Query 038564
Match_columns 353
No_of_seqs 253 out of 1605
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 21:28:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3go6_A Ribokinase RBSK; phosph 100.0 3.7E-40 1.3E-44 307.7 19.5 262 5-288 17-305 (310)
2 3iq0_A Putative ribokinase II; 100.0 7.7E-40 2.6E-44 308.1 20.8 274 6-289 2-314 (330)
3 3ikh_A Carbohydrate kinase; tr 100.0 1.7E-40 5.8E-45 308.4 15.9 264 6-290 1-291 (299)
4 3ktn_A Carbohydrate kinase, PF 100.0 1.1E-39 3.6E-44 309.0 19.6 280 6-295 1-339 (346)
5 2c4e_A Sugar kinase MJ0406; tr 100.0 5.1E-39 1.7E-43 298.8 23.5 268 1-288 1-300 (302)
6 2rbc_A Sugar kinase, AGR_C_456 100.0 4.7E-39 1.6E-43 304.3 21.9 275 1-294 23-335 (343)
7 3pl2_A Sugar kinase, ribokinas 100.0 4.7E-39 1.6E-43 301.1 20.4 276 1-287 2-317 (319)
8 3ljs_A Fructokinase; fructokia 100.0 1.5E-39 5.2E-44 307.0 15.1 275 6-290 3-331 (338)
9 3ry7_A Ribokinase; transferase 100.0 5.5E-39 1.9E-43 298.6 17.8 260 6-283 1-303 (304)
10 3hj6_A Fructokinase, FRK; fruc 100.0 6.4E-40 2.2E-44 308.2 11.1 275 1-286 15-326 (327)
11 3h49_A Ribokinase; transferase 100.0 2E-38 7E-43 297.7 20.6 276 6-294 4-321 (325)
12 3ewm_A Uncharacterized sugar k 100.0 1.9E-38 6.4E-43 296.4 17.7 271 7-289 1-302 (313)
13 2v78_A Fructokinase; transfera 100.0 3.1E-38 1.1E-42 294.9 18.5 268 7-288 1-311 (313)
14 3b1n_A Ribokinase, putative; r 100.0 2.4E-37 8.1E-42 290.7 24.2 271 9-296 2-314 (326)
15 1rkd_A Ribokinase; carbohydrat 100.0 6.4E-38 2.2E-42 292.1 20.2 262 7-286 4-306 (309)
16 4du5_A PFKB; structural genomi 100.0 3.2E-38 1.1E-42 297.8 17.7 269 6-284 25-334 (336)
17 2dcn_A Hypothetical fructokina 100.0 4.1E-38 1.4E-42 293.7 17.6 268 7-289 1-310 (311)
18 3kzh_A Probable sugar kinase; 100.0 3E-38 1E-42 297.0 16.8 269 5-291 4-313 (328)
19 1v1a_A 2-keto-3-deoxygluconate 100.0 7.4E-38 2.5E-42 291.8 19.2 267 7-286 1-302 (309)
20 4gm6_A PFKB family carbohydrat 100.0 8.1E-38 2.8E-42 296.6 19.0 275 3-287 20-344 (351)
21 2nwh_A AGR_C_3442P, carbohydra 100.0 8.5E-38 2.9E-42 292.5 18.6 273 6-294 2-315 (317)
22 4e3a_A Sugar kinase protein; s 100.0 4E-38 1.4E-42 299.0 16.5 263 5-279 23-343 (352)
23 3ie7_A LIN2199 protein; phosph 100.0 4.1E-37 1.4E-41 288.2 19.9 267 6-297 1-313 (320)
24 1tyy_A Putative sugar kinase; 100.0 1.5E-37 5.1E-42 293.6 16.4 269 8-288 25-330 (339)
25 1vm7_A Ribokinase; TM0960, str 100.0 1.2E-36 4.1E-41 284.0 21.9 261 5-287 12-310 (311)
26 2qcv_A Putative 5-dehydro-2-de 100.0 9.1E-37 3.1E-41 287.1 20.8 272 7-288 11-326 (332)
27 3vas_A Putative adenosine kina 100.0 6.3E-38 2.1E-42 299.6 12.1 262 5-279 22-362 (370)
28 2pkf_A Adenosine kinase; trans 100.0 1.1E-36 3.9E-41 286.9 20.2 267 8-289 11-321 (334)
29 3otx_A Adenosine kinase, putat 100.0 3.2E-37 1.1E-41 292.1 16.4 255 6-273 6-337 (347)
30 3loo_A Anopheles gambiae adeno 100.0 2.6E-37 8.9E-42 294.8 14.3 256 5-273 21-353 (365)
31 4e69_A 2-dehydro-3-deoxyglucon 100.0 6.2E-37 2.1E-41 288.1 16.5 258 5-273 21-315 (328)
32 3kd6_A Carbohydrate kinase, PF 100.0 4.7E-36 1.6E-40 280.2 21.9 268 6-289 1-299 (313)
33 2fv7_A Ribokinase; structural 100.0 6.6E-37 2.3E-41 288.2 15.4 250 7-273 24-316 (331)
34 2jg1_A Tagatose-6-phosphate ki 100.0 2.3E-36 7.7E-41 284.5 17.1 263 5-292 18-329 (330)
35 3lhx_A Ketodeoxygluconokinase; 100.0 1.2E-36 4E-41 285.0 14.2 256 7-273 4-302 (319)
36 2hlz_A Ketohexokinase; non-pro 100.0 1.9E-35 6.7E-40 275.9 21.7 257 6-275 16-310 (312)
37 2f02_A Tagatose-6-phosphate ki 100.0 4.3E-36 1.5E-40 281.7 17.0 264 7-295 2-315 (323)
38 1bx4_A Protein (adenosine kina 100.0 2.2E-36 7.5E-41 286.1 15.1 259 1-273 1-336 (345)
39 3bf5_A Ribokinase related prot 100.0 6.2E-36 2.1E-40 278.6 17.4 256 5-288 18-301 (306)
40 3umo_A 6-phosphofructokinase i 100.0 1.8E-35 6.1E-40 275.6 19.0 259 8-289 2-308 (309)
41 2ajr_A Sugar kinase, PFKB fami 100.0 9.6E-36 3.3E-40 280.3 16.9 263 7-293 12-330 (331)
42 2qhp_A Fructokinase; NP_810670 100.0 1.4E-35 5E-40 274.5 16.2 251 6-275 2-285 (296)
43 3cqd_A 6-phosphofructokinase i 100.0 6E-35 2.1E-39 272.0 18.6 257 8-289 2-308 (309)
44 3uq6_A Adenosine kinase, putat 100.0 4.7E-36 1.6E-40 286.8 11.2 254 7-273 26-358 (372)
45 2afb_A 2-keto-3-deoxygluconate 100.0 1.2E-34 4.2E-39 274.7 20.6 270 7-287 12-343 (351)
46 4e84_A D-beta-D-heptose 7-phos 100.0 7.5E-36 2.6E-40 283.3 12.0 256 5-282 51-351 (352)
47 2jg5_A Fructose 1-phosphate ki 100.0 6.2E-34 2.1E-38 264.7 17.8 257 9-293 2-303 (306)
48 2abs_A Adenosine kinase, AK; r 100.0 3.3E-34 1.1E-38 275.0 15.9 255 7-273 32-374 (383)
49 2abq_A Fructose 1-phosphate ki 100.0 1.7E-33 5.8E-38 261.9 18.9 254 9-290 2-300 (306)
50 1vk4_A PFKB carbohydrate kinas 100.0 5.9E-31 2E-35 244.0 18.0 249 7-274 11-284 (298)
51 1jxh_A Phosphomethylpyrimidine 99.7 6.5E-17 2.2E-21 148.8 13.4 147 120-271 96-269 (288)
52 1ub0_A THID, phosphomethylpyri 99.7 1.1E-16 3.9E-21 144.5 13.2 138 129-271 81-244 (258)
53 2ddm_A Pyridoxine kinase; pyri 99.7 2.6E-16 8.8E-21 144.2 13.4 137 131-271 104-267 (283)
54 2i5b_A Phosphomethylpyrimidine 99.7 3.7E-16 1.3E-20 142.3 12.9 146 121-271 77-250 (271)
55 2yxt_A Pyridoxal kinase; beta 99.7 2.6E-16 9E-21 146.2 12.1 100 170-270 135-269 (312)
56 3h74_A Pyridoxal kinase; PSI-I 99.6 6E-15 2.1E-19 135.1 10.3 137 129-270 85-248 (282)
57 3mbh_A Putative phosphomethylp 99.6 1.3E-14 4.4E-19 133.5 11.3 157 129-291 91-282 (291)
58 3pzs_A PM kinase, pyridoxamine 99.5 1.7E-14 5.8E-19 132.6 8.9 99 173-271 137-260 (289)
59 3zs7_A Pyridoxal kinase; trans 99.4 1.1E-12 3.7E-17 121.1 12.1 100 169-270 134-261 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.2 1.2E-10 4E-15 106.0 10.4 161 117-285 57-253 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.1 5.8E-10 2E-14 111.1 11.4 96 173-268 148-273 (550)
62 3bgk_A SMU.573, putative uncha 98.4 3.9E-06 1.3E-10 77.3 12.8 90 176-268 178-283 (311)
63 1v8a_A Hydroxyethylthiazole ki 98.1 6E-06 2E-10 74.4 8.3 87 178-267 114-224 (265)
64 3rpz_A ADP/ATP-dependent NAD(P 98.1 1.4E-05 4.7E-10 72.4 10.3 111 176-287 144-273 (279)
65 2r3b_A YJEF-related protein; p 98.0 1.8E-05 6.2E-10 72.8 9.9 90 176-268 164-266 (310)
66 3rss_A Putative uncharacterize 97.9 8.6E-05 2.9E-09 72.7 11.6 111 175-287 369-495 (502)
67 3dzv_A 4-methyl-5-(beta-hydrox 97.1 0.0025 8.5E-08 57.3 10.2 87 177-264 115-230 (273)
68 3k5w_A Carbohydrate kinase; 11 95.4 0.18 6.2E-06 48.7 13.1 137 133-288 309-467 (475)
69 3hpd_A Hydroxyethylthiazole ki 94.2 0.18 6.3E-06 44.7 8.8 84 177-262 113-219 (265)
70 3nl6_A Thiamine biosynthetic b 93.0 0.83 2.8E-05 44.9 12.0 92 171-263 354-495 (540)
71 1ua4_A Glucokinase, ADP-depend 85.7 0.97 3.3E-05 43.3 5.6 29 31-59 109-139 (455)
72 1gc5_A ADP-dependent glucokina 62.8 1.4 4.8E-05 42.3 -0.3 29 31-59 117-147 (467)
73 1l2l_A ADP-dependent glucokina 60.2 6 0.0002 37.8 3.5 29 31-59 112-142 (457)
74 3drw_A ADP-specific phosphofru 59.1 5.7 0.00019 38.1 3.2 30 29-58 113-143 (474)
75 1ua4_A Glucokinase, ADP-depend 55.8 8.5 0.00029 36.7 3.8 31 219-249 421-453 (455)
76 1gc5_A ADP-dependent glucokina 55.3 7.2 0.00025 37.4 3.2 21 228-248 442-463 (467)
77 4gcm_A TRXR, thioredoxin reduc 43.2 24 0.00081 31.0 4.5 20 35-54 17-36 (312)
78 2gk4_A Conserved hypothetical 34.3 38 0.0013 29.1 4.2 51 7-57 3-53 (232)
79 1yvv_A Amine oxidase, flavin-c 33.6 42 0.0014 29.5 4.6 21 35-55 13-33 (336)
80 1ztd_A Hypothetical protein PF 33.1 35 0.0012 25.5 3.1 33 229-261 63-96 (133)
81 3lzw_A Ferredoxin--NADP reduct 32.8 20 0.0007 31.4 2.3 22 34-55 17-38 (332)
82 1u7z_A Coenzyme A biosynthesis 31.6 50 0.0017 28.2 4.4 50 5-54 6-55 (226)
83 4fk1_A Putative thioredoxin re 30.6 46 0.0016 29.0 4.3 23 33-55 14-37 (304)
84 3e1t_A Halogenase; flavoprotei 29.4 40 0.0014 32.2 3.9 21 35-55 18-38 (512)
85 3ihm_A Styrene monooxygenase A 28.7 34 0.0012 31.9 3.3 21 35-55 33-53 (430)
86 3fbs_A Oxidoreductase; structu 28.0 57 0.0019 27.9 4.4 21 35-55 13-33 (297)
87 3g5s_A Methylenetetrahydrofola 26.4 57 0.0019 30.8 4.1 23 33-55 10-32 (443)
88 3f8d_A Thioredoxin reductase ( 24.9 61 0.0021 28.0 4.1 23 33-55 24-46 (323)
89 4hb9_A Similarities with proba 24.5 58 0.002 29.4 4.0 19 35-53 12-30 (412)
90 2wdq_A Succinate dehydrogenase 23.3 52 0.0018 32.2 3.5 25 32-56 15-39 (588)
91 2xdo_A TETX2 protein; tetracyc 23.1 72 0.0025 29.0 4.3 21 35-55 37-57 (398)
92 3cra_A Protein MAZG; tandem-re 23.0 1E+02 0.0035 27.0 4.9 57 235-291 196-261 (265)
93 2r6j_A Eugenol synthase 1; phe 22.8 98 0.0033 26.9 5.0 39 1-55 5-43 (318)
No 1
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=3.7e-40 Score=307.69 Aligned_cols=262 Identities=15% Similarity=0.093 Sum_probs=218.7
Q ss_pred CCcccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------C
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------E 63 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~ 63 (353)
.||++|+|+|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+| +
T Consensus 17 ~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~~g 96 (310)
T 3go6_A 17 PMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANA 96 (310)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHHTT
T ss_pred cccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcC
Confidence 4678999999999999976431 467889999999999999999999999999999776 3
Q ss_pred cccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHHHhhhh
Q 038564 64 TSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLEICNVV 143 (353)
Q Consensus 64 vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 143 (353)
|+++++...+.+|+.+++.++. +++++++...+++..++ ++ ...+...++++++++.+.+.+.++++.++.
T Consensus 97 V~~~~v~~~~~~T~~~~~~~~~-----~g~~~~~~~~ga~~~l~--~~-~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~- 167 (310)
T 3go6_A 97 VGLDRTVTVPGPSGTAIIVVDA-----SAENTVLVAPGANAHLT--PV-PSAVANCDVLLTQLEIPVATALAAARAAQS- 167 (310)
T ss_dssp CBCTTCEECSSCCEEEEEEECT-----TSCEEEEEECGGGGGCC--CC-TTTTTTCSEEEECSSSCHHHHHHHHHHHHH-
T ss_pred CccceeEecCCCCCEEEEEEcC-----CCCEEEEecCChhhhHH--HH-HHHhhcCCEEEECCCCCHHHHHHHHHHHHH-
Confidence 8888887666799999888864 45667766677766666 44 334667788899888888999999998876
Q ss_pred hcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCCHHHHhccCeEEEeeCCCceEEEEcCceEEEc
Q 038564 144 LVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMDVEEVRKLCCVVVTNGREGSEVYYRDGKVKVS 223 (353)
Q Consensus 144 ~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~~~~~~~~~~vvvT~G~~Ga~~~~~~~~~~~p 223 (353)
.+...++|+++... ..+.+.++++++|++++|++|+..+... .+.||||+|++|++++++++.+++|
T Consensus 168 ----~g~~v~~D~~~~~~-----~~~~~~~ll~~~dil~~N~~Ea~~l~g~----~~~vvvt~G~~Ga~~~~~~~~~~~~ 234 (310)
T 3go6_A 168 ----ADAVVMVNASPAGQ-----DRSSLQDLAAIADVVIANEHEANDWPSP----PTHFVITLGVRGARYVGADGVFEVP 234 (310)
T ss_dssp ----TTCEEEEECCSSSC-----CHHHHHHHHHHCSEEEEEHHHHHHSSSC----CSEEEEECGGGCEEEEETTEEEEEC
T ss_pred ----cCCEEEEcCCcccc-----chHHHHHHHhhCCEEEeCHHHHHHHhCC----CCEEEEEECCCCEEEEECCceEEeC
Confidence 56667888864321 2345668899999999999999876422 7899999999999999998899999
Q ss_pred CccccccCCCCCchHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHHHhHh
Q 038564 224 PFLANQIDPTGAGDSFLGGLVTGLVQ----GLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQRVKDEV 288 (353)
Q Consensus 224 a~~v~~vDttGAGDaF~agfl~~l~~----g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~~~~~i 288 (353)
+++++++|||||||+|+|||+++|++ |+++++|+++|+++|+++|++.|. ...+.+++++++++.
T Consensus 235 ~~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 305 (310)
T 3go6_A 235 APTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRAN 305 (310)
T ss_dssp CCCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTTSSCSTTCCCCHHHHHHHHHTC
T ss_pred CCCCCcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHhc
Confidence 99999999999999999999999999 999999999999999999999996 456789999988764
No 2
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=7.7e-40 Score=308.07 Aligned_cols=274 Identities=17% Similarity=0.242 Sum_probs=215.2
Q ss_pred CcccEEEEccceeeeeeccCc--------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccc
Q 038564 6 SNHGILIVGNYCHDVLIRNGT--------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYR 67 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~--------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~ 67 (353)
||++|+|+|++++|++...+. ....++||++.|+|++|++||.++.++|.+|+|.+| +|+++
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~ 81 (330)
T 3iq0_A 2 SLSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIR 81 (330)
T ss_dssp --CEEEEESCCEEEEEEEEETCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCT
T ss_pred CCCCEEEEcceeEEEeccCCCCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHHcCCCee
Confidence 578999999999999975322 134678999999999999999999999999999877 38998
Q ss_pred eee-cCCCCCeEEEEEecccCCCCCCcc-EEEee-cCCCCCCCCCCCCCccccccceeeecCC-----CcHHHHHHHHHH
Q 038564 68 PII-VPTSKTTVFHAYFDSISAPSGHAD-RVLKR-VCSCEPITPSDLPDGKFDYGMAVGVGGE-----ILPETLEKMLEI 139 (353)
Q Consensus 68 ~v~-~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~-~~a~~~l~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 139 (353)
++. .++.+|+.+++.++. ++++ ..+.. .++...++++++....+...+++++.+. .+.+.+.++++.
T Consensus 82 ~v~~~~~~~T~~~~i~~~~-----~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~sg~~~~~~~~~~~~~~~~~~ 156 (330)
T 3iq0_A 82 GISVLPLEATGSAFVTYHN-----SGDRDFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTI 156 (330)
T ss_dssp TEEEETTSCCEEEEEEECC--------CEEEEECTTSGGGGCCGGGCCGGGGTTEEEEEEEGGGCSSHHHHHHHHHHHHH
T ss_pred eEEEcCCCCceEEEEEECC-----CCCeeEEEeccCChhhhCCHhhCCHhHhccCCEEEEechhhcCcchHHHHHHHHHH
Confidence 886 467899998887763 3455 34443 3455668888877666677777777542 234567778887
Q ss_pred hhhhhcccccceEEEecCCCccCCCCC-ChhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeCC
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPL-KESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNGR 208 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~-~~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G~ 208 (353)
++. .+...++||+.+...|... ..+.+.++++++|++++|++|+..+ +.+++ .+++.||||+|+
T Consensus 157 a~~-----~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvT~G~ 231 (330)
T 3iq0_A 157 VKA-----NGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEEGVKEVIVKRGN 231 (330)
T ss_dssp HHH-----TTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSCSSHHHHHHHHHHHTCSEEEEECGG
T ss_pred HHH-----cCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEEeCC
Confidence 775 5666788887654322211 1234567889999999999999887 23332 257899999999
Q ss_pred CceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHHHh
Q 038564 209 EGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQRVKD 286 (353)
Q Consensus 209 ~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~~~~ 286 (353)
+|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|. +..+.++++++++
T Consensus 232 ~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~~~ 311 (330)
T 3iq0_A 232 QGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDAHRALQYANACGALAVTRRGPMEGTSRLMEIETFIQ 311 (330)
T ss_dssp GCEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSCSSSTTCCCHHHHHHHHH
T ss_pred CceEEEECCceEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCCCCHHHHHHHHH
Confidence 99999998899999999999999999999999999999999999999999999999999999996 4567899999987
Q ss_pred Hhh
Q 038564 287 EVQ 289 (353)
Q Consensus 287 ~i~ 289 (353)
+..
T Consensus 312 ~~~ 314 (330)
T 3iq0_A 312 RHD 314 (330)
T ss_dssp HC-
T ss_pred hcc
Confidence 653
No 3
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=1.7e-40 Score=308.40 Aligned_cols=264 Identities=19% Similarity=0.215 Sum_probs=218.5
Q ss_pred CcccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cc
Q 038564 6 SNHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ET 64 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~v 64 (353)
|+++|+|+|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+| +|
T Consensus 1 M~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~~gv 80 (299)
T 3ikh_A 1 MSLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPL 80 (299)
T ss_dssp -CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGGSSC
T ss_pred CCceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHHcCC
Confidence 468999999999999976432 456899999999999999999999999999999776 38
Q ss_pred ccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCC--ccccccceeeecCCCcHHHHHHHHHHhhh
Q 038564 65 SYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPD--GKFDYGMAVGVGGEILPETLEKMLEICNV 142 (353)
Q Consensus 65 d~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 142 (353)
+++++..++.+|+.+++.++. +++++++...+++..+++++++. ..+..++++++.++.+.+.+.++++.++.
T Consensus 81 ~~~~v~~~~~~T~~~~~~~~~-----~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a~~ 155 (299)
T 3ikh_A 81 MLLPDGHFNQHSDTSIILNSA-----DGDNAIITTTAAADTFSLDEMIPHMADAVAGDILLQQGNFSLDKTRALFQYARS 155 (299)
T ss_dssp EEESSSCCSSCCEEEEEECSS-----SCSCEEEEECHHHHHCCHHHHGGGGTTCCTTCEEEECSCSCHHHHHHHHHHHHH
T ss_pred ceeeeEecCCCCcEEEEEEcC-----CCCeEEEEeCCccccCCHHHHHHHHhhhccCCEEEECCCCCHHHHHHHHHHHHH
Confidence 888876667789988888763 45667766667666777776653 24567788999988889999999988876
Q ss_pred hhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCCHHHHhccCeEEEeeCCCceEEEEcCceEEE
Q 038564 143 VLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMDVEEVRKLCCVVVTNGREGSEVYYRDGKVKV 222 (353)
Q Consensus 143 v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~~~~~~~~~~vvvT~G~~Ga~~~~~~~~~~~ 222 (353)
.+...++||.... +.+.++++++|++++|++|++.+.. .+++.|+||+|++|++++++++.+++
T Consensus 156 -----~g~~v~~D~~~~~--------~~~~~ll~~~dil~~N~~E~~~l~g---~g~~~vvvt~G~~G~~~~~~~~~~~~ 219 (299)
T 3ikh_A 156 -----RGMTTVFNPSPVN--------PDFCHLWPLIDIAVVNESEAELLQP---YGVKTLVITQGAAGAWLVQEGQRQFC 219 (299)
T ss_dssp -----TTCEEEECCCSCC--------GGGGGCGGGCSEEEEEHHHHHHHCC---CSCSEEEEECGGGCEEEECSSCEEEE
T ss_pred -----cCCEEEEccccch--------hhHHHHHhhCCEEEecHHHHHHHhc---CCCCEEEEEECCCceEEEeCCceEEe
Confidence 5666778876431 2456788999999999999976532 56889999999999999988889999
Q ss_pred cCccccccCCCCCchHHHH-HHHHHHHcCCCHHH-HHHHHHHHHHHHhcccCCC--CCCHHHHHHHHhHhhh
Q 038564 223 SPFLANQIDPTGAGDSFLG-GLVTGLVQGLAVPD-AALLGNFFGSITVAQIGLP--KFDSRVLQRVKDEVQR 290 (353)
Q Consensus 223 pa~~v~~vDttGAGDaF~a-gfl~~l~~g~~~~~-Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~~~~~i~~ 290 (353)
|+++++++|||||||+|+| ||+++|++|+++++ |+++|+++|+++|++.|.. ..+.+++++++++...
T Consensus 220 ~~~~v~vvDttGAGDaf~a~~~~~~l~~g~~~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~~ 291 (299)
T 3ikh_A 220 PAVPAEALDTTGAGDTFLAVMLASALLRGVAPDALALAHASRAAAITVSRRGTLSAFPGSRELAALLTTDGA 291 (299)
T ss_dssp CCCCCCCSCCTTHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHSSSSTTTSCCHHHHHHHHC----
T ss_pred CCCCCccCCCCCchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCcccccCCCHHHHHHHHHhccc
Confidence 9999999999999999999 99999999999999 9999999999999999952 3568999999877643
No 4
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=1.1e-39 Score=308.98 Aligned_cols=280 Identities=13% Similarity=0.079 Sum_probs=220.1
Q ss_pred CcccEEEEccceeeeeeccC------cccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cccccee
Q 038564 6 SNHGILIVGNYCHDVLIRNG------TVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRPI 69 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~v 69 (353)
||++|+|+|++++|++.... ......+||++.|+|++|++||.++.++|.+|+|.+| +|+++++
T Consensus 1 m~~~v~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~gv~~~~v 80 (346)
T 3ktn_A 1 MSLKIAAFGEVMLRFTPPEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWV 80 (346)
T ss_dssp -CCEEEEECCCEEEEECSTTCCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCCcEEEeChhhhhhcCCCCCcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHcCCcceEE
Confidence 47899999999999997542 2567899999999999999999999999999999876 3899888
Q ss_pred ecCCCCCeEEEEEecccCCCCCCccEEEee----cCCCCCCCCCCCC-CccccccceeeecCCC------cHHHHHHHHH
Q 038564 70 IVPTSKTTVFHAYFDSISAPSGHADRVLKR----VCSCEPITPSDLP-DGKFDYGMAVGVGGEI------LPETLEKMLE 138 (353)
Q Consensus 70 ~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~----~~a~~~l~~~~l~-~~~~~~~~~~~~~~~~------~~~~~~~~~~ 138 (353)
...+.+|+.+++..+. +++++++.+ .++...+++++++ ...+...+++++++.. ..+.+.++++
T Consensus 81 ~~~~~~t~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~ 155 (346)
T 3ktn_A 81 GEKGDHIGSFFAEMGY-----GIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAEVDMVHICGISLSLTEKTRDAALILAQ 155 (346)
T ss_dssp EECCSCCEEEEEECCB-----TTBCCEEEECCCTTSTTTTCCGGGSCHHHHHTTCSEEEECTHHHHHCHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEecC-----CCCCceEEecCCCCChhhhCChhhcChHHHhCCCCEEEEeCccccCCHHHHHHHHHHHH
Confidence 7666788888776542 334444443 3456678887776 3345667788876432 2267788888
Q ss_pred HhhhhhcccccceEEEecCCCccCCCC----CChhhhhhcCCcccEeecCHHHHccC---C----------HHHH-----
Q 038564 139 ICNVVLVDIQSVIRVFDSVDGTVNPVP----LKESGFYHLLPKIGFLKASSEEALFM---D----------VEEV----- 196 (353)
Q Consensus 139 ~a~~v~~D~~g~~~~~d~~~~~~~~~~----~~~~~~~~~l~~~dvl~~n~~Ea~~l---~----------~~~~----- 196 (353)
.++. .+...++||+.+...|.. ...+.+.++++++|++++|++|+..+ . .+++
T Consensus 156 ~a~~-----~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~ 230 (346)
T 3ktn_A 156 KAHA-----YQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFM 230 (346)
T ss_dssp HHHH-----TTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHH
T ss_pred HHHH-----cCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHH
Confidence 8875 566778888766543331 11245778899999999999999875 1 1111
Q ss_pred --hccCeEEEeeCCCc-------eEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 038564 197 --RKLCCVVVTNGREG-------SEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSIT 267 (353)
Q Consensus 197 --~~~~~vvvT~G~~G-------a~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~ 267 (353)
.+++.||||+|++| ++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++
T Consensus 231 ~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~A~a~aa~~ 310 (346)
T 3ktn_A 231 SQYNLEWFAGTTRSHSQNQNYLSGYLYTQNEYQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLA 310 (346)
T ss_dssp HHHTCSEEEEEEEEECSSCEEEEEEEECSSCEEECCCEECCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEecCccccccCcceEEEEECCceEEeCCCccccCCCCchhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 15789999999998 989888889999999999999999999999999999999999999999999999999
Q ss_pred hcccCC-CCCCHHHHHHHHhHhhheeecc
Q 038564 268 VAQIGL-PKFDSRVLQRVKDEVQRRKLSC 295 (353)
Q Consensus 268 v~~~G~-~~~~~~~~~~~~~~i~~~~~~~ 295 (353)
|++.|. +..+.+++++++++-...+.+.
T Consensus 311 v~~~G~~~~p~~~ev~~~l~~~~~~~~~~ 339 (346)
T 3ktn_A 311 HTIQGDIPLTTVKQVNHVLEHPNIDLIRE 339 (346)
T ss_dssp TTSSSSCCCCCHHHHHHHHHCTTCCCCCC
T ss_pred hccCCCCCCCCHHHHHHHHhcCCceEeec
Confidence 999995 4567899999998766554443
No 5
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=5.1e-39 Score=298.76 Aligned_cols=268 Identities=20% Similarity=0.235 Sum_probs=214.4
Q ss_pred CCCCCCcccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC------
Q 038564 1 MVRNHSNHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE------ 63 (353)
Q Consensus 1 m~~~~~~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~------ 63 (353)
|.++ |++|+++|++++|++...++ .....+||+++|+|+++++||.++.++|.+|+|..|+
T Consensus 1 ~~~~--m~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l 78 (302)
T 2c4e_A 1 MGGK--MEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYL 78 (302)
T ss_dssp -CCC--EEEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHH
T ss_pred CCCC--cCcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHH
Confidence 5555 45899999999999975421 3567899999999999999999999999999999984
Q ss_pred ----cccceee-cCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHH
Q 038564 64 ----TSYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLE 138 (353)
Q Consensus 64 ----vd~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (353)
|+++++. .++.+|+.+++.++. +++++++.+.+++..+++++++. ...+++++.++.+ +.+.++++
T Consensus 79 ~~~gv~~~~~~~~~~~~T~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~-~~~~~~~~ 149 (302)
T 2c4e_A 79 KNLDINISKLYYSEEEETPKAWIFTDK-----DNNQITFFLWGAAKHYKELNPPN---FNTEIVHIATGDP-EFNLKCAK 149 (302)
T ss_dssp HHTTCBCTTCEECSSSCCCEEEEEECS-----SCCEECCEECGGGGGGGGCCCCC---CCEEEEEECSSCH-HHHHHHHH
T ss_pred HHcCCcccceEeeCCCCCceEEEEECC-----CCCEEEEEeCChhhhCCHhhcCc---ccCCEEEEeCCCc-HHHHHHHH
Confidence 8888775 466789998888753 34566555666766788877765 4567788876654 88888888
Q ss_pred HhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCCH------HHHh-ccCeEEEeeCCCce
Q 038564 139 ICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMDV------EEVR-KLCCVVVTNGREGS 211 (353)
Q Consensus 139 ~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~~------~~~~-~~~~vvvT~G~~Ga 211 (353)
.++. .+ ..++||+.+... ...+.+.++++++|++++|++|+..+.. ..+. ..+.||||+|++|+
T Consensus 150 ~a~~-----~g-~v~~D~~~~~~~---~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~l~~~~~~vvvt~G~~G~ 220 (302)
T 2c4e_A 150 KAYG-----NN-LVSFDPGQDLPQ---YSKEMLLEIIEHTNFLFMNKHEFERASNLLNFEIDDYLERVDALIVTKGSKGS 220 (302)
T ss_dssp HHBT-----TB-EEEECCGGGGGG---CCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCCHHHHHTTCSEEEEECGGGCE
T ss_pred HHHh-----cC-CEEEeCchhhhh---hhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCccHHHHHhcCCEEEEEECCCce
Confidence 8875 45 677887643211 1234567788999999999999987621 1221 26899999999999
Q ss_pred EEEEcCceEEEcCcccc-ccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHHHhHh
Q 038564 212 EVYYRDGKVKVSPFLAN-QIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQRVKDEV 288 (353)
Q Consensus 212 ~~~~~~~~~~~pa~~v~-~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~~~~~i 288 (353)
+++++++.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|+++|++++++.|. ...+.+++++++++.
T Consensus 221 ~~~~~~~~~~~~~~~v~~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~~~~~ 300 (302)
T 2c4e_A 221 VIYTKDKKIEIPCIKAGKVIDPTGAGDSYRAGFLSAYVKGYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEKH 300 (302)
T ss_dssp EEECSSCEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHHHHHC
T ss_pred EEEeCCcEEEeCCccCCcCCcCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccccccccCCCHHHHHHHHHhc
Confidence 99988888999999998 999999999999999999999999999999999999999999995 345688888887653
No 6
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.7e-39 Score=304.33 Aligned_cols=275 Identities=17% Similarity=0.151 Sum_probs=217.0
Q ss_pred CCCCCCcccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC------
Q 038564 1 MVRNHSNHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE------ 63 (353)
Q Consensus 1 m~~~~~~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~------ 63 (353)
|.+..++++|+++|++++|++...+. .....+||+++|+|++|++||.++.++|.+|+|.+|+
T Consensus 23 m~~~~~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L 102 (343)
T 2rbc_A 23 MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDL 102 (343)
T ss_dssp -----CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHH
T ss_pred ccccccCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHH
Confidence 56666677999999999999975431 3457899999999999999999999999999998773
Q ss_pred ----cccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHH
Q 038564 64 ----TSYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLE 138 (353)
Q Consensus 64 ----vd~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (353)
||++++.. ++.+|+.+++.++. ++++.++...+++..++++++....+...+++++++.. ++.+.++++
T Consensus 103 ~~~GVd~~~v~~~~~~~T~~~~v~~~~-----~g~r~~~~~~~~~~~~~~~~l~~~~l~~~~~v~~~~~~-~~~~~~~~~ 176 (343)
T 2rbc_A 103 SESGIDTSGMTVAPGARSALSTIIIDN-----RGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRW-PELALDVLT 176 (343)
T ss_dssp HHTTEECTTCEEETTCCCEEEEEEECT-----TSCEEEEEECCGGGGSSCCCCCHHHHTTCSEEEECSSS-HHHHHHHHH
T ss_pred HHcCCceeeEEEcCCCCCceEEEEECC-----CCCEEEEEcCCCcccCChhHhcHhhhCCCCEEEEcCCC-HHHHHHHHH
Confidence 88888764 66789988888763 45666666666666677777764456667888887654 467777887
Q ss_pred HhhhhhcccccceEEEecCCCccCCCCCChhhhhh-cCCcccEeecCHHHHccC----CHHHH------hcc-CeEEEee
Q 038564 139 ICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYH-LLPKIGFLKASSEEALFM----DVEEV------RKL-CCVVVTN 206 (353)
Q Consensus 139 ~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~-~l~~~dvl~~n~~Ea~~l----~~~~~------~~~-~~vvvT~ 206 (353)
.++. .+...++||... .+.+.+ +++++|++++|++|+..+ +++++ .+. +.||||+
T Consensus 177 ~a~~-----~g~~v~~Dp~~~--------~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~l~~~g~~~~VvvT~ 243 (343)
T 2rbc_A 177 VARA-----LGKPAILDGDVA--------PVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTA 243 (343)
T ss_dssp HHHH-----TTCCEEEEECSC--------CHHHHHHHGGGCSEEEEEHHHHHHHHCCSSHHHHHHHHHHHSTTSEEEEEC
T ss_pred HHHH-----CCCEEEEECCcc--------ccccHHHHHhcCCEEEeCHHHHHHHcCCCCHHHHHHHHHHhCCCceEEEEE
Confidence 7765 455567776421 234566 889999999999999875 33332 246 8999999
Q ss_pred CCCceEEEEcC--ceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHH
Q 038564 207 GREGSEVYYRD--GKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQ 282 (353)
Q Consensus 207 G~~Ga~~~~~~--~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~ 282 (353)
|++|+++++++ +.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.. ..+.++++
T Consensus 244 G~~G~~~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 323 (343)
T 2rbc_A 244 GPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETE 323 (343)
T ss_dssp GGGCEEEECTTCCCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSGGGGCCCHHHHH
T ss_pred CCcceEEEeCCCceeEEecCCCCccccCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHHH
Confidence 99999999887 788999999999999999999999999999999999999999999999999999953 46789999
Q ss_pred HHHhHhhheeec
Q 038564 283 RVKDEVQRRKLS 294 (353)
Q Consensus 283 ~~~~~i~~~~~~ 294 (353)
+++++...++..
T Consensus 324 ~~l~~~~~~~~~ 335 (343)
T 2rbc_A 324 EAMRQWLERESE 335 (343)
T ss_dssp HHHHHHHTCC--
T ss_pred HHHHhccccCCC
Confidence 999887666554
No 7
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=4.7e-39 Score=301.13 Aligned_cols=276 Identities=18% Similarity=0.167 Sum_probs=211.7
Q ss_pred CCCCCCcccEEEEccceeeeeeccCc-------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------C
Q 038564 1 MVRNHSNHGILIVGNYCHDVLIRNGT-------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------E 63 (353)
Q Consensus 1 m~~~~~~~~ilviG~~~iD~~~~~~~-------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~ 63 (353)
|++..++++|+++|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+| +
T Consensus 2 m~~~~~~~~v~~iG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~~g 81 (319)
T 3pl2_A 2 MTNLTSTHEVLAIGRLGVDIYPLQSGVGLADVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAELERLG 81 (319)
T ss_dssp -----CCCSEEEESCCEEEECBSSSSCCGGGCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTT
T ss_pred ccccccCCCEEEEChhheeeecccCCCCccccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcC
Confidence 67766678999999999999987542 356899999999999999999999999999999877 3
Q ss_pred cccceee-cCCCCCeEEEEEecccCCCCCCccEEEee--cCC-CCCCCCCCCCCccccccceeeecC-----CCcHHHHH
Q 038564 64 TSYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKR--VCS-CEPITPSDLPDGKFDYGMAVGVGG-----EILPETLE 134 (353)
Q Consensus 64 vd~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~--~~a-~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~ 134 (353)
|+++++. .++.+|+.+++.++. ++++.++.+ .++ ...+++++++...+..++++++.+ +...+.+.
T Consensus 82 v~~~~v~~~~~~~t~~~~~~~~~-----~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 156 (319)
T 3pl2_A 82 VDNQYVATDQTFKTPVTFCEIFP-----PDDFPLYFYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHR 156 (319)
T ss_dssp EECTTEEEESSSCCCEEEECCBT-----TTBCCEEEECCSCCGGGGCCGGGSCHHHHHHCSEEEEEGGGGSSTTHHHHHH
T ss_pred CccccEEecCCCCceEEEEEEcC-----CCCeeEEEecCCCcccccCChhhCCHHHhccCCEEEEecccccCchhHHHHH
Confidence 8888885 577789988776653 344444333 334 456777777655566667777643 33445566
Q ss_pred HHHHHhhhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeE
Q 038564 135 KMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCV 202 (353)
Q Consensus 135 ~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~v 202 (353)
.+++.++. +...++|++.+...|.... .+.+.++++++|++++|++|+..+ +.+++ .+++.|
T Consensus 157 ~~~~~~~~------~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~v 230 (319)
T 3pl2_A 157 EILTTRAN------RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGETEPERAGRALLERGVELA 230 (319)
T ss_dssp HHHHHHTT------CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSCCSHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHH------CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCCCCHHHHHHHHHhcCCCEE
Confidence 66666653 2334788877654443221 345678899999999999999876 33332 247899
Q ss_pred EEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHH
Q 038564 203 VVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRV 280 (353)
Q Consensus 203 vvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~ 280 (353)
+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|. ...+.++
T Consensus 231 vvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~e 310 (319)
T 3pl2_A 231 IVKQGPKGVMAMTKDETVEVPPFFVDVINGLGAGDAFGGALCHGLLSEWPLEKVLRFANTAGALVASRLECSTAMPTTDE 310 (319)
T ss_dssp EEEEETTEEEEECSSCEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSCSGGGCCCHHH
T ss_pred EEEECCCCeEEEECCceEEeCCcccCCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccCCcCCCCCHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999994 3456788
Q ss_pred HHHHHhH
Q 038564 281 LQRVKDE 287 (353)
Q Consensus 281 ~~~~~~~ 287 (353)
+++++++
T Consensus 311 v~~~l~~ 317 (319)
T 3pl2_A 311 VEASLNQ 317 (319)
T ss_dssp HHHHCC-
T ss_pred HHHHHhc
Confidence 8887653
No 8
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=1.5e-39 Score=307.00 Aligned_cols=275 Identities=17% Similarity=0.176 Sum_probs=205.3
Q ss_pred CcccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------ccccee
Q 038564 6 SNHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TSYRPI 69 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd~~~v 69 (353)
++++|+|+|++++|++...+. .+...+||++.|+|++|++||.++.++|.+|+|.+|+ |+++++
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~~gV~~~~v 82 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLVKKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGI 82 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCSSTTSCCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHHHTCBCTTC
T ss_pred CCCCEEEEChhhhheeccCCCCccchhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHHcCCCceeE
Confidence 457899999999999987653 5677999999999999999999999999999998773 899888
Q ss_pred ec-CCCCCeEEEEEecccCCCCCCccEEEee--cCCCCCCCCCCCCCccccccceeeecC-----CCcHHHHHHHHHHhh
Q 038564 70 IV-PTSKTTVFHAYFDSISAPSGHADRVLKR--VCSCEPITPSDLPDGKFDYGMAVGVGG-----EILPETLEKMLEICN 141 (353)
Q Consensus 70 ~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~ 141 (353)
.. ++.+|+.+++.++. ++++.+..+ .+++..+++++++...+...+++++.+ +.+.+.+.++++.++
T Consensus 83 ~~~~~~~T~~~~v~~~~-----~g~r~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~ 157 (338)
T 3ljs_A 83 VRTSTAKTALAFVALDA-----HGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQ 157 (338)
T ss_dssp EEESSSCCCEEEEECCS-----TTCCEEEEECSSCGGGGCCGGGCCHHHHHTEEEEEEEGGGGSSHHHHHHHHHHHHHHH
T ss_pred EEcCCCCceEEEEEECC-----CCCeEEEEeCCCChhHhCCHhhcCHhHhcCCCEEEECChHhcCchHHHHHHHHHHHHH
Confidence 64 67889998888763 345554332 456667888888764455566666542 334577888888887
Q ss_pred hhhcccccceEEEecCCCccCCCC--CChhhhhhcCCcccEeecCHHHHccCC----HHH--H------hccCeEEEeeC
Q 038564 142 VVLVDIQSVIRVFDSVDGTVNPVP--LKESGFYHLLPKIGFLKASSEEALFMD----VEE--V------RKLCCVVVTNG 207 (353)
Q Consensus 142 ~v~~D~~g~~~~~d~~~~~~~~~~--~~~~~~~~~l~~~dvl~~n~~Ea~~l~----~~~--~------~~~~~vvvT~G 207 (353)
. .+...+|||+.+...|.. ...+.+.++++++|++++|++|++.+. .++ + .+++.||||+|
T Consensus 158 ~-----~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvT~G 232 (338)
T 3ljs_A 158 A-----AGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDA 232 (338)
T ss_dssp H-----TTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCHHHHHHHHTTTTCCEEEEEET
T ss_pred H-----cCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhHHHHHHHHHhcCCCEEEEeeC
Confidence 6 566778898876544432 223456788899999999999998762 111 2 24689999999
Q ss_pred CCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcC--------------CCHHHHHHHHHHHHHHHhcccCC
Q 038564 208 REGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQG--------------LAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 208 ~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g--------------~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
++|++++++++.+++|+++++++|||||||+|+|||+++|++| +++++|+++|+++|+++|++.|.
T Consensus 233 ~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~a~~~~~l~~g~~~~~~~~~~~~~~~~l~~al~~A~~~aa~~v~~~Ga 312 (338)
T 3ljs_A 233 AGPVHWYTRTAGGEVPTFRVQVQDSNAAGDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAVTRQGA 312 (338)
T ss_dssp TEEEEEEESSCEEEECC-----------CHHHHHHHHHHHHHHCSSTHHHHHHHTCHHHHHHHHHHHHHHHGGGC----C
T ss_pred CCceEEEECCceEEeCCCCCccCCCCCccHHHHHHHHHHHHhCCCcccchhccccChHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999998999999999999999999999999999999999 89999999999999999999995
Q ss_pred -C-CCCHHHHHHHHhHhhh
Q 038564 274 -P-KFDSRVLQRVKDEVQR 290 (353)
Q Consensus 274 -~-~~~~~~~~~~~~~i~~ 290 (353)
+ ..+.+++++++.+...
T Consensus 313 ~~~~p~~~ev~~~~~~~~~ 331 (338)
T 3ljs_A 313 FTAMPMLSEVLSLIQEQSE 331 (338)
T ss_dssp CCCTTHHHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHhhhcc
Confidence 3 3568999999987643
No 9
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=5.5e-39 Score=298.56 Aligned_cols=260 Identities=19% Similarity=0.221 Sum_probs=213.8
Q ss_pred CcccEEEEccceeeeeeccC------------cccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------
Q 038564 6 SNHGILIVGNYCHDVLIRNG------------TVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE---------- 63 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~------------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~---------- 63 (353)
||++|+|+|++++|++...+ ......+||++.|+|.+|++||.++.++|.+|+|.+|+
T Consensus 1 Mm~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~g 80 (304)
T 3ry7_A 1 MTNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKVAH 80 (304)
T ss_dssp -CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHHTT
T ss_pred CCCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcC
Confidence 47899999999999997532 13567899999999999999999999999999999883
Q ss_pred cccceee-cCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc--cccccceeeecCCCcHHHHHHHHHHh
Q 038564 64 TSYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG--KFDYGMAVGVGGEILPETLEKMLEIC 140 (353)
Q Consensus 64 vd~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (353)
|+++++. .++.+|+.+++.++. +++++++...+++..+++++++.. .+...+++++.++.+.+.+.++++.+
T Consensus 81 v~~~~v~~~~~~~T~~~~~~~~~-----~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 155 (304)
T 3ry7_A 81 IDTSYIIKTAEAKTGQAFITVNA-----EGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIA 155 (304)
T ss_dssp CBCTTCEEESSSCCEEEEEEECS-----SCCEEEEEECGGGGGCCHHHHHTTHHHHHTCSEEEEETTSCHHHHHHHHHHH
T ss_pred CcchhEEEcCCCCCcEEEEEECC-----CCCEEEEEecCchhcCCHHHHHHHHHHhccCCEEEEcCCCCHHHHHHHHHHH
Confidence 8888885 477899998888864 456667777777777887776542 35677888888888999999999988
Q ss_pred hhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC------CHHH---H------hccCeEEEe
Q 038564 141 NVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM------DVEE---V------RKLCCVVVT 205 (353)
Q Consensus 141 ~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l------~~~~---~------~~~~~vvvT 205 (353)
+. .+...++||.... +.+.++++++|++++|++|+..+ +.++ + .+.+.|+||
T Consensus 156 ~~-----~~~~v~~D~~~~~--------~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 222 (304)
T 3ry7_A 156 KA-----HGVTTVLNPAPAK--------ALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLIT 222 (304)
T ss_dssp HH-----TTCEEEEECCSCC--------CCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HH-----cCCEEEEeCCccc--------cccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEE
Confidence 76 4566778875421 13456889999999999999876 1121 1 246899999
Q ss_pred eCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHH
Q 038564 206 NGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQG-LAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQ 282 (353)
Q Consensus 206 ~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g-~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~ 282 (353)
+|++|++++++++.+++|+++++++|||||||+|+|||+++|++| +++++|+++|+++|+++|++.|. ...+.++++
T Consensus 223 ~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~~~ev~ 302 (304)
T 3ry7_A 223 LGKQGTYFATKNQSQHIEAYKVNAIDTTAAGDTFIGAFVSRLNKSQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVN 302 (304)
T ss_dssp CGGGCEEEECSSCEEEECCSSCCSSCCSSHHHHHHHHHHHHCCTTCTTHHHHHHHHHHHHHTTSCCCCTGGGCCCHHHHH
T ss_pred eCCCceEEEECCeeEEecCCCcccCCCCCchHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCccccCCCHHHHh
Confidence 999999999988899999999999999999999999999999999 99999999999999999999995 235677776
Q ss_pred H
Q 038564 283 R 283 (353)
Q Consensus 283 ~ 283 (353)
+
T Consensus 303 ~ 303 (304)
T 3ry7_A 303 Q 303 (304)
T ss_dssp T
T ss_pred h
Confidence 4
No 10
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=6.4e-40 Score=308.24 Aligned_cols=275 Identities=19% Similarity=0.223 Sum_probs=195.2
Q ss_pred CCCCCCcccEEEEccceeeeeeccCc-------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------C
Q 038564 1 MVRNHSNHGILIVGNYCHDVLIRNGT-------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------E 63 (353)
Q Consensus 1 m~~~~~~~~ilviG~~~iD~~~~~~~-------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~ 63 (353)
|....+|++|+|+|++++|++...+. .....+||++.|+|+++++||.++.++|.+|+|.+| +
T Consensus 15 ~~~~~~~~~v~viG~~~~D~~~~~~~~p~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~g 94 (327)
T 3hj6_A 15 FSLSKGDLDVVSLGEILVDMISTEEVNSLSQSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGNYLLDVLKGEQ 94 (327)
T ss_dssp -------CCEEEESCCEEEEECCCCCSSGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHHHHHHHHHHTT
T ss_pred cccccCCCCEEEEccceEEEeccCCCCCccccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHHHHHHHHHHcC
Confidence 34456678999999999999987652 567899999999999999999999999999999877 3
Q ss_pred cccceee-cCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecC-----CCcHHHHHHHH
Q 038564 64 TSYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGG-----EILPETLEKML 137 (353)
Q Consensus 64 vd~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 137 (353)
|+++++. .++.+|+.+++..+ .+++.++...+++..++++++....+...+++++.+ +.+.+.+.+++
T Consensus 95 v~~~~v~~~~~~~t~~~~v~~~------~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~l~~~~~~~~~~~~~ 168 (327)
T 3hj6_A 95 IITDGIQQDKERRTTIVYVSKS------TRTPDWLPYREADMYLQEDDIIFELIKRSKVFHLSTFILSRKPARDTAIKAF 168 (327)
T ss_dssp CBCTTCEEESSSCCCEEEECCC------TTCCCEEEECSGGGGCCSCCCHHHHHC--CEEEEESHHHHSHHHHHHHHHHH
T ss_pred CCcccEEEcCCCCceEEEEEec------CCCccEEEecChhhhCChhhcCHhHhccCCEEEECchHhcCchhHHHHHHHH
Confidence 8888886 56778887665432 345556666677777777776654556667777654 33557788888
Q ss_pred HHhhhhhcccccceEEEecCCCccCCCCC--ChhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEe
Q 038564 138 EICNVVLVDIQSVIRVFDSVDGTVNPVPL--KESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVT 205 (353)
Q Consensus 138 ~~a~~v~~D~~g~~~~~d~~~~~~~~~~~--~~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT 205 (353)
+.++. .+...++||+.+...|... ..+.+.++++++|++++|++|+..+ +.+++ .+++.||||
T Consensus 169 ~~a~~-----~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt 243 (327)
T 3hj6_A 169 NYARE-----QGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGPDSPENYVKRYLELGVKAVILT 243 (327)
T ss_dssp HHHHH-----TTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTTSCSSGGGGGGTTTTCSEEEEE
T ss_pred HHHHH-----CCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHhCCCCEEEEE
Confidence 88876 5667788887655433321 1345678899999999999999865 22222 246899999
Q ss_pred eCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHH
Q 038564 206 NGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQR 283 (353)
Q Consensus 206 ~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~ 283 (353)
+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|. +..+.+++++
T Consensus 244 ~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~ 323 (327)
T 3hj6_A 244 LGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGFICGLLDGYTVKRSIKLGNGVAAFKIRGVGALSPVPSKEDIIK 323 (327)
T ss_dssp CSTTCEEEECSSCEEESCSSTTC-----CCHHHHHHHHHHTTSSCSTTHHHHHHHHCCCSSCC-----------------
T ss_pred ECCCceEEEeCCeeEEcCCcccccCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999994 3455677777
Q ss_pred HHh
Q 038564 284 VKD 286 (353)
Q Consensus 284 ~~~ 286 (353)
+++
T Consensus 324 ~l~ 326 (327)
T 3hj6_A 324 EYN 326 (327)
T ss_dssp ---
T ss_pred Hhc
Confidence 664
No 11
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=2e-38 Score=297.74 Aligned_cols=276 Identities=16% Similarity=0.256 Sum_probs=209.1
Q ss_pred CcccEEEEccceeeeeeccC------------cccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------
Q 038564 6 SNHGILIVGNYCHDVLIRNG------------TVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE---------- 63 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~------------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~---------- 63 (353)
++++|+|+|++++|++..+. ......+||+++|+|++|++||.++.++|.+|+|.+|+
T Consensus 4 ~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~g 83 (325)
T 3h49_A 4 DNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKEN 83 (325)
T ss_dssp -CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHHT
T ss_pred CCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHHcC
Confidence 45889999999999974321 24567899999999999999999999999999998873
Q ss_pred cccceee-cCCCCCeEEEEEecccCCCCCCccEEEeecC-CCCCCCCCCCCCccccccceeeecC-----CCcHHHHHHH
Q 038564 64 TSYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVC-SCEPITPSDLPDGKFDYGMAVGVGG-----EILPETLEKM 136 (353)
Q Consensus 64 vd~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~ 136 (353)
|+++++. .++.+|+.+++.++. +++++++...+ +...+++++++...+...+++++.+ ..+.+.+.++
T Consensus 84 V~~~~v~~~~~~~T~~~~~~~~~-----~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 158 (325)
T 3h49_A 84 IDIQSLKQDVSIDTSINVGLVTE-----DGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEI 158 (325)
T ss_dssp CBCSSCEEETTSCCCEEEEEECT-----TSCEEEECCTTSHHHHCCGGGCCGGGGGGCSEEEEEEETTSTTSCHHHHHHH
T ss_pred CceeeEEecCCCCCceEEEEECC-----CCceeEEeccCcccccCChhhcChhhhccCCEEEEecccCCcccCHHHHHHH
Confidence 8998875 467789988888763 45666655443 3345677777655566667777653 2345778888
Q ss_pred HHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEee
Q 038564 137 LEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTN 206 (353)
Q Consensus 137 ~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~ 206 (353)
++.++. .+ ..++|++.+...+. ..+.+.++++++|++++|++|+..+ +.+++ .+++.||||+
T Consensus 159 ~~~a~~-----~~-~~~~d~~~~~~~~~--~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~ 230 (325)
T 3h49_A 159 FTQAKA-----RQ-MIICADMIKPRLNE--TLDDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKT 230 (325)
T ss_dssp HHHHHH-----TT-CEEEEEECCCSSCC--CHHHHHHHHTTCSEEECBHHHHHHHHTCSSHHHHHHHHHTTTCSEEEEEC
T ss_pred HHHHHh-----cC-CEEEecCCchhhhh--HHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEEe
Confidence 888875 34 35677655433221 2345678899999999999999876 33332 2478999999
Q ss_pred CCCceEEEEcCceEEEcCccc-cccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHH
Q 038564 207 GREGSEVYYRDGKVKVSPFLA-NQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQR 283 (353)
Q Consensus 207 G~~Ga~~~~~~~~~~~pa~~v-~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~ 283 (353)
|++|++++++++.+++|++++ +++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|. ...+.+++++
T Consensus 231 G~~G~~~~~~~~~~~~~~~~~~~vvDttGAGDaf~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 310 (325)
T 3h49_A 231 GKDGCFIKRGDMTMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQ 310 (325)
T ss_dssp TTSCEEEEETTEEEEECCCSSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSSSCSSSHHHHT
T ss_pred CCCCeEEEECCeEEEecCcCCCCCcCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Confidence 999999999888999999986 8999999999999999999999999999999999999999999994 2456789999
Q ss_pred HHhHhhheeec
Q 038564 284 VKDEVQRRKLS 294 (353)
Q Consensus 284 ~~~~i~~~~~~ 294 (353)
+++++..+-.+
T Consensus 311 ~l~~~~~~~~~ 321 (325)
T 3h49_A 311 LLEEYEGEGHH 321 (325)
T ss_dssp C----------
T ss_pred HHHhccCCccc
Confidence 98887654433
No 12
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=1.9e-38 Score=296.40 Aligned_cols=271 Identities=21% Similarity=0.254 Sum_probs=211.9
Q ss_pred cccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccceee
Q 038564 7 NHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRPII 70 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~v~ 70 (353)
|++|+|+|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+| +|+++++.
T Consensus 1 M~~v~viG~~~iD~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (313)
T 3ewm_A 1 MSLIASIGELLIDLISVEEGDLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIV 80 (313)
T ss_dssp -CEEEEESCCEEEEEESSSSCTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CCcEEEECceeeeeecCCCCCcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHHcCCCcccee
Confidence 57899999999999987643 456899999999999999999999999999999877 38998886
Q ss_pred -cCCCCCeEEEEEecccCCCCCCccEEEeecC-CCCCCCCCCCCCccccccceeeec-----CCCcHHHHHHHHHHhhhh
Q 038564 71 -VPTSKTTVFHAYFDSISAPSGHADRVLKRVC-SCEPITPSDLPDGKFDYGMAVGVG-----GEILPETLEKMLEICNVV 143 (353)
Q Consensus 71 -~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~-a~~~l~~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a~~v 143 (353)
.++.+|+.+++.++ ++++.++.+.+ +...+++++++...+...++++++ .+.+.+.+.++++.++.
T Consensus 81 ~~~~~~T~~~~~~~~------~g~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a~~- 153 (313)
T 3ewm_A 81 KDEKKHTGIVFVQLK------GASPSFLLYDDVAYFNMTLNDINWDIVEEAKIVNFGSVILARNPSRETVMKVIKKIKG- 153 (313)
T ss_dssp EESSSCCEEEEEECS------SSSCEEEECCSSGGGCCCGGGCCHHHHHHCSEEEEESGGGGSTTHHHHHHHHHHHHBT-
T ss_pred ecCCCCceEEEEEec------CCCcceEeeccCHHHhCChhhCCHHHhCCCCEEEEcCcccCCcchHHHHHHHHHHhcc-
Confidence 57789998877664 25566655555 446788887765444445555544 34566788888887762
Q ss_pred hcccccceEEEecCCCccCCCCCC---hhhhhhcCCcccEeecCHHHHccCCHHH--HhccCeEEEeeCCCceEEEEcCc
Q 038564 144 LVDIQSVIRVFDSVDGTVNPVPLK---ESGFYHLLPKIGFLKASSEEALFMDVEE--VRKLCCVVVTNGREGSEVYYRDG 218 (353)
Q Consensus 144 ~~D~~g~~~~~d~~~~~~~~~~~~---~~~~~~~l~~~dvl~~n~~Ea~~l~~~~--~~~~~~vvvT~G~~Ga~~~~~~~ 218 (353)
+...++||+.+...|.... .+.+.++++++|++++|++|++.+.... ..+...||||+|++|++++++++
T Consensus 154 -----~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~~~~~~~vviT~G~~G~~~~~~~~ 228 (313)
T 3ewm_A 154 -----SSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVEVKGSMLTAITLGPKGCRLIKNET 228 (313)
T ss_dssp -----TBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCCCCCSSEEEEECGGGEEEEEETTE
T ss_pred -----CCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCccccCceEEEEEECCCCeEEEECCe
Confidence 3556788876543332111 1345678889999999999987652111 11234589999999999999988
Q ss_pred eEEEcCccccccCCCCCchHHHHHHHHHHH--cCCCHHHHHHHHHHHHHHHhcccCC-CCCCHHHHHHHHhHhh
Q 038564 219 KVKVSPFLANQIDPTGAGDSFLGGLVTGLV--QGLAVPDAALLGNFFGSITVAQIGL-PKFDSRVLQRVKDEVQ 289 (353)
Q Consensus 219 ~~~~pa~~v~~vDttGAGDaF~agfl~~l~--~g~~~~~Al~~A~a~Aa~~v~~~G~-~~~~~~~~~~~~~~i~ 289 (353)
.+++|+++++++|||||||+|+|||+++|+ +|+++++|+++|+++|+++|++.|. +..+.+++++++++..
T Consensus 229 ~~~~~~~~v~vvDttGAGDaf~a~~~~~l~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~~p~~~ev~~~l~~~~ 302 (313)
T 3ewm_A 229 VVDVPSYNVNPLDTTGAGDAFMAALLVGILKLKGLDLLKLGKFANLVAALSTQKRGAWSTPRKDELLKYKEARE 302 (313)
T ss_dssp EEEEECCCCCCSCCTTHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHTTSCSSCCCCCHHHHTTSHHHHH
T ss_pred eEEcCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999999999999999999999996 4456888888887754
No 13
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=3.1e-38 Score=294.88 Aligned_cols=268 Identities=18% Similarity=0.200 Sum_probs=209.0
Q ss_pred cccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccceee
Q 038564 7 NHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRPII 70 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~v~ 70 (353)
|++|+|+|++++|++...+. .....+||++.|+|+++++||.++.++|.+|+|.+| +|+++++.
T Consensus 1 m~~v~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~~gv~~~~v~ 80 (313)
T 2v78_A 1 MVDVIALGEPLIQFNSFNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIK 80 (313)
T ss_dssp -CCEEEECCCEEEEEESSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHHTTCBCTTEE
T ss_pred CCeEEEECcceEEEecCCCCcccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHHcCCcCceEE
Confidence 35899999999999975432 456789999999999999999999999999999776 38888886
Q ss_pred c-CCCCCeEEEEE--ecccCCCCCCccEEEee--cCCCCCCCCCCCCCccccccceeeecC------CCcHHHHHHHHHH
Q 038564 71 V-PTSKTTVFHAY--FDSISAPSGHADRVLKR--VCSCEPITPSDLPDGKFDYGMAVGVGG------EILPETLEKMLEI 139 (353)
Q Consensus 71 ~-~~~~T~~~~~~--~~~~~~~~~~~~~~~~~--~~a~~~l~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 139 (353)
. ++.+|+.+++. ++. ++++++... .++...+++++++...+...+++++.+ +.+.+.+.++++.
T Consensus 81 ~~~~~~t~~~~~~~~~~~-----~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~ 155 (313)
T 2v78_A 81 VDNESFTGIYFIQRGYPI-----PMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFEL 155 (313)
T ss_dssp EETTSCCCEEEEEESSSS-----TTCEEEEEECTTCSGGGCCGGGCCHHHHHTSSEEEEEHHHHHHCHHHHHHHHHHHHH
T ss_pred EcCCCCceEEEEEEecCC-----CCCeeEEEeCCcChhHhCChhhCCHHHhcCCCEEEEcCchhhcChHHHHHHHHHHHH
Confidence 4 66789988877 653 344544332 356667888777654455667777753 2334667777777
Q ss_pred hhhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCccc--EeecCHHHHccC----CHHHH------hccCeEEEe
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIG--FLKASSEEALFM----DVEEV------RKLCCVVVT 205 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~d--vl~~n~~Ea~~l----~~~~~------~~~~~vvvT 205 (353)
++.. +|||+.+...|.... .+.+.++++++| ++++|++|++.+ +++++ .+++.||||
T Consensus 156 a~~~---------~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt 226 (313)
T 2v78_A 156 AKSR---------SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTDPDEAYRKYKELGVKVLLYK 226 (313)
T ss_dssp CSSE---------EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHh---------CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCCCCHHHHHHHHHhCCCCEEEEE
Confidence 7641 677766543222111 134567889999 999999999875 34332 246789999
Q ss_pred eCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHH
Q 038564 206 NGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQR 283 (353)
Q Consensus 206 ~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~ 283 (353)
+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.. ..+.+++++
T Consensus 227 ~G~~G~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~ 306 (313)
T 2v78_A 227 LGSKGAIAYKDNVKAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLEDAER 306 (313)
T ss_dssp CGGGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSTTCCCHHHHHH
T ss_pred ECCCCcEEeeCCcEEEeCCCcCCccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Confidence 999999999888889999999999999999999999999999999999999999999999999999953 357889999
Q ss_pred HHhHh
Q 038564 284 VKDEV 288 (353)
Q Consensus 284 ~~~~i 288 (353)
+++++
T Consensus 307 ~~~~~ 311 (313)
T 2v78_A 307 FLNEF 311 (313)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88775
No 14
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=2.4e-37 Score=290.67 Aligned_cols=271 Identities=19% Similarity=0.247 Sum_probs=212.5
Q ss_pred cEEEEccceeeeeecc----------C-----------cccccccCChHHHHHHHHHhCCCCeEEEEEecC-CCCC----
Q 038564 9 GILIVGNYCHDVLIRN----------G-----------TVLAETLGGAASFISNVLNGLSISCSLIAKVGH-DFKY---- 62 (353)
Q Consensus 9 ~ilviG~~~iD~~~~~----------~-----------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~-D~~g---- 62 (353)
+|+|+|++++|++... + ......+||++.|+|++|++||.++.++|.+|+ | .|
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~i~~ 80 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQPYLD 80 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHHHHH
T ss_pred cEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHHHHH
Confidence 7999999999999865 2 135668999999999999999999999999999 8 55
Q ss_pred -----Ccccceee-cCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHH
Q 038564 63 -----ETSYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKM 136 (353)
Q Consensus 63 -----~vd~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (353)
+||++++. .++.+|+.+++.++. ++.+.+....++...++++++... ...+++++++.. ++.+.++
T Consensus 81 ~L~~~gVd~~~v~~~~~~~T~~~~v~~~~-----~g~~~~~~~~ga~~~~~~~~~~~~--~~~~~v~~~~~~-~~~~~~~ 152 (326)
T 3b1n_A 81 RMDALGLSREYVRVLPDTYSAQAMITTDL-----DNNQITAFHPGAMMQSHVNHAGEA--KDIKLAIVGPDG-FQGMVQH 152 (326)
T ss_dssp HHHHHTCEEEEEEEETTCCCEEEEEEECT-----TCCCEEEEECGGGGGGGGSCGGGC--CSCSEEEECSCC-HHHHHHH
T ss_pred HHHHcCCcccceEEcCCCCceEEEEEECC-----CCceEEEEecChhhhcChhhcccc--cCCCEEEECCcc-HHHHHHH
Confidence 38888876 466789988888764 345555445566666666666442 556777776554 5777788
Q ss_pred HHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC------CHHHH-hccCeEEEeeCCC
Q 038564 137 LEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM------DVEEV-RKLCCVVVTNGRE 209 (353)
Q Consensus 137 ~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l------~~~~~-~~~~~vvvT~G~~ 209 (353)
++.++. .+...+|||+.+...+ ..+.+.++++++|++++|++|+..+ +.+++ .+++.||||+|++
T Consensus 153 ~~~a~~-----~g~~v~~D~~~~~~~~---~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~l~~~~~~vvvT~G~~ 224 (326)
T 3b1n_A 153 TEELAQ-----AGVPFIFDPGQGLPLF---DGATLRRSIELATYIAVNDYEAKLVCDKTGWSEDEIASRVQALIITRGEH 224 (326)
T ss_dssp HHHHHH-----HTCCEEECCGGGGGGC---CHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCCHHHHHTTSSEEEEECGGG
T ss_pred HHHHHH-----CCCEEEEeCchhhhhc---cHHHHHHHHHhCCEEecCHHHHHHHhCCCCCCHHHHHhcCCEEEEecCCC
Confidence 887774 3555677776543221 2345678889999999999999876 23333 3478999999999
Q ss_pred ceEEEEcCceEEEcCcccc-ccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHHHHh
Q 038564 210 GSEVYYRDGKVKVSPFLAN-QIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQRVKD 286 (353)
Q Consensus 210 Ga~~~~~~~~~~~pa~~v~-~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~~~~ 286 (353)
|++++++++.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.. ..+.++++++++
T Consensus 225 Ga~~~~~~~~~~~~~~~v~~vvDttGAGDaF~ag~l~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~ev~~~l~ 304 (326)
T 3b1n_A 225 GATIRHRDGTEQIPAVRAERVIDPTGCGDAFRGGLLYGIEHGFDWATAGRLASLMGALKIAHQGPQTYAPTRAEIDARFE 304 (326)
T ss_dssp CEEEEETTEEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSTTCCCCCHHHHHHHHH
T ss_pred ceEEEECCcEEEeCCCCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999998888999999987 6899999999999999999999999999999999999999999953 467899999988
Q ss_pred Hhhheeeccc
Q 038564 287 EVQRRKLSCS 296 (353)
Q Consensus 287 ~i~~~~~~~~ 296 (353)
+..-.+.+.|
T Consensus 305 ~~~~~~~~~~ 314 (326)
T 3b1n_A 305 TAFGYRPKGS 314 (326)
T ss_dssp HHHSSCCC--
T ss_pred HhcCCccccc
Confidence 7655554444
No 15
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=6.4e-38 Score=292.13 Aligned_cols=262 Identities=16% Similarity=0.206 Sum_probs=212.8
Q ss_pred cccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------cc
Q 038564 7 NHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TS 65 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd 65 (353)
|++|+|+|++++|++...++ .....+||++.|+|+++++||.++.++|.+|+|.+|+ |+
T Consensus 4 ~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~~gv~ 83 (309)
T 1rkd_A 4 AGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNID 83 (309)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHTTTEE
T ss_pred CCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHHcCCC
Confidence 56899999999999986421 3567899999999999999999999999999998873 88
Q ss_pred cceee-cCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc--cccccceeeecCCCcHHHHHHHHHHhhh
Q 038564 66 YRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG--KFDYGMAVGVGGEILPETLEKMLEICNV 142 (353)
Q Consensus 66 ~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 142 (353)
++++. .++.+|+.+++.++. +++++++...+++..+++++++.. .+..++++++.++.+.+.+.++++.++.
T Consensus 84 ~~~v~~~~~~~T~~~~~~~~~-----~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a~~ 158 (309)
T 1rkd_A 84 ITPVSVIKGESTGVALIFVNG-----EGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQ 158 (309)
T ss_dssp CTTEEEETTCCCEEEEEEECT-----TSCEEEEEECGGGGGCCHHHHHTTHHHHHHCSEEEECSSSCHHHHHHHHHHHHH
T ss_pred ccceEecCCCCCceEEEEECC-----CCCeEEEEeCCchhcCCHHHHHHHHHhcccCCEEEEeCCCCHHHHHHHHHHHHH
Confidence 88886 466789998888763 456666666777667777766542 3556788888888888888888888875
Q ss_pred hhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC---------HHHH------hccCeEEEeeC
Q 038564 143 VLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD---------VEEV------RKLCCVVVTNG 207 (353)
Q Consensus 143 v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~---------~~~~------~~~~~vvvT~G 207 (353)
.+...++||+.+. . ...++++++|++++|++|+..+. .+++ .+++.||||+|
T Consensus 159 -----~g~~v~~D~~~~~----~----~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 225 (309)
T 1rkd_A 159 -----NKTIVALNPAPAR----E----LPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLG 225 (309)
T ss_dssp -----TTCEEEECCCSCC----C----CCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECG
T ss_pred -----cCCEEEEECCccc----c----chHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEEC
Confidence 4556678876531 1 12357789999999999997651 1111 24689999999
Q ss_pred CCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHHHH
Q 038564 208 REGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQRVK 285 (353)
Q Consensus 208 ~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~~~ 285 (353)
++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|++++++.|.. ..+.+++++++
T Consensus 226 ~~G~~~~~~~~~~~~~~~~v~~vdt~GAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~~ 305 (309)
T 1rkd_A 226 SRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFL 305 (309)
T ss_dssp GGCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGGGCCCHHHHHHHH
T ss_pred CCcEEEEeCCceEEcCCCCCCcCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCCCccCCCCCHHHHHHHH
Confidence 9999999888889999999999999999999999999999999999999999999999999999952 45678888876
Q ss_pred h
Q 038564 286 D 286 (353)
Q Consensus 286 ~ 286 (353)
+
T Consensus 306 ~ 306 (309)
T 1rkd_A 306 D 306 (309)
T ss_dssp H
T ss_pred h
Confidence 5
No 16
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=3.2e-38 Score=297.80 Aligned_cols=269 Identities=19% Similarity=0.221 Sum_probs=201.0
Q ss_pred CcccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cccccee
Q 038564 6 SNHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRPI 69 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~v 69 (353)
++++|+|+|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+| +|+++++
T Consensus 25 ~~~~vlviG~~~iD~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~GV~~~~v 104 (336)
T 4du5_A 25 SALDVITFGEAMMLLVADRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHV 104 (336)
T ss_dssp -CEEEEEECCCEEEEEESSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCEEEEChhhhhccCCCCCccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceE
Confidence 347899999999999987653 457899999999999999999999999999999776 3899888
Q ss_pred e-cCCCCCeEEEEEecccCCCCCCccE-E-E-eecCCCCCCCCCCCCCccccccceeeecC------CCcHHHHHHHHHH
Q 038564 70 I-VPTSKTTVFHAYFDSISAPSGHADR-V-L-KRVCSCEPITPSDLPDGKFDYGMAVGVGG------EILPETLEKMLEI 139 (353)
Q Consensus 70 ~-~~~~~T~~~~~~~~~~~~~~~~~~~-~-~-~~~~a~~~l~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 139 (353)
. .++.+|+.+++.++. +++++ + + ...++...+++++++...+...+++++.+ +...+.+.++++.
T Consensus 105 ~~~~~~~T~~~~~~~~~-----~g~~~~~~~~~~~~a~~~l~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~~~ 179 (336)
T 4du5_A 105 VCDATQKTGFQFKGKVT-----DGSDPPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDL 179 (336)
T ss_dssp EECTTSCCCEEEECCCS-----CC--CCEEEECTTCTGGGCCGGGCCHHHHTTEEEEEEESSGGGSCTTHHHHHHHHHHH
T ss_pred EEcCCCCcEEEEEEEcC-----CCCcceEEEECCCChhHhCChhhCCHhHhccCCEEEEcCchhhCChHHHHHHHHHHHH
Confidence 5 466789988777653 33233 3 2 33567777888888765455556665543 3345677788887
Q ss_pred hhhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeC
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNG 207 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G 207 (353)
++. .+...++||+.+...|.... .+.+.++++++|++++|++|++.+ +.+++ .+.+.||||+|
T Consensus 180 a~~-----~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~~~~~~~~~~l~~~g~~~vvvt~G 254 (336)
T 4du5_A 180 MRA-----AGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGETTPEGVARFYRQLGAKLVVVKLG 254 (336)
T ss_dssp HHH-----TTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCCCSHHHHHHHHHHTTCSEEEEECG
T ss_pred HHH-----CCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCCCCHHHHHHHHHhcCCCEEEEEec
Confidence 775 56667888876654333211 234667889999999999999876 33332 24789999999
Q ss_pred CCceEEEEcCceEEEcCcccc-ccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHH
Q 038564 208 REGSEVYYRDGKVKVSPFLAN-QIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQRV 284 (353)
Q Consensus 208 ~~Ga~~~~~~~~~~~pa~~v~-~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~~ 284 (353)
++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|. ...+.++++++
T Consensus 255 ~~G~~~~~~~~~~~~~~~~v~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~ 334 (336)
T 4du5_A 255 AEGAYFDGEAGSGRVAGFPVAEVVDTVGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQVLGDSEGLPTRAELNAA 334 (336)
T ss_dssp GGCEEEEETTEEEEECCCCC-------CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHC------CCCCHHHHHCC
T ss_pred CCceEEEECCeEEEeCCccCCCCCCCccchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCccCCCCHHHHHhc
Confidence 999999998889999999998 999999999999999999999999999999999999999999994 24556777654
No 17
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=4.1e-38 Score=293.72 Aligned_cols=268 Identities=18% Similarity=0.216 Sum_probs=208.9
Q ss_pred cccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccceee
Q 038564 7 NHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRPII 70 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~v~ 70 (353)
|++|+|+|++++|++...+. .....+||++.|+|+++++||.++.++|.+|+|.+| +|+++++.
T Consensus 1 m~~v~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~ 80 (311)
T 2dcn_A 1 MAKLITLGEILIEFNALSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMK 80 (311)
T ss_dssp -CEEEEESCCEEEEEESSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCBCTTCE
T ss_pred CCCEEEECCceEEEecCCCCcccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHHcCCCcceEE
Confidence 36899999999999985432 456789999999999999999999999999999776 38888876
Q ss_pred c-CCCCCeEEEEEecccCCCCCCc--cEEEee--cCCCCCCCCCCCCCccccccceeeecC------CCcHHHHHHHHHH
Q 038564 71 V-PTSKTTVFHAYFDSISAPSGHA--DRVLKR--VCSCEPITPSDLPDGKFDYGMAVGVGG------EILPETLEKMLEI 139 (353)
Q Consensus 71 ~-~~~~T~~~~~~~~~~~~~~~~~--~~~~~~--~~a~~~l~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 139 (353)
. ++.+|+.+++.++. +++ ++++.. .++...+++++++...+...+++++.+ +.+.+.+.++++.
T Consensus 81 ~~~~~~t~~~~~~~~~-----~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~ 155 (311)
T 2dcn_A 81 IDPSAPTGIFFIQRHY-----PVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEI 155 (311)
T ss_dssp EETTSCCCEEEEEESC-----SSTTCEEEEEECTTCTGGGCCGGGCCHHHHTTCSEEEEEHHHHHSCHHHHHHHHHHHHH
T ss_pred EcCCCCceEEEEEECC-----CCCccceEEEecCcChhhhCChhhcChHHHcCCCEEEEeCcccccChHHHHHHHHHHHH
Confidence 4 66789988887753 344 444332 356667888777654455667777653 2344677777887
Q ss_pred hhhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCC--cccEeecCHHHHccC----CHHHHh----c-cCeEEEee
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLP--KIGFLKASSEEALFM----DVEEVR----K-LCCVVVTN 206 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~--~~dvl~~n~~Ea~~l----~~~~~~----~-~~~vvvT~ 206 (353)
++.. ++||+.+...| ... .+.+.++++ ++|++++|++|+..+ +.+++. + ++.||||+
T Consensus 156 a~~~---------~~D~~~~~~~~-~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~~~~vvvt~ 225 (311)
T 2dcn_A 156 ASNR---------SFDTNIRLKLW-SAEEAKREILKLLSKFHLKFLITDTDDSKIILGESDPDKAAKAFSDYAEIIVMKL 225 (311)
T ss_dssp CSSE---------EEECCCCTTTS-CHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSCCCHHHHHHHHTTTEEEEEEEE
T ss_pred HHHh---------CcCccCchhhC-ChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCCCCHHHHHHHHHHhCCEEEEEE
Confidence 7641 67776653322 111 134567889 999999999999875 333321 1 57899999
Q ss_pred CCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHHH
Q 038564 207 GREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQRV 284 (353)
Q Consensus 207 G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~~ 284 (353)
|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|++++++.|.. ..+.++++++
T Consensus 226 G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~ 305 (311)
T 2dcn_A 226 GPKGAIVYYDGKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETF 305 (311)
T ss_dssp ETTEEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHH
T ss_pred CCCCcEEEeCCcEEEeCCccccccCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Confidence 99999999988889999999999999999999999999999999999999999999999999999953 3678899999
Q ss_pred HhHhh
Q 038564 285 KDEVQ 289 (353)
Q Consensus 285 ~~~i~ 289 (353)
+++++
T Consensus 306 ~~~~~ 310 (311)
T 2dcn_A 306 LREMK 310 (311)
T ss_dssp HHHC-
T ss_pred HHhcc
Confidence 88764
No 18
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=3e-38 Score=296.97 Aligned_cols=269 Identities=16% Similarity=0.198 Sum_probs=214.0
Q ss_pred CCcccEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------c
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------T 64 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------v 64 (353)
.++++|+|+|++++|++...+. .....+||++.|+|++|++||.++.++|.+|+|..|+ |
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~~gv 83 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPGHVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKKIGY 83 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEEEEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHHHTE
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceEEEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHHcCC
Confidence 3468999999999999987653 3568999999999999999999999999999998773 8
Q ss_pred ccceee-cCCCCCeEEEEEecccCCCCCCccEE-EeecCCCCCCCCCCCCC--ccccccceeeecCCCcHHHHHHHHHHh
Q 038564 65 SYRPII-VPTSKTTVFHAYFDSISAPSGHADRV-LKRVCSCEPITPSDLPD--GKFDYGMAVGVGGEILPETLEKMLEIC 140 (353)
Q Consensus 65 d~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (353)
+++++. .++.+|+.+++.++. ++++.+ +...++...++++++.. ..+..+++++++++.+ +.+..+++ +
T Consensus 84 ~~~~v~~~~~~~T~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~-a 156 (328)
T 3kzh_A 84 HMDDSMVIEGGSTPTYLAILDE-----NGEMVSAIADMKSIGAMNTDFIDSKREIFENAEYTVLDSDNP-EIMEYLLK-N 156 (328)
T ss_dssp ECTTCEECTTCCCCEEEEEECT-----TSCEEEEEEECGGGGGCCHHHHHHTHHHHHTCSEEEEESSCH-HHHHHHHH-H
T ss_pred CccceEEeCCCCCeeEEEEEcC-----CCCEEEEEEchhhhhhCCHHHHHHHHHhhccCCEEEEeCCcH-HHHHHHHH-H
Confidence 888775 567789998888864 344544 34445555555554432 2355678888888776 77777776 5
Q ss_pred hhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC------HHH---H------hccCeEEEe
Q 038564 141 NVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD------VEE---V------RKLCCVVVT 205 (353)
Q Consensus 141 ~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~------~~~---~------~~~~~vvvT 205 (353)
+. .+...++||.... ..+.+.++++++|++++|++|+..+. .++ + .+++.|+||
T Consensus 157 ~~-----~~~~v~~D~~~~~------~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt 225 (328)
T 3kzh_A 157 FK-----DKTNFILDPVSAE------KASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFIS 225 (328)
T ss_dssp HT-----TTSEEEEECCSHH------HHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hh-----cCCcEEEEeCCHH------HHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEE
Confidence 43 4556677875421 11235678899999999999998761 222 1 247899999
Q ss_pred eCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHH
Q 038564 206 NGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQR 283 (353)
Q Consensus 206 ~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~ 283 (353)
+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|. +.++.+++++
T Consensus 226 ~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~~~v~~ 305 (328)
T 3kzh_A 226 LDADGIFYNDGVSCGKIKATEVDVKNVTGAGDSFVAGLGYGYMNKMPIEDIVKFAMTMSNITISHEETIHPDMALDTVLA 305 (328)
T ss_dssp CGGGCEEEECSSCEEEEEESSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCTTCSHHHHHH
T ss_pred eCCCCEEEEeCCceEEecCCCcccCCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCcCCHHHHHH
Confidence 99999999998889999999999999999999999999999999999999999999999999999993 6778999999
Q ss_pred HHhHhhhe
Q 038564 284 VKDEVQRR 291 (353)
Q Consensus 284 ~~~~i~~~ 291 (353)
++++....
T Consensus 306 ~~~~~~~~ 313 (328)
T 3kzh_A 306 KLEKTTWE 313 (328)
T ss_dssp HHHTCCEE
T ss_pred Hhhhcchh
Confidence 99877543
No 19
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=7.4e-38 Score=291.80 Aligned_cols=267 Identities=21% Similarity=0.217 Sum_probs=207.8
Q ss_pred cccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------cccceee
Q 038564 7 NHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TSYRPII 70 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd~~~v~ 70 (353)
|++|+++|++++|++...+. .....+||++.|+|++|++||.++.++|.+|+|.+|+ |+++++.
T Consensus 1 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~~gv~~~~v~ 80 (309)
T 1v1a_A 1 MLEVVTAGEPLVALVPQEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFR 80 (309)
T ss_dssp CCSEEEESCCEEEEECSSSSCGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHHTCBCTTEE
T ss_pred CCcEEEEccceEEEecCCCCcccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCCceEE
Confidence 35899999999999975432 3567899999999999999999999999999998773 8888886
Q ss_pred c-CCCCCeEEEEEecccCCCCCCccEEEee--cCCCCCCCCCCCCCccccccceeeecCCC------cHHHHHHHHHHhh
Q 038564 71 V-PTSKTTVFHAYFDSISAPSGHADRVLKR--VCSCEPITPSDLPDGKFDYGMAVGVGGEI------LPETLEKMLEICN 141 (353)
Q Consensus 71 ~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~l~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~ 141 (353)
. ++ +|+.+++.++. +++++++.. .++...+++++++...+...+++++.+.. +.+.+.++++.++
T Consensus 81 ~~~~-~t~~~~~~~~~-----~g~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a~ 154 (309)
T 1v1a_A 81 RAPG-FTGLYLREYLP-----LGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAK 154 (309)
T ss_dssp ECSS-CCCEEEEEECT-----TSCEEEEEECTTCSGGGCCTTSSCGGGGTTCSEEEEETTGGGSCHHHHHHHHHHHHHHH
T ss_pred EcCC-CCEEEEEEECC-----CCCceEEEeCCCChhhhCCHhhCChhHhcCCCEEEEeCchhccCchHHHHHHHHHHHHH
Confidence 4 55 89988877653 344444332 35566788888776556667777776432 3466777788776
Q ss_pred hhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccCC--HHHH---hccCeEEEeeCCCceEEE
Q 038564 142 VVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFMD--VEEV---RKLCCVVVTNGREGSEVY 214 (353)
Q Consensus 142 ~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l~--~~~~---~~~~~vvvT~G~~Ga~~~ 214 (353)
. .+...++||+.+...| ... .+.+.++++++|++++|++|+..+. .+++ .+++.||||+|++|+++
T Consensus 155 ~-----~g~~v~~D~~~~~~~~-~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~g~~~vvvt~G~~G~~~- 227 (309)
T 1v1a_A 155 R-----RGVRVSLDVNYRQTLW-SPEEARGFLERALPGVDLLFLSEEEAELLFGRVEEALRALSAPEVVLKRGAKGAWA- 227 (309)
T ss_dssp T-----TTCEEEEECCCCTTTS-CHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSSHHHHHHHTCCSEEEEECGGGCEEE-
T ss_pred H-----cCCEEEEeCCCCcccC-CHHHHHHHHHHHHHhCCEEECcHHHHHHHhCCHHHHHHhcCCCEEEEEecCCCeeE-
Confidence 5 5666788887654322 111 2346678899999999999998762 1222 35789999999999998
Q ss_pred Ec-CceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHHHHh
Q 038564 215 YR-DGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQRVKD 286 (353)
Q Consensus 215 ~~-~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~~~~ 286 (353)
++ ++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|++++++.|.. ..+.++++++++
T Consensus 228 ~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~~~v~~~~~ 302 (309)
T 1v1a_A 228 FVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEVLLK 302 (309)
T ss_dssp EETTEEEECCCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSTTTTTCCCHHHHTTCC-
T ss_pred ecCCcEEEeCCCCCCcCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCcCCCCHHHHHHHHh
Confidence 66 6678999999999999999999999999999999999999999999999999999953 356777766554
No 20
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=8.1e-38 Score=296.57 Aligned_cols=275 Identities=12% Similarity=0.137 Sum_probs=200.5
Q ss_pred CCCCcccEEEEccceeeeeeccCc------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------ccc
Q 038564 3 RNHSNHGILIVGNYCHDVLIRNGT------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TSY 66 (353)
Q Consensus 3 ~~~~~~~ilviG~~~iD~~~~~~~------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd~ 66 (353)
-+.||++|+++|++++|+.+..+. .+..++||+++|+|++|+|||.++.++|.||+|.+|+ ||+
T Consensus 20 ~~~mm~kv~~~GE~m~~l~p~~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~~GVdt 99 (351)
T 4gm6_A 20 FQSMMKQVVTIGELLMRLSTQQGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWRHQVDT 99 (351)
T ss_dssp -----CEEEEECCCEEEEECCTTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTEEC
T ss_pred hHhccCCEEEEcceeEEecCCCCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCCc
Confidence 356788999999999999876542 4567899999999999999999999999999998873 999
Q ss_pred ceeecCCCCCeEEEEEecccCCCCCCccEEEeecC--CCCCCCCCCCCC-ccccccceeeec------CCCcHHHHHHHH
Q 038564 67 RPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVC--SCEPITPSDLPD-GKFDYGMAVGVG------GEILPETLEKML 137 (353)
Q Consensus 67 ~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~--a~~~l~~~~l~~-~~~~~~~~~~~~------~~~~~~~~~~~~ 137 (353)
+++...+.+++.+.+.... ..+.+.+..... +...+.+.++.. ..+...+++++. .+.+.+.+.+++
T Consensus 100 ~~v~~~~~~~t~~~~~~~~----~~~~~~~~~~~~~~a~~~~~~~d~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 175 (351)
T 4gm6_A 100 AFVVEAGDRLGTYYLESGT----ALKAPSVVYDRQHSSFARHKSMDWDLSELLKGIRVLHVSGITIALSTFWLEMVVKII 175 (351)
T ss_dssp TTEEECSSCCCEEEEECCB----TTBCCEEEEECTTCHHHHCCCCCCCHHHHHTTEEEEEEEHHHHHHCHHHHHHHHHHH
T ss_pred ccccccCCccceeEEEEcc----CCcceEEEEccccchhhhCCccccCHHHHHhhcccceecccchhhchhHHHHHHHHH
Confidence 9987655555555544432 233344433221 112234444432 234455566554 234457788889
Q ss_pred HHhhhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccCC--------HHH-H----hc----
Q 038564 138 EICNVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFMD--------VEE-V----RK---- 198 (353)
Q Consensus 138 ~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l~--------~~~-~----~~---- 198 (353)
+.++. .+...+|||++|+..| ... .+.+.++++++|++++|++|+..+. ..+ . ..
T Consensus 176 ~~ak~-----~g~~v~~D~n~r~~lw-~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T 4gm6_A 176 REAKR-----NGIKISFDMNYRAKLW-ELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIELF 249 (351)
T ss_dssp HHHHH-----TTCEEEEECCCCTTTS-CHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCCEE
T ss_pred HHHHH-----cCCCcccCCCcCchhh-hhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhhhh
Confidence 99887 7888899999876554 322 2446778999999999999998761 111 1 11
Q ss_pred --cCeEEEeeC--CCceEEEEcCceEEEcCccc-cccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccC-
Q 038564 199 --LCCVVVTNG--REGSEVYYRDGKVKVSPFLA-NQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIG- 272 (353)
Q Consensus 199 --~~~vvvT~G--~~Ga~~~~~~~~~~~pa~~v-~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G- 272 (353)
.+.++++.+ ..|..++..++.++.|++++ ++||||||||+|+|||+++|++|+++++|+++|+++||++|++.|
T Consensus 250 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~g~~~~~al~~A~aaaal~v~~~Ga 329 (351)
T 4gm6_A 250 YATKRTVISASHHLLQGHLWTQGECWESEEYAIYPIVDRVGGGDAYTAAVLHGILSEWRPDETVKFATAAAGLKHSIHGD 329 (351)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTEEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSS
T ss_pred hccccceeeeccCCceEEEEeCCceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 123444444 45677888888888888775 789999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhH
Q 038564 273 LPKFDSRVLQRVKDE 287 (353)
Q Consensus 273 ~~~~~~~~~~~~~~~ 287 (353)
.+.++.+++++++.+
T Consensus 330 ~~~~~~~ev~~~l~~ 344 (351)
T 4gm6_A 330 INPFDEKTIADFAAD 344 (351)
T ss_dssp SCCCCHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHhC
Confidence 577788899999875
No 21
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=8.5e-38 Score=292.50 Aligned_cols=273 Identities=19% Similarity=0.174 Sum_probs=212.7
Q ss_pred CcccEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------cc
Q 038564 6 SNHGILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TS 65 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd 65 (353)
.|++|+|+|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+|+ |+
T Consensus 2 ~m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~ 81 (317)
T 2nwh_A 2 HMKKILVLGGAHIDRRGMIETETAPGASNPGSWMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQAGVE 81 (317)
T ss_dssp -CCEEEEESCCEEEEEEEESSSCCTTSCCCEEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHHTTCE
T ss_pred CCCeEEEECchheEEeeccCCCCCCCCCceEeEEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHHcCCC
Confidence 357899999999999986542 3567899999999999999999999999999998773 88
Q ss_pred cceeecCCCCCeEEEEEecccCCCCCCccEEE-eecCCCCCCCCCCCCC----ccccccceeeecCCCcHHHHHHHHHHh
Q 038564 66 YRPIIVPTSKTTVFHAYFDSISAPSGHADRVL-KRVCSCEPITPSDLPD----GKFDYGMAVGVGGEILPETLEKMLEIC 140 (353)
Q Consensus 66 ~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~-~~~~a~~~l~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a 140 (353)
++++..++.+|+.+++.++. ++++++. ...+++..++++++.. ..+..+++++++++.+.+.+.++++.+
T Consensus 82 ~~~~~~~~~~T~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 156 (317)
T 2nwh_A 82 DTPFTFLDRRTPSYTAILER-----DGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTALGLIA 156 (317)
T ss_dssp ECCEEETTSCCCEEEEEECT-----TSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEEEETTSCHHHHHHHHHHH
T ss_pred CCCcccCCCCCceEEEEEcC-----CCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEEEeCCCCHHHHHHHHHHH
Confidence 88855677799998888763 3455543 3334445566665543 235567888888878888999998888
Q ss_pred hhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC---HHH-------H--hccCeEEEeeCC
Q 038564 141 NVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD---VEE-------V--RKLCCVVVTNGR 208 (353)
Q Consensus 141 ~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~---~~~-------~--~~~~~vvvT~G~ 208 (353)
+. .+...++||.... ..+.+.++++++|++++|++|+..+. .++ + .+++.||||+|+
T Consensus 157 ~~-----~g~~v~~Dp~~~~------~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~l~~~g~~~vvvt~G~ 225 (317)
T 2nwh_A 157 RA-----CEKPLAAIAISPA------KAVKLKAALGDIDILFMNEAEARALTGETAENVRDWPNILRKAGLSGGVVTRGA 225 (317)
T ss_dssp HH-----TTCCEEEECCSHH------HHGGGTTTGGGCSEEEEEHHHHHHHHC-----CTTHHHHHHHTTCCCEEEEETT
T ss_pred Hh-----cCCeEEEeCCCHH------HHHHHHHHhhhCeEecCCHHHHHHHhCCChhHHHHHHHHHHHcCCCEEEEEECC
Confidence 75 4555677765311 11345678899999999999997651 111 1 246899999999
Q ss_pred CceEEEEcCc-eEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHHHH
Q 038564 209 EGSEVYYRDG-KVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQRVK 285 (353)
Q Consensus 209 ~Ga~~~~~~~-~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~~~ 285 (353)
+|++++++++ .+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+.+|++.|.. ..+.+++++++
T Consensus 226 ~G~~~~~~~~~~~~~~~~~v~~vdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~v~~~~ 305 (317)
T 2nwh_A 226 SEVVAFNGTEKAILHPPLIREVKDVTGAGDAMASGYLAAIAEGKTIREALRQGAAAAAITVQSSFATSQDLSKDSVEAML 305 (317)
T ss_dssp TEEEEECSSCEEEECCCCSSSCSCCCCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHSSTTCCGGGCCHHHHHHHH
T ss_pred CcEEEEcCCCceEEeCCCCccccCCCChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHhHh
Confidence 9999988764 68999999999999999999999999999999999999999999999999999953 46788999887
Q ss_pred hHhh-heeec
Q 038564 286 DEVQ-RRKLS 294 (353)
Q Consensus 286 ~~i~-~~~~~ 294 (353)
..+. .+|+.
T Consensus 306 ~~~~~~~~~~ 315 (317)
T 2nwh_A 306 GLVPQAEMLA 315 (317)
T ss_dssp TTSCCEEEC-
T ss_pred hhhccCcccC
Confidence 7774 44443
No 22
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=4e-38 Score=298.98 Aligned_cols=263 Identities=21% Similarity=0.241 Sum_probs=211.7
Q ss_pred CCcccEEEEccceeeeeeccCc-----------------------------ccccccCChHHHHHHHHHhCCCCeEEEEE
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT-----------------------------VLAETLGGAASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~-----------------------------~~~~~~GG~a~N~A~~la~LG~~v~~ig~ 55 (353)
+++++|+++|++++|++...+. .....+||++.|+|+++++||.++.++|.
T Consensus 23 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig~ 102 (352)
T 4e3a_A 23 MTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFGN 102 (352)
T ss_dssp CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEECC
T ss_pred CCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEEE
Confidence 4568999999999999887753 12468999999999999999999999999
Q ss_pred ecCCCCC----------Ccccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeee
Q 038564 56 VGHDFKY----------ETSYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGV 124 (353)
Q Consensus 56 vG~D~~g----------~vd~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~ 124 (353)
||+|..| +|+++++.. ++.+|+.+.++++. ++++++..+.+++..++++++....+..++++++
T Consensus 103 vG~D~~G~~l~~~l~~~GV~~~~~~~~~~~~T~~~~v~v~~-----~g~r~~~~~~ga~~~l~~~~~~~~~~~~~~~v~~ 177 (352)
T 4e3a_A 103 VAADQLGDIFTHDIRAQGVHYQTKPKGAFPPTARSMIFVTE-----DGERSMNTYLGACVELGPEDVEADVVADAKVTYF 177 (352)
T ss_dssp CCSSHHHHHHHHHHHHTTCEECCCCCCSSSCCEEEEEEECT-----TSCEEEEEECGGGGGCCGGGCCHHHHHTEEEEEE
T ss_pred ECCChHHHHHHHHHHHcCCccceeeccCCCCCeEEEEEEcC-----CCceEEEeccChhhcCChhhCCHHHHhhCCEEEE
Confidence 9999877 388888764 56789988888763 5667777777888888988887666666777776
Q ss_pred c-----CCCcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC--cccEeecCHHHHccC----CH
Q 038564 125 G-----GEILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP--KIGFLKASSEEALFM----DV 193 (353)
Q Consensus 125 ~-----~~~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~Ea~~l----~~ 193 (353)
. .+.+.+.+.++++.++. .+...++|+.... +.....+.+.++++ ++|++++|++|+..+ +.
T Consensus 178 ~G~~~~~~~~~~~~~~~~~~a~~-----~g~~v~~D~~~~~--~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~~~~ 250 (352)
T 4e3a_A 178 EGYLWDPPRAKEAILDCARIAHQ-----HGREMSMTLSDSF--CVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQTDDF 250 (352)
T ss_dssp EGGGGSSSSHHHHHHHHHHHHHH-----TTCEEEEECCCHH--HHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTCSCH
T ss_pred eeeecCCchHHHHHHHHHHHHHH-----cCCEEEEECCchh--hHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCCCCH
Confidence 5 34567888888888875 4566677764310 01111244677888 899999999999876 33
Q ss_pred HHH-----hccCeEEEeeCCCceEEEEcCceEEEcCcccc-ccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 038564 194 EEV-----RKLCCVVVTNGREGSEVYYRDGKVKVSPFLAN-QIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSIT 267 (353)
Q Consensus 194 ~~~-----~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~-~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~ 267 (353)
+++ .+++.||||+|++|++++++++.+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|+++|+++
T Consensus 251 ~~a~~~l~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~agfl~~l~~g~~l~~a~~~A~~aAa~~ 330 (352)
T 4e3a_A 251 EEALNRIAADCKIAAVTMSENGAVILKGRERYYVNAIRIREVVDTTGAGDLFASGFLYGYTQGRSLEDCGKLGCLAAGIV 330 (352)
T ss_dssp HHHHHHHHHHSSEEEEECGGGCEEEEETTEEEEECCCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEECCCceEEEECCEEEEECCccCCCCcCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 332 24789999999999999998899999999986 899999999999999999999999999999999999999
Q ss_pred hcccCC-CCCCHH
Q 038564 268 VAQIGL-PKFDSR 279 (353)
Q Consensus 268 v~~~G~-~~~~~~ 279 (353)
|++.|. +..+..
T Consensus 331 v~~~G~~~~~~~~ 343 (352)
T 4e3a_A 331 IQQIGPRPMTSLS 343 (352)
T ss_dssp TTSSSSSCSSCHH
T ss_pred HcCCCCCCCcCHH
Confidence 999994 444433
No 23
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=4.1e-37 Score=288.16 Aligned_cols=267 Identities=19% Similarity=0.230 Sum_probs=212.5
Q ss_pred CcccEEEEccceeee-eeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cc
Q 038564 6 SNHGILIVGNYCHDV-LIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ET 64 (353)
Q Consensus 6 ~~~~ilviG~~~iD~-~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~v 64 (353)
|.|-+.|.+++++|+ ++..+. .....+||++.|+|++|++||.++.++|.+|+| +| +|
T Consensus 1 ~~mi~tvt~np~iD~~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv 79 (320)
T 3ie7_A 1 MSLIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKEKHI 79 (320)
T ss_dssp -CCEEEEESSCEEEEEEEESSSCCTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHHTTC
T ss_pred CceEEEEecchHHeeeEEEcCCccCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCC
Confidence 346788999999999 877652 467899999999999999999999999999998 76 38
Q ss_pred cccee-ecCCCCCeEEEEEecccCCCCCCc--cEEEeecCCCCCCCCCCCCC------ccccccceeeecCCC----cHH
Q 038564 65 SYRPI-IVPTSKTTVFHAYFDSISAPSGHA--DRVLKRVCSCEPITPSDLPD------GKFDYGMAVGVGGEI----LPE 131 (353)
Q Consensus 65 d~~~v-~~~~~~T~~~~~~~~~~~~~~~~~--~~~~~~~~a~~~l~~~~l~~------~~~~~~~~~~~~~~~----~~~ 131 (353)
+++++ ..++ +|+.+.++++. ++ ++++...++ .+++++++. ..+...+++++++.. +.+
T Consensus 80 ~~~~v~~~~~-~t~~~~~~~~~------g~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 150 (320)
T 3ie7_A 80 NHDFLVEAGT-STRECFVVLSD------DTNGSTMIPEAGF--TVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLS 150 (320)
T ss_dssp CBCCEEETTC-CCEEEEEEEET------TCSCCEEEECCCC--CCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHH
T ss_pred ceEEEEecCC-CCceEEEEEEC------CCceeEEEeCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHH
Confidence 99988 5554 88888887763 33 556554443 455555432 234556777776543 457
Q ss_pred HHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC-cccEeecCHHHHccCC-------HHHHh----cc
Q 038564 132 TLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP-KIGFLKASSEEALFMD-------VEEVR----KL 199 (353)
Q Consensus 132 ~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~Ea~~l~-------~~~~~----~~ 199 (353)
.+.++++.++. .+...++||+. ..+.+.+. ++|++++|++|+..+. .+++. +.
T Consensus 151 ~~~~~~~~a~~-----~g~~v~~D~~~----------~~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~ 215 (320)
T 3ie7_A 151 DFKELLRTVKA-----TGAFLGCDNSG----------EYLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEKI 215 (320)
T ss_dssp HHHHHHHHHHH-----HTCEEEEECCH----------HHHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHh-----cCCEEEEECCh----------HHHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHHHHHHHhhC
Confidence 88888888875 45566778742 23445564 8999999999998861 22222 36
Q ss_pred CeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCCCHH
Q 038564 200 CCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSR 279 (353)
Q Consensus 200 ~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~~~ 279 (353)
+.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|....+.+
T Consensus 216 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~ 295 (320)
T 3ie7_A 216 PYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATGCSASKVMQQDSSSFDLE 295 (320)
T ss_dssp SEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCCHH
T ss_pred CEEEEEcCCCceEEEeCCcEEEEeCCccCCCCCcCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCcCCCCCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999997777899
Q ss_pred HHHHHHhHhhheeecccc
Q 038564 280 VLQRVKDEVQRRKLSCSE 297 (353)
Q Consensus 280 ~~~~~~~~i~~~~~~~~~ 297 (353)
+++++++++++++++.-+
T Consensus 296 ev~~~~~~~~i~~~~~~~ 313 (320)
T 3ie7_A 296 AAGKLKNQVSIIQLEERE 313 (320)
T ss_dssp HHHHHGGGCEEEECC---
T ss_pred HHHHHhhCeEEEEccccc
Confidence 999999999998886643
No 24
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=1.5e-37 Score=293.58 Aligned_cols=269 Identities=15% Similarity=0.135 Sum_probs=202.4
Q ss_pred ccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccceeec-CCCCC
Q 038564 8 HGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRPIIV-PTSKT 76 (353)
Q Consensus 8 ~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~v~~-~~~~T 76 (353)
++|+|+|++++|++..........+||+++|+|+++++||.++.++|.+|+|.+| +||++++.. ++.+|
T Consensus 25 ~~ilviG~~~~D~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~~gVd~~~v~~~~~~~T 104 (339)
T 1tyy_A 25 NKVWVIGDASVDLVPEKQNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRLDADLTS 104 (339)
T ss_dssp CCEEEESCCEEEEEECSSSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHTTTEECTTEEECTTSCC
T ss_pred CCEEEECcceeEEeccCCCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHHcCCCchheEecCCCCC
Confidence 4899999999999987555677899999999999999999999999999999776 388888864 66789
Q ss_pred eEEEEEecccCCCCCCccEEEee--cCCCCCCCCCCCCCccccccceeeecC-----CCcHHHHHHHHHHhhhhhccccc
Q 038564 77 TVFHAYFDSISAPSGHADRVLKR--VCSCEPITPSDLPDGKFDYGMAVGVGG-----EILPETLEKMLEICNVVLVDIQS 149 (353)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~v~~D~~g 149 (353)
+.+++.++. ++++.+..+ .+++..+++++. ..+...+++++.+ +.+.+.+.++++.++. .+
T Consensus 105 ~~~~v~~~~-----~g~r~~~~~~~~~a~~~l~~~~~--~~l~~~~~v~~~~~~l~~~~~~~~~~~~~~~a~~-----~g 172 (339)
T 1tyy_A 105 AVLIVNLTA-----DGERSFTYLVHPGADTYVSPQDL--PPFRQYEWFYFSSIGLTDRPAREACLEGARRMRE-----AG 172 (339)
T ss_dssp CEEEEC------------CEEECCSSCGGGGCCGGGC--CCCCTTCEEEEEHHHHSSHHHHHHHHHHHHHHHH-----TT
T ss_pred eEEEEEEcC-----CCCeEEEEecCCChhhhCCcchh--hHhccCCEEEEcchhhcCcccHHHHHHHHHHHHH-----cC
Confidence 988776653 344444322 244444544421 2344556666532 3345677788888775 56
Q ss_pred ceEEEecCCCccCCCCC--ChhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeCCCceEEEEcC
Q 038564 150 VIRVFDSVDGTVNPVPL--KESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNGREGSEVYYRD 217 (353)
Q Consensus 150 ~~~~~d~~~~~~~~~~~--~~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G~~Ga~~~~~~ 217 (353)
...++||+.+...|... ..+.+.++++++|++++|++|+..+ +++++ .+++.||||+|++|+++++++
T Consensus 173 ~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~ 252 (339)
T 1tyy_A 173 GYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGASHWQDARYYLRDLGCDTTIISLGADGALLITAE 252 (339)
T ss_dssp CEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCCSSGGGGSSTTGGGTCSCEEEECGGGCEEEESSS
T ss_pred CEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEEECCCceEEEeCC
Confidence 66788887654322211 1234567889999999999999875 23332 246899999999999999888
Q ss_pred ceEEEcCccccccCCCCCchHHHHHHHHHHHcC-----CCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHHHhHh
Q 038564 218 GKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQG-----LAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQRVKDEV 288 (353)
Q Consensus 218 ~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g-----~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~~~~~i 288 (353)
+.+++|+++++++|||||||+|+|||+++|++| +++++|+++|+++|+++|++.|. ...+.+++++++++.
T Consensus 253 ~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~~~~~~l~~a~~~A~a~aa~~v~~~G~~~~~p~~~ev~~~l~~~ 330 (339)
T 1tyy_A 253 GEFHFPAPRVDVVDTTGAGDAFVGGLLFTLSRANCWDHALLAEAISNANACGAMAVTAKGAMTALPFPDQLNTFLSSH 330 (339)
T ss_dssp CEEEECCCCCCCSCCTTHHHHHHHHHHHHHTTSSSCCHHHHHHHHHHHHHHHHHGGGSSSTTTTCCCHHHHHHHHC--
T ss_pred ceEEcCCCCCCcCCCCCchHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHhcC
Confidence 889999999999999999999999999999997 89999999999999999999995 346678888887653
No 25
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.2e-36 Score=284.04 Aligned_cols=261 Identities=17% Similarity=0.203 Sum_probs=206.8
Q ss_pred CCcccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCC-eEEEEEecCCCCCC--------c
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSIS-CSLIAKVGHDFKYE--------T 64 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~-v~~ig~vG~D~~g~--------v 64 (353)
.|-++|+|+|++++|++...+. .....+||++.|+|+++++||.+ +.++|.+|+|.+|+ -
T Consensus 12 ~~~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~~ 91 (311)
T 1vm7_A 12 HMFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEKL 91 (311)
T ss_dssp -CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHHT
T ss_pred cccCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHHC
Confidence 3558999999999999986542 35567999999999999999999 99999999997774 1
Q ss_pred ccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHHHhhhh
Q 038564 65 SYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLEICNVV 143 (353)
Q Consensus 65 d~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 143 (353)
.+ ++.. ++.+|+.+++.++. +++++++...+++..+++++++...+..+++++++++.+.+.+.++ ++.
T Consensus 92 gV-~v~~~~~~~T~~~~~~~~~-----~g~~~~~~~~ga~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---a~~- 161 (311)
T 1vm7_A 92 GI-TGYIRVSLPTGRAFIEVDK-----TGQNRIIIFPGANAELKKELIDWNTLSESDILLLQNEIPFETTLEC---AKR- 161 (311)
T ss_dssp TE-EEEEECSSCCCEEEEEECT-----TSCEEEEEECGGGGGCCGGGCCHHHHTTCSEEEECSSSCHHHHHHH---HHH-
T ss_pred CC-EEEEcCCCCCeEEEEEECC-----CCCEEEEEecCccccCCHHHhChhhcccCCEEEEeCCCCHHHHHHH---HHH-
Confidence 22 5543 67789998888763 4566666667777778888776444566788888888777766555 332
Q ss_pred hcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC---------HHHH------hccCeEEEeeCC
Q 038564 144 LVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD---------VEEV------RKLCCVVVTNGR 208 (353)
Q Consensus 144 ~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~---------~~~~------~~~~~vvvT~G~ 208 (353)
.+...++||+.. ...+.++++++|++++|++|+..+. .+++ .+++.|+||+|+
T Consensus 162 ----~~~~v~~Dp~~~--------~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~ 229 (311)
T 1vm7_A 162 ----FNGIVIFDPAPA--------QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGD 229 (311)
T ss_dssp ----CCSEEEECCCSC--------TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGG
T ss_pred ----cCCEEEEeCcch--------hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECC
Confidence 344567777542 1123467899999999999998762 2221 246899999999
Q ss_pred CceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC--CCCCHHHHHHHHh
Q 038564 209 EGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL--PKFDSRVLQRVKD 286 (353)
Q Consensus 209 ~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~--~~~~~~~~~~~~~ 286 (353)
+|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|. ...+.++++++++
T Consensus 230 ~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~ 309 (311)
T 1vm7_A 230 KGVLLVNKNEKKHFPTFKVKAVDTTAAGDVFNGAFAVALSEGKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFLK 309 (311)
T ss_dssp GCEEEEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSSSGGGCCCHHHHHHHHH
T ss_pred CCeEEEeCCceEEecCCCcccCCCCccHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhCcCCccccCCCHHHHHHHHh
Confidence 99999988888899999999999999999999999999999999999999999999999999995 2456888888876
Q ss_pred H
Q 038564 287 E 287 (353)
Q Consensus 287 ~ 287 (353)
+
T Consensus 310 ~ 310 (311)
T 1vm7_A 310 N 310 (311)
T ss_dssp T
T ss_pred c
Confidence 5
No 26
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=9.1e-37 Score=287.13 Aligned_cols=272 Identities=16% Similarity=0.209 Sum_probs=205.9
Q ss_pred cccEEEEccceeeeeeccCc-------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------ccccee
Q 038564 7 NHGILIVGNYCHDVLIRNGT-------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TSYRPI 69 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~-------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd~~~v 69 (353)
+++|+|+|++++|++....+ .....+||++.|+|+++++||.++.++|.+|+|.+|+ ||++++
T Consensus 11 ~~~i~viG~~~~D~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~gV~~~~v 90 (332)
T 2qcv_A 11 EFDLIAIGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRGVGVDTSNL 90 (332)
T ss_dssp SEEEEEESCCEEEEEESSCSSCGGGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHHTTCBCTTE
T ss_pred CCcEEEECcceEEEecCCCCCCccccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHHcCCCCcce
Confidence 46899999999999986532 3567899999999999999999999999999998773 899888
Q ss_pred ec-C-CCCCeEEEEEecccCCCCCCccEE-Eee-cCCCCCCCCCCCCCccccccceeeecC-----CCcHHHHHHHHHHh
Q 038564 70 IV-P-TSKTTVFHAYFDSISAPSGHADRV-LKR-VCSCEPITPSDLPDGKFDYGMAVGVGG-----EILPETLEKMLEIC 140 (353)
Q Consensus 70 ~~-~-~~~T~~~~~~~~~~~~~~~~~~~~-~~~-~~a~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a 140 (353)
.. + ..+|+.+++.++. .+++++ +.. .++...+++++++...+...+++++.+ +.+.+.+.++++.+
T Consensus 91 ~~~~~~~~t~~~~v~~~~-----~g~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~a 165 (332)
T 2qcv_A 91 VVDQEGHKTGLAFTEIKS-----PEECSILMYRQDVADLYLSPEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIRLA 165 (332)
T ss_dssp EECSSCCCCCEEEEEEEE-----TTEEEEEEECTTCGGGGCCGGGCCHHHHTTEEEEEEEGGGGSSTTHHHHHHHHHHHH
T ss_pred EecCCCCCceEEEEEEcC-----CCCccEEEECCcchhhhCCHhHCCHHHHccCCEEEEeCccccCchhHHHHHHHHHHH
Confidence 64 3 3578887776553 233333 322 334556777777654455566666543 33457788888888
Q ss_pred hhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccCC-------HHHH------hccCeEEEe
Q 038564 141 NVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFMD-------VEEV------RKLCCVVVT 205 (353)
Q Consensus 141 ~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l~-------~~~~------~~~~~vvvT 205 (353)
+. .+...++||+.+...|.... .+.+.++++++|++++|++|+..+. .+++ .+++.||||
T Consensus 166 ~~-----~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~l~~~g~~~vvvt 240 (332)
T 2qcv_A 166 KR-----NDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTEKGDNDETIRYLFKHSPELIVIK 240 (332)
T ss_dssp HH-----TTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSSCCCHHHHHHHHTTSSCSEEEEE
T ss_pred HH-----CCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCcCCCHHHHHHHHHHcCCCEEEEE
Confidence 75 56667888876543332111 1235567899999999999997652 2221 246899999
Q ss_pred eCCCceEEEEc-CceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHH
Q 038564 206 NGREGSEVYYR-DGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQ 282 (353)
Q Consensus 206 ~G~~Ga~~~~~-~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~ 282 (353)
+|++|++++++ ++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.. ..+.++++
T Consensus 241 ~G~~G~~~~~~~~~~~~~~~~~v~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~ 320 (332)
T 2qcv_A 241 HGVEGSFAYTKAGEAYRGYAYKTKVLKTFGAGDSYASAFLYALISGKGIETALKYGSASASIVVSKHSSSDAMPSVEEIE 320 (332)
T ss_dssp CGGGCEEEEETTSCEEEECCBCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHC-----CCCCHHHHH
T ss_pred ECCcceEEEecCCceEEcCCCCccccCCCCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCccCCCCHHHHH
Confidence 99999999988 5688999999999999999999999999999999999999999999999999999952 45678888
Q ss_pred HHHhHh
Q 038564 283 RVKDEV 288 (353)
Q Consensus 283 ~~~~~i 288 (353)
+++++.
T Consensus 321 ~~l~~~ 326 (332)
T 2qcv_A 321 ALIEKD 326 (332)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 888754
No 27
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=6.3e-38 Score=299.56 Aligned_cols=262 Identities=13% Similarity=0.133 Sum_probs=209.6
Q ss_pred CCcccEEEEccceeeeeeccCc-------------------------------ccccccCChHHHHHHHHHhC---CCCe
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT-------------------------------VLAETLGGAASFISNVLNGL---SISC 50 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~-------------------------------~~~~~~GG~a~N~A~~la~L---G~~v 50 (353)
+++.+|+++|++++|++...+. .....+||++.|+|+++++| |.++
T Consensus 22 m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~~~ 101 (370)
T 3vas_A 22 LSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVC 101 (370)
T ss_dssp CCTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTTCE
T ss_pred cCCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCCcE
Confidence 4457899999999999998872 45779999999999999999 9999
Q ss_pred EEEEEecCCCCC----------Ccccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCC----cc
Q 038564 51 SLIAKVGHDFKY----------ETSYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPD----GK 115 (353)
Q Consensus 51 ~~ig~vG~D~~g----------~vd~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~----~~ 115 (353)
.++|.||+|.+| +|+++++.. ++.+|+.+++.++ +++++++...+++..++++++.. ..
T Consensus 102 ~~ig~vG~D~~G~~~~~~L~~~GV~~~~~~~~~~~~Tg~~~i~v~------~g~rt~~~~~ga~~~l~~~~~~~~~~~~~ 175 (370)
T 3vas_A 102 SYVGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS------EKLRSMVTYLGAACDLSLAHIEQPHVWSL 175 (370)
T ss_dssp EEEEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC------SSCEEEEEEEEGGGGCCHHHHTSHHHHHH
T ss_pred EEEEEEcCChhHHHHHHHHHHcCCcccccccCCCCCceEEEEEEe------CCceeEEEccchhhhCCHHHcCchhhHHH
Confidence 999999999877 388888876 6789999888874 35677777788888888888775 24
Q ss_pred ccccceeeecC---CCcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC
Q 038564 116 FDYGMAVGVGG---EILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD 192 (353)
Q Consensus 116 ~~~~~~~~~~~---~~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~ 192 (353)
+..++++++.+ +++++.+.++++.++. .+....+|+.. +.+.....+.+.++++++|++++|++|+..+.
T Consensus 176 ~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~-----~g~~v~ld~~~--~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~ 248 (370)
T 3vas_A 176 VEKAQVYYIAGFVINTCYEGMLKIAKHSLE-----NEKLFCFNLSA--PFLSQFNTKEVDEMISYSNIVFGNESEAEAYG 248 (370)
T ss_dssp HHHCSEEEEEGGGHHHHHHHHHHHHHHHHH-----TTCEEEEECCC--HHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHH
T ss_pred HhhCCEEEEEeeeccCCHHHHHHHHHHHHH-----cCCEEEEECCc--HHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHh
Confidence 56677888754 2356788888888875 45556666532 11111112456788999999999999998761
Q ss_pred ---------HHH----Hh---------ccCeEEEeeCCCceEEEE--cCceEEEcCccc---cccCCCCCchHHHHHHHH
Q 038564 193 ---------VEE----VR---------KLCCVVVTNGREGSEVYY--RDGKVKVSPFLA---NQIDPTGAGDSFLGGLVT 245 (353)
Q Consensus 193 ---------~~~----~~---------~~~~vvvT~G~~Ga~~~~--~~~~~~~pa~~v---~~vDttGAGDaF~agfl~ 245 (353)
.++ +. +++.||||+|++|+++++ +++.+++|++++ +++|||||||+|+|||++
T Consensus 249 g~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~ag~l~ 328 (370)
T 3vas_A 249 EVHGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIA 328 (370)
T ss_dssp HHTTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCSSCEEECCCCCCTTTCSCCTTHHHHHHHHHHH
T ss_pred cccCCCccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCCeEEEEecccccCCCcCCCCChHHHHHHHHHH
Confidence 222 11 678899999999999999 778899999987 889999999999999999
Q ss_pred HHHcCCCHHHHHHHHHHHHHHHhcccCCCCCCHH
Q 038564 246 GLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSR 279 (353)
Q Consensus 246 ~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~~~ 279 (353)
+|++|+++++|+++|+++|+++|++.|....+.+
T Consensus 329 ~l~~g~~l~~a~~~A~aaAa~~v~~~G~~~p~~~ 362 (370)
T 3vas_A 329 DYIRGKPMITSLHAAVKAAAYIICRSGFSLGSRD 362 (370)
T ss_dssp HHTTTCCHHHHHHHHHHHHHHHHTSSSSCCCCGG
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHcccCCcCCCCc
Confidence 9999999999999999999999999995333333
No 28
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=1.1e-36 Score=286.93 Aligned_cols=267 Identities=21% Similarity=0.250 Sum_probs=210.0
Q ss_pred ccEEEEccceeeeeecc----------C-----------cccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----
Q 038564 8 HGILIVGNYCHDVLIRN----------G-----------TVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY---- 62 (353)
Q Consensus 8 ~~ilviG~~~iD~~~~~----------~-----------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g---- 62 (353)
|+|+|+|++++|++... + ......+||++.|+|+++++||.++.++|.+|+| .|
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~i~~ 89 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FADYRD 89 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHHHHH
T ss_pred CeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHHHHH
Confidence 58999999999999765 2 1356689999999999999999999999999999 54
Q ss_pred -----Ccccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCcc--ccccceeeecCCCcHHHHH
Q 038564 63 -----ETSYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGK--FDYGMAVGVGGEILPETLE 134 (353)
Q Consensus 63 -----~vd~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~--~~~~~~~~~~~~~~~~~~~ 134 (353)
+|+++++.. ++.+|+.+.+.++. ++++.+....++...++++++.... +...+++++++.. ++.+.
T Consensus 90 ~L~~~gV~~~~v~~~~~~~T~~~~~~~~~-----~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~~ 163 (334)
T 2pkf_A 90 WLKARGVNCDHVLISETAHTARFTCTTDV-----DMAQIASFYPGAMSEARNIKLADVVSAIGKPELVIIGAND-PEAMF 163 (334)
T ss_dssp HHHTTTEECTTCEECSSCCCEEEEEEECT-----TCCEEEEEECGGGGGGGGCCHHHHHHHHCSCSEEEEESCC-HHHHH
T ss_pred HHHHCCCceeeeEecCCCCceEEEEEEcC-----CCCEEEEECCchhhhCCHhhcChhhhhhcCCCEEEEcCCC-hHHHH
Confidence 388888754 56789988887763 3455554455666666666664321 3567778887654 57777
Q ss_pred HHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC------CHHHH-hccCeEEEeeC
Q 038564 135 KMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM------DVEEV-RKLCCVVVTNG 207 (353)
Q Consensus 135 ~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l------~~~~~-~~~~~vvvT~G 207 (353)
++++.++. .+...++||+.+...+ ..+.+.++++++|++++|++|+..+ +.+++ .+++.||||+|
T Consensus 164 ~~~~~a~~-----~g~~v~~D~~~~~~~~---~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~~~~l~~~~~~vvvt~G 235 (334)
T 2pkf_A 164 LHTEECRK-----LGLAFAADPSQQLARL---SGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWSEADVMAQIDLRVTTLG 235 (334)
T ss_dssp HHHHHHHH-----HTCCEEEECGGGGGTS---CHHHHHTTTTTCSEEEEEHHHHHHHHHHHCCCHHHHHTTCSCEEEECG
T ss_pred HHHHHHHh-----cCCeEEEeccchhhhh---hHHHHHHHHhcCCEEecCHHHHHHHhccCCCCHHHHHhcCCEEEEEeC
Confidence 78877764 3555677876543222 2345778999999999999999876 23333 24789999999
Q ss_pred CCceEEEEcCc-eEEEcCcccc-ccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHH
Q 038564 208 REGSEVYYRDG-KVKVSPFLAN-QIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLP--KFDSRVLQR 283 (353)
Q Consensus 208 ~~Ga~~~~~~~-~~~~pa~~v~-~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~--~~~~~~~~~ 283 (353)
++|++++++++ .+++|+++++ ++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.. ..+.+++++
T Consensus 236 ~~G~~~~~~~~~~~~~~~~~v~~vvDttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 315 (334)
T 2pkf_A 236 PKGVDLVEPDGTTIHVGVVPETSQTDPTGVGDAFRAGFLTGRSAGLGLERSAQLGSLVAVLVLESTGTQEWQWDYEAAAS 315 (334)
T ss_dssp GGCEEEECTTSCEEEECCCCCSCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSCCCCCHHHHHH
T ss_pred CCCeEEEeCCCcEEEeCCcCCCCCCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCCCCcCCCCHHHHHH
Confidence 99999998877 8999999987 6899999999999999999999999999999999999999999952 456888888
Q ss_pred HHhHhh
Q 038564 284 VKDEVQ 289 (353)
Q Consensus 284 ~~~~i~ 289 (353)
++++..
T Consensus 316 ~l~~~~ 321 (334)
T 2pkf_A 316 RLAGAY 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 29
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=3.2e-37 Score=292.08 Aligned_cols=255 Identities=15% Similarity=0.151 Sum_probs=205.0
Q ss_pred CcccEEEEccceeeeeeccCc-------------------------------ccccccCChHHHHHHHHHhC----CCC-
Q 038564 6 SNHGILIVGNYCHDVLIRNGT-------------------------------VLAETLGGAASFISNVLNGL----SIS- 49 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~-------------------------------~~~~~~GG~a~N~A~~la~L----G~~- 49 (353)
+..+|+++|++++|++...+. .....+||++.|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 457899999999999988763 35679999999999999999 999
Q ss_pred eEEEEEecCCCCCC----------cccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCC----cc
Q 038564 50 CSLIAKVGHDFKYE----------TSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPD----GK 115 (353)
Q Consensus 50 v~~ig~vG~D~~g~----------vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~----~~ 115 (353)
+.++|.||+|.+|+ |+++++..++.+|+.+.+.++ +++++++...+++..++++++.. ..
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~T~~~~i~~~------~g~r~~~~~~ga~~~~~~~~~~~~~~~~~ 159 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEHEGIVMAVEHTTKAGSGACAVCIT------GKERTLVADLGAANHLSSEHMRSPAVVRA 159 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHHHTCEECCEECSSSCEEEEEEEEE------TTEEEEEEEEEGGGGCCHHHHTSHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHHCCCceecccCCCCCCeEEEEEEE------CCceeeeechhhhhcCCHHHcCchhhHHH
Confidence 99999999998773 888888767778998888775 35667777778877888887765 23
Q ss_pred ccccceeeecC---CCcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC-
Q 038564 116 FDYGMAVGVGG---EILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM- 191 (353)
Q Consensus 116 ~~~~~~~~~~~---~~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l- 191 (353)
+..++++++.+ +.+++.+.++++.++. .+....+|+.. +.+.....+.+.++++++|++++|++|++.+
T Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~-----~g~~v~~d~~~--~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~ 232 (347)
T 3otx_A 160 MDESRIFYFSGFTLTVDVNHVLQACRKARE-----VDGLFMINLSA--PFIMQFFSAQLGEVLPYTDIIVANRHEAKEFA 232 (347)
T ss_dssp HHHCSEEEEEGGGGGTCHHHHHHHHHHHHH-----TTCEEEEECCC--HHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHH
T ss_pred HhhCCEEEEeeeecccCHHHHHHHHHHHHH-----hCCEEEeeCch--hhhHHHHHHHHHHHHhhCCEEecCHHHHHHHh
Confidence 55677777753 3567888999998875 45555666532 1111111345778999999999999999875
Q ss_pred --------CHHHH------------hccCeEEEeeCCCceEEEEcCceEEEcCccc---cccCCCCCchHHHHHHHHHHH
Q 038564 192 --------DVEEV------------RKLCCVVVTNGREGSEVYYRDGKVKVSPFLA---NQIDPTGAGDSFLGGLVTGLV 248 (353)
Q Consensus 192 --------~~~~~------------~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v---~~vDttGAGDaF~agfl~~l~ 248 (353)
+.+++ .+++.||||+|++|++++++++.+++|++++ ++||||||||+|+|||+++|+
T Consensus 233 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~vvDttGAGDaF~ag~l~~l~ 312 (347)
T 3otx_A 233 NMMKWDTDCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKDGVETVPVPQLDQDKVIDMNGAGDAFMGGFLSAYA 312 (347)
T ss_dssp HHHTCCCCCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETTEEEEECCCCCCGGGCCSSCCSHHHHHHHHHHHHT
T ss_pred cccCCCcCCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECCeEEEEEecccCCCCCCCCCChHHHHHHHHHHHHH
Confidence 22321 2467999999999999999888889998877 789999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 249 QGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 249 ~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
+|+++++|+++|+++|+++|++.|.
T Consensus 313 ~g~~l~~a~~~a~~~aa~~v~~~G~ 337 (347)
T 3otx_A 313 VGKDLRRCCETGHYTAQEVIQRDGC 337 (347)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTCC--
T ss_pred cCCCHHHHHHHHHHHHHHHHcccCC
Confidence 9999999999999999999999993
No 30
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-37 Score=294.78 Aligned_cols=256 Identities=16% Similarity=0.180 Sum_probs=200.8
Q ss_pred CCcccEEEEccceeeeeeccCc-------------------------------ccccccCChHHHHHHHHHhC---CCCe
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT-------------------------------VLAETLGGAASFISNVLNGL---SISC 50 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~-------------------------------~~~~~~GG~a~N~A~~la~L---G~~v 50 (353)
+++.+|+++|++++|++...+. .....+||++.|+|+++++| |.++
T Consensus 21 ~~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~ 100 (365)
T 3loo_A 21 LRDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTA 100 (365)
T ss_dssp CCTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSE
T ss_pred CCCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcE
Confidence 4456899999999999988764 24578999999999998876 9999
Q ss_pred EEEEEecCCCCCC----------cccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCC----ccc
Q 038564 51 SLIAKVGHDFKYE----------TSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPD----GKF 116 (353)
Q Consensus 51 ~~ig~vG~D~~g~----------vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~----~~~ 116 (353)
.++|.||+|.+|+ |+++++..++.+|+.+.+.++ +++++++.+.+++..+++++++. ..+
T Consensus 101 ~~ig~vG~D~~g~~~~~~l~~~GV~~~~~~~~~~~Tg~~~i~~~------~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~ 174 (365)
T 3loo_A 101 IFFGCVGQDEYARILEERATSNGVNVQYQRSATSPTGTCAVLVT------GTQRSLCANLAAANDFTPEHLRSDGNRAYL 174 (365)
T ss_dssp EEEEEEESBHHHHHHHHHHHHHTCEEEEEEESSSCCEEEEEEEE------TTEEEEEEECGGGGGCCGGGGGSHHHHHHH
T ss_pred EEEEEecCCchHHHHHHHHHHCCCceeccccCCCCCeEEEEEEE------CCceEEEeccchHhhCCHhHcCchhhHHHH
Confidence 9999999998773 899888767779999888875 24566777788888888888865 235
Q ss_pred cccceeeecC---CCcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC--
Q 038564 117 DYGMAVGVGG---EILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM-- 191 (353)
Q Consensus 117 ~~~~~~~~~~---~~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l-- 191 (353)
..++++++.+ +.+++.+.++++.++. .+....+|+.. +.+.....+.+.++++++|++++|++|++.+
T Consensus 175 ~~~~~v~i~G~~~~~~~~~~~~~~~~a~~-----~g~~v~~d~~~--~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g 247 (365)
T 3loo_A 175 QGAQFFYVSGFFFTVSFESALSVAKEAAA-----TGRMFMMNLSA--PFVPQFYKNNLEEIFPYVDVLFGNETEAIALAK 247 (365)
T ss_dssp HHCSEEEEEGGGHHHHHHHHHHHHHHHHH-----TTCEEEEECCS--THHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHH
T ss_pred hhCCEEEEeeeeccCCHHHHHHHHHHHHH-----cCCEEEEECCc--hhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhc
Confidence 5677777764 2356778888888875 45555666532 1111112345778899999999999999875
Q ss_pred -------CHHHH----h--------ccCeEEEeeCCCceEEE--EcCceEEEcCccc---cccCCCCCchHHHHHHHHHH
Q 038564 192 -------DVEEV----R--------KLCCVVVTNGREGSEVY--YRDGKVKVSPFLA---NQIDPTGAGDSFLGGLVTGL 247 (353)
Q Consensus 192 -------~~~~~----~--------~~~~vvvT~G~~Ga~~~--~~~~~~~~pa~~v---~~vDttGAGDaF~agfl~~l 247 (353)
+.+++ . +++.||||+|++|++++ ++++.+++|++++ ++||||||||+|+|||+++|
T Consensus 248 ~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaF~agfl~~l 327 (365)
T 3loo_A 248 EFNYGTEDLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTDNVREFPVQKLAPEQMVDTNGAGDAFVGGFLAQL 327 (365)
T ss_dssp HTTCCCCCHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCSCCEEECCCCCC------CTTHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCCeEEEEeccccCCCCccCCCChHHHHHHHHHHHH
Confidence 22222 1 56899999999999999 6677889999987 78999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 248 VQGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 248 ~~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
++|+++++|+++|+++|+++|++.|.
T Consensus 328 ~~g~~l~~a~~~a~~~Aa~~v~~~G~ 353 (365)
T 3loo_A 328 LQSRTVDVCIKCGIWAAREIIQRSGC 353 (365)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHGGG
T ss_pred HCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999994
No 31
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=6.2e-37 Score=288.08 Aligned_cols=258 Identities=16% Similarity=0.105 Sum_probs=200.1
Q ss_pred CCcccEEEEccceeeeeecc-CcccccccCChHHHHHHHHHhC--CCCeEEEEEecCCCCCC----------cccceeec
Q 038564 5 HSNHGILIVGNYCHDVLIRN-GTVLAETLGGAASFISNVLNGL--SISCSLIAKVGHDFKYE----------TSYRPIIV 71 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~-~~~~~~~~GG~a~N~A~~la~L--G~~v~~ig~vG~D~~g~----------vd~~~v~~ 71 (353)
.+|++|+|+|++++|++... +..+...+||++.|+|++|++| |.++.++|.+|+|.+|+ |+++++..
T Consensus 21 ~~m~~i~viG~~~iD~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~ 100 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPADLPGTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSAAGIDGGGLRV 100 (328)
T ss_dssp BSSCEEEEESCCEEEEEECSSTTEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHHTTEECTTCEE
T ss_pred ccCCcEEEecCcEEEEecCCCCCceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHHcCCccceEEE
Confidence 35679999999999999873 3467789999999999999999 89999999999998773 88888754
Q ss_pred -CCCCCeEEEEEecccCCCCCCccEEEeecCCCC---CCCCCCCCCccccccceeeecC-------CCcHHHHHHHHHHh
Q 038564 72 -PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCE---PITPSDLPDGKFDYGMAVGVGG-------EILPETLEKMLEIC 140 (353)
Q Consensus 72 -~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~---~l~~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a 140 (353)
++.+|+.+++.++ .++++++...+... .++..++....+...+++++++ +.+.+.+.++++.+
T Consensus 101 ~~~~~T~~~~v~~~------~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~~a 174 (328)
T 4e69_A 101 IPGRTVGLYLITLE------QGERSFAYWRGQSAARELAGDADALAAAMARADVVYFSGITLAILDQCGRATLLRALAQA 174 (328)
T ss_dssp CTTCCCEEEEEEEE------TTEEEEEEECTTCGGGGTTSCHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEec------CCceEEEEeCCCCHHHhhcCccccchHHhcCCCEEEECCchhhccCchHHHHHHHHHHHH
Confidence 5668988887775 24566655544321 1222222223355567777753 33456777888877
Q ss_pred hhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeCC
Q 038564 141 NVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNGR 208 (353)
Q Consensus 141 ~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G~ 208 (353)
+. .+...++||+.+...|.... .+.+.++++++|++++|++|++.+ +.+++ .+++.||||+|+
T Consensus 175 ~~-----~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~G~ 249 (328)
T 4e69_A 175 RA-----TGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGDAGPDATADRYARAGVRSVVVKNGP 249 (328)
T ss_dssp HH-----TTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTCSSHHHHHHHHHTTTCSEEEEBCTT
T ss_pred Hh-----CCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCCCCHHHHHHHHHhcCCCEEEEEeCC
Confidence 75 46667888876544332211 234667899999999999999876 33332 247899999999
Q ss_pred CceEEEEcCceEEEcCcc-ccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 209 EGSEVYYRDGKVKVSPFL-ANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 209 ~Ga~~~~~~~~~~~pa~~-v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
+|++++++++.+++|+++ ++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.
T Consensus 250 ~G~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~l~~a~~~A~~~aa~~v~~~Ga 315 (328)
T 4e69_A 250 HAVHFLQDGRRGRVPVPPVAQVVDTTAAGDSFNAGLLDSVLAGQPLETAIAAAAALAGQVVQGKGA 315 (328)
T ss_dssp SCEEEEETTEEEEECCCCCCSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSS
T ss_pred CCeEEEeCCceEEecCCCCCCccCCCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHccCCC
Confidence 999999998899999986 78999999999999999999999999999999999999999999994
No 32
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=4.7e-36 Score=280.21 Aligned_cols=268 Identities=20% Similarity=0.289 Sum_probs=200.0
Q ss_pred CcccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCC-CeEEEEEecCCCCCC----------cccceeec-CC
Q 038564 6 SNHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSI-SCSLIAKVGHDFKYE----------TSYRPIIV-PT 73 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~-~v~~ig~vG~D~~g~----------vd~~~v~~-~~ 73 (353)
|+++|+|+|++++|++..+.......+||++.|+|+++++||. ++.++|.+|+| +|+ ||++++.. ++
T Consensus 1 M~~~ilviG~~~iD~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~~gVd~~~v~~~~~ 79 (313)
T 3kd6_A 1 MSLSLLVIGSLAFDDIETPFGRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHAKNIDTRGIQVIED 79 (313)
T ss_dssp --CCEEEESCCEEEEEECSSCEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHHTTEEEEEEEEETT
T ss_pred CCccEEEEeEEEEeeecCCCCcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHHcCCCccceEEcCC
Confidence 4578999999999999876666788999999999999999999 99999999999 773 88988864 55
Q ss_pred CCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHHHhhhhhcccccceEE
Q 038564 74 SKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLEICNVVLVDIQSVIRV 153 (353)
Q Consensus 74 ~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~D~~g~~~~ 153 (353)
.+|....-.+.. .....+.+....++...+.+. + ...+...+++++. .++++...++++.++ .+...+
T Consensus 80 ~~T~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~v~~~-~~~~~~~~~~~~~~~------~~~~v~ 147 (313)
T 3kd6_A 80 GKTFRWAGRYHY---DMNTRDTLDTQLNVFAEFDPH-V-PQYYRDSKFVCLG-NIDPELQLKVLDQID------DPKLVV 147 (313)
T ss_dssp CCCEEEEEEECT---TSSCEEEEEEECGGGTTCCCC-C-CGGGTTCSEEEEC-SSCHHHHHHHHTTCS------SCSEEE
T ss_pred CCeeeeeeeeec---cccccceeecccchHhhcCcc-c-hHHHccCCEEEEc-CCCHHHHHHHHHHHh------hCCEEE
Confidence 677433222211 112233333334444444442 2 2235567777774 466676666666553 344556
Q ss_pred EecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeCCCceEEEEcCceEEEc
Q 038564 154 FDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNGREGSEVYYRDGKVKVS 223 (353)
Q Consensus 154 ~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G~~Ga~~~~~~~~~~~p 223 (353)
+||.. .|.....+.+.++++++|++++|++|++.+ +.+++ .+++.|+||+|++|++++++++.+++|
T Consensus 148 ~Dp~~---~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~ 224 (313)
T 3kd6_A 148 CDTMN---FWIEGKPEELKKVLARVDVFIVNDSEARLLSGDPNLVKTARIIREMGPKTLIIKKGEHGALLFTDNGIFAAP 224 (313)
T ss_dssp EECCH---HHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHSCSCHHHHHHHHHTTSCSEEEEECTTSCEEEEETTEEEEEC
T ss_pred EcChh---hhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhCCCCHHHHHHHHHHcCCCEEEEeeCCCcEEEEECCceEEeC
Confidence 77621 011112345678899999999999999876 33332 247899999999999999998899999
Q ss_pred Cccc-cccCCCCCchHHHHHHHHHHHcCC-----CHHHHHHHHHHHHHHHhcccCCC---CCCHHHHHHHHhHhh
Q 038564 224 PFLA-NQIDPTGAGDSFLGGLVTGLVQGL-----AVPDAALLGNFFGSITVAQIGLP---KFDSRVLQRVKDEVQ 289 (353)
Q Consensus 224 a~~v-~~vDttGAGDaF~agfl~~l~~g~-----~~~~Al~~A~a~Aa~~v~~~G~~---~~~~~~~~~~~~~i~ 289 (353)
++++ +++|||||||+|+|||+++|++|+ ++++|+++|+++|+++|++.|.. .++.+++++++++..
T Consensus 225 ~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~ev~~~l~~~~ 299 (313)
T 3kd6_A 225 AFPLESIYDPTGAGDTFAGGFIGHLARCGNTSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLEVDDRYQSFL 299 (313)
T ss_dssp CCTTCCCSCCTTHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCccHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHHHHHHHHHHH
Confidence 9998 799999999999999999999998 89999999999999999999963 468899988887664
No 33
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=6.6e-37 Score=288.17 Aligned_cols=250 Identities=20% Similarity=0.206 Sum_probs=202.5
Q ss_pred cccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccc
Q 038564 7 NHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETS 65 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd 65 (353)
|++|+|+|++++|++...++ .....+||+++|+|++|++||.++.++|.+|+|.+| +|+
T Consensus 24 ~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~~Gv~ 103 (331)
T 2fv7_A 24 VAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDIS 103 (331)
T ss_dssp CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHTTTEE
T ss_pred cCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHHcCCc
Confidence 46899999999999976421 356789999999999999999999999999999766 388
Q ss_pred cceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc--cccccceeeecCCCcHHHHHHHHHHhhh
Q 038564 66 YRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG--KFDYGMAVGVGGEILPETLEKMLEICNV 142 (353)
Q Consensus 66 ~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 142 (353)
++++.. ++.+|+.+++.++. +++++++...+++..+++++++.. .+...+++++..+.+.+.+..+++.++.
T Consensus 104 ~~~v~~~~~~~T~~~~v~~~~-----~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a~~ 178 (331)
T 2fv7_A 104 TEFTYQTKDAATGTASIIVNN-----EGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMARR 178 (331)
T ss_dssp CTTEEEESSSCCEEEEEEECT-----TSCEEEEEECGGGGGCCHHHHHHTHHHHHHCSEEEECSSSCHHHHHHHHHHHHH
T ss_pred ceeeEecCCCCCceEEEEECC-----CCCeEEEecCCccccCCHHHHHHHHHhhccCCEEEEecCCCHHHHHHHHHHHHH
Confidence 888764 67789999888863 456667666777666777666432 2456778888888888888888888875
Q ss_pred hhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC---------HHHH------hccCeEEEeeC
Q 038564 143 VLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD---------VEEV------RKLCCVVVTNG 207 (353)
Q Consensus 143 v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~---------~~~~------~~~~~vvvT~G 207 (353)
.+...++||+.+.. ....++++++|++++|++|+..+. .+++ .+++.||||+|
T Consensus 179 -----~g~~v~~Dp~~~~~-------~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G 246 (331)
T 2fv7_A 179 -----SGVKTLFNPAPAIA-------DLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLG 246 (331)
T ss_dssp -----TTCEEEECCCSCCT-------TCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECG
T ss_pred -----cCCEEEEeCCcccc-------cchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEEC
Confidence 45566788765421 112357789999999999998751 1121 14689999999
Q ss_pred CCceEEEEcC--ceEEEcCccccccCCCCCchHHHHHHHHHHHcC--CCHHHHHHHHHHHHHHHhcccCC
Q 038564 208 REGSEVYYRD--GKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQG--LAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 208 ~~Ga~~~~~~--~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g--~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
++|+++++++ +.+++|+++++++|||||||+|+|||+++|++| +++++|+++|+++|+++|++.|.
T Consensus 247 ~~G~~~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~~~a~~~A~~~aa~~v~~~G~ 316 (331)
T 2fv7_A 247 AEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGT 316 (331)
T ss_dssp GGCEEEEESSCCSCEEECCCCCCCSCCTTHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHTSSSG
T ss_pred CCceEEEECCCCceeEecCCCCccCCCCCchHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999887 788999999999999999999999999999999 99999999999999999999994
No 34
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=2.3e-36 Score=284.45 Aligned_cols=263 Identities=14% Similarity=0.154 Sum_probs=203.6
Q ss_pred CCcccEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cc
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ET 64 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~v 64 (353)
..+|.++|+|++++|++...+. .....+||+++|+|+++++||.++.++|.+|+ .+| +|
T Consensus 18 ~~~Mi~~v~G~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~~gV 96 (330)
T 2jg1_A 18 GSHMILTLTLNPSVDISYPLTALKLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDHADI 96 (330)
T ss_dssp SSCCEEEEESSCEEEEEEEESCCCTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHHTTC
T ss_pred CCcEEEEEecchhheEEEecCCccCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHHCCC
Confidence 3456778999999999987542 45678999999999999999999999999996 455 38
Q ss_pred ccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc------cccccceeeecCCCc----HHHHH
Q 038564 65 SYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG------KFDYGMAVGVGGEIL----PETLE 134 (353)
Q Consensus 65 d~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~------~~~~~~~~~~~~~~~----~~~~~ 134 (353)
|++++...+ .|+...++++. + +++.+...++ .+++++++.. .+..++++++++..+ .+.+.
T Consensus 97 ~~~~v~~~~-~t~~~~~~v~~-----~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 167 (330)
T 2jg1_A 97 KHAFYNIKG-ETRNCIAILHE-----G-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYA 167 (330)
T ss_dssp EECCEEESS-CCEEEEEEEET-----T-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHH
T ss_pred ceeEEEccC-CCeeEEEEEeC-----C-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHH
Confidence 888886543 47777666653 3 4455554443 3555444321 135567777765443 46788
Q ss_pred HHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC---cccEeecCHHHHccCC-------HHH---H-----
Q 038564 135 KMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP---KIGFLKASSEEALFMD-------VEE---V----- 196 (353)
Q Consensus 135 ~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~Ea~~l~-------~~~---~----- 196 (353)
++++.++. .+...+|||+. ..+.++++ ++|++++|++|+..+. .++ +
T Consensus 168 ~~~~~a~~-----~g~~v~~D~~~----------~~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~ 232 (330)
T 2jg1_A 168 QIIERCQN-----KGVPVILDCSG----------ATLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPL 232 (330)
T ss_dssp HHHHHHHT-----TTCCEEEECCH----------HHHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGG
T ss_pred HHHHHHHH-----CCCEEEEECCc----------HHHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 88888875 45566777642 23455665 8999999999997651 122 1
Q ss_pred -hccCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCC
Q 038564 197 -RKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPK 275 (353)
Q Consensus 197 -~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~ 275 (353)
.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|...
T Consensus 233 ~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~G~~~ 312 (330)
T 2jg1_A 233 FEGIEWIIVSLGAQGAFAKHNHTFYRVNIPTISVLNPVGSGDSTVAGITSAILNHENDHDLLKKANTLGMLNAQEAQTGY 312 (330)
T ss_dssp GTTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSSC
T ss_pred HcCCCEEEEeecCCceEEEeCCCEEEEeCCCccccCCCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcCCCC
Confidence 1368999999999999999888899999999999999999999999999999999999999999999999999999766
Q ss_pred CCHHHHHHHHhHhhhee
Q 038564 276 FDSRVLQRVKDEVQRRK 292 (353)
Q Consensus 276 ~~~~~~~~~~~~i~~~~ 292 (353)
.+.++++++++++++++
T Consensus 313 ~~~~ev~~~~~~i~~~~ 329 (330)
T 2jg1_A 313 VNLNNYDDLFNQIEVLE 329 (330)
T ss_dssp CCGGGHHHHHTTCEEEE
T ss_pred CCHHHHHHHHhceEEEe
Confidence 67889999999887654
No 35
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1.2e-36 Score=284.98 Aligned_cols=256 Identities=16% Similarity=0.139 Sum_probs=195.1
Q ss_pred cccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCC----CCeEEEEEecCCCCC----------Ccccceeec-
Q 038564 7 NHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLS----ISCSLIAKVGHDFKY----------ETSYRPIIV- 71 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG----~~v~~ig~vG~D~~g----------~vd~~~v~~- 71 (353)
+++|+|+|++++|++... ..+...+||++.|+|+++++|| .++.++|.+|+|.+| +||++++..
T Consensus 4 ~~~i~viG~~~~D~~~~~-~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~~GV~~~~v~~~ 82 (319)
T 3lhx_A 4 SKKIAVIGECMIELSEKG-ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDTSLTQRM 82 (319)
T ss_dssp CEEEEEESCCEEEEEC----CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHTTTEECTTCEEC
T ss_pred cCceeeechhhhhhccCC-CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHHcCCCcceEEEc
Confidence 368999999999998765 3577899999999999999999 899999999999877 388888864
Q ss_pred CCCCCeEEEEEecccCCCCCCccEEEeecCC---CCCCCCCCCCC--ccccccceeeecC-------CCcHHHHHHHHHH
Q 038564 72 PTSKTTVFHAYFDSISAPSGHADRVLKRVCS---CEPITPSDLPD--GKFDYGMAVGVGG-------EILPETLEKMLEI 139 (353)
Q Consensus 72 ~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a---~~~l~~~~l~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 139 (353)
++.+|+.+++.++. +++++++...+. ...++++++.. ..+...+++++++ +.+.+.+.++++.
T Consensus 83 ~~~~T~~~~i~~~~-----~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~~~~~~~ 157 (319)
T 3lhx_A 83 ENRLPGLYYIETDS-----TGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKLLSLLRE 157 (319)
T ss_dssp TTCCCCEEEEEC---------CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCC-----CCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHHHHHHHH
Confidence 56788888887753 456666655442 22355554432 2355667777753 2234677888888
Q ss_pred hhhhhcccccceEEEecCCCccCCCCCC--hhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeC
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPLK--ESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNG 207 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~~--~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G 207 (353)
++. .+...++||+.+...|.... .+.+.++++++|++++|.+|++.+ +.+++ .+++.||||+|
T Consensus 158 a~~-----~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvt~G 232 (319)
T 3lhx_A 158 CRA-----KGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQQPVEDVIARTHNAGVKEVVVKRG 232 (319)
T ss_dssp HHH-----TTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCCCCHHHHHHHHHHTTCSEEEEEET
T ss_pred HHh-----cCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCCCCHHHHHHHHHhcCCCEEEEEEC
Confidence 775 56667888876543332111 234567889999999999999765 33332 24789999999
Q ss_pred CCceEEEEcCceE-EEcCc---cccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 208 REGSEVYYRDGKV-KVSPF---LANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 208 ~~Ga~~~~~~~~~-~~pa~---~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
++|++++++++.+ ++|++ +++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|.
T Consensus 233 ~~G~~~~~~~~~~~~~~~~~~~~~~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~Ga 302 (319)
T 3lhx_A 233 ADSCLVSIAGEALVDVPAVKLPKEKVIDTTAAGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGA 302 (319)
T ss_dssp TEEEEEEETTSCCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHTTSSSS
T ss_pred CCCeEEEECCcceEEcccccCCCCccCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhccCCC
Confidence 9999999987654 89986 567899999999999999999999999999999999999999999994
No 36
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=1.9e-35 Score=275.92 Aligned_cols=257 Identities=18% Similarity=0.200 Sum_probs=197.6
Q ss_pred CcccEEEEccceeeeeeccCc-----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------c
Q 038564 6 SNHGILIVGNYCHDVLIRNGT-----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------T 64 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~-----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------v 64 (353)
.+++|+++|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+|.+|+ |
T Consensus 16 ~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~~L~~~GV 95 (312)
T 2hlz_A 16 RGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLDDLRRYSV 95 (312)
T ss_dssp -CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHHTTC
T ss_pred CCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHHHHHHcCC
Confidence 457899999999999875321 2357899999999999999999999999999998773 8
Q ss_pred ccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHHHhhhh
Q 038564 65 SYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLEICNVV 143 (353)
Q Consensus 65 d~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 143 (353)
+++++.. ++.+|+..+++++. .+++++++...++...+++++++...+...+++++++. .++...++++.++..
T Consensus 96 ~~~~v~~~~~~~T~~~~~~v~~----~~g~r~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~-~~~~~~~~~~~a~~~ 170 (312)
T 2hlz_A 96 DLRYTVFQTTGSVPIATVIINE----ASGSRTILYYDRSLPDVSATDFEKVDLTQFKWIHIEGR-NASEQVKMLQRIDAH 170 (312)
T ss_dssp BCTTEEECSSCCCCEEEEEEET----TTCCEEEEEECCCCCCCCHHHHHTSCGGGEEEEEEECS-SHHHHHHHHHHHHHH
T ss_pred CCccceeccCCCCCeEEEEEEC----CCCceEEEecCCccccCCHHHhhHhhhccCCEEEEecc-CHHHHHHHHHHHHHh
Confidence 8888764 45677777666652 23566666666666777777665545667788888765 456666677666531
Q ss_pred --hcccc-cceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC---CHHHH----hc---c-CeEEEeeCCC
Q 038564 144 --LVDIQ-SVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM---DVEEV----RK---L-CCVVVTNGRE 209 (353)
Q Consensus 144 --~~D~~-g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l---~~~~~----~~---~-~~vvvT~G~~ 209 (353)
-+|+. +...++|+... .+.+.++++++|++++|++|+..+ +.+++ .+ . +.||||+|++
T Consensus 171 ~~~~~~~~~~~v~~d~~~~--------~~~~~~~l~~~dil~~n~~ea~~lg~~~~~~~~~~l~~~~~~g~~vvvt~G~~ 242 (312)
T 2hlz_A 171 NTRQPPEQKIRVSVEVEKP--------REELFQLFGYGDVVFVSKDVAKHLGFQSAEEALRGLYGRVRKGAVLVCAWAEE 242 (312)
T ss_dssp HTTSCGGGCCEEEEEECSC--------CGGGGGGGGSSSEEEECHHHHHHTTCCSHHHHHHHHGGGSCTTCEEEEECGGG
T ss_pred cccccCCCCeEEEEEcccc--------hHHHHHHHhcCCEEEEcHHHHHHcCCCCHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 11222 45567776431 235678899999999999999876 23332 11 2 7899999999
Q ss_pred ceEEEEcC-ceEEEcCcc-ccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCC
Q 038564 210 GSEVYYRD-GKVKVSPFL-ANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPK 275 (353)
Q Consensus 210 Ga~~~~~~-~~~~~pa~~-v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~ 275 (353)
|+++++++ ..+++|+++ ++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|+..
T Consensus 243 G~~~~~~~~~~~~~~~~~~~~vvdt~GAGDaf~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~ 310 (312)
T 2hlz_A 243 GADALGPDGKLLHSDAFPPPRVVDTLGAGDTFNASVIFSLSQGRSVQEALRFGCQVAGKKCGLQGFDG 310 (312)
T ss_dssp CEEEECTTCCEEEECCCCCSSCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSGG
T ss_pred CeEEEccCCCEEECCCCCCCCcccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhcCccc
Confidence 99998754 478899964 6899999999999999999999999999999999999999999999654
No 37
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=4.3e-36 Score=281.68 Aligned_cols=264 Identities=16% Similarity=0.176 Sum_probs=205.0
Q ss_pred cccEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cccc
Q 038564 7 NHGILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSY 66 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~ 66 (353)
+|.++|+|++++|++...++ .....+||++.|+|++|++||.++.++|.+|+| +| +|++
T Consensus 2 ~m~i~v~g~~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~~-~G~~i~~~L~~~gV~~ 80 (323)
T 2f02_A 2 SLIVTVTMNPSIDISYLLDHLKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGGF-HGAFIANELKKANIPQ 80 (323)
T ss_dssp CCEEEEESSCEEEEEEECSCCCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEHH-HHHHHHHHHHHTTCCB
T ss_pred ceEEEEecCceeEEEEecCCcccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEeccc-hHHHHHHHHHHCCCce
Confidence 47899999999999987542 456789999999999999999999999999975 55 3888
Q ss_pred ceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc------cccccceeeecCCCc----HHHHHHH
Q 038564 67 RPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG------KFDYGMAVGVGGEIL----PETLEKM 136 (353)
Q Consensus 67 ~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~------~~~~~~~~~~~~~~~----~~~~~~~ 136 (353)
+++...+ .|+....+++. + ++..+...++ .+++++++.. .+...+++++++..+ .+.+.++
T Consensus 81 ~~v~~~~-~t~~~~~~~~~-----~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 151 (323)
T 2f02_A 81 AFTSIKE-ETRDSIAILHE-----G-NQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQEL 151 (323)
T ss_dssp CCEEESS-CCEEEEEEEET-----T-EEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHH
T ss_pred eEEEcCC-CCeeEEEEEcC-----C-CeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHH
Confidence 8876543 46666666653 3 4445554443 3555544321 134567777765443 3677888
Q ss_pred HHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcC---CcccEeecCHHHHccC---C----H-HHH---------
Q 038564 137 LEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLL---PKIGFLKASSEEALFM---D----V-EEV--------- 196 (353)
Q Consensus 137 ~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l---~~~dvl~~n~~Ea~~l---~----~-~~~--------- 196 (353)
++.++. .+...++||... .+.+++ +++|++++|.+|++.+ . . +++
T Consensus 152 ~~~a~~-----~g~~v~~Dp~~~----------~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~ 216 (323)
T 2f02_A 152 VQKAHA-----QEVKVLLDTSGD----------SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMF 216 (323)
T ss_dssp HHHHHH-----TTCEEEEECCTH----------HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGG
T ss_pred HHHHHH-----CCCEEEEECChH----------HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHH
Confidence 888775 456667887531 234445 5899999999999765 1 1 221
Q ss_pred hccCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCC
Q 038564 197 RKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKF 276 (353)
Q Consensus 197 ~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~ 276 (353)
.+++.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|....
T Consensus 217 ~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~ 296 (323)
T 2f02_A 217 AGIEWIVISLGKDGAIAKHHDQFYRVKIPTIQAKNPVGSGDATIAGLAYGLAKDAPAAELLKWGMAAGMANAQERMTGHV 296 (323)
T ss_dssp TTCSEEEEECGGGCEEEEETTEEEEEECCCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSSSSSCC
T ss_pred cCCCEEEEeecCCceEEEeCCCEEEEcCCCccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCcCCC
Confidence 13689999999999999998888999999999999999999999999999999999999999999999999999997666
Q ss_pred CHHHHHHHHhHhhheeecc
Q 038564 277 DSRVLQRVKDEVQRRKLSC 295 (353)
Q Consensus 277 ~~~~~~~~~~~i~~~~~~~ 295 (353)
+.+++++++++++++++..
T Consensus 297 ~~~ev~~~~~~~~v~~~~~ 315 (323)
T 2f02_A 297 DVENVKKHLMNIQVVEIAK 315 (323)
T ss_dssp CHHHHHHHHTTCEEEECCC
T ss_pred CHHHHHHHhhcEEEEEhhh
Confidence 7899999999988776654
No 38
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=2.2e-36 Score=286.08 Aligned_cols=259 Identities=17% Similarity=0.220 Sum_probs=201.8
Q ss_pred CCCCCCcccEEEEccceeeeeeccCc-------------------------------ccccccCChHHHHHHHHHhCC--
Q 038564 1 MVRNHSNHGILIVGNYCHDVLIRNGT-------------------------------VLAETLGGAASFISNVLNGLS-- 47 (353)
Q Consensus 1 m~~~~~~~~ilviG~~~iD~~~~~~~-------------------------------~~~~~~GG~a~N~A~~la~LG-- 47 (353)
|.+. +.++|+|+|++++|++...+. .....+||+++|+|+++++||
T Consensus 1 ~~~~-~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~ 79 (345)
T 1bx4_A 1 MTSV-RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQ 79 (345)
T ss_dssp ---C-CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCS
T ss_pred CCCC-ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCC
Confidence 6666 667999999999999987653 345679999999999999996
Q ss_pred --CCeEEEEEecCCCCCC----------cccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCC-CCCC-
Q 038564 48 --ISCSLIAKVGHDFKYE----------TSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPS-DLPD- 113 (353)
Q Consensus 48 --~~v~~ig~vG~D~~g~----------vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~l~~- 113 (353)
.++.|+|.||+|.+|+ |+++++..++.+|+.+++.++ ++++.++...+++..++++ +++.
T Consensus 80 ~~~~~~~ig~vG~D~~G~~i~~~L~~~gv~~~~v~~~~~~T~~~~~~~~------~g~r~~~~~~~a~~~~~~~~~~~~~ 153 (345)
T 1bx4_A 80 PHKAATFFGCIGIDKFGEILKRKAAEAHVDAHYYEQNEQPTGTCAACIT------GDNRSLIANLAAANCYKKEKHLDLE 153 (345)
T ss_dssp STTCEEEEEEEESSHHHHHHHHHHHHTTCEEEEEEESSSCCCEEEEEEE------TTEEEEEEECGGGGGCCGGGTTTSH
T ss_pred CCCcEEEEEEeCCChhHHHHHHHHHHcCCceeeeecCCCCCceEEEEEc------CCceEeeeccchHhhcCcccccCcH
Confidence 9999999999998773 888888766778998888774 2455666677777778888 7763
Q ss_pred ---ccccccceeeecC---CCcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHH
Q 038564 114 ---GKFDYGMAVGVGG---EILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEE 187 (353)
Q Consensus 114 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~E 187 (353)
..+...+++++++ +++.+.+.++++.++. .+....+|+... .+.....+.+.++++++|++++|++|
T Consensus 154 ~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~a~~-----~g~~v~~d~~~~--~~~~~~~~~~~~~l~~~dil~~N~~E 226 (345)
T 1bx4_A 154 KNWMLVEKARVCYIAGFFLTVSPESVLKVAHHASE-----NNRIFTLNLSAP--FISQFYKESLMKVMPYVDILFGNETE 226 (345)
T ss_dssp HHHHHHHHCSEEEEEGGGGGTCHHHHHHHHHHHHH-----TTCEEEEECCSH--HHHHHTHHHHHHHGGGCSEEEEEHHH
T ss_pred HHHHHHhhCCEEEEEEEeccCCHHHHHHHHHHHHH-----cCCEEEEeCCcH--HHHHHHHHHHHHHhccCCEEeCCHHH
Confidence 2244566777643 4567888888888875 344455665321 11000123456789999999999999
Q ss_pred HccC---------CHHH----H--------hccCeEEEeeCCCceEEEEcCceEEEcCccc---cccCCCCCchHHHHHH
Q 038564 188 ALFM---------DVEE----V--------RKLCCVVVTNGREGSEVYYRDGKVKVSPFLA---NQIDPTGAGDSFLGGL 243 (353)
Q Consensus 188 a~~l---------~~~~----~--------~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v---~~vDttGAGDaF~agf 243 (353)
++.+ +.++ + .+++.||||+|++|++++++++.+++|++++ +++|||||||+|+|||
T Consensus 227 ~~~l~g~~~~~~~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~~~vvDttGAGDaf~ag~ 306 (345)
T 1bx4_A 227 AATFAREQGFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGF 306 (345)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSSCEEEECCCCCCCTTCCCHHHHHHHHHHHH
T ss_pred HHHHhcccCCCCCCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECCeEEEEeccccCcCccccCCCcchHHHHHH
Confidence 9875 2222 1 1567999999999999998888899999887 7899999999999999
Q ss_pred HHHHHcCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 244 VTGLVQGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 244 l~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
+++|++|+++++|+++|+++|+++|++.|.
T Consensus 307 ~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~ 336 (345)
T 1bx4_A 307 LSQLVSDKPLTECIRAGHYAASIIIRRTGC 336 (345)
T ss_dssp HHHHTTTCCHHHHHHHHHHHHHHHTTSSSS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHhccCC
Confidence 999999999999999999999999999995
No 39
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=6.2e-36 Score=278.61 Aligned_cols=256 Identities=16% Similarity=0.150 Sum_probs=198.3
Q ss_pred CCcccEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------c
Q 038564 5 HSNHGILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------T 64 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------v 64 (353)
.++++|+|+|++++|++...+. .....+||+++|+|++|++||.++.++|.+|+| +|+ |
T Consensus 18 ~~~~~v~viG~~~iD~~~~~~~~p~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~~gV 96 (306)
T 3bf5_A 18 QGMRFLAYFGHLNIDVLISVDSIPREGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIESMGI 96 (306)
T ss_dssp -CCEEEEEECCCEEEEEEECSCCCSSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHHTTC
T ss_pred cCCCcEEEECCceEEEEEecCCCCCCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHHcCC
Confidence 3567899999999999975421 356789999999999999999999999999999 883 8
Q ss_pred ccceee-cCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecCCCcHHHHHHHHHHhhhh
Q 038564 65 SYRPII-VPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGGEILPETLEKMLEICNVV 143 (353)
Q Consensus 65 d~~~v~-~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v 143 (353)
+++++. .++.+|+.+++.++ . ++++++...+++..++ ++++ ...+++++.+.. .+.++++.++.
T Consensus 97 ~~~~v~~~~~~~T~~~~~~~~-----~-g~r~~~~~~ga~~~~~-~~l~----~~~~~v~~~~~~---~~~~~~~~a~~- 161 (306)
T 3bf5_A 97 NTGHVEKFEDESGPICYIATD-----G-KKQVSFMHQGAMAAWA-PQLA----DEYEYVHFSTGP---NYLDMAKSIRS- 161 (306)
T ss_dssp CCTTEEEETTCCCSEEEEEEC-----S-SCEEEEEECTHHHHCC-CCCC----SCEEEEEECSSS---SHHHHHHHCCS-
T ss_pred CchheEecCCCCCceEEEEEc-----C-CeeEEEEeCChhhhhh-Hhhc----CCCCEEEECChH---HHHHHHHHhCC-
Confidence 888875 56678998888875 2 4566666666655565 5553 456677777654 56667777662
Q ss_pred hcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCCHHHH---hccCeEEEeeCCCceEEEEcCceE
Q 038564 144 LVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMDVEEV---RKLCCVVVTNGREGSEVYYRDGKV 220 (353)
Q Consensus 144 ~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~~~~~---~~~~~vvvT~G~~Ga~~~~~~~~~ 220 (353)
..++||+.+. +....+.+.++++++|++++|++|++.+..... .+. .||||+|++|++++++++.+
T Consensus 162 -------~v~~D~~~~~---~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~l-~vvvT~G~~Ga~~~~~~~~~ 230 (306)
T 3bf5_A 162 -------KIIFDPSQEI---HKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSPKV-TTIVTNGERGSSLFMDGKKY 230 (306)
T ss_dssp -------EEEECCGGGG---GGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSCSS-CEEEEEGGGEEEEEETTEEE
T ss_pred -------cEEEcCchhh---hhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcccE-EEEEeecccCeEEEeCCcEE
Confidence 3455554321 111234567788999999999999987622110 022 29999999999999988889
Q ss_pred EEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcc--cCCC--CCCHHHHHHHHhHh
Q 038564 221 KVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQ--IGLP--KFDSRVLQRVKDEV 288 (353)
Q Consensus 221 ~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~--~G~~--~~~~~~~~~~~~~i 288 (353)
++|+++++ +|||||||+|+|||+++|++|+++++|+++|+++|+++|++ .|.. ..+.+++++++++.
T Consensus 231 ~~~~~~v~-vDttGAGDaF~ag~~~~l~~g~~~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev~~~~~~~ 301 (306)
T 3bf5_A 231 DFPAIPSS-GDTVGAGDSFRAGLYLALYNRRSIEKGMIYGTIIAHHVIDDGIENFSLNMEDLERETENYRRM 301 (306)
T ss_dssp EEECCCCC-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHHHHHHHHH
T ss_pred EecCCcCC-CCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCccccccCCCHHHHHHHHHhh
Confidence 99999999 99999999999999999999999999999999999999999 9952 34567888887764
No 40
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=1.8e-35 Score=275.60 Aligned_cols=259 Identities=15% Similarity=0.142 Sum_probs=201.7
Q ss_pred ccEE-EEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cccc
Q 038564 8 HGIL-IVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSY 66 (353)
Q Consensus 8 ~~il-viG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~ 66 (353)
.+|+ |.+++++|+++..++ .....+||++.|+|+++++||.++.++|.+|+| .| +|++
T Consensus 2 ~~i~~v~~n~~~D~~~~v~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~ 80 (309)
T 3umo_A 2 VRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV 80 (309)
T ss_dssp CCEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCE
T ss_pred CcEEEEecchhheEEEEcCcccCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCce
Confidence 4455 557899999988764 567899999999999999999999999999999 66 3888
Q ss_pred ceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc-----cccccceeeecCC----CcHHHHHHHH
Q 038564 67 RPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG-----KFDYGMAVGVGGE----ILPETLEKML 137 (353)
Q Consensus 67 ~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~-----~~~~~~~~~~~~~----~~~~~~~~~~ 137 (353)
+++...+ +|+....+++. .+++++++...++ .+++++++.. .+...+++++++. .+.+.+.+++
T Consensus 81 ~~v~~~~-~t~~~~~~~~~----~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (309)
T 3umo_A 81 ATVEAKD-WTRQNLHVHVE----ASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLI 153 (309)
T ss_dssp EEEECSS-CCCCCEEEEET----TTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHHHHHH
T ss_pred EEEEecC-CCeeEEEEEEC----CCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHHHHHH
Confidence 8886543 45544444442 2456666666654 3555554211 1234556666653 3568888888
Q ss_pred HHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCc--ccEeecCHHHHccCC---------HHHH----h--cc-
Q 038564 138 EICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPK--IGFLKASSEEALFMD---------VEEV----R--KL- 199 (353)
Q Consensus 138 ~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~--~dvl~~n~~Ea~~l~---------~~~~----~--~~- 199 (353)
+.++. .+...++||.. ..+.+++++ +|++++|++|++.+. .+++ . +.
T Consensus 154 ~~a~~-----~~~~v~~D~~~----------~~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~ 218 (309)
T 3umo_A 154 SAAQK-----QGIRCIVDSSG----------EALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA 218 (309)
T ss_dssp HHHHH-----TTCEEEEECCH----------HHHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSB
T ss_pred HHHHh-----cCCEEEEECCc----------HHHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCC
Confidence 88876 56667788742 245677776 599999999998761 1221 1 23
Q ss_pred CeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCCCHH
Q 038564 200 CCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSR 279 (353)
Q Consensus 200 ~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~~~ 279 (353)
+.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|....+.+
T Consensus 219 ~~vvvt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGD~f~a~~~~~l~~g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~ 298 (309)
T 3umo_A 219 KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCSHD 298 (309)
T ss_dssp SCEEEECGGGCEEEECSSCEEEECCCSCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSTTCCCCHH
T ss_pred cEEEEEcCcccEEEEECCcEEEEeCCCcCCCCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCCCCCHH
Confidence 78999999999999998899999999999999999999999999999999999999999999999999999998777899
Q ss_pred HHHHHHhHhh
Q 038564 280 VLQRVKDEVQ 289 (353)
Q Consensus 280 ~~~~~~~~i~ 289 (353)
+++++++++.
T Consensus 299 ev~~~l~~~~ 308 (309)
T 3umo_A 299 DTQKIYAYLS 308 (309)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999874
No 41
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=9.6e-36 Score=280.26 Aligned_cols=263 Identities=14% Similarity=0.090 Sum_probs=203.5
Q ss_pred cccEEEEccceeeeeeccCc-------------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------C
Q 038564 7 NHGILIVGNYCHDVLIRNGT-------------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------E 63 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~-------------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~ 63 (353)
.|.++|+|++++|++...++ .....+||+++|+|++|++||.++.++|.+|+| +| +
T Consensus 12 ~~~~~v~G~~~vD~~~~~~~~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~~~g 90 (331)
T 2ajr_A 12 HMVLTVTLNPALDREIFIEDFQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELRKIS 90 (331)
T ss_dssp CCEEEEESSCEEEEEEECTTCCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHHHHC
T ss_pred ceEEEEecchHHeEEEEcCCccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcC
Confidence 57899999999999986542 345679999999999999999999999999998 55 5
Q ss_pred --cccceeecCCCCCeEEEEEecccCCCCCCcc-EEEeecCCCCCCCCCCCCCc------cccccceeeecCCCc----H
Q 038564 64 --TSYRPIIVPTSKTTVFHAYFDSISAPSGHAD-RVLKRVCSCEPITPSDLPDG------KFDYGMAVGVGGEIL----P 130 (353)
Q Consensus 64 --vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~l~~~~l~~~------~~~~~~~~~~~~~~~----~ 130 (353)
|+++++...+ .|+.+.++++. ++++ ..+...++ .+++++++.. .+..++++++++..+ .
T Consensus 91 ~~V~~~~v~~~~-~t~~~~~~v~~-----~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 162 (331)
T 2ajr_A 91 KLITTNFVYVEG-ETRENIEIIDE-----KNKTITAINFPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNE 162 (331)
T ss_dssp TTEEEEEEEESS-CCEEEEEEEET-----TTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCT
T ss_pred CccceEEEEcCC-CCeEEEEEEeC-----CCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCH
Confidence 8888876543 47766666653 3444 45544444 3555544321 234567777766554 3
Q ss_pred HHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC---cccEeecCHHH-HccCC------HHH---H-
Q 038564 131 ETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP---KIGFLKASSEE-ALFMD------VEE---V- 196 (353)
Q Consensus 131 ~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~---~~dvl~~n~~E-a~~l~------~~~---~- 196 (353)
+.+.++++.++. .+...+|||+. ..+.++++ ++|++++|++| ++.+. .++ +
T Consensus 163 ~~~~~~~~~a~~-----~g~~v~~D~~~----------~~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~ 227 (331)
T 2ajr_A 163 GICNELVRLARE-----RGVFVFVEQTP----------RLLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLA 227 (331)
T ss_dssp THHHHHHHHHHH-----TTCEEEEECCH----------HHHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHH-----cCCEEEEECCh----------HHHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHH
Confidence 678888888875 46666778752 12344554 49999999999 87762 122 1
Q ss_pred ----hccCeEEEeeCCCceEEEEcCceEEEc-CccccccCCCCCchHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHhcc
Q 038564 197 ----RKLCCVVVTNGREGSEVYYRDGKVKVS-PFLANQIDPTGAGDSFLGGLVTGLV-QGLAVPDAALLGNFFGSITVAQ 270 (353)
Q Consensus 197 ----~~~~~vvvT~G~~Ga~~~~~~~~~~~p-a~~v~~vDttGAGDaF~agfl~~l~-~g~~~~~Al~~A~a~Aa~~v~~ 270 (353)
..++.|+||+|++|++++++++.+++| +++++++|||||||+|+|||+++|+ +|+++++|+++|+++|+++|++
T Consensus 228 ~~l~~~~~~vvvT~G~~Ga~~~~~~~~~~~~~~~~v~vvDttGAGDaF~ag~l~~l~~~g~~~~~al~~A~a~aa~~v~~ 307 (331)
T 2ajr_A 228 EKLAEKSQVSVVSYEVKNDIVATREGVWLIRSKEEIDTSHLLGAGDAYVAGMVYYFIKHGANFLEMAKFGFASALAATRR 307 (331)
T ss_dssp HHHHHHSSEEEEEETTTEEEEECSSCEEEEEESSCCCGGGCTTHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHhcCEEEEeecCCceEEEeCCcEEEEecCCcccccCCCchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcC
Confidence 116899999999999999888888999 9999999999999999999999999 9999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHhHhhheee
Q 038564 271 IGLPKFDSRVLQRVKDEVQRRKL 293 (353)
Q Consensus 271 ~G~~~~~~~~~~~~~~~i~~~~~ 293 (353)
.|....+.+++++++++++++++
T Consensus 308 ~G~~~~~~~ev~~~~~~~~~~~~ 330 (331)
T 2ajr_A 308 KEKYMPDLEAIKKEYDHFTVERV 330 (331)
T ss_dssp SSCCCCCHHHHHTTGGGEEEEEC
T ss_pred cCcCCCCHHHHHHHHhhcEEEEC
Confidence 99766678999999988876653
No 42
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.4e-35 Score=274.46 Aligned_cols=251 Identities=20% Similarity=0.212 Sum_probs=186.4
Q ss_pred CcccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------cccceeec-CCC
Q 038564 6 SNHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TSYRPIIV-PTS 74 (353)
Q Consensus 6 ~~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd~~~v~~-~~~ 74 (353)
|+++|+|+|++++|+++. ...+||++.|+|+++++||.++.++|.+|+|.+|+ | +++.. ++.
T Consensus 2 m~~~v~viG~~~~D~~p~-----~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~~gv--~~v~~~~~~ 74 (296)
T 2qhp_A 2 MNNIIVGMGEALWDVLPE-----GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKEKQL--KNQIERVDY 74 (296)
T ss_dssp -CCEEEEESCCEEEEETT-----EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHHTTC--CEEEEEESS
T ss_pred CcceEEEEchhheEecCC-----CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHHcCC--CEEeecCCC
Confidence 456899999999999843 47899999999999999999999999999998763 6 55643 467
Q ss_pred CCeEEEEEecccCCCCCCccEEEeecCC-CCCCCCCCCCCccccccceeeecC-----CCcHHHHHHHHHHhhhhhcccc
Q 038564 75 KTTVFHAYFDSISAPSGHADRVLKRVCS-CEPITPSDLPDGKFDYGMAVGVGG-----EILPETLEKMLEICNVVLVDIQ 148 (353)
Q Consensus 75 ~T~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~l~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~~v~~D~~ 148 (353)
+|+.+.+.++. ++++++....+. ...+++.+.....+...+++++.+ +.+.+.+.++++.++.. .
T Consensus 75 ~T~~~~v~~~~-----~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a~~~----~ 145 (296)
T 2qhp_A 75 PTGTVQVTLDD-----EGVPCYEIKEGVAWDNIPFTDELKRLALNTRAVCFGSLAQRNEVSRATINRFLDTMPDI----D 145 (296)
T ss_dssp CCEEEEEC-----------CCEEECSSCGGGCCCCCHHHHHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHSCCT----T
T ss_pred CceEEEEEECC-----CCCEEEEEecCChhhhCCcchhhHhhhcCCCEEEECChHhcChHHHHHHHHHHHHHHhc----C
Confidence 89888777653 344444333332 334443322112344556666543 22456677777776520 1
Q ss_pred cceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC---------CHHHH-------hccCeEEEeeCCCceE
Q 038564 149 SVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM---------DVEEV-------RKLCCVVVTNGREGSE 212 (353)
Q Consensus 149 g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l---------~~~~~-------~~~~~vvvT~G~~Ga~ 212 (353)
+...++||+.+...+ ..+.+.++++++|++++|++|++.+ +.+++ .+++.||||+|++|++
T Consensus 146 ~~~v~~D~~~~~~~~---~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~~G~~ 222 (296)
T 2qhp_A 146 GQLKIFDINLRQDFY---TKEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGINGSY 222 (296)
T ss_dssp SCEEEEECCCCTTCC---CHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGGGCEE
T ss_pred CCEEEEECcCCcccc---CHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecCCCeE
Confidence 556788887654322 2345677889999999999999865 22221 1568999999999999
Q ss_pred EEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCC
Q 038564 213 VYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPK 275 (353)
Q Consensus 213 ~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~ 275 (353)
++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|...
T Consensus 223 ~~~~~~~~~~~~~~v~~vdttGAGD~f~a~~~~~l~~g~~~~~a~~~a~~~aa~~v~~~G~~~ 285 (296)
T 2qhp_A 223 VFTPGVVSFQETPKVPVADTVGAGDSFTAAFCASILNGKSVPEAHKLAVEVSAYVCTQSGAMP 285 (296)
T ss_dssp EEETTEEEEECCCCCCCSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSSSSSC
T ss_pred EEECCeEEEeCCCCCccccCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCCCCC
Confidence 999888899999999999999999999999999999999999999999999999999999543
No 43
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=6e-35 Score=271.99 Aligned_cols=257 Identities=15% Similarity=0.121 Sum_probs=191.6
Q ss_pred ccEE-EEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Cccc
Q 038564 8 HGIL-IVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSY 66 (353)
Q Consensus 8 ~~il-viG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~ 66 (353)
++|+ |.|++++|++...++ .....+||++.|+|+++++||.++.++|.+|+| +| +|++
T Consensus 2 ~~I~~v~g~~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~~gv~~ 80 (309)
T 3cqd_A 2 VRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLADENVPV 80 (309)
T ss_dssp CCEEEECSSCEEEEEEEESCCCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHHTTCCE
T ss_pred ceEEEEeccchheEEEEcCCCcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHHcCCCc
Confidence 3566 557999999987542 456789999999999999999999999999998 56 3888
Q ss_pred ceeecCCCCCeEEEEE-ecccCCCCCCccEEEeecCCCCCCCCCCCCC------ccccccceeeecCCC----cHHHHHH
Q 038564 67 RPIIVPTSKTTVFHAY-FDSISAPSGHADRVLKRVCSCEPITPSDLPD------GKFDYGMAVGVGGEI----LPETLEK 135 (353)
Q Consensus 67 ~~v~~~~~~T~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~------~~~~~~~~~~~~~~~----~~~~~~~ 135 (353)
+++...+ .|+...++ ++. +++++.+...++ .+++++++. ..+.. +++++++.. +.+.+.+
T Consensus 81 ~~v~~~~-~t~~~~~~~~~~-----~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 151 (309)
T 3cqd_A 81 ATVEAKD-WTRQNLHVHVEA-----SGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQ 151 (309)
T ss_dssp EEEECSS-CCCCCEEEEETT-----TCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHH
T ss_pred eeEEcCC-CCeeEEEEEEcC-----CCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHH
Confidence 8886543 35544455 553 345555555543 355544431 12344 666776544 3578888
Q ss_pred HHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcC-Ccc-cEeecCHHHHccCC---------HHHH------hc
Q 038564 136 MLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLL-PKI-GFLKASSEEALFMD---------VEEV------RK 198 (353)
Q Consensus 136 ~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l-~~~-dvl~~n~~Ea~~l~---------~~~~------~~ 198 (353)
+++.++. .+...++||... .+.+.+ +++ |++++|++|++.+. .+++ .+
T Consensus 152 ~~~~a~~-----~g~~v~~D~~~~----------~~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g 216 (309)
T 3cqd_A 152 LISAAQK-----QGIRCIVDSSGE----------ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSG 216 (309)
T ss_dssp HHHHHHT-----TTCEEEEECCHH----------HHHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTT
T ss_pred HHHHHHH-----cCCeEEEECChH----------HHHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcC
Confidence 8888775 455667786421 233333 788 99999999997651 1111 24
Q ss_pred -cCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCCC
Q 038564 199 -LCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFD 277 (353)
Q Consensus 199 -~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~ 277 (353)
++.|+||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+.++++.|....+
T Consensus 217 ~~~~vvvt~G~~G~~~~~~~~~~~~~~~~v~~vdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~~~aa~~~~~~G~~~~~ 296 (309)
T 3cqd_A 217 KAKRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMVRFGVAAGSAATLNQGTRLCS 296 (309)
T ss_dssp SBSCEEEECGGGCEEEECSSCEEEECCCSCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTC-----CCC
T ss_pred CCCEEEEEecCCceEEEECCceEEEeCCccccCCCcCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCcCCCCCC
Confidence 7899999999999999888888999999999999999999999999999999999999999999999999999976677
Q ss_pred HHHHHHHHhHhh
Q 038564 278 SRVLQRVKDEVQ 289 (353)
Q Consensus 278 ~~~~~~~~~~i~ 289 (353)
.+++++++++++
T Consensus 297 ~~~v~~~~~~~~ 308 (309)
T 3cqd_A 297 HDDTQKIYAYLS 308 (309)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhh
Confidence 899999998763
No 44
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=4.7e-36 Score=286.81 Aligned_cols=254 Identities=14% Similarity=0.160 Sum_probs=192.3
Q ss_pred cccEEEEccceeeeeeccCc-------------------------------ccccccCChHHHHHHHHHhCCCC---eEE
Q 038564 7 NHGILIVGNYCHDVLIRNGT-------------------------------VLAETLGGAASFISNVLNGLSIS---CSL 52 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~-------------------------------~~~~~~GG~a~N~A~~la~LG~~---v~~ 52 (353)
...|+.+|++.+|++...+. .....+||++.|+|+++++||.+ |.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 34599999999999987652 23457999999999999999965 899
Q ss_pred EEEecCCCCCC----------cccceeec-CCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc----ccc
Q 038564 53 IAKVGHDFKYE----------TSYRPIIV-PTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG----KFD 117 (353)
Q Consensus 53 ig~vG~D~~g~----------vd~~~v~~-~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~----~~~ 117 (353)
+|+||+|.+|+ |+++++.. ++.+|+.+.+..+ +++++++.+.+++..+++++++.. .+.
T Consensus 106 iG~VG~D~~G~~l~~~L~~~GV~~~~~~~~~~~~T~~~~v~~~------dgert~~~~~ga~~~l~~~~i~~~~~~~~i~ 179 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSALDLVTEFQIAEEPLMTGKVAVLVS------EKLRSMVTYLGAACDLSLAHIEQPHVWSLVE 179 (372)
T ss_dssp EEEECSSHHHHHHHHHHHHTTCEECCEECCTTCCEEEEEEEEC------SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHH
T ss_pred EeeecCCHHHHHHHHHHHHcCCCceeeeecCCCCceEEEEEcC------CCceEEEEeccchhhcchhhhhhhhHHHHhh
Confidence 99999998873 88888764 5556776666553 467778788888888888877652 244
Q ss_pred ccceeeecCC---CcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCC--
Q 038564 118 YGMAVGVGGE---ILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMD-- 192 (353)
Q Consensus 118 ~~~~~~~~~~---~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~-- 192 (353)
.++++++.+- ..++.+.++++.++. .+....+|++.. .+.....+.+.++++++|++++|++|+..+.
T Consensus 180 ~a~~~~~~g~~~~~~~~~~~~~~~~a~~-----~g~~v~ldls~~--~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~ 252 (372)
T 3uq6_A 180 KAQVYYIAGFVINTCYEGMLKIAKHSLE-----NEKLFCFNLSAP--FLSQFNTKEVDEMISYSNIVFGNESEAEAYGEV 252 (372)
T ss_dssp HCSEEEEEGGGHHHHHHHHHHHHHHHHH-----TTCEEEEECCCH--HHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHH
T ss_pred cccEEEEecccccccHHHHHHHHHHHHH-----cCCeEeeccccc--hhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCC
Confidence 5666666542 235666777777765 566667776431 1112224567788999999999999997651
Q ss_pred -------HHHH-------------hccCeEEEeeCCCceEEEEcCc----eEEEcCcc-ccccCCCCCchHHHHHHHHHH
Q 038564 193 -------VEEV-------------RKLCCVVVTNGREGSEVYYRDG----KVKVSPFL-ANQIDPTGAGDSFLGGLVTGL 247 (353)
Q Consensus 193 -------~~~~-------------~~~~~vvvT~G~~Ga~~~~~~~----~~~~pa~~-v~~vDttGAGDaF~agfl~~l 247 (353)
.+++ .+.+.||||+|++|++++++++ .+.+|+.+ .++||||||||+|+|||+++|
T Consensus 253 ~~~~~~~~~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l 332 (372)
T 3uq6_A 253 HGLLEDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADY 332 (372)
T ss_dssp TTCCSSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHH
T ss_pred CCCchhHHHHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHH
Confidence 1111 1246799999999999998653 23344444 468999999999999999999
Q ss_pred HcCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 248 VQGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 248 ~~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
++|+++++|+++|+++|+.+|++.|+
T Consensus 333 ~~g~~l~~a~~~a~~aAa~vv~~~Ga 358 (372)
T 3uq6_A 333 IRGKPMITSLHAAVKAAAYIICRSGF 358 (372)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHTSSSS
T ss_pred HcCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999995
No 45
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.2e-34 Score=274.73 Aligned_cols=270 Identities=15% Similarity=0.139 Sum_probs=205.5
Q ss_pred cccEEEEccceeeeeeccC------cccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCCC----------cccceee
Q 038564 7 NHGILIVGNYCHDVLIRNG------TVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKYE----------TSYRPII 70 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g~----------vd~~~v~ 70 (353)
.|+|+++|+.+.++..... ......+||+++|+|++|++||.++.++|.+|+|.+|+ |+++++.
T Consensus 12 ~~~~~~~ge~l~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~~gv~~~~v~ 91 (351)
T 2afb_A 12 HMKVVTFGEIMLRLSPPDHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRKFGVKTDYIA 91 (351)
T ss_dssp CCEEEEESCCEEEEECSTTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHHTTCBCTTEE
T ss_pred cceEEEechhhheecCCCCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHHcCCcceeEE
Confidence 5899999999999876443 24567899999999999999999999999999998763 8888886
Q ss_pred cCCCCCeEEEEEecccCCCCCCccEEEeec---CCCCCCCCCCCCCc-cccccceeeecCCC------cHHHHHHHHHHh
Q 038564 71 VPTSKTTVFHAYFDSISAPSGHADRVLKRV---CSCEPITPSDLPDG-KFDYGMAVGVGGEI------LPETLEKMLEIC 140 (353)
Q Consensus 71 ~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~---~a~~~l~~~~l~~~-~~~~~~~~~~~~~~------~~~~~~~~~~~a 140 (353)
..+.+|+.+++..+. ++++.++.+. .+...++++++... .+..++++++.+.. ..+.+.++++.+
T Consensus 92 ~~~~~t~~~~v~~~~-----~~r~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~a 166 (351)
T 2afb_A 92 RGGNRIGIYFLEIGA-----SQRPSKVVYDRAHSAISEAKREDFDWEKILDGARWFHFSGITPPLGKELPLILEDALKVA 166 (351)
T ss_dssp ECSSCCCEEEEECCB-----TTBCCEEEEECTTCTTTTCCGGGCCHHHHTTTEEEEEEETTSGGGSTTHHHHHHHHHHHH
T ss_pred ECCCcceEEEEEecC-----CCCcceEEEeCCCChhhhCChhhCCHHHhhcCCCEEEEeCcccccChhHHHHHHHHHHHH
Confidence 566788877765542 3333333322 23445666666532 24566777776433 237778888887
Q ss_pred hhhhcccccceEEEecCCCccCCCCC--ChhhhhhcCCcccEeecCHHHHccC---------------CH---HH----H
Q 038564 141 NVVLVDIQSVIRVFDSVDGTVNPVPL--KESGFYHLLPKIGFLKASSEEALFM---------------DV---EE----V 196 (353)
Q Consensus 141 ~~v~~D~~g~~~~~d~~~~~~~~~~~--~~~~~~~~l~~~dvl~~n~~Ea~~l---------------~~---~~----~ 196 (353)
+. .+...++||+.+...| .. ..+.+.++++++|++++|++|+..+ +. ++ +
T Consensus 167 ~~-----~g~~v~~Dp~~~~~~~-~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~l 240 (351)
T 2afb_A 167 NE-----KGVTVSCDLNYRARLW-TKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKIAEEV 240 (351)
T ss_dssp HH-----HTCEEEEECCCCTTTC-CHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHHHHHH
T ss_pred HH-----cCCEEEEeCCCchhcC-ChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHHHHHH
Confidence 75 4666788887653322 21 1244677899999999999999764 11 12 1
Q ss_pred ---hccCeEEEeeCCCce--------EEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 038564 197 ---RKLCCVVVTNGREGS--------EVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGS 265 (353)
Q Consensus 197 ---~~~~~vvvT~G~~Ga--------~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa 265 (353)
.+++.||||+|++|+ +++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+
T Consensus 241 ~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~~~~~~~~~~v~vvdttGAGDaF~ag~~~~l~~g~~l~~a~~~A~~~aa 320 (351)
T 2afb_A 241 TRKYNFKTVGITLRESISATVNYWSVMVFENGQPHFSNRYEIHIVDRVGAGDSFAGALIYGSLMGFDSQKKAEFAAAASC 320 (351)
T ss_dssp HHHHCCSEEEEEEEECSCSSEEEEEEEEEETTEEEECCCEEEECSCCTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeCCcCccccccceeEEEeCCcEEEcCCCCCccCCCCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 156899999999975 777777788999999999999999999999999999999999999999999999
Q ss_pred HHhcccCC-CCCCHHHHHHHHhH
Q 038564 266 ITVAQIGL-PKFDSRVLQRVKDE 287 (353)
Q Consensus 266 ~~v~~~G~-~~~~~~~~~~~~~~ 287 (353)
+++++.|. +.++.+++++++++
T Consensus 321 ~~v~~~G~~~~~~~~ev~~~l~~ 343 (351)
T 2afb_A 321 LKHTIPGDFVVLSIEEIEKLASG 343 (351)
T ss_dssp HHTTSSSSSCCCCHHHHHHHHTC
T ss_pred HHhCCCCCCCCCCHHHHHHHHhc
Confidence 99999995 55678888888765
No 46
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=7.5e-36 Score=283.26 Aligned_cols=256 Identities=18% Similarity=0.177 Sum_probs=193.1
Q ss_pred CCcccEEEEccceeeeeecc------C---------cccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC-------
Q 038564 5 HSNHGILIVGNYCHDVLIRN------G---------TVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY------- 62 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~------~---------~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g------- 62 (353)
+++++|+|+|++++|++... + ......+||+ +|+|+++++||.++.++|.+|+|..|
T Consensus 51 ~~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~L 129 (352)
T 4e84_A 51 LARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVELL 129 (352)
T ss_dssp HTTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHH
T ss_pred cCCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHHH
Confidence 45689999999999998751 1 1456789998 89999999999999999999999776
Q ss_pred ---CcccceeecCCCCCeEEEEEecccCCCCCCccEEEeec-CCCCCCCCCCCC--Cccccccceeeec--CCCcHHHHH
Q 038564 63 ---ETSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRV-CSCEPITPSDLP--DGKFDYGMAVGVG--GEILPETLE 134 (353)
Q Consensus 63 ---~vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~-~a~~~l~~~~l~--~~~~~~~~~~~~~--~~~~~~~~~ 134 (353)
+|++..+..++.+|+.+++.++. +++...+... +.+..+.++.+. ...+..+++++++ .+.+.+.+.
T Consensus 130 ~~~GV~~~~~~~~~~~T~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~ 204 (352)
T 4e84_A 130 GSSGVTPHLERDPALPTTIKLRVLAR-----QQQLLRVDFEAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKGGLTHVT 204 (352)
T ss_dssp TTTSCEEEEEEETTSCCCEEEEEEES-----SCEEEEEEECCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSSCSSHH
T ss_pred HHcCCceeeEECCCCCCceEEEEEcC-----CceEEEEEcCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCHHHHH
Confidence 38885445677789988877753 2222223222 211111111111 1135567777776 333444577
Q ss_pred HHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC-----CHHH-------H---hcc
Q 038564 135 KMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM-----DVEE-------V---RKL 199 (353)
Q Consensus 135 ~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l-----~~~~-------~---~~~ 199 (353)
++++.++. .+...++||+.. ..++++++|++++|++|++.+ +.++ + .++
T Consensus 205 ~~~~~a~~-----~g~~v~~D~~~~-----------~~~~l~~~dil~pN~~Ea~~l~g~~~~~~~~~~~a~~l~~~~g~ 268 (352)
T 4e84_A 205 TMIEKARA-----AGKAVLVDPKGD-----------DWARYRGASLITPNRAELREVVGQWKSEDDLRARVANLRAELDI 268 (352)
T ss_dssp HHHHHHHH-----TTCEEEEECCSS-----------CCSTTTTCSEECCBHHHHHHHHCCCSSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHh-----cCCEEEEECCCc-----------chhhccCCcEEcCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCC
Confidence 77787775 566677887542 124678999999999998765 1222 1 257
Q ss_pred CeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCCCHH
Q 038564 200 CCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSR 279 (353)
Q Consensus 200 ~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~~~ 279 (353)
+.||||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.|....+.+
T Consensus 269 ~~VvvT~G~~Ga~~~~~~~~~~~pa~~v~vvDttGAGDaF~ag~l~~l~~g~~l~~al~~A~aaaa~~v~~~Ga~~~t~~ 348 (352)
T 4e84_A 269 DALLLTRSEEGMTLFSAGGELHAPALAREVFDVSGAGDTVIATVATMLGAGVPLVDAVVLANRAAGIVVGKLGTATVDYD 348 (352)
T ss_dssp SEEEEECGGGCEEEEETTEEEEECCCCSCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSSCCCCHH
T ss_pred CEEEEEcCCCcEEEEECCceEEecCCCcCccCCccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCCCccCCHH
Confidence 89999999999999998889999999999999999999999999999999999999999999999999999997666777
Q ss_pred HHH
Q 038564 280 VLQ 282 (353)
Q Consensus 280 ~~~ 282 (353)
+++
T Consensus 349 el~ 351 (352)
T 4e84_A 349 ELF 351 (352)
T ss_dssp HHT
T ss_pred Hhc
Confidence 664
No 47
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=6.2e-34 Score=264.70 Aligned_cols=257 Identities=19% Similarity=0.200 Sum_probs=198.0
Q ss_pred cEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccce
Q 038564 9 GILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRP 68 (353)
Q Consensus 9 ~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~ 68 (353)
-++|.|++++|++...++ .....+||++.|+|+++++||.++.++|.+|+ .+| +|++++
T Consensus 2 i~tvt~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~~gv~~~~ 80 (306)
T 2jg5_A 2 IYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNNSAIQSNF 80 (306)
T ss_dssp EEEEESSCEEEEEEECSSCCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEEecCceEEEEEEcCCcccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHHCCCceeE
Confidence 578999999999987652 45678999999999999999999999999999 455 388888
Q ss_pred eecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc--c---ccccceeeecCCCc----HHHHHHHHHH
Q 038564 69 IIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG--K---FDYGMAVGVGGEIL----PETLEKMLEI 139 (353)
Q Consensus 69 v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~--~---~~~~~~~~~~~~~~----~~~~~~~~~~ 139 (353)
+...+ .|+.++.+ . ++++..+...++ .+++++++.. . +...+++++.+..+ .+.+.++++.
T Consensus 81 v~~~~-~t~~~~~~-~------~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 150 (306)
T 2jg5_A 81 IEVDE-DTRINVKL-K------TGQETEINAPGP--HITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQI 150 (306)
T ss_dssp EECSS-CCEEEEEE-E------SSSEEEEECCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHH
T ss_pred EEcCC-CCeEEEEE-c------CCCEEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEeCCCCCCCChHHHHHHHHH
Confidence 86543 46665543 3 234555555443 3554443321 1 34466667665443 4677778887
Q ss_pred hhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC-cccEeecCHHHHccCC------HHH---H------hccCeEE
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP-KIGFLKASSEEALFMD------VEE---V------RKLCCVV 203 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~Ea~~l~------~~~---~------~~~~~vv 203 (353)
++. .+...++||.. ..+.++++ ++|++++|.+|++.+. .++ + .+++.|+
T Consensus 151 a~~-----~g~~v~~D~~~----------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vv 215 (306)
T 2jg5_A 151 TAQ-----TGAKLVVDAEK----------ELAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVI 215 (306)
T ss_dssp HHH-----HCCEEEEECCH----------HHHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEE
T ss_pred HHH-----CCCEEEEECCh----------HHHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 765 35556777642 23456676 6999999999997651 122 1 2468999
Q ss_pred EeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCCCHHHHHH
Q 038564 204 VTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSRVLQR 283 (353)
Q Consensus 204 vT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~~~~~~~ 283 (353)
||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++.| ..+.+++++
T Consensus 216 vt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaf~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~G--~~~~~ev~~ 293 (306)
T 2jg5_A 216 VSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDED--LATRDAIEK 293 (306)
T ss_dssp EECGGGCEEEECSSEEEEEECCCCCCCCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSS--SCCHHHHHH
T ss_pred EccCCCceEEEeCCcEEEEeCCcccccCCcChHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCCC--CCCHHHHHH
Confidence 999999999998888889999999999999999999999999999999999999999999999999999 556899999
Q ss_pred HHhHhhheee
Q 038564 284 VKDEVQRRKL 293 (353)
Q Consensus 284 ~~~~i~~~~~ 293 (353)
++++++++++
T Consensus 294 ~~~~~~~~~~ 303 (306)
T 2jg5_A 294 IKSQVTISVL 303 (306)
T ss_dssp HHTTCEEEEE
T ss_pred HHhceEEEEc
Confidence 9999887776
No 48
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=3.3e-34 Score=275.00 Aligned_cols=255 Identities=18% Similarity=0.194 Sum_probs=194.3
Q ss_pred cccEEEEccceeeeeeccCc------------------------------ccccccCChHHHHHHHHHhC---CCCeEEE
Q 038564 7 NHGILIVGNYCHDVLIRNGT------------------------------VLAETLGGAASFISNVLNGL---SISCSLI 53 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~------------------------------~~~~~~GG~a~N~A~~la~L---G~~v~~i 53 (353)
+++|+|+|++++|++...+. .....+||+++|+|+++++| |.++.|+
T Consensus 32 ~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~~i 111 (383)
T 2abs_A 32 PMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAGYM 111 (383)
T ss_dssp CCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEEEE
T ss_pred CceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEEEE
Confidence 46899999999999987543 23567999999999999999 8999999
Q ss_pred EEecCCCCCC----------cccceeecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceee
Q 038564 54 AKVGHDFKYE----------TSYRPIIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVG 123 (353)
Q Consensus 54 g~vG~D~~g~----------vd~~~v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~ 123 (353)
|.||+|.+|+ |+++++..++.+|+.+++.++ ++++.++...+++..+++++.....+..+++++
T Consensus 112 g~vG~D~~G~~i~~~L~~~GV~~~~v~~~~~~T~~~~~~~~------~g~r~~~~~~~a~~~l~~~~~~~~~l~~~~~v~ 185 (383)
T 2abs_A 112 GAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLIN------EKERTLCTHLGACGSFRLPEDWTTFASGALIFY 185 (383)
T ss_dssp EEECSSHHHHHHHHHHHHHTCEEEEEECTTCCCEEEEEEEE------TTEEEEEEECGGGGGCCCCTTHHHHTTTCCEEE
T ss_pred EEecCChhHHHHHHHHHHcCCceeeeecCCCCCeEEEEEEc------CCceeEeeccChhhhCChhhhhHHHhhcCCEEE
Confidence 9999998873 888888766679999888775 245566666777766776633222355566776
Q ss_pred ecC---CCcHHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC------C--
Q 038564 124 VGG---EILPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM------D-- 192 (353)
Q Consensus 124 ~~~---~~~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l------~-- 192 (353)
+.+ +.+.+.+.++++.++.- .+....+|+.. +.+.....+.+.++++++|++++|++|++.+ .
T Consensus 186 ~~g~~~~~~~~~~~~~~~~a~~~----~g~~v~~d~~~--~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~ 259 (383)
T 2abs_A 186 ATAYTLTATPKNALEVAGYAHGI----PNAIFTLNLSA--PFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAA 259 (383)
T ss_dssp EEGGGGTTCHHHHHHHHHHHHTS----TTCEEEEECCC--HHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC--
T ss_pred EeeecccCCHHHHHHHHHHHHHh----cCCEEEEeCCc--HHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccc
Confidence 642 45678888888877630 13334555431 1110011234567889999999999998765 1
Q ss_pred ----------HH---H----H--------h-ccCeEEEeeCCCceEEE-----EcCceEEEcCccc---cccCCCCCchH
Q 038564 193 ----------VE---E----V--------R-KLCCVVVTNGREGSEVY-----YRDGKVKVSPFLA---NQIDPTGAGDS 238 (353)
Q Consensus 193 ----------~~---~----~--------~-~~~~vvvT~G~~Ga~~~-----~~~~~~~~pa~~v---~~vDttGAGDa 238 (353)
.+ + + . +++.||||+|++|++++ .+++.+++|++++ +++|||||||+
T Consensus 260 ~~~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~~~~~~~~~~v~~~~vvDttGAGDa 339 (383)
T 2abs_A 260 EKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDA 339 (383)
T ss_dssp --------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCEEEEEECCCCCCGGGCCCCTTHHHH
T ss_pred cccccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCCeEEEecCccCCcCCcCcCCChHHH
Confidence 11 1 1 1 56899999999999998 4556788998877 78999999999
Q ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCC
Q 038564 239 FLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGL 273 (353)
Q Consensus 239 F~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~ 273 (353)
|+|||+++|++|+++++|+++|+++|+++|++.|.
T Consensus 340 F~ag~~~~l~~g~~l~~al~~A~a~aa~~v~~~Ga 374 (383)
T 2abs_A 340 FVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVGF 374 (383)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999995
No 49
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=1.7e-33 Score=261.93 Aligned_cols=254 Identities=19% Similarity=0.238 Sum_probs=196.3
Q ss_pred cEEEEccceeeeeeccCc----------ccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC----------Ccccce
Q 038564 9 GILIVGNYCHDVLIRNGT----------VLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY----------ETSYRP 68 (353)
Q Consensus 9 ~ilviG~~~iD~~~~~~~----------~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g----------~vd~~~ 68 (353)
-+.|.|++++|++...++ .....+||++.|+|+++++||.++.++|.+|+ ..| +|++++
T Consensus 2 i~tv~~n~~~D~~~~~~~~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~~gv~~~~ 80 (306)
T 2abq_A 2 IYTVTLNPSIDYIVQVENFQQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEKEEIGLSF 80 (306)
T ss_dssp EEEEESSCEEEEEEECTTCCSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHHTTCEECC
T ss_pred EEEEecCchheEEEEcCCcccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHHcCCceEE
Confidence 467999999999987652 45678999999999999999999999999998 555 388888
Q ss_pred eecCCCCCeEEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCc--c---ccccceeeecCCC----cHHHHHHHHHH
Q 038564 69 IIVPTSKTTVFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDG--K---FDYGMAVGVGGEI----LPETLEKMLEI 139 (353)
Q Consensus 69 v~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~--~---~~~~~~~~~~~~~----~~~~~~~~~~~ 139 (353)
+...+ .|+.++.+ + +++++.+...++ .+++++++.. . +...+++++++.. +.+.+.++++.
T Consensus 81 v~~~~-~t~~~~~~-~------~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 150 (306)
T 2abq_A 81 IEVEG-DTRINVKI-K------GKQETELNGTAP--LIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQI 150 (306)
T ss_dssp EEESS-CCEEEEEE-E------SSSCEEEBCCCC--CCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHH
T ss_pred EEcCC-CCceEEEE-e------CCceEEEECCCC--CCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHH
Confidence 86543 46665544 3 234555544443 3555444321 1 3456677766544 34678888888
Q ss_pred hhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC-cccEeecCHHHHccC------CHHH---H------hccCeEE
Q 038564 140 CNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP-KIGFLKASSEEALFM------DVEE---V------RKLCCVV 203 (353)
Q Consensus 140 a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~-~~dvl~~n~~Ea~~l------~~~~---~------~~~~~vv 203 (353)
++. .+...++||.. ..+.++++ ++|++++|.+|+..+ +.++ + .+++.||
T Consensus 151 a~~-----~g~~v~~D~~~----------~~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vv 215 (306)
T 2abq_A 151 AKE-----RGAFVAVDTSG----------EALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESIL 215 (306)
T ss_dssp HHT-----TTCEEEEECCH----------HHHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHh-----cCCEEEEECCh----------HHHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 875 45666788642 24567888 999999999999765 1122 1 2468999
Q ss_pred EeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcccCCCCCCHHHHHH
Q 038564 204 VTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQIGLPKFDSRVLQR 283 (353)
Q Consensus 204 vT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~G~~~~~~~~~~~ 283 (353)
||+|++|++++++++.+++|+++++++|||||||+|+|||+++|++|+++++|+++|+++|+++|++. ...+.+++++
T Consensus 216 vt~G~~G~~~~~~~~~~~~~~~~v~vvdttGAGDaF~a~~~~~l~~g~~~~~a~~~A~a~aa~~v~~~--~~p~~~ev~~ 293 (306)
T 2abq_A 216 VSFAGDGALFASAEGMFHVNVPSGEVRNSVGAGDSVVAGFLAALQEGKSLEDAVPFAVAAGSATAFSD--GFCTREEVER 293 (306)
T ss_dssp EECGGGCEEEEETTEEEEECCCCCCCCCCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHSS--SCCCHHHHHH
T ss_pred EecCCCceEEEeCCCEEEEeCCCccccCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCc--CCCCHHHHHH
Confidence 99999999999888889999999999999999999999999999999999999999999999999998 3456899999
Q ss_pred HHhHhhh
Q 038564 284 VKDEVQR 290 (353)
Q Consensus 284 ~~~~i~~ 290 (353)
+++++++
T Consensus 294 ~~~~~~~ 300 (306)
T 2abq_A 294 LQQQLQR 300 (306)
T ss_dssp HHHHHTT
T ss_pred HHhhEEE
Confidence 9988764
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=99.97 E-value=5.9e-31 Score=243.99 Aligned_cols=249 Identities=19% Similarity=0.167 Sum_probs=181.7
Q ss_pred cccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCCCeEEEEEecCCCCC---------CcccceeecCCCCCe
Q 038564 7 NHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAKVGHDFKY---------ETSYRPIIVPTSKTT 77 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG~D~~g---------~vd~~~v~~~~~~T~ 77 (353)
...|.+.|.+..|.+.+.. .....+||+++|+|++|++||.++.++|.+|+|. . +||++++.. ..+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~-~~~~~~L~~~gVd~~~v~~-~~~t~ 87 (298)
T 1vk4_A 11 HHMITFIGHVSKDVNVVDG-KREIAYGGGVVMGAITSSLLGVKTKVITKCTRED-VSKFSFLRDNGVEVVFLKS-PRTTS 87 (298)
T ss_dssp CSEEEEECCCEEEEEEETT-EEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT-GGGGTTTGGGTCEEEEEEC-SSCEE
T ss_pred ceeEEEeccccCceEeecC-eEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH-HHHHHHHHHcCCceEEEec-CCCcE
Confidence 3569999999999998765 5678999999999999999999999999999997 3 277777654 33444
Q ss_pred EEEEEecccCCCCCCccEEEeecCCCCCCCCCCCCCccccccceeeecC----CCcHHHHHHHHHHhhhhhcccccceEE
Q 038564 78 VFHAYFDSISAPSGHADRVLKRVCSCEPITPSDLPDGKFDYGMAVGVGG----EILPETLEKMLEICNVVLVDIQSVIRV 153 (353)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~v~~D~~g~~~~ 153 (353)
.. ..++. +++++++...++...+++++++. ...+++++.+ +.+.+.+..+.+....+++|+++....
T Consensus 88 ~~-~i~~~-----~g~~~~~~~~~~~~~l~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~v~~D~~~~~~~ 158 (298)
T 1vk4_A 88 IE-NRYGS-----DPDTRESFLISAADPFTESDLAF---IEGEAVHINPLWYGEFPEDLIPVLRRKVMFLSADAQGFVRV 158 (298)
T ss_dssp EE-EEC----------CCEEEEEECCCCCCGGGGGG---CCSSEEEECCSSTTSSCGGGHHHHHHHCSEEEEETHHHHEE
T ss_pred EE-EEEcC-----CCCeeEEEeccccccCCHHHcCc---CCCCEEEECCcccccccHHHHHHHHHcCCEEEEecCccccc
Confidence 33 33332 24555666666667777777643 2334444432 334444444444444577777653332
Q ss_pred -EecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccC----CHHHH------hccCeEEEeeCCCceEEEEcCceEEE
Q 038564 154 -FDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFM----DVEEV------RKLCCVVVTNGREGSEVYYRDGKVKV 222 (353)
Q Consensus 154 -~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l----~~~~~------~~~~~vvvT~G~~Ga~~~~~~~~~~~ 222 (353)
|+++.+... .+.+.++++++|++++|++|++.+ +.+++ .+++.||||+ ++|++++++ +.+++
T Consensus 159 ~~~~~~~~~~-----~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~l~~~g~~~vvvT~-~~G~~~~~~-~~~~~ 231 (298)
T 1vk4_A 159 PENEKLVYRD-----WEMKEKYLKYLDLFKVDSREAETLTGTNDLRESCRIIRSFGAKIILATH-ASGVIVFDG-NFYEA 231 (298)
T ss_dssp EETTEEEECC-----CTTHHHHGGGCSEEEEEHHHHHHHHSCSCHHHHHHHHHHTTCSSEEEEE-TTEEEEESS-SEEEE
T ss_pred cccccccccc-----hHHHHhhcccCCEEecCHHHHHHHhCCCCHHHHHHHHHhcCCCEEEEEc-CCCcEEEeC-CEEEe
Confidence 222111111 123567889999999999999876 33332 2468999999 999999987 88899
Q ss_pred cCccccccCCCCCchHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcccCCC
Q 038564 223 SPFLANQIDPTGAGDSFLGGLVTGLVQ-GLAVPDAALLGNFFGSITVAQIGLP 274 (353)
Q Consensus 223 pa~~v~~vDttGAGDaF~agfl~~l~~-g~~~~~Al~~A~a~Aa~~v~~~G~~ 274 (353)
|+++++++|||||||+|+|||+++|++ |+++++|+++|+++|+++|++.|..
T Consensus 232 ~~~~v~vvDttGAGDaF~a~~~~~l~~~g~~~~~a~~~A~a~aa~~v~~~G~~ 284 (298)
T 1vk4_A 232 SFRSWSLEGRTGRGDTCTAAFLVGFVFKKMSIEKATKFAAAVTSVKMRHPGPL 284 (298)
T ss_dssp ECCCSSGGGGTTHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHTTSSSSC
T ss_pred ccCCcccCCCcCccHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999 9999999999999999999999953
No 51
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.71 E-value=6.5e-17 Score=148.75 Aligned_cols=147 Identities=18% Similarity=0.161 Sum_probs=102.8
Q ss_pred ceeeecCCCcHHHHHHHHHHhhhhhcccccce-EEEecCCCccC---CCCCC-hhhhhh-cCCcccEeecCHHHHccC-C
Q 038564 120 MAVGVGGEILPETLEKMLEICNVVLVDIQSVI-RVFDSVDGTVN---PVPLK-ESGFYH-LLPKIGFLKASSEEALFM-D 192 (353)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~a~~v~~D~~g~~-~~~d~~~~~~~---~~~~~-~~~~~~-~l~~~dvl~~n~~Ea~~l-~ 192 (353)
+.+.+....+.+.+..+++.++. .+.. .++||+.+... ++... .+.+.+ +++++|++++|..|++.+ .
T Consensus 96 ~~v~~G~l~~~~~~~~~~~~~~~-----~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll~~~dil~pN~~Ea~~L~g 170 (288)
T 1jxh_A 96 DTTKIGMLAETDIVEAVAERLQR-----HHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLLPQVSLITPNLPEAAALLD 170 (288)
T ss_dssp SEEEECCCCSHHHHHHHHHHHHH-----TTCCSEEEECCCC------CCCHHHHHHHHHHTGGGCSEEECBHHHHHHHHT
T ss_pred CEEEECCCCCHHHHHHHHHHHHH-----CCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHHhhCcEEcCCHHHHHHHcC
Confidence 44444444467778888777764 2332 56776654211 11100 023443 789999999999999765 1
Q ss_pred H------HH---H------hccCeEEEeeCCCc-----eEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCC
Q 038564 193 V------EE---V------RKLCCVVVTNGREG-----SEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLA 252 (353)
Q Consensus 193 ~------~~---~------~~~~~vvvT~G~~G-----a~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~ 252 (353)
. ++ + .+.+.||||.|++| ++++++++.+++|+++++++||+||||+|+|+|+++|++|++
T Consensus 171 ~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~~~~~~~~~~~~~vdttGAGD~f~a~~~a~l~~g~~ 250 (288)
T 1jxh_A 171 APHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTREGEQRFSAPRVNTKNTHGTGCTLSAALAALRPRHRS 250 (288)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSSCEEEC---CCCCSCCBTHHHHHHHHHHHHGGGSSS
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECCeEEEEeccccCCCCCCCchHHHHHHHHHHHHcCCC
Confidence 1 21 1 24689999999999 888887788889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 038564 253 VPDAALLGNFFGSITVAQI 271 (353)
Q Consensus 253 ~~~Al~~A~a~Aa~~v~~~ 271 (353)
+++|+++|+++++.++++.
T Consensus 251 ~~~A~~~A~a~a~~~v~~~ 269 (288)
T 1jxh_A 251 WGETVNEAKAWLSAALAQA 269 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999765
No 52
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.70 E-value=1.1e-16 Score=144.53 Aligned_cols=138 Identities=15% Similarity=0.161 Sum_probs=101.1
Q ss_pred cHHHHHHHHHHhhhhhccccc-ceEEEecCCCccC---CCCCC-hhhh-hhcCCcccEeecCHHHHccC------CHHH-
Q 038564 129 LPETLEKMLEICNVVLVDIQS-VIRVFDSVDGTVN---PVPLK-ESGF-YHLLPKIGFLKASSEEALFM------DVEE- 195 (353)
Q Consensus 129 ~~~~~~~~~~~a~~v~~D~~g-~~~~~d~~~~~~~---~~~~~-~~~~-~~~l~~~dvl~~n~~Ea~~l------~~~~- 195 (353)
+.+.+..+++.++. .+ ...++||+.+... ++... .+.+ .++++++|++++|..|++.+ +.++
T Consensus 81 ~~~~~~~~~~~~~~-----~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~~~~ 155 (258)
T 1ub0_A 81 DAAIVEAVAEAVRR-----FGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLGRPIRTLKEA 155 (258)
T ss_dssp SHHHHHHHHHHHHH-----TTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHCSCCCSHHHH
T ss_pred CHHHHHHHHHHHHh-----CCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhCCCCCCHHHH
Confidence 45666666666654 23 3456777643221 11100 1233 35789999999999999776 1122
Q ss_pred --H------hccCeEEEeeCCC-c----eEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHH
Q 038564 196 --V------RKLCCVVVTNGRE-G----SEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNF 262 (353)
Q Consensus 196 --~------~~~~~vvvT~G~~-G----a~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a 262 (353)
+ .+++.|++|.|++ | ++++++++.+++|+++++++||+||||+|.|+|+++|++|+++++|+++|++
T Consensus 156 ~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~~~~a~~~a~~ 235 (258)
T 1ub0_A 156 EEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRGGVLRFSAPRVHTRNTHGTGCTLSAAIAALLAKGRPLAEAVAEAKA 235 (258)
T ss_dssp HHHHHHHHTTSCSCEEEEEEECC---EEEEEEETTEEEEEEECCCCCSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 1 1357899999998 9 7888877888899989999999999999999999999999999999999999
Q ss_pred HHHHHhccc
Q 038564 263 FGSITVAQI 271 (353)
Q Consensus 263 ~Aa~~v~~~ 271 (353)
+++.++++.
T Consensus 236 ~~~~~~~~~ 244 (258)
T 1ub0_A 236 YLTRALKTA 244 (258)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHHh
Confidence 999998754
No 53
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.68 E-value=2.6e-16 Score=144.25 Aligned_cols=137 Identities=22% Similarity=0.192 Sum_probs=98.2
Q ss_pred HHHHHHHHHhhhhhcccccceEEEecCCCc---cCCCCCC-hhhh-hhcCCcccEeecCHHHHccCC------HHH---H
Q 038564 131 ETLEKMLEICNVVLVDIQSVIRVFDSVDGT---VNPVPLK-ESGF-YHLLPKIGFLKASSEEALFMD------VEE---V 196 (353)
Q Consensus 131 ~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~---~~~~~~~-~~~~-~~~l~~~dvl~~n~~Ea~~l~------~~~---~ 196 (353)
+.+.++++.++.- ..+...++||+.+. ..+.... .+.+ .++++++|++++|..|++.+. .++ +
T Consensus 104 ~~~~~~l~~a~~~---~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g~~~~~~~~~~~~ 180 (283)
T 2ddm_A 104 KILAEWLTALRKD---HPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELEILTGKNCRDLDSAIAA 180 (283)
T ss_dssp HHHHHHHHHHHTT---CTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHHHHHTSCCSSHHHHHHH
T ss_pred HHHHHHHHHHHhc---CCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHHHHhCCCCCCHHHHHHH
Confidence 4556666665420 01344566765442 1222111 1222 357899999999999998761 122 1
Q ss_pred ------hccCeEEEeeCCC-------ceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 038564 197 ------RKLCCVVVTNGRE-------GSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFF 263 (353)
Q Consensus 197 ------~~~~~vvvT~G~~-------Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~ 263 (353)
.+.+.||||.|++ |++++++++.+++|+++++ +||+||||+|+|+|+++|++|+++++|+++|+++
T Consensus 181 a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~~~~~~~~~~v~-vdt~GAGDaf~a~~~~~l~~g~~~~~A~~~A~a~ 259 (283)
T 2ddm_A 181 AKSLLSDTLKWVVVTSASGNEENQEMQVVVVTADSVNVISHSRVK-TDLKGTGDLFCAQLISGLLKGKALTDAVHRAGLR 259 (283)
T ss_dssp HHHHCCSSCCEEEEEC-------CEEEEEEEETTEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEccccCccCCCceeEEEEeCCceEEEeeceeC-CCCCChHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 1367999999999 8999988888889988886 8999999999999999999999999999999999
Q ss_pred HHHHhccc
Q 038564 264 GSITVAQI 271 (353)
Q Consensus 264 Aa~~v~~~ 271 (353)
++.++++.
T Consensus 260 a~~~v~~~ 267 (283)
T 2ddm_A 260 VLEVMRYT 267 (283)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999865
No 54
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.67 E-value=3.7e-16 Score=142.26 Aligned_cols=146 Identities=18% Similarity=0.163 Sum_probs=108.3
Q ss_pred eeeecCCCcHHHHHHHHHHhhhhhcccccc-eEEEecCCCccCCCCC-Ch---hhhh-hcCCcccEeecCHHHHccC---
Q 038564 121 AVGVGGEILPETLEKMLEICNVVLVDIQSV-IRVFDSVDGTVNPVPL-KE---SGFY-HLLPKIGFLKASSEEALFM--- 191 (353)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~a~~v~~D~~g~-~~~~d~~~~~~~~~~~-~~---~~~~-~~l~~~dvl~~n~~Ea~~l--- 191 (353)
.+.+..-.+.+.+..+++.++. .+. ..++||+.+...+..+ .+ +.+. ++++++|++++|..|++.+
T Consensus 77 ~v~~G~l~~~~~~~~~~~~~~~-----~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g~ 151 (271)
T 2i5b_A 77 AMKTGMLPTVDIIELAAKTIKE-----KQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSGM 151 (271)
T ss_dssp EEEECCCCSHHHHHHHHHHHHH-----TTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHTC
T ss_pred EEEECCCCCHHHHHHHHHHHHh-----CCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhCC
Confidence 3444332345677777776664 233 3577876654333221 11 2344 6789999999999999775
Q ss_pred C-------HHHH------hccCeEEEeeCC--Cce----EEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCC
Q 038564 192 D-------VEEV------RKLCCVVVTNGR--EGS----EVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLA 252 (353)
Q Consensus 192 ~-------~~~~------~~~~~vvvT~G~--~Ga----~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~ 252 (353)
. .+++ .+.+.||+|.|+ +|+ +++++++.+++++++++++||+||||+|.|+|+++|++|++
T Consensus 152 ~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~dt~GaGD~f~a~~~~~l~~g~~ 231 (271)
T 2i5b_A 152 DELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAE 231 (271)
T ss_dssp CCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSSCEEEEEECCCCCSCCBTHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCCeEEEEeccccCCCCCCChHHHHHHHHHHHHHcCCC
Confidence 1 1111 136799999999 785 67777778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 038564 253 VPDAALLGNFFGSITVAQI 271 (353)
Q Consensus 253 ~~~Al~~A~a~Aa~~v~~~ 271 (353)
+++|+++|+++++.++++.
T Consensus 232 ~~~A~~~A~~~~~~~~~~~ 250 (271)
T 2i5b_A 232 VKEAIYAAKEFITAAIKES 250 (271)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999764
No 55
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.67 E-value=2.6e-16 Score=146.25 Aligned_cols=100 Identities=15% Similarity=0.073 Sum_probs=81.1
Q ss_pred hhhh-cCCcccEeecCHHHHccCC------HHH---H------hccCeEEEeeCCC------ceEEE-------Ec-C--
Q 038564 170 GFYH-LLPKIGFLKASSEEALFMD------VEE---V------RKLCCVVVTNGRE------GSEVY-------YR-D-- 217 (353)
Q Consensus 170 ~~~~-~l~~~dvl~~n~~Ea~~l~------~~~---~------~~~~~vvvT~G~~------Ga~~~-------~~-~-- 217 (353)
.+.+ +++++|++++|++|++.+. .++ + .+++.||||.|+. |++++ ++ +
T Consensus 135 ~l~~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~ 214 (312)
T 2yxt_A 135 VYKEKVVPLADIITPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSV 214 (312)
T ss_dssp HHHHTTGGGCSEECCCHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCC
T ss_pred HHHHHhhhhCCEEcCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEecccccccccc
Confidence 3443 8899999999999998761 122 1 2468999998886 47765 44 2
Q ss_pred --ceEEEcCccccccCCCCCchHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcc
Q 038564 218 --GKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQ-GLAVPDAALLGNFFGSITVAQ 270 (353)
Q Consensus 218 --~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~-g~~~~~Al~~A~a~Aa~~v~~ 270 (353)
+.+++|++++++ |||||||+|+|+|+++|++ |+++++|+++|+++++.++++
T Consensus 215 ~~~~~~~~~~~v~v-dttGAGDaf~a~~~~~l~~~g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 215 VMERIRMDIRKVDA-VFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp CEEEEEEEEECCSS-CCSSHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEeecccCC-CCCCchHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 567888888887 9999999999999999998 999999999999999988864
No 56
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.57 E-value=6e-15 Score=135.11 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=99.5
Q ss_pred cHHHHHHHHHHhhhhhcccccceEEEecCCCcc-CCCC-CCh---hhhhhcCCcccEeecCHHHHccC---------CHH
Q 038564 129 LPETLEKMLEICNVVLVDIQSVIRVFDSVDGTV-NPVP-LKE---SGFYHLLPKIGFLKASSEEALFM---------DVE 194 (353)
Q Consensus 129 ~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~-~~~~-~~~---~~~~~~l~~~dvl~~n~~Ea~~l---------~~~ 194 (353)
+.+.+..+.+..+.. .+...++||+.+.. .++. ..+ +.+.++++++|++++|..|++.| +.+
T Consensus 85 s~~~i~~v~~~l~~~----~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~ 160 (282)
T 3h74_A 85 SVALCQQITTYLEQQ----TLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTGAPYQVTPDLE 160 (282)
T ss_dssp SHHHHHHHHHHHHHS----CCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHTCCCCSSCCHH
T ss_pred CHHHHHHHHHHHHHC----CCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhCCCCCCHHHHH
Confidence 445554444444321 23456777765531 1122 222 23567899999999999999876 122
Q ss_pred H----H---hcc-CeEEEeeCC----CceEEEE-cCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHH
Q 038564 195 E----V---RKL-CCVVVTNGR----EGSEVYY-RDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGN 261 (353)
Q Consensus 195 ~----~---~~~-~~vvvT~G~----~Ga~~~~-~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~ 261 (353)
+ + .++ +.|+||.|. .|+++++ +++.++++++++. +||+||||+|.|+|+++|++|+++++|+++|+
T Consensus 161 ~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~~~~~~~~~~v~-~dt~GaGD~fsaai~a~l~~g~~l~~A~~~A~ 239 (282)
T 3h74_A 161 VILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAGHVQYCGARRLP-GHYNGTGDTLAAVIAGLLGRGYPLAPTLARAN 239 (282)
T ss_dssp HHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTSCEEEEEEECCS-SCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCCeEEEEEecCCC-CCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 2 1 246 789999994 7888885 5667788887775 89999999999999999999999999999999
Q ss_pred HHHHHHhcc
Q 038564 262 FFGSITVAQ 270 (353)
Q Consensus 262 a~Aa~~v~~ 270 (353)
++++.++++
T Consensus 240 ~~~~~ai~~ 248 (282)
T 3h74_A 240 QWLNMAVAE 248 (282)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988874
No 57
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.56 E-value=1.3e-14 Score=133.52 Aligned_cols=157 Identities=18% Similarity=0.196 Sum_probs=110.6
Q ss_pred cHHHHHHHHHHhhhhhcccccceEEEecCCCccC-CCC-CCh---hhhhhcCCcccEeecCHHHHccC---------CHH
Q 038564 129 LPETLEKMLEICNVVLVDIQSVIRVFDSVDGTVN-PVP-LKE---SGFYHLLPKIGFLKASSEEALFM---------DVE 194 (353)
Q Consensus 129 ~~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~-~~~-~~~---~~~~~~l~~~dvl~~n~~Ea~~l---------~~~ 194 (353)
..+.+.++++.++. .+...++||+.+... ++. ..+ +.+.++++++|++++|..|++.| +.+
T Consensus 91 ~i~~v~~~l~~~~~-----~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L~g~~~~~~~~~~ 165 (291)
T 3mbh_A 91 QIQIVSDFIKDFRQ-----PDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYLLDEPYKADSTDE 165 (291)
T ss_dssp HHHHHHHHHHHHCC-----TTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHHHTCCCCSCCCHH
T ss_pred HHHHHHHHHHHhcC-----CCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHHhCCCCCCCCCHH
Confidence 34666666666542 234456676654321 111 121 23567899999999999999875 112
Q ss_pred HH---------hccCeEEEeeCC-------CceEEEEcC--ceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHH
Q 038564 195 EV---------RKLCCVVVTNGR-------EGSEVYYRD--GKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDA 256 (353)
Q Consensus 195 ~~---------~~~~~vvvT~G~-------~Ga~~~~~~--~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~A 256 (353)
++ .+.+.|+||.|+ .|+++++++ +.+++++++++ +||+||||+|.|+|+++|++|+++++|
T Consensus 166 ~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~-~dt~GaGD~f~aai~a~l~~g~~l~~A 244 (291)
T 3mbh_A 166 ELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTCPYLP-AHYPGTGDTFTSVITGSLMQGDSLPMA 244 (291)
T ss_dssp HHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEESCCG-GGSTTHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEecccC-CCCCChHHHHHHHHHHHHHcCCCHHHH
Confidence 21 246899999653 577888763 45677777765 899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccc---CCCCCCHHHHHHHHhHhhhe
Q 038564 257 ALLGNFFGSITVAQI---GLPKFDSRVLQRVKDEVQRR 291 (353)
Q Consensus 257 l~~A~a~Aa~~v~~~---G~~~~~~~~~~~~~~~i~~~ 291 (353)
+++|+++++.++.+. |.|....-.+|+++..+..+
T Consensus 245 ~~~A~~~~~~ai~~~~~~~~~~~~gv~~e~~L~~l~~~ 282 (291)
T 3mbh_A 245 LDRATQFILQGIRATFGYEYDNREGILLEKVLHNLDMP 282 (291)
T ss_dssp HHHHHHHHHHHHHTTTTSCCCGGGCSCHHHHGGGTTSC
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccCCcHHHHHHHHHhH
Confidence 999999988887643 34444555677888777543
No 58
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.52 E-value=1.7e-14 Score=132.61 Aligned_cols=99 Identities=21% Similarity=0.186 Sum_probs=82.5
Q ss_pred hcCCcccEeecCHHHHccC------CHHHH---------hccCeEEEeeC-CCce-------EEEEcCceEEEcCccccc
Q 038564 173 HLLPKIGFLKASSEEALFM------DVEEV---------RKLCCVVVTNG-REGS-------EVYYRDGKVKVSPFLANQ 229 (353)
Q Consensus 173 ~~l~~~dvl~~n~~Ea~~l------~~~~~---------~~~~~vvvT~G-~~Ga-------~~~~~~~~~~~pa~~v~~ 229 (353)
.+++++|++++|..|++.| +.+++ .+.+.|+||.| .+|+ +++++++.+++++++++.
T Consensus 137 ~ll~~~diitpN~~E~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (289)
T 3pzs_A 137 EALPASDMIAPNLLELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTADDAWHICRPLVDF 216 (289)
T ss_dssp THHHHCSEECCCHHHHHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSSCEEEEEEECCCC
T ss_pred HhhccCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCCeEEEEEeeeecC
Confidence 3678999999999999876 12221 24689999985 5887 777777788888777776
Q ss_pred --cCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccc
Q 038564 230 --IDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQI 271 (353)
Q Consensus 230 --vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~ 271 (353)
+||+||||+|.|+|+++|++|+++++|+++|+++++.++++.
T Consensus 217 ~v~dt~GaGD~f~a~~~~~l~~g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 217 GKRQPVGVGDLTSGLLLVNLLKGEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp TTSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988887643
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.41 E-value=1.1e-12 Score=121.08 Aligned_cols=100 Identities=16% Similarity=0.126 Sum_probs=78.4
Q ss_pred hhhhhcCCcccEeecCHHHHccC------CHHHH---------hccCeEEEeeCCCc----e--EEEE-c------CceE
Q 038564 169 SGFYHLLPKIGFLKASSEEALFM------DVEEV---------RKLCCVVVTNGREG----S--EVYY-R------DGKV 220 (353)
Q Consensus 169 ~~~~~~l~~~dvl~~n~~Ea~~l------~~~~~---------~~~~~vvvT~G~~G----a--~~~~-~------~~~~ 220 (353)
+.+.++++++|+++||..|++.| +.+++ .+.+.|+||.|+.| + +++. . ++.+
T Consensus 134 ~~~~~Ll~~adiitPN~~Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~ 213 (300)
T 3zs7_A 134 DAYRELVPLADIVTPNYFEASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRF 213 (300)
T ss_dssp HHHHHHGGGCSEECCCHHHHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEE
T ss_pred HHHHHHhhhCCEecCCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEE
Confidence 34567889999999999999886 12221 25789999999988 2 3433 4 4567
Q ss_pred EEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcc
Q 038564 221 KVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQ 270 (353)
Q Consensus 221 ~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~ 270 (353)
+++.++++. |++|+||+|.|+|+++| +|+++++|+++|+++...++.+
T Consensus 214 ~~~~~~v~~-~~~GtGD~fsaal~a~l-~g~~~~~Av~~A~~~v~~~i~~ 261 (300)
T 3zs7_A 214 SGVVPYHEG-RYTGTGDVFAACLLAFS-HSHPMDVAIGKSMAVLQELIIA 261 (300)
T ss_dssp EEEEECCSS-CBTTHHHHHHHHHHHHH-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccCCC-CCcCHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 788777776 89999999999999999 9999999999999997777654
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.16 E-value=1.2e-10 Score=105.97 Aligned_cols=161 Identities=14% Similarity=0.101 Sum_probs=97.3
Q ss_pred cccceeeecCCCc----HHHHHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCC--cccEeecCHHHHcc
Q 038564 117 DYGMAVGVGGEIL----PETLEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLP--KIGFLKASSEEALF 190 (353)
Q Consensus 117 ~~~~~~~~~~~~~----~~~~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~--~~dvl~~n~~Ea~~ 190 (353)
..++.+++....+ .+.+.++++.++. .+.+..+||..... .....+...++++ ++|+++||..|+..
T Consensus 57 ~~a~~lvi~~G~~~~~~~~~~~~~~~~a~~-----~~~pvVlDp~g~~~--~~~~~~~~~~ll~~~~~~vitPN~~E~~~ 129 (272)
T 1ekq_A 57 KIAGALVLNIGTLSKESVEAMIIAGKSANE-----HGVPVILDPVGAGA--TPFRTESARDIIREVRLAAIRGNAAEIAH 129 (272)
T ss_dssp HHSSEEEEECTTCCHHHHHHHHHHHHHHHH-----TTCCEEEECTTBTT--BHHHHHHHHHHHHHSCCSEEEECHHHHHH
T ss_pred HhCCEEEEECCCCCHHHHHHHHHHHHHHHh-----cCCeEEEeCCCcCc--ccchHHHHHHHHccCCCeEECCCHHHHHH
Confidence 3455555533332 3455666665543 23344555532100 0001112235565 88999999999977
Q ss_pred C---C-H-----------HHH--------hccCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHH
Q 038564 191 M---D-V-----------EEV--------RKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGL 247 (353)
Q Consensus 191 l---~-~-----------~~~--------~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l 247 (353)
| . . ++. .+...+|++.|+.+ +++++++.+++++....+.|++|+||+|.|.+.+.+
T Consensus 130 L~g~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~G~~~-~i~~~~~~~~~~~~~~~~~~ttGaGD~lag~iaa~l 208 (272)
T 1ekq_A 130 TVGVTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAITGEVD-VIADTSHVYTLHNGHKLLTKVTGAGCLLTSVVGAFC 208 (272)
T ss_dssp HCC---------------HHHHHHHHHHHHHHTSEEEECSSSE-EEECSSCEEEECCCCGGGGGSTTHHHHHHHHHHHHH
T ss_pred HhCCCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEECCCC-EEEeCCEEEEEcCCCccccCccCchHHHHHHHHHHH
Confidence 5 1 1 111 11234555559887 566666788888877677899999999988888778
Q ss_pred HcCCCHHHHHHHHHH----HHHHHhcc---cCCCCCCHHHHHHHH
Q 038564 248 VQGLAVPDAALLGNF----FGSITVAQ---IGLPKFDSRVLQRVK 285 (353)
Q Consensus 248 ~~g~~~~~Al~~A~a----~Aa~~v~~---~G~~~~~~~~~~~~~ 285 (353)
..|.++.+|+.+|++ ++..+... .|...+..+.++++.
T Consensus 209 a~g~~~~~A~~~A~~~~~~A~~~a~~~~~~~g~g~~~~~~id~l~ 253 (272)
T 1ekq_A 209 AVEENPLFAAIAAISSYGVAAQLAAQQTADKGPGSFQIELLNKLS 253 (272)
T ss_dssp TTCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHhccCCCCCChHHHHHHHHHH
Confidence 889999999999996 55555543 454344444444443
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.06 E-value=5.8e-10 Score=111.08 Aligned_cols=96 Identities=14% Similarity=0.236 Sum_probs=74.8
Q ss_pred hcCCcccEeecCHHHHccCC--------HHH---H------hcc-CeEEEeeCCCc--------e--EEEE--cCceEEE
Q 038564 173 HLLPKIGFLKASSEEALFMD--------VEE---V------RKL-CCVVVTNGREG--------S--EVYY--RDGKVKV 222 (353)
Q Consensus 173 ~~l~~~dvl~~n~~Ea~~l~--------~~~---~------~~~-~~vvvT~G~~G--------a--~~~~--~~~~~~~ 222 (353)
++++.+|+++||..|++.|. .++ + .+. +.||||.|..+ + +++. +++.+++
T Consensus 148 ~Ll~~a~iitPN~~Ea~~L~g~~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~~~~~~ 227 (550)
T 3rm5_A 148 KVAPFADILTPNIPECYKLLGEERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQKFIIF 227 (550)
T ss_dssp HTGGGCSEECCBHHHHHHHHSCCCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTTEEEEE
T ss_pred HhhCcceEEecCHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCCeEEEE
Confidence 68899999999999997751 111 1 123 68999998863 3 4564 4556778
Q ss_pred cCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Q 038564 223 SPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITV 268 (353)
Q Consensus 223 pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v 268 (353)
+.++++.+||+|+||+|.|++++.|++|.++++|+++|++.-..++
T Consensus 228 ~~~~v~~~~t~GtGD~fsaaiaa~La~G~~l~eAv~~A~~~v~~ai 273 (550)
T 3rm5_A 228 KGNFVNTTHTHGTGCTLASAIASNLARGYSLPQSVYGGIEYVQNAV 273 (550)
T ss_dssp EEECCCCSCCBTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EecCcCCCCCcChhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999997544443
No 62
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=98.36 E-value=3.9e-06 Score=77.30 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=62.4
Q ss_pred CcccEeecCHHHHccCC------H-HHH-----hcc--CeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHH
Q 038564 176 PKIGFLKASSEEALFMD------V-EEV-----RKL--CCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLG 241 (353)
Q Consensus 176 ~~~dvl~~n~~Ea~~l~------~-~~~-----~~~--~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~a 241 (353)
+..++++||..|++.|. . ++. .+. ..+|+..| .+.++++ ++.+++.....+..+++|+||+| +
T Consensus 178 ~~~~viTPN~~E~~~L~g~~~~~~~~d~~~~aa~~l~~g~~VvlkG-~~~~i~~-~~~~~~~~~~~~~~~t~GtGD~L-a 254 (311)
T 3bgk_A 178 TKQIILTPHQKEWERLSGLTIPEQIEAATQTALAHFPKETILVAKS-HQTKIYQ-GQKIGHIQVGGPYQATGGMGDTL-A 254 (311)
T ss_dssp CSCEEEECCSCC-CTTTCCCSTTCCHHHHHHHHTTSCTTCEEEECS-SSCEEEE-TTEEEEECCCCGGGCSTTHHHHH-H
T ss_pred CCCEEECCcHHHHHHHhCCCCCcchhhHHHHHHHHHhcCCEEEEeC-CCeEEEE-CCEEEEECCCCCCCCCCcHHHHH-H
Confidence 46789999999998761 1 111 111 34555555 6677777 55455556667778999999997 6
Q ss_pred HHHHHH-Hc-CCCHHHHHHHHHHHHHHHh
Q 038564 242 GLVTGL-VQ-GLAVPDAALLGNFFGSITV 268 (353)
Q Consensus 242 gfl~~l-~~-g~~~~~Al~~A~a~Aa~~v 268 (353)
|+++++ .+ |.++.+|+.+|+++.+.+-
T Consensus 255 g~iaa~lA~~g~~~~eA~~~A~~~~~~ag 283 (311)
T 3bgk_A 255 GMIAGFVAQFHTDRFEVAAAAVFLHSYIA 283 (311)
T ss_dssp HHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHH
Confidence 666665 58 9999999999987766643
No 63
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=98.12 E-value=6e-06 Score=74.41 Aligned_cols=87 Identities=20% Similarity=-0.021 Sum_probs=62.8
Q ss_pred ccEeecCHHHHccCCH---------------HHH--------hcc-CeEEEeeCCCceEEEEcCceEEEcCccccccCCC
Q 038564 178 IGFLKASSEEALFMDV---------------EEV--------RKL-CCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPT 233 (353)
Q Consensus 178 ~dvl~~n~~Ea~~l~~---------------~~~--------~~~-~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDtt 233 (353)
.++++||..|+..|.. ++. .+. ..|++| |+.+. ++++++.+.++.......+++
T Consensus 114 ~~vITPN~~E~~~L~g~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~~~~~~~~g~~~~~~~~ 191 (265)
T 1v8a_A 114 VDVLKGNFGEISALLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGRRTFAVYNGHELLGRVT 191 (265)
T ss_dssp CSEEEEEHHHHHHHHHHHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSSCEEEECCCCGGGGGST
T ss_pred CcEEcCCHHHHHHHhCCcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCCEEEEEcCCCcCcCCcc
Confidence 8999999999877510 121 112 345555 87764 556667788887655556999
Q ss_pred CCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 038564 234 GAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSIT 267 (353)
Q Consensus 234 GAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~ 267 (353)
|+||+|.|.+.+.+.+|.+ .+|+..|...-+.+
T Consensus 192 GtGD~Lsg~iaa~lA~g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 192 GTGCMVAALTGAFVAVTEP-LKATTSALVTFGIA 224 (265)
T ss_dssp THHHHHHHHHHHHHTTSCH-HHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHH
Confidence 9999999999999999999 88888877644333
No 64
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=98.10 E-value=1.4e-05 Score=72.41 Aligned_cols=111 Identities=18% Similarity=0.204 Sum_probs=72.1
Q ss_pred CcccEeecCHHHHccC---CHHH-------H-----hccCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHH
Q 038564 176 PKIGFLKASSEEALFM---DVEE-------V-----RKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFL 240 (353)
Q Consensus 176 ~~~dvl~~n~~Ea~~l---~~~~-------~-----~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~ 240 (353)
...++++||..|++.| +..+ + .+...+|+-.|. +.+++++++.+.+.....+...|+|+||++.
T Consensus 144 ~~~~vlTPN~~E~~~L~g~~~~~~~~d~~~aa~~la~~~~~~VvlKG~-~~vi~~~~g~~~~~~~g~~~~at~GtGD~La 222 (279)
T 3rpz_A 144 EGPVILTPHPGEFFRMTGVPVNELQKKRAEYAKEWAAQLQTVIVLKGN-QTVIAFPDGDCWLNPTGNGALAKGGTGDTLT 222 (279)
T ss_dssp SSCEEECCCHHHHHHHHCCCHHHHTTSHHHHHHHHHHHHTSEEEECST-TCEEECTTSCEEECCCCCGGGCSTTHHHHHH
T ss_pred cCCEEEecCHHHHHHHhCCCccchHHHHHHHHHHHHHHcCeEEEEeCC-CcEEECCCceEEEeCCCCCCCCCCChHHHHH
Confidence 3457999999998776 2211 1 123445555564 4667776666666655566778999999875
Q ss_pred HHHHHHHHcCCCHHHHHHHHHH----HHHHHhcccCCCCCCHHHHHHHHhH
Q 038564 241 GGLVTGLVQGLAVPDAALLGNF----FGSITVAQIGLPKFDSRVLQRVKDE 287 (353)
Q Consensus 241 agfl~~l~~g~~~~~Al~~A~a----~Aa~~v~~~G~~~~~~~~~~~~~~~ 287 (353)
|.+.+.+.+|.++.+|+..|.. ++-...++.|...+...++-+.+.+
T Consensus 223 g~iaa~lA~g~~~~~A~~~a~~lh~~Ag~~a~~~~g~~~~~a~dl~~~lp~ 273 (279)
T 3rpz_A 223 GMILGMLCCHEDPKHAVLNAVYLHGACAELWTDEHSAHTLLAHELSDILPR 273 (279)
T ss_dssp HHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHSCTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHH
Confidence 5555556689999999999875 4455555667555555555554443
No 65
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=98.04 E-value=1.8e-05 Score=72.81 Aligned_cols=90 Identities=14% Similarity=0.200 Sum_probs=62.4
Q ss_pred CcccEeecCHHHHccC---CH--------HH-HhccCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHH
Q 038564 176 PKIGFLKASSEEALFM---DV--------EE-VRKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGL 243 (353)
Q Consensus 176 ~~~dvl~~n~~Ea~~l---~~--------~~-~~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agf 243 (353)
+..++++||..|++.| +. .+ +.+...+|+..| .+.++++ ++...+.+...+..+|+|+||++ +|+
T Consensus 164 ~~~~viTPN~~E~~~L~g~~~~~~~~~~a~~aA~~lg~~VvlKG-~~~vi~~-~~~~~~~~~g~~~~~t~GtGD~L-ag~ 240 (310)
T 2r3b_A 164 PEKVVFTPHQMEWQRLSHLPIEQQTLANNQRQQAKLGSTIVLKS-HRTTIFH-AGEPFQNTGGNPGMATGGTGDTL-AGI 240 (310)
T ss_dssp GGGEEEECCHHHHHHHHCCCGGGCCHHHHHHHHHHHTSEEEECS-TTCEEEC-SSSCEECCCCCGGGCSTTHHHHH-HHH
T ss_pred CCCEEEcCCHHHHHHHhCCCCCcccchHHHHHHHHhCcEEEEeC-CceEEEE-CCEEEEECCCCCCCCCCChHHHH-HHH
Confidence 4678999999999876 11 11 122344566666 5677776 44344555566778999999997 666
Q ss_pred HHHH-HcCCCHHHHHHHHHHHHHHHh
Q 038564 244 VTGL-VQGLAVPDAALLGNFFGSITV 268 (353)
Q Consensus 244 l~~l-~~g~~~~~Al~~A~a~Aa~~v 268 (353)
++++ .+|.++.+|+.+|+.+.+.+-
T Consensus 241 Iaa~lA~g~~~~eA~~~A~~~~~~ag 266 (310)
T 2r3b_A 241 IAGFLAQFKPTIETIAGAVYLHSLIG 266 (310)
T ss_dssp HHHHHHHSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 6665 589999999999987666633
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=97.86 E-value=8.6e-05 Score=72.69 Aligned_cols=111 Identities=17% Similarity=0.197 Sum_probs=72.6
Q ss_pred CCcccEeecCHHHHccC---CHH------H-H----hccCeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHH
Q 038564 175 LPKIGFLKASSEEALFM---DVE------E-V----RKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFL 240 (353)
Q Consensus 175 l~~~dvl~~n~~Ea~~l---~~~------~-~----~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~ 240 (353)
.+..++++||..|+..| +.. + + .+...+|+..|. +.++++++..+ +.....+..+|+|+||+|.
T Consensus 369 ~~~~~vlTPN~~E~~~L~g~~~~~~~~d~~aa~~la~~~~~~VvlKG~-~~vi~~~~~~~-~~~~g~~~~at~GsGD~La 446 (502)
T 3rss_A 369 RKSPAVLTPHPGEMARLVKKTVGDVKYNYELAEEFAKENDCVLVLKSA-TTIVTDGEKTL-FNITGNTGLSKGGSGDVLT 446 (502)
T ss_dssp CSSCEEECCCHHHHHHHHTCCHHHHTTCHHHHHHHHHHHTSEEEECSS-SEEEECSSCEE-EECCCCGGGSSTTHHHHHH
T ss_pred cCCCEEEeCCHHHHHHHhCCCccchHHHHHHHHHHHHHcCCEEEEeCC-CeEEEcCCEEE-EECCCCCccccCCchHHHH
Confidence 34578999999998776 111 1 1 123456676675 45666666444 3334556779999999888
Q ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccc--CCCCCCHHHHHHHHhH
Q 038564 241 GGLVTGLVQGLAVPDAALLGNFFGSITVAQI--GLPKFDSRVLQRVKDE 287 (353)
Q Consensus 241 agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~--G~~~~~~~~~~~~~~~ 287 (353)
|.+.+.+.+|.++.+|+.+|+..-+.+-... |...+...++-+.+.+
T Consensus 447 g~iaa~lA~g~~~~~Aa~~A~~~hg~Ag~~aa~g~~~~~a~dl~~~lp~ 495 (502)
T 3rss_A 447 GMIAGFIAQGLSPLEASTVSVYLHGFAAELFEQDERGLTASELLRLIPE 495 (502)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCSSCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHH
Confidence 7777777899999999999987766653221 5444444545444443
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=97.12 E-value=0.0025 Score=57.28 Aligned_cols=87 Identities=18% Similarity=0.083 Sum_probs=60.3
Q ss_pred cccEeecCHHHHccCC----------H-------H---HH--------hccC-eEEEeeCCCceEEEEcCceEEEcCccc
Q 038564 177 KIGFLKASSEEALFMD----------V-------E---EV--------RKLC-CVVVTNGREGSEVYYRDGKVKVSPFLA 227 (353)
Q Consensus 177 ~~dvl~~n~~Ea~~l~----------~-------~---~~--------~~~~-~vvvT~G~~Ga~~~~~~~~~~~pa~~v 227 (353)
..+++.+|..|+..|. . + +. .+.. .+|+=.|+. -+++++++.+.++.-..
T Consensus 115 ~~~VItpN~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~-D~i~dg~~~~~~~~G~~ 193 (273)
T 3dzv_A 115 QPTVVKGNLSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ-DVLVSQEQVIVLQNGVP 193 (273)
T ss_dssp CCSEEEEEHHHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS-EEEECSSCEEEECCCCG
T ss_pred CCcEECCCHHHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe-eEEEcCCEEEEeCCCCc
Confidence 6799999999987651 0 1 11 1123 444444433 25556666777776554
Q ss_pred cccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 038564 228 NQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFG 264 (353)
Q Consensus 228 ~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~A 264 (353)
..-.++|.||++.|.+.+.+.+|.++.+|+..|...=
T Consensus 194 ~~~~v~GtGc~Ls~~Iaa~lA~g~~~~~Aa~~A~~~~ 230 (273)
T 3dzv_A 194 ELDCFTGTGDLVGALVAALLGEGNAPMTAAVAAVSYF 230 (273)
T ss_dssp GGGSSTTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred ccCCcCCchHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 4556899999999999999999999999988887643
No 68
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=95.45 E-value=0.18 Score=48.74 Aligned_cols=137 Identities=16% Similarity=0.166 Sum_probs=80.0
Q ss_pred HHHHHHHhhhhhcccccceEEEecCCCccCCCCCChhhhhhcCCcccEeecCHHHHccCCHH--------H---------
Q 038564 133 LEKMLEICNVVLVDIQSVIRVFDSVDGTVNPVPLKESGFYHLLPKIGFLKASSEEALFMDVE--------E--------- 195 (353)
Q Consensus 133 ~~~~~~~a~~v~~D~~g~~~~~d~~~~~~~~~~~~~~~~~~~l~~~dvl~~n~~Ea~~l~~~--------~--------- 195 (353)
+.++++.. ++++|..++. . ..+.+.++...++.||..|+..|... +
T Consensus 309 l~~~l~~~-p~VlDADaL~---~-------------~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~~~d~~~aa 371 (475)
T 3k5w_A 309 FNRWLELA-PCVLDAGVFY---H-------------KEILQALEKEAVLTPHPKEFLSLLNLVGINISMLELLDNKLEIA 371 (475)
T ss_dssp HHHHHHHS-CEEEEGGGGG---S-------------GGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSGGGSCC--C
T ss_pred HHHHHhcC-CEEEECcccC---C-------------chhhhccCCCEEECCCHHHHHHHhCCccCCCCcchhHHHHHHHH
Confidence 55555544 6777765541 0 11223445557999999998765211 0
Q ss_pred --H-hcc-CeEEEeeCCCceEEEEcCceEEEcCccccccCCCCCchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccc
Q 038564 196 --V-RKL-CCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPTGAGDSFLGGLVTGLVQGLAVPDAALLGNFFGSITVAQI 271 (353)
Q Consensus 196 --~-~~~-~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDttGAGDaF~agfl~~l~~g~~~~~Al~~A~a~Aa~~v~~~ 271 (353)
+ .+. ..+|+-.|.. .++++++..+..+ ...+...|.|.||++.|.+.+-+.+|.++.+|+..|...-+.+-...
T Consensus 372 ~~la~~~g~~~VvlKG~~-~vI~~~~~~~~~~-~g~~~mat~GtGdvLsg~Iaa~lA~g~~~~~Aa~~a~~lhg~ag~~a 449 (475)
T 3k5w_A 372 RDFSQKYPKVVLLLKGAN-TLIAHQGQVFINI-LGSVALAKAGSGDVLAGLILSLLSQNYTPLDAAINASLAHALASLEF 449 (475)
T ss_dssp HHHHHHCTTEEEEECSSS-EEEEETTEEEEEC-CCCGGGCSTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHGGGGC
T ss_pred HHHHHHcCCeEEEEeCCC-CEEECCCEEEEEC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHh
Confidence 1 123 4455555544 3445544444333 33344568999999999998889999999999888766555443332
Q ss_pred -CCCCCCHHHHHHHHhHh
Q 038564 272 -GLPKFDSRVLQRVKDEV 288 (353)
Q Consensus 272 -G~~~~~~~~~~~~~~~i 288 (353)
+-..+...++-+.+.+.
T Consensus 450 ~~~~~~~a~dl~~~l~~~ 467 (475)
T 3k5w_A 450 KNNYALTPLDLIEKIKQL 467 (475)
T ss_dssp SSTTCCCHHHHHHHHHTC
T ss_pred ccCCCcCHHHHHHHhhhh
Confidence 22334455555555443
No 69
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=94.23 E-value=0.18 Score=44.75 Aligned_cols=84 Identities=18% Similarity=0.003 Sum_probs=50.9
Q ss_pred cccEeecCHHHHccCC---------------HHH--------HhccCeEEEeeCCCceEEEEcCceEEEcCccccccCCC
Q 038564 177 KIGFLKASSEEALFMD---------------VEE--------VRKLCCVVVTNGREGSEVYYRDGKVKVSPFLANQIDPT 233 (353)
Q Consensus 177 ~~dvl~~n~~Ea~~l~---------------~~~--------~~~~~~vvvT~G~~Ga~~~~~~~~~~~pa~~v~~vDtt 233 (353)
+.+++++|..|...|. .++ +.+...+|+-.|+. -++.++++.+.++.-..-.-..+
T Consensus 113 ~~~vIrgN~sEi~~L~g~~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlkG~~-d~I~dg~~~~~~~~G~~~m~~vt 191 (265)
T 3hpd_A 113 GVDVLKGNFGEISALLGEEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVTGAV-DYVSDGRRTFAVYNGHELLGRVT 191 (265)
T ss_dssp CCSEEEEEHHHHHHHHHHHC----------CHHHHHHHHHHHHHHTTSEEEEESSS-EEEECSSCEEEECCCCGGGGGST
T ss_pred CCcEEcCCHHHHHHHhcccCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEeCCC-eEEEcCCEEEEECCCChHhhcCC
Confidence 6789999999988761 111 12345566666654 45666666666654433333458
Q ss_pred CCchHHHHHHHHHHHcCCCHHHHHHHHHH
Q 038564 234 GAGDSFLGGLVTGLVQGLAVPDAALLGNF 262 (353)
Q Consensus 234 GAGDaF~agfl~~l~~g~~~~~Al~~A~a 262 (353)
|.||++.|. +++++...+..+|...|..
T Consensus 192 GtGc~Lsg~-iaa~lA~~~~~~Aa~~a~~ 219 (265)
T 3hpd_A 192 GTGCMVAAL-TGAFVAVTEPLKATTSALV 219 (265)
T ss_dssp THHHHHHHH-HHHHHTTSCHHHHHHHHHH
T ss_pred ccchHHHHH-HHHHHhcCChHHHHHHHHH
Confidence 999987555 5555443366666666554
No 70
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=93.05 E-value=0.83 Score=44.86 Aligned_cols=92 Identities=21% Similarity=0.062 Sum_probs=58.3
Q ss_pred hhhcCC--cccEeecCHHHHccCC---H--------------HHH--------hccCeEEEeeCCCceEEEEc-------
Q 038564 171 FYHLLP--KIGFLKASSEEALFMD---V--------------EEV--------RKLCCVVVTNGREGSEVYYR------- 216 (353)
Q Consensus 171 ~~~~l~--~~dvl~~n~~Ea~~l~---~--------------~~~--------~~~~~vvvT~G~~Ga~~~~~------- 216 (353)
..++++ ..+++.+|..|+..|. . ++. .+...+|+-.|+. -+++++
T Consensus 354 ~~~Ll~~~~~~vItpN~~E~~~L~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlkG~~-D~I~dg~~~~~~~ 432 (540)
T 3nl6_A 354 NNKLLTFGQFSCIKGNSSEILGLAELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCTGEF-DFIADGTIEGKYS 432 (540)
T ss_dssp HHHHTTSCCCSEEEECHHHHHHHTTC--------------CCHHHHHHHHHHHHHTTSEEEECSSS-EEEEECCGGGBCC
T ss_pred HHHHHhhCCCeEECCCHHHHHHHhCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEcCCC-eEEECCCcccccc
Confidence 345665 6899999999987651 1 111 1234555555644 344555
Q ss_pred ------------CceEEEcCcc-ccccCCCCCchHHHHHHHHHHHcCC---CHHHHHHHHHHH
Q 038564 217 ------------DGKVKVSPFL-ANQIDPTGAGDSFLGGLVTGLVQGL---AVPDAALLGNFF 263 (353)
Q Consensus 217 ------------~~~~~~pa~~-v~~vDttGAGDaF~agfl~~l~~g~---~~~~Al~~A~a~ 263 (353)
+..+.++.-. .-.-.++|.||++.+...+-+..+. ++.+|+..|...
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~G~~~~m~~vtGtGc~Lsg~Iaa~la~~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 433 LSKGTNGTSVEDIPCVAVEAGPIEIMGDITASGCSLGSTIACMIGGQPSEGNLFHAVVAGVML 495 (540)
T ss_dssp SSSCCSSCCTTSSCEEEEECSCCGGGGSSTTHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHH
T ss_pred ccccccccccCCccEEEECCCChhhccCccCchHHHHHHHHHHHhcCcCCCCHHHHHHHHHHH
Confidence 3455555444 2233579999999988877788887 588887776653
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=85.67 E-value=0.97 Score=43.30 Aligned_cols=29 Identities=21% Similarity=0.419 Sum_probs=26.9
Q ss_pred ccCChHHHHHHHHHhCCCCeEE--EEEecCC
Q 038564 31 TLGGAASFISNVLNGLSISCSL--IAKVGHD 59 (353)
Q Consensus 31 ~~GG~a~N~A~~la~LG~~v~~--ig~vG~D 59 (353)
+.||.+...|..++++|.++.+ ++.+|..
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~~ 139 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSRL 139 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCHH
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCHH
Confidence 8999999999999999999988 8888875
No 72
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=62.84 E-value=1.4 Score=42.28 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=25.8
Q ss_pred ccCChHHHHHHHHHhCCCCeEE--EEEecCC
Q 038564 31 TLGGAASFISNVLNGLSISCSL--IAKVGHD 59 (353)
Q Consensus 31 ~~GG~a~N~A~~la~LG~~v~~--ig~vG~D 59 (353)
+.||.+.-+|..|+.+|.++.+ ++.+|..
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~~ 147 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPKL 147 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCHH
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCHH
Confidence 9999999999999999999988 6677664
No 73
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=60.23 E-value=6 Score=37.81 Aligned_cols=29 Identities=17% Similarity=0.382 Sum_probs=25.5
Q ss_pred ccCChHHHHHHHHHhCCCCeEE--EEEecCC
Q 038564 31 TLGGAASFISNVLNGLSISCSL--IAKVGHD 59 (353)
Q Consensus 31 ~~GG~a~N~A~~la~LG~~v~~--ig~vG~D 59 (353)
+.||.+.-.|..|+.+|.++.+ ++.+|..
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~~ 142 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSEL 142 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCHH
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCHH
Confidence 8999999999999999999987 6666664
No 74
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=59.09 E-value=5.7 Score=38.09 Aligned_cols=30 Identities=37% Similarity=0.470 Sum_probs=24.9
Q ss_pred ccccCChHHHHHHHHHhCCCC-eEEEEEecC
Q 038564 29 AETLGGAASFISNVLNGLSIS-CSLIAKVGH 58 (353)
Q Consensus 29 ~~~~GG~a~N~A~~la~LG~~-v~~ig~vG~ 58 (353)
..+.||.+.-+|..|+++|.+ |.+.+..+.
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~s 143 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLP 143 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCC
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCC
Confidence 458999999999999999994 776766554
No 75
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=55.77 E-value=8.5 Score=36.73 Aligned_cols=31 Identities=10% Similarity=0.185 Sum_probs=22.8
Q ss_pred eEEEcCccc-cccCCCCCchHH-HHHHHHHHHc
Q 038564 219 KVKVSPFLA-NQIDPTGAGDSF-LGGLVTGLVQ 249 (353)
Q Consensus 219 ~~~~pa~~v-~~vDttGAGDaF-~agfl~~l~~ 249 (353)
..-+|..-+ +++-|+|.||+| .+||++.+..
T Consensus 421 i~~~P~lv~~~P~~TVGlGDtiSa~gf~~~l~~ 453 (455)
T 1ua4_A 421 IAFIPTKIVAKPKSTVGIGDTISSSAFIGEFSF 453 (455)
T ss_dssp EEEEECBCCSSCSCCTTHHHHHHHHHHHHHHHT
T ss_pred EEEEehhhcCCCCceecCCcchhhHHHHHHHHh
Confidence 334455443 478999999999 7799998864
No 76
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=55.33 E-value=7.2 Score=37.35 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=17.9
Q ss_pred cccCCCCCchHH-HHHHHHHHH
Q 038564 228 NQIDPTGAGDSF-LGGLVTGLV 248 (353)
Q Consensus 228 ~~vDttGAGDaF-~agfl~~l~ 248 (353)
+++-|+|.||+| .+||++.+.
T Consensus 442 ~P~~TVGLGDtISa~gfv~~l~ 463 (467)
T 1gc5_A 442 SPKSTVGIGDTISSSAFVSEFG 463 (467)
T ss_dssp SCSCCSSHHHHHHHHHHHHHHH
T ss_pred CCCceecCCcchhhHHHHHHHH
Confidence 468899999999 679998875
No 77
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=43.19 E-value=24 Score=31.00 Aligned_cols=20 Identities=10% Similarity=0.051 Sum_probs=16.9
Q ss_pred hHHHHHHHHHhCCCCeEEEE
Q 038564 35 AASFISNVLNGLSISCSLIA 54 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~ig 54 (353)
+|..+|..|+++|.+|.++-
T Consensus 17 AGl~aA~~l~~~g~~V~liE 36 (312)
T 4gcm_A 17 AGMTAAVYASRANLKTVMIE 36 (312)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEe
Confidence 45678899999999999984
No 78
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=34.34 E-value=38 Score=29.05 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=35.8
Q ss_pred cccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCCCeEEEEEec
Q 038564 7 NHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAKVG 57 (353)
Q Consensus 7 ~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~~v~~ig~vG 57 (353)
.++|+|-|..+..-+=.+.--...+-|+-|.-+|.++++.|.+|.+++.-.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 357888888754333221112246778899999999999999999998543
No 79
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=33.60 E-value=42 Score=29.53 Aligned_cols=21 Identities=19% Similarity=0.145 Sum_probs=17.9
Q ss_pred hHHHHHHHHHhCCCCeEEEEE
Q 038564 35 AASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~ig~ 55 (353)
+|.-+|..|++.|.+|.++=+
T Consensus 13 ~Gl~~A~~L~~~G~~V~vlE~ 33 (336)
T 1yvv_A 13 AGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp HHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHCCCcEEEEEC
Confidence 678889999999999988843
No 80
>1ztd_A Hypothetical protein PFU-631545-001; structural genomics, southeast collaboratory for structural genomics, secsg; 2.00A {Pyrococcus furiosus} SCOP: a.149.1.2
Probab=33.09 E-value=35 Score=25.50 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=28.1
Q ss_pred ccCCCCCchHHHHHHHHHHHcC-CCHHHHHHHHH
Q 038564 229 QIDPTGAGDSFLGGLVTGLVQG-LAVPDAALLGN 261 (353)
Q Consensus 229 ~vDttGAGDaF~agfl~~l~~g-~~~~~Al~~A~ 261 (353)
-.|-.|-||..-|-+.|+|+.| .+.++|+..=.
T Consensus 63 R~DKh~kGd~aEA~iAyAWleG~is~eEaveilk 96 (133)
T 1ztd_A 63 RVDKHAKGDYAEALIAKAWLMGLISEREAVEIIK 96 (133)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred cccccCccHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 4588999999999999999998 58888887643
No 81
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=32.83 E-value=20 Score=31.45 Aligned_cols=22 Identities=14% Similarity=-0.011 Sum_probs=18.5
Q ss_pred ChHHHHHHHHHhCCCCeEEEEE
Q 038564 34 GAASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 34 G~a~N~A~~la~LG~~v~~ig~ 55 (353)
-+|..+|..|++.|.++.++-+
T Consensus 17 ~aGl~aA~~l~~~g~~v~lie~ 38 (332)
T 3lzw_A 17 PVGLFTAFYGGMRQASVKIIES 38 (332)
T ss_dssp HHHHHHHHHHHHTTCCEEEECS
T ss_pred HHHHHHHHHHHHCCCCEEEEEc
Confidence 3677888999999999999865
No 82
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=31.56 E-value=50 Score=28.17 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=35.6
Q ss_pred CCcccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCCCeEEEE
Q 038564 5 HSNHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIA 54 (353)
Q Consensus 5 ~~~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~~v~~ig 54 (353)
+..++++|.|..+..-+=.+.--...+.||-|.-+|..+++.|.+|.+++
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEE
Confidence 44567888888754333211112246778999999999999999999975
No 83
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=30.55 E-value=46 Score=29.03 Aligned_cols=23 Identities=26% Similarity=0.179 Sum_probs=17.8
Q ss_pred CC-hHHHHHHHHHhCCCCeEEEEE
Q 038564 33 GG-AASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 33 GG-~a~N~A~~la~LG~~v~~ig~ 55 (353)
|| +|..+|..|+|+|.+|.++-+
T Consensus 14 aGpAGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 14 AGPAGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeC
Confidence 35 455677899999999998863
No 84
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=29.36 E-value=40 Score=32.23 Aligned_cols=21 Identities=10% Similarity=0.115 Sum_probs=17.5
Q ss_pred hHHHHHHHHHhCCCCeEEEEE
Q 038564 35 AASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~ig~ 55 (353)
+|.-+|..|++.|.+|.++-+
T Consensus 18 aGl~aA~~La~~G~~V~liE~ 38 (512)
T 3e1t_A 18 GGSTLASFVAMRGHRVLLLER 38 (512)
T ss_dssp HHHHHHHHHHTTTCCEEEECS
T ss_pred HHHHHHHHHHhCCCCEEEEcc
Confidence 677788999999999988853
No 85
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=28.74 E-value=34 Score=31.86 Aligned_cols=21 Identities=10% Similarity=0.164 Sum_probs=18.3
Q ss_pred hHHHHHHHHHhCCCCeEEEEE
Q 038564 35 AASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~ig~ 55 (353)
+|.-.|..|++.|.+|.++-+
T Consensus 33 aGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 33 AGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCeEEEEcC
Confidence 677889999999999999965
No 86
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=27.97 E-value=57 Score=27.85 Aligned_cols=21 Identities=14% Similarity=-0.032 Sum_probs=18.6
Q ss_pred hHHHHHHHHHhCCCCeEEEEE
Q 038564 35 AASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~ig~ 55 (353)
+|..+|..|++.|.++.++-+
T Consensus 13 aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 13 AGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEEeC
Confidence 677889999999999999975
No 87
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=26.38 E-value=57 Score=30.78 Aligned_cols=23 Identities=26% Similarity=0.167 Sum_probs=19.9
Q ss_pred CChHHHHHHHHHhCCCCeEEEEE
Q 038564 33 GGAASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 33 GG~a~N~A~~la~LG~~v~~ig~ 55 (353)
|-+|+.+|..+++.|.+|.++..
T Consensus 10 G~AG~~AA~~la~~G~~V~liE~ 32 (443)
T 3g5s_A 10 GLAGSEAAWTLLRLGVPVRLFEM 32 (443)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECC
T ss_pred hHHHHHHHHHHHHCCCcEEEEec
Confidence 44788999999999999999964
No 88
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=24.95 E-value=61 Score=28.03 Aligned_cols=23 Identities=17% Similarity=0.030 Sum_probs=19.7
Q ss_pred CChHHHHHHHHHhCCCCeEEEEE
Q 038564 33 GGAASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 33 GG~a~N~A~~la~LG~~v~~ig~ 55 (353)
|-+|..+|..|++.|.+|.++-+
T Consensus 24 G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 24 GPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEES
T ss_pred cHHHHHHHHHHHHCCCcEEEEec
Confidence 44778899999999999999875
No 89
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=24.51 E-value=58 Score=29.35 Aligned_cols=19 Identities=11% Similarity=0.228 Sum_probs=15.7
Q ss_pred hHHHHHHHHHhCCCCeEEE
Q 038564 35 AASFISNVLNGLSISCSLI 53 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~i 53 (353)
+|.-.|..|++.|++|.++
T Consensus 12 aGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 12 GGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEE
Confidence 6677888889999888777
No 90
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=23.29 E-value=52 Score=32.23 Aligned_cols=25 Identities=28% Similarity=0.452 Sum_probs=21.5
Q ss_pred cCChHHHHHHHHHhCCCCeEEEEEe
Q 038564 32 LGGAASFISNVLNGLSISCSLIAKV 56 (353)
Q Consensus 32 ~GG~a~N~A~~la~LG~~v~~ig~v 56 (353)
.|.+|+.+|+.|++.|.+|.++.+-
T Consensus 15 aG~AGl~AA~~la~~G~~V~vlEK~ 39 (588)
T 2wdq_A 15 AGGAGMRAALQISQSGQTCALLSKV 39 (588)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCHHHHHHHHHHHHCCCcEEEEecC
Confidence 4668899999999999999999864
No 91
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=23.08 E-value=72 Score=29.03 Aligned_cols=21 Identities=14% Similarity=0.226 Sum_probs=17.0
Q ss_pred hHHHHHHHHHhCCCCeEEEEE
Q 038564 35 AASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 35 ~a~N~A~~la~LG~~v~~ig~ 55 (353)
+|.-.|..|++.|.+|.++=+
T Consensus 37 aGl~~A~~L~~~G~~v~v~E~ 57 (398)
T 2xdo_A 37 VGLTMAKLLQQNGIDVSVYER 57 (398)
T ss_dssp HHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEeC
Confidence 677788888888988888854
No 92
>3cra_A Protein MAZG; tandem-repeat domain, hydrolase; 2.10A {Escherichia coli} PDB: 3crc_A*
Probab=22.99 E-value=1e+02 Score=26.95 Aligned_cols=57 Identities=21% Similarity=0.207 Sum_probs=38.0
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHH-----HHH--HhcccC--CCCCCHHHHHHHHhHhhhe
Q 038564 235 AGDSFLGGLVTGLVQGLAVPDAALLGNFF-----GSI--TVAQIG--LPKFDSRVLQRVKDEVQRR 291 (353)
Q Consensus 235 AGDaF~agfl~~l~~g~~~~~Al~~A~a~-----Aa~--~v~~~G--~~~~~~~~~~~~~~~i~~~ 291 (353)
-||.+.+....+...|.++++|++.++.- ..+ .+...| +...+.++++.+.++.+..
T Consensus 196 lGDlLFalVnlAR~~gIDpE~ALr~an~KF~~Rf~~~E~~~~~~g~~l~~~sl~e~d~lW~~aK~~ 261 (265)
T 3cra_A 196 MGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQ 261 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC----CCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHh
Confidence 58999999999999999999999988762 111 112234 4566677788888877543
No 93
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.82 E-value=98 Score=26.95 Aligned_cols=39 Identities=21% Similarity=0.201 Sum_probs=26.0
Q ss_pred CCCCCCcccEEEEccceeeeeeccCcccccccCChHHHHHHHHHhCCCCeEEEEE
Q 038564 1 MVRNHSNHGILIVGNYCHDVLIRNGTVLAETLGGAASFISNVLNGLSISCSLIAK 55 (353)
Q Consensus 1 m~~~~~~~~ilviG~~~iD~~~~~~~~~~~~~GG~a~N~A~~la~LG~~v~~ig~ 55 (353)
|....|+++|+|+|. .|+-|..++..|.+.|.+|..+++
T Consensus 5 m~~~~m~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~l~R 43 (318)
T 2r6j_A 5 MEENGMKSKILIFGG----------------TGYIGNHMVKGSLKLGHPTYVFTR 43 (318)
T ss_dssp ----CCCCCEEEETT----------------TSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred ccccCCCCeEEEECC----------------CchHHHHHHHHHHHCCCcEEEEEC
Confidence 444445556777664 367788899999999998877654
Done!