E-value=3.4 Score=31.45 Aligned_cols=89 Identities=13% Similarity=0.052 Sum_probs=60.5
Q ss_pred CCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecE-EEEEEEeCCCeEEEEEEe----CCc-
Q 038563 52 ETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGK-IYSGFVDTQNRIFAKVIE----KGE- 125 (198)
Q Consensus 52 ~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~-~~~~~~~~~~~~~~~~l~----~Gd- 125 (198)
|.||..+........+-.. -.+....-|.+|.....|.=.++.|+.+-..|. +++.+.+++|.....+|. +|+
T Consensus 20 PEGG~yrEt~Rs~~~~~R~-~~TaIYfLL~~g~~S~wHRv~~sdEiW~~h~G~pL~l~~~~~dg~~~~~~LG~d~~~Ge~ 98 (154)
T 1znp_A 20 PEGGFYHQTFRDKAGGERG-HSTAIYYLLEKGVRSHWHRVTDAVEVWHYYAGAPIALHLSQDGREVQTFTLGPAILEGER 98 (154)
T ss_dssp TTSSEEEEEEECSSSTTTC-SCEEEEEEEESSCCEEEEEETTSCEEEEEEEESCEEEEEESSSSCCEEEEESSCTTTTEE
T ss_pred CCCccEEEEEeCCCCCCCc-ceeEEEEEecCCCCCcceeccCCCEEEEeECCCCEEEEEEcCCCcEEEEEeCCCcccCcc
Confidence 7899988877554322222 244445557777765444322699999999998 778788887765555564 566
Q ss_pred -EEEECCCCeeEEEecC
Q 038563 126 -VMVFPRGLVHFQMNVG 141 (198)
Q Consensus 126 -~~~iP~G~~H~~~N~g 141 (198)
-++||+|........|
T Consensus 99 pQ~vVP~G~WqaA~~~g 115 (154)
T 1znp_A 99 PQVIVPANCWQSAESLG 115 (154)
T ss_dssp SEEEECTTCEEEEEESS
T ss_pred cEEEEcCCEEEEeeECC
Confidence 4899999998877654
No 175
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=91.40 E-value=1.5 Score=38.91 Aligned_cols=76 Identities=21% Similarity=0.196 Sum_probs=47.7
Q ss_pred ceEEEEEEEe--CCcEecceeCCCCCEEEEEEecEEEEEEEeCCC-eEEEEEEeCCcEEEECCCCeeEEEecC---CCcE
Q 038563 72 GMSMVRADFD--VGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN-RIFAKVIEKGEVMVFPRGLVHFQMNVG---DTWA 145 (198)
Q Consensus 72 gls~~~~~l~--pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~-~~~~~~l~~Gd~~~iP~G~~H~~~N~g---~~~~ 145 (198)
..++.++++. ++.....-.+ ....+++|++|++++... ++ +. ...|++||++++|++..-.+.+.+ .+.+
T Consensus 356 eF~v~~~~~~~~~~~~~~~~~~-~~~~illv~~G~g~i~~~--~~~~~-~~~l~~G~~~fvpa~~~~~i~g~~~~~~~~~ 431 (440)
T 1pmi_A 356 EFSVLQTIFDKSKGGKQVIEGL-NGPSIVIATNGKGTIQIT--GDDST-KQKIDTGYVFFVAPGSSIELTADSANQDQDF 431 (440)
T ss_dssp SCEEEEEECCTTTCCEEEECCC-SSCEEEEEEESEEEEEET--TCGGG-CEEEETTCEEEECTTCCEEEEECSSCCSSCC
T ss_pred eEEEEEEEecCCCCceeEEecC-CCcEEEEEEeCeEEEEeC--Ccccc-eEEeccCCEEEEeCCCcEEEEEecccCCCcE
Confidence 4678888887 4432221122 578899999999998652 22 10 048999999999999433344441 3445
Q ss_pred EEEEEE
Q 038563 146 TILGSF 151 (198)
Q Consensus 146 ~~~~~~ 151 (198)
.++.++
T Consensus 432 ~~~~a~ 437 (440)
T 1pmi_A 432 TTYRAF 437 (440)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555544
No 176
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=91.14 E-value=1.5 Score=35.67 Aligned_cols=68 Identities=10% Similarity=-0.001 Sum_probs=47.7
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
.+.+..++|++|+....-..+...-++||++|++++ +|+ .|++||.+++..+..-.+.+ .+++.++.+
T Consensus 159 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~v~~G~v~v-----~g~----~l~~gd~~~~~~~~~l~l~a--~~~a~~Ll~ 226 (242)
T 1tq5_A 159 DMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI-----NGV----KASTSDGLAIWDEQAISIHA--DSDSEVLLF 226 (242)
T ss_dssp SCEEEEEEECTTCEEEECCCTTCEEEEEEEESEEEE-----TTE----EEETTCEEEEESCSCEEEEE--SSSEEEEEE
T ss_pred CCEEEEEEECCCCEEEeecCCCcEEEEEEccCcEEE-----CCE----EeCCCCEEEECCCCeEEEEe--CCCCEEEEE
Confidence 678888999999976444444445579999999876 243 68999999998765444554 245555543
No 177
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=91.05 E-value=3.2 Score=34.34 Aligned_cols=71 Identities=17% Similarity=0.118 Sum_probs=48.2
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECC-C----CeeEEEecCCCcE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPR-G----LVHFQMNVGDTWA 145 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~-G----~~H~~~N~g~~~~ 145 (198)
..+.+..++|++|+.......+...-++||++|++++. |. ...|++||.+++.. + ..-.+.+. +++
T Consensus 165 ~~~~~~~~~L~~g~~~~~~~~~~~~~~lyv~~G~v~v~-----g~--~~~l~~~d~~~~~~~~~~~~~~l~l~a~--~~a 235 (277)
T 2p17_A 165 VPVTMVEMIVEPGTTVVQDLPGHYNGFLYILEGSGVFG-----AD--NIEGKAGQALFFSRHNRGEETELNVTAR--EKL 235 (277)
T ss_dssp SCEEEEEEEECTTCEEEEEEETTCEEEEEEEESEEEET-----TT--TEEEETTEEEEECCCCTTCEEEEEEEES--SSE
T ss_pred CCCEEEEEEECCCCEEEeccCCCCEEEEEEEeCeEEEC-----CC--ceEeCCCcEEEEcCCCCCccceEEEEeC--CCc
Confidence 37889999999999765444433456899999998752 41 12689999999986 5 33344443 346
Q ss_pred EEEEE
Q 038563 146 TILGS 150 (198)
Q Consensus 146 ~~~~~ 150 (198)
.++.+
T Consensus 236 ~~Ll~ 240 (277)
T 2p17_A 236 RLLLY 240 (277)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55543
No 178
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=90.76 E-value=0.99 Score=37.88 Aligned_cols=80 Identities=15% Similarity=0.162 Sum_probs=44.6
Q ss_pred ceEEEEEEEeCCc-E--ecceeCCCCCEEEEEEe----cEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCc
Q 038563 72 GMSMVRADFDVGG-V--NVPHFHPRATEIAVVLE----GKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTW 144 (198)
Q Consensus 72 gls~~~~~l~pg~-~--~~pH~Hp~a~Ei~yVl~----G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~ 144 (198)
.+-+....+.||+ + -|||.|.+..|.+|--+ |. .+.+..+-++.+...++-||++++|+|..|. ..|...
T Consensus 179 qllmg~evltpGg~WSSyPpHkHDrr~E~yyYF~l~p~~~-v~h~~g~pdEtrh~~V~n~daVlvP~wgyHp--~~Gt~~ 255 (289)
T 1ywk_A 179 QLQMGYTILEPGSAWNTMPCHTHERRMEAYVYFDMEEDTR-IFHMMGKPDETKHLVMSNEQAAISPSWSIHS--GVGTSN 255 (289)
T ss_dssp SCEEEEEEECTTCCCCC--------CEEEEEEESCCTTCC-EEEEESSTTSCEEEEECTTEEEEECTTSCCC--EEESSC
T ss_pred eEEEEEEEEeCCCCcCCCCCccCCCCCeeEEEEEeCCCCe-EEEECCCCCceEEEEEECCCEEEeCCCcccC--CCCCcC
Confidence 4667777888887 3 59999987777776433 22 2233322244445688999999999998896 234444
Q ss_pred EEEEEEEeCC
Q 038563 145 ATILGSFDSQ 154 (198)
Q Consensus 145 ~~~~~~~~s~ 154 (198)
-.+|.+.--+
T Consensus 256 Y~ylwvMAG~ 265 (289)
T 1ywk_A 256 YSFIWAMCGE 265 (289)
T ss_dssp CEEEEEEECC
T ss_pred eEEEEEEEcC
Confidence 4455555433
No 179
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=89.67 E-value=1.1 Score=39.22 Aligned_cols=57 Identities=12% Similarity=0.129 Sum_probs=41.2
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHF 136 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~ 136 (198)
-.++.++++.++... ..+ .+..++.|++|++++.. +++ ...|++||++++|++...+
T Consensus 323 ~F~v~~~~l~~~~~~--~~~-~~~~il~v~~G~~~l~~---~~~--~~~l~~G~~~fvpa~~~~~ 379 (394)
T 2wfp_A 323 DFAFSLHDLALQETS--IGQ-HSAAILFCVEGEAVLRK---DEQ--RLVLKPGESAFIGADESPV 379 (394)
T ss_dssp SCEEEEEECCSSCEE--ECC-SSCEEEEEEEEEEEEEE---TTE--EEEECTTCEEEECGGGCCE
T ss_pred EEEEEEEEEcCCeEE--ecC-CCcEEEEEEeceEEEEE---CCe--EEEEccCcEEEEeCCCceE
Confidence 467777888755332 234 56799999999998654 233 4689999999999985433
No 180
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=89.07 E-value=2.9 Score=35.04 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=40.4
Q ss_pred ceEEEEEEEeCCcEecceeCCCCC-EEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRAT-EIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQM 138 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~-Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~ 138 (198)
-.++.++++.+.... .. .+. .++.|++| +++.. +++ ...|++||++++|++.-.+..
T Consensus 229 ~F~v~~~~~~~~~~~---~~-~~~~~il~v~~G-~~i~~---~~~--~~~l~~G~~~~ipa~~~~~~i 286 (300)
T 1zx5_A 229 NFGLEVVDVTGTAEI---KT-GGVMNILYAAEG-YFILR---GKE--TADLHRGYSCLVPASTDSFTV 286 (300)
T ss_dssp SEEEEEEEEEEEEEE---EC-CSBCEEEEEEES-CEEEE---SSS--EEEECTTCEEEECTTCCEEEE
T ss_pred eEEEEEEEECCceEE---ec-CCceEEEEEccc-EEEEe---CCe--EEEEccceEEEEeCCCceEEE
Confidence 367777777742222 33 567 89999999 88764 344 357999999999998855443
No 181
>1j1l_A Pirin; beta sandwich, cupin, iron, metatl binding protein; 2.10A {Homo sapiens} SCOP: b.82.1.12 PDB: 3acl_A*
Probab=88.44 E-value=4.6 Score=33.66 Aligned_cols=77 Identities=14% Similarity=0.071 Sum_probs=50.8
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~ 150 (198)
..+.+..++|++|+.......+...-++||++|++.+. +......+.++.++++..|..-.+.+.+.+++.++.+
T Consensus 167 ~~~~~~~~~l~~g~~~~~~l~~~~~~~lyv~~G~v~v~-----g~~~~~~~~~~~~~~l~~gd~~~i~~~a~~~a~~LLl 241 (290)
T 1j1l_A 167 TPTLYLDFKLDPGAKHSQPIPKGWTSFIYTISGDVYIG-----PDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLI 241 (290)
T ss_dssp SCEEEEEEEECTTCEEEEECCTTCEEEEEEEESCEEES-----CTTSCEEECTTEEEEECSCSEEEEECCSSSCEEEEEE
T ss_pred CCcEEEEEEECCCCEEEeecCCCCEEEEEEEeCeEEEC-----CcccceeccCceEEEecCCCEEEEEEcCCCCcEEEEE
Confidence 36888889999999765444434456899999999863 2100124677777777777665566545567766654
Q ss_pred Ee
Q 038563 151 FD 152 (198)
Q Consensus 151 ~~ 152 (198)
-.
T Consensus 242 ~G 243 (290)
T 1j1l_A 242 AG 243 (290)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 182
>2pqq_A Putative transcriptional regulator; APC7345, streptomyces coelicolor structural genomics, PSI-2, protein structure initiative; 2.00A {Streptomyces coelicolor A3}
Probab=88.07 E-value=1.4 Score=31.19 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=38.6
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
+....+++|..+-.. ......+++|++|.+++...+.+|+ .....+.+||++-
T Consensus 28 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 81 (149)
T 2pqq_A 28 MSEVTLARGDTLFHE-GDPGDRLYVVTEGKVKLHRTSPDGRENMLAVVGPSELIG 81 (149)
T ss_dssp CEEEEECTTCEEECT-TSEECEEEEEEESCEEEEEECTTSSEEEEEEECTTCEES
T ss_pred ceEEEeCCCCEEECC-CCCCCeEEEEEecEEEEEEECCCCcEEEEEEcCCcCEec
Confidence 345688888876332 2235779999999999988877775 3457889999873
No 183
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=87.62 E-value=3.8 Score=33.55 Aligned_cols=70 Identities=11% Similarity=0.047 Sum_probs=46.9
Q ss_pred ceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 72 GMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 72 gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
.+.+..++|++|........... -++||++|++++. +.++. ...|.+||.+++-.+..=.+.+ .+++.++
T Consensus 181 ~~~~~~~~L~~g~~~~~~~~~~~-~~l~v~~G~v~v~--g~~~~--~~~l~~gd~~~l~~~~~l~l~a--~~~a~~L 250 (256)
T 2vec_A 181 QVWLHHIVLDKGESANFQLHGPR-AYLQSIHGKFHAL--THHEE--KAALTCGDGAFIRDEANITLVA--DSPLRAL 250 (256)
T ss_dssp SCEEEEEEECTTCEEEEECSSSE-EEEEEEESCEEEE--ETTEE--EEEECTTCEEEEESCSEEEEEE--SSSEEEE
T ss_pred CcEEEEEEECCCCEEEEecCCCe-EEEEEEECEEEEC--Ccccc--ceEECCCCEEEECCCCeEEEEe--CCCCEEE
Confidence 67888899999997655544333 6889999998864 21112 2479999999997665434444 2445544
No 184
>3mdp_A Cyclic nucleotide-binding domain (CNMP-BD) protei; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Geobacter metallireducens}
Probab=87.53 E-value=1.1 Score=31.60 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=34.2
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EE---EEEEeCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IF---AKVIEKGEVMV 128 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~---~~~l~~Gd~~~ 128 (198)
+....+++|..+-.- ...+..+++|++|.+++...+++|+ .. ...+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~~~~G~~fG 85 (142)
T 3mdp_A 29 SEEKSFPTGSVIFKE-NSKADNLMLLLEGGVELFYSNGGAGSAANSTVCSVVPGAIFG 85 (142)
T ss_dssp EEEEEECTTCEEECT-TSBCCEEEEEEESCEEEECC---------CEEEEECTTCEEC
T ss_pred hcEEecCCCCEEEeC-CCCCCcEEEEEeCEEEEEEECCCCCceEeeeEEEecCCCEec
Confidence 455678888865322 2346889999999999987766664 33 46789999874
No 185
>3dn7_A Cyclic nucleotide binding regulatory protein; structural genomics, APC88869, cyclic nucleotide binding REG protein, PSI-2; 1.80A {Cytophaga hutchinsonii}
Probab=87.29 E-value=2.7 Score=31.39 Aligned_cols=52 Identities=8% Similarity=-0.073 Sum_probs=38.8
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
....+++|..+-.- ......+++|++|.+++...+++|+ .....+.+||++-
T Consensus 31 ~~~~~~~g~~l~~~-G~~~~~~y~i~~G~v~~~~~~~~G~e~~~~~~~~g~~~g 83 (194)
T 3dn7_A 31 QLKKVRKKETLLKT-GEICRINYFVVKGCLRLFFIDEKGIEQTTQFAIENWWLS 83 (194)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEC
T ss_pred EEEEEcCCCEEECC-CCeeeEEEEeecCeEEEEEECCCCCEEEEEEccCCcEEe
Confidence 35678888865222 2236789999999999998888875 3456789999985
No 186
>2oz6_A Virulence factor regulator; winged helix, helix-turn-helix, transcription factor, CAMP-B proteins, CAMP receptor protein; HET: CMP; 2.80A {Pseudomonas aeruginosa} SCOP: a.4.5.4 b.82.3.2
Probab=87.26 E-value=2.7 Score=31.66 Aligned_cols=52 Identities=12% Similarity=0.228 Sum_probs=38.5
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
....+++|..+-. -......+++|++|.+++...+++|+ .....+.+||++-
T Consensus 14 ~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 66 (207)
T 2oz6_A 14 HRRRYTAKSTIIY-AGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFG 66 (207)
T ss_dssp EEEEECTTCEEEC-TTSBCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEES
T ss_pred ceEEECCCCEEEc-CCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCCcc
Confidence 3457888886632 22246789999999999998887775 3557889999884
No 187
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=87.19 E-value=10 Score=31.34 Aligned_cols=71 Identities=8% Similarity=0.019 Sum_probs=48.1
Q ss_pred eEEEEEEEeCCcEecceeCCCCCEEE-EEEecEEEEEEEeCCCeEEEEEEeC--------CcEEEECCCCeeEEEecCCC
Q 038563 73 MSMVRADFDVGGVNVPHFHPRATEIA-VVLEGKIYSGFVDTQNRIFAKVIEK--------GEVMVFPRGLVHFQMNVGDT 143 (198)
Q Consensus 73 ls~~~~~l~pg~~~~pH~Hp~a~Ei~-yVl~G~~~~~~~~~~~~~~~~~l~~--------Gd~~~iP~G~~H~~~N~g~~ 143 (198)
+++.+++|++|.......- + .|+. +.+.|++.+.+ +|+.+...-.+ .|++++|+|.--.+...+
T Consensus 29 ~~f~~~~L~~Ge~~~~~~~-~-~E~~iv~l~G~~~V~~---~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a~~-- 101 (270)
T 2qjv_A 29 VGFDVWQLXAGESITLPSD-E-RERCLVLVAGLASVXA---ADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTAET-- 101 (270)
T ss_dssp CEEEEEEECTTCEEEECCS-S-EEEEEEEEESCEEEEE---TTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEESS--
T ss_pred eEEEEEEecCCCEEEecCC-C-cEEEEEEecceEEEEE---CCEEEeccccccccccCCCCcEEEECCCCEEEEEecC--
Confidence 6777889999998877765 3 4554 56889999886 36533221233 589999999955565544
Q ss_pred cEEEEEE
Q 038563 144 WATILGS 150 (198)
Q Consensus 144 ~~~~~~~ 150 (198)
++.++..
T Consensus 102 ~~~~~v~ 108 (270)
T 2qjv_A 102 DLELAVC 108 (270)
T ss_dssp SEEEEEE
T ss_pred CceEEEE
Confidence 5665543
No 188
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=86.60 E-value=3.3 Score=31.17 Aligned_cols=52 Identities=8% Similarity=-0.024 Sum_probs=39.3
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.- -..+..+++|++|.+++...+++|+ .....+.+||++
T Consensus 62 ~~~~~~~~ge~i~~~-G~~~~~ly~I~~G~v~v~~~~~~g~~~~~~~~~~G~~f 114 (187)
T 3gyd_A 62 MQCYAAPRDCQLLTE-GDPGDYLLLILTGEVNVIKDIPNKGIQTIAKVGAGAII 114 (187)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEEEEETTTEEEEEEEEETTCEE
T ss_pred cEEEEeCCCCEEEcC-CCCCCeEEEEEeCEEEEEEECCCCCeEEEEEccCCCee
Confidence 445678888875332 2246789999999999998887775 345789999987
No 189
>3fx3_A Cyclic nucleotide-binding protein; helix_TURN_helix, CAMP regulatory protein, structural genomi 2, protein structure initiative; 2.20A {Ruegeria pomeroyi} PDB: 3h3z_A*
Probab=86.56 E-value=2.9 Score=32.35 Aligned_cols=51 Identities=22% Similarity=0.293 Sum_probs=38.6
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~ 127 (198)
....+++|..+-.- ......+++|++|.+.+...+++|+ .....+.+||++
T Consensus 35 ~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 86 (237)
T 3fx3_A 35 VWRSYDRGETLFLQ-EEKAQAIHVVIDGWVKLFRMTPTGSEAVVSVFTRGESF 86 (237)
T ss_dssp EEEEECTTCEEECT-TSCCCEEEEEEESEEEEEEECTTSCEEEEEEEETTEEE
T ss_pred EEEEECCCCEEEcC-CCccceEEEEEeeEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 45678888876332 2236789999999999998888775 345788999988
No 190
>3dv8_A Transcriptional regulator, CRP/FNR family; cyclic nucleotide-binding domain, structural genomics, joint for structural genomics; 2.55A {Eubacterium rectale atcc 33656}
Probab=86.51 E-value=3.4 Score=31.35 Aligned_cols=117 Identities=11% Similarity=0.136 Sum_probs=72.3
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEEC-----CC--CeeEEEecCCCcEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFP-----RG--LVHFQMNVGDTWATI 147 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP-----~G--~~H~~~N~g~~~~~~ 147 (198)
....+++|..+-..-. ....+++|++|.+.+...+++|+ .....+.+||++.+. .+ ..+.... .+++.+
T Consensus 27 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~a--~~~~~~ 103 (220)
T 3dv8_A 27 ITQHVKKGTIIHNGNM-DCTGLLLVKSGQLRTYILSDEGREITLYRLFDMDMCLLSASCIMRSIQFEVTIEA--EKDTDL 103 (220)
T ss_dssp EEEEECTTCEEEEGGG-CCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESGGGGGGCTTCCCCCEEEE--SSCEEE
T ss_pred ceEEeCCCCEEECCCC-CcceEEEEEeceEEEEEECCCCCEEEEEecCCCCeeehhHHHHhCCCCCceEEEE--eeeeEE
Confidence 4567888887633322 46789999999999998888875 345678999996321 22 2333443 445555
Q ss_pred EEEEeC-------CCCceeeec----------------------------------hhhhc---cCCCHHHHHHHhCCCH
Q 038563 148 LGSFDS-------QNPGLQKIP----------------------------------SAVFG---SNIKEELLEKAFGLTP 183 (198)
Q Consensus 148 ~~~~~s-------~~pg~~~~~----------------------------------~~~f~---~~~p~~vla~af~v~~ 183 (198)
+.+-.. .+|.+.... ....+ -.++.+-||..+|+++
T Consensus 104 ~~i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr 183 (220)
T 3dv8_A 104 WIIPAEIYKGIMKDSAPVANYTNELMATRFSDVMWLIEQIMWKSLDKRVASFLLEETSIEGTNELKITHETIANHLGSHR 183 (220)
T ss_dssp EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTSSEECCCHHHHHHHHTCCH
T ss_pred EEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcCCceecCCHHHHHHHhCCCH
Confidence 544211 233221110 01111 1578888999999999
Q ss_pred HHHHHHhhhcCC
Q 038563 184 KEIAKLRKRFAP 195 (198)
Q Consensus 184 ~~v~~l~~~~~~ 195 (198)
+.+.++.+.+..
T Consensus 184 ~tvsR~l~~L~~ 195 (220)
T 3dv8_A 184 EVITRMLRYFQV 195 (220)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988776543
No 191
>3ryp_A Catabolite gene activator; CAMP receptor protein (CRP), allostery, DNA binding cyclic A transcription regulator; HET: CMP; 1.60A {Escherichia coli} PDB: 2cgp_A* 3hif_A 1g6n_A* 3ryr_A* 1i5z_A* 1j59_A* 1lb2_A* 1run_A* 1zrc_A* 1zrd_A* 1zre_A* 1zrf_A* 2gzw_A* 2wc2_A 3iyd_G* 3n4m_A* 3qop_A* 3rdi_A* 3rou_A* 3rpq_A* ...
Probab=85.98 E-value=3.4 Score=31.13 Aligned_cols=116 Identities=9% Similarity=0.152 Sum_probs=71.4
Q ss_pred EEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEEC----CC--CeeEEEecCCCcEEEEE
Q 038563 77 RADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFP----RG--LVHFQMNVGDTWATILG 149 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP----~G--~~H~~~N~g~~~~~~~~ 149 (198)
...+++|..+-..-- ....+++|++|.+++...+++|+ .....+.+||++-.. .+ ..+.... .+++.++.
T Consensus 21 ~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~a--~~~~~v~~ 97 (210)
T 3ryp_A 21 IHKYPSKSTLIHQGE-KAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEVAE 97 (210)
T ss_dssp EEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCSSEEEE--SSCEEEEE
T ss_pred EEEeCCCCEEECCCC-CCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeeeHHHhcCCCCceEEEEE--CCcEEEEE
Confidence 457888886533222 36789999999999998888775 345678999988432 12 2233443 34555554
Q ss_pred EEe-------CCCCceeeec---------------------------hhhh-------c---------cCCCHHHHHHHh
Q 038563 150 SFD-------SQNPGLQKIP---------------------------SAVF-------G---------SNIKEELLEKAF 179 (198)
Q Consensus 150 ~~~-------s~~pg~~~~~---------------------------~~~f-------~---------~~~p~~vla~af 179 (198)
+=. ..+|.+.... ..++ + -.++.+-||..+
T Consensus 98 i~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~iA~~l 177 (210)
T 3ryp_A 98 ISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIV 177 (210)
T ss_dssp EEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTTSTTCEEETTEEEEECCHHHHHHHH
T ss_pred EcHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHhcCcCCCCCceEeccCHHHHHHHh
Confidence 421 1234332100 0000 0 046788999999
Q ss_pred CCCHHHHHHHhhhcCC
Q 038563 180 GLTPKEIAKLRKRFAP 195 (198)
Q Consensus 180 ~v~~~~v~~l~~~~~~ 195 (198)
|++++.+.++.+.+..
T Consensus 178 g~sr~tvsR~l~~L~~ 193 (210)
T 3ryp_A 178 GCSRETVGRILKMLED 193 (210)
T ss_dssp TCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 9999999988776543
No 192
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=85.52 E-value=4.1 Score=29.46 Aligned_cols=51 Identities=8% Similarity=-0.031 Sum_probs=37.1
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~ 127 (198)
+....+++|..+-. -...+..+++|++|.+.+.. +.+|+ .....+.+||++
T Consensus 61 ~~~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~~-~~~g~~~~~~~~~~G~~f 112 (161)
T 3idb_B 61 MFEKLVKEGEHVID-QGDDGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSF 112 (161)
T ss_dssp CEEEEECTTCEEEC-TTSCCCEEEEEEESEEEEEE-EETTEEEEEEEEESCCEE
T ss_pred cceeEeCCCCEEEe-CCCCCcEEEEEEeCEEEEEE-cCCCCeEEEEEcCCCCEe
Confidence 34567888887533 23346889999999999988 55664 445678999976
No 193
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=85.45 E-value=2.7 Score=31.86 Aligned_cols=117 Identities=12% Similarity=0.047 Sum_probs=71.9
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEEC-----CCCeeEEEecCCCcEEEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFP-----RGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP-----~G~~H~~~N~g~~~~~~~~ 149 (198)
....+++|..+-.. ......+++|++|.+.+...+++|+ .....+.+||++-.. .-..+.... .+++.++.
T Consensus 23 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~a--~~~~~v~~ 99 (216)
T 4ev0_A 23 QRRLYPQGKPIFYQ-GDLGQALYLVASGKVRLFRTHLGGQERTLALLGPGELFGEMSLLDEGERSASAVA--VEDTELLA 99 (216)
T ss_dssp EEEEECTTCEEECT-TCBCCEEEEEEESCEEEEEECSSSCEEEEEEECTTCEECHHHHHHCCBCSSEEEE--SSSEEEEE
T ss_pred eEEEeCCCCEEEeC-CCCCCEEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEeehhhcCCCCcceEEEE--cCCEEEEE
Confidence 44678888865332 2236789999999999998877775 345789999987421 112333443 34455554
Q ss_pred EEeC-------CCCceeeec---------------------------hhhh----------ccCCCHHHHHHHhCCCHHH
Q 038563 150 SFDS-------QNPGLQKIP---------------------------SAVF----------GSNIKEELLEKAFGLTPKE 185 (198)
Q Consensus 150 ~~~s-------~~pg~~~~~---------------------------~~~f----------~~~~p~~vla~af~v~~~~ 185 (198)
+-.. .+|.+.... ..++ .-.++.+-||..+|++++.
T Consensus 100 i~~~~~~~l~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 179 (216)
T 4ev0_A 100 LFREDYLALIRRLPLVAHNLAALLARRLREADLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRET 179 (216)
T ss_dssp EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHH
T ss_pred EcHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHH
Confidence 3211 223222100 0111 1147888999999999999
Q ss_pred HHHHhhhcCC
Q 038563 186 IAKLRKRFAP 195 (198)
Q Consensus 186 v~~l~~~~~~ 195 (198)
+.++.+.+..
T Consensus 180 vsR~l~~l~~ 189 (216)
T 4ev0_A 180 VSRVLHALAE 189 (216)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888776543
No 194
>3iwz_A CAP-like, catabolite activation-like protein; XCC, pathogenicity, CRP, CLP, C-DI-GMP receptor, quorum SENS binding, transcription; 2.30A {Xanthomonas campestris PV}
Probab=84.75 E-value=3.1 Score=31.83 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=39.1
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
....+++|..+-.. ......+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 35 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G 87 (230)
T 3iwz_A 35 HRRRYPTRTDVFRP-GDPAGTLYYVISGSVSIIAEEDDDRELVLGYFGSGEFVG 87 (230)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEES
T ss_pred eEEEeCCCCEEECC-CCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEE
Confidence 45678888875332 2236789999999999998888875 3457789999884
No 195
>1zyb_A Transcription regulator, CRP family; NP_813211.1, structural genomics, joint center for structura genomics, JCSG; 2.15A {Bacteroides thetaiotaomicron} SCOP: a.4.5.4 b.82.3.2
Probab=84.51 E-value=2.7 Score=32.62 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=72.3
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEEC----CC--CeeEEEecCCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFP----RG--LVHFQMNVGDTWATI 147 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP----~G--~~H~~~N~g~~~~~~ 147 (198)
+....+++|..+-.--. ....+++|++|.+++...+++|+ .....+.+||++-.. .. ..+.... .+++.+
T Consensus 43 ~~~~~~~~ge~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~l~~~~~G~~fG~~~~~~~~~~~~~~~~A--~~~~~v 119 (232)
T 1zyb_A 43 LHFIKHKAGETIIKSGN-PCTQLCFLLKGEISIVTNAKENIYTVIEQIEAPYLIEPQSLFGMNTNYASSYVA--HTEVHT 119 (232)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESEEEEEEECGGGSCEEEEEEESSEEECGGGGSSSCCBCSSEEEE--SSCEEE
T ss_pred cEEEEECCCCEEECCCC-cccEEEEEEeeEEEEEEECCCCCEEEEEEccCCCeeeehHHhCCCCCCceEEEE--ccceEE
Confidence 45678889887633222 46789999999999988777764 445688999987322 21 3344444 345555
Q ss_pred EEEEe-------CCCCceeeec---------------------------hhhhc-----------cCCCHHHHHHHhCCC
Q 038563 148 LGSFD-------SQNPGLQKIP---------------------------SAVFG-----------SNIKEELLEKAFGLT 182 (198)
Q Consensus 148 ~~~~~-------s~~pg~~~~~---------------------------~~~f~-----------~~~p~~vla~af~v~ 182 (198)
+.+-. ..+|.+.... ..++- -.++.+-||..+|++
T Consensus 120 ~~i~~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~t~~~lA~~lG~s 199 (232)
T 1zyb_A 120 VCISKAFVLSDLFRYDIFRLNYMNIVSNRAQNLYSRLWDEPTLDLKSKIIRFFLSHCEKPQGEKTFKVKMDDLARCLDDT 199 (232)
T ss_dssp EEEEHHHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHTTSCCCCSHHHHHHHHHHTTCSSSSSCEEEECCHHHHHHHHTSC
T ss_pred EEEEHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHhhcCCeEEecCCHHHHHHHhCCC
Confidence 44321 1233221100 01111 136888999999999
Q ss_pred HHHHHHHhhhcC
Q 038563 183 PKEIAKLRKRFA 194 (198)
Q Consensus 183 ~~~v~~l~~~~~ 194 (198)
++.+.++.+.+.
T Consensus 200 r~tvsR~l~~l~ 211 (232)
T 1zyb_A 200 RLNISKTLNELQ 211 (232)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHH
Confidence 999888877654
No 196
>3d0s_A Transcriptional regulatory protein; CAMP receptor protein (CRP), dimer, inactive(APO, unliganded allostery, DNA binding, cyclic AMP; 2.00A {Mycobacterium tuberculosis} PDB: 3i54_A* 3i59_A* 3mzh_A* 3h3u_A* 3r6s_A*
Probab=84.35 E-value=3.6 Score=31.49 Aligned_cols=115 Identities=12% Similarity=0.155 Sum_probs=71.1
Q ss_pred EEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEEC-----CCCeeEEEecCCCcEEEEEE
Q 038563 77 RADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFP-----RGLVHFQMNVGDTWATILGS 150 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP-----~G~~H~~~N~g~~~~~~~~~ 150 (198)
...+++|..+-.- ......+++|++|.+.+...+++|+ .....+.+||++-.. ....+.... .+++.++.+
T Consensus 31 ~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~G~~~~~~~~~~~~~~~A--~~~~~v~~i 107 (227)
T 3d0s_A 31 PVDFPRGHTVFAE-GEPGDRLYIIISGKVKIGRRAPDGRENLLTIMGPSDMFGELSIFDPGPRTSSATT--ITEVRAVSM 107 (227)
T ss_dssp EEEECTTCEEECT-TCCCCEEEEEEESCEEEEEECTTSCEEEEEEECTTCEESCHHHHSCSCCSSEEEE--SSCEEEEEE
T ss_pred EEEeCCCCEEEcC-CCcCCEEEEEEeeEEEEEEECCCCcEEEEEEecCCCEEeeHHHcCCCCceeEEEE--cccEEEEEE
Confidence 4678888876332 2246789999999999998887775 345688999987321 222334444 344555543
Q ss_pred Ee-------CCCCceeeec---------------------------hhh-----------------hccCCCHHHHHHHh
Q 038563 151 FD-------SQNPGLQKIP---------------------------SAV-----------------FGSNIKEELLEKAF 179 (198)
Q Consensus 151 ~~-------s~~pg~~~~~---------------------------~~~-----------------f~~~~p~~vla~af 179 (198)
-. ..+|.+.... ..+ +.-.++.+-||..+
T Consensus 108 ~~~~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~lA~~l 187 (227)
T 3d0s_A 108 DRDALRSWIADRPEISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRFGTQEGGALRVTHDLTQEEIAQLV 187 (227)
T ss_dssp EHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHEEEETTEEEEECCCCHHHHHHHH
T ss_pred eHHHHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCcCCCceEEcCCCCHHHHHHHh
Confidence 21 1334322100 000 11147888999999
Q ss_pred CCCHHHHHHHhhhcC
Q 038563 180 GLTPKEIAKLRKRFA 194 (198)
Q Consensus 180 ~v~~~~v~~l~~~~~ 194 (198)
|++++.+.++.+.+.
T Consensus 188 g~sr~tvsR~l~~l~ 202 (227)
T 3d0s_A 188 GASRETVNKALADFA 202 (227)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH
Confidence 999999888877654
No 197
>2bgc_A PRFA; bacterial infection, human pathogen, transcriptional regulat transcription; HET: PR3; 2.3A {Listeria monocytogenes} SCOP: a.4.5.4 b.82.3.3 PDB: 2beo_A* 1omi_A
Probab=83.87 E-value=4.3 Score=31.55 Aligned_cols=71 Identities=10% Similarity=0.002 Sum_probs=45.5
Q ss_pred EEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEE-EEEEeCCcEEEECC---CC----eeEEEecCCCcEEEE
Q 038563 77 RADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIF-AKVIEKGEVMVFPR---GL----VHFQMNVGDTWATIL 148 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~-~~~l~~Gd~~~iP~---G~----~H~~~N~g~~~~~~~ 148 (198)
...+++|..+-. --.....+++|++|.+++...+.+|+.. ...+ +||++-... +. .+...... +++.++
T Consensus 20 ~~~~~~ge~i~~-~G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~-~G~~~Ge~~~~~~~~~~~~~~~~a~~-~~~~v~ 96 (238)
T 2bgc_A 20 PKQFHKKELIFN-QWDPQEYCIFLYDGITKLTSISENGTIMNLQYY-KGAFVIMSGFIDTETSVGYYNLEVIS-EQATAY 96 (238)
T ss_dssp CEEEETTCEEEC-TTCCCCEEEEEEESEEEEEEECTTSCEEEEEEE-ESSEEEESBCTTTCCBSCCCEEEECS-SEEEEE
T ss_pred EEEECCCCEEEe-CCCCCceEEEEEecEEEEEEECCCCCEEEEEEc-CCCEecchhhhcCCCcCcceeEEEEE-cceEEE
Confidence 457888887622 2224678999999999999888888643 3445 899885442 22 35555543 456555
Q ss_pred EE
Q 038563 149 GS 150 (198)
Q Consensus 149 ~~ 150 (198)
.+
T Consensus 97 ~i 98 (238)
T 2bgc_A 97 VI 98 (238)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 198
>3b02_A Transcriptional regulator, CRP family; structural genomics, riken structural genomics/proteomics in RSGI; 1.92A {Thermus thermophilus} PDB: 2zdb_A
Probab=83.86 E-value=3 Score=31.36 Aligned_cols=50 Identities=14% Similarity=0.028 Sum_probs=35.8
Q ss_pred EEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEE
Q 038563 79 DFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVF 129 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~i 129 (198)
.+++|..+-.- ...+..+++|++|.+.+...+++|+ .....+.+||++-.
T Consensus 3 ~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~Ge 53 (195)
T 3b02_A 3 RFARKETIYLR-GEEARTLYRLEEGLVRVVELLPDGRLITLRHVLPGDYFGE 53 (195)
T ss_dssp EECTTCEEECT-TSBCCCEEEEEESCEEEEEECTTSCEEEEEEECTTCEECG
T ss_pred EcCCCCEEECC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEecCCCEech
Confidence 46677755222 2235779999999999988887775 34578899998843
No 199
>2z69_A DNR protein; beta barrel, dimerization helix, transcription regulator; 2.10A {Pseudomonas aeruginosa}
Probab=83.68 E-value=1.2 Score=31.76 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=35.7
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.--. ....+++|++|.+++...+++|+ .....+.+||++
T Consensus 35 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 87 (154)
T 2z69_A 35 SDLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTF 87 (154)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEESCEEEECCCC-----CCEEECTTEEE
T ss_pred CcEEEecCCCEEecCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEccCCCee
Confidence 44567888887643323 46789999999999987766664 234688999987
No 200
>3kcc_A Catabolite gene activator; helix-turn-helix, CAMP, CAMP-binding, DNA-binding nucleotide-binding, transcription, transcription regulation; HET: CMP; 1.66A {Escherichia coli}
Probab=83.67 E-value=4.4 Score=32.15 Aligned_cols=117 Identities=9% Similarity=0.150 Sum_probs=72.2
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEECC----C--CeeEEEecCCCcEEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFPR----G--LVHFQMNVGDTWATIL 148 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP~----G--~~H~~~N~g~~~~~~~ 148 (198)
....+++|..+-.- -.....+++|++|.+++...+++|+ .....+.+||++-... . ....+.. .+++.++
T Consensus 70 ~~~~~~~ge~i~~~-G~~~~~~y~I~~G~v~~~~~~~~G~e~~~~~~~~G~~~Ge~~~~~~~~~~~~~~~A--~~~~~l~ 146 (260)
T 3kcc_A 70 HIHKYPSKSTLIHQ-GEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRA--KTACEVA 146 (260)
T ss_dssp EEEEECTTCEEECT-TCBCCEEEEEEECEEEEEEECTTCCEEEEEEEETTCEESCTTTTSTTCBCCSEEEE--SSCEEEE
T ss_pred EEEEECCCCEEECC-CCcCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehHHhCCCCCCceEEEE--CCCeEEE
Confidence 45678888876332 2236789999999999998887775 3467889999884322 1 2233444 3455555
Q ss_pred EEEe-------CCCCceeeec---------------------------hhhh-------c---------cCCCHHHHHHH
Q 038563 149 GSFD-------SQNPGLQKIP---------------------------SAVF-------G---------SNIKEELLEKA 178 (198)
Q Consensus 149 ~~~~-------s~~pg~~~~~---------------------------~~~f-------~---------~~~p~~vla~a 178 (198)
.+-. ..+|.+.... ..++ + -.++.+-||..
T Consensus 147 ~i~~~~~~~l~~~~p~l~~~l~~~l~~~l~~~~~~~~~l~~~~~~~Rla~~Ll~l~~~~~~~~~~~~~~l~lt~~~lA~~ 226 (260)
T 3kcc_A 147 EISYKKFRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLLVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQI 226 (260)
T ss_dssp EEEHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTSTTCEEETTEEEEECCHHHHHHH
T ss_pred EEcHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCCceeecCCHHHHHHH
Confidence 4321 1234332100 0000 0 03677889999
Q ss_pred hCCCHHHHHHHhhhcCC
Q 038563 179 FGLTPKEIAKLRKRFAP 195 (198)
Q Consensus 179 f~v~~~~v~~l~~~~~~ 195 (198)
+|++++.+.++.+.+..
T Consensus 227 lG~sr~tvsR~l~~L~~ 243 (260)
T 3kcc_A 227 VGCSRETVGRILKMLED 243 (260)
T ss_dssp HTCCHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHH
Confidence 99999999888776543
No 201
>1ft9_A Carbon monoxide oxidation system transcription regulator; heme sensor, catabolite gene activator protein; HET: HEM; 2.60A {Rhodospirillum rubrum} SCOP: a.4.5.4 b.82.3.1
Probab=83.04 E-value=11 Score=28.62 Aligned_cols=114 Identities=9% Similarity=0.038 Sum_probs=71.7
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeC
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDS 153 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s 153 (198)
+....+++|..+-.--. ....+++|++|.+.+. .+++|+ .....+.+||++- ....+..... +++.++.+=..
T Consensus 23 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~-~~~~G~~~~~~~~~~G~~fG--~~~~~~~~A~--~~~~v~~i~~~ 96 (222)
T 1ft9_A 23 FRSKIHAKGSLVCTGEG-DENGVFVVVDGRLRVY-LVGEEREISLFYLTSGDMFC--MHSGCLVEAT--ERTEVRFADIR 96 (222)
T ss_dssp CEEEEECTTCEEECTTC-CCCCEEEEEESEEEEE-EEETTEEEEEEEEETTCEEE--SCSSCEEEES--SCEEEEEECHH
T ss_pred CcEEEECCCCEEECCCC-CCCeEEEEEecEEEEE-ECCCCCEEEEEEcCCCCEec--CCCCEEEEEc--cceEEEEEeHH
Confidence 34567888887633222 3577999999999996 666675 3457889999987 3344455553 45555543211
Q ss_pred -------CCCceeeec---------------------------hhh-----------------hccCCCHHHHHHHhCCC
Q 038563 154 -------QNPGLQKIP---------------------------SAV-----------------FGSNIKEELLEKAFGLT 182 (198)
Q Consensus 154 -------~~pg~~~~~---------------------------~~~-----------------f~~~~p~~vla~af~v~ 182 (198)
.+|.+.... ..+ +.-.++.+-||..+|++
T Consensus 97 ~~~~l~~~~p~~~~~~~~~l~~~l~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~~t~~~lA~~lG~s 176 (222)
T 1ft9_A 97 TFEQKLQTCPSMAWGLIAILGRALTSCMRTIEDLMFHDIKQRIAGFFIDHANTTGRQTQGGVIVSVDFTVEEIANLIGSS 176 (222)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCBCCCSCC--CCCCEECCCHHHHHHHHCSC
T ss_pred HHHHHHHHChHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 234322110 001 11137889999999999
Q ss_pred HHHHHHHhhhcC
Q 038563 183 PKEIAKLRKRFA 194 (198)
Q Consensus 183 ~~~v~~l~~~~~ 194 (198)
.+.+.++.+.+.
T Consensus 177 r~tvsR~l~~L~ 188 (222)
T 1ft9_A 177 RQTTSTALNSLI 188 (222)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988877654
No 202
>3e97_A Transcriptional regulator, CRP/FNR family; YP_604437.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Deinococcus geothermalis dsm 11300}
Probab=82.96 E-value=3.1 Score=31.98 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=38.0
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
+....+++|..+-.--- ....+++|++|.+.+...+++|+ .....+.+||++-
T Consensus 29 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~G 82 (231)
T 3e97_A 29 VTERNFQPDELVVEQDA-EGEALHLVTTGVVRVSRVSLGGRERVLGDIYAPGVVG 82 (231)
T ss_dssp EEEEEECTTCBCCCTTC-TTTCEEEECSSEEEEEEECC--CEEEEEEEESSEEES
T ss_pred cEEEEECCCCEEEeCCC-CCCeEEEEEecEEEEEEECCCCceEEEEecCCCCEEe
Confidence 34567888886533322 36789999999999998877775 3457899999873
No 203
>1o5l_A Transcriptional regulator, CRP family; TM1171, structural GE JCSG, PSI, protein structure initiative, joint center for S genomics; 2.30A {Thermotoga maritima} SCOP: b.82.3.2
Probab=82.54 E-value=2.9 Score=31.93 Aligned_cols=52 Identities=13% Similarity=0.202 Sum_probs=38.7
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~ 127 (198)
+....+++|..+-..-. ....+++|++|.+++...+++|+ .....+.+||++
T Consensus 22 ~~~~~~~~g~~i~~~G~-~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~G~~~ 74 (213)
T 1o5l_A 22 GKVIVFRKGEIVKHQDD-PIEDVLILLEGTLKTEHVSENGKTLEIDEIKPVQII 74 (213)
T ss_dssp SEEEEECTTCEEECTTC-BCCEEEEEEESCEEEEEECTTSCEEEEEEECSSEES
T ss_pred cEEEEECCCCEEEcCCC-ccceEEEEEeeEEEEEEECCCCCEEEEEEecCCCEe
Confidence 34457888887633322 35789999999999988887775 345678999987
No 204
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=82.52 E-value=1.4 Score=38.40 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=29.2
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeCC
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDSQ 154 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s~ 154 (198)
.++..-++||.++||+|.+|.+.|..+.--+..-.++.+
T Consensus 292 ~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe 330 (392)
T 2ypd_A 292 TCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPE 330 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGG
T ss_pred eEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChh
Confidence 356788999999999999999999876544444444433
No 205
>3la7_A Global nitrogen regulator; activator, DNA-binding, transcription, transcription regulation; HET: BOG; 1.90A {Anabaena} PDB: 3la2_A* 3la3_A* 2xko_A* 2xgx_A* 2xhk_A* 2xkp_A*
Probab=82.22 E-value=4.2 Score=31.80 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=39.7
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
+....+++|..+-.- -.....+++|++|.+++...+++|+ .....+.+||++-
T Consensus 43 ~~~~~~~~ge~i~~~-G~~~~~ly~v~~G~v~~~~~~~~G~~~~l~~~~~g~~~G 96 (243)
T 3la7_A 43 PVVETFERNKTIFFP-GDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFG 96 (243)
T ss_dssp CEEEEECTTCEEECT-TSBCCEEEEEEESCEEEEEECTTCCEEEEEEECTTCEES
T ss_pred heeEEECCCCEEEcC-CCCCceEEEEEeCEEEEEEECCCCCEEEEEEecCCCEEc
Confidence 445688998876332 2235789999999999998888875 3457889999873
No 206
>2fmy_A COOA, carbon monoxide oxidation system transcription RE COOA-1; DNA transcription regulator, DNA binding protein; HET: HEM; 2.20A {Carboxydothermus hydrogenoformans} PDB: 2hkx_A*
Probab=81.41 E-value=14 Score=27.93 Aligned_cols=114 Identities=12% Similarity=0.170 Sum_probs=72.0
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEEEEEeC
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATILGSFDS 153 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~~~~~s 153 (198)
+....+++|..+-.- -.....+++|++|.+.+ ..+++|+ .....+.+||++-. ...+.... .+++.++.+-..
T Consensus 27 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~-~~~~~G~~~~~~~~~~G~~~G~--~~~~~~~A--~~~~~v~~i~~~ 100 (220)
T 2fmy_A 27 FREQRYSKKAILYTP-NTERNLVFLVKSGRVRV-YLAYEDKEFTLAILEAGDIFCT--HTRAFIQA--MEDTTILYTDIR 100 (220)
T ss_dssp SEEEEECTTCEEECT-TCSSCEEEEEEESEEEE-EEECSSCEEEEEEEETTCEEES--CSSSEEEE--SSSEEEEEEEHH
T ss_pred hheeEeCCCCEEECC-CCCCCeEEEEEecEEEE-EECCCCCEEEEEEcCCCCEeCC--ccceEEEE--cCcEEEEEEeHH
Confidence 345678888876332 22367899999999999 4666675 34578899999876 23344444 345555543211
Q ss_pred -------CCCceeeec----------------------------------hhh----------hccCCCHHHHHHHhCCC
Q 038563 154 -------QNPGLQKIP----------------------------------SAV----------FGSNIKEELLEKAFGLT 182 (198)
Q Consensus 154 -------~~pg~~~~~----------------------------------~~~----------f~~~~p~~vla~af~v~ 182 (198)
.+|.+.... ..- +.-.++.+-||..+|++
T Consensus 101 ~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Rl~~~L~~l~~~~g~~~~~~~~~~~~~t~~~lA~~lg~s 180 (220)
T 2fmy_A 101 NFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTT 180 (220)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCEEETTEEEEECSSCHHHHHHHHTSC
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCCCCcEEEeccCCHHHHHHHhCCc
Confidence 234322110 000 11157889999999999
Q ss_pred HHHHHHHhhhcC
Q 038563 183 PKEIAKLRKRFA 194 (198)
Q Consensus 183 ~~~v~~l~~~~~ 194 (198)
++.+.++.+.+.
T Consensus 181 r~tvsR~l~~l~ 192 (220)
T 2fmy_A 181 RQTVSVLLNDFK 192 (220)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998877654
No 207
>2zcw_A TTHA1359, transcriptional regulator, FNR/CRP family; stationary phase, DNA-binding, transcription regulation; 1.50A {Thermus thermophilus}
Probab=81.32 E-value=4.2 Score=30.62 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=69.4
Q ss_pred EEEEeCCcEecceeCCCC--CEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEE----CCCCeeEEEecCCCcEEEEE
Q 038563 77 RADFDVGGVNVPHFHPRA--TEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVF----PRGLVHFQMNVGDTWATILG 149 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a--~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~i----P~G~~H~~~N~g~~~~~~~~ 149 (198)
...+++|..+-..-. .. ..+++|++|.+.+...+++|+ .....+.+||++-. .....+.... -+++.++.
T Consensus 7 ~~~~~~g~~i~~~g~-~~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~~~l~~~~~~~~~~A--~~~~~v~~ 83 (202)
T 2zcw_A 7 TVSFKAGDVILYPGV-PGPRDRAYRVLEGLVRLEAVDEEGNALTLRLVRPGGFFGEEALFGQERIYFAEA--ATDVRLEP 83 (202)
T ss_dssp CEEECTTCEEECSBS-CCTTCCCEEEEESCEEEEEECTTSCEEEEEEECTTCEECTHHHHTCCBCSEEEE--SSCEEEEE
T ss_pred EEEECCCCEEECCCC-CCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCCEeeehhcCCCCcceEEEE--cccEEEEE
Confidence 346788876533222 34 668999999999988887775 34578899998743 1222334444 34566665
Q ss_pred EEeCCC-Cceee-e----c----------------------hhh----------------hccCCCHHHHHHHhCCCHHH
Q 038563 150 SFDSQN-PGLQK-I----P----------------------SAV----------------FGSNIKEELLEKAFGLTPKE 185 (198)
Q Consensus 150 ~~~s~~-pg~~~-~----~----------------------~~~----------------f~~~~p~~vla~af~v~~~~ 185 (198)
+ ...- |.+.. + + ..+ +.-.++.+-||..+|++.+.
T Consensus 84 i-~~~~~p~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~~~~~t~~~lA~~lg~sr~t 162 (202)
T 2zcw_A 84 L-PENPDPELLKDLAQHLSQGLAEAYRRIERLATQRLKNRMAAALLELSETPLAHEEEGKVVLKATHDELAAAVGSVRET 162 (202)
T ss_dssp C-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTTSTTEEEETTEEEEECCHHHHHHHHTCCHHH
T ss_pred E-hHhcCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcCCCCCCcEEccCCCHHHHHHHhCCCHHH
Confidence 5 3211 21110 0 0 001 11136788899999999999
Q ss_pred HHHHhhhcC
Q 038563 186 IAKLRKRFA 194 (198)
Q Consensus 186 v~~l~~~~~ 194 (198)
+.++.+.+.
T Consensus 163 vsR~l~~L~ 171 (202)
T 2zcw_A 163 VTKVIGELA 171 (202)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877654
No 208
>3e6c_C CPRK, cyclic nucleotide-binding protein; CPRK, halorespiration; HET: DNA 3C4; 1.80A {Desulfitobacterium hafniense} SCOP: a.4.5.4 b.82.3.2 PDB: 3e6b_A* 3e5u_C* 3e6d_A 3e5x_A* 3e5q_A 2h6b_A* 2h6c_A
Probab=81.07 E-value=4.6 Score=31.57 Aligned_cols=118 Identities=9% Similarity=0.050 Sum_probs=71.7
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeE-EEEEEeCCcEEEE--CCCCeeEEEecCCCcEEEEEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRI-FAKVIEKGEVMVF--PRGLVHFQMNVGDTWATILGSF 151 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~-~~~~l~~Gd~~~i--P~G~~H~~~N~g~~~~~~~~~~ 151 (198)
+....+++|..+-.--- ....+++|++|.+++...+++|+. ....+.+||++-. .....+.... .+++.++.+-
T Consensus 32 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~G~~~G~~l~~~~~~~~~A--~~~~~v~~i~ 108 (250)
T 3e6c_C 32 GLIRDFAKGSAVIMPGE-EITSMIFLVEGKIKLDIIFEDGSEKLLYYAGGNSLIGKLYPTGNNIYATA--MEPTRTCWFS 108 (250)
T ss_dssp SEEEEECTTCEEECTTC-CCCSEEEEEESCEEEEEECTTSCEEEEEEECTTCEECCCSCCSCCEEEEE--SSSEEEEEEC
T ss_pred CeEEEECCCCEEECCCC-CCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCEEeeecCCCCceEEEE--cccEEEEEEc
Confidence 34557888887633222 357799999999999988888753 4567899998843 2222333333 3445554431
Q ss_pred e-------CCCCceeeec---------------------------hhh-----------------hccCCCHHHHHHHhC
Q 038563 152 D-------SQNPGLQKIP---------------------------SAV-----------------FGSNIKEELLEKAFG 180 (198)
Q Consensus 152 ~-------s~~pg~~~~~---------------------------~~~-----------------f~~~~p~~vla~af~ 180 (198)
. ..+|.+.... ..+ +.-.++.+-||..+|
T Consensus 109 ~~~~~~l~~~~p~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~Rl~~~L~~l~~~~~~~~~~~~~i~~~~t~~~iA~~lG 188 (250)
T 3e6c_C 109 EKSLRTVFRTDEDMIFEIFKNYLTKVAYYARQVAEMNTYNPTIRILRLFYELCSSQGKRVGDTYEITMPLSQKSIGEITG 188 (250)
T ss_dssp HHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCEEETTEEEEECCCCHHHHHHHHT
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCCCCCCcEecCCCCHHHHHHHhC
Confidence 1 1234321100 001 111468888999999
Q ss_pred CCHHHHHHHhhhcCC
Q 038563 181 LTPKEIAKLRKRFAP 195 (198)
Q Consensus 181 v~~~~v~~l~~~~~~ 195 (198)
++++.+.++.+.+..
T Consensus 189 ~sr~tvsR~l~~L~~ 203 (250)
T 3e6c_C 189 VHHVTVSRVLASLKR 203 (250)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 999999888776543
No 209
>1xsq_A Ureidoglycolate hydrolase; northeast structural genomics consortium, NESG, structural genomics, protein structure initiative, PSI, ET81, X-RAY; 1.60A {Escherichia coli} SCOP: b.82.1.14 PDB: 1xsr_A 1yqc_A
Probab=80.86 E-value=6.6 Score=30.16 Aligned_cols=79 Identities=15% Similarity=0.154 Sum_probs=54.6
Q ss_pred ceEEEEEEEe--CCcEecceeCCCCCEEEEEEecEEEEEEEeCCC------eEEEEEEeCCcEEEECCCCeeEEEecCCC
Q 038563 72 GMSMVRADFD--VGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN------RIFAKVIEKGEVMVFPRGLVHFQMNVGDT 143 (198)
Q Consensus 72 gls~~~~~l~--pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~------~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~ 143 (198)
++++.|..-. |-.+..+=.||..+|.+.-+.|...+-++-+++ +...+.+..|+.+.+-+|.+|.-.-.-.+
T Consensus 53 ~i~ifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVA~~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~ 132 (168)
T 1xsq_A 53 LISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQR 132 (168)
T ss_dssp EEEEEEECBCCSSCEEEEEEECTTBCEEEEESBCCCCEEEEEECSSSCEEEEEEEEECCSSCEEEECTTCEECCCCBSSS
T ss_pred EEEEEEecCCCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCChhheEEEEecCCeEEEeCCCceecccccCCC
Confidence 4666654433 334555677888999999999986654544332 45678899999999999999996544345
Q ss_pred cEEEEEE
Q 038563 144 WATILGS 150 (198)
Q Consensus 144 ~~~~~~~ 150 (198)
+..++++
T Consensus 133 ~~~F~vv 139 (168)
T 1xsq_A 133 VTDFLTI 139 (168)
T ss_dssp CEEEEEE
T ss_pred cceEEEE
Confidence 6666644
No 210
>2gau_A Transcriptional regulator, CRP/FNR family; structural genomics, porphyromona gingivalis, PSI, protein structure initiative; 1.90A {Porphyromonas gingivalis} SCOP: a.4.5.4 b.82.3.2
Probab=80.86 E-value=2.8 Score=32.27 Aligned_cols=52 Identities=12% Similarity=0.130 Sum_probs=34.8
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.- ......+++|++|.+.+...+++|+ .....+.+||++
T Consensus 33 ~~~~~~~~g~~i~~~-g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~G~~~ 85 (232)
T 2gau_A 33 IQPFPCKKASTVFSE-GDIPNNLFYLYEGKIKILREGVYGRFHISRIVKPGQFF 85 (232)
T ss_dssp CEEEEECTTCEEECT-TCCCCEEEEEEESCEEEEC-----CCCEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeC-CCCCCeEEEEEeCEEEEEEECCCCCEEEEEEeCCCCEe
Confidence 445688888876332 2236779999999999987776664 345789999987
No 211
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=80.65 E-value=3.8 Score=30.86 Aligned_cols=50 Identities=8% Similarity=0.092 Sum_probs=36.6
Q ss_pred EEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 74 SMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 74 s~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
.+....+.||..+-.- ...+..+++|++|++.+.. ++|+ ....+.+||++
T Consensus 93 ~~~~~~~~~ge~I~~~-G~~~~~ly~I~~G~v~~~~--~~g~-~~~~l~~G~~f 142 (198)
T 2ptm_A 93 LLEFEVFQPADYVIQE-GTFGDRMFFIQQGIVDIIM--SDGV-IATSLSDGSYF 142 (198)
T ss_dssp HCEEEEECTTCEEECT-TSCCSEEEEEEECCEEEEC--TTSC-EEEEECTTCEE
T ss_pred hccceeeCCCCEEEEC-CCcCcEEEEEEeCEEEEEe--cCCe-EEEEecCCCEe
Confidence 3456788998876332 2246789999999999764 5676 45789999987
No 212
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=80.26 E-value=4 Score=33.43 Aligned_cols=52 Identities=12% Similarity=0.088 Sum_probs=39.2
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.- -.....+++|++|.+++...+.+|+.....+.+||++
T Consensus 36 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~~~~~g~~~~~~~~~G~~f 87 (333)
T 4ava_A 36 VQPLRAAAGQVLLRQ-GEPAVSFLLISSGSAEVSHVGDDGVAIIARALPGMIV 87 (333)
T ss_dssp CEEEEECTTCEEECT-TSBCCCEEEEEECCEEEEEECTTCCEEEEEECTTCEE
T ss_pred CeEEEECCCCEEEeC-CCcCCEEEEEEeeEEEEEEECCCCcEEEEEecCCCEe
Confidence 345678888865222 2235779999999999998888787667889999987
No 213
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=78.84 E-value=8.2 Score=30.68 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=38.5
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC--eEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN--RIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~--~~~~~~l~~Gd~~ 127 (198)
+....+.+|..+-..-. .+..+++|++|++.+.....+| +.....+.+||++
T Consensus 180 ~~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~~~~~~~~~~l~~G~~f 233 (291)
T 2qcs_B 180 LEPVQFEDGQKIVVQGE-PGDEFFIILEGSAAVLQRRSENEEFVEVGRLGPSDYF 233 (291)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEEEEEEEEEECSTTSCEEEEEEECTTCEE
T ss_pred cEEEEECCCCEEEeCCc-cCCEEEEEEeCEEEEEEecCCCCccEEEEEeCCCCEe
Confidence 45668888887644333 4678999999999998765555 2456789999988
No 214
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=78.84 E-value=1.4 Score=36.91 Aligned_cols=46 Identities=20% Similarity=0.298 Sum_probs=34.8
Q ss_pred CCEEEEEEe-cEEEEEEEeCC-----------Ce------EEEEEEeCCcEEEECCCCeeEEEe
Q 038563 94 ATEIAVVLE-GKIYSGFVDTQ-----------NR------IFAKVIEKGEVMVFPRGLVHFQMN 139 (198)
Q Consensus 94 a~Ei~yVl~-G~~~~~~~~~~-----------~~------~~~~~l~~Gd~~~iP~G~~H~~~N 139 (198)
-.|+.|+++ .++..||-... ++ +....|++||.+++|+|.+|..-.
T Consensus 117 KpE~~y~L~~~~~~~Gf~~~~~~~~~~~~l~~~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~~ 180 (300)
T 1zx5_A 117 VESAWLVFNKGKAYAGFKEDVKIEELEEKLKEEDFDFKTLLNTFETTPYDTFVIRPGIPHAGEG 180 (300)
T ss_dssp CCEEEEECSSCEEEEEESSCCCHHHHHHHHTSSSCCGGGGEEEEECCTTCEEEECTTCCEEEES
T ss_pred CcEEEEEcccHHHhhCCCCCCCHHHHHHHHHhCchhHHHHhceeECCCCCEEEcCCCCceEcCC
Confidence 479999998 56777764321 22 446789999999999999998753
No 215
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=78.81 E-value=4.6 Score=30.57 Aligned_cols=48 Identities=10% Similarity=0.099 Sum_probs=34.8
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+.||..+-..-. .+..+++|++|++.+. ..+|+. ..+.+||++
T Consensus 95 ~~~~~~~~ge~I~~~g~-~~~~ly~I~~G~v~v~--~~~g~~--~~l~~G~~f 142 (202)
T 3bpz_A 95 LKFEVFQPGDYIIREGT-IGKKMYFIQHGVVSVL--TKGNKE--MKLSDGSYF 142 (202)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECEEEEE--CTTSCC--EEEETTCEE
T ss_pred CCceEECCCCEEEECCC-cCCeEEEEeccEEEEE--ECCCeE--EEEcCCCEe
Confidence 44568899887643323 3678999999999874 455663 478999987
No 216
>1xe7_A YML079WP, hypothetical 22.5 kDa protein in TUB1-CPR3 intergenic region; jelly roll motif, cupin superfamily, structural genomics; HET: GUN; 1.75A {Saccharomyces cerevisiae} SCOP: b.82.1.16 PDB: 1xe8_A*
Probab=77.90 E-value=24 Score=27.90 Aligned_cols=132 Identities=16% Similarity=0.150 Sum_probs=77.6
Q ss_pred CCCeEEEEEcccCC----CC--c--------ccc-ceEEEEEEEeCCc-EecceeCCCCCEEEEEEecEEEEEEEeCCCe
Q 038563 52 ETGLASIPVNVNVF----PG--L--------NTL-GMSMVRADFDVGG-VNVPHFHPRATEIAVVLEGKIYSGFVDTQNR 115 (198)
Q Consensus 52 ~~g~~v~~~~~~~~----P~--l--------~~~-gls~~~~~l~pg~-~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~ 115 (198)
|.||..+....... +. + ... -.+....-|.++. ...+|.- ++.|+.+-..|.....++.++|+
T Consensus 43 PEGG~yrET~Rs~~~~~~~~~~~~~~~~~~~~~R~~~TaIYfLL~~~~~~S~wHRv-~sdEiW~~h~G~p~~~li~~dg~ 121 (203)
T 1xe7_A 43 REGGYFKETDRSPYTMEVEKPVNGGSGNTEMVTRNQSTLIYYLLTPDSPIGKFHKN-INRIIHILQRGKGQYVLVYPDGQ 121 (203)
T ss_dssp TTSSEEEEEEECSCEEEECCCC--------CEEEESCEEEEEEEBTTBCEEEEEEE-SSCEEEEEEEECEEEEEECTTSC
T ss_pred CCCceEEEEEecccccccCccccccccccCCCCccceeEEEEEEcCCCCcccceee-CCCEEEEEEcCCccEEEEcCCCC
Confidence 78888887664321 11 0 011 2345555677776 5655554 69999999999665567788887
Q ss_pred EEEEEEeC----Cc--EEEECCCCeeEEEec-CCCcE--EEEEEEeCCCCceeeechhhhccCCCHH-HHHHHhCCCHHH
Q 038563 116 IFAKVIEK----GE--VMVFPRGLVHFQMNV-GDTWA--TILGSFDSQNPGLQKIPSAVFGSNIKEE-LLEKAFGLTPKE 185 (198)
Q Consensus 116 ~~~~~l~~----Gd--~~~iP~G~~H~~~N~-g~~~~--~~~~~~~s~~pg~~~~~~~~f~~~~p~~-vla~af~v~~~~ 185 (198)
..+.+|.+ |+ -++||+|........ +.+-. .++... -.||+..-. |. ..+.+ -|.+.|. .+.
T Consensus 122 ~~~~~LG~dl~~Ge~pQ~vVPaG~WqaA~~~~~~~~~~~tLVgCt--VaPGFdF~d---Fe-l~~~~~~L~~~~P--~~~ 193 (203)
T 1xe7_A 122 VKSFKVGFDYKNGEVSQWVVPGGVFKASFLLPNEEFDNGFLISEV--VVPGFDFED---HT-FLKGEDELKHLVG--PEK 193 (203)
T ss_dssp EEEEEESSCGGGTCBSEEEECTTCEEEEEECCCTTTTTCEEEEEE--ESSCCCGGG---EE-ECCHHHHHHHHHC--HHH
T ss_pred EEEEEeCCCcccCcccEEEEcCCEEEEeEecCCCCcccceEEEEE--ecCCccchh---cE-ecCCcHHHHHHCC--HHH
Confidence 65566653 55 589999998887654 22221 233222 247775532 22 23555 4444454 666
Q ss_pred HHHHhhh
Q 038563 186 IAKLRKR 192 (198)
Q Consensus 186 v~~l~~~ 192 (198)
++.|+-.
T Consensus 194 ~~~l~~l 200 (203)
T 1xe7_A 194 AAELAFL 200 (203)
T ss_dssp HHHTGGG
T ss_pred HHHHHHH
Confidence 7766543
No 217
>2bdr_A Ureidoglycolate hydrolase; all beta protein, structural genomics, PSI, protein structur initiative, northeast structural genomics consortium; 1.60A {Pseudomonas putida} SCOP: b.82.1.14
Probab=77.41 E-value=9 Score=29.60 Aligned_cols=80 Identities=19% Similarity=0.115 Sum_probs=54.4
Q ss_pred ceEEEEEEEe--CCcEecceeCCCCCEEEEEEecEEEEEEEeCCC------eEEEEEEeCCcEEEECCCCeeEEEecCCC
Q 038563 72 GMSMVRADFD--VGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN------RIFAKVIEKGEVMVFPRGLVHFQMNVGDT 143 (198)
Q Consensus 72 gls~~~~~l~--pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~------~~~~~~l~~Gd~~~iP~G~~H~~~N~g~~ 143 (198)
++++.|..-. |=.+..+=.||..+|.+.-+.|...+-++-+++ +...+....|+.+.+-+|.+|.-.-.-++
T Consensus 55 ~isifr~~~r~~p~~v~~lERHp~~sQafiPl~~~~~lVvVAp~~~~Pd~~~lrAF~~~ggqgV~y~~GtWH~pl~~l~~ 134 (175)
T 2bdr_A 55 IISIFRADAQDMPLTVRMLERHPLGSQAFIPLLGNPFLIVVAPVGDAPVSGLVRAFRSNGRQGVNYHRGVWHHPVLTIEK 134 (175)
T ss_dssp EEEEEEEECCCSSEEECEEEECTTBCEEEEESSCCCEEEEEECSSSSCCGGGCEEEEECSSCEEEECTTCEECSCEESSS
T ss_pred EEEEEEccccCCCceeeEEeeCCCCceEEEECCCCEEEEEEeCCCCCCCccceEEEEeCCCeEEEeCCCceecccccCCC
Confidence 4666655333 223445667888999999999986555554432 45578999999999999999975433344
Q ss_pred cEEEEEEE
Q 038563 144 WATILGSF 151 (198)
Q Consensus 144 ~~~~~~~~ 151 (198)
+..++++-
T Consensus 135 ~~dF~vvd 142 (175)
T 2bdr_A 135 RDDFLVVD 142 (175)
T ss_dssp EEEEEEEE
T ss_pred CceEEEEE
Confidence 55555443
No 218
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=77.15 E-value=1.7 Score=36.72 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=31.9
Q ss_pred CCCEEEEEEec----EEEEEEEeCC----------C----eEEEEEEeCCcEEEECCCCeeEEE
Q 038563 93 RATEIAVVLEG----KIYSGFVDTQ----------N----RIFAKVIEKGEVMVFPRGLVHFQM 138 (198)
Q Consensus 93 ~a~Ei~yVl~G----~~~~~~~~~~----------~----~~~~~~l~~Gd~~~iP~G~~H~~~ 138 (198)
.-.|++|+++. ++.++.-..+ + -+....|++||.+++|+|.+|...
T Consensus 116 gKpE~~y~L~~~~~~~~~~G~~~~~~e~l~~~i~~~~~~~lLn~v~l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 116 GKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDWEGLLRRIKIKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCCEEEEEEEECTTCEEEEEECCSSHHHHHHHHHTTCHHHHEEEEECCTTCEEEECTTCCEEEC
T ss_pred CCCEEEEEccCCCchhheeCCCCCCHHHHHHHHHcCCHHHhceEEEcCCCCEEEcCCCCceEec
Confidence 36899999985 3444421110 0 013578999999999999999864
No 219
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=74.45 E-value=9.4 Score=31.93 Aligned_cols=66 Identities=11% Similarity=0.102 Sum_probs=40.6
Q ss_pred EEeCCcEecceeCCCCCEEEE-EEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecC--CCcEEEEE
Q 038563 79 DFDVGGVNVPHFHPRATEIAV-VLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVG--DTWATILG 149 (198)
Q Consensus 79 ~l~pg~~~~pH~Hp~a~Ei~y-Vl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g--~~~~~~~~ 149 (198)
+|+.+....-.+--...|+.+ .+.|++.+.+ +|+ .+.|..-|.+++|+|.--...... ..++.+..
T Consensus 63 ~L~~~~~~~~~~fl~~rE~~iV~lgG~~~V~v---dg~--~f~lg~~dalYVp~G~~~v~~as~d~~~~a~fav 131 (289)
T 1ywk_A 63 EIILDKELGVDYFLERRELGVINIGGPGFIEI---DGA--KETMKKQDGYYIGKETKHVRFSSENPDNPAKFYI 131 (289)
T ss_dssp ECCCSGGGTSSSTTTTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred EcCCCceecccccCCCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 455444333332234566665 5778998876 466 348999999999999765444432 34555543
No 220
>2d93_A RAP guanine nucleotide exchange factor 6; CNMP_binding domain, PDZ domain containing guanine nucleotide exchange factor 2, PDZ-GEF2, RA-GEF-2; NMR {Homo sapiens}
Probab=72.70 E-value=4.8 Score=28.07 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=33.3
Q ss_pred EEEEEEe-CCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFD-VGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~-pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+. +|..+-. -...+..+++|++|.+++. ..+|+. ..+.+||++
T Consensus 39 ~~~~~~~~~g~~i~~-~g~~~~~~y~i~~G~v~~~--~~~g~~--~~l~~G~~f 87 (134)
T 2d93_A 39 MIFEVVEQAGAIILE-DGQELDSWYVILNGTVEIS--HPDGKV--ENLFMGNSF 87 (134)
T ss_dssp EEEEEECSSSCEEEC-TTCEECEEEECCBSCEEEE--CSSSCE--EEECTTCEE
T ss_pred heEEEecCCCCEEEe-CCCCCCeEEEEEeCEEEEE--cCCCcE--EEecCCCcc
Confidence 3456778 7776522 2223567999999999976 356764 578999977
No 221
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=72.53 E-value=12 Score=26.65 Aligned_cols=48 Identities=17% Similarity=0.244 Sum_probs=34.9
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.- ......+++|++|.+.+.. +|+. ...+.+||++
T Consensus 61 ~~~~~~~~g~~i~~~-G~~~~~~y~i~~G~v~~~~---~~~~-~~~~~~G~~f 108 (154)
T 3pna_A 61 MFPVSFIAGETVIQQ-GDEGDNFYVIDQGEMDVYV---NNEW-ATSVGEGGSF 108 (154)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEESCEEEEE---TTEE-EEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCCCCeEEEEEecEEEEEE---CCEE-EEEecCCCEe
Confidence 445688888876332 3346889999999999875 4554 3579999986
No 222
>4f8a_A Potassium voltage-gated channel subfamily H membe; probable regulatory domain of potassium channel, membrane PR transport protein; 2.20A {Mus musculus}
Probab=72.41 E-value=13 Score=26.25 Aligned_cols=49 Identities=12% Similarity=0.154 Sum_probs=34.2
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVF 129 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~i 129 (198)
....+++|..+-.- ......+++|++|.+++.. .+. ....+.+||++-.
T Consensus 51 ~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~~~-~~~~~~~G~~fG~ 99 (160)
T 4f8a_A 51 QTVHCAPGDLIYHA-GESVDSLCFVVSGSLEVIQ---DDE-VVAILGKGDVFGD 99 (160)
T ss_dssp EEEEECTTCEEECT-TSBCCEEEEEEESEEEEEE---TTE-EEEEEETTCEEEC
T ss_pred eeeeeCCCCEEEeC-CCCccEEEEEEeeEEEEEE---CCE-EEEEecCCCEeCc
Confidence 34678888865322 2246889999999999865 233 3568999998743
No 223
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=71.42 E-value=3.3 Score=36.09 Aligned_cols=24 Identities=17% Similarity=0.188 Sum_probs=20.5
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEe
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMN 139 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N 139 (198)
+....|++||.+++|+|.+|....
T Consensus 239 Ln~v~l~pGd~~fipAG~~HAy~~ 262 (394)
T 2wfp_A 239 LNVVKLNPGEAMFLFAETPHAYLQ 262 (394)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEE
T ss_pred heEEECCCCCEEEcCCCCceEcCC
Confidence 346789999999999999998753
No 224
>3ocp_A PRKG1 protein; serine/threonine kinase, TF2I and IRAG, transferase; HET: CMP; 2.49A {Homo sapiens} PDB: 3od0_A* 3ogj_A*
Probab=71.06 E-value=11 Score=26.21 Aligned_cols=48 Identities=13% Similarity=0.160 Sum_probs=34.0
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.- ......+++|++|.+++.- +|+. ...+.+||++
T Consensus 46 ~~~~~~~~g~~i~~~-g~~~~~~y~i~~G~v~~~~---~g~~-~~~~~~G~~f 93 (139)
T 3ocp_A 46 MYPVEYGKDSCIIKE-GDVGSLVYVMEDGKVEVTK---EGVK-LCTMGPGKVF 93 (139)
T ss_dssp CEEEEECSSCEEECT-TSCCCEEEEEEECCEEEEE---TTEE-EEEECTTCEE
T ss_pred cEEEecCCCCEEEeC-CCcCCEEEEEEeCEEEEEE---CCEE-EEEeCCCCEe
Confidence 345678888865332 2346889999999999843 4553 4688999986
No 225
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=69.68 E-value=9.3 Score=32.83 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=39.9
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe---EEEEEEeCCcEEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR---IFAKVIEKGEVMVF 129 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~---~~~~~l~~Gd~~~i 129 (198)
+....+++|..+-. -...+..+++|++|.+.+...+.+|+ .....+.+||++-.
T Consensus 65 ~~~~~~~~g~~i~~-~Gd~~~~~y~i~~G~v~v~~~~~~g~~~~~~~~~~~~G~~fGe 121 (469)
T 1o7f_A 65 GYYENLEKGITLFR-QGDIGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFGE 121 (469)
T ss_dssp CEEEEECTTCEEEC-TTSBCCEEEEEEESCEEEEECSSSCGGGCEEEEEECTTCEECG
T ss_pred ceEEEECCCCEEEe-CCCCCCcEEEEEeeEEEEEEecCCCCCcceEEEEccCCCCcch
Confidence 44568888886532 23346789999999999988777763 45678999998844
No 226
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=68.59 E-value=19 Score=30.93 Aligned_cols=52 Identities=8% Similarity=-0.044 Sum_probs=37.9
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMV 128 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~ 128 (198)
+....+++|..+-..-. .+..+++|++|++.+.. +.+|+ .....+.+||++-
T Consensus 168 ~~~~~~~~Ge~I~~qGd-~~d~~YiI~sG~v~v~~-~~~G~~~~v~~l~~G~~fG 220 (416)
T 3tnp_B 168 MFEKLVKEGEHVIDQGD-DGDNFYVIDRGTFDIYV-KCDGVGRCVGNYDNRGSFG 220 (416)
T ss_dssp CEEEEECTTCEEECTTS-CCCEEEEEEECEEEEEE-ECSSCEEEEEEEESCCEEC
T ss_pred cEEEEeCCCCEEEeCCC-CCceEEEEEeeEEEEEE-ecCCCEEEEEEecCCCEEe
Confidence 45678888887644333 46889999999999887 55553 4456899999773
No 227
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=64.81 E-value=10 Score=32.30 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=27.0
Q ss_pred EEEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 116 IFAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 116 ~~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
++..+=++||++++++|..|+.+|.|-.-.+.+
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 346777999999999999999999997555444
No 228
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=64.41 E-value=16 Score=29.15 Aligned_cols=52 Identities=15% Similarity=0.365 Sum_probs=37.1
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEe-CCCe-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVD-TQNR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~-~~~~-~~~~~l~~Gd~~ 127 (198)
+....+.+|..+-.- -..+..+++|++|++.+...+ .+|+ .....+.+||++
T Consensus 180 ~~~~~~~~g~~I~~~-G~~~~~~yiI~~G~v~~~~~~~~~g~~~~~~~l~~G~~f 233 (299)
T 3shr_A 180 LEETHYENGEYIIRQ-GARGDTFFIISKGKVNVTREDSPNEDPVFLRTLGKGDWF 233 (299)
T ss_dssp CEEEEECTTCEEECT-TCEECEEEEEEESEEEEEECCSSSCCCEEEEEEETTCEE
T ss_pred ccEEEECCCCEEEeC-CCCCCEEEEEEeeEEEEEEecCCCCcceEEEEcCCCCEe
Confidence 345678888865322 224577999999999998776 3453 445789999987
No 229
>3dkw_A DNR protein; CRP-FNR, HTH, beta barrel, dimerization helix, homodimer, transcription regulator; 3.60A {Pseudomonas aeruginosa}
Probab=64.20 E-value=2.6 Score=32.21 Aligned_cols=53 Identities=9% Similarity=0.053 Sum_probs=37.7
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe-EEEEEEeCCcEEEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR-IFAKVIEKGEVMVF 129 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~-~~~~~l~~Gd~~~i 129 (198)
....+++|..+-..-. ....+++|++|.+.+...+++|+ .....+.+||++-.
T Consensus 33 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~~~~G~~~~~~~~~~g~~~G~ 86 (227)
T 3dkw_A 33 DLVNLDKGAYVFRQGE-PAHAFYYLISGCVKIYRLTPEGQEKILEVTNERNTFAE 86 (227)
T ss_dssp EEEECCTTEEEECTTS-BCCEEEEEEESCEECCBCCGGGCCBCCCEECTTEEESC
T ss_pred EEEEECCCCEEEcCCC-ccceEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEeee
Confidence 4557888886533322 36789999999999887777664 23467889998743
No 230
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=62.47 E-value=45 Score=26.12 Aligned_cols=88 Identities=11% Similarity=0.004 Sum_probs=46.5
Q ss_pred ccCceEEeccccCCCcCCCCeEEEEEcccCCCCccccceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCC
Q 038563 35 TVEDFVFSGIKFRGKFSETGLASIPVNVNVFPGLNTLGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQN 114 (198)
Q Consensus 35 ~~~df~~~~~~~~~~~~~~g~~v~~~~~~~~P~l~~~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~ 114 (198)
.-+.|.|+|....--. -.+|.++-.|.-.-++.- ...+.++.+. +... .+.+ ...-++|+++|++.+... ++
T Consensus 87 ~~~p~~F~G~~~v~a~-L~~G~~~DfNlM~rr~~~--~~~v~~~~~~-~~~~-~~~~-~~~~~v~~l~G~~~v~~~--~~ 158 (200)
T 1yll_A 87 ARQAFAFSGDSEVHCT-LLDGAIRDFNLIYAPRRH--RARLQWLRVE-GELD-WHGT-ASTLLLFAQQDGVAISLQ--GQ 158 (200)
T ss_dssp BTCCEEEETTSCEEEE-ESSSCEEEEEEEECTTTE--EEEEEEEEEE-EEEE-EEEC-CSEEEEEESSSCEEEEET--TE
T ss_pred CCCcEEeCCCCcEEEE-ECCCCEEEEEEEEcCCcc--EEEEEEEecC-CCee-EcCC-CCEEEEEEccCcEEEEcC--CC
Confidence 3456778764322110 333445555544444322 1233333332 2211 1222 246789999999987641 12
Q ss_pred eEEEEEEeCCcEEEECCC
Q 038563 115 RIFAKVIEKGEVMVFPRG 132 (198)
Q Consensus 115 ~~~~~~l~~Gd~~~iP~G 132 (198)
+ ...|.+||++++-..
T Consensus 159 ~--~~~L~~~d~l~~~~~ 174 (200)
T 1yll_A 159 P--RGQLAAHDCLCAEGL 174 (200)
T ss_dssp E--EEEECTTCEEEEESC
T ss_pred c--eeecCCCCEEEEeCC
Confidence 3 578999999998654
No 231
>3g7d_A PHPD; non heme Fe(II) dioxygenase, cupin, biosynthetic protein; 1.80A {Streptomyces viridochromogenes} PDB: 3gbf_A 3rzz_A
Probab=61.90 E-value=32 Score=29.56 Aligned_cols=40 Identities=15% Similarity=0.004 Sum_probs=35.8
Q ss_pred EEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEE
Q 038563 98 AVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQM 138 (198)
Q Consensus 98 ~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~ 138 (198)
+.|.+|++++.+..++|. ....|.++|..++-+-+.|.+.
T Consensus 358 Y~v~~G~lTL~W~~~dGt-~~a~L~PDgSAwv~PFV~H~w~ 397 (443)
T 3g7d_A 358 YVVTEGRLTLEWDGPDGP-ASVELEPDGSAWTGPFVRHRWH 397 (443)
T ss_dssp EEEEESCEEEEEEETTEE-EEEEECTTCEEEECTTCCEEEE
T ss_pred EEEecCceEEEecCCCCc-cceEECCCCceeeccccccccc
Confidence 457899999999878776 6899999999999999999998
No 232
>1vp6_A CNBD, cyclic-nucleotide binding domain of mesorhizobium LOTI CNG potassium channel; dimer helical bundle beta barrel core with cyclic AMP bound; HET: CMP; 1.70A {Mesorhizobium loti} SCOP: b.82.3.2 PDB: 3cl1_A* 2k0g_A* 2kxl_A 3clp_A* 1u12_A 3co2_A
Probab=60.62 E-value=9 Score=26.51 Aligned_cols=45 Identities=16% Similarity=0.132 Sum_probs=31.9
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
....+++|..+-.--. ....+++|++|.+++... ++ ..+.+||++
T Consensus 35 ~~~~~~~g~~i~~~g~-~~~~~y~i~~G~v~~~~~---~~---~~~~~G~~~ 79 (138)
T 1vp6_A 35 RARTVPAGAVICRIGE-PGDRMFFVVEGSVSVATP---NP---VELGPGAFF 79 (138)
T ss_dssp EEEEECTTCEEECTTS-CCCEEEEEEESCEEECSS---SC---EEECTTCEE
T ss_pred cEEEeCCCCEEEeCCC-CcceEEEEEeeEEEEEeC---Cc---ceECCCCEe
Confidence 4568888887643323 467899999999997643 22 478899876
No 233
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=60.61 E-value=7 Score=34.52 Aligned_cols=22 Identities=23% Similarity=0.237 Sum_probs=19.6
Q ss_pred EEEEeCCcEEEECCCCeeEEEe
Q 038563 118 AKVIEKGEVMVFPRGLVHFQMN 139 (198)
Q Consensus 118 ~~~l~~Gd~~~iP~G~~H~~~N 139 (198)
...|++||.+++|+|.+|....
T Consensus 267 ~v~L~pGea~flpAg~~HAYl~ 288 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYIS 288 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEEE
T ss_pred eEecCCCCEEecCCCCccccCC
Confidence 4679999999999999998764
No 234
>2qdr_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE EPE; 2.60A {Nostoc punctiforme}
Probab=60.39 E-value=34 Score=28.38 Aligned_cols=64 Identities=13% Similarity=-0.018 Sum_probs=44.8
Q ss_pred ceEEEEEEEeCCcEe-cceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeE-------EEecCCC
Q 038563 72 GMSMVRADFDVGGVN-VPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHF-------QMNVGDT 143 (198)
Q Consensus 72 gls~~~~~l~pg~~~-~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~-------~~N~g~~ 143 (198)
|.....+.+.||... ..-.| .-.|=+|+|+|.. ..|+.++-|+|+.|- -.- .++
T Consensus 216 G~~TrLlr~~Pg~dt~~v~iH-dy~EEvY~LeG~~----------------d~G~Y~~RPpg~~HGps~~~~ppf~-Se~ 277 (303)
T 2qdr_A 216 GGGVWLLAILPHFDNKYQMIQ-PYNEEGYCLTGYC----------------DVGDYRIVKDHYWYCPSFSTLPRHI-TDD 277 (303)
T ss_dssp SCEEEEEEECSSEECCSEEEE-CSCEEEEEEEEEE----------------EETTEEEETTEEEEECTTEEECCEE-ESS
T ss_pred CCeEEEEEECCCCCCCCceee-ccceeEEEEeeec----------------cCceeeEcCCCCccCccccCCCCcC-cCC
Confidence 566677888888753 33346 4677799999976 348889999999997 442 356
Q ss_pred cEEEEEEEeC
Q 038563 144 WATILGSFDS 153 (198)
Q Consensus 144 ~~~~~~~~~s 153 (198)
.+.+++-.+.
T Consensus 278 G~l~fvR~Dg 287 (303)
T 2qdr_A 278 GGLFFVRVDR 287 (303)
T ss_dssp CEEEEEEESS
T ss_pred ceEEEEEeCc
Confidence 6777665543
No 235
>2qcs_B CAMP-dependent protein kinase type I-alpha regula subunit, CAMP-dependent protein kinase, alpha-catalytic SU; cyclic adenosine monophosphate; HET: SEP TPO ANP TAM; 2.20A {Bos taurus} PDB: 1rl3_A* 1rgs_A* 1ne6_A* 1ne4_A*
Probab=59.58 E-value=23 Score=27.99 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=35.3
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+++|..+-..-. .+..+++|++|++.+.. +|+. ...+.+||++
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~~~~---~g~~-~~~l~~G~~f 109 (291)
T 2qcs_B 62 MFPVSFIAGETVIQQGD-EGDNFYVIDQGEMDVYV---NNEW-ATSVGEGGSF 109 (291)
T ss_dssp CEEEEECTTCEEECTTS-BCCEEEEEEECCEEEEE---TTEE-EEEECTTCEE
T ss_pred ccEEEECCCCEEEeCCC-CCceEEEEeeeEEEEEE---CCeE-EEEcCCCCcc
Confidence 35567888887643323 46889999999999875 4543 5789999987
No 236
>1s4c_A Protein HI0227; double-stranded beta-helix, structural genomics, unknown function, structural genomics, unknown function; 2.20A {Haemophilus influenzae} SCOP: b.82.2.7 PDB: 1jop_A
Probab=58.59 E-value=19 Score=26.78 Aligned_cols=54 Identities=15% Similarity=0.080 Sum_probs=39.8
Q ss_pred ecceeCCCCCEEEEEEecEEEEEEEeCC--------------------C-eEEEEEEeCCcEEEECCCCeeEEEe
Q 038563 86 NVPHFHPRATEIAVVLEGKIYSGFVDTQ--------------------N-RIFAKVIEKGEVMVFPRGLVHFQMN 139 (198)
Q Consensus 86 ~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~--------------------~-~~~~~~l~~Gd~~~iP~G~~H~~~N 139 (198)
..+=.|.+-..+.|+++|+-++++.... + ......|++|++++|-++.+|....
T Consensus 60 ~~~E~Hr~YiDIq~~l~G~E~i~~~~~~~~~~~~~~y~~e~D~~~~~~~~~~~~v~l~~G~FaiFfP~d~H~p~~ 134 (155)
T 1s4c_A 60 KKAELHHEYLDVQVLIRGTENIEVGATYPNLSKYEDYNEADDYQLCADIDDKFTVTMKPKMFAVFYPYEPHKPCC 134 (155)
T ss_dssp SCEEECSSEEEEEEEEESCEEEEECCSCCCGGGSCCCBTTTTBEEESCCTTCEEEEECTTEEEEECTTCCEEEEE
T ss_pred cccccccceEEEEecceeeEEEEEEecccCcccCCCCCcCCCEEecCCCCccEEEEeCCCEEEEECCCccccccc
Confidence 4556777889999999998887775311 1 1124678999999999999998643
No 237
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=58.57 E-value=21 Score=27.18 Aligned_cols=49 Identities=4% Similarity=0.047 Sum_probs=34.0
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+.+|..+-.-- ..+..+++|++|++++...+. + ....+.+||++
T Consensus 148 ~~~~~~~~g~~i~~~g-~~~~~~y~I~~G~v~v~~~~~-~--~~~~l~~g~~f 196 (246)
T 3of1_A 148 LDTKIYQPGETIIREG-DQGENFYLIEYGAVDVSKKGQ-G--VINKLKDHDYF 196 (246)
T ss_dssp CEEEEECTTCEEECTT-SBCCEEEEEEECEEEEEETTT-E--EEEEEETTCEE
T ss_pred hheEEeCCCCEEEeCC-CcCCEEEEEEecEEEEEEcCC-c--eEEEcCCCCcc
Confidence 3456778888753322 246889999999999875422 2 35689999977
No 238
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=57.34 E-value=17 Score=27.44 Aligned_cols=51 Identities=14% Similarity=0.086 Sum_probs=35.9
Q ss_pred EEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEE
Q 038563 74 SMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVF 129 (198)
Q Consensus 74 s~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~i 129 (198)
.+....+.||..+-.--- ....+++|++|++.+.. +|. ....+.+||++-.
T Consensus 97 ~~~~~~~~~ge~I~~~G~-~~~~ly~I~~G~v~v~~---~~~-~~~~l~~G~~fGe 147 (212)
T 3ukn_A 97 IIKTSFCAPGEFLIRQGD-ALQAIYFVCSGSMEVLK---DNT-VLAILGKGDLIGS 147 (212)
T ss_dssp HCEEEEECTTCEEECTTS-BCCEEEEEEECCEEEES---SSC-EEEEECTTCEEEC
T ss_pred HhheEEeCCCCEEEECCC-cccEEEEEEecEEEEEE---CCe-EEEEecCCCCcCc
Confidence 344568889887633222 36889999999999764 343 3578999998843
No 239
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=53.41 E-value=19 Score=32.58 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=26.6
Q ss_pred EEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 117 FAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 117 ~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
+..+=++||++++++|..|+.+|.|-.-.+.+
T Consensus 338 yr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 338 YRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 46777999999999999999999997544443
No 240
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=53.25 E-value=13 Score=33.52 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=26.5
Q ss_pred EEEEEeCCcEEEECCCCeeEEEecCCCcEEEE
Q 038563 117 FAKVIEKGEVMVFPRGLVHFQMNVGDTWATIL 148 (198)
Q Consensus 117 ~~~~l~~Gd~~~iP~G~~H~~~N~g~~~~~~~ 148 (198)
+..+=++||++++++|..||.+|.|-...+.+
T Consensus 313 yr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaW 344 (510)
T 4ask_A 313 YRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 344 (510)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecCeeeeeEE
Confidence 35777999999999999999999997544444
No 241
>3of1_A CAMP-dependent protein kinase regulatory subunit; cyclic nucleotide binding domain, evolution, PKA signaling, transfer; HET: CMP; 2.21A {Saccharomyces cerevisiae}
Probab=51.21 E-value=20 Score=27.29 Aligned_cols=47 Identities=11% Similarity=0.061 Sum_probs=33.7
Q ss_pred EEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 76 VRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 76 ~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
....+++|..+-.--. .+..+++|++|++.+.. +++. ...+.+||++
T Consensus 31 ~~~~~~~g~~i~~~G~-~~~~~y~i~~G~v~v~~---~~~~-~~~~~~g~~f 77 (246)
T 3of1_A 31 EEKSVPKGATIIKQGD-QGDYFYVVEKGTVDFYV---NDNK-VNSSGPGSSF 77 (246)
T ss_dssp EEEEECTTCEEECTTC-CCCEEEEEEECCEEEES---TTSC-CEEECTTCEE
T ss_pred ceEEECCCCEEEecCC-CCCEEEEEEeeEEEEEE---CCEE-EEecCCCCee
Confidence 4567888886533323 46889999999999764 3443 3689999987
No 242
>1xru_A 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomer; beta barrel, cupin, isomerase; HET: 1PE; 1.94A {Escherichia coli} SCOP: b.82.1.13 PDB: 1x8m_A
Probab=46.71 E-value=39 Score=28.08 Aligned_cols=52 Identities=13% Similarity=0.067 Sum_probs=35.3
Q ss_pred CCCEEEE-EEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeEEEecC--CCcEEEEE
Q 038563 93 RATEIAV-VLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHFQMNVG--DTWATILG 149 (198)
Q Consensus 93 ~a~Ei~y-Vl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~~~N~g--~~~~~~~~ 149 (198)
...|+.+ .+.|++.+.+ +|+ .+.|..-|.+++|+|.-....... ..++++..
T Consensus 77 ~~rE~~iV~l~G~~~V~v---dG~--~f~lg~~dalYVp~g~~~v~~as~da~~~a~fav 131 (282)
T 1xru_A 77 ERRELGVINIGGAGTITV---DGQ--CYEIGHRDALYVGKGAKEVVFASIDTGTPAKFYY 131 (282)
T ss_dssp TTEEEEEEECSSCEEEEE---TTE--EEEECTTCEEEECTTCCCEEEEESCTTSCCCEEE
T ss_pred CCcEEEEEEccCeEEEEE---CCE--EEecCCCCEEEeCCCCeEEEEEecCCCCCeEEEE
Confidence 4566654 5778998876 466 358999999999999865444433 33555543
No 243
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=45.88 E-value=40 Score=26.70 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=35.4
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMV 128 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~ 128 (198)
+....+++|..+-..-. .+..+++|++|.+++.. +|+. ...+.+||++-
T Consensus 62 ~~~~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~---~g~~-~~~~~~G~~fG 110 (299)
T 3shr_A 62 MYPVEYGKDSCIIKEGD-VGSLVYVMEDGKVEVTK---EGVK-LCTMGPGKVFG 110 (299)
T ss_dssp CEEEEECTTCEEECTTC-BCCCEEEEEESCEEEEE---TTEE-EEEECTTCEES
T ss_pred cCeEEECCCCEEEcCCC-cCceEEEEEEEEEEEEE---CCEE-EEEeCCCCeee
Confidence 44568889887644433 46789999999999843 4553 46899999873
No 244
>3tnp_B CAMP-dependent protein kinase type II-beta regula subunit; PKA RIIB tetrameric holoenzyme, transferase; HET: SEP TPO; 2.30A {Mus musculus} PDB: 3tnq_A* 1cx4_A* 2qvs_B*
Probab=44.86 E-value=38 Score=28.93 Aligned_cols=52 Identities=12% Similarity=0.111 Sum_probs=34.4
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC------Ce-EEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ------NR-IFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~------~~-~~~~~l~~Gd~~ 127 (198)
+....+.+|..+-.- -..+..+++|++|++++...+.+ |+ .....+.+||+|
T Consensus 290 l~~~~~~~Ge~I~~e-Gd~~~~~yiI~sG~v~v~~~~~~~~~~~~g~~~~l~~l~~G~~f 348 (416)
T 3tnp_B 290 IGTKVYNDGEQIIAQ-GDLADSFFIVESGEVKITMKRKGKSEVEENGAVEIARCFRGQYF 348 (416)
T ss_dssp CEEEEECTTCEEECT-TSCCCEEEEEEEEEEEEECC------------CEEEEECTTCEE
T ss_pred ceEEEECCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCcccccCCceeEEEEeCCCCEe
Confidence 455678888865332 22468899999999998866543 42 345688999987
No 245
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.49 E-value=16 Score=24.83 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=25.3
Q ss_pred hhhhccCCCHHHHHHHhCCCHHHHHHHhhhcC
Q 038563 163 SAVFGSNIKEELLEKAFGLTPKEIAKLRKRFA 194 (198)
Q Consensus 163 ~~~f~~~~p~~vla~af~v~~~~v~~l~~~~~ 194 (198)
.++|- .+++|+|..-|+++.-.++|+.+-+.
T Consensus 47 G~lL~-~L~ee~L~edf~ls~Lq~kKi~~fI~ 77 (84)
T 2dkz_A 47 GNLLV-QLTEEILSEDFKLSKLQVKKIMQFIN 77 (84)
T ss_dssp HHHHH-HCCHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred hHHHH-hCCHHHHHhhcCCCHHHHHHHHHHHh
Confidence 35665 79999999999999999888876543
No 246
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=39.83 E-value=46 Score=23.08 Aligned_cols=23 Identities=13% Similarity=0.358 Sum_probs=17.8
Q ss_pred eCCCeEEEEEEeCCcEEEECCCC
Q 038563 111 DTQNRIFAKVIEKGEVMVFPRGL 133 (198)
Q Consensus 111 ~~~~~~~~~~l~~Gd~~~iP~G~ 133 (198)
+.+|+.....++.||.++|++|.
T Consensus 49 ~~~G~~~p~~VkvGD~Vlf~k~y 71 (97)
T 1pcq_O 49 LENGEVKPLDVKVGDIVIFNDGY 71 (97)
T ss_dssp TTSSSCEECSCCTTCEEEECCCS
T ss_pred cCCCCEEecccCCCCEEEECCcc
Confidence 45576556779999999999943
No 247
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=39.22 E-value=29 Score=29.20 Aligned_cols=49 Identities=12% Similarity=0.138 Sum_probs=33.4
Q ss_pred EEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCe--EEEEEEeCCcEE
Q 038563 78 ADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNR--IFAKVIEKGEVM 127 (198)
Q Consensus 78 ~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~--~~~~~l~~Gd~~ 127 (198)
..+.+|..+-.- -..+..+++|++|++++...+.+++ .....+.+||+|
T Consensus 274 ~~~~~ge~I~~e-Gd~~~~~yiI~~G~v~v~~~~~~~~~~~~v~~l~~Gd~f 324 (381)
T 4din_B 274 VQFEDGEKIVVQ-GEPGDDFYIITEGTASVLQRRSPNEEYVEVGRLGPSDYF 324 (381)
T ss_dssp CCBCSSCBSSCT-TSBCCEEEEEEESCEEEECCSSSSSCCCEEEEECTTCEE
T ss_pred ccCCCCCEEEeC-CCcCCEEEEEEeCEEEEEEecCCCCceEEEEEeCCCCEe
Confidence 456666654222 2246789999999999987655442 335789999987
No 248
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=39.06 E-value=74 Score=30.41 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=39.7
Q ss_pred cceEEEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCC---CeEEEEEEeCCcEE
Q 038563 71 LGMSMVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQ---NRIFAKVIEKGEVM 127 (198)
Q Consensus 71 ~gls~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~---~~~~~~~l~~Gd~~ 127 (198)
+--.|....+++|..+-.-=. .++.+++|++|++.+.+.+++ .......+.+||.|
T Consensus 61 l~~~m~ye~~~~Ge~IfrqGd-~gd~fYIIlsGsV~V~i~~~~~~~~~~~v~~l~~G~sF 119 (999)
T 4f7z_A 61 ICLCGYYENLEKGITLFRQGD-IGTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAF 119 (999)
T ss_dssp HHHHCEEEEECTTCEEECTTS-CCCEEEEEEESEEEEEECSSSCTTSCEEEEEEETTCEE
T ss_pred HHhheEEEEECCCCEEEcCCC-cCCEEEEEEeeEEEEEEecCCCCCCceeEEEecCCcch
Confidence 334566678888886533334 578899999999999876443 23345789999987
No 249
>1wgp_A Probable cyclic nucleotide-gated ION channel 6; cyclic nucleotide monophosphate, CNMP, CNMP-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.82.3.2
Probab=38.71 E-value=5.5 Score=27.71 Aligned_cols=49 Identities=14% Similarity=0.164 Sum_probs=31.3
Q ss_pred EEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEE---EEEEeCCcEE
Q 038563 77 RADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIF---AKVIEKGEVM 127 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~---~~~l~~Gd~~ 127 (198)
...+++|..+-. -......+++|++|++++. .+.+|+.. ...+.+||++
T Consensus 31 ~~~~~~g~~i~~-~G~~~~~~y~i~~G~v~~~-~~~~g~~~~~~~~~l~~G~~f 82 (137)
T 1wgp_A 31 PCLFTEKSYLVR-EGDPVNEMLFIIRGRLESV-TTDGGRSGFYNRSLLKEGDFC 82 (137)
T ss_dssp CCCBCTTEEEEC-TTSBCSEEEEEEECCCEEE-CCSSCSSSSSCEEECCTTCBS
T ss_pred EEEeCCCCEEEe-CCCCCCeEEEEEeeEEEEE-EcCCCcceeeeeeeecCCCEe
Confidence 346677765522 2234678999999999954 45556421 1278899965
No 250
>1o7f_A CAMP-dependent RAP1 guanine-nucleotide exchange factor; EPAC2, CAMP-GEF2, campb binding doamin, regulation; 2.5A {Mus musculus} SCOP: a.4.5.31 b.82.3.2 b.82.3.2
Probab=38.30 E-value=60 Score=27.56 Aligned_cols=46 Identities=13% Similarity=0.156 Sum_probs=33.2
Q ss_pred EEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 78 ADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 78 ~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
..+++|..+-.--. .+..+++|++|++.+... ++.....+.+||+|
T Consensus 364 ~~~~~g~~i~~~G~-~~~~~yiI~~G~v~v~~~---~~~~~~~l~~G~~f 409 (469)
T 1o7f_A 364 SHAKGGTVLFNQGE-EGTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 409 (469)
T ss_dssp EECSTTCEEECTTS-CCCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred eEecCCCEEEeCCC-cCCeEEEEEEeEEEEEEc---CCeeEEEecCCCEE
Confidence 47888887633323 468899999999998752 33245789999977
No 251
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=30.83 E-value=7.3 Score=21.45 Aligned_cols=12 Identities=17% Similarity=0.429 Sum_probs=8.9
Q ss_pred CCC-CCCCCCCCC
Q 038563 21 SAT-TSLPCKNSS 32 (198)
Q Consensus 21 ~~~-~g~~ck~~~ 32 (198)
.++ ||+-||.|-
T Consensus 21 gkvwngfdckspf 33 (36)
T 1iyc_A 21 GKVWNGFDCKSPF 33 (36)
T ss_dssp SCEEETTEEECGG
T ss_pred cceecCccccCcc
Confidence 345 999999873
No 252
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=30.36 E-value=69 Score=17.33 Aligned_cols=28 Identities=11% Similarity=0.020 Sum_probs=23.5
Q ss_pred cCCCHHHHHHHhCCCHHHHHHHhhhcCC
Q 038563 168 SNIKEELLEKAFGLTPKEIAKLRKRFAP 195 (198)
Q Consensus 168 ~~~p~~vla~af~v~~~~v~~l~~~~~~ 195 (198)
.+++..-+|+.++++..+|.+..+.+..
T Consensus 20 ~g~s~~~IA~~lgis~~Tv~~~~~~~~~ 47 (51)
T 1tc3_C 20 LNVSLHEMSRKISRSRHCIRVYLKDPVS 47 (51)
T ss_dssp TTCCHHHHHHHHTCCHHHHHHHHHCSTT
T ss_pred cCCCHHHHHHHHCcCHHHHHHHHhhHHh
Confidence 4788889999999999999988766543
No 253
>3cf6_E RAP guanine nucleotide exchange factor (GEF) 4; EPAC, rapgef4, CAMP, SP-camps, GEF, gunanine nucleotide exchange factor, G-protein, GTP-binding, nucleotide-binding; HET: SP1; 2.20A {Mus musculus}
Probab=27.10 E-value=1.1e+02 Score=28.33 Aligned_cols=47 Identities=13% Similarity=0.176 Sum_probs=33.9
Q ss_pred EEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 77 RADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
...+++|..+-.. ...+..+++|++|.+++... |+.....+.+||++
T Consensus 58 ~~~~~kGe~I~~e-Gd~~~~lyiIlsG~V~v~~~---g~~il~~l~~Gd~f 104 (694)
T 3cf6_E 58 ESHAKGGTVLFNQ-GEEGTSWYIILKGSVNVVIY---GKGVVCTLHEGDDF 104 (694)
T ss_dssp EEECSTTCEEECT-TSBCCEEEEEEESEEEEEET---TTEEEEEEETTCEE
T ss_pred EEEECCCCEEECC-CCcCCeEEEEEEEEEEEEEe---CCEEEEEeCCCCEe
Confidence 4578888876332 33467899999999998753 33345789999977
No 254
>4din_B CAMP-dependent protein kinase type I-beta regulat subunit, CAMP-dependent protein kinase catalytic subunit A; isoform diversity; HET: TPO SEP ATP; 3.70A {Homo sapiens}
Probab=26.39 E-value=48 Score=27.79 Aligned_cols=48 Identities=15% Similarity=0.150 Sum_probs=35.2
Q ss_pred EEEEEEeCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 75 MVRADFDVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 75 ~~~~~l~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+....+++|..+-.--. .+..+++|++|++.+.. +|+. ...+.+||++
T Consensus 153 ~~~~~~~~ge~I~~~Gd-~~~~~yiI~~G~v~v~~---~~~~-v~~l~~G~~f 200 (381)
T 4din_B 153 MFPVTHIAGETVIQQGN-EGDNFYVVDQGEVDVYV---NGEW-VTNISEGGSF 200 (381)
T ss_dssp CEEEECCTTCBSSCTTS-BCCEEEECSSSEEEEEE---TTEE-EEEEESSCCB
T ss_pred ceEEEECCCCEEEeCCC-CCCeEEEEEeeEEEEEE---CCeE-eeeCCCCCEE
Confidence 55678888887644333 46889999999999875 3554 3579999976
No 255
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=24.90 E-value=57 Score=29.04 Aligned_cols=51 Identities=14% Similarity=0.081 Sum_probs=36.3
Q ss_pred EEEEeCCcEecceeCC-CCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCeeE
Q 038563 77 RADFDVGGVNVPHFHP-RATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLVHF 136 (198)
Q Consensus 77 ~~~l~pg~~~~pH~Hp-~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~H~ 136 (198)
|....++...+|-+|. -.+|+++.+.|.... | ..-+.+|.+-+-|.+.+|-
T Consensus 347 Rw~v~e~TfrpPyyHrNv~SEfmgli~G~y~a-------k--~~Gf~pGg~SLH~~~~pHG 398 (471)
T 1eyb_A 347 RWGVADKTFRPPYYHRNCMSEFMGLIRGHYEA-------K--QGGFLPGGGSLHSTMTPHG 398 (471)
T ss_dssp EEECCSSSCCSCCCBCCSCEEEEEECCC-----------------CCTTCEEEECTTCCBC
T ss_pred ccCCCCCccCCCCCccchhhhhhhhccccccc-------c--ccCcCCCceeccCCCcCCC
Confidence 5677888889998883 345899999998542 2 1247999999999999995
No 256
>4f7z_A RAP guanine nucleotide exchange factor 4; cyclic nucleotide, regulation, auto-IN CDC25 homology domain, exocytosis; 2.60A {Mus musculus} PDB: 2byv_E
Probab=24.84 E-value=1e+02 Score=29.36 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=27.8
Q ss_pred eCCcEecceeCCCCCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEE
Q 038563 81 DVGGVNVPHFHPRATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVM 127 (198)
Q Consensus 81 ~pg~~~~pH~Hp~a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~ 127 (198)
+.|..+--. -..+..+++|++|++.+.. ..++. ..+|++||.|
T Consensus 367 kaGtvI~rQ-GE~gds~YIIlsG~V~V~~-~~~~~--v~~L~~Gd~F 409 (999)
T 4f7z_A 367 KGGTVLFNQ-GEEGTSWYIILKGSVNVVI-YGKGV--VCTLHEGDDF 409 (999)
T ss_dssp STTCEEECT-TSBCCEEEEEEESEEEEEE-TTTEE--EEEEETTCEE
T ss_pred cCCCEEEeC-CCcCCeEEEEEeeEEEEEE-cCCcc--eEEecCCCcc
Confidence 344444322 2346778999999998764 22233 4689999988
No 257
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=23.68 E-value=2.6e+02 Score=21.65 Aligned_cols=32 Identities=3% Similarity=0.008 Sum_probs=24.2
Q ss_pred CCEEEEEEecEEEEEEEeCCCeEEEEEEeCCcEEEECCCCe
Q 038563 94 ATEIAVVLEGKIYSGFVDTQNRIFAKVIEKGEVMVFPRGLV 134 (198)
Q Consensus 94 a~Ei~yVl~G~~~~~~~~~~~~~~~~~l~~Gd~~~iP~G~~ 134 (198)
..-++|+++|.+.+. + ..|.+||++++-....
T Consensus 143 ~~~lv~~~~G~~~v~-----~----~~L~~~D~L~~~~~~~ 174 (193)
T 3esg_A 143 QTVLVFSVADEVKVL-----G----EKLGHHDCLQVDGNAG 174 (193)
T ss_dssp SEEEEEECSSCEEET-----T----EEECTTCEEEECSCCS
T ss_pred CEEEEEEeeCCEEEE-----E----EecCCCCEEEEeCCcc
Confidence 355899999998764 2 4899999998876543
No 258
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.03 E-value=67 Score=25.58 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=24.1
Q ss_pred eEEEEEEeCCcEEEECCCCeeEEE-ecCCCc
Q 038563 115 RIFAKVIEKGEVMVFPRGLVHFQM-NVGDTW 144 (198)
Q Consensus 115 ~~~~~~l~~Gd~~~iP~G~~H~~~-N~g~~~ 144 (198)
+.....+++||++++-..++|.-. |.++.+
T Consensus 226 ~~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~ 256 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGEVVHKSKQNLSDRS 256 (291)
T ss_dssp GCEEECBCTTCEEEEETTCEEEECCBCSSSC
T ss_pred CeeecccCCCcEEEEcCCceecCCCCCCCCc
Confidence 345678999999999999999864 666543
No 259
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=20.83 E-value=96 Score=24.69 Aligned_cols=15 Identities=7% Similarity=-0.117 Sum_probs=11.8
Q ss_pred EEEeCCcEEEECCCC
Q 038563 119 KVIEKGEVMVFPRGL 133 (198)
Q Consensus 119 ~~l~~Gd~~~iP~G~ 133 (198)
..+.|||.+++|...
T Consensus 190 ~~l~PG~~I~Vp~~~ 204 (236)
T 3p42_A 190 VEPPPGSQLWLGFSA 204 (236)
T ss_dssp EECCTTCEEEECBCT
T ss_pred CCCCCCCEEEEeCCc
Confidence 468999999888753
Done!