BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038564
MVRNHSNHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAKVGHDF
KYETSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGM
AVGVGGEILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGF
LKASSEEALFMDVEEVRKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFL
GGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSRVLQRVKDEVQRRKLSCSERRD
EEIEFMKPEGHEQFHSFLCSAKLVSACAMQECLKDFPGITREQGFLSQNNGQI

High Scoring Gene Products

Symbol, full name Information P value
Mik
AT5G58730 		protein from Arabidopsis thaliana 2.8e-105

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038564
        (353 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2178883 - symbol:Mik "AT5G58730" species:3702 ...  1042  2.8e-105  1


>TAIR|locus:2178883 [details] [associations]
            symbol:Mik "AT5G58730" species:3702 "Arabidopsis
            thaliana" [GO:0016301 "kinase activity" evidence=ISS] [GO:0016773
            "phosphotransferase activity, alcohol group as acceptor"
            evidence=IEA] [GO:0010264 "myo-inositol hexakisphosphate
            biosynthetic process" evidence=IMP] InterPro:IPR002173
            PROSITE:PS00584 Pfam:PF00294 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0016301 GO:GO:0016773
            InterPro:IPR011611 GO:GO:0010264 HSSP:Q9TVW2 EMBL:AY058873
            EMBL:AY084481 EMBL:AY103302 IPI:IPI00521299 RefSeq:NP_200681.1
            UniGene:At.24607 UniGene:At.75561 ProteinModelPortal:Q93Z01
            IntAct:Q93Z01 PRIDE:Q93Z01 EnsemblPlants:AT5G58730.1 GeneID:835987
            KEGG:ath:AT5G58730 TAIR:At5g58730 eggNOG:NOG129060
            HOGENOM:HOG000029334 InParanoid:Q93Z01 OMA:VGSYCHD PhylomeDB:Q93Z01
            ProtClustDB:PLN02630 Genevestigator:Q93Z01 Uniprot:Q93Z01
        Length = 353

 Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
 Identities = 202/320 (63%), Positives = 242/320 (75%)

Query:     3 RNHSNHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY 62
             R   N  +LIVGNYCHDVLI+NG+V+AETLGGAASFISNVL+  S+SC L++KVGHDF+Y
Sbjct:    16 RRIPNRRVLIVGNYCHDVLIQNGSVVAETLGGAASFISNVLDSSSVSCDLVSKVGHDFRY 75

Query:    63 ETSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAV 122
             E ++ PI+ P  +TTVF AYFD      GHADRVLKRV +C+PI PSD+PD +FD+GMAV
Sbjct:    76 EVTHSPIVAPEKETTVFEAYFDLGIDGIGHADRVLKRVSACDPILPSDIPDSRFDFGMAV 135

Query:   123 GVGGEILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLK 182
             GVGGEILPETLEKM+EIC+VV VDIQ++IRVFD VDG V  V LKESGFYH+L +IGFLK
Sbjct:   136 GVGGEILPETLEKMVEICDVVAVDIQALIRVFDPVDGAVKLVDLKESGFYHILHRIGFLK 195

Query:   183 ASSEEALFMDVEEVRKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFXXX 242
             ASS+EALFMDVE+++ LCCVVVTNG +G  +Y++D ++ V PFLA Q+DPTGAGDSF   
Sbjct:   196 ASSDEALFMDVEQMKHLCCVVVTNGEKGCRIYHKDDEMTVPPFLAKQVDPTGAGDSFLGG 255

Query:   243 XXXXXXXXXXXPDAALLGNFFGSITVAQIGLPKFDSRVLQRVKDEVQRRKLSCSERRDEE 302
                        PDAALLGN FGSITV  IG PKFD  +LQ+VKDEVQRRK  C+      
Sbjct:   256 LIVGLVEGLTVPDAALLGNLFGSITVEHIGQPKFDLMMLQKVKDEVQRRKKQCN------ 309

Query:   303 IEFMKPEGHEQFHSFLCSAK 322
             I       H +FH  L  A+
Sbjct:   310 ISSSHNNDHNEFHERLSPAR 329


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      353       339   0.00094  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  594 (63 KB)
  Total size of DFA:  215 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  26.18u 0.08s 26.26t   Elapsed:  00:00:02
  Total cpu time:  26.18u 0.08s 26.26t   Elapsed:  00:00:05
  Start:  Sat May 11 12:35:54 2013   End:  Sat May 11 12:35:59 2013

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