Your job contains 1 sequence.
>038568
MSHLHSVSSEAFKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLNEINVFDLISDYS
HVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIR
SVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNK
AHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL
ALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRT
VRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038568
(357 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024031 - symbol:AT1G24530 "AT1G24530" species... 783 7.9e-78 1
TAIR|locus:2032452 - symbol:AT1G24130 "AT1G24130" species... 656 2.3e-64 1
TAIR|locus:2170061 - symbol:AT5G50120 "AT5G50120" species... 644 4.2e-63 1
TAIR|locus:2066276 - symbol:AT2G26490 "AT2G26490" species... 533 2.4e-51 1
TAIR|locus:2010157 - symbol:AT1G49450 "AT1G49450" species... 502 4.7e-48 1
TAIR|locus:2015423 - symbol:AT1G47610 "AT1G47610" species... 487 1.8e-46 1
TAIR|locus:2083710 - symbol:AT3G51930 "AT3G51930" species... 487 1.8e-46 1
TAIR|locus:2116194 - symbol:AT4G34380 "AT4G34380" species... 485 3.0e-46 1
TAIR|locus:2074825 - symbol:AT3G50390 "AT3G50390" species... 482 6.2e-46 1
TAIR|locus:2085929 - symbol:AT3G18950 "AT3G18950" species... 473 5.6e-45 1
UNIPROTKB|F1NEH1 - symbol:TRAF7 "Uncharacterized protein"... 196 7.9e-13 1
ZFIN|ZDB-GENE-070112-2212 - symbol:traf7 "TNF receptor-as... 191 2.9e-12 1
MGI|MGI:3042141 - symbol:Traf7 "TNF receptor-associated f... 188 5.7e-12 1
RGD|1559653 - symbol:Traf7 "TNF receptor-associated facto... 188 6.2e-12 1
UNIPROTKB|E2QXW8 - symbol:TRAF7 "Uncharacterized protein"... 188 6.9e-12 1
UNIPROTKB|Q6Q0C0 - symbol:TRAF7 "E3 ubiquitin-protein lig... 188 6.9e-12 1
UNIPROTKB|Q5EA56 - symbol:TRAF7 "Uncharacterized protein"... 186 1.2e-11 1
UNIPROTKB|I3LMJ3 - symbol:LOC100738291 "Uncharacterized p... 184 1.3e-11 1
UNIPROTKB|F1P0J6 - symbol:TRAF7 "Uncharacterized protein"... 185 1.5e-11 1
UNIPROTKB|F1RFA9 - symbol:TRAF7 "Uncharacterized protein"... 184 2.0e-11 1
ZFIN|ZDB-GENE-061110-55 - symbol:zgc:153492 "zgc:153492" ... 155 2.0e-09 2
WB|WBGene00003009 - symbol:lin-23 species:6239 "Caenorhab... 162 6.6e-09 1
UNIPROTKB|Q09990 - symbol:lin-23 "F-box/WD repeat-contain... 162 6.6e-09 1
ZFIN|ZDB-GENE-030131-6622 - symbol:wdr48 "WD repeat domai... 161 8.7e-09 1
UNIPROTKB|Q05B17 - symbol:wdr48 "WD repeat-containing pro... 160 1.1e-08 1
UNIPROTKB|Q4R2Z6 - symbol:WDR48 "WD repeat-containing pro... 159 1.3e-08 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 156 1.4e-08 1
UNIPROTKB|F1MV75 - symbol:WDR48 "WD repeat-containing pro... 159 1.5e-08 1
UNIPROTKB|Q32PG3 - symbol:WDR48 "WD repeat-containing pro... 159 1.5e-08 1
UNIPROTKB|E2RJ50 - symbol:WDR48 "Uncharacterized protein"... 159 1.5e-08 1
UNIPROTKB|Q8TAF3 - symbol:WDR48 "WD repeat-containing pro... 159 1.5e-08 1
UNIPROTKB|F2Z5V5 - symbol:WDR48 "Uncharacterized protein"... 159 1.5e-08 1
UNIPROTKB|Q5RAW8 - symbol:WDR48 "WD repeat-containing pro... 159 1.5e-08 1
UNIPROTKB|Q5F3K4 - symbol:WDR48 "WD repeat-containing pro... 159 1.5e-08 1
UNIPROTKB|F1NM37 - symbol:TBL3 "Uncharacterized protein" ... 132 1.7e-08 2
MGI|MGI:1914811 - symbol:Wdr48 "WD repeat domain 48" spec... 158 1.9e-08 1
RGD|1309702 - symbol:Wdr48 "WD repeat domain 48" species:... 158 1.9e-08 1
UNIPROTKB|F1S8U2 - symbol:BTRC "Uncharacterized protein" ... 156 2.0e-08 1
ZFIN|ZDB-GENE-030131-6305 - symbol:fbxw11a "F-box and WD-... 156 2.2e-08 1
UNIPROTKB|Q68DS0 - symbol:DKFZp781N011 "Putative uncharac... 156 2.4e-08 1
UNIPROTKB|F1MVN1 - symbol:BTRC "Uncharacterized protein" ... 156 2.5e-08 1
UNIPROTKB|E2RDC4 - symbol:BTRC "Uncharacterized protein" ... 156 2.7e-08 1
UNIPROTKB|Q9Y297 - symbol:BTRC "F-box/WD repeat-containin... 156 2.7e-08 1
RGD|1359721 - symbol:Btrc "beta-transducin repeat contain... 154 3.4e-08 1
RGD|1309121 - symbol:Fbxw11 "F-box and WD repeat domain c... 153 4.2e-08 1
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 153 4.5e-08 1
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 153 4.5e-08 1
MGI|MGI:1338871 - symbol:Btrc "beta-transducin repeat con... 154 4.6e-08 1
UNIPROTKB|F1LMH8 - symbol:Btrc "Protein Btrc" species:101... 154 4.6e-08 1
UNIPROTKB|F1NYG1 - symbol:BTRC "Uncharacterized protein" ... 154 4.6e-08 1
UNIPROTKB|F1M373 - symbol:Fbxw11 "Protein Fbxw11" species... 153 4.8e-08 1
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 153 4.8e-08 1
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 153 4.8e-08 1
MGI|MGI:2144023 - symbol:Fbxw11 "F-box and WD-40 domain p... 153 5.0e-08 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 153 5.0e-08 1
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 153 5.0e-08 1
UNIPROTKB|F1P5E8 - symbol:FBXW11 "Uncharacterized protein... 151 7.7e-08 1
ZFIN|ZDB-GENE-040426-2903 - symbol:fbxw11b "F-box and WD-... 151 8.0e-08 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 149 8.9e-08 1
UNIPROTKB|I3LQS7 - symbol:RRP9 "Uncharacterized protein" ... 142 1.0e-07 2
DICTYBASE|DDB_G0292834 - symbol:DDB_G0292834 "cyclin-like... 135 1.1e-07 2
UNIPROTKB|F1MRM3 - symbol:RRP9 "Uncharacterized protein" ... 141 1.3e-07 2
MGI|MGI:2384313 - symbol:Rrp9 "RRP9, small subunit (SSU) ... 141 1.6e-07 2
RGD|1307881 - symbol:Rrp9 "ribosomal RNA processing 9, sm... 141 1.7e-07 2
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 128 1.7e-07 2
ASPGD|ASPL0000008575 - symbol:AN6217 species:162425 "Emer... 148 2.2e-07 1
WB|WBGene00004767 - symbol:sel-10 species:6239 "Caenorhab... 147 2.7e-07 1
UNIPROTKB|Q93794 - symbol:sel-10 "F-box/WD repeat-contain... 147 2.7e-07 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 142 2.7e-07 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 148 3.0e-07 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 144 3.3e-07 1
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 116 3.7e-07 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 147 3.9e-07 2
FB|FBgn0023423 - symbol:slmb "supernumerary limbs" specie... 144 4.7e-07 1
UNIPROTKB|O43818 - symbol:RRP9 "U3 small nucleolar RNA-in... 135 5.1e-07 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 116 5.2e-07 2
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 140 6.2e-07 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 140 6.2e-07 1
POMBASE|SPAC630.14c - symbol:tup12 "transcriptional corep... 143 7.8e-07 1
UNIPROTKB|E1BWK2 - symbol:FBXW11 "Uncharacterized protein... 142 8.2e-07 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 138 9.9e-07 1
GENEDB_PFALCIPARUM|PFC0100c - symbol:PFC0100c "regulatory... 142 1.0e-06 1
UNIPROTKB|O97334 - symbol:PFC0100c "Regulatory protein, p... 142 1.0e-06 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 138 1.0e-06 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 137 1.4e-06 1
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 136 1.7e-06 1
UNIPROTKB|Q12788 - symbol:TBL3 "Transducin beta-like prot... 135 2.2e-06 2
CGD|CAL0003392 - symbol:PWP2 species:5476 "Candida albica... 132 2.6e-06 2
UNIPROTKB|Q5A852 - symbol:PWP2 "Putative uncharacterized ... 132 2.6e-06 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 135 3.4e-06 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 136 3.5e-06 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 133 3.8e-06 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 133 3.9e-06 1
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 138 4.1e-06 1
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 137 4.8e-06 1
DICTYBASE|DDB_G0277533 - symbol:DDB_G0277533 "WD40 repeat... 96 5.6e-06 2
TAIR|locus:2096254 - symbol:LRS1 "AT3G05090" species:3702... 136 6.5e-06 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 131 7.1e-06 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 130 7.3e-06 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 132 7.5e-06 1
WARNING: Descriptions of 141 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2024031 [details] [associations]
symbol:AT1G24530 "AT1G24530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006857 "oligopeptide transport"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC000103 HSSP:P16649
HOGENOM:HOG000236376 EMBL:AY045973 EMBL:AY079324 IPI:IPI00540711
RefSeq:NP_564219.1 UniGene:At.15901 ProteinModelPortal:Q9FYL1
SMR:Q9FYL1 STRING:Q9FYL1 PaxDb:Q9FYL1 EnsemblPlants:AT1G24530.1
GeneID:839068 KEGG:ath:AT1G24530 TAIR:At1g24530 InParanoid:Q9FYL1
OMA:REDSANH PhylomeDB:Q9FYL1 ProtClustDB:CLSN2687940
ArrayExpress:Q9FYL1 Genevestigator:Q9FYL1 Uniprot:Q9FYL1
Length = 418
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 159/296 (53%), Positives = 199/296 (67%)
Query: 32 ISCLAVHNSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQD 91
++CLAV+ L+A S +E++++D +H+DTF+ SG+VKS+ F KIFTAHQD
Sbjct: 86 VTCLAVNGGYLFAVSGHEVSIYDR-DMCAHLDTFNGQDPFSGTVKSVGFSGEKIFTAHQD 144
Query: 92 CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151
KI VWK+TA ++ ++TLPT+ DRL R LP NYV VRRHKKRLW+EH DAV+ L V
Sbjct: 145 GKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQVRRHKKRLWIEHADAVTALAVS 204
Query: 152 QGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
G +YSVSWD++ KIW AS+ +C ES+ KAH+ YTGSAD RIRVW +
Sbjct: 205 DGFIYSVSWDKTLKIWRASDLRCKESI-KAHDDAVNAIAVSTNGTVYTGSADRRIRVWAK 263
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE-RDHRMV 270
+ RH LV TL KH+S VNALALN DGS+LFSG CDR I+VWERE + M
Sbjct: 264 PTGE------KRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMA 317
Query: 271 FAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
AL GH A+L L NV DLL SGSADRTVRIW+RG ++ Y C+ L GH KPVK
Sbjct: 318 VRGALRGHDKAILSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVK 373
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 64/243 (26%), Positives = 97/243 (39%)
Query: 80 FHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHK----K 135
F + K + + K R+W +H T V D I SV + + + R K
Sbjct: 174 FALPKNYVQVRRHKKRLWI-----EHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCK 228
Query: 136 RLWLEHWDAVSDLVVK-QGLMYSVSWDRSFKIW----NASNYKCLESVNKAHEXXXXXXX 190
H DAV+ + V G +Y+ S DR ++W + + ++ K
Sbjct: 229 ESIKAHDDAVNAIAVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALAL 288
Query: 191 XXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLL 249
++GS D I VWER E S +M V ++ H + L+L LL
Sbjct: 289 NDDGSVLFSGSCDRSILVWER-------EDTSNYMAVRGALRGHDKAI--LSLFNVSDLL 339
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV-----GDLLA--SGSADRTVR 302
SG DR + +W R D E L GHT + L V D+++ SGS D V+
Sbjct: 340 LSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVK 399
Query: 303 IWQ 305
W+
Sbjct: 400 CWK 402
>TAIR|locus:2032452 [details] [associations]
symbol:AT1G24130 "AT1G24130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC002396 HOGENOM:HOG000236376 IPI:IPI00530155 PIR:T00642
RefSeq:NP_173823.1 UniGene:At.65928 ProteinModelPortal:O48679
SMR:O48679 STRING:O48679 PRIDE:O48679 EnsemblPlants:AT1G24130.1
GeneID:839025 KEGG:ath:AT1G24130 TAIR:At1g24130 InParanoid:O48679
OMA:GFRCVES PhylomeDB:O48679 ProtClustDB:CLSN2914172
Genevestigator:O48679 Uniprot:O48679
Length = 415
Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
Identities = 153/345 (44%), Positives = 203/345 (58%)
Query: 1 MSHLHSVSSEAFKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLN-EINVFD----L 55
+S H SS HHC+A+LK S +S LAV + LLY S N EI V+
Sbjct: 48 LSFQHQSSS--VDHHCLATLKDKSS-----YVSSLAVSDKLLYTGSSNSEIRVWPREPPF 100
Query: 56 ISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKIT-----ASRQHQLVST 110
+YS D + + +G VKS+ K+ +AHQD KIRVWKI ++++ V+T
Sbjct: 101 SPEYSTGDDRNVVANGNGGVKSLVILGDKLISAHQDHKIRVWKIIDESNRRGQKYKCVAT 160
Query: 111 LPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWN 168
LPT+ DR +YV VRRHKK W+ H DAVS L + Q L+YS SWDRSFKIW
Sbjct: 161 LPTMNDRFKTLFSSKSYVEVRRHKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWR 220
Query: 169 ASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVT 228
S++KCL+S+ KAH+ YTGSAD +I+VW NK+ K +H LV
Sbjct: 221 TSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVW-------NKKDK-KHSLVA 272
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWER-----ERDHRMVFAEALWGHTGALL 283
TL KH S VNALA++ DG +L+SG CDR I+VWER + + M AL GH A++
Sbjct: 273 TLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIM 332
Query: 284 CLINVGDLLASGSADRTVRIWQRG--KENCYRCMAFLEGHEKPVK 326
CL DL+ SGSAD+++R+W+RG ++ Y C+A LEGH KPVK
Sbjct: 333 CLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVK 377
Score = 168 (64.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 53/181 (29%), Positives = 87/181 (48%)
Query: 141 HWDAVSDLVV-KQGLMYSVSWDRSFKIWNASNYK--CLESVNKAHEXXXXXXXXXXXXXX 197
H DA++ +VV K G +Y+ S D+ K+WN + K + ++ K
Sbjct: 234 HDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVL 293
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLLFSGGCDR 256
Y+G+ D I VWER + N + + HM V ++ HR + LA+ D L+ SG D+
Sbjct: 294 YSGACDRSILVWERLI---NGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADK 348
Query: 257 WIVVWER---ERDHRMVFAEALWGHTGALLCL-INVGD---------LLASGSADRTVRI 303
+ VW R E++ A L GHT + L ++V D ++ SGS D ++++
Sbjct: 349 SLRVWRRGLMEKEGYSCLA-VLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKV 407
Query: 304 W 304
W
Sbjct: 408 W 408
>TAIR|locus:2170061 [details] [associations]
symbol:AT5G50120 "AT5G50120" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0009733 "response to auxin stimulus" evidence=RCA]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB026650
HOGENOM:HOG000236376 IPI:IPI00531222 RefSeq:NP_199823.1
UniGene:At.9028 ProteinModelPortal:Q9FG99 SMR:Q9FG99 STRING:Q9FG99
EnsemblPlants:AT5G50120.1 GeneID:835077 KEGG:ath:AT5G50120
TAIR:At5g50120 InParanoid:Q9FG99 OMA:RTLKIWR PhylomeDB:Q9FG99
ProtClustDB:CLSN2916602 Genevestigator:Q9FG99 Uniprot:Q9FG99
Length = 388
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 140/339 (41%), Positives = 200/339 (58%)
Query: 5 HSVSSEAFKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLNEI------NVFDLISD 58
H SS H CIA+L + IS L + LY S + + N + +++
Sbjct: 18 HLTSSSQPLHQCIATLVCHTAS----YISSLTLAGKRLYTGSNDGVVRLWNANTLETLAE 73
Query: 59 YS-HVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKIT-------ASRQHQLVST 110
S + D + + G+VKS+ K+FTAHQD KIRVWKI +++ ++T
Sbjct: 74 ASSNGDVITGERGGGGAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLAT 133
Query: 111 LPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV-KQG-LMYSVSWDRSFKIWN 168
+PT+ DR + ++P N V +RRHKK W+ H DAVS L + + G L+YSVSWDR+ KIW
Sbjct: 134 MPTISDRFAKCLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWR 193
Query: 169 ASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVT 228
+++KCLES AH+ YTGS+D RI+VW +++ + N ++K +H LV
Sbjct: 194 TTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVA 253
Query: 229 TLVKHRSTVNALALNG-DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLIN 287
L +H S +NALAL+G +GSLL SGG D I+VWER+ +V L GHT ++LCL
Sbjct: 254 ILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV 313
Query: 288 VGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
V D+L SGSAD+TVR+W+ ++ Y C+A LEGH PVK
Sbjct: 314 VSDILCSGSADKTVRLWKCSAKD-YSCLAMLEGHLGPVK 351
>TAIR|locus:2066276 [details] [associations]
symbol:AT2G26490 "AT2G26490" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 EMBL:AC002505 HOGENOM:HOG000236376
ProtClustDB:CLSN2681936 EMBL:BT015086 EMBL:BT015900 IPI:IPI00520584
PIR:T00982 RefSeq:NP_180217.1 UniGene:At.50101
ProteinModelPortal:O48716 SMR:O48716 STRING:O48716 PaxDb:O48716
PRIDE:O48716 EnsemblPlants:AT2G26490.1 GeneID:817190
KEGG:ath:AT2G26490 TAIR:At2g26490 InParanoid:O48716 OMA:KVSPKNG
PhylomeDB:O48716 ArrayExpress:O48716 Genevestigator:O48716
Uniprot:O48716
Length = 465
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 119/299 (39%), Positives = 175/299 (58%)
Query: 32 ISCLAVHNSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQD 91
I LA LLY S ++ N I + ++ FS +SG VK+I KIFT HQD
Sbjct: 99 IYSLAATKDLLYTGSDSK-N----IRVWKNLKEFSAFKCNSGLVKAIVISGEKIFTGHQD 153
Query: 92 CKIRVWKITASRQ--HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV 149
KIRVWK++ Q H+ TLPT+KD S+ P NYV V++H+ LW++H DAVS L
Sbjct: 154 GKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLS 213
Query: 150 V--KQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIR 207
+ +QGL+YS SWDR+ K+W ++ KCLES+ AH+ ++GSADG ++
Sbjct: 214 LNDEQGLLYSASWDRTIKVWRIADSKCLESI-PAHDDAVNSVVSTTEAIVFSGSADGTVK 272
Query: 208 VWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDH 267
W+R + + ++H L+ TL K S V ALA++ +G+ ++ G D + WERE+
Sbjct: 273 AWKRD----QQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWEREK-- 326
Query: 268 RMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
++ + L GH A+LCL G L+ SGSAD+T+ +W+R N + C++ L GH PVK
Sbjct: 327 QLNYGGILKGHKLAVLCLEVAGSLVFSGSADKTICVWKRDG-NIHTCLSVLTGHTGPVK 384
Score = 153 (58.9 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 50/182 (27%), Positives = 83/182 (45%)
Query: 141 HWDAVSDLV-VKQGLMYSVSWDRSFKIWNA------SNYKCLESVNKAHEXXXXXXXXXX 193
H DAV+ +V + +++S S D + K W + + ++++ K
Sbjct: 247 HDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKN 306
Query: 194 XXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
Y GS+DG + WER E++ + + L H+ V L L GSL+FSG
Sbjct: 307 GAAVYFGSSDGLVNFWER-------EKQLNYGGI--LKGHKLAV--LCLEVAGSLVFSGS 355
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-----------LLASGSADRTVR 302
D+ I VW+R+ + + L GHTG + CL D ++ SGS D++V+
Sbjct: 356 ADKTICVWKRDGNIHTCLS-VLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVK 414
Query: 303 IW 304
+W
Sbjct: 415 VW 416
Score = 37 (18.1 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 73 GSVKSITFHITKIFTAHQDCKIRVWK 98
G + S+ ++T IRVWK
Sbjct: 97 GHIYSLAATKDLLYTGSDSKNIRVWK 122
>TAIR|locus:2010157 [details] [associations]
symbol:AT1G49450 "AT1G49450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC007504
ProtClustDB:CLSN2681936 IPI:IPI00540218 PIR:B96531
RefSeq:NP_175369.1 UniGene:At.28389 ProteinModelPortal:Q9XIB2
SMR:Q9XIB2 STRING:Q9XIB2 PRIDE:Q9XIB2 EnsemblPlants:AT1G49450.1
GeneID:841369 KEGG:ath:AT1G49450 TAIR:At1g49450 InParanoid:Q9XIB2
OMA:WEREKHL PhylomeDB:Q9XIB2 Genevestigator:Q9XIB2 Uniprot:Q9XIB2
Length = 471
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 116/298 (38%), Positives = 171/298 (57%)
Query: 35 LAVHNSLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITF-HITKIFTAHQDC 92
LA LL+ S ++ I V+ + D FS S+SG VK+I ++FT HQD
Sbjct: 140 LAASGDLLFTGSDSKNIRVWKDLKD------FSGFKSTSGFVKAIVVTRDNRVFTGHQDG 193
Query: 93 KIRVWKITASR--QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150
KIRVW+ + ++ V +LPT+K+ L +SV P NYV VRR K L + H+DAVS L +
Sbjct: 194 KIRVWRGSKKNPEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLSL 253
Query: 151 KQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRV 208
+ GL+YS SWD++ K+W S+ KCLES+ +AH+ +TGSADG ++V
Sbjct: 254 NEDLGLLYSGSWDKTLKVWRLSDSKCLESI-EAHDDAVNTVVSGFDDLVFTGSADGTLKV 312
Query: 209 WERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHR 268
W+R V KE K H+LV L+K + V ALA+N ++++ G D + WER++
Sbjct: 313 WKREV--QGKEMK--HVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQK--Y 366
Query: 269 MVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ + GH A+LCL G LL SG AD+ + +W+R + + C++ L HE PVK
Sbjct: 367 LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEGPVK 424
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 63/232 (27%), Positives = 93/232 (40%)
Query: 70 SSSGSVKSITFHITKIFTAHQDCKIRVWK-ITASRQHQLVSTLPTVKDR-LIRSVLPNNY 127
S GS+ ++ +TK ++R K + R VS L +D L+ S +
Sbjct: 209 SRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKIRHFDAVSCLSLNEDLGLLYSGSWDKT 268
Query: 128 VTVRRHKKRLWLE----HWDAVSDLVVK-QGLMYSVSWDRSFKIWNAS------NYKCLE 176
+ V R LE H DAV+ +V L+++ S D + K+W + ++
Sbjct: 269 LKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLVFTGSADGTLKVWKREVQGKEMKHVLVQ 328
Query: 177 SVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236
+ K Y GS+DG + WER ++ H T+ HR
Sbjct: 329 VLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWER-------QKYLTHK--GTIHGHRMA 379
Query: 237 VNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
V LA G SLL SGG D+ I VW+R D L H G + CL V
Sbjct: 380 VLCLATAG--SLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEGPVKCLAAV 429
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 60/264 (22%), Positives = 106/264 (40%)
Query: 73 GSVKSITFHITKIFTAHQDCKIRVWK----ITASRQHQ-LVSTLPTVKDRLIRSVLPNNY 127
G V S+ +FT IRVWK + + V + +D + + +
Sbjct: 135 GHVYSLAASGDLLFTGSDSKNIRVWKDLKDFSGFKSTSGFVKAIVVTRDNRVFTGHQDGK 194
Query: 128 VTVRRHKKRLWLEHWDAVSDL-VVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXX 186
+ V R K+ E + V L +K+ L SV+ ++ N + + +
Sbjct: 195 IRVWRGSKKN-PEKYSRVGSLPTLKEFLTKSVNPRNYVEVRRRKNVLKI----RHFDAVS 249
Query: 187 XXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG 246
Y+GS D ++VW R S + ++ H VN + ++G
Sbjct: 250 CLSLNEDLGLLYSGSWDKTLKVW----------RLSDSKCLESIEAHDDAVNTV-VSGFD 298
Query: 247 SLLFSGGCDRWIVVWERE---RDHRMVFAEALWGHTGALLCL-INVGDLLA-SGSADRTV 301
L+F+G D + VW+RE ++ + V + L A+ L +N+ D + GS+D TV
Sbjct: 299 DLVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTV 358
Query: 302 RIWQRGKENCYRCMAFLEGHEKPV 325
W+R K ++ + GH V
Sbjct: 359 NFWERQKYLTHK--GTIHGHRMAV 380
>TAIR|locus:2015423 [details] [associations]
symbol:AT1G47610 "AT1G47610" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC007519 HOGENOM:HOG000236376 ProtClustDB:CLSN2681936
IPI:IPI00534811 PIR:A96517 RefSeq:NP_175192.1 UniGene:At.47680
ProteinModelPortal:Q9SX94 SMR:Q9SX94 STRING:Q9SX94
EnsemblPlants:AT1G47610.1 GeneID:841170 KEGG:ath:AT1G47610
TAIR:At1g47610 InParanoid:Q9SX94 OMA:CVWRRDG PhylomeDB:Q9SX94
Genevestigator:Q9SX94 Uniprot:Q9SX94
Length = 351
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 117/301 (38%), Positives = 166/301 (55%)
Query: 32 ISCLAVHNSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITF-HITKIFTAHQ 90
I LA N LLY S N + I + +++ FS S+SG VK+I K+FT HQ
Sbjct: 27 IYSLAATNDLLYTGSDN-----NYIRVWKNLNEFSGFKSNSGLVKAIVISREAKVFTGHQ 81
Query: 91 DCKIRVWKITAS--RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVS-- 146
D KIRVWK ++ R + +LP +KD L SV P+NYV VRR + LW++H DAVS
Sbjct: 82 DGKIRVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKHSDAVSCL 141
Query: 147 DLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRI 206
L QGL+YS SWDR+ K+W + KC+ES+ KAH+ +TGSADG +
Sbjct: 142 SLAEDQGLLYSASWDRTVKVWRIHDLKCIESI-KAHDDAVNSVTTAESLV-FTGSADGTV 199
Query: 207 RVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERD 266
+VW+R + + +++ H L TL+K S V AL + ++SG D + WE
Sbjct: 200 KVWKREI----RGKRTAHSLFQTLLKQESAVTALVTSH--MAVYSGSSDGAVNFWEMGDK 253
Query: 267 HRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQR-GKENCYRCMAFLEGHEKPV 325
+ E H A+LC+ G LL SG+AD+ + +W+R GK + C++ L GH PV
Sbjct: 254 KLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRREGK--VHTCVSVLTGHTGPV 311
Query: 326 K 326
K
Sbjct: 312 K 312
Score = 170 (64.9 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 67/237 (28%), Positives = 103/237 (43%)
Query: 92 CKIRVWKITASRQHQLVSTLPTVKDR-LIRSVLPNNYVTVRRHKKRLWLE----HWDAVS 146
C+ +W + VS L +D+ L+ S + V V R +E H DAV+
Sbjct: 126 CRTALW----IKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVN 181
Query: 147 DLVVKQGLMYSVSWDRSFKIWNAS--NYKCLESVNKA--HEXXXXXXXXXXXXXXYTGSA 202
+ + L+++ S D + K+W + S+ + + Y+GS+
Sbjct: 182 SVTTAESLVFTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMAVYSGSS 241
Query: 203 DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE 262
DG + WE ++ +H V KHR V L + G LLFSG D+ I VW
Sbjct: 242 DGAVNFWEMG-----DKKLLKHCEV--FKKHRLAV--LCIAAAGKLLFSGAADKKICVWR 292
Query: 263 RE-RDHRMVFAEALWGHTGALLCLINV----------GD---LLASGSADRTVRIWQ 305
RE + H V L GHTG + CL V GD +L SGS D++V++W+
Sbjct: 293 REGKVHTCV--SVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWR 347
Score = 49 (22.3 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 54 DLISDYSHVDTFSNDL-SSSGSVKSITFHITKIFTAHQDCKIRVWK 98
DL YS D+ ++ G + S+ ++T + IRVWK
Sbjct: 5 DLTRGYSDGDSLVGEIVREEGHIYSLAATNDLLYTGSDNNYIRVWK 50
>TAIR|locus:2083710 [details] [associations]
symbol:AT3G51930 "AT3G51930" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AL049711 HOGENOM:HOG000236376 EMBL:BT008335
EMBL:AK228303 IPI:IPI00547415 PIR:T49072 RefSeq:NP_190761.1
UniGene:At.35344 ProteinModelPortal:Q9SV11 SMR:Q9SV11 STRING:Q9SV11
PRIDE:Q9SV11 EnsemblPlants:AT3G51930.1 GeneID:824356
KEGG:ath:AT3G51930 TAIR:At3g51930 InParanoid:Q9SV11 OMA:SKVFTAH
PhylomeDB:Q9SV11 ProtClustDB:CLSN2684735 Genevestigator:Q9SV11
Uniprot:Q9SV11
Length = 415
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 108/309 (34%), Positives = 178/309 (57%)
Query: 32 ISCLAVHNSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQD 91
+S LA+ L +AS + ++ ++ + F+ GSVK++ +K+FTAHQD
Sbjct: 64 VSSLALCGEFLLSASQGK-DI--IVWQQPDLKIFAKFGQGDGSVKALVSVGSKVFTAHQD 120
Query: 92 CKIRVWKIT---ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148
+IRVWK++ + +LV TLPT KD L + + +NYV RR+ KRLW+EH D++S L
Sbjct: 121 SRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWIEHADSISCL 180
Query: 149 VVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRV 208
V G++YS SWD++ K+W S+ KCLES+ KAH+ Y+ SADG++++
Sbjct: 181 AVHAGIIYSGSWDKTLKVWRLSDLKCLESI-KAHDDAINGLVAGDGRV-YSASADGKVKI 238
Query: 209 W---ERSVVDHNKERKSR-HMLVTTLV-KHRSTVNALALNGDGSLLFSGGCDRWIVVWER 263
W +R ++ S H+L TL + +VN++ ++GDG+ ++ GG D +++ WE+
Sbjct: 239 WGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEK 298
Query: 264 ER------DHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAF 317
+ + R+ F GH A+LC+ VG+++ SGSAD+++ +W+R
Sbjct: 299 KEKEGDFEEWRLGFETR--GHNMAVLCMCVVGEMVCSGSADKSIGLWRREVTGMLCKFGV 356
Query: 318 LEGHEKPVK 326
+ GHE PVK
Sbjct: 357 IHGHEGPVK 365
Score = 132 (51.5 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 49/191 (25%), Positives = 79/191 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVN---------------KAHEXX 185
H DA++ LV G +YS S D KIW K +ES + +A
Sbjct: 213 HDDAINGLVAGDGRVYSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSV 272
Query: 186 XXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD 245
Y G +DG + WE+ + + E + R T H V + + G+
Sbjct: 273 NSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFE-EWRLGFETR--GHNMAVLCMCVVGE 329
Query: 246 GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL------INVGDLLASGSADR 299
++ SG D+ I +W RE + + GH G + CL + G +L SG D+
Sbjct: 330 --MVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPNNVGAGFMLYSGGLDK 387
Query: 300 TVRIWQRGKEN 310
++R+W K++
Sbjct: 388 SLRVWWVPKQD 398
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 111/301 (36%), Positives = 172/301 (57%)
Query: 32 ISCLAVHNSLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQ 90
I LA LLY S ++ I V+ + +++ F SSSG +K+I +IFT HQ
Sbjct: 128 IYSLAASGDLLYTGSDSKNIRVWKNLKEHAG---FK---SSSGLIKAIVIFGDRIFTGHQ 181
Query: 91 DCKIRVWKITASR--QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148
D KIR+WK++ + +H+ V TLPT K + SV P +++ VRR++ + +H DAVS L
Sbjct: 182 DGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTKHNDAVSSL 241
Query: 149 V--VKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRI 206
V+ GL+YS SWD + K+W ++ KCLES++ AH+ +TGSADG +
Sbjct: 242 SLDVELGLLYSSSWDTTIKVWRIADSKCLESIH-AHDDAINSVMSGFDDLVFTGSADGTV 300
Query: 207 RVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERD 266
+VW+R + + + ++H L L+K + V ALA+ S+++ G D + WER +
Sbjct: 301 KVWKREL----QGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSK- 355
Query: 267 HRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRG-KENCYRCMAFLEGHEKPV 325
R L GH A+LCL G+LL SGSAD+ + +W+R + ++C++ L GH PV
Sbjct: 356 -RSFTGGILKGHKSAVLCLGIAGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPV 414
Query: 326 K 326
K
Sbjct: 415 K 415
>TAIR|locus:2074825 [details] [associations]
symbol:AT3G50390 "AT3G50390" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BT030030 IPI:IPI00547079
RefSeq:NP_190608.2 UniGene:At.50263 ProteinModelPortal:A2RVN9
SMR:A2RVN9 STRING:A2RVN9 PRIDE:A2RVN9 EnsemblPlants:AT3G50390.1
GeneID:824203 KEGG:ath:AT3G50390 TAIR:At3g50390
HOGENOM:HOG000236376 InParanoid:A2RVN9 OMA:HKKLLQF PhylomeDB:A2RVN9
ProtClustDB:CLSN2681936 Genevestigator:A2RVN9 Uniprot:A2RVN9
Length = 469
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 120/306 (39%), Positives = 172/306 (56%)
Query: 32 ISCLAVHNSLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQ 90
I LA LLY S ++ I V+ +HV+ FS+ S+SG VK+I KIFT HQ
Sbjct: 101 IYSLATSGDLLYTGSDSKNIRVWK-----NHVE-FSSFKSNSGLVKAIVLAGDKIFTGHQ 154
Query: 91 DCKIRVWKITA--SRQHQLVSTLPTVKDRLIRSVLPNNYVT-VRRHKKR--LWLEHWDAV 145
D KIRVWK + S H+ V T+P + D + S++P++Y RR++ L H DA+
Sbjct: 155 DGKIRVWKAASKESNVHRRVGTMPNLLDYIRNSIVPSSYFNFTRRNRSSAALGFRHLDAI 214
Query: 146 SDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSAD 203
S L + + L+YS SWD++FK+W S+ +C+ESVN AHE +TGSAD
Sbjct: 215 SCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVN-AHEDAVNAVVSGFDGLVFTGSAD 273
Query: 204 GRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWER 263
G ++VW R D K+ K H TL+K V A+A++ +L++ G D + WER
Sbjct: 274 GTVKVWRRE--DQAKDTK--HFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWER 329
Query: 264 ERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQR---GKENCYRCMAFLEG 320
E + M L GH A+LCL+ G+L+ SGSAD +R+W+R G E+ C++ L G
Sbjct: 330 ENN--MKNGGVLKGHKLAVLCLVAAGNLMFSGSADLGIRVWRRPEGGGEHV--CLSVLTG 385
Query: 321 HEKPVK 326
H PVK
Sbjct: 386 HAGPVK 391
Score = 142 (55.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 55/183 (30%), Positives = 80/183 (43%)
Query: 141 HWDAVSDLVVK-QGLMYSVSWDRSFKIWN----ASNYKCL--ESVNKAHEXXXXXXXXXX 193
H DAV+ +V GL+++ S D + K+W A + K E++ K
Sbjct: 252 HEDAVNAVVSGFDGLVFTGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQS 311
Query: 194 XXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
Y GS+DG + WER ++N + L H+ V L L G+L+FSG
Sbjct: 312 ATLVYCGSSDGTVNFWER---ENNMKNGG------VLKGHKLAV--LCLVAAGNLMFSGS 360
Query: 254 CDRWIVVWER-ERDHRMVFAEALWGHTGALLCLINVGD----------LLASGSADRTVR 302
D I VW R E V L GH G + CL D ++ SGS DR+V+
Sbjct: 361 ADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSLDRSVK 420
Query: 303 IWQ 305
+W+
Sbjct: 421 MWR 423
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 73 GSVKSITFHITKIFTAHQDCKIRVWK 98
G + S+ ++T IRVWK
Sbjct: 99 GHIYSLATSGDLLYTGSDSKNIRVWK 124
>TAIR|locus:2085929 [details] [associations]
symbol:AT3G18950 "AT3G18950" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AP000735
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005434
EMBL:AK117650 IPI:IPI00535619 RefSeq:NP_188525.1 UniGene:At.38474
ProteinModelPortal:Q9LJ71 SMR:Q9LJ71 STRING:Q9LJ71
EnsemblPlants:AT3G18950.1 GeneID:821427 KEGG:ath:AT3G18950
TAIR:At3g18950 InParanoid:Q9LJ71 OMA:LAINQES PhylomeDB:Q9LJ71
Genevestigator:Q9LJ71 Uniprot:Q9LJ71
Length = 473
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 110/298 (36%), Positives = 170/298 (57%)
Query: 35 LAVHNSLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFH-ITKIFTAHQDC 92
LA LL+ S ++ I V+ + D++ F S+SG VK+I +IFT HQD
Sbjct: 144 LAASGDLLFTGSDSKNIRVWKDLKDHTG---FK---STSGLVKAIVITGDNRIFTGHQDG 197
Query: 93 KIRVWKITASRQ--HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150
KIRVW+ + R + + +LPT+K+ L +SV P NYV VRR K L + H+DAVS L +
Sbjct: 198 KIRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCLSL 257
Query: 151 KQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRV 208
+ GL+YS SWD++ K+W S+ KCLES+ +AH+ +TGSADG ++V
Sbjct: 258 NEELGLLYSGSWDKTLKVWRLSDSKCLESI-QAHDDAINTVAAGFDDLLFTGSADGTLKV 316
Query: 209 WERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHR 268
W+R + + + ++H LV L+K + V ALA+N ++++ G D + WE ++
Sbjct: 317 WKREL----QGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQK--Y 370
Query: 269 MVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ L GH A+LCL G L+ SG AD+ + +W+R + + C++ L H PVK
Sbjct: 371 LSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVK 428
Score = 141 (54.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 67/263 (25%), Positives = 106/263 (40%)
Query: 70 SSSGSVKSITFHITKIFTAHQDCKIRVWK-ITASRQHQLVSTLPTVKDR-LIRSVLPNNY 127
S GS+ ++ +TK ++R K + R + VS L ++ L+ S +
Sbjct: 213 SRIGSLPTLKEFLTKSVNPKNYVEVRRRKNVLKIRHYDAVSCLSLNEELGLLYSGSWDKT 272
Query: 128 VTVRRHKKRLWLE----HWDAVSDLVVK-QGLMYSVSWDRSFKIWN------ASNYKCLE 176
+ V R LE H DA++ + L+++ S D + K+W + + +
Sbjct: 273 LKVWRLSDSKCLESIQAHDDAINTVAAGFDDLLFTGSADGTLKVWKRELQGKGTKHFLVN 332
Query: 177 SVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWE-RSVVDHNKERKSRHMLVTTLVKHRS 235
+ K Y GS+DG + WE + + H TL HR
Sbjct: 333 VLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGG----------TLRGHRL 382
Query: 236 TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV------- 288
V L L GSL+ SGG D+ I VW R D L H G + CL V
Sbjct: 383 AV--LCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGH 440
Query: 289 ---GD---LLASGSADRTVRIWQ 305
GD ++ SGS D++V++W+
Sbjct: 441 REKGDQKWIVYSGSLDKSVKVWR 463
>UNIPROTKB|F1NEH1 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000185 "activation of
MAPKKK activity" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 Pfam:PF00097
Prosite:PS00518 GO:GO:0043231 GO:GO:0005886 GO:GO:0006915
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 GO:GO:0000185
OMA:ALCIQGN EMBL:AADN02023658 EMBL:AADN02023655 EMBL:AADN02023656
EMBL:AADN02023657 IPI:IPI00600547 Ensembl:ENSGALT00000009263
ArrayExpress:F1NEH1 Uniprot:F1NEH1
Length = 670
Score = 196 (74.1 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 82/295 (27%), Positives = 127/295 (43%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 395 HQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGNK 451
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 452 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 511
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ N +C+ + +
Sbjct: 512 LKKELTGLNHW--VRALVASQNYLYSGSY-QTIKIWDIRNLECVHVLQTS--GGSVYSIA 566
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ KE+ V TL H TV ALA+ D + +
Sbjct: 567 VTNHHIVCGTYENLIHVWD---IE-TKEQ------VRTLTGHVGTVYALAVISTPDQTKV 616
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 617 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 128 (50.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 391 TFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 448
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G+ L SGSAD T+ +W +N + + H+ PV
Sbjct: 449 GNKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 482
>ZFIN|ZDB-GENE-070112-2212 [details] [associations]
symbol:traf7 "TNF receptor-associated factor 7"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 Pfam:PF00097 Prosite:PS00518
ZFIN:ZDB-GENE-070112-2212 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:BX572621 EMBL:CR450851 EMBL:BC129220
IPI:IPI00488353 RefSeq:NP_001073654.1 UniGene:Dr.124692
Ensembl:ENSDART00000084579 Ensembl:ENSDART00000132703 GeneID:563746
KEGG:dre:563746 InParanoid:A1L1U9 NextBio:20885047 Uniprot:A1L1U9
Length = 639
Score = 191 (72.3 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 81/295 (27%), Positives = 129/295 (43%)
Query: 28 HHMIISCLAVHNS--LLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V+++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 364 HQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGNK 420
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 421 LYSGSADCTIIVWDIQTLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 480
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ + +C+ + +
Sbjct: 481 LKKELTGLNHW--VRALVASQNHLYSGSY-QTIKIWDIRSLECVHVLQTS--GGSVYSIA 535
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 536 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 585
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 586 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 637
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 360 TFVGHQGPVWCLCVYSTGDLLFSGSSDKSIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 417
Query: 289 GDLLASGSADRTVRIW 304
G+ L SGSAD T+ +W
Sbjct: 418 GNKLYSGSADCTIIVW 433
>MGI|MGI:3042141 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000185 "activation of MAPKKK activity"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=ISA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 UniPathway:UPA00143 MGI:MGI:3042141 Pfam:PF00097
Prosite:PS00518 GO:GO:0006915 GO:GO:0006355 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016023
GO:GO:0043410 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GO:GO:0000185 GermOnline:ENSMUSG00000052752 HOGENOM:HOG000220840
HOVERGEN:HBG055270 EMBL:BC005649 EMBL:BC008598 IPI:IPI00474463
UniGene:Mm.275150 ProteinModelPortal:Q922B6 SMR:Q922B6
STRING:Q922B6 PaxDb:Q922B6 PRIDE:Q922B6 UCSC:uc008awq.2
NextBio:377255 Bgee:Q922B6 CleanEx:MM_TRAF7 Genevestigator:Q922B6
Uniprot:Q922B6
Length = 594
Score = 188 (71.2 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 81/295 (27%), Positives = 126/295 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 319 HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCK 375
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 376 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 435
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 436 LKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 490
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 491 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 540
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 541 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 592
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 315 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 372
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 373 GCKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 406
>RGD|1559653 [details] [associations]
symbol:Traf7 "TNF receptor-associated factor 7, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=ISO] [GO:0000185 "activation of
MAPKKK activity" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043410 "positive regulation of MAPK
cascade" evidence=ISO] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 RGD:1559653 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 IPI:IPI00198753 ProteinModelPortal:D4A5P7
Ensembl:ENSRNOT00000004222 UCSC:RGD:1559653 ArrayExpress:D4A5P7
Uniprot:D4A5P7
Length = 629
Score = 188 (71.2 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 81/295 (27%), Positives = 126/295 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 354 HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCK 410
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 411 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 470
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 471 LKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 525
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 526 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 575
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 576 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 627
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 350 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 407
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 408 GCKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 441
>UNIPROTKB|E2QXW8 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849
GO:GO:0000185 CTD:84231 KO:K10646 OMA:ALCIQGN EMBL:AAEX03004625
RefSeq:XP_852015.1 ProteinModelPortal:E2QXW8
Ensembl:ENSCAFT00000030876 GeneID:609824 KEGG:cfa:609824
NextBio:20895405 Uniprot:E2QXW8
Length = 670
Score = 188 (71.2 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 81/295 (27%), Positives = 126/295 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 395 HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCK 451
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 452 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 511
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 512 LKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 566
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 567 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 616
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 617 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 391 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 448
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 449 GCKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 482
>UNIPROTKB|Q6Q0C0 [details] [associations]
symbol:TRAF7 "E3 ubiquitin-protein ligase TRAF7"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0008270 "zinc
ion binding" evidence=NAS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0000185 "activation of MAPKKK activity"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0006915 "apoptotic process" evidence=IDA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001293 InterPro:IPR001841
InterPro:IPR018957 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50145
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0006355 GO:GO:0042981 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016023 GO:GO:0043410 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 InterPro:IPR017907
SUPFAM:SSF49599 Gene3D:3.90.890.10 GO:GO:0000185 EMBL:AY569455
EMBL:AL136921 IPI:IPI00395631 IPI:IPI00470778 RefSeq:NP_115647.2
UniGene:Hs.713632 ProteinModelPortal:Q6Q0C0 SMR:Q6Q0C0
IntAct:Q6Q0C0 MINT:MINT-1161375 STRING:Q6Q0C0 PhosphoSite:Q6Q0C0
DMDM:54036486 PaxDb:Q6Q0C0 PRIDE:Q6Q0C0 Ensembl:ENST00000326181
GeneID:84231 KEGG:hsa:84231 UCSC:uc002cow.3 CTD:84231
GeneCards:GC16P002205 HGNC:HGNC:20456 HPA:HPA041229 MIM:606692
neXtProt:NX_Q6Q0C0 PharmGKB:PA134917323 HOGENOM:HOG000220840
HOVERGEN:HBG055270 InParanoid:Q6Q0C0 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 PhylomeDB:Q6Q0C0 ChiTaRS:TRAF7 GenomeRNAi:84231
NextBio:73692 ArrayExpress:Q6Q0C0 Bgee:Q6Q0C0 CleanEx:HS_TRAF7
Genevestigator:Q6Q0C0 GermOnline:ENSG00000131653 Uniprot:Q6Q0C0
Length = 670
Score = 188 (71.2 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 79/295 (26%), Positives = 129/295 (43%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 395 HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCK 451
Query: 85 IFTAHQDCKIRVW------KITASRQHQ-----LVSTLPTVKDRLIRSVLPNNYV-TVRR 132
+++ DC I VW K+ R H LVS+ + ++++ + V T +
Sbjct: 452 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKAIKVWDIVGTELK 511
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 512 LKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 566
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 567 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 616
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 617 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 391 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 448
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 449 GCKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 482
>UNIPROTKB|Q5EA56 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000185 "activation of MAPKKK activity" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001293
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184 SMART:SM00320
Pfam:PF00097 Prosite:PS00518 GO:GO:0043231 GO:GO:0005886
GO:GO:0006915 GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043410
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 GO:GO:0000185 CTD:84231
HOGENOM:HOG000220840 HOVERGEN:HBG055270 KO:K10646 OMA:ALCIQGN
OrthoDB:EOG4BRWK8 EMBL:DAAA02057310 EMBL:DAAA02057311 EMBL:BT020713
IPI:IPI00696466 RefSeq:NP_001019692.1 UniGene:Bt.2084 STRING:Q5EA56
Ensembl:ENSBTAT00000025393 GeneID:511692 KEGG:bta:511692
InParanoid:Q5EA56 NextBio:20870056 Uniprot:Q5EA56
Length = 669
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 81/295 (27%), Positives = 126/295 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 394 HQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCK 450
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 451 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 510
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 511 LKKELTGLNHW--VRALVAAQTYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 565
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 566 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 615
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 616 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 667
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 390 TFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 447
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 448 GCKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 481
>UNIPROTKB|I3LMJ3 [details] [associations]
symbol:LOC100738291 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR008974 InterPro:IPR013323 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50145 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004842 SUPFAM:SSF49599 Gene3D:3.90.890.10
GeneTree:ENSGT00690000101849 EMBL:FP102909
Ensembl:ENSSSCT00000027206 Uniprot:I3LMJ3
Length = 512
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 80/295 (27%), Positives = 126/295 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ +
Sbjct: 237 HQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCR 293
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 294 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDIVGTELK 353
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 354 LKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 408
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 409 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 458
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 459 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 510
Score = 124 (48.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 233 TFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 290
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 291 GCRLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 324
>UNIPROTKB|F1P0J6 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 EMBL:AADN02023658
EMBL:AADN02023655 EMBL:AADN02023656 EMBL:AADN02023657
IPI:IPI00822582 Ensembl:ENSGALT00000040411 ArrayExpress:F1P0J6
Uniprot:F1P0J6
Length = 660
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 81/294 (27%), Positives = 126/294 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ K
Sbjct: 385 HQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGNK 441
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 442 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELK 501
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ N +C+ + +
Sbjct: 502 LKKELTGLNHW--VRALVASQNYLYSGSY-QTIKIWDIRNLECVHVLQTS--GGSVYSIA 556
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ KE+ V TL H TV ALA+ D + +
Sbjct: 557 VTNHHIVCGTYENLIHVWD---IE-TKEQ------VRTLTGHVGTVYALAVISTPDQTKV 606
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRI 303
FS DR + VW + M+ + L H G++ L L SG+ D TV++
Sbjct: 607 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKV 657
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 381 TFVGHQGPVWCLCVYSIGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 438
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G+ L SGSAD T+ +W +N + + H+ PV
Sbjct: 439 GNKLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 472
>UNIPROTKB|F1RFA9 [details] [associations]
symbol:TRAF7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001293 InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008974
InterPro:IPR013323 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50089 PROSITE:PS50145 PROSITE:PS50294 SMART:SM00184
SMART:SM00320 Pfam:PF00097 Prosite:PS00518 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 InterPro:IPR017907 SUPFAM:SSF49599
Gene3D:3.90.890.10 GeneTree:ENSGT00690000101849 CTD:84231 KO:K10646
OMA:ALCIQGN EMBL:FP102350 RefSeq:XP_003124781.1 UniGene:Ssc.21218
Ensembl:ENSSSCT00000008814 GeneID:100516964 KEGG:ssc:100516964
Uniprot:F1RFA9
Length = 670
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 80/295 (27%), Positives = 126/295 (42%)
Query: 28 HHMIISCLAVHN--SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84
H + CL V++ LL++ S ++ I V+D + Y T G V ++ +
Sbjct: 395 HQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGH---DGIVLALCIQGCR 451
Query: 85 IFTAHQDCKIRVW------KITASRQHQL-VSTLPTVKDRLIRSVLPNNYV-----TVRR 132
+++ DC I VW K+ R H V TL + + L L V T +
Sbjct: 452 LYSGSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNLLFSGSLKAIKVWDIVGTELK 511
Query: 133 HKKRLW-LEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L L HW V LV Q +YS S+ ++ KIW+ C+ + +
Sbjct: 512 LKKELTGLNHW--VRALVAAQSYLYSGSY-QTIKIWDIRTLDCIHVLQTS--GGSVYSIA 566
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLL 249
G+ + I VW+ ++ +KE+ V TL H TV ALA+ D + +
Sbjct: 567 VTNHHIVCGTYENLIHVWD---IE-SKEQ------VRTLTGHVGTVYALAVISTPDQTKV 616
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
FS DR + VW + M+ + L H G++ L L SG+ D TV++W
Sbjct: 617 FSASYDRSLRVWSMDN---MICTQTLLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 34/97 (35%), Positives = 48/97 (49%)
Query: 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288
T V H+ V L + G LLFSG D+ I VW+ ++ + L GH G +L L
Sbjct: 391 TFVGHQGPVWCLCVYSVGDLLFSGSSDKTIKVWDTCTTYKC--QKTLEGHDGIVLALCIQ 448
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G L SGSAD T+ +W +N + + H+ PV
Sbjct: 449 GCRLYSGSADCTIIVWDI--QNLQKVNT-IRAHDNPV 482
>ZFIN|ZDB-GENE-061110-55 [details] [associations]
symbol:zgc:153492 "zgc:153492" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-061110-55 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR021772 Pfam:PF11816
GeneTree:ENSGT00520000055738 EMBL:CABZ01090140 EMBL:CU633479
IPI:IPI00509466 Ensembl:ENSDART00000105610 Bgee:F1R8P7
Uniprot:F1R8P7
Length = 524
Score = 155 (59.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 46/189 (24%), Positives = 91/189 (48%)
Query: 141 HWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D V+D+V+ G + S S D + K+WNA C+ ++ +
Sbjct: 73 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 132
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ D +I +W+ + + + + ++L ++ ++ +LA+N G+++ SG ++ +
Sbjct: 133 SAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVL 191
Query: 259 VVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMA 316
VW+ +++ L GHT + L L G SGS+D T+R+W G++ RC+A
Sbjct: 192 RVWDPRTCAKLM---KLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQ---RCIA 245
Query: 317 FLEGHEKPV 325
H++ V
Sbjct: 246 TYRVHDEGV 254
Score = 117 (46.2 bits), Expect = 0.00051, P = 0.00051
Identities = 42/182 (23%), Positives = 78/182 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK--CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERS 212
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA- 103
Query: 213 VVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------D 266
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 104 ---H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTAS 154
Query: 267 HRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKP 324
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 NNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTDN 211
Query: 325 VK 326
VK
Sbjct: 212 VK 213
Score = 51 (23.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 82 ITKIFTAHQDCKIRVWKITASRQHQLVS 109
+ ++FTA +D IR+W + + + S
Sbjct: 42 LNRLFTAGRDSIIRIWSVNQHKDPYIAS 69
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 162 (62.1 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 59/215 (27%), Positives = 95/215 (44%)
Query: 116 DRLIRSVLPNNYVTVRRHK----KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASN 171
D+++ S L +N + + K R+ H +V L ++ S S D + ++W+
Sbjct: 233 DKIV-SGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVET 291
Query: 172 YKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV 231
+C++++ H T S D I VW+ +V ++ R +LV
Sbjct: 292 GECIKTL--IHHCEAVLHLRFANGIMVTCSKDRSIAVWD--MVSP-RDITIRRVLVG--- 343
Query: 232 KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDL 291
HR+ VN + D + S DR I VW + + F L GH + CL G L
Sbjct: 344 -HRAAVNVVDF--DDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHRRGIACLQYRGRL 397
Query: 292 LASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ SGS+D T+R+W C R LEGHE+ V+
Sbjct: 398 VVSGSSDNTIRLWDIHSGVCLRV---LEGHEELVR 429
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
+D+N +R + + + ++ L D + SG D I +W+R +D+ +
Sbjct: 201 IDNNWKR-GNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDR-KDYSC--SR 256
Query: 274 ALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCM 315
L GHTG++LCL ++ SGS+D TVR+W C + +
Sbjct: 257 ILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTL 298
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 162 (62.1 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 59/215 (27%), Positives = 95/215 (44%)
Query: 116 DRLIRSVLPNNYVTVRRHK----KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASN 171
D+++ S L +N + + K R+ H +V L ++ S S D + ++W+
Sbjct: 233 DKIV-SGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVET 291
Query: 172 YKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV 231
+C++++ H T S D I VW+ +V ++ R +LV
Sbjct: 292 GECIKTL--IHHCEAVLHLRFANGIMVTCSKDRSIAVWD--MVSP-RDITIRRVLVG--- 343
Query: 232 KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDL 291
HR+ VN + D + S DR I VW + + F L GH + CL G L
Sbjct: 344 -HRAAVNVVDF--DDRYIVSASGDRTIKVWSMDT---LEFVRTLAGHRRGIACLQYRGRL 397
Query: 292 LASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ SGS+D T+R+W C R LEGHE+ V+
Sbjct: 398 VVSGSSDNTIRLWDIHSGVCLRV---LEGHEELVR 429
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
+D+N +R + + + ++ L D + SG D I +W+R +D+ +
Sbjct: 201 IDNNWKR-GNYKMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDR-KDYSC--SR 256
Query: 274 ALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCM 315
L GHTG++LCL ++ SGS+D TVR+W C + +
Sbjct: 257 ILSGHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTL 298
>ZFIN|ZDB-GENE-030131-6622 [details] [associations]
symbol:wdr48 "WD repeat domain 48" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-6622
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 EMBL:BX284666
EMBL:BC057489 IPI:IPI00498668 RefSeq:NP_999874.1 UniGene:Dr.5219
ProteinModelPortal:Q6PFM9 Ensembl:ENSDART00000056248 GeneID:334682
KEGG:dre:334682 InParanoid:Q6PFM9 OMA:IVQCHIL NextBio:20810509
Bgee:Q6PFM9 Uniprot:Q6PFM9
Length = 677
Score = 161 (61.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+++ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIILCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L L G SGS+D T
Sbjct: 177 NQTGTVIISGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKSLLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
>UNIPROTKB|Q05B17 [details] [associations]
symbol:wdr48 "WD repeat-containing protein 48" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 HOGENOM:HOG000007343
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:BC123017
RefSeq:NP_001072858.1 UniGene:Str.41632 ProteinModelPortal:Q05B17
STRING:Q05B17 Ensembl:ENSXETT00000009249 GeneID:780319
KEGG:xtr:780319 Xenbase:XB-GENE-976371 Bgee:Q05B17 Uniprot:Q05B17
Length = 678
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/204 (23%), Positives = 98/204 (48%)
Query: 130 VRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAHE 183
V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++ +
Sbjct: 59 VNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKD 118
Query: 184 XXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALN 243
+ D +I +W+ + + + + ++L ++ ++ +LA+N
Sbjct: 119 YVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAMN 177
Query: 244 GDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTV 301
G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T+
Sbjct: 178 QMGTVIVSGSTEKVLRVWDPRTCQKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGTI 234
Query: 302 RIWQRGKENCYRCMAFLEGHEKPV 325
R+W G++ RC+A H++ V
Sbjct: 235 RLWSLGQQ---RCIATYRVHDEGV 255
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 43/183 (23%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IWN + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWNVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQMGTVIVSGSTEKVLRVWD--PRTCQKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|Q4R2Z6 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9541
"Macaca fascicularis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0016579 "protein deubiquitination" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764
GO:GO:0016579 InterPro:IPR021772 Pfam:PF11816 HOVERGEN:HBG079413
EMBL:AB179472 ProteinModelPortal:Q4R2Z6 PRIDE:Q4R2Z6 Uniprot:Q4R2Z6
Length = 622
Score = 159 (61.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00084, P = 0.00084
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 58/240 (24%), Positives = 103/240 (42%)
Query: 83 TKIFTAHQDCKIRVWKITASRQ------H--QLVS-TLPTVKDRLIRSVLPNNYVTVRR- 132
T + T D ++W I + + H +++S + T +R+I + VTV
Sbjct: 190 TLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHT-VTVWEA 248
Query: 133 ---HKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXX 187
K + H +S V L+ + S D++ K+W+A N KC+ ++ +
Sbjct: 249 DTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILD 308
Query: 188 XXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
T SADG R++ + +E VT L H ++ ++ N G+
Sbjct: 309 SCFDYTGKLIATASADGTARIFSAAT----RE------CVTKLEGHEGEISKISFNPQGN 358
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALL-CLINV-GDLLASGSADRTVRIWQ 305
L +G D+ +W+ + + + L GHT + C N GD++ +GS D T RIW+
Sbjct: 359 RLLTGSSDKTARIWDAQTGQCL---QVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIWR 415
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/169 (24%), Positives = 73/169 (43%)
Query: 159 SWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNK 218
S+D++ K+W+ KC + TGS D ++W+ + +
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD---IQSGE 210
Query: 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH 278
E V TL H + + +L+ N G+ + +G D + VWE + R V+ L GH
Sbjct: 211 E-------VFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG-RKVYT--LIGH 260
Query: 279 TGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ + D L+ +GS D+T ++W +C+A L GH+ +
Sbjct: 261 CAEISSAVFNWDCSLILTGSMDKTCKLWDAVNG---KCVATLTGHDDEI 306
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 45/171 (26%), Positives = 72/171 (42%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ + S D + K+W+ + + + ++ TGS D + VWE
Sbjct: 191 LVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADT 250
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
RK V TL+ H + +++ N D SL+ +G D+ +W+ +
Sbjct: 251 -----GRK-----VYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVA--- 297
Query: 274 ALWGHTGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322
L GH +L C G L+A+ SAD T RI+ C + LEGHE
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATREC---VTKLEGHE 345
>UNIPROTKB|F1MV75 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 InterPro:IPR021772
Pfam:PF11816 IPI:IPI00697548 UniGene:Bt.64382
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:DAAA02053659
EMBL:DAAA02053660 EMBL:DAAA02053661 Ensembl:ENSBTAT00000004876
Uniprot:F1MV75
Length = 677
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|Q32PG3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005764 "lysosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 HSSP:P63005 EMBL:BC108126
IPI:IPI00697548 RefSeq:NP_001069992.1 UniGene:Bt.64382
ProteinModelPortal:Q32PG3 STRING:Q32PG3 GeneID:618860
KEGG:bta:618860 CTD:57599 HOGENOM:HOG000007343 InParanoid:Q32PG3
OrthoDB:EOG4HHP1W NextBio:20901375 Uniprot:Q32PG3
Length = 677
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|E2RJ50 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016579 "protein deubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:AAEX03013494
RefSeq:XP_860103.1 ProteinModelPortal:E2RJ50 SMR:E2RJ50
PRIDE:E2RJ50 Ensembl:ENSCAFT00000008168 GeneID:477027
KEGG:cfa:477027 NextBio:20852578 Uniprot:E2RJ50
Length = 677
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|Q8TAF3 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9606
"Homo sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0019048 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W HOVERGEN:HBG079413 OMA:NRLYSAG EMBL:AF468833
EMBL:AB040882 EMBL:AK297349 EMBL:AK298810 EMBL:AK302307
EMBL:AL162064 EMBL:AL832926 EMBL:BX649170 EMBL:BC026353
EMBL:BC037168 IPI:IPI00658079 IPI:IPI00658210 IPI:IPI00791758
IPI:IPI00792902 IPI:IPI00937128 PIR:T47168 RefSeq:NP_065890.1
UniGene:Hs.109778 ProteinModelPortal:Q8TAF3 SMR:Q8TAF3
IntAct:Q8TAF3 STRING:Q8TAF3 PhosphoSite:Q8TAF3 DMDM:74760390
PaxDb:Q8TAF3 PeptideAtlas:Q8TAF3 PRIDE:Q8TAF3
Ensembl:ENST00000302313 Ensembl:ENST00000396258
Ensembl:ENST00000544962 GeneID:57599 KEGG:hsa:57599 UCSC:uc003cit.3
UCSC:uc011ayt.1 UCSC:uc011ayu.1 UCSC:uc011ayv.1
GeneCards:GC03P039069 HGNC:HGNC:30914 HPA:HPA038421 MIM:612167
neXtProt:NX_Q8TAF3 PharmGKB:PA134956949 InParanoid:Q8TAF3
ChiTaRS:WDR48 GenomeRNAi:57599 NextBio:64214 ArrayExpress:Q8TAF3
Bgee:Q8TAF3 CleanEx:HS_WDR48 Genevestigator:Q8TAF3
GermOnline:ENSG00000114742 Uniprot:Q8TAF3
Length = 677
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|F2Z5V5 [details] [associations]
symbol:WDR48 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016579 KO:K15361
InterPro:IPR021772 Pfam:PF11816 CTD:57599
GeneTree:ENSGT00520000055738 OMA:NRLYSAG EMBL:CU856480
RefSeq:XP_003132167.1 UniGene:Ssc.3296 ProteinModelPortal:F2Z5V5
SMR:F2Z5V5 PRIDE:F2Z5V5 Ensembl:ENSSSCT00000012329 GeneID:100518629
KEGG:ssc:100518629 Uniprot:F2Z5V5
Length = 677
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|Q5RAW8 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9601
"Pongo abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0016579
"protein deubiquitination" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
OrthoDB:EOG4HHP1W GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413
OMA:NRLYSAG EMBL:CR858893 RefSeq:NP_001125636.1 UniGene:Pab.18183
ProteinModelPortal:Q5RAW8 Ensembl:ENSPPYT00000016282
GeneID:100172554 KEGG:pon:100172554 InParanoid:Q5RAW8
Uniprot:Q5RAW8
Length = 677
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|Q5F3K4 [details] [associations]
symbol:WDR48 "WD repeat-containing protein 48" species:9031
"Gallus gallus" [GO:0005764 "lysosome" evidence=IEA] [GO:0016579
"protein deubiquitination" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005764 GO:GO:0016579
KO:K15361 InterPro:IPR021772 Pfam:PF11816 CTD:57599
HOGENOM:HOG000007343 OrthoDB:EOG4HHP1W EMBL:AJ851646
IPI:IPI00571490 RefSeq:NP_001026135.1 UniGene:Gga.3234
ProteinModelPortal:Q5F3K4 STRING:Q5F3K4 Ensembl:ENSGALT00000031283
GeneID:420427 KEGG:gga:420427 GeneTree:ENSGT00520000055738
HOVERGEN:HBG079413 InParanoid:Q5F3K4 OMA:NRLYSAG NextBio:20823337
Uniprot:Q5F3K4
Length = 678
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQMGTVIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLNRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 132 (51.5 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 49/200 (24%), Positives = 90/200 (45%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIWNASN---YKCL-ESVNKAHEXXXXXXXXXXX 194
H + + L V ++GLM+ S + D+S ++W + C+ + + AH
Sbjct: 385 HTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKE 444
Query: 195 XXXYTGSADGRIRVWE--RSVVDHNKER-----KSRHMLVTTLVKHRSTVNALALNGDGS 247
T S D I+VW S+ K ++ H +T H +N++A++ +
Sbjct: 445 SFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTER-GHDKDINSVAVSPNDK 503
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQ 305
L+ +G DR +W D ++ GH + C+ V +LA+ SAD T+++W
Sbjct: 504 LIATGSQDRLAKLWSCP-DCSLL--GVFTGHKRGIWCVQFSPVDQILATSSADGTLKLW- 559
Query: 306 RGKENCYRCMAFLEGHEKPV 325
G ++ + C+ EGH+ V
Sbjct: 560 -GLQD-FSCLKTFEGHDASV 577
Score = 73 (30.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 50 INVFDLISDY-SHVDTFSNDLSSSGSVKSITFH--ITKI--FTAHQDCKIRVWKITASR 103
I ++D+I Y +H N SSG V + FH I+++ F++ D KIR+W + +S+
Sbjct: 134 IKIWDMIKQYCTH-----NLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSK 187
>MGI|MGI:1914811 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1914811 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005764 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 UniGene:Mm.473239 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 HOVERGEN:HBG079413 OMA:NRLYSAG
EMBL:AK122511 EMBL:AK012599 EMBL:AK018396 EMBL:AK030041
EMBL:AK033631 EMBL:AK035273 EMBL:AK035864 EMBL:AK043970
EMBL:BC006679 EMBL:BC048155 EMBL:BC062967 IPI:IPI00336198
IPI:IPI00659186 IPI:IPI00677198 RefSeq:NP_080512.1
ProteinModelPortal:Q8BH57 SMR:Q8BH57 STRING:Q8BH57
PhosphoSite:Q8BH57 PaxDb:Q8BH57 PRIDE:Q8BH57
Ensembl:ENSMUST00000036561 GeneID:67561 KEGG:mmu:67561
UCSC:uc009sbm.1 UCSC:uc009sbn.1 UCSC:uc009sbo.1 InParanoid:Q8BH57
NextBio:324921 Bgee:Q8BH57 CleanEx:MM_WDR48 Genevestigator:Q8BH57
GermOnline:ENSMUSG00000032512 Uniprot:Q8BH57
Length = 676
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLHRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>RGD|1309702 [details] [associations]
symbol:Wdr48 "WD repeat domain 48" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0016579
"protein deubiquitination" evidence=IEA;ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1309702 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016579 KO:K15361 InterPro:IPR021772
Pfam:PF11816 CTD:57599 OrthoDB:EOG4HHP1W
GeneTree:ENSGT00520000055738 IPI:IPI00914740 RefSeq:NP_001129367.1
UniGene:Rn.8675 PRIDE:D3Z8C7 Ensembl:ENSRNOT00000024172
GeneID:363164 KEGG:rno:363164 UCSC:RGD:1309702 OMA:RYPKENT
NextBio:682684 Uniprot:D3Z8C7
Length = 676
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 48/205 (23%), Positives = 99/205 (48%)
Query: 129 TVRRHKKRLWL----EHWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAH 182
+V +HK+ ++ H D V+D+V+ G + S S D + K+WNA C+ ++
Sbjct: 58 SVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHK 117
Query: 183 EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
+ + D +I +W+ + + + + ++L ++ ++ +LA+
Sbjct: 118 DYVKALAYAKDKELVASAGLDRQIFLWDVNTLTA-LTASNNTVTTSSLSGNKDSIYSLAM 176
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRT 300
N G+++ SG ++ + VW+ +++ L GHT + L+ G SGS+D T
Sbjct: 177 NQLGTIIVSGSTEKVLRVWDPRTCAKLM---KLKGHTDNVKALLLHRDGTQCLSGSSDGT 233
Query: 301 VRIWQRGKENCYRCMAFLEGHEKPV 325
+R+W G++ RC+A H++ V
Sbjct: 234 IRLWSLGQQ---RCIATYRVHDEGV 255
Score = 116 (45.9 bits), Expect = 0.00094, P = 0.00094
Identities = 42/183 (22%), Positives = 78/183 (42%)
Query: 155 MYSVSWDRSFKIWNASNYK---CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
+++ D +IW+ + +K + S+ + + S+D ++VW
Sbjct: 45 LFTAGRDSIIRIWSVNQHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNA 104
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER------ 265
H + ++TL H+ V ALA D L+ S G DR I +W+
Sbjct: 105 ----H------KGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTA 154
Query: 266 DHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323
+ V +L G+ ++ L + +G ++ SGS ++ +R+W C + M L+GH
Sbjct: 155 SNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWD--PRTCAKLMK-LKGHTD 211
Query: 324 PVK 326
VK
Sbjct: 212 NVK 214
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 237 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFNN 294
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 295 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 344
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 345 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 398
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 399 CLRVLEGHEELVR 411
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ S +C + + H TGS+D +RVW D N
Sbjct: 223 DNTIKIWDKSTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 272
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 273 -TGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 329 AVN-VVDFDDKYIVSASGDRTIKVW 352
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 53/187 (28%), Positives = 79/187 (42%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ S+ + L ++ H T
Sbjct: 264 HTGSVLCLQYDERVIVTGSSDSTVRVWDVSSGEVLNTL--IHHNEAVLHLRFCNGLMVTC 321
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D + R LV HR+ VN + D + S DR I
Sbjct: 322 SKDRSIAVWDMASATDISLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 371
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 372 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 425
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 426 GHEELVR 432
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 42/145 (28%), Positives = 63/145 (43%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ + +CL+ V H TGS+D +RVW+ S
Sbjct: 244 DNSIKIWDKQSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVS-------- 293
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
S +L TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 294 -SGEVL-NTLIHHNEAV--LHLRFCNGLMVTCSKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 350 AVN-VVDFDDKYIVSASGDRTIKVW 373
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 156 (60.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 295 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFNN 352
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 353 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 402
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 403 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 456
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 457 CLRVLEGHEELVR 469
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 39/145 (26%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ + +C + + H TGS+D +RVW D N
Sbjct: 281 DNTIKIWDKNTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 330
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 331 -TGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 387 AVN-VVDFDDKYIVSASGDRTIKVW 410
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 300 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFNN 357
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 358 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 407
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 408 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 461
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 462 CLRVLEGHEELVR 474
Score = 118 (46.6 bits), Expect = 0.00045, P = 0.00045
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ S +C + + H TGS+D +RVW D N
Sbjct: 286 DNTIKIWDKSTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 335
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 336 -TGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 392 AVN-VVDFDDKYIVSASGDRTIKVW 415
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFNN 393
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 443
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 444 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 497
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 498 CLRVLEGHEELVR 510
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ S +C + + H TGS+D +RVW D N
Sbjct: 322 DNTIKIWDKSTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 371
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 372 -TGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 428 AVN-VVDFDDKYIVSASGDRTIKVW 451
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 156 (60.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL--IHHCEAVLHLRFNN 393
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 443
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 444 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 497
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 498 CLRVLEGHEELVR 510
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 154 (59.3 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 237 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTL--IHHCEAVLHLRFNN 294
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 295 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 344
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 345 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 398
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 399 CLRVLEGHEELVR 411
Score = 118 (46.6 bits), Expect = 0.00038, P = 0.00038
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ S +C + + H TGS+D +RVW D N
Sbjct: 223 DNTIKIWDKSTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 272
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 273 -AGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 329 AVN-VVDFDDKYIVSASGDRTIKVW 352
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 230 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 287
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 288 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 337
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 338 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 391
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 392 GHEELVR 398
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/145 (27%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ S+ +CL+ V H TGS+D +RVW+ + +
Sbjct: 210 DNSIKIWDKSSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 262
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 263 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 315
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 316 AVN-VVDFDDKYIVSASGDRTIKVW 339
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 247 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 304
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 305 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 354
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 355 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 408
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 409 GHEELVR 415
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 227 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 279
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 280 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 333 AVN-VVDFDDKYIVSASGDRTIKVW 356
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 247 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 304
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 305 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 354
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 355 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 408
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 409 GHEELVR 415
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 227 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 279
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 280 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 333 AVN-VVDFDDKYIVSASGDRTIKVW 356
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTL--IHHCEAVLHLRFNN 393
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 443
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 444 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 497
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 498 CLRVLEGHEELVR 510
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ S +C + + H TGS+D +RVW D N
Sbjct: 322 DNTIKIWDKSTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 371
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 372 -AGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 428 AVN-VVDFDDKYIVSASGDRTIKVW 451
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTL--IHHCEAVLHLRFNN 393
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 443
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 444 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 497
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 498 CLRVLEGHEELVR 510
Score = 118 (46.6 bits), Expect = 0.00049, P = 0.00049
Identities = 40/145 (27%), Positives = 62/145 (42%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D + KIW+ S +C + + H TGS+D +RVW D N
Sbjct: 322 DNTIKIWDKSTLEC-KRILTGH-TGSVLCLQYDERVIITGSSDSTVRVW-----DVN--- 371
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
+ ML TL+ H V L N ++ + DR I VW+ + L GH
Sbjct: 372 -AGEML-NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 428 AVN-VVDFDDKYIVSASGDRTIKVW 451
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 154 (59.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 54/193 (27%), Positives = 80/193 (41%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXX 194
KR+ H +V L + ++ + S D + ++W+ + + L ++ H
Sbjct: 336 KRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNAGEMLNTL--IHHCEAVLHLRFNN 393
Query: 195 XXXYTGSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
T S D I VW+ S D R LV HR+ VN + D + S
Sbjct: 394 GMMVTCSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSAS 443
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYR 313
DR I VW F L GH + CL L+ SGS+D T+R+W C
Sbjct: 444 GDRTIKVWNTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGA 497
Query: 314 CMAFLEGHEKPVK 326
C+ LEGHE+ V+
Sbjct: 498 CLRVLEGHEELVR 510
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 264 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 321
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 322 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 371
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 372 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 425
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 426 GHEELVR 432
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 40/145 (27%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ S+ +CL+ V H TGS+D +RVW+ + +
Sbjct: 244 DNSIKIWDKSSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 296
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 297 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 349
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 350 AVN-VVDFDDKYIVSASGDRTIKVW 373
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 266 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 323
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 324 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 373
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 374 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 427
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 428 GHEELVR 434
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 246 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 298
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 299 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 351
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 352 AVN-VVDFDDKYIVSASGDRTIKVW 375
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 153 (58.9 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 267 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 324
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 325 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 374
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 375 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 428
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 429 GHEELVR 435
Score = 126 (49.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 247 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 299
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 300 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 352
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 353 AVN-VVDFDDKYIVSASGDRTIKVW 376
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 336
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 337 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 386
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 387 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 440
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 441 GHEELVR 447
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 40/145 (27%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ S+ +CL+ V H TGS+D +RVW+ + +
Sbjct: 259 DNSIKIWDKSSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 311
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 312 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 365 AVN-VVDFDDKYIVSASGDRTIKVW 388
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 336
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 337 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 386
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 387 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 440
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 441 GHEELVR 447
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 259 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 311
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 312 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 365 AVN-VVDFDDKYIVSASGDRTIKVW 388
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 279 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 336
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 337 SKDRSIAVWDMASATDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 386
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 387 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 440
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 441 GHEELVR 447
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 259 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 311
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 312 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 365 AVN-VVDFDDKYIVSASGDRTIKVW 388
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 151 (58.2 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 52/187 (27%), Positives = 77/187 (41%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 252 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVTC 309
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 310 SKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 359
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 360 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 413
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 414 GHEELVR 420
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 39/145 (26%), Positives = 64/145 (44%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ ++ +CL+ V H TGS+D +RVW+ + +
Sbjct: 232 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE----- 284
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 285 -----VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 338 AVN-VVDFDDKYIVSASGDRTIKVW 361
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 151 (58.2 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 52/187 (27%), Positives = 79/187 (42%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L + ++ + S D + ++W+ ++ + L ++ H T
Sbjct: 264 HTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTL--IHHNEAVLHLRFCNGLMVTC 321
Query: 201 SADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S D I VW+ S D + R LV HR+ VN + D + S DR I
Sbjct: 322 SKDRSIAVWDMASPTDISLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTIK 371
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
VW F L GH + CL L+ SGS+D T+R+W C C+ LE
Sbjct: 372 VWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVLE 425
Query: 320 GHEKPVK 326
GHE+ V+
Sbjct: 426 GHEELVR 432
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 39/145 (26%), Positives = 63/145 (43%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D S KIW+ +CL+ + H TGS+D +RVW+ V+ +
Sbjct: 244 DNSIKIWDKQTLECLKILT-GH-TGSVLCLQYDERVIVTGSSDSTVRVWD---VNSGE-- 296
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 297 -----VLNTLIHHNEAV--LHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 281 ALLCLINVGD-LLASGSADRTVRIW 304
A+ +++ D + S S DRT+++W
Sbjct: 350 AVN-VVDFDDKYIVSASGDRTIKVW 373
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 149 (57.5 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 55/239 (23%), Positives = 100/239 (41%)
Query: 83 TKIFTAHQDCKIRVWKITAS------RQH--QLVS-TLPTVKDRLIRSVLPNNYVTVRR- 132
T + T D ++W I R H +++S + T DR+I + V
Sbjct: 190 TLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 133 --HKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
K + + H +S L+ + S D++ K+W+A+N KC+ ++ +
Sbjct: 250 TGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDS 309
Query: 189 XXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL 248
T SADG R++ + RK + L H ++ ++ N G+
Sbjct: 310 CFDYTGKLIATASADGTARIFSAAT------RKC----IAKLEGHEGEISKISFNPQGNH 359
Query: 249 LFSGGCDRWIVVWERERDHRMVFAEALWGHTGALL-CLINV-GDLLASGSADRTVRIWQ 305
L +G D+ +W+ + + + L GHT + C N G+++ +GS D T RIW+
Sbjct: 360 LLTGSSDKTARIWDAQTGQCL---QVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIWR 415
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/171 (26%), Positives = 75/171 (43%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ + S D + K+W+ N + + ++ TGS D + VW
Sbjct: 191 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW---- 246
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
D + RK V L+ H + +++ + N D SL+ +G D+ +W+ +
Sbjct: 247 -DADTGRK-----VNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVA--- 297
Query: 274 ALWGHTGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322
L GH +L C G L+A+ SAD T RI+ +C+A LEGHE
Sbjct: 298 TLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR---KCIAKLEGHE 345
Score = 131 (51.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 39/169 (23%), Positives = 72/169 (42%)
Query: 159 SWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNK 218
S+D++ K+W+ KC + TGS D ++W+ + + +
Sbjct: 154 SFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD---IQNGE 210
Query: 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH 278
E V TL H + + +L+ N G + +G D +VVW+ + ++ L GH
Sbjct: 211 E-------VYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKV---NILIGH 260
Query: 279 TGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ D L+ +GS D+T ++W +C+A L GH+ +
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNG---KCVATLTGHDDEI 306
>UNIPROTKB|I3LQS7 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:FP102591 Ensembl:ENSSSCT00000032341 Uniprot:I3LQS7
Length = 478
Score = 142 (55.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 47/181 (25%), Positives = 84/181 (46%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DAVS L ++G +YS S DRS K+WN + +E++ +
Sbjct: 243 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVT 302
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
G DG +RVW+ + + ++ LV H+ +++++ L + ++ SG D +
Sbjct: 303 AGGRDGTVRVWK--IPEESQ-------LV--FYGHQGSIDSIQLINEEHMV-SGADDGSV 350
Query: 259 VVWERERDHRMVF---AEALWGHTG--------ALLCLINVGDLLASGSADRTVRIWQRG 307
+W + + A L G G ++ L+N DL+A+GS + +VR+WQ G
Sbjct: 351 ALWGLSKKRPLALQREAHGLRGEQGLEQPFWVSSVAALLNT-DLIATGSHNNSVRLWQCG 409
Query: 308 K 308
+
Sbjct: 410 E 410
Score = 108 (43.1 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 156 YSVSWDRS--FKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
Y S DRS IW A + + L + + Y+ S D ++VW +V
Sbjct: 216 YLASGDRSKLILIWEAQSCRHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVW--NV 273
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNAL-ALNGDGSLLFSGGCDRWIVVWERERDHRMVFA 272
+++ V TL H+ V AL AL+ + + +GG D + VW+ + ++VF
Sbjct: 274 AENS--------YVETLFGHQDAVAALDALSRE-CCVTAGGRDGTVRVWKIPEESQLVF- 323
Query: 273 EALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKE 309
+GH G++ + LIN + + SG+ D +V +W K+
Sbjct: 324 ---YGHQGSIDSIQLINE-EHMVSGADDGSVALWGLSKK 358
Score = 48 (22.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 85 IFTAHQDCKIRVWKITASRQHQLV 108
IF+A +DC I W + + R+ ++
Sbjct: 164 IFSAAKDCTIIKWSVESGRKLHVI 187
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 135 (52.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 212 SVVDHNKERKSRHMLVTT-LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMV 270
SV D R H L +T KH+S V L + G+ +L SGG DR + VW+ +
Sbjct: 396 SVNDKTSTRYRNHNLSSTHTFKHQSCVTCLQVYGN--ILMSGGSDRVVRVWDLNTSQPI- 452
Query: 271 FAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ L GH + L G++L +GS D TVR+W +N ++ L GH V+
Sbjct: 453 --QILSGHNEGIRALQFNGNVLVTGSDDTTVRVWDLRSKNSN--ISTLRGHNGSVR 504
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
YTGS D +VW+ K +K R TL H + L +N + ++ +G D
Sbjct: 247 YTGSFDKTAKVWD------TKTKKCRF----TLAGHYYPIQCLDVNNN--IMATGSLDNS 294
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
I +W+ E+ H + CL +GD + SGS+D TV++W
Sbjct: 295 IRIWDLEKGKSKGILTTR-AHNFDVFCLQQIGDQIISGSSDSTVKVW 340
Score = 104 (41.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+G +D +RVW D N + + L H + AL NG+ +L +G D +
Sbjct: 434 SGGSDRVVRVW-----DLNTSQP-----IQILSGHNEGIRALQFNGN--VLVTGSDDTTV 481
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
VW+ + + L GH G++ CL G L +GS D++VR W
Sbjct: 482 RVWDLRSKNSNI--STLRGHNGSVRCLQWDGTTLITGSNDQSVRWW 525
Score = 102 (41.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 140 EHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYT 199
+H V+ L V ++ S DR ++W+ + + ++ ++ +E T
Sbjct: 417 KHQSCVTCLQVYGNILMSGGSDRVVRVWDLNTSQPIQILSGHNEGIRALQFNGNVLV--T 474
Query: 200 GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
GS D +RVW+ +S++ ++TL H +V L DG+ L +G D+ +
Sbjct: 475 GSDDTTVRVWDL---------RSKNSNISTLRGHNGSVRCL--QWDGTTLITGSNDQSVR 523
Query: 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRI 303
W D ++ L+ ++ CL +L G +D V+I
Sbjct: 524 WWNLNYDSDQ--SKELFSFNSSISCLQFTNSILMCGLSDSKVQI 565
Score = 58 (25.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 28 HHMIISCLAVHNSLLYAASL-NEINVFDL 55
H+ I CL V+N+++ SL N I ++DL
Sbjct: 272 HYYPIQCLDVNNNIMATGSLDNSIRIWDL 300
>UNIPROTKB|F1MRM3 [details] [associations]
symbol:RRP9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00550000075093
OMA:AAKDCTI EMBL:DAAA02054389 IPI:IPI00867384 UniGene:Bt.9939
ProteinModelPortal:F1MRM3 Ensembl:ENSBTAT00000000891 Uniprot:F1MRM3
Length = 475
Score = 141 (54.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/181 (25%), Positives = 84/181 (46%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DAVS L ++G +YS S DRS K+WN + +E++ +
Sbjct: 240 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVT 299
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
G DG +RVW+ + + ++ LV H+ +++++ L + ++ SG D +
Sbjct: 300 AGGRDGTVRVWK--IPEESQ-------LV--FYGHQGSIDSIQLINEEHMV-SGADDGSV 347
Query: 259 VVWERERDHRMVF---AEALWGHTG--------ALLCLINVGDLLASGSADRTVRIWQRG 307
+W + + A L G G ++ L+N DL+A+GS + +VR+WQ G
Sbjct: 348 ALWGLSKKRPLALQREAHGLRGEPGLEQPFWVSSVAALLNT-DLVATGSHNNSVRLWQCG 406
Query: 308 K 308
+
Sbjct: 407 E 407
Score = 107 (42.7 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 156 YSVSWDRS--FKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
Y S DRS IW A + + L + + Y+ S D ++VW +V
Sbjct: 213 YLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVW--NV 270
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNAL-ALNGDGSLLFSGGCDRWIVVWERERDHRMVFA 272
+++ V TL H+ V AL AL+ + + +GG D + VW+ + ++VF
Sbjct: 271 AENS--------YVETLFGHQDAVAALDALSRE-CCVTAGGRDGTVRVWKIPEESQLVF- 320
Query: 273 EALWGHTGAL--LCLINVGDLLASGSADRTVRIWQRGKE 309
+GH G++ + LIN + + SG+ D +V +W K+
Sbjct: 321 ---YGHQGSIDSIQLINE-EHMVSGADDGSVALWGLSKK 355
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 85 IFTAHQDCKIRVWKITASRQHQLV 108
IF+A +DC I W + + R+ ++
Sbjct: 161 IFSAAKDCTIIKWSVESGRKLHVI 184
>MGI|MGI:2384313 [details] [associations]
symbol:Rrp9 "RRP9, small subunit (SSU) processome component,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2384313 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 GO:GO:0030529
GO:GO:0006364 GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732
KO:K14793 CTD:9136 HOVERGEN:HBG079296 OMA:AAKDCTI OrthoDB:EOG4XKV6X
EMBL:AF368232 EMBL:AF368234 EMBL:AK076113 EMBL:BC014703
IPI:IPI00128256 RefSeq:NP_663595.1 UniGene:Mm.239997
ProteinModelPortal:Q91WM3 SMR:Q91WM3 STRING:Q91WM3
PhosphoSite:Q91WM3 PaxDb:Q91WM3 PRIDE:Q91WM3
Ensembl:ENSMUST00000047721 GeneID:27966 KEGG:mmu:27966
UCSC:uc009rkb.1 InParanoid:Q91WM3 NextBio:306456 Bgee:Q91WM3
Genevestigator:Q91WM3 GermOnline:ENSMUSG00000041506 Uniprot:Q91WM3
Length = 475
Score = 141 (54.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DAVS L ++G +YS S DRS K+WNA+ +E++ +
Sbjct: 240 HRDAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVT 299
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
G DG +RVW+ + + ++ LV H+ +++ + L + ++ SG D +
Sbjct: 300 AGGRDGTVRVWK--IPEESQ-------LV--FYGHQGSIDCIHLINEEHMV-SGADDGSV 347
Query: 259 VVWERERDHRMVF---AEALWGHTG--------ALLCLINVGDLLASGSADRTVRIWQRG 307
+W + + A L G G ++ L+N DL+A+GS + VR+WQ G
Sbjct: 348 ALWGLSKKRPLALQREAHGLHGEPGLEQPFWVSSVAALLNT-DLVATGSHNARVRLWQCG 406
Query: 308 K 308
+
Sbjct: 407 E 407
Score = 113 (44.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 47/174 (27%), Positives = 75/174 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRS--FKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H V + + Y S DRS IW A + + L + + Y
Sbjct: 198 HSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLY 257
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL-ALNGDGSLLFSGGCDRW 257
+ S D ++VW N S V TL H+ V AL AL+ + + +GG D
Sbjct: 258 STSHDRSVKVW-------NAAENS---YVETLFGHQDAVAALDALSRE-CCVTAGGRDGT 306
Query: 258 IVVWERERDHRMVFAEALWGHTGALLC--LINVGDLLASGSADRTVRIWQRGKE 309
+ VW+ + ++VF +GH G++ C LIN + + SG+ D +V +W K+
Sbjct: 307 VRVWKIPEESQLVF----YGHQGSIDCIHLINE-EHMVSGADDGSVALWGLSKK 355
Score = 47 (21.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 85 IFTAHQDCKIRVWKITASRQHQLV 108
IF+A +DC I W + R+ ++
Sbjct: 161 IFSAAKDCTIIKWSVETGRKLHVI 184
>RGD|1307881 [details] [associations]
symbol:Rrp9 "ribosomal RNA processing 9, small subunit (SSU)
processome component, homolog (yeast)" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307881 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH473954
GeneTree:ENSGT00550000075093 HOGENOM:HOG000188732 KO:K14793
CTD:9136 HOVERGEN:HBG079296 OrthoDB:EOG4XKV6X EMBL:BC158778
IPI:IPI00869600 RefSeq:NP_001102248.1 UniGene:Rn.11840
STRING:B0BND5 Ensembl:ENSRNOT00000017469 GeneID:363134
KEGG:rno:363134 NextBio:682561 Genevestigator:B0BND5 Uniprot:B0BND5
Length = 478
Score = 141 (54.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 48/181 (26%), Positives = 83/181 (45%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DAVS L ++G +YS S DRS K+WNA+ +E++ +
Sbjct: 243 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVT 302
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
G DG +RVW+ + + ++ LV H+ +++ + L + ++ SG D +
Sbjct: 303 AGGRDGTVRVWK--IPEESQ-------LV--FYGHQGSIDCIHLINEEHMV-SGADDGSV 350
Query: 259 VVWERERDHRMVF---AEALWGHTG--------ALLCLINVGDLLASGSADRTVRIWQRG 307
+W + + A L G G ++ L+N DL+A+GS + VR+WQ G
Sbjct: 351 ALWGLSKKRPLALQREAHGLHGEPGLEQPFWISSVAALLNT-DLVATGSHNACVRLWQCG 409
Query: 308 K 308
+
Sbjct: 410 E 410
Score = 112 (44.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 45/159 (28%), Positives = 71/159 (44%)
Query: 156 YSVSWDRS--FKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
Y S DRS IW A + + L + + Y+ S D ++VW
Sbjct: 216 YLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVW---- 271
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNAL-ALNGDGSLLFSGGCDRWIVVWERERDHRMVFA 272
N S V TL H+ V AL AL+ + + +GG D + VW+ + ++VF
Sbjct: 272 ---NAAENS---YVETLFGHQDAVAALDALSRE-CCVTAGGRDGTVRVWKIPEESQLVF- 323
Query: 273 EALWGHTGALLC--LINVGDLLASGSADRTVRIWQRGKE 309
+GH G++ C LIN + + SG+ D +V +W K+
Sbjct: 324 ---YGHQGSIDCIHLINE-EHMVSGADDGSVALWGLSKK 358
Score = 47 (21.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 85 IFTAHQDCKIRVWKITASRQHQLV 108
IF+A +DC I W + R+ ++
Sbjct: 164 IFSAAKDCTIIKWSVETGRKLHVI 187
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 128 (50.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 42/135 (31%), Positives = 61/135 (45%)
Query: 200 GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
GS DG VWE D V+ L H S V +++ N GSLL + G D+ +
Sbjct: 66 GSFDGNTCVWENFATDSES--------VSVLRGHESEVKSVSWNASGSLLATCGRDKSVW 117
Query: 260 VWE--RERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIW----QRGKENC 311
+WE E D L GH+ + ++ D+L S S D T++IW + G NC
Sbjct: 118 IWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNC 177
Query: 312 YRCMAFLE-GHEKPV 325
+ ++ L GH V
Sbjct: 178 VQTLSELNNGHSSTV 192
Score = 56 (24.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 133 HKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASN 171
H R+W W+ +D G++ S S D++ +IW S+
Sbjct: 19 HTDRVWNVAWNPAAD-----GVIASCSADKTVRIWEQSS 52
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 48/181 (26%), Positives = 78/181 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H V +V ++ S DR ++WN + + + + + H +G
Sbjct: 291 HVMGVWAMVPWDNILVSGGCDREVRVWNMATGESIYLL-RGHTSTVRCLKMSDKNTAISG 349
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
S D +R+W+ + R + LV H+++V LA++GD ++ SG D V
Sbjct: 350 SRDTTLRIWDL------RTGTCR----SVLVGHQASVRCLAVHGD--IVVSGSYDTTARV 397
Query: 261 WERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEG 320
W F AL GH + + G +A+GS D +VRIW N +C A L+G
Sbjct: 398 WSISEGR---FLRALSGHFSQIYAIAFDGRRIATGSLDTSVRIWD---PNTGQCHAILQG 451
Query: 321 H 321
H
Sbjct: 452 H 452
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D+ K WNA N +V + HE TGS D ++VW +D +
Sbjct: 234 DKIEKNWNA-NPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW---CIDKGE-- 287
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TLV H V ++ G + SG DR + VW D ++ L GHT
Sbjct: 288 -----VMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV-DGSLL--HTLQGHTS 339
Query: 281 ALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ C+ G +L +GS D T+R+W E+ R +A L GH V+
Sbjct: 340 TVRCMAMAGSILVTGSRDTTLRVWD--VESG-RHLATLHGHHAAVR 382
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 73/294 (24%), Positives = 119/294 (40%)
Query: 31 IISCLAVHNSLLYAASL-NEINVFDLISDYSHVDTFSNDLSSSGSV--KSITFHITKIFT 87
+I+C+ +H+ +L S N + V+ + D V + +G V I+ I +
Sbjct: 258 VITCMQIHDDVLVTGSDDNTLKVWCI--DKGEV--MYTLVGHTGGVWTSQISQCGRYIVS 313
Query: 88 AHQDCKIRVWK-ITASRQHQLVSTLPTVKDRLIR-SVLPNNY--VTVR-------RHKKR 136
D ++VW + S H L TV+ + S+L T+R RH
Sbjct: 314 GSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLAT 373
Query: 137 LWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXX 196
L H AV + + S +D + KIWNA +C+ ++ +
Sbjct: 374 LHGHH-AAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 197 XYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR 256
+GS D IRVW+ + R V L H S + + L G+ +L S D
Sbjct: 433 VCSGSLDTSIRVWDFT-------RPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADS 483
Query: 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVG-DLLASGSADRTVRIW--QRG 307
+ VW+ H L GH A+ L G +++A+ S D TV++W +RG
Sbjct: 484 HVRVWDI---HEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERG 534
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 40/185 (21%), Positives = 72/185 (38%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H V + + ++ + S D + ++W+ + + L +++ H +G
Sbjct: 337 HTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHH--AAVRCVQFDGTTVVSG 394
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
D +++W H + TL H + V +L + S++ SG D I V
Sbjct: 395 GYDFTVKIWNA----HTGR------CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRV 444
Query: 261 WERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEG 320
W+ R L GHT + G++L S +AD VR+W + C L G
Sbjct: 445 WDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVH---MLSG 501
Query: 321 HEKPV 325
H +
Sbjct: 502 HRSAI 506
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 49/166 (29%), Positives = 73/166 (43%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER 220
D+ K WNA N +V + HE TGS D ++VW +D +
Sbjct: 234 DKIEKNWNA-NPIMGSAVLRGHEDHVITCMQIHDDVLVTGSDDNTLKVW---CIDKGE-- 287
Query: 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG 280
++ TLV H V ++ G + SG DR + VW D ++ L GHT
Sbjct: 288 -----VMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV-DGSLL--HTLQGHTS 339
Query: 281 ALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ C+ G +L +GS D T+R+W E+ R +A L GH V+
Sbjct: 340 TVRCMAMAGSILVTGSRDTTLRVWD--VESG-RHLATLHGHHAAVR 382
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 73/294 (24%), Positives = 119/294 (40%)
Query: 31 IISCLAVHNSLLYAASL-NEINVFDLISDYSHVDTFSNDLSSSGSV--KSITFHITKIFT 87
+I+C+ +H+ +L S N + V+ + D V + +G V I+ I +
Sbjct: 258 VITCMQIHDDVLVTGSDDNTLKVWCI--DKGEV--MYTLVGHTGGVWTSQISQCGRYIVS 313
Query: 88 AHQDCKIRVWK-ITASRQHQLVSTLPTVKDRLIR-SVLPNNY--VTVR-------RHKKR 136
D ++VW + S H L TV+ + S+L T+R RH
Sbjct: 314 GSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLAT 373
Query: 137 LWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXX 196
L H AV + + S +D + KIWNA +C+ ++ +
Sbjct: 374 LHGHH-AAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSI 432
Query: 197 XYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR 256
+GS D IRVW+ + R V L H S + + L G+ +L S D
Sbjct: 433 VCSGSLDTSIRVWDFT-------RPEGQECVALLQGHTSLTSGMQLRGN--ILVSCNADS 483
Query: 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVG-DLLASGSADRTVRIW--QRG 307
+ VW+ H L GH A+ L G +++A+ S D TV++W +RG
Sbjct: 484 HVRVWDI---HEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERG 534
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 40/185 (21%), Positives = 72/185 (38%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H V + + ++ + S D + ++W+ + + L +++ H +G
Sbjct: 337 HTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHH--AAVRCVQFDGTTVVSG 394
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
D +++W H + TL H + V +L + S++ SG D I V
Sbjct: 395 GYDFTVKIWNA----HTGR------CIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRV 444
Query: 261 WERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEG 320
W+ R L GHT + G++L S +AD VR+W + C L G
Sbjct: 445 WDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVH---MLSG 501
Query: 321 HEKPV 325
H +
Sbjct: 502 HRSAI 506
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/159 (28%), Positives = 68/159 (42%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERS 212
L+ S S D S ++W+ + KCL V K H+ +G D R VWE
Sbjct: 82 LIASSSSDHSIRLWDVARSKCLH-VLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE-- 138
Query: 213 VVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFA 272
V + V LV H ++ + + L +G D + +W+ +V
Sbjct: 139 -VQSGRR-------VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY 190
Query: 273 EALWGHTGALLCLI-NVGDLLASGSADRTVRIWQRGKEN 310
L GHTG + CL + LLASGS D+T+ +W+ N
Sbjct: 191 HNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNN 229
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 232 KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVG 289
+H VN A + DG L + D + VW + R+++ A GH G + C G
Sbjct: 24 QHHGEVNCSAFSPDGRTLLTASDDGCVYVWGT-KSGRLLWRLA--GHRGPVKSCCFSPDG 80
Query: 290 DLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
L+AS S+D ++R+W + +C+ L+GH++ V+
Sbjct: 81 RLIASSSSDHSIRLWDVARS---KCLHVLKGHQRSVE 114
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 148 (57.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 43/147 (29%), Positives = 71/147 (48%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGS+D +R+W+ V++ N
Sbjct: 562 DRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWD--VLNGN-- 616
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++LA + +G L SG D +++W+ H ++ AE L GHT
Sbjct: 617 ------CVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDI--GHGLMIAE-LKGHT 667
Query: 280 GALLCL--INVGDLLASGSADRTVRIW 304
G + L G+++ASGS D TVR+W
Sbjct: 668 GTIYALKFSRDGEIIASGSIDNTVRLW 694
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 53/239 (22%), Positives = 101/239 (42%)
Query: 83 TKIFTAHQDCKIRVWKITASRQ------H--QLVS-TLPTVKDRLIRSVLPNNYVT---V 130
T + T D ++W I + + H +++S + T DR+I + V
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS 249
Query: 131 RRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
K + H +S + L+ + S D++ +W+A++ KC+ ++ +
Sbjct: 250 TGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDS 309
Query: 189 XXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL 248
T SADG RV+ + RK +T L H ++ ++ N G+
Sbjct: 310 CFDYTGKLIATASADGTARVYNATT------RKC----ITKLEGHEGEISKISFNPQGNR 359
Query: 249 LFSGGCDRWIVVWERERDHRMVFAEALWGHTGALL-CLINV-GDLLASGSADRTVRIWQ 305
L +G D+ +W+ + + + L GHT + C N G+++ +GS D + RIW+
Sbjct: 360 LLTGSSDKTARIWDVQTGQCL---QVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIWR 415
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 39/169 (23%), Positives = 71/169 (42%)
Query: 159 SWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNK 218
S+D++ K+W+A KC + TGS D ++W+ + +
Sbjct: 154 SFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD---IQSGE 210
Query: 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH 278
E V TL H + + +L+ + G + +G D +VVW+ ++ L GH
Sbjct: 211 E-------VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKV---HTLIGH 260
Query: 279 TGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ + D L+ +GS D+T +W +C+A L GH+ +
Sbjct: 261 CAEISSALFSWDCSLILTGSMDKTCMLWDATSG---KCVATLTGHDDEI 306
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 42/166 (25%), Positives = 72/166 (43%)
Query: 159 SWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNK 218
S D + K+W+ + + + ++ TGS D + VW+ S
Sbjct: 196 SMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAST----- 250
Query: 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH 278
RK V TL+ H + +++ + D SL+ +G D+ ++W+ + L GH
Sbjct: 251 GRK-----VHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVA---TLTGH 302
Query: 279 TGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322
+L C G L+A+ SAD T R++ +C+ LEGHE
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARVYNATTR---KCITKLEGHE 345
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 116 (45.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
TGS D +++W D +K ++ H +V + + LFS G DR +
Sbjct: 599 TGSQDKNLKIWGLDFGDCHK----------SIFAHGDSVMGVKFVRNTHYLFSIGKDRLV 648
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
W+ ++ ++ E GH + CL N GD L +GS DR++R W R +E
Sbjct: 649 KYWDADKFEHLLTLE---GHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEE 698
Score = 98 (39.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKH---RSTVNALALNGDGSLLFSGGCD 255
T SAD ++ WE V K K+ L + VK V A+A++ D + D
Sbjct: 504 TVSADHEVKFWEYQV--KQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLD 561
Query: 256 RWIVVWERERDHRMVFAEALWGHTGALLCL-INV-GDLLASGSADRTVRIWQRGKENCYR 313
+ V+ + + F +L+GH ++C+ I+ G+L+ +GS D+ ++IW +C++
Sbjct: 562 STVKVFYMDS---LKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHK 618
Query: 314 CMAFLEG 320
+ F G
Sbjct: 619 SI-FAHG 624
Score = 79 (32.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 20/71 (28%), Positives = 31/71 (43%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D V+DLV G + S S D+ ++W+ C++ V+ H
Sbjct: 147 HRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVV 206
Query: 199 TGSADGRIRVW 209
TGSAD +R +
Sbjct: 207 TGSADQELRFY 217
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 27/97 (27%), Positives = 42/97 (43%)
Query: 99 ITASRQHQLVSTLPTV-KDRL--IRSVLPNN---YVTVR--RHKKRLWLEHWDAVSD--- 147
I A R+ S PT K+ L + L NN + +++ + K + +EH SD
Sbjct: 352 IRAGRKISSFSFCPTAPKESLGTLALSLNNNSLEFYSLKSSENAKTVTIEHQGHRSDVRS 411
Query: 148 --LVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAH 182
L L+ S S KIWN S CL +++ +
Sbjct: 412 VTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTIDSGY 447
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 147 (56.8 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 42/176 (23%), Positives = 76/176 (43%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY--TGSADGRIRVWER 211
L+ + S D++ ++WNA++ C+ V H + +GS D ++VW
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCI-GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF 271
+ + E + + H +N++A+ + SL+ +G DR +W R D +V
Sbjct: 477 DGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIW-RLPD--LVH 533
Query: 272 AEALWGHTGALLCL--INVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
L GH + + V + + S D+TV+IW +C + EGH V
Sbjct: 534 VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTF---EGHTSSV 586
Score = 44 (20.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 16/63 (25%), Positives = 32/63 (50%)
Query: 41 LLYAASLNEINVFDLIS-DYSHVDTFSNDLSSS-GSVKSITFHITKIFTAHQDCKIRVWK 98
L A +L E+ V+D+ + S+V ++ S + S + ++ I T +D +R+W
Sbjct: 374 LAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVL-IVTGSKDKTVRLWN 432
Query: 99 ITA 101
T+
Sbjct: 433 ATS 435
Score = 38 (18.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 40 SLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKI 99
S + A + IN+ D +D S T + S + + +++ +F+A +IRVW +
Sbjct: 32 SFIACACGDVINIVDS-TDSSVKSTIEGE-SDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 144 (55.7 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 50/186 (26%), Positives = 76/186 (40%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H +V L ++ S S D + ++W+ + + + ++ H T
Sbjct: 249 HTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTL--IHHCEAVLHLRFNNGMMVTC 306
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
S D I VW+ + S L LV HR+ VN + D + S DR I V
Sbjct: 307 SKDRSIAVWDMT-------SPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKV 357
Query: 261 WERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEG 320
W F L GH + CL L+ SGS+D ++R+W C C+ LEG
Sbjct: 358 WSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDI---ECGACLRVLEG 411
Query: 321 HEKPVK 326
HE+ V+
Sbjct: 412 HEELVR 417
Score = 134 (52.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 51/209 (24%), Positives = 88/209 (42%)
Query: 123 LPNNYVTVRRHKKRLWL--EHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNK 180
+ NN+ T R +R+ E+ V L G + S D + KIW+ ++ +C++++
Sbjct: 189 IENNWRTGRHMLRRINCRSENSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTL-M 247
Query: 181 AHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL 240
H +GS+D +RVW+ + + +V TL+ H V L
Sbjct: 248 GH-TGSVLCLQYDDKVIISGSSDSTVRVWDVNTGE----------MVNTLIHHCEAVLHL 296
Query: 241 ALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDL----LASGS 296
N ++ + DR I VW+ + L GH A +NV D + S S
Sbjct: 297 RFNN--GMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAA----VNVVDFDEKYIVSAS 350
Query: 297 ADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
DRT+++W C + L GH++ +
Sbjct: 351 GDRTIKVWSTS--TC-EFVRTLNGHKRGI 376
>UNIPROTKB|O43818 [details] [associations]
symbol:RRP9 "U3 small nucleolar RNA-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=TAS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003723 GO:GO:0006364 GO:GO:0030532
GO:GO:0005732 HOGENOM:HOG000188732 KO:K14793 EMBL:AJ001340
EMBL:AK313696 EMBL:BC001113 EMBL:BC009879 EMBL:BC010048
EMBL:BC023662 IPI:IPI00217862 RefSeq:NP_004695.1 UniGene:Hs.153768
ProteinModelPortal:O43818 SMR:O43818 IntAct:O43818 STRING:O43818
PhosphoSite:O43818 DOSAC-COBS-2DPAGE:O43818 SWISS-2DPAGE:O43818
PaxDb:O43818 PeptideAtlas:O43818 PRIDE:O43818 DNASU:9136
Ensembl:ENST00000232888 GeneID:9136 KEGG:hsa:9136 UCSC:uc003dbw.1
CTD:9136 GeneCards:GC03M051943 HGNC:HGNC:16829 HPA:HPA038798
neXtProt:NX_O43818 PharmGKB:PA162402176 HOVERGEN:HBG079296
InParanoid:O43818 OMA:AAKDCTI OrthoDB:EOG4XKV6X PhylomeDB:O43818
GenomeRNAi:9136 NextBio:34259 Bgee:O43818 CleanEx:HS_RRP9
Genevestigator:O43818 GermOnline:ENSG00000114767 Uniprot:O43818
Length = 475
Score = 135 (52.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 47/181 (25%), Positives = 81/181 (44%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DAVS L ++G +YS S DRS K+WN + +E++ +
Sbjct: 240 HRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVT 299
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
G DG +RVW+ + + ++ LV H+ +++ + L + ++ SG D +
Sbjct: 300 AGGRDGTVRVWK--IPEESQ-------LV--FYGHQGSIDCIHLINEEHMV-SGADDGSV 347
Query: 259 VVWERERDHRMVF---AEALWGHTG--------ALLCLINVGDLLASGSADRTVRIWQRG 307
+W + + A L G G ++ L+N DL+A+GS VR+WQ G
Sbjct: 348 ALWGLSKKRPLALQREAHGLRGEPGLEQPFWISSVAALLNT-DLVATGSHSSCVRLWQCG 406
Query: 308 K 308
+
Sbjct: 407 E 407
Score = 114 (45.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/174 (26%), Positives = 78/174 (44%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRS--FKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H V + + Y S DRS IW A + + L + + Y
Sbjct: 198 HSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLY 257
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL-ALNGDGSLLFSGGCDRW 257
+ S D ++VW +V +++ V TL H+ V AL AL+ + + +GG D
Sbjct: 258 STSHDRSVKVW--NVAENS--------YVETLFGHQDAVAALDALSRE-CCVTAGGRDGT 306
Query: 258 IVVWERERDHRMVFAEALWGHTGALLC--LINVGDLLASGSADRTVRIWQRGKE 309
+ VW+ + ++VF +GH G++ C LIN + + SG+ D +V +W K+
Sbjct: 307 VRVWKIPEESQLVF----YGHQGSIDCIHLINE-EHMVSGADDGSVALWGLSKK 355
Score = 49 (22.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 85 IFTAHQDCKIRVWKITASRQHQLV 108
IF+A +DC I W + + R+ ++
Sbjct: 161 IFSAAKDCSIIKWSVESGRKLHVI 184
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 116 (45.9 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 45/194 (23%), Positives = 81/194 (41%)
Query: 141 HWDAVSDL-VVKQGLMYSV-SWDRSFKIW----NASNYKCL-ESVNKAHEXXXXXXXXXX 193
H D + + V ++G M++ + D+S ++W ++ C+ + ++
Sbjct: 385 HTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMK 444
Query: 194 XXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
+GS D ++VW+ E +T H VN++ ++ + LL SG
Sbjct: 445 QQFVVSGSQDCTVKVWDLPETT-GAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGS 503
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQRGKENC 311
DR +W D R++ GH + + V +L S SAD +VRIW
Sbjct: 504 QDRTAKLWALS-DLRLL--GVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQD--- 557
Query: 312 YRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 558 FSCLKTFEGHDASV 571
Score = 100 (40.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 40/156 (25%), Positives = 68/156 (43%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERS 212
L+ S S DR+ K+W S+ + L V + H + SADG +R+W S
Sbjct: 498 LLASGSQDRTAKLWALSDLRLL-GVCRGHRRGVWSVQFSPVDQILGSASADGSVRIW--S 554
Query: 213 VVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDH--RMV 270
+ D + + T H ++V + G+ L S G D + +W + + R +
Sbjct: 555 IQDFS--------CLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTL 606
Query: 271 FA--EALWGHTGALLCLINVGDLLASGSADRTVRIW 304
A + +W G C +L+ +GSAD T+ +W
Sbjct: 607 DAHQDKVWALHGG--CR---DELMVTGSADSTITVW 637
Score = 87 (35.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 32/132 (24%), Positives = 55/132 (41%)
Query: 131 RRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXX 190
R H++ +W + V ++ G S S D S +IW+ ++ CL++ + H+
Sbjct: 523 RGHRRGVWSVQFSPVDQIL---G---SASADGSVRIWSIQDFSCLKTF-EGHDASVLKII 575
Query: 191 XXXXXXXYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLL 249
S +DG +++W + N+ V TL H+ V AL L+
Sbjct: 576 FVSRGTQLVSSGSDGLVKLW---TIKTNE-------CVRTLDAHQDKVWALHGGCRDELM 625
Query: 250 FSGGCDRWIVVW 261
+G D I VW
Sbjct: 626 VTGSADSTITVW 637
Score = 77 (32.2 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 50 INVFDLISDY-SHVDTFSNDLSSSGSVKSITFH--ITKI--FTAHQDCKIRVWKITASR 103
I ++D+I Y +H N SSG V + FH I+++ F++ DC IR+W + +SR
Sbjct: 130 IKLWDVIKQYCTH-----NLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSR 183
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/196 (26%), Positives = 84/196 (42%)
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNAS--NYKCLESVNKAHEXXXXXXXXXX 193
R W W+ L+ G DR +IW ++ C +++ H+
Sbjct: 18 RCWFLAWNPAGTLLASCG------GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP 71
Query: 194 XXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251
Y SA D +W+++ D VTTL H + V ++A G+LL +
Sbjct: 72 CGN-YLASASFDATTCIWKKNQDDFE--------CVTTLEGHENEVKSVAWAPSGNLLAT 122
Query: 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
D+ + VWE + + L HT + ++ +LLAS S D TV+++ R +E
Sbjct: 123 CSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY-REEE 181
Query: 310 NCYRCMAFLEGHEKPV 325
+ + C A LEGHE V
Sbjct: 182 DDWVCCATLEGHESTV 197
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 48/166 (28%), Positives = 68/166 (40%)
Query: 157 SVSWDRSFKIW--NASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSV 213
S S+D + IW N +++C+ ++ + HE T S D + VWE
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWE--- 133
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
VD E + V+ L H V + + LL S D + ++ E D V
Sbjct: 134 VDEEDE----YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD-WVCCA 188
Query: 274 ALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR---GKENCYRC 314
L GH + L G LAS S DRTVRIW++ G E C
Sbjct: 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGD 290
H+ TV +A + G+ L S D +W++ +D L GH + + G+
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPSGN 118
Query: 291 LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LLA+ S D++V +W+ +E+ Y C++ L H + VK
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWN--ASNYKCLESVNKAHEXXXXXXXXXX 193
R W W+ L+ G DRS +IW ++ C + + H+
Sbjct: 18 RCWFLAWNPAGTLLASCG------GDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSP 71
Query: 194 XXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251
Y SA D +W+++ D VTTL H + V ++A G+LL +
Sbjct: 72 CGN-YLASASFDATTCIWKKNEDDFE--------CVTTLEGHENEVKSVAWAPSGNLLAT 122
Query: 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
D+ + VWE + + L HT + ++ +LLAS S D TV+++ R +E
Sbjct: 123 CSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLY-REEE 181
Query: 310 NCYRCMAFLEGHEKPV 325
+ + C A LEGHE V
Sbjct: 182 DDWVCCATLEGHESTV 197
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 48/166 (28%), Positives = 68/166 (40%)
Query: 157 SVSWDRSFKIW--NASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSV 213
S S+D + IW N +++C+ ++ + HE T S D + VWE
Sbjct: 78 SASFDATTCIWKKNEDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWE--- 133
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
VD E + V+ L H V + + LL S D + ++ E D V
Sbjct: 134 VDEEDE----YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD-WVCCA 188
Query: 274 ALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR---GKENCYRC 314
L GH + L G LAS S DRTVRIW++ G E C
Sbjct: 189 TLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
Score = 113 (44.8 bits), Expect = 0.00071, P = 0.00071
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGD 290
H+ TV +A + G+ L S D +W++ D L GH + + G+
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDD-FECVTTLEGHENEVKSVAWAPSGN 118
Query: 291 LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LLA+ S D++V +W+ +E+ Y C++ L H + VK
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 143 (55.4 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 59/249 (23%), Positives = 107/249 (42%)
Query: 75 VKSITFHITKIF--TAHQDCKIRVWKITASRQHQLVS-------TLPTVKD-RLIRSVLP 124
V+S+ F + T +D +IR+W I R ++L++ +L KD + + S
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSG 408
Query: 125 NNYVT---VRRHKKRLWLEHWDAVSDLVVK-QGLMYSV-SWDRSFKIWNASNYKCLESVN 179
+ V V +++L L D V+ ++ G + S D+ +IW +S +E ++
Sbjct: 409 DRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSG-TLVEQLH 467
Query: 180 KAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKER--KSRHMLVTTLVKHRSTV 237
E +GS D I++WE V + K + T H+ +
Sbjct: 468 GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFI 527
Query: 238 NALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL-INV-GDLLASG 295
++ ++ DG + SG DR I W + H + L GH +++ + ++ G A+G
Sbjct: 528 LSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQL---TLQGHNNSVISVAVSPNGHCFATG 584
Query: 296 SADRTVRIW 304
S D RIW
Sbjct: 585 SGDLRARIW 593
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 142 (55.0 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 52/188 (27%), Positives = 77/188 (40%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSF-KIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYT 199
H +V L + ++ + S D + ++W+ + + L ++ H T
Sbjct: 259 HTGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGEVLNTL--IHHNEAVLHLRFSNGLMVT 316
Query: 200 GSADGRIRVWER-SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
S D I VW+ S D R LV HR+ VN + D + S DR I
Sbjct: 317 CSKDRSIAVWDMASPTDITLRR--------VLVGHRAAVNVVDF--DDKYIVSASGDRTI 366
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFL 318
VW F L GH + CL L+ SGS+D T+R+W C C+ L
Sbjct: 367 KVWSTSTCE---FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI---ECGACLRVL 420
Query: 319 EGHEKPVK 326
EGHE+ V+
Sbjct: 421 EGHEELVR 428
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 43/167 (25%), Positives = 72/167 (43%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRI-RVWERSVVDHNKE 219
D S KIW+ ++ +CL+ V H TGS+D + RVW+ + +
Sbjct: 239 DNSIKIWDKTSLECLK-VLTGH-TGSVLCLQYDERVIVTGSSDSTVSRVWDVNTGE---- 292
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
++ TL+ H V L L L+ + DR I VW+ + L GH
Sbjct: 293 ------VLNTLIHHNEAV--LHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 344
Query: 280 GALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
A+ +++ D + S S DRT+++W C + L GH++ +
Sbjct: 345 AAVN-VVDFDDKYIVSASGDRTIKVWSTS--TC-EFVRTLNGHKRGI 387
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 138 (53.6 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 49/179 (27%), Positives = 80/179 (44%)
Query: 154 LMYSVSWDRSFKIW--NASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSA--DGRIRVW 209
L+ S DR+ +IW + N+ C + + H+ Y SA D +W
Sbjct: 30 LLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGN-YLASASFDATTCIW 88
Query: 210 ERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM 269
+ +K +TTL H + V ++A GSLL + D+ + VWE + +
Sbjct: 89 MK--------KKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEY 140
Query: 270 VFAEALWGHTGALLCLI---NVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
L HT + ++ N +LLAS S D +V+++ R +E+ + C A LEGH V
Sbjct: 141 ECVSVLNSHTQDVKHVVWHPNQ-ELLASASYDDSVKLY-REEEDDWVCCATLEGHTSTV 197
Score = 128 (50.1 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/89 (39%), Positives = 47/89 (52%)
Query: 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH--TGALLCLINVGDLLASGSA 297
LA N G+LL S G DR I +W ++ D+ + + GH T + G+ LAS S
Sbjct: 22 LAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASF 81
Query: 298 DRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T IW + KE + C+ LEGHE VK
Sbjct: 82 DATTCIWMKKKEE-FECITTLEGHENEVK 109
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 49/183 (26%), Positives = 79/183 (43%)
Query: 157 SVSWDRSFKIW--NASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSV 213
S S+D + IW ++C+ ++ + HE T S D + VWE
Sbjct: 78 SASFDATTCIWMKKKEEFECITTL-EGHENEVKSVAWAPSGSLLATCSRDKSVWVWE--- 133
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
VD +E + V+ L H V + + + LL S D + ++ E D V
Sbjct: 134 VDEEEE----YECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDD-WVCCA 188
Query: 274 ALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR---GKENC-----YRCMAFLEG-HE 322
L GHT + L G+ LA+ S D+TVRIW++ G++ ++C+ L G H
Sbjct: 189 TLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHT 248
Query: 323 KPV 325
+ V
Sbjct: 249 RTV 251
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 136 RLWLEH--WDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXX 193
R+ L H W D+ + + S DR KIW+ ++ K ++
Sbjct: 280 RVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKK 339
Query: 194 XXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
++ D R++ W+ +++NK + H H S V L+L+ LL SGG
Sbjct: 340 NPYLFSCGEDNRVKCWD---LEYNKVIRDYH-------GHLSGVYCLSLHPSLDLLMSGG 389
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALL--CLINVGDLLASGSADRTVRIWQRGKENC 311
D + VW+ R VF L GHTG ++ C +V + SGS D+ +R+W N
Sbjct: 390 RDAVVRVWDI-RTKSSVFV--LSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDL---NN 443
Query: 312 YRCMAFLEGHEKPVK 326
+C L H+K ++
Sbjct: 444 GKCRISLTHHKKSIR 458
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 52/195 (26%), Positives = 85/195 (43%)
Query: 136 RLWLEH--WDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXX 193
R+ L H W D+ + + S DR KIW+ ++ K ++
Sbjct: 280 RVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIKISKK 339
Query: 194 XXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253
++ D R++ W+ +++NK + H H S V L+L+ LL SGG
Sbjct: 340 NPYLFSCGEDNRVKCWD---LEYNKVIRDYH-------GHLSGVYCLSLHPSLDLLMSGG 389
Query: 254 CDRWIVVWERERDHRMVFAEALWGHTGALL--CLINVGDLLASGSADRTVRIWQRGKENC 311
D + VW+ R VF L GHTG ++ C +V + SGS D+ +R+W N
Sbjct: 390 RDAVVRVWDI-RTKSSVFV--LSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDL---NN 443
Query: 312 YRCMAFLEGHEKPVK 326
+C L H+K ++
Sbjct: 444 GKCRISLTHHKKSIR 458
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/196 (26%), Positives = 83/196 (42%)
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNAS--NYKCLESVNKAHEXXXXXXXXXX 193
R W W+ L+ G DR +IW ++ C +++ H+
Sbjct: 18 RCWFLAWNPTGTLLASCG------GDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP 71
Query: 194 XXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251
Y SA D +W+++ D VTTL H + V ++A G+LL +
Sbjct: 72 CGN-YLASASFDATTCIWKKNQDDFE--------CVTTLEGHENEVKSVAWAPSGNLLAT 122
Query: 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
D+ + VWE + + L HT + ++ +LLAS S D TV+++Q +
Sbjct: 123 CSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGD 182
Query: 310 NCYRCMAFLEGHEKPV 325
+ + C A LEGHE V
Sbjct: 183 D-WVCCATLEGHESTV 197
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGD 290
H+ TV +A + G+ L S D +W++ +D L GH + + G+
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPSGN 118
Query: 291 LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LLA+ S D++V +W+ +E+ Y C++ L H + VK
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVK 154
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 47/166 (28%), Positives = 69/166 (41%)
Query: 157 SVSWDRSFKIW--NASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSV 213
S S+D + IW N +++C+ ++ + HE T S D + VWE
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWE--- 133
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
VD E + V+ L H V + + LL S D + +++ E D V
Sbjct: 134 VDEEDE----YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVCCA 188
Query: 274 ALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR---GKENCYRC 314
L GH + + G LAS S DRTVRIW++ G E C
Sbjct: 189 TLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/178 (26%), Positives = 79/178 (44%)
Query: 154 LMYSVSWDRSFKIWNAS--NYKCLESVNKAHEXXXXXXXXXXXXXXYTGSA--DGRIRVW 209
L+ S DR +IW ++ C +++ H+ Y SA D +W
Sbjct: 30 LLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCIW 88
Query: 210 ERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM 269
+++ D VTTL H + V ++A G+LL + D+ + VWE + +
Sbjct: 89 KKNQDDFE--------CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140
Query: 270 VFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
L HT + ++ +LLAS S D TV+++Q ++ + C A LEGHE V
Sbjct: 141 ECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVCCATLEGHESTV 197
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 34/89 (38%), Positives = 47/89 (52%)
Query: 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH--TGALLCLINVGDLLASGSA 297
LA N G+LL S G DR I +W E D + + GH T + G+ LAS S
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 298 DRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T IW++ +++ + C+ LEGHE VK
Sbjct: 82 DATTCIWKKNQDD-FECVTTLEGHENEVK 109
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 47/166 (28%), Positives = 69/166 (41%)
Query: 157 SVSWDRSFKIW--NASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSV 213
S S+D + IW N +++C+ ++ + HE T S D + VWE
Sbjct: 78 SASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVWE--- 133
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
VD E + V+ L H V + + LL S D + +++ E D V
Sbjct: 134 VDEEDE----YECVSVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD-WVCCA 188
Query: 274 ALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR---GKENCYRC 314
L GH + + G LAS S DRTVRIW++ G E C
Sbjct: 189 TLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234
Score = 114 (45.2 bits), Expect = 0.00055, P = 0.00055
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGD 290
H+ TV +A + G+ L S D +W++ +D L GH + + G+
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-FECVTTLEGHENEVKSVAWAPSGN 118
Query: 291 LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LLA+ S D++V +W+ +E+ Y C++ L H + VK
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVK 154
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 136 (52.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
T + D I++W +K+ + LV +L H TV +A + G L D
Sbjct: 41 TCANDKYIQIW-------SKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAGASFDAST 93
Query: 259 VVWERERDH-RMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCM 315
+WE+ +D +L GHT + + + G LLA+ S D+++ IWQ +N + C+
Sbjct: 94 SIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECL 153
Query: 316 AFLEGHEKPVK 326
+ GH + +K
Sbjct: 154 SINSGHGQDIK 164
Score = 127 (49.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 45/172 (26%), Positives = 80/172 (46%)
Query: 161 DRSFKIWNA-SNYK--CLESVNKAHEXXXXXXXXXXXXXXYTGSA-DGRIRVWERSVVDH 216
D+ +IW+ +N K ++S+ + HE G++ D +WE+S
Sbjct: 45 DKYIQIWSKDTNGKWGLVQSL-EGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKS---- 99
Query: 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW 276
E + H V++L H V ++A + G+LL + D+ I +W+ E D+
Sbjct: 100 KDELEFTH--VSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDNDFECLSINS 157
Query: 277 GHTGALLCLI---NVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
GH + C++ N +LLAS S D T++ W + + + C+ L GHE +
Sbjct: 158 GHGQDIKCVLWHPNE-ELLASSSYDDTIKFW-KDIDGDWECINTLTGHESSI 207
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 135 (52.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 50/199 (25%), Positives = 89/199 (44%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIWN---ASNYKCL-ESVNKAHEXXXXXXXXXXX 194
H D V L V ++G ++ S + D+S +IW A C+ + H
Sbjct: 375 HTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKAGQVMCVAQGSGHTHSVGTVCCSRLKE 434
Query: 195 XXXYTGSADGRIRVWE--RSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLL 249
TGS D +++W ++++ N + +L+ TT H +N++A+ + LL
Sbjct: 435 SFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLL 494
Query: 250 FSGGCDRWIVVWERERDHRM-VFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQR 306
+G DR +W + + VF+ GH L C+ + +LA+ SAD T+++W
Sbjct: 495 ATGSQDRTAKLWALPQCQLLGVFS----GHRRGLWCVQFSPMDQVLATASADGTIKLWAL 550
Query: 307 GKENCYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 551 QD---FSCLKTFEGHDASV 566
Score = 49 (22.3 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHI--TKI--FTAHQDCKIRVWKI 99
+ V+D++ Y F S G V + FH T++ F++ D IRVW +
Sbjct: 133 VRVWDIVRHYG-THHFRG---SPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSL 182
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 30 MIISCLAVHNSLLYAA 45
++++ A HN LLY A
Sbjct: 306 VVLTATADHNLLLYEA 321
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 132 (51.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 44/169 (26%), Positives = 73/169 (43%)
Query: 141 HWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H+D+++ L + + S D KIW+ + CL + + +
Sbjct: 338 HFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLF 397
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW- 257
+ S DG IR W D + R + T+ V+ N LA++ G ++ G D +
Sbjct: 398 SSSLDGTIRAW-----DLIRFRNFKTFTATSRVQF----NCLAVDPSGEVIVGGSQDTFE 448
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIW 304
I VW + + ++L GH G + CL +LAS S D+T+RIW
Sbjct: 449 IYVWSVQTGQLL---DSLTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 53 (23.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 28 HHMIISCLAVHNSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFH-ITKIF 86
H + C+A++N S++E L++ S V + S V I F K F
Sbjct: 54 HRKNVQCIALNNQNTLMISIDEDGRAILVNFVSRVVLHHFNFKSK--VNDIKFSPCGKYF 111
Query: 87 TAHQDCKIRVWK---ITASRQ 104
D I+VWK +T RQ
Sbjct: 112 AIAIDRFIQVWKTPDLTEDRQ 132
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 132 (51.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 44/169 (26%), Positives = 73/169 (43%)
Query: 141 HWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H+D+++ L + + S D KIW+ + CL + + +
Sbjct: 338 HFDSMNTLCYSPDGSRLVTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQVQFAKRGQVLF 397
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW- 257
+ S DG IR W D + R + T+ V+ N LA++ G ++ G D +
Sbjct: 398 SSSLDGTIRAW-----DLIRFRNFKTFTATSRVQF----NCLAVDPSGEVIVGGSQDTFE 448
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIW 304
I VW + + ++L GH G + CL +LAS S D+T+RIW
Sbjct: 449 IYVWSVQTGQLL---DSLTGHEGPISCLTFGKENSILASASWDKTIRIW 494
Score = 53 (23.7 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 28 HHMIISCLAVHNSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFH-ITKIF 86
H + C+A++N S++E L++ S V + S V I F K F
Sbjct: 54 HRKNVQCIALNNQNTLMISIDEDGRAILVNFVSRVVLHHFNFKSK--VNDIKFSPCGKYF 111
Query: 87 TAHQDCKIRVWK---ITASRQ 104
D I+VWK +T RQ
Sbjct: 112 AIAIDRFIQVWKTPDLTEDRQ 132
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 135 (52.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 43/169 (25%), Positives = 74/169 (43%)
Query: 159 SWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNK 218
S+D++ K+W+A KC + TGS D ++W+ V+ +
Sbjct: 154 SFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD---VESGE 210
Query: 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH 278
E V+TL H + + +L N G L +G D ++W+ ++ L GH
Sbjct: 211 E-------VSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKV---HVLSGH 260
Query: 279 TGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G + C+ D L+A+ S D++ ++W E +C+A L GH V
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCKVWDA--EGG-QCLATLLGHNDEV 306
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 38/153 (24%), Positives = 64/153 (41%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ + S D+S K+W+A +CL ++ ++ T SADG RV+
Sbjct: 275 LIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDT 334
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
+ L H+ ++ + N GS + + D+ VW + + +
Sbjct: 335 FQ----------CLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACL---Q 381
Query: 274 ALWGHTGALL-CLINV-GDLLASGSADRTVRIW 304
L GH+ + C N GD + +GS D T RIW
Sbjct: 382 VLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 43/171 (25%), Positives = 72/171 (42%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ + S D + K+W+ + + + ++ TGS D +W
Sbjct: 191 LVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW---- 246
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
D RK V L HR ++ + N D SL+ + D+ VW+ E +
Sbjct: 247 -DVPSGRK-----VHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLA--- 297
Query: 274 ALWGHTGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322
L GH +L C G L+A+ SAD T R++ + ++C+ LEGH+
Sbjct: 298 TLLGHNDEVLDVCFNYTGQLIATASADGTSRVFST---DTFQCLCQLEGHK 345
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ S DR+ ++W+ S+++C+ + AD I++W+
Sbjct: 158 LIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD--- 214
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
+ NK L+ H + VN + + G+ L SG D I + + + R+++
Sbjct: 215 IRTNK-------LIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDL-LEGRLIYT- 265
Query: 274 ALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENC-YRCMAFLEGHEKPV 325
L GH G +L + GDL ASG AD V +W+ ++ YR L H K V
Sbjct: 266 -LHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNFDSLNYR--ELLSKHSKRV 317
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH--TGALLCLINVGDLLASGSA 297
LA N G+LL S G DR + +W RE D + + GH T + G+ LAS S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 298 DRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T IW++ K++ + C+ LEGHE VK
Sbjct: 82 DATTCIWKKNKDD-FECVTTLEGHENEVK 109
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 51/196 (26%), Positives = 83/196 (42%)
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWN--ASNYKCLESVNKAHEXXXXXXXXXX 193
R W W+ L+ G DRS +IW ++ C + + H+
Sbjct: 18 RCWFLAWNPAGTLLASCG------GDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSP 71
Query: 194 XXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251
Y SA D +W K+ K VTTL H + V ++A G+LL +
Sbjct: 72 CGN-YLASASFDATTCIW--------KKNKDDFECVTTLEGHENEVKSVAWAPSGNLLAT 122
Query: 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
D+ + VWE +++ + ++ ++ +LLAS S D TV+++ R +E
Sbjct: 123 CSRDKSVWVWEGTVENQPSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLY-REEE 181
Query: 310 NCYRCMAFLEGHEKPV 325
+ + C A LEGHE V
Sbjct: 182 DDWVCCATLEGHESTV 197
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 39/104 (37%), Positives = 49/104 (47%)
Query: 226 LVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW-GHTGAL-- 282
L+ TL H V + A + G L S G D+ I VW + R V L GHT +
Sbjct: 6 LLQTLTGHAGRVWSAAWHPGGKLFASCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRE 65
Query: 283 LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
L G LAS S D TV +W + K + C A LEGH+ VK
Sbjct: 66 LAWSCCGHYLASASFDTTVAVWDK-KSGEFECNATLEGHDNEVK 108
Score = 123 (48.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 42/131 (32%), Positives = 61/131 (46%)
Query: 203 DGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLLFSGGCDRWIVVW 261
D IRVW +S D R + T L H T+ LA + G L S D + VW
Sbjct: 35 DKTIRVWNKSDTD-------RWVAQTVLTDGHTRTIRELAWSCCGHYLASASFDTTVAVW 87
Query: 262 ERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ----RGKENCYRCM 315
+++ A L GH + + G+LLA+ S D++V IW+ +E+ Y C+
Sbjct: 88 DKKSGEFECNA-TLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQEDEYECV 146
Query: 316 AFLEGHEKPVK 326
A L GH + VK
Sbjct: 147 AVLNGHTQDVK 157
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 138 (53.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 43/151 (28%), Positives = 70/151 (46%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 586 DRVARLWATDHYQPLR-IFAGHLADVTCTRFHPNSNYIATGSADRTVRLWD--VLNGN-- 640
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++LA + +G L +G D +++W+ H ++ E L GHT
Sbjct: 641 ------CVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 691
Query: 280 GALLCL--INVGDLLASGSADRTVRIWQRGK 308
+ L G++LASGS D TVR+W K
Sbjct: 692 DTIYALRFSRDGEILASGSMDNTVRLWDAVK 722
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 137 (53.3 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 71/292 (24%), Positives = 122/292 (41%)
Query: 28 HHMIISCLAVHNSLLYAA-SLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIF 86
+H + S L + ++LL+ S N I V+D S +++ G V+SI ++ +F
Sbjct: 460 YH-VTSHLCICDNLLFTGCSDNSIRVYDYKSQ--NMECVQTLKGHEGPVESICYNDQYLF 516
Query: 87 TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNN-YVTVRRHKK--RLW----L 139
+ D I+VW + R + TL D+ + +VL N+ Y+ K ++W L
Sbjct: 517 SGSSDHSIKVWDLKKLR---CIFTLEG-HDKPVHTVLLNDKYLFSGSSDKTIKVWDLKTL 572
Query: 140 E-------HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXX 192
E H AV L + ++S S D++ K+W+ ++C ++ K H
Sbjct: 573 ECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNYTL-KGH-TKWVTTICI 630
Query: 193 XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSG 252
Y+GS D IRVW ++ + TL H V + + LLF+
Sbjct: 631 LGTNLYSGSYDKTIRVWNLKSLECS----------ATLRGHDRWVEHMVICD--KLLFTA 678
Query: 253 GCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
D I +W+ E E T L + + S S D+++R+W
Sbjct: 679 SDDNTIKIWDLETLRCNTTLEG-HNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
++GS+D I+VW+ ++ ++ TL H V L ++G LFSG D+
Sbjct: 556 FSGSSDKTIKVWDLKTLE------CKY----TLESHARAVKTLCISGQ--YLFSGSNDKT 603
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAF 317
I VW+ + R + L GHT + + +G L SGS D+T+R+W C A
Sbjct: 604 IKVWDL-KTFRCNYT--LKGHTKWVTTICILGTNLYSGSYDKTIRVWNL---KSLECSAT 657
Query: 318 LEGHEKPVK 326
L GH++ V+
Sbjct: 658 LRGHDRWVE 666
Score = 126 (49.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 42/130 (32%), Positives = 63/130 (48%)
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHM-LVTTLVKHRSTVNALALNGDGSLLFSGGCDR 256
+TG +D IRV+ D+ KS++M V TL H V ++ N LFSG D
Sbjct: 474 FTGCSDNSIRVY-----DY----KSQNMECVQTLKGHEGPVESICYNDQ--YLFSGSSDH 522
Query: 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMA 316
I VW+ ++ R +F L GH + ++ L SGS+D+T+++W C
Sbjct: 523 SIKVWDLKK-LRCIFT--LEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDL---KTLECKY 576
Query: 317 FLEGHEKPVK 326
LE H + VK
Sbjct: 577 TLESHARAVK 586
Score = 119 (46.9 bits), Expect = 0.00048, P = 0.00048
Identities = 34/117 (29%), Positives = 62/117 (52%)
Query: 213 VVDHNKERKSRHM----LVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHR 268
++ +NK+++S ++ L+ T+ + T + + +LLF+G D I V++ +
Sbjct: 436 ILINNKKKESINLETIKLIETIKGYHVTSHLCICD---NLLFTGCSDNSIRVYDY-KSQN 491
Query: 269 MVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
M + L GH G + + L SGS+D ++++W K RC+ LEGH+KPV
Sbjct: 492 MECVQTLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKK---LRCIFTLEGHDKPV 545
>DICTYBASE|DDB_G0277533 [details] [associations]
symbol:DDB_G0277533 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0277533 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000020 KO:K15361
InterPro:IPR021772 Pfam:PF11816 RefSeq:XP_642597.1
ProteinModelPortal:Q54ZP5 EnsemblProtists:DDB0237514 GeneID:8621014
KEGG:ddi:DDB_G0277533 InParanoid:Q54ZP5 Uniprot:Q54ZP5
Length = 1172
Score = 96 (38.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 135 KRLWLEHWDAVSDLVVKQG-LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXX 193
K+ + +H D V+DL ++ S S D + KIWN + +C+ S+ K H+
Sbjct: 203 KKSFNDHTDWVNDLFFNDSNILVSCSSDSTIKIWNTDSERCVNSL-KFHDDYVKVLAYAP 261
Query: 194 XXXXYTGSA-DGRIRVWERSV 213
+ S D I++W+ S+
Sbjct: 262 KANYFASSGLDSHIKIWDLSI 282
Score = 91 (37.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 236 TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC-LINVGDLLA- 293
++ +LA+ D S + SG +R I W+ R + +F L GHT + L+N
Sbjct: 564 SIYSLAIAQDASFVVSGSTERAIRGWD-VRSGQKIFK--LKGHTDNIRSILLNDNSTRCL 620
Query: 294 SGSADRTVRIWQRGKENC 311
S S+D TVR+W G++ C
Sbjct: 621 SASSDGTVRLWDIGEQRC 638
>TAIR|locus:2096254 [details] [associations]
symbol:LRS1 "AT3G05090" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010311 KO:K15361
InterPro:IPR021772 Pfam:PF11816 GO:GO:0080008 HOGENOM:HOG000007343
OMA:NRLYSAG EMBL:AY056292 EMBL:AY127022 EMBL:AY142674 EMBL:BT000631
EMBL:AK226843 IPI:IPI00517137 RefSeq:NP_566246.1 RefSeq:NP_850516.1
UniGene:At.48620 ProteinModelPortal:Q93ZS6 SMR:Q93ZS6 PaxDb:Q93ZS6
PRIDE:Q93ZS6 EnsemblPlants:AT3G05090.1 EnsemblPlants:AT3G05090.2
GeneID:819671 KEGG:ath:AT3G05090 TAIR:At3g05090 InParanoid:Q93ZS6
PhylomeDB:Q93ZS6 ProtClustDB:CLSN2688081 ArrayExpress:Q93ZS6
Genevestigator:Q93ZS6 Uniprot:Q93ZS6
Length = 753
Score = 136 (52.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 32/96 (33%), Positives = 51/96 (53%)
Query: 224 HMLVTTLVK-HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG-- 280
H T+ K H+ +V ALA+N G++L SGG ++ + VW+ + + L GHT
Sbjct: 202 HGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSM---KLRGHTDNV 258
Query: 281 ALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMA 316
+L L + G SGS+D +R+W G++ C A
Sbjct: 259 RVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/206 (24%), Positives = 81/206 (39%)
Query: 133 HKKRLWLEHWDAVSDLVVKQG-LMYSVSWDRSFKIWNASN----YKCLESVNKAHEXXXX 187
H R+W W+ VS ++ S S D + +IW S+ + C + + H
Sbjct: 19 HTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVR 78
Query: 188 XXXXXXXXXXY-TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG 246
T S DG +W K S ++TL H + V +++ N G
Sbjct: 79 SCAWSPSGQLLATASFDGTTGIW--------KNYGSEFECISTLEGHENEVKSVSWNASG 130
Query: 247 SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIW 304
S L + D+ + +WE + A L GHT + + D+L S S D T+++W
Sbjct: 131 SCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Query: 305 -QRGKENCYRCMAFL----EGHEKPV 325
+ Y+C+ L GH V
Sbjct: 191 WSEDDDGEYQCVQTLGESNNGHSSTV 216
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
S D +R+WE+S + + K+ +L T H TV + A + G LL + D +
Sbjct: 46 SGDNTVRIWEQSSLSRSWTCKT--VLEET---HTRTVRSCAWSPSGQLLATASFDGTTGI 100
Query: 261 WERERDHRMVFAEALWGHTGALLCLI-NV-GDLLASGSADRTVRIWQRGKENCYRCMAFL 318
W + L GH + + N G LA+ S D++V IW+ + N Y C A L
Sbjct: 101 W-KNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 319 EGHEKPVK 326
GH + VK
Sbjct: 160 TGHTQDVK 167
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 130 (50.8 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 66/274 (24%), Positives = 113/274 (41%)
Query: 48 NEINVFDLISDYSHVDTFSNDLSSSGS-VKSITFHITKIFTAHQDCKIRVWKITASRQHQ 106
NE +V D S + + S G +KS H ++++ + + IT S
Sbjct: 70 NECHVASSSGDGS-IKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQS 128
Query: 107 LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKI 166
+ P + DR ++ T R H+ ++ W + L SVS DR+ KI
Sbjct: 129 IKIWNPRM-DRSLK--------TFREHRYCIYSAIWSPRN-----AHLFASVSGDRTLKI 174
Query: 167 WNASNYKCLESVNKAH--EXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRH 224
W++ + + L ++ KAH E TGS D IR+W+ D
Sbjct: 175 WDSRDNRSLNTI-KAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRP------- 226
Query: 225 MLVTTLVK-HRSTVNALALNGDG-SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL 282
TT+++ H V + + S+L S D ++VW+R R+ + A + HT +
Sbjct: 227 ---TTILRGHTYAVRRIKCSPHSESMLASCSYDMSVIVWDRAREQDPIIAR-MDHHTEFV 282
Query: 283 LCL---INVGDLLASGSADRTVRIWQRGKENCYR 313
+ L + + +AS S D V +W G+ +R
Sbjct: 283 VGLDWNMFIDGQMASCSWDEQVCVWNLGRPGQFR 316
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 132 (51.5 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 40/154 (25%), Positives = 70/154 (45%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
LM SVS DR+ K+W+AS+ + + + + T S+D +RVW+
Sbjct: 158 LMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT 217
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
H L+ H + VNAL+ + G+ L + D + + + + R+++
Sbjct: 218 ----------HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDL-LEGRLLYT- 265
Query: 274 ALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
L GH G+ C+ GD AS +D+ V +W+
Sbjct: 266 -LHGHQGSASCVSFSRSGDQFASAGSDQQVMVWR 298
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 130 (50.8 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 45/181 (24%), Positives = 83/181 (45%)
Query: 152 QGLMYSVSWDRSFKIWNAS--NYKCLESVNK-AHEXXXXXXXXXXXXXXYT-GSADGRIR 207
QG++ + S DR K+ + ++ ++ +++ AH+ GS D +
Sbjct: 24 QGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83
Query: 208 VWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWER-ERD 266
+W + + + +R L+ + H + V +A + DG L + D+ + +WE E
Sbjct: 84 IWAK---EESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESG 140
Query: 267 HRMVFAEALWGHTGALLCLI-NVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKP 324
L H+ + +I + + LLAS S D TVRIW + ++ + C+A L GHE
Sbjct: 141 EEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW-KDYDDDWECVAVLNGHEGT 199
Query: 325 V 325
V
Sbjct: 200 V 200
>TAIR|locus:2155904 [details] [associations]
symbol:AT5G49200 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR000571 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082
PROSITE:PS50103 PROSITE:PS50294 SMART:SM00320 SMART:SM00356
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB016872 HOGENOM:HOG000239729
ProtClustDB:CLSN2686199 EMBL:AJ252066 IPI:IPI00517790
RefSeq:NP_199731.1 UniGene:At.64278 ProteinModelPortal:Q9FE91
SMR:Q9FE91 STRING:Q9FE91 PRIDE:Q9FE91 EnsemblPlants:AT5G49200.1
GeneID:834979 KEGG:ath:AT5G49200 GeneFarm:3799 TAIR:At5g49200
InParanoid:Q9FE91 PhylomeDB:Q9FE91 Genevestigator:Q9FE91
Uniprot:Q9FE91
Length = 419
Score = 114 (45.2 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 237 VNALAL-NGDGSLLFSGGCDRWIVVWERERDHR---MVFAEALWGHTGALLCLINVGDLL 292
VNA+ + NG +LF+G I+VW+ D + +L GH+G + C G +L
Sbjct: 215 VNAMTIANG---MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQML 271
Query: 293 ASGSADRTVRIWQRGKENCYRCMAFLEGH 321
SGS D+T+++W N +C+ L+ H
Sbjct: 272 YSGSVDKTIKMWDL---NTLQCIMTLKQH 297
Score = 59 (25.8 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 8/25 (32%), Positives = 19/25 (76%)
Query: 155 MYSVSWDRSFKIWNASNYKCLESVN 179
++SVS D + ++W+ ++ +C+ S+N
Sbjct: 146 LFSVSIDGTLRVWDCNSGQCVHSIN 170
Score = 39 (18.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 198 YTGSADGRIRVWE 210
++ S DG +RVW+
Sbjct: 147 FSVSIDGTLRVWD 159
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 130 (50.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 203 DGRIRVWERSVVDHNKERKSRHMLVTTLV-KHRSTVNALALNGDGSLLFSGGCDRWIVVW 261
D +RVW S+V + K R TTL H V ++A + DG L S D +VV+
Sbjct: 38 DKAVRVW--SLVGE-PDSKMRLECRTTLDDSHTRAVRSVAFSNDGKCLVSASFDASVVVY 94
Query: 262 ERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
++E D L GH + C + + LA+ S D++V WQ+ ++ + + L+
Sbjct: 95 QQE-DGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQ 153
Query: 320 GHEKPVK 326
H + VK
Sbjct: 154 PHTQDVK 160
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 130 (50.8 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 203 DGRIRVWERSVVDHNKERKSRHMLVTTLV-KHRSTVNALALNGDGSLLFSGGCDRWIVVW 261
D +RVW S+V + K R TTL H V ++A + DG L S D +VV+
Sbjct: 38 DKAVRVW--SLVGE-PDSKMRLECRTTLDDSHTRAVRSVAFSNDGKCLVSASFDASVVVY 94
Query: 262 ERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
++E D L GH + C + + LA+ S D++V WQ+ ++ + + L+
Sbjct: 95 QQE-DGEFAEVNKLEGHESEVKCAVFSKSDEFLATCSRDKSVWFWQQDEDEDFSVSSILQ 153
Query: 320 GHEKPVK 326
H + VK
Sbjct: 154 PHTQDVK 160
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 130 (50.8 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 46/203 (22%), Positives = 89/203 (43%)
Query: 130 VRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXX 189
+R+HK + + A+ L V L+ SVS D + K+W++ + C++++ + +
Sbjct: 128 IRKHKGHAGVVN--ALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAI 185
Query: 190 XXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLL 249
+ G DG I++W+ + H+L H+ + +LA++ DGS L
Sbjct: 186 AQQGTQV-FIGGIDGAIKIWDL------RNNHCSHVLKG----HKDIITSLAISKDGSSL 234
Query: 250 FSGGCDRWIVVWERE-----RDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVR 302
S D + +++ + + +F A+ G LL + + +GS+D+ V
Sbjct: 235 LSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVY 294
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
+W + Y L GHE V
Sbjct: 295 VWSATGDLRY----VLPGHEGSV 313
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 366 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD--VLNGN-- 420
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++L + +G L +G D +++W+ H ++ E L GHT
Sbjct: 421 ------CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 471
Query: 280 GALLCL--INVGDLLASGSADRTVRIWQRGK 308
+ L G++LASGS D TVR+W K
Sbjct: 472 DTVCSLRFSRDGEILASGSMDNTVRLWDAVK 502
>ZFIN|ZDB-GENE-050417-160 [details] [associations]
symbol:wdr38 "WD repeat domain 38" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-050417-160
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
HOGENOM:HOG000091642 CTD:401551 HOVERGEN:HBG106736
OrthoDB:EOG4ZW5BD EMBL:BC093164 IPI:IPI00570124
RefSeq:NP_001017672.1 UniGene:Dr.91594 ProteinModelPortal:Q567I2
STRING:Q567I2 GeneID:550366 KEGG:dre:550366 InParanoid:Q567I2
NextBio:20879618 Uniprot:Q567I2
Length = 216
Score = 123 (48.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/159 (27%), Positives = 64/159 (40%)
Query: 166 IWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKERKSRH 224
+W S K L SV+ H + + S D +R W N K H
Sbjct: 48 LWKTSTAKLLASVS-GHTGPVKCCVFSSDGRLFASASHDCSVRTW------CNSSLKCTH 100
Query: 225 MLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC 284
TL HR +V ++ + DG L SGG D ++W + E L GH A+
Sbjct: 101 ----TLTAHRRSVETVSFSPDGQWLLSGGWDNRALIWSIQSG---ALLEELKGHNAAVQS 153
Query: 285 LINVGDL--LASGSADRTVRIWQRGKENCYRCMAFLEGH 321
+ D +A+GS DR VR+W+ + L+GH
Sbjct: 154 SVFSSDSQSVATGSWDRAVRVWKLRDRQAEAVV--LQGH 190
Score = 99 (39.9 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 37/142 (26%), Positives = 55/142 (38%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L S S D S + W S+ KC ++ +G D R +W S+
Sbjct: 78 LFASASHDCSVRTWCNSSLKCTHTLTAHRRSVETVSFSPDGQWLLSGGWDNRALIW--SI 135
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
L+ L H + V + + D + +G DR + VW+ RD R A
Sbjct: 136 --------QSGALLEELKGHNAAVQSSVFSSDSQSVATGSWDRAVRVWKL-RD-RQAEAV 185
Query: 274 ALWGHTGALLCL-INVGDLLAS 294
L GH G + CL +V +L S
Sbjct: 186 VLQGHLGNVACLCFSVAGMLVS 207
Score = 45 (20.9 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 72 SGSVKSITFHIT-KIF-TAHQDCKIRVW 97
+G VK F ++F +A DC +R W
Sbjct: 64 TGPVKCCVFSSDGRLFASASHDCSVRTW 91
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 58/227 (25%), Positives = 101/227 (44%)
Query: 105 HQLVSTLPTVK-DRLIR--SVLPN--NYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVS 159
H STL + DRLI SV + NY T++ H + H++ +D +++S S
Sbjct: 76 HPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYN--TD----GSMLFSAS 129
Query: 160 WDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHN 217
D++ +W++ + ++ + K H TGS DG +++W+
Sbjct: 130 TDKTVAVWDSETGERVKRL-KGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDI------ 182
Query: 218 KERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWG 277
RK + T ++ V A+ N + SGG D I VW+ R +++ + + G
Sbjct: 183 --RKKA--AIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRG 234
Query: 278 HTGAL--LCLINVGDLLASGSADRTVRIWQ-RGKENCYRCMAFLEGH 321
H ++ L L + G L S + D TVR+W R RC+ +G+
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGN 281
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 48/201 (23%), Positives = 90/201 (44%)
Query: 126 NYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXX 185
NY T++ H + H++ +D L++S S D++ +W++ + ++ + K H
Sbjct: 91 NYATLKGHSGAVMELHYN--TD----GSLLFSASTDKTVCVWDSETGERVKRL-KGHTSF 143
Query: 186 XXXXXXXXXX--XXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALN 243
TGS DG +++W+ +++ S H T V ++ N
Sbjct: 144 VNSCFPARRGPQLACTGSDDGTVKLWDI------RKKASVHTFQNTY-----QVLSVTFN 192
Query: 244 GDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTV 301
+ SGG D I VW+ R ++++++ + GH ++ L L G L S S D +V
Sbjct: 193 DTSDQIISGGIDNDIKVWDL-RQNKLIYS--MQGHGDSVTGLSLSADGSYLLSNSMDNSV 249
Query: 302 RIWQ-RGKENCYRCMAFLEGH 321
R+W R RC+ +G+
Sbjct: 250 RVWDIRPFAPKERCVKIFQGN 270
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 129 (50.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 49/188 (26%), Positives = 81/188 (43%)
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK-C-LESVNK-AHEXXXXXXXXX 192
+L + H D V L Q L+ SV D S ++W + K C LE++ + A+
Sbjct: 374 KLIVGHSDTVMSLAASQNLLISVGKDCSVRLWRLQHDKDCSLEALTQQANCHTSTIGCVA 433
Query: 193 XXXXXYTG----SADGRIRVWERSVVDHNKERKSRHM-LVTTLVKHRSTVNALALNGDGS 247
TG S DG ++VW+ +V ++R S L + H VN +A +
Sbjct: 434 MTHNGATGFASVSQDGSMKVWQ--LVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNK 491
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQ 305
L+ + D+ VW E + L GHT + + V ++ + S+D T+RIW
Sbjct: 492 LIATASQDKTAKVWLAESN---TLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWS 548
Query: 306 RGKENCYR 313
+C +
Sbjct: 549 ISNFSCIK 556
Score = 46 (21.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 24/100 (24%), Positives = 44/100 (44%)
Query: 16 CIASLKIPSPDPHHMIISCLAVHNSLLYAA-SLNEINVFDLISDYSHVDTFSNDLSS-SG 73
C+ +LK P P +++ V +YA S N + ++ + + V LS +G
Sbjct: 154 CLGALK-DFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETK-TLVHKMRGHLSQVTG 211
Query: 74 -SVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLP 112
S KS +I T +D + VW++ + + + LP
Sbjct: 212 LSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVLP 251
Score = 41 (19.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 17/84 (20%), Positives = 33/84 (39%)
Query: 24 SPDPHHMIISCL---AVHNSLLYAAS-LNEINVFDLISDYSHVDTFSNDLSSSGSVKSIT 79
SP+ HH+ CL AV+ + + LN + +D N ++
Sbjct: 28 SPNGHHLY--CLNGSAVNQVDVQTSQILNSYGLSSPSADNKRPAELDNIDVEEDTITCFG 85
Query: 80 FHITKIFTAHQDCKIRVWKITASR 103
+ TAH+ +R+W++ +
Sbjct: 86 LSQEHLVTAHRSGLLRLWQLDTGK 109
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 63/254 (24%), Positives = 107/254 (42%)
Query: 74 SVKSITF-HITKIF-TAHQDCKIRVWKI-TASRQHQLVSTLPTVKDRLIRSVLPNN---- 126
+V S+++ H +++ +A D +++W T S QH TL D L+RSV+ ++
Sbjct: 298 AVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQH----TLEGHSD-LVRSVIFSHDSRL 352
Query: 127 YVTVRRHKKRLW----------LE-HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYK 173
+ ++W LE H D V ++ L+ S S D + KIW+
Sbjct: 353 LASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS 412
Query: 174 CLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKH 233
++ + + S D +++W+ +H TL H
Sbjct: 413 LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT------GSLQH----TLEGH 462
Query: 234 RSTVNALALNGDGSLLFSGGCDRWIVVWERER-DHRMVFAEALWGHTGALLCLINVGD-- 290
R V ++ + D LL S DR + +W+ E+ H+ L GH+ + + D
Sbjct: 463 RDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHK----HTLEGHSSLVTSVSFSHDSR 518
Query: 291 LLASGSADRTVRIW 304
LLAS S D+TVRIW
Sbjct: 519 LLASASNDQTVRIW 532
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 39/166 (23%), Positives = 75/166 (45%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
D++ K+W+ K ++ HE +GS D + ++W+ ++
Sbjct: 348 DKTVKVWDIHTKK-IQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI------EK 400
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
K L V ++ V ++A++ DG L+ +G D + +W+ + + F E GH
Sbjct: 401 GKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGY---FLERYEGHL 457
Query: 280 GAL--LCLINVGDLLASGSADRTVRIWQ-RGKENCYRCMAFLEGHE 322
++ + G LASGS D+++++W G + RC A GH+
Sbjct: 458 DSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHK 503
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 210 ERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM 269
E+++ D +S H + H S V+++ N DG L SG D+ +VV+ ERD R
Sbjct: 5 EQTLEDLKSYLRS-HSKIREQRSHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERD-RF 62
Query: 270 VFAEALWGHTGAL--LCLINVG-DLLASGSADRTVRIW 304
+ GHT ++ LC D A+ S D+TVRIW
Sbjct: 63 LKGNTYRGHTASVDQLCWHRTNPDQFATASGDKTVRIW 100
>POMBASE|SPCC126.01c [details] [associations]
symbol:SPCC126.01c "conserved fungal protein"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPCC126.01c GO:GO:0005829 GO:GO:0005634
GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 PIR:T40905 RefSeq:NP_588444.2
ProteinModelPortal:O94394 EnsemblFungi:SPCC126.01c.1 GeneID:2538691
KEGG:spo:SPCC126.01c OMA:WTASADK OrthoDB:EOG4BK8CJ NextBio:20799877
Uniprot:O94394
Length = 369
Score = 127 (49.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/154 (24%), Positives = 65/154 (42%)
Query: 155 MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVV 214
+Y+ SWD + K WN S +C+E++ + +GS D + VW+ S
Sbjct: 105 IYTGSWDHTIKKWNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVS-- 162
Query: 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER-DHRMVFAE 273
+ SR L+ L H + + + + ++ G + I W + + E
Sbjct: 163 ----SQPSR--LLYKLTGHSRGIECITRQPNTDIFWTCGSESSIRCWHITKVGGSQLEEE 216
Query: 274 ALWGHTGALLCLI---NVGDLLASGSADRTVRIW 304
WGH + CL+ + L + SAD+TVR W
Sbjct: 217 GFWGHQSNVYCLLFDPQDSEALWTASADKTVREW 250
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 128 (50.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 60/243 (24%), Positives = 101/243 (41%)
Query: 72 SGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVL--PNNY 127
S SV+S+ F + + D I++W S L T+ DR + SV PN
Sbjct: 83 SSSVQSVAFSPNGQLLASGSSDTTIKLWN---SASDSLKHTMEGHSDR-VESVAFSPNGQ 138
Query: 128 V-TVRRHKKRLWLE-HWDAVSDLVVK-QG-LMYSVSWDRSFKIWNASNYKCLESVNKAHE 183
+ + +E H D V + G L+ S S +++ K+W+++ ++
Sbjct: 139 LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSN 198
Query: 184 XXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALN 243
+GS D I++W+ +H TL H + + +LA +
Sbjct: 199 WVLPLVFSPDGRLLASGSNDATIKLWDPP------SGSLKH----TLEGHSNKIESLAFS 248
Query: 244 GDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTV 301
+G LL SG D I +W+ F L GH+ +L ++ D LL SGS D T+
Sbjct: 249 PNGQLLASGSSDATIKLWDTATGS---FRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTI 305
Query: 302 RIW 304
++W
Sbjct: 306 KLW 308
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 126 (49.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/89 (39%), Positives = 46/89 (51%)
Query: 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSA 297
+A N G+LL S G DR I +W RE D GH A+ + G+ LAS S
Sbjct: 22 VAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGHQRAVRKVAWSPCGNYLASASF 81
Query: 298 DRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T IW++ K + + C+ LEGHE VK
Sbjct: 82 DATTCIWKK-KNDDFECLTVLEGHENEVK 109
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 52/180 (28%), Positives = 77/180 (42%)
Query: 157 SVSWDRSFKIWNASN--YKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSV 213
S S+D + IW N ++CL +V + HE T S D + +WE
Sbjct: 78 SASFDATTCIWKKKNDDFECL-TVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWE--- 133
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
VD E + V+ + H V + + LL S D + V++ E D A
Sbjct: 134 VDEEDE----YECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRA- 188
Query: 274 ALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR-----GKENCYRCMAFLEG-HEKPV 325
L GHT + L G LAS S DRTV+IW+ G++ ++C+ L G H + V
Sbjct: 189 TLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTV 248
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 127 (49.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 50/202 (24%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 127 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 179
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK V T ++ V A+
Sbjct: 180 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AVQTF-QNTYQVLAVTF 228
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 229 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 285
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VRIW R RC+ +G+
Sbjct: 286 VRIWDVRPFAPKERCVKIFQGN 307
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 606 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD--VLNGN-- 660
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++L + +G L +G D +++W+ H ++ E L GHT
Sbjct: 661 ------CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 711
Query: 280 GALLCL--INVGDLLASGSADRTVRIWQRGK 308
+ L G++LASGS D TVR+W K
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWDAVK 742
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 607 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD--VLNGN-- 661
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++L + +G L +G D +++W+ H ++ E L GHT
Sbjct: 662 ------CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 712
Query: 280 GALLCL--INVGDLLASGSADRTVRIWQRGK 308
+ L G++LASGS D TVR+W K
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 131 (51.2 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/151 (27%), Positives = 69/151 (45%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 607 DRVARLWATDHYQPLR-IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWD--VLNGN-- 661
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++L + +G L +G D +++W+ H ++ E L GHT
Sbjct: 662 ------CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 712
Query: 280 GALLCL--INVGDLLASGSADRTVRIWQRGK 308
+ L G++LASGS D TVR+W K
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWDAVK 743
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 135 (52.6 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 44/169 (26%), Positives = 72/169 (42%)
Query: 141 HWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H+D+ + L + + S D K+W+ ++ CL + + +
Sbjct: 344 HFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMF 403
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW- 257
+ S DG +R W D + R R T R N LA++ G ++ +G D +
Sbjct: 404 SSSLDGTVRAW-----DLIRYRNFRTFTGT----ERIQFNCLAVDPSGEVVCAGSLDNFD 454
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIW 304
I VW + + +AL GH G + CL +LAS S D+T+RIW
Sbjct: 455 IHVWSVQTGQLL---DALSGHEGPVSCLSFSQENSVLASASWDKTIRIW 500
Score = 40 (19.1 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 84 KIFTAHQDCKIRVWKIT 100
KI+T +D + VW+ T
Sbjct: 205 KIYTVSKDGAVFVWEFT 221
Score = 38 (18.4 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 48 NEINVFDLISDYS 60
N ++VFDLI++ S
Sbjct: 35 NRVSVFDLINNKS 47
Score = 38 (18.4 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKD 116
I T +D ++W + + ++ +T +D
Sbjct: 161 ILTTSKDLSAKIWSVDSEEKNLAATTFNGHRD 192
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 126 (49.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 101 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 153
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK V T ++ V A+
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AVQTF-QNTYQVLAVTF 202
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 203 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VR+W R RC+ +G+
Sbjct: 260 VRVWDVRPFAPKERCVKIFQGN 281
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV--GD 290
H+ TV +A + G+ L S D +W+++ D L GH + C+ G+
Sbjct: 60 HQRTVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLT-VLEGHENEVKCVAWAPSGN 118
Query: 291 LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LLA+ S D++V IW+ +EN Y C++ + H + VK
Sbjct: 119 LLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVK 154
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/89 (39%), Positives = 45/89 (50%)
Query: 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH--TGALLCLINVGDLLASGSA 297
+A N G+LL S G DR I +W RE D GH T + G+ LAS S
Sbjct: 22 VAWNPKGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSPCGNYLASASF 81
Query: 298 DRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T IW++ K + + C+ LEGHE VK
Sbjct: 82 DATTCIWKK-KNDDFECLTVLEGHENEVK 109
Score = 115 (45.5 bits), Expect = 0.00041, P = 0.00041
Identities = 45/196 (22%), Positives = 80/196 (40%)
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWN--ASNYKCLESVNKAHEXXXXXXXXXX 193
R W W+ K L+ S DR+ +IW +++C + H+
Sbjct: 18 RCWYVAWNP------KGTLLASCGGDRTIRIWGREGDSWECKTVLQDGHQRTVRKVAWSP 71
Query: 194 XXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251
Y SA D +W K++ +T L H + V +A G+LL +
Sbjct: 72 CGN-YLASASFDATTCIW--------KKKNDDFECLTVLEGHENEVKCVAWAPSGNLLAT 122
Query: 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
D+ + +WE + ++ + HT + ++ +LLAS S D V +++ ++
Sbjct: 123 CSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKE-ED 181
Query: 310 NCYRCMAFLEGHEKPV 325
+ + C A LEGH V
Sbjct: 182 DDWECRATLEGHTSTV 197
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 130 (50.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 604 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD--VLNGN-- 658
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++L + +G L +G D +++W+ H ++ E L GHT
Sbjct: 659 ------CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 709
Query: 280 GALLCL--INVGDLLASGSADRTVRIW 304
+ L G++LASGS D TVR+W
Sbjct: 710 DTVCSLRFSRDGEILASGSMDNTVRLW 736
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 130 (50.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 161 DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY-TGSADGRIRVWERSVVDHNKE 219
DR ++W +Y+ L + H TGSAD +R+W+ V++ N
Sbjct: 606 DRVARLWATDHYQPLR-IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD--VLNGN-- 660
Query: 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT 279
V H+ +++L + +G L +G D +++W+ H ++ E L GHT
Sbjct: 661 ------CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDI--GHGLMVGE-LKGHT 711
Query: 280 GALLCL--INVGDLLASGSADRTVRIW 304
+ L G++LASGS D TVR+W
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLW 738
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 40/167 (23%), Positives = 74/167 (44%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ +N +C+ + + + +
Sbjct: 15 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASA 74
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D ++VW+ V NK +H V H VN ++ + G+ L + D + +
Sbjct: 75 GSDQTVKVWDVRV---NK--LLQHYQV-----HSGGVNCISFHPSGNYLITASSDGTLKI 124
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ + R+++ L GHTG + + G+L ASG AD V +W+
Sbjct: 125 LDL-LEGRLIYT--LQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 168
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 100 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 152
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK + T ++ V A+
Sbjct: 153 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AIQTF-QNTYQVLAVTF 201
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 202 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 258
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VR+W R RC+ +G+
Sbjct: 259 VRVWDVRPFAPKERCVKIFQGN 280
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 101 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 153
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK + T ++ V A+
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AIQTF-QNTYQVLAVTF 202
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 203 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VR+W R RC+ +G+
Sbjct: 260 VRVWDVRPFAPKERCVKIFQGN 281
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 101 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 153
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK + T ++ V A+
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AIQTF-QNTYQVLAVTF 202
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 203 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VR+W R RC+ +G+
Sbjct: 260 VRVWDVRPFAPKERCVRIFQGN 281
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 125 (49.1 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 101 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 153
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK + T ++ V A+
Sbjct: 154 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AIQTF-QNTYQVLAVTF 202
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 203 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 259
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VR+W R RC+ +G+
Sbjct: 260 VRVWDVRPFAPKERCVKIFQGN 281
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 124 (48.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIWN---ASNYKCL-ESVNKAHEXXXXXXXXXXX 194
H D V L V ++G ++ S + D+S +IW A C+ + H
Sbjct: 375 HTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKAGQVACVAQGSGHTHSVGTICCSRLKE 434
Query: 195 XXXYTGSADGRIRVWE--RSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLL 249
TGS D +++W +++ + S +L+ TT H +N+LA++ + LL
Sbjct: 435 SFLVTGSQDCTVKLWPLPEALLAKSTAADSGPVLLQAQTTRRCHDKDINSLAVSPNDKLL 494
Query: 250 FSGGCDRWIVVWERERDHRM-VFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR 306
+G DR +W + + VF GH L + +LA+ SAD T+++W
Sbjct: 495 ATGSQDRTAKLWALPQCQLLGVFT----GHRRGLWNVQFSPTDQVLATASADGTIKLWAL 550
Query: 307 GKENCYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 551 QD---FSCLKTFEGHDASV 566
Score = 49 (22.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHI--TKI--FTAHQDCKIRVWKI 99
+ V+D++ Y F S G V + FH T++ F++ D IRVW +
Sbjct: 133 VRVWDIVQHYG-THHFRG---SPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSL 182
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 44/198 (22%), Positives = 82/198 (41%)
Query: 133 HKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK--CLESVNKAHEXXXXXXX 190
H+ R+W W + V+ S D++ +IW K C + H+
Sbjct: 4 HEDRVWSVAWSP-NGFVLA-----SCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLG 57
Query: 191 XXXXXXXY-TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLL 249
+ S D +W+ ++ TL H + V ++ + GSLL
Sbjct: 58 WSPCGTFLASASFDATTCIWD--------QKSGEFECNATLEGHENEVKSVDWSVSGSLL 109
Query: 250 FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRG 307
+ G D+ + +WE + D A + HT + ++ ++LAS S D T+++++
Sbjct: 110 ATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYKED 169
Query: 308 KENCYRCMAFLEGHEKPV 325
+++ + C LEGHE V
Sbjct: 170 EDD-WSCCDTLEGHESTV 186
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 124 (48.7 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 49/193 (25%), Positives = 80/193 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 82 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 134
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 184
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 305 QRGKENC---YRC 314
K C Y C
Sbjct: 242 DYSKGKCLKTYTC 254
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 123 (48.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 56 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 108
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 109 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 158
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 159 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 215
Query: 305 QRGKENCYR 313
K C +
Sbjct: 216 DYSKGKCLK 224
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 125 (49.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
+NY T++ H + H++ +D +++S S D++ +W++ + ++ + K H
Sbjct: 100 DNYATLKGHSGAVMELHYN--TD----GSMLFSASTDKTVAVWDSETGERVKRL-KGHTS 152
Query: 185 XXXXXXXXXXXXXY--TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242
TGS DG +++W+ RK + T ++ V A+
Sbjct: 153 FVNSCYPARRGPQLVCTGSDDGTVKLWDI--------RKKA--AIQTF-QNTYQVLAVTF 201
Query: 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRT 300
N + SGG D I VW+ R +++ + + GH ++ L L + G L S + D T
Sbjct: 202 NDTSDQIISGGIDNDIKVWDL-RQNKLTYT--MRGHADSVTGLSLSSEGSYLLSNAMDNT 258
Query: 301 VRIWQ-RGKENCYRCMAFLEGH 321
VR+W R RC+ +G+
Sbjct: 259 VRVWDVRPFAPKERCVKIFQGN 280
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 125 (49.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLIN 287
L HR+ +N++ + SL+ S D I VW+ E F L GHT A+ +
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGE---FERTLKGHTNAVQDIDFDK 158
Query: 288 VGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
G+LLAS SAD T+++W Y C+ L GH+ V
Sbjct: 159 TGNLLASCSADLTIKLWDF---QTYDCVKTLHGHDHNV 193
Score = 99 (39.9 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 32/123 (26%), Positives = 52/123 (42%)
Query: 141 HWDAVSDLVV-KQG-LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H +AV D+ K G L+ S S D + K+W+ Y C+++++
Sbjct: 147 HTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLI 206
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I+VWE + + TLV H V + ++ DGS + S D+ I
Sbjct: 207 SSSRDKTIKVWEAAT----------GYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTI 256
Query: 259 VVW 261
W
Sbjct: 257 KTW 259
Score = 67 (28.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 292 LASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LA+GS D+T++IW+ RC+A GH+ V+
Sbjct: 319 LATGSRDKTIKIWELATG---RCLATYIGHDNWVR 350
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 62/244 (25%), Positives = 99/244 (40%)
Query: 87 TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVS 146
TA D IR + S +L++T +D+LIR + ++ +R K L D S
Sbjct: 251 TASGDLYIR--SVCFSPDGKLLAT--GAEDKLIR-IWD---LSTKRIIKILRGHEQDIYS 302
Query: 147 -DLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGR 205
D + S S DRS +IW+ +C +++ + GS D
Sbjct: 303 LDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRT 361
Query: 206 IRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE- 264
+RVW+ S ER H +V ++A + +G + SG DR + +W E
Sbjct: 362 VRVWD-STTGFLVERLDSGNENGN--GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG 418
Query: 265 RDHRMVFAEALW-GHTGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGH 321
+ + E + GH +L C + + SGS DR V W + N + L+GH
Sbjct: 419 KSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP---LLMLQGH 475
Query: 322 EKPV 325
V
Sbjct: 476 RNSV 479
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 62/244 (25%), Positives = 99/244 (40%)
Query: 87 TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVS 146
TA D IR + S +L++T +D+LIR + ++ +R K L D S
Sbjct: 251 TASGDLYIR--SVCFSPDGKLLAT--GAEDKLIR-IWD---LSTKRIIKILRGHEQDIYS 302
Query: 147 -DLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGR 205
D + S S DRS +IW+ +C +++ + GS D
Sbjct: 303 LDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRT 361
Query: 206 IRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE- 264
+RVW+ S ER H +V ++A + +G + SG DR + +W E
Sbjct: 362 VRVWD-STTGFLVERLDSGNENGN--GHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEG 418
Query: 265 RDHRMVFAEALW-GHTGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGH 321
+ + E + GH +L C + + SGS DR V W + N + L+GH
Sbjct: 419 KSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNP---LLMLQGH 475
Query: 322 EKPV 325
V
Sbjct: 476 RNSV 479
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 40/167 (23%), Positives = 74/167 (44%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ +N +C+ + + + +
Sbjct: 103 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASA 162
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D ++VW+ V NK +H V H VN ++ + G+ L + D + +
Sbjct: 163 GSDQTVKVWDVRV---NK--LLQHYQV-----HSGGVNCISFHPSGNYLITASSDGTLKI 212
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ + R+++ L GHTG + + G+L ASG AD V +W+
Sbjct: 213 LDL-LEGRLIYT--LQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 256
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 82 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 134
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 184
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 305 QRGKENCYR 313
K C +
Sbjct: 242 DYSKGKCLK 250
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 82 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 134
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 184
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 305 QRGKENCYR 313
K C +
Sbjct: 242 DYSKGKCLK 250
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 82 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 134
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 184
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 305 QRGKENCYR 313
K C +
Sbjct: 242 DYSKGKCLK 250
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 82 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 134
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 184
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 305 QRGKENCYR 313
K C +
Sbjct: 242 DYSKGKCLK 250
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 123 (48.4 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ HK + W + S+L+V S S D++ KIW+ S+ KCL+++ K H
Sbjct: 82 TISGHKLGISDVAWSSDSNLLV------SASDDKTLKIWDVSSGKCLKTL-KGHSNYVFC 134
Query: 189 XXXX-XXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
+GS D +R+W+ V K K TL H V+A+ N DGS
Sbjct: 135 CNFNPQSNLIVSGSFDESVRIWD---VKTGKCLK-------TLPAHSDPVSAVHFNRDGS 184
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
L+ S D +W+ + + L + + G + + + D T+++W
Sbjct: 185 LIVSSSYDGLCRIWDTASGQCL---KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLW 241
Query: 305 QRGKENCYR 313
K C +
Sbjct: 242 DYSKGKCLK 250
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 111 (44.1 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 203 DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE 262
D +I++W S + H + ++ +TL H + V A A + DG +L SG D+ ++V++
Sbjct: 211 DCQIKIWVISFI-HILGFELKYK--STLTGHCAPVLACAFSHDGQMLVSGSVDKSVIVYD 267
Query: 263 RERDHRMVFAEALWGHTGALL-CLI--NVGDLLASGSADRTVRIWQRGKENCYRCMAFLE 319
++ + L HT + C N+ LLA+GS D+TV IWQ E C A +
Sbjct: 268 TNTENIL---HTLTQHTRYVTTCAFAPNIL-LLATGSMDKTVNIWQFDTETL--CQAKIP 321
Query: 320 GHEK 323
K
Sbjct: 322 DQPK 325
Score = 56 (24.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 8 SSEAFKHHCIASLKIPSPDPHHMIISC--LAVHNSLLYAASLNEINVFD-----LISDYS 60
+++++K H AS+K S +++C N + +S ++ V+D L S+ +
Sbjct: 125 NAQSYKLHRCASVKDGS------LVACAFFPPGNLFVTGSSCGDLTVWDDKMRCLHSEKA 178
Query: 61 H-VDTFSNDLSSS---GSVKSITFHITKIFTAHQDCKIRVWKIT 100
H + D SS G + + F ++ + QDC+I++W I+
Sbjct: 179 HDLGITCCDFSSQPVPGGERGLQFF--QLASCGQDCQIKIWVIS 220
Score = 45 (20.9 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 28 HHMIISCLAVHNSLLYAASLNEINVFDLISDYSHV 62
H+ ++C A +SLL +L++ +SD++ V
Sbjct: 11 HNDDVNCCAFSSSLLATCALDKTIRLYFLSDFTEV 45
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 40/167 (23%), Positives = 74/167 (44%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ +N +C+ + + + +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASA 204
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D ++VW+ V NK +H V H VN ++ + G+ L + D + +
Sbjct: 205 GSDQTVKVWDVRV---NK--LLQHYQV-----HSGGVNCISFHPSGNYLITASSDGTLKI 254
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ + R+++ L GHTG + + G+L ASG AD V +W+
Sbjct: 255 LDL-LEGRLIYT--LQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
>DICTYBASE|DDB_G0286735 [details] [associations]
symbol:DDB_G0286735 "C3HC4-type zinc
finger-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR008974 InterPro:IPR013323
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00184 SMART:SM00320 dictyBase:DDB_G0286735 Prosite:PS00518
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046872 GO:GO:0008270 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000089
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 SUPFAM:SSF49599 Gene3D:3.90.890.10 KO:K10646
RefSeq:XP_637649.1 ProteinModelPortal:Q54LB2
EnsemblProtists:DDB0187121 GeneID:8625789 KEGG:ddi:DDB_G0286735
InParanoid:Q54LB2 OMA:NTNIMIC ProtClustDB:CLSZ2430092
Uniprot:Q54LB2
Length = 694
Score = 127 (49.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 72/330 (21%), Positives = 136/330 (41%)
Query: 10 EAFKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLNEINVFDL-ISDYSHVDTFSND 68
E H ASL+ H + + N + ++L +++ DL I TF
Sbjct: 376 EGTMRHIQASLEATQ----HQLSETVYDLNIIKKNSNLESVDIVDLKIPQLKCKGTF--- 428
Query: 69 LSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYV 128
+ +G + +T + + D K+++W + + Q++S + L +V+ N
Sbjct: 429 VGHNGPIWCMTVTNGMLISGSSDMKVKIWDLVTLKCKQVLSGHEGIVHTL--AVIGNRLF 486
Query: 129 TVRRHKK-RLW-LEHWDAVS---D------LVVKQGLMYSVSWDRSFKIWNASNYKCLES 177
+ + R+W LE ++ +S D LV+ G ++S S+ K+W+ ++C+++
Sbjct: 487 SGSSDQTIRVWDLETFECLSVLRDDNTVCALVIAAGYLFSGSFQH-IKVWDLETFECVQT 545
Query: 178 VN-KAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236
+ +H Y+G A +RVW+ + N E V T+ +
Sbjct: 546 LKGNSH---WVRALTVSGGYLYSG-AYNVVRVWDLA----NFE------CVQTIPGGSGS 591
Query: 237 VNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGS 296
+ +LA++ L +G + IVVW + L GH GA+ L SGS
Sbjct: 592 IYSLAVSN--RRLLAGTYENTIVVWNLDT---FEIINKLEGHIGAVYTLAVSDKKFYSGS 646
Query: 297 ADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T+++W + C+ L H V+
Sbjct: 647 YDSTIKVWN----DSLVCVQTLNRHTSSVE 672
>FB|FBgn0053505 [details] [associations]
symbol:U3-55K "U3 small nuclear riboprotein factor 55K"
species:7227 "Drosophila melanogaster" [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0034511 HSSP:P16649
GeneTree:ENSGT00550000075093 KO:K14793 EMBL:AY118520
RefSeq:NP_001014529.1 UniGene:Dm.11010 SMR:Q8MSW9 STRING:Q8MSW9
EnsemblMetazoa:FBtr0091445 GeneID:3346176 KEGG:dme:Dmel_CG33505
UCSC:CG33505-RA CTD:3346176 FlyBase:FBgn0053505 InParanoid:Q8MSW9
OMA:AVGQEHK OrthoDB:EOG4TMPHB GenomeRNAi:3346176 NextBio:849159
Uniprot:Q8MSW9
Length = 484
Score = 125 (49.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 48/185 (25%), Positives = 83/185 (44%)
Query: 132 RHKKRLWLEHWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXX 189
+H K L H D+V+ LV ++G +YS + DRS KIW+ +ES+ H+
Sbjct: 247 KHIKTL-KGHRDSVAGLVFRKGTHDLYSAAKDRSVKIWSLDEMAYVESLF-GHQTAVTSI 304
Query: 190 XXXXXXXXYT-GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL 248
T G +D +R+W+ + + ++ L+ H+ ++ + D
Sbjct: 305 DALSRERAITAGGSDCSLRIWK--ITEESQ-------LIYN--GHKDSIECVKYINDEHF 353
Query: 249 LFSGGCDRWIVVWERERDHRMVFAEALWG--HTG------ALLCLINVGDLLASGSADRT 300
+ SGG D I +W + + + G G A+ ++N DL+A+GS D
Sbjct: 354 V-SGGMDGAIGLWSALKKKPICTTQLAHGVGENGVANWITAIAVVVNT-DLVATGSCDGC 411
Query: 301 VRIWQ 305
VR+WQ
Sbjct: 412 VRLWQ 416
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 122 (48.0 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 50/199 (25%), Positives = 84/199 (42%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIWN---ASNYKCL-ESVNKAHEXXXXXXXXXXX 194
H D V L V ++G ++ S + D+S +IW A C+ + H
Sbjct: 375 HTDIVLALDVFRKGWLFASCAKDQSIRIWRMNKAGQVACVAQGSGHTHSVGTICCSRLKE 434
Query: 195 XXXYTGSADGRIRVWERSVVDHNKERKSRHMLV-----TTLVKHRSTVNALALNGDGSLL 249
TGS D +++W +K S L+ +T H +N+LA++ + LL
Sbjct: 435 SFLVTGSQDCTVKLWPLPEALPSKNTASDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLL 494
Query: 250 FSGGCDRWIVVWERERDHRM-VFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIWQR 306
+G DR +W + + VF+ GH L + +LA+ SAD T+++W
Sbjct: 495 ATGSQDRTAKLWALPQCQLLGVFS----GHRRGLWNVQFSPTDQVLATASADGTIKLWAL 550
Query: 307 GKENCYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 551 QD---FSCLKTFEGHDASV 566
Score = 49 (22.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHI--TKI--FTAHQDCKIRVWKI 99
+ V+D++ Y F S G V + FH T++ F++ D IRVW +
Sbjct: 133 VRVWDIVQHYG-THHFRG---SPGVVHLVAFHPDPTRLLLFSSAVDTSIRVWSL 182
Score = 38 (18.4 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 25 PDPHHMIISCLAVHNSLLYAASLNEINVFDLISDYSHVDT--FSND---LSSSGSVK 76
PDP +++ AV S+ + + + L + YS V + FS D + SSG K
Sbjct: 161 PDPTRLLLFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDK 217
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 118 (46.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 43/182 (23%), Positives = 75/182 (41%)
Query: 129 TVRRHKKRLWL-EH--WDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXX 185
TV R K L +H W + L+ S S D++ K+W+ ++ +C+ S +
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA 191
Query: 186 XXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD 245
D ++VW D R +H V H + VN+L+ +
Sbjct: 192 NHVEFHPSGTCIAAAGTDKTVKVW-----DVRMNRLLQHYQV-----HTAAVNSLSFHPS 241
Query: 246 GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRI 303
G+ L + D + + + + R+++ L GH G C+ GD ASG +D V +
Sbjct: 242 GNYLITASNDSTLKILDL-LEGRLLYT--LHGHQGPATCVAFSRTGDFFASGGSDEQVMV 298
Query: 304 WQ 305
W+
Sbjct: 299 WK 300
Score = 112 (44.5 bits), Expect = 0.00084, P = 0.00084
Identities = 43/175 (24%), Positives = 68/175 (38%)
Query: 141 HWDAVS--DLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DA++ D + + + S S D KIW+ + +
Sbjct: 19 HRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVA 78
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+GS D + +W SV + T H +TV ++ + DG L + D+ I
Sbjct: 79 SGSRDKTVCLWVPSVKGES----------TVFKAHTATVRSVHFSSDGQSLVTASDDKTI 128
Query: 259 VVWERERDHRMVFAEALWGHTGALLC--LINVGDLLASGSADRTVRIWQRGKENC 311
VW HR F +L H + C G L+AS S D+TV++W + C
Sbjct: 129 KVWTV---HRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSREC 180
Score = 42 (19.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 72 SGSVKSITFHIT--KIFTAHQDCKIRVWKITASRQHQLVS 109
+ +V+S+ F + TA D I+VW T RQ L S
Sbjct: 104 TATVRSVHFSSDGQSLVTASDDKTIKVW--TVHRQKFLFS 141
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 126 (49.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 41/171 (23%), Positives = 68/171 (39%)
Query: 143 DAVSDLVVKQGLMYSV--SWDRSFKIWNASN---YKCLESVNKAHEXXXXXXXXXXXXXX 197
D V+ + + Y S D+S ++W+ + + LE + +
Sbjct: 430 DGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDL 489
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRH--MLVTTLVKHRSTVNALALNGDGSLLFSGGCD 255
TGS D I++WE + N + + V T HR V ++AL D + SG D
Sbjct: 490 VTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKD 549
Query: 256 RWIVVWERERDHRMVFAEALWGHTGALLCLIN--VGDLLASGSADRTVRIW 304
R + W+ + L GH +++ + G A+GS D RIW
Sbjct: 550 RGVQFWDPRTGSTQLM---LQGHKNSVISVAPSPTGGFFATGSGDMRARIW 597
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 122 (48.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 35/104 (33%), Positives = 48/104 (46%)
Query: 226 LVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW-GHTGAL-- 282
L+ L HR + G++L + G D+ I +W + R V L GH+ +
Sbjct: 6 LLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRD 65
Query: 283 LCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ G LAS S D TV IW + K + C A LEGHE VK
Sbjct: 66 VAWSPCGQYLASASFDATVAIWDK-KSGEFECNATLEGHENEVK 108
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00092
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLLFSGGCDRW 257
T D IR+W ++ R + T L H T+ +A + G L S D
Sbjct: 31 TCGEDKTIRIWA-------EDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASASFDAT 83
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCM 315
+ +W+++ A L GH + + G LLA+ S D++V +W+ +E+ Y C
Sbjct: 84 VAIWDKKSGEFECNA-TLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECA 142
Query: 316 AFLEGHEKPVK 326
A L H + VK
Sbjct: 143 AVLNTHTQDVK 153
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 44/150 (29%), Positives = 66/150 (44%)
Query: 157 SVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDH 216
S S DR+ +IW+ + L + TGS+D +R+W+ +
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGE- 535
Query: 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW 276
V + HRS V +LA++ DG + SG D I++W+ R + L
Sbjct: 536 ---------CVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA-RCI--TPLM 583
Query: 277 GHTGAL--LCLINVGDLLASGSADRTVRIW 304
GH + L G LLASGSAD TV++W
Sbjct: 584 GHNSCVWSLSYSGEGSLLASGSADCTVKLW 613
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 52/208 (25%), Positives = 84/208 (40%)
Query: 141 HWDAVSDLVVK-QG-LMYSVSWDRSFKIWN-ASNYKCLESVNKAHEXXXXXXXXXXXXXX 197
H D+V D+ QG L+ S S D S K+W+ +Y+C+++++
Sbjct: 149 HTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYV 208
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
+ S D I++WE + V T HR V + ++ +GS+ + D+
Sbjct: 209 LSASRDRTIKMWEVAT----------GYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQT 258
Query: 258 IVVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSAD 298
I VW ++ RDH W A + G LASGS D
Sbjct: 259 IRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRD 318
Query: 299 RTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+T+RIW + C+ L GH+ V+
Sbjct: 319 KTIRIWD---VSVGLCLLTLSGHDNWVR 343
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 126 (49.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 48/181 (26%), Positives = 75/181 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEXX 185
T+ K + + H VS LV+ + L+ + D IW S C+ S+
Sbjct: 7 TITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAV 66
Query: 186 XXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD 245
GS G +R+W+ ++ TL+ H++++++L +
Sbjct: 67 GCIQFNSSEERVVAGSLSGSLRLWDLEAAK----------ILRTLMGHKASISSLDFHPM 116
Query: 246 GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV--GDLLASGSADRTVRI 303
G L SG D I +W+ R VF GHT A+ CL G LAS S D TV++
Sbjct: 117 GEYLASGSVDSNIKLWDVRRKG-CVFRYK--GHTQAVRCLAFSPDGKWLASASDDSTVKL 173
Query: 304 W 304
W
Sbjct: 174 W 174
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 42/169 (24%), Positives = 74/169 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSW--DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H+DA+S L ++ D K+W+ ++ C+ + + +
Sbjct: 338 HYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLF 397
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW- 257
+ S DG +R W+ ++ + R T R + +A++ G ++ +G D +
Sbjct: 398 SSSLDGSVRAWD--LIRYRNFR-------TFTAPSRVQFSCIAVDPSGEIVCAGSQDSFE 448
Query: 258 IVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIW 304
I +W + + E L GH G + L + G LLASGS D+TVRIW
Sbjct: 449 IFMWSVQTGQLL---ETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIW 494
>TAIR|locus:2164456 [details] [associations]
symbol:AT5G40880 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000571 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00642 PROSITE:PS50082 PROSITE:PS50103
PROSITE:PS50294 SMART:SM00320 SMART:SM00356 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB011477 HOGENOM:HOG000239729 EMBL:BT030400 EMBL:AJ252065
IPI:IPI00524162 RefSeq:NP_198904.1 UniGene:At.25457
UniGene:At.30265 ProteinModelPortal:Q9FKR9 SMR:Q9FKR9 STRING:Q9FKR9
PRIDE:Q9FKR9 EnsemblPlants:AT5G40880.1 GeneID:834089
KEGG:ath:AT5G40880 GeneFarm:3785 TAIR:At5g40880 InParanoid:Q9FKR9
OMA:AALEGHK PhylomeDB:Q9FKR9 ProtClustDB:CLSN2686199
Genevestigator:Q9FKR9 Uniprot:Q9FKR9
Length = 472
Score = 103 (41.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 241 ALNGDGSLLFSGGCDRWIVVW---ERERDHRMVFAEALWGH-TGALLCLINVGDLLASGS 296
A+ +LF+G I+VW + E D + +L GH +G + C + G++L SGS
Sbjct: 271 AMTAANGMLFAGTSSGSILVWKATDSESDP-FKYLTSLEGHHSGEVTCFVVGGEVLYSGS 329
Query: 297 ADRTVRIWQRGKENCYRCMAFLEGH 321
D+T+++W N +C L+ H
Sbjct: 330 VDKTIKVWDL---NTLQCRMTLKQH 351
Score = 63 (27.2 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVN 179
H + + + + QG ++SVS D + IW+ ++ +C+ S+N
Sbjct: 186 HKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSIN 226
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 41/123 (33%), Positives = 51/123 (41%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
TGS D I++W+ +D + V TL H V AL D L SGG D I
Sbjct: 398 TGSYDTTIKIWK---IDSGE-------CVKTLTGHTKGVRALVF--DNQKLISGGLDSTI 445
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFL 318
VW H GH A++ + + SGSAD TVR+W CY L
Sbjct: 446 KVWNY---HTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRTCYT----L 498
Query: 319 EGH 321
GH
Sbjct: 499 RGH 501
>DICTYBASE|DDB_G0291231 [details] [associations]
symbol:mhkA "myosin heavy chain kinase A"
species:44689 "Dictyostelium discoideum" [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0051764 "actin crosslink
formation" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=IDA] [GO:0051017 "actin filament bundle assembly"
evidence=IDA] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0031037 "myosin II filament disassembly"
evidence=IDA;IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0045159 "myosin II binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA;IC] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA;IDA] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;IDA] [GO:0046777 "protein
autophosphorylation" evidence=IDA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004166
InterPro:IPR011009 InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320
SMART:SM00811 dictyBase:DDB_G0291231 GO:GO:0005524 GO:GO:0005938
EMBL:AAFI02000177 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0051015 GO:GO:0046777 GO:GO:0016887 GO:GO:0051017
GO:GO:0000910 GO:GO:0051764 GO:GO:0018107 BRENDA:2.7.11.7
GO:GO:0031037 EMBL:U16856 PIR:A55532 RefSeq:XP_635119.1 PDB:3LKM
PDB:3LLA PDB:3LMH PDB:3LMI PDB:3PDT PDBsum:3LKM PDBsum:3LLA
PDBsum:3LMH PDBsum:3LMI PDBsum:3PDT ProteinModelPortal:P42527
EnsemblProtists:DDB0216274 GeneID:8628066 KEGG:ddi:DDB_G0291231
OMA:NEQVERV ProtClustDB:CLSZ2429540 EvolutionaryTrace:P42527
GO:GO:0016905 Uniprot:P42527
Length = 1146
Score = 128 (50.1 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 49/195 (25%), Positives = 85/195 (43%)
Query: 32 ISCLAVHNSLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQ 90
++C+ + L++ S ++ I V+DL S + + +F + +K++ +F+
Sbjct: 957 VNCVVANEKYLFSCSYDKTIKVWDL-STFKEIKSFEG--VHTKYIKTLALSGRYLFSGGN 1013
Query: 91 DCKIRVWKI-TASRQ-------------HQLVSTL-PTVKDRLIRSVLPNNYVTVRRHKK 135
D I VW T S H S L T KD +I+ +N+ + K
Sbjct: 1014 DQIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKG 1073
Query: 136 RLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXX 195
HW++VS VVK +YS S D S K+W+ +C+ ++ K+H
Sbjct: 1074 -----HWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLECVYTIPKSHSLGVKCLMVFNNQ 1128
Query: 196 XXYTGSADGRIRVWE 210
+ + DG I+VWE
Sbjct: 1129 II-SAAFDGSIKVWE 1142
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 40/171 (23%), Positives = 70/171 (40%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H V+ +V + ++S S+D++ K+W+ S +K ++S H ++G
Sbjct: 953 HTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVH-TKYIKTLALSGRYLFSG 1011
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
D I VW+ + ML + H V L+L+ S LFS D I +
Sbjct: 1012 GNDQIIYVWDTETLS---------MLFN-MQGHEDWV--LSLHCTASYLFSTSKDNVIKI 1059
Query: 261 WERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENC 311
W+ + L GH ++ + L SGS D ++++W C
Sbjct: 1060 WDLSN---FSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKVWDLDTLEC 1107
>UNIPROTKB|Q32SG6 [details] [associations]
symbol:Q32SG6 "Protein HIRA" species:4577 "Zea mays"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011494 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07569 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006351
GO:GO:0016568 KO:K11293 EMBL:AY940678 RefSeq:NP_001105835.1
UniGene:Zm.22931 ProteinModelPortal:Q32SG6 IntAct:Q32SG6
GeneID:732736 KEGG:zma:732736 Gramene:Q32SG6 Uniprot:Q32SG6
Length = 964
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 49/145 (33%), Positives = 63/145 (43%)
Query: 199 TGSADGRIRVWE-RSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
TG D ++R+W SV N S+ L+ TL H +VN + G L SG D+
Sbjct: 30 TGGGDQKVRIWSMESVHKDNTNNDSKQRLLATLRDHFGSVNCVRWAKHGRYLASGSDDQV 89
Query: 258 IVVWERERDH-RMVF-------AE-----ALW-GHTGALLCLINVGD--LLASGSADRTV 301
I++ ER+ F AE W GHT ++ L D LASGS D T+
Sbjct: 90 ILIHERKAGSGTSEFGSGEPPDAENWKVIMTWRGHTADVVDLSWSPDDSTLASGSLDNTI 149
Query: 302 RIWQRGKENCYRCMAFLEGHEKPVK 326
IW N C A L GH VK
Sbjct: 150 HIWNM---NNGICTAVLRGHTSLVK 171
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 109 (43.4 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 203 DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE 262
D +I++W S + H + ++ +TL H + V A A + DG +L SG D+ ++V++
Sbjct: 211 DCQIKIWVISFI-HILGFELKYK--STLTGHCAPVLACAFSHDGQMLVSGSVDKSVIVYD 267
Query: 263 RERDHRMVFAEALWGHTGALL-CLI--NVGDLLASGSADRTVRIWQ 305
++ + L HT + C N+ LLA+GS D+TV IWQ
Sbjct: 268 TNTENIL---HTLTQHTRYVTTCAFAPNIL-LLATGSMDKTVNIWQ 309
Score = 56 (24.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 25/104 (24%), Positives = 51/104 (49%)
Query: 8 SSEAFKHHCIASLKIPSPDPHHMIISC--LAVHNSLLYAASLNEINVFD-----LISDYS 60
+++++K H AS+K S +++C N + +S ++ V+D L S+ +
Sbjct: 125 NAQSYKLHRCASVKDGS------LVACAFFPPGNLFVTGSSCGDLTVWDDKMRCLHSEKA 178
Query: 61 H-VDTFSNDLSSS---GSVKSITFHITKIFTAHQDCKIRVWKIT 100
H + D SS G + + F ++ + QDC+I++W I+
Sbjct: 179 HDLGITCCDFSSQPVPGGERGLQFF--QLASCGQDCQIKIWVIS 220
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 62/274 (22%), Positives = 112/274 (40%)
Query: 65 FSNDLSSSGSVKSITFHITKIFT--AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSV 122
++ + +G++ + H +IF H DCK + + ++ ++ T I S
Sbjct: 57 YTMKFNPAGTLIASGSHDREIFLWRVHGDCKN--FMVLKGHKNAILDLHWTSDGSQIVSA 114
Query: 123 LPNNYVT---VRRHKK-RLWLEHWDAVSDLV-VKQG--LMYSVSWDRSFKIWNASNYKCL 175
P+ V V K+ + EH V+ ++G L+ S S D + K+W+ +
Sbjct: 115 SPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAI 174
Query: 176 ESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRS 235
++ ++ +TG D ++VW+ RK + TL H+
Sbjct: 175 QTFPDKYQITAVSFSDAADKI-FTGGVDNDVKVWDL--------RKGEATM--TLEGHQD 223
Query: 236 TVNALALNGDGSLLFSGGCDRWIVVWE-RERDHRMVFAEALWGHT-----GALLCLINV- 288
T+ ++L+ DGS L + G D + VW+ R + + GH L C +
Sbjct: 224 TITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPD 283
Query: 289 GDLLASGSADRTVRIWQR-GKENCYRCMAFLEGH 321
G + +GS+DR V IW + Y+ L GH
Sbjct: 284 GTKVTAGSSDRMVHIWDTTSRRTIYK----LPGH 313
>TAIR|locus:4515102561 [details] [associations]
symbol:AT1G21651 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF13639 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 EMBL:CP002684
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016772 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q04724
EMBL:AY065404 EMBL:AY096502 EMBL:AK229742 IPI:IPI00517824
RefSeq:NP_001117325.1 UniGene:At.47967 ProteinModelPortal:Q8VZ06
SMR:Q8VZ06 PaxDb:Q8VZ06 PRIDE:Q8VZ06 EnsemblPlants:AT1G21651.1
GeneID:6241299 KEGG:ath:AT1G21651 TAIR:At1g21651 PhylomeDB:Q8VZ06
ProtClustDB:CLSN2708440 ArrayExpress:Q8VZ06 Genevestigator:Q8VZ06
Uniprot:Q8VZ06
Length = 811
Score = 126 (49.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 45/166 (27%), Positives = 75/166 (45%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H D+V+ L V G ++S S+DR+ IW+ ++ + + K H+
Sbjct: 523 HQDSVTGLAVGGGFLFSSSYDRTILIWSLKDFSHVHTF-KGHQDKVMALIHIEGTEPVCV 581
Query: 201 SADGR--IRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
S DG I VW S +E+ R ++ ++ALA + G + ++G D I
Sbjct: 582 SGDGGGGIFVW--STTFPLEEQPLRKWYEPKDWRYTG-IHALAYSEYGHV-YTGSGDNTI 637
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304
W + D ++ + GH + L+ V +L SGS D TVR+W
Sbjct: 638 KAWSLQ-DGSLLCTMS--GHKSVVSTLVVVNGVLYSGSWDGTVRLW 680
Score = 108 (43.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 41/172 (23%), Positives = 74/172 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H VS LVV G++YS SWD + ++W+ S+ L + +
Sbjct: 654 HKSVVSTLVVVNGVLYSGSWDGTVRLWSLSDNSLLTVLGEETPGIVRSILSLAADDQTLV 713
Query: 201 SA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+A +G I++W L+ ++ + ++A+NG LF+GG D+ I
Sbjct: 714 AAYQNGDIQIWRDDT------------LMKSMKIQNGAILSIAVNG--KWLFTGGWDKTI 759
Query: 259 VVWERERDHRMVFAEALWGHTGA--LLCLINVGDLLASGSADRTVRIWQRGK 308
V E D V + G+ + L+ L +G AD+T++++ G+
Sbjct: 760 NVQELSGDEISVNCAHVGSIPGSSVITSLLYWEGKLFAGFADKTIKVYYFGR 811
Score = 57 (25.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 21 KIPSPDP--HHMIISCLAVHNSLLYAASLNEINVFDLISDYSHVDTF 65
K+ S D H ++ LAV L+++S + + + D+SHV TF
Sbjct: 514 KVRSKDMRGHQDSVTGLAVGGGFLFSSSYDRTILIWSLKDFSHVHTF 560
>POMBASE|SPAC4D7.05 [details] [associations]
symbol:sum1 "translation initiation factor eIF3i"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006413 "translational
initiation" evidence=IMP] [GO:0016282 "eukaryotic 43S preinitiation
complex" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation initiation
factor 3 complex, eIF3m" evidence=IDA] [GO:0003743 "translation
initiation factor activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC4D7.05 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0071470 GO:GO:0003743 GO:GO:0034399 GO:GO:0065007
GO:GO:0002183 GO:GO:0016282 GO:GO:0071540 GO:GO:0071541
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 OMA:ATVAGWS
OrthoDB:EOG44QX8Q EMBL:Y09529 EMBL:D89187 PIR:T38796 PIR:T42745
PIR:T46558 RefSeq:NP_594958.1 ProteinModelPortal:P79083
STRING:P79083 PRIDE:P79083 EnsemblFungi:SPAC4D7.05.1 GeneID:2543537
KEGG:spo:SPAC4D7.05 NextBio:20804546 Uniprot:P79083
Length = 328
Score = 120 (47.3 bits), Expect = 0.00011, P = 0.00011
Identities = 32/81 (39%), Positives = 43/81 (53%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL-LCLINVGD- 290
H + + N DG LLFS D+ I VW R+ E GHTGA+ C IN
Sbjct: 9 HERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYE---GHTGAIWTCDINKSST 65
Query: 291 LLASGSADRTVRIW--QRGKE 309
L+ SG+AD T+R+W + GK+
Sbjct: 66 LMVSGAADNTMRLWDVKTGKQ 86
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 51/203 (25%), Positives = 81/203 (39%)
Query: 128 VTVRRHKKRLWLEHWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
VT K + + H VS LV+ + L+ + D +W+ + C+ S+
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 185 XXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244
GS G IRVW+ ++ TL+ H++ + +L +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAK----------ILRTLMGHKANICSLDFHP 115
Query: 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVR 302
G + SG D I +W+ R VF GH+ A+ CL G LAS + D TV+
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKG-CVFRYR--GHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
+W + M+ GH PV
Sbjct: 173 LWDL---TAGKMMSEFPGHTGPV 192
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T++ H ++ +++ S LVV S S+D S +IW+ C++++ +
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVV------SGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV 219
Query: 189 XXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST-VNALALNGDGS 247
+GS DG +R+W+ + N + + TLV + V + + +G
Sbjct: 220 SFNRDGSLIASGSYDGLVRIWDTA----NGQ------CIKTLVDDENPPVAFVKFSPNGK 269
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL-----INVGDLLASGSADRTVR 302
+ + D + +W+ + + + GH + C+ + G + SGS D +
Sbjct: 270 YILASNLDSTLKLWDFSKGKTL---KQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
IW +C LEGH +PV
Sbjct: 327 IWNLQTREIVQC---LEGHTQPV 346
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 44/203 (21%), Positives = 85/203 (41%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T++ H ++ +++ S LVV S S+D S +IW+ C++++ +
Sbjct: 166 TLKGHNNYVFCCNFNPQSSLVV------SGSFDESVRIWDVKTGMCIKTLPAHSDPVSAV 219
Query: 189 XXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST-VNALALNGDGS 247
+GS DG +R+W+ + N + + TLV + V + + +G
Sbjct: 220 SFNRDGSLIASGSYDGLVRIWDTA----NGQ------CIKTLVDDENPPVAFVKFSPNGK 269
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL-----INVGDLLASGSADRTVR 302
+ + D + +W+ + + + GH + C+ + G + SGS D +
Sbjct: 270 YILASNLDSTLKLWDFSKGKTL---KQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIY 326
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
IW +C LEGH +PV
Sbjct: 327 IWNLQTREIVQC---LEGHTQPV 346
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 37/130 (28%), Positives = 56/130 (43%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
T D IR+W KE S H+ TV +A + G L S D
Sbjct: 33 TCGGDRAIRIW-------GKEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASASFDATT 85
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINV--GDLLASGSADRTVRIWQRGKENCYRCMA 316
+W++ D L GH + C+ G LLA+ S D++V IW+ +E+ Y C++
Sbjct: 86 CIWKKT-DEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDEYECLS 144
Query: 317 FLEGHEKPVK 326
+ H + VK
Sbjct: 145 VVNSHTQDVK 154
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 114 (45.2 bits), Expect = 0.00016, P = 0.00016
Identities = 48/190 (25%), Positives = 76/190 (40%)
Query: 141 HWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXX 197
H VS LV+ + L+ + D +W+ + C+ S+
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 82
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
GS G IRVW+ ++ TL+ H++ + +L + G + SG D
Sbjct: 83 VAGSQSGSIRVWDLEAAK----------ILRTLMGHKANICSLDFHPYGEFVASGSQDTN 132
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQRGKENCYRCM 315
I +W+ R VF GH+ A+ CL G LAS + D TV++W + M
Sbjct: 133 IKLWDIRRKG-CVFRYR--GHSQAVRCLRFSPDGKWLASAADDHTVKLWDL---TAGKMM 186
Query: 316 AFLEGHEKPV 325
+ GH PV
Sbjct: 187 SEFPGHTGPV 196
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 49/207 (23%), Positives = 82/207 (39%)
Query: 141 HWDAVSDLVVKQ-G-LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ G L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE + V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVAT----------GYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W A ++ G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSIGMCLMTLVGHDNWVR 342
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 119 (46.9 bits), Expect = 0.00017, P = 0.00017
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ SAD I++W D E+ T+ H+ ++ +A + D LL SG D+ +
Sbjct: 89 SSSADKLIKIW--GAYDGKFEK--------TISGHKLGISDVAWSSDSRLLVSGSDDKTL 138
Query: 259 VVWERERDHRMVFAEALWGHTGALLCL-INV-GDLLASGSADRTVRIWQRGKENCYRCMA 316
VWE + + L GH+ + C N +L+ SGS D +VRIW +C+
Sbjct: 139 KVWELSTGKSL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD---VRTGKCLK 192
Query: 317 FLEGHEKPV 325
L H PV
Sbjct: 193 TLPAHSDPV 201
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 118 (46.6 bits), Expect = 0.00017, P = 0.00017
Identities = 41/181 (22%), Positives = 72/181 (39%)
Query: 151 KQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSA-DGRIRVW 209
+ ++ S S+D + +IW+ + KCL+ V AH S+ DG R+W
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLK-VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 210 ERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM 269
+ + H + T + V+ + + +G + G D + +W
Sbjct: 183 DSG---------TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK-- 231
Query: 270 VFAEALWGHTGALLCL-----INVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKP 324
F + GH A C+ + G + SGS D V +W+ N + + LEGH +
Sbjct: 232 -FLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWEL---NSKKLLQKLEGHTET 287
Query: 325 V 325
V
Sbjct: 288 V 288
>TAIR|locus:2115984 [details] [associations]
symbol:YAO "AT4G05410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0000266 "mitochondrial fission" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0005680
"anaphase-promoting complex" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0060321 "acceptance of pollen" evidence=IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009793 EMBL:AL161503 GO:GO:0009553 HSSP:P16649 GO:GO:0080008
HOGENOM:HOG000188732 KO:K14793 OMA:AVGQEHK ProtClustDB:CLSN2685798
EMBL:AY099817 EMBL:BT000325 IPI:IPI00530808 PIR:A85068
RefSeq:NP_192450.1 UniGene:At.27619 UniGene:At.33853
ProteinModelPortal:Q9M0V4 SMR:Q9M0V4 STRING:Q9M0V4 PaxDb:Q9M0V4
PRIDE:Q9M0V4 EnsemblPlants:AT4G05410.1 GeneID:825889
KEGG:ath:AT4G05410 TAIR:At4g05410 InParanoid:Q9M0V4
PhylomeDB:Q9M0V4 Genevestigator:Q9M0V4 GO:GO:0060321 Uniprot:Q9M0V4
Length = 504
Score = 121 (47.7 bits), Expect = 0.00017, P = 0.00017
Identities = 41/119 (34%), Positives = 58/119 (48%)
Query: 198 YTGSADGRIRVWERSVVDHNKER-KSRHMLVTTLVKHRSTVN--------ALALNGDGSL 248
++ S DG I W+ S +K S +L + +K R N ALA++ DG
Sbjct: 177 FSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRY 236
Query: 249 LFSGGCDRWIVVWE-RERDHRMVFAEALWGHTGALLCL-INVGDL-LASGSADRTVRIW 304
L +GG DR + +W+ R R+H F GH + CL G L SGS DRTV++W
Sbjct: 237 LATGGVDRHVHIWDVRTREHVQAFP----GHRNTVSCLCFRYGTSELYSGSFDRTVKVW 291
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 122 (48.0 bits), Expect = 0.00017, P = 0.00017
Identities = 61/240 (25%), Positives = 99/240 (41%)
Query: 92 CKIRV-WKITASRQHQLVSTLPTVKD-RLIRSVLPN-NY-VTVR-----RHKKRLWLE-H 141
C++ W+ RQ L V +L+R++L + +Y T+R ++ LE H
Sbjct: 253 CRVECNWRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGH 312
Query: 142 WDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGS 201
V+ L Q + S S D++ +IWN +C+ S+ H +GS
Sbjct: 313 SSGVTCLQFDQCKLISGSMDKTIRIWNYRTSECI-SILHGH-TDSVLCLTFDSTLLVSGS 370
Query: 202 ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVW 261
AD +++W S +R TL H VN++ + D L+ SG D I +W
Sbjct: 371 ADCTVKLWHFS----GGKR-------ITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIW 419
Query: 262 ERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCM-AFLEG 320
E + + A H G + L L S S D T++ W K+ C + +EG
Sbjct: 420 SLETNTCLHTFSA---HIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEG 476
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 44/129 (34%), Positives = 54/129 (41%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+GS D IR+W + V L H S V L D L SG D+ I
Sbjct: 288 SGSYDATIRLWNLATFQQ----------VALLEGHSSGVTCLQF--DQCKLISGSMDKTI 335
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQ--RGKENCYRCMA 316
+W R + L GHT ++LCL LL SGSAD TV++W GK
Sbjct: 336 RIWNY-RTSECI--SILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKR------I 386
Query: 317 FLEGHEKPV 325
L GH PV
Sbjct: 387 TLRGHTGPV 395
>UNIPROTKB|F1Q065 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AAEX03004635 Ensembl:ENSCAFT00000030902 Uniprot:F1Q065
Length = 803
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/199 (24%), Positives = 84/199 (42%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIWN---ASNYKCL-ESVNKAHEXXXXXXXXXXX 194
H D V L V ++G ++ S + D+S IW A C+ + H
Sbjct: 372 HTDIVLALDVFRKGRLFASCAKDQSICIWRMNKAGRVACVAQGSGHTHSVGTICCSRLKE 431
Query: 195 XXXYTGSADGRIRVWE--RSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLL 249
TGS D +++W +++ S +L+ T H +N++A+ + LL
Sbjct: 432 TFLVTGSQDCTVKLWPIPEALLSKGTAPDSGPILLQAQATQRCHDKDINSVAVAPNDKLL 491
Query: 250 FSGGCDRWIVVWERERDHRM-VFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQR 306
+G DR +W + +F+ GH L C+ + +LA+ SAD T+++W
Sbjct: 492 ATGSQDRTAKLWALPHCQLLGIFS----GHRRGLWCVQFSPMDQVLATASADGTIKLWAL 547
Query: 307 GKENCYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 548 QD---FSCLKTFEGHDASV 563
Score = 49 (22.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK----IFTAHQDCKIRVWKI 99
+ V+D++ Y F S G V +TFH +F++ D IR+W +
Sbjct: 130 VRVWDIVRHYG-THHFRG---SPGVVHLVTFHPDPARLLLFSSAADATIRMWSL 179
>FB|FBgn0038597 [details] [associations]
symbol:CG8064 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0022008
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD EMBL:AY047497
RefSeq:NP_650705.1 UniGene:Dm.4684 SMR:Q9VE98 MINT:MINT-1586038
STRING:Q9VE98 EnsemblMetazoa:FBtr0083574 GeneID:42196
KEGG:dme:Dmel_CG8064 UCSC:CG8064-RA FlyBase:FBgn0038597
InParanoid:Q9VE98 OrthoDB:EOG4KWH7Q ChiTaRS:CG8064 GenomeRNAi:42196
NextBio:827621 Uniprot:Q9VE98
Length = 922
Score = 120 (47.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 35/120 (29%), Positives = 61/120 (50%)
Query: 199 TGSADGRIRVWERSVVDHNK---ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD 255
TGS D +++W ++D + + K +L +K TV LA++ D L G D
Sbjct: 501 TGSGDTTVKIWTFELIDAGEGAAQTKVLSLLHKNTLKLEETVLCLAVSPDMKYLAVGLLD 560
Query: 256 RWIVVWERERDHRMVFAEALWGHTGALLCL-INV-GDLLASGSADRTVRIWQRGKENCYR 313
+ V+ + F +L+GH ++CL I+ +L+ +GSADR V++W +C+R
Sbjct: 561 ATVKVFFLDT---FKFYLSLYGHKLPVICLDISYDSNLIVTGSADRNVKVWGLNFGDCHR 617
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 149 VVKQGLMYSVSWDRSFKIWNASNYKCLESV 178
+V + ++ S S D K WN C +++
Sbjct: 164 LVDESIVVSCSKDTQIKFWNLETQFCFKTI 193
Score = 42 (19.8 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 163 SFKIWNASNYKCLESV 178
SFK W+ +CL +V
Sbjct: 425 SFKFWDRDAMQCLRTV 440
>DICTYBASE|DDB_G0282489 [details] [associations]
symbol:mhkD "putative myosin heavy chain kinase D"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0016905 "myosin heavy chain
kinase activity" evidence=IEA;ISS] [GO:0006468 "protein
phosphorylation" evidence=IEA;ISS] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA;ISS] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR004166 InterPro:IPR011009
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51158 SMART:SM00320 SMART:SM00811
dictyBase:DDB_G0282489 GO:GO:0005524 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000047 GenomeReviews:CM000152_GR SUPFAM:SSF56112
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:Q923J1
GO:GO:0031037 ProtClustDB:CLSZ2429540 GO:GO:0016905
RefSeq:XP_640080.1 ProteinModelPortal:Q54SF9
EnsemblProtists:DDB0220109 GeneID:8623609 KEGG:ddi:DDB_G0282489
OMA:FRAHRRS Uniprot:Q54SF9
Length = 941
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 141 HWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVN-----KAHEXXXXXXXXXX 193
H + V L++ Q +YS S D KIWN +N + L + +AH
Sbjct: 636 HDERVCSLLINQDKTKLYSASADGYVKIWNLTNNEDLSKIQMIDSFRAHRRSIEKMLLNE 695
Query: 194 XXXXYTGSADGRIRVWE----RSVVDHNKERKSR----HMLVTTLVKHRSTVNALALNGD 245
+T S+DG I++W + +K+ S + + L H + VN + ++ +
Sbjct: 696 KYL-FTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGKLEDHTAEVNDMCIDIE 754
Query: 246 GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQ 305
+ L S D+ I +++ + + ++L H ++ + G L S S D++++IW
Sbjct: 755 NNFLVSCSFDKQIKIYDLST-FKCI--KSLNAHGKSIKSIYMSGKYLFSSSNDQSIKIWD 811
Query: 306 RGKENCYRCMAFLEGHEKPV 325
E C + H+ P+
Sbjct: 812 L--EMCMCVYGMNDAHDAPI 829
>SGD|S000001885 [details] [associations]
symbol:CDC4 "F-box protein required for G1/S and G2/M
transition" species:4932 "Saccharomyces cerevisiae" [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IGI;IMP]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043224 "nuclear SCF
ubiquitin ligase complex" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA;IPI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IDA] [GO:0007126 "meiosis" evidence=IMP] [GO:0051301 "cell
division" evidence=IEA] [GO:0030435 "sporulation resulting in
formation of a cellular spore" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 SGD:S000001885 GO:GO:0007126 GO:GO:0000086
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0000082 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:D50617 EMBL:BK006940
SUPFAM:SSF81383 GO:GO:0030435 GO:GO:0016363 GO:GO:0042787
GO:GO:0043130 EMBL:Z46255 GeneTree:ENSGT00550000075528
GO:GO:0031146 EMBL:X05625 PIR:S56245 RefSeq:NP_116585.1 PDB:1NEX
PDB:2P63 PDB:3MKS PDB:3V7D PDBsum:1NEX PDBsum:2P63 PDBsum:3MKS
PDBsum:3V7D ProteinModelPortal:P07834 SMR:P07834 DIP:DIP-1625N
IntAct:P07834 MINT:MINT-389524 STRING:P07834 PaxDb:P07834
PRIDE:P07834 EnsemblFungi:YFL009W GeneID:850539 KEGG:sce:YFL009W
CYGD:YFL009w HOGENOM:HOG000111495 KO:K03361 OMA:VVTCLQH
OrthoDB:EOG4B2X5M EvolutionaryTrace:P07834 NextBio:966298
Genevestigator:P07834 GermOnline:YFL009W GO:GO:0043224
Uniprot:P07834
Length = 779
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 47/170 (27%), Positives = 70/170 (41%)
Query: 153 GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXX-XXXXXXXXXXY--TGSADGRIRVW 209
G++ S S DR+ ++W+ C V K H Y TGS D + VW
Sbjct: 434 GILVSGSTDRTVRVWDIKK-GCCTHVFKGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 492
Query: 210 ----ERSVVDHNKER---------KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR 256
E SV DH +E + V L H ++V ++ G G+++ SG D
Sbjct: 493 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHGNIVVSGSYDN 550
Query: 257 WIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIW 304
++VW+ + M L GHT + I + S S D T+RIW
Sbjct: 551 TLIVWDVAQ---MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 597
>DICTYBASE|DDB_G0290687 [details] [associations]
symbol:mhkC "myosin heavy chain kinase C"
species:44689 "Dictyostelium discoideum" [GO:0031037 "myosin II
filament disassembly" evidence=IMP] [GO:0005826 "actomyosin
contractile ring" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISS] [GO:0005938 "cell cortex" evidence=IEA;IDA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;ISS;IDA] [GO:0018107 "peptidyl-threonine
phosphorylation" evidence=IDA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0045159 "myosin II
binding" evidence=ISS] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0032154 "cleavage furrow"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0290687
GO:GO:0005524 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
GO:GO:0000910 GO:GO:0005826 GO:GO:0018107 GO:GO:0032154 HSSP:P16649
BRENDA:2.7.11.7 EMBL:AAFI02000166 GO:GO:0031037 GO:GO:0045159
GO:GO:0016905 ProtClustDB:CLSZ2846619 EMBL:AB079663 EMBL:AF079447
RefSeq:XP_635600.1 ProteinModelPortal:Q8MY12
EnsemblProtists:DDB0216199 GeneID:8627781 KEGG:ddi:DDB_G0290687
OMA:NTRSSIL Uniprot:Q8MY12
Length = 780
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 71/295 (24%), Positives = 121/295 (41%)
Query: 48 NEINVFDLISDYSHVDTFSNDLSSSGSVKS-----ITFHITKIFTAHQDCKIRVWKITAS 102
N N + S+ S V + S+ SSS S + I+ +++ Q I+ AS
Sbjct: 408 NSSNSSSVNSNSSSVSSSSSSSSSSSSSSTTNAAPISIQVSRNSPPPQQ-PIQPSSAAAS 466
Query: 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLW----LEHWDAV----SDLVVKQGL 154
S +PT + S+ T R + W +++ D V S+ + L
Sbjct: 467 ASSTSSSNVPTPESTSTSSMEQ----TPDRSEFEKWDLTSIKNIDTVRGLQSECITGDSL 522
Query: 155 -MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXX--XXXXXYTGSADGRIRVWER 211
+YS S D +W+A K + ++ KAH T AD ++ W+
Sbjct: 523 RLYSGSNDGQIGVWDAVELKHVTNI-KAHGKSIRAVIKRPGFDQNILTAGADSLVKEWDI 581
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF 271
+ KE +K + VN + + + LL++G D+ + VW+ R + V
Sbjct: 582 NTQQTIKE-----------IKESNEVNTIFIQDN--LLYTGCNDKTVKVWDM-RSYECV- 626
Query: 272 AEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
+ L GHT A+ + +G+LL SGS D+ + +W + +GHE VK
Sbjct: 627 -KTLSGHTRAIKSVCAMGNLLFSGSNDQQIYVWNLATGTI---LTNFQGHEGWVK 677
>UNIPROTKB|Q148I1 [details] [associations]
symbol:PAAF1 "Proteasomal ATPase-associated factor 1"
species:9913 "Bos taurus" [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000502 EMBL:BC118307 IPI:IPI00691381 RefSeq:NP_001069458.1
UniGene:Bt.17989 ProteinModelPortal:Q148I1 STRING:Q148I1
PRIDE:Q148I1 Ensembl:ENSBTAT00000004794 GeneID:533348
KEGG:bta:533348 CTD:80227 GeneTree:ENSGT00390000005948
HOGENOM:HOG000006858 HOVERGEN:HBG056033 InParanoid:Q148I1 KO:K11887
OMA:HPPGKPS OrthoDB:EOG41VK31 NextBio:20876009 ArrayExpress:Q148I1
Uniprot:Q148I1
Length = 392
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 37/120 (30%), Positives = 54/120 (45%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ SADG +++W+ S N E L L H VN G ++ SGG D +
Sbjct: 109 SSSADGSMKIWQAS----NGE------LRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQL 158
Query: 259 VVWERERDHRMVFAEALWGHTGALL--CLINVGDLLASGSADRTVRIWQRGKENCYRCMA 316
+W E D V GH G +L +++ G + SGS D T R+W G+ C +A
Sbjct: 159 KIWSAE-DASCVVT--FKGHKGGILDTAIVDRGKNVVSGSRDGTARLWDCGRSACLGVIA 215
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 38/110 (34%), Positives = 56/110 (50%)
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
+TGS+D R+W+ V N V + H ++VN LA++ DG L SGG D
Sbjct: 617 FTGSSDKTCRMWD--VHTGN--------CVRVFLGHTNSVNCLAVSPDGRWLASGGEDGI 666
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGSADRTVRIW 304
I VW+ R+ +++ GH A L + G +L SG AD +VR+W
Sbjct: 667 ICVWDIGSGRRL---KSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVW 713
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 116 (45.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 50/195 (25%), Positives = 89/195 (45%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D V L V ++G ++ S + D+S +IW +NKA +
Sbjct: 283 HTDIVLALDVFRKGWLFASCAKDQSVRIWR---------MNKAGQVMLKESFLV------ 327
Query: 199 TGSADGRIRVWE--RSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLLFSGG 253
TGS D +++W ++++ N + +L+ TT H +N++A+ + LL +G
Sbjct: 328 TGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQRCHDKDINSVAIAPNDKLLATGS 387
Query: 254 CDRWIVVWERERDHRM-VFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQRGKEN 310
DR +W + + VF+ GH L C+ + +LA+ SAD T+++W
Sbjct: 388 QDRTAKLWALPQCQLLGVFS----GHRRGLWCVQFSPMDQVLATASADGTIKLWALQD-- 441
Query: 311 CYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 442 -FSCLKTFEGHDASV 455
Score = 49 (22.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHI--TKI--FTAHQDCKIRVWKI 99
+ V+D++ Y F S G V + FH T++ F++ D IRVW +
Sbjct: 41 VRVWDIVRHYG-THHFRG---SPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSL 90
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 38/167 (22%), Positives = 71/167 (42%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ ++ +C+ + + + +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASA 204
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D +R+W D R +H V H VN L+ + G+ L + D + +
Sbjct: 205 GSDHAVRIW-----DIRMNRLLQHYQV-----HSCGVNCLSFHPSGNSLVTASSDGTVKI 254
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ + R+++ L GHTG + + G+L SG AD V +W+
Sbjct: 255 LDLV-EGRLIYT--LQGHTGPVFTVSFSKDGELFTSGGADAQVLVWR 298
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
Identities = 39/131 (29%), Positives = 56/131 (42%)
Query: 199 TGSADGRIRVWERSVVDHNKERKS-RHMLVT--TLVKHRSTVNALALNGDGSLLFSGGCD 255
+GS D R+W+ S + N + RH + V V +L N DGSLL +G D
Sbjct: 372 SGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYD 431
Query: 256 RWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYR 313
+ +W+ D R+ A L H G + L G+ + S D+T IW C +
Sbjct: 432 GYARIWKT--DGRL--ASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQ 487
Query: 314 CMAFLEGHEKP 324
AF H P
Sbjct: 488 QFAF---HSAP 495
Score = 117 (46.2 bits), Expect = 0.00076, P = 0.00076
Identities = 54/207 (26%), Positives = 79/207 (38%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXX 188
T+ +HK ++ W+ + ++ G+ D++ IW+AS +C + H
Sbjct: 446 TLGQHKGPIFALKWNKCGNYILSAGV------DKTTIIWDASTGQCTQQF-AFHSAPALD 498
Query: 189 XXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL 248
+ S D RI V V N+ K T H + VNA+ G L
Sbjct: 499 VDWQTNQAFASCSTDQRIHVCRLGV---NEPIK-------TFKGHTNEVNAIKWCPQGQL 548
Query: 249 LFSGGCDRWIVVWERERD--------HRMVFAEALWGHTGALLCLINVGDLLASGSADRT 300
L S D + +W RD H W TG N +LAS S D T
Sbjct: 549 LASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDST 608
Query: 301 VRIW--QRGKENCYRCMAFLEGHEKPV 325
VR+W +RG C+ L H +PV
Sbjct: 609 VRLWDVERGS-----CIHTLTKHTEPV 630
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 40/127 (31%), Positives = 60/127 (47%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+GS D ++VW+ +D V TL H STV + L+G S + SG D +
Sbjct: 1050 SGSTDRTLKVWD---MDSGA-------CVHTLQGHTSTVRCMHLHG--SKVVSGSRDATL 1097
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFL 318
VW+ E+ + L GH A+ C+ G L+ SG+ D V+IW ++ C L
Sbjct: 1098 RVWDIEQGSCL---HVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHT---L 1151
Query: 319 EGHEKPV 325
+GH V
Sbjct: 1152 QGHTNRV 1158
Score = 120 (47.3 bits), Expect = 0.00077, P = 0.00077
Identities = 41/149 (27%), Positives = 64/149 (42%)
Query: 178 VNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV 237
V K H+ +GS D ++VW S V+ R TLV H V
Sbjct: 989 VLKGHDDHVITCLQFSGNRIVSGSDDNTLKVW--SAVNGKCLR--------TLVGHTGGV 1038
Query: 238 NALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSA 297
+ ++G+ ++ SG DR + VW+ + L GHT + C+ G + SGS
Sbjct: 1039 WSSQMSGN--IIISGSTDRTLKVWDMDSG---ACVHTLQGHTSTVRCMHLHGSKVVSGSR 1093
Query: 298 DRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
D T+R+W + +C + L GH V+
Sbjct: 1094 DATLRVWDIEQGSC---LHVLVGHLAAVR 1119
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 52/223 (23%), Positives = 95/223 (42%)
Query: 86 FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYV-TVRRHKKRLWLEHWDA 144
F AH +R + S QL+ T K + S+ ++ ++ RH HW
Sbjct: 98 FKAHT-APVR--SVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHT------HWVR 148
Query: 145 VSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADG 204
+ L+ S S D++ KIW+ +N +C+ + + + + +D
Sbjct: 149 CAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDH 208
Query: 205 RIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE 264
+++W+ + NK +H V H VN L+ + G+ L + D + + +
Sbjct: 209 AVKIWD---IRMNK--LLQHYQV-----HSCGVNCLSFHPLGNSLVTASSDGTVKMLDLI 258
Query: 265 RDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ R+++ L GHTG + + G+LL SG AD V IW+
Sbjct: 259 -EGRLIYT--LQGHTGPVFTVSFSKDGELLTSGGADAQVLIWR 298
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 39/175 (22%), Positives = 77/175 (44%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ +N +C+ + + + +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASA 204
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D +++W+ V NK +H V H VN ++ + G+ + + D + +
Sbjct: 205 GSDHTVKIWDIRV---NK--LLQHYQV-----HSGGVNCVSFHPSGNYIITASSDGTLKI 254
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE--NC 311
+ + R+++ L GHTG + + G+L +SG AD V +W+ + NC
Sbjct: 255 LDL-LEGRLIYT--LQGHTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNC 306
>ASPGD|ASPL0000032070 [details] [associations]
symbol:fbx23 species:162425 "Emericella nidulans"
[GO:0071482 "cellular response to light stimulus" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001305 KO:K03362 EMBL:AACD01000096
OrthoDB:EOG4HQHSG RefSeq:XP_663197.1 ProteinModelPortal:Q5B1I7
EnsemblFungi:CADANIAT00003484 GeneID:2871879 KEGG:ani:AN5593.2
HOGENOM:HOG000191354 OMA:TNFQLPH Uniprot:Q5B1I7
Length = 854
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 48/188 (25%), Positives = 72/188 (38%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLES-VNKAHEXXXXXXXXXXXXXXYT 199
H D+V +L + + S D+ KIWN N + H+
Sbjct: 412 HDDSVLNLRFDHRYLVTCSKDKLIKIWNRKNLSPADKDYPSVHQGSGVSYPSYIVDTSVI 471
Query: 200 GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259
S V E + ++ L+ TLV H + VNA+ ++GD + SG DR I
Sbjct: 472 PSP-----VLEAEIAKNHIRTLEPFSLLMTLVGHTAAVNAIQIHGDEIVSASG--DRLIK 524
Query: 260 VWE-RERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFL 318
+W R + F GH + C+ + SGS D T+RI+ C L
Sbjct: 525 IWNIRNGACKKTFV----GHEKGIACVQFDNQRVVSGSNDNTIRIFDHASRAEVAC---L 577
Query: 319 EGHEKPVK 326
GH V+
Sbjct: 578 RGHADLVR 585
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 126 (49.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/133 (28%), Positives = 60/133 (45%)
Query: 130 VRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXX 189
+R H++ +W ++ S +Q + S S DR+ +IWN +C++++
Sbjct: 503 LRGHRRGVWACSFNPFS----RQ--LASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLI 556
Query: 190 XXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLL 249
+ +ADG ++VW S + V TL H V ALA DGSLL
Sbjct: 557 YISQGTQVVSAAADGLVKVWSLSSGE----------CVATLDNHEDRVWALASRFDGSLL 606
Query: 250 FSGGCDRWIVVWE 262
SGG D + VW+
Sbjct: 607 VSGGADAVVSVWK 619
Score = 125 (49.1 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 34/97 (35%), Positives = 46/97 (47%)
Query: 227 VTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT-GALLCL 285
V T+ H VNA+ ++ DG ++ S D+ I +W+ L GH G C
Sbjct: 458 VWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGE---VVGVLRGHRRGVWACS 514
Query: 286 IN-VGDLLASGSADRTVRIWQRGKENCYRCMAFLEGH 321
N LASGS DRT+RIW + C + LEGH
Sbjct: 515 FNPFSRQLASGSGDRTIRIWNVDTQQCVQT---LEGH 548
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 91 DCKIRVWKITASR 103
D ++R+W + +SR
Sbjct: 168 DSRVRLWDLNSSR 180
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 11/58 (18%), Positives = 20/58 (34%)
Query: 155 MYSVSWDRSFKIWNASNYKCLESVNKAH--EXXXXXXXXXXXXXXYTGSADGRIRVWE 210
+ S S D++ ++WN + ++ H E YT I W+
Sbjct: 204 LLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAGEGNLILAWD 261
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 48/204 (23%), Positives = 86/204 (42%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIW--NASNYKCLESVNKAHEXXX 186
T++ HK R+W W K + S D++ +IW N + + ++ H+
Sbjct: 9 TLQGHKGRIWGVAWHP------KGNVFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTI 62
Query: 187 XXXXXXXXXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244
Y SA DG +W +S + E + TL H + V +++ +
Sbjct: 63 REIRWSPCGQ-YLASASFDGTTAIWSKS----SGEFECN----ATLEGHENEVKSVSWSR 113
Query: 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVR 302
G LL + D+ + +WE D A L HT + ++ +LLAS S D T++
Sbjct: 114 SGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNTIK 173
Query: 303 IW-QRGKENCYRCMAFLEGHEKPV 325
++ + ++ + C+A L H V
Sbjct: 174 MFAEDALDSDWDCVATLSSHTSTV 197
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 47/182 (25%), Positives = 69/182 (37%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWN-ASNYKCLESVNKAHEXXXXXXXXX-XXXX 196
H DAV+D+ + + S S D S K+W+ Y CL+S+ K HE
Sbjct: 147 HTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSL-KGHEHTVSSVTFLPTGDF 205
Query: 197 XYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR 256
+ S D I+ W+ S V T H V + ++ DG+L S D+
Sbjct: 206 VLSASRDHTIKQWDIST----------GYCVYTFRGHNDWVRMIRISNDGTLFASASLDQ 255
Query: 257 WIVVWERE--------RDHRMVFAEALWGHTGALLCLI------NVGDLLASGSADRTVR 302
+ VW RDH W A + N +L SGS DR+++
Sbjct: 256 TVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIK 315
Query: 303 IW 304
W
Sbjct: 316 AW 317
>UNIPROTKB|Q5TFK1 [details] [associations]
symbol:EIF3I "Eukaryotic translation initiation factor 3
subunit I" species:9606 "Homo sapiens" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003743 EMBL:AL049795
HOGENOM:HOG000231322 OrthoDB:EOG4HX519 UniGene:Hs.530096
HGNC:HGNC:3272 ChiTaRS:EIF3I EMBL:AL121991 IPI:IPI00642205
SMR:Q5TFK1 STRING:Q5TFK1 Ensembl:ENST00000355082 HOVERGEN:HBG104529
Uniprot:Q5TFK1
Length = 125
Score = 95 (38.5 bits), Expect = 0.00036, P = 0.00036
Identities = 25/81 (30%), Positives = 40/81 (49%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDL- 291
H ++ + N +G LLF+ D + VW R+ GHTGA+ C+ D
Sbjct: 9 HERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERL---GTYMGHTGAVWCVDADWDTK 65
Query: 292 -LASGSADRTVRIW--QRGKE 309
+ +GSAD + R+W + GK+
Sbjct: 66 HVLTGSADNSCRLWDCETGKQ 86
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 117 (46.2 bits), Expect = 0.00038, P = 0.00038
Identities = 41/130 (31%), Positives = 57/130 (43%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL-LFSGGCDRW 257
TG +GRI++W+ V L+ L+ H V L DGSL L S D+
Sbjct: 150 TGLNNGRIKIWD--VYTGT--------LLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKK 199
Query: 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCM 315
+ VW+ + D MV + LWGH + D +L S A + V +W K Y +
Sbjct: 200 LRVWDLKDDGNMV--KVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDK---YTLI 254
Query: 316 AFLEGHEKPV 325
LEGH V
Sbjct: 255 RKLEGHHNDV 264
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 42/175 (24%), Positives = 66/175 (37%)
Query: 141 HWDAVS--DLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DAV+ D + + S S D + IW+ +
Sbjct: 18 HRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA 77
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+GS D +R+W +V + T H +TV ++ DG LL + D+ +
Sbjct: 78 SGSRDKTVRIWVPNVKGES----------TVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 259 VVWERERDHRMVFAEALWGHTGALLC--LINVGDLLASGSADRTVRIWQRGKENC 311
VW HR F +L H + C G L+ S S D+TV++W + C
Sbjct: 128 KVWST---HRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Score = 112 (44.5 bits), Expect = 0.00086, P = 0.00085
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ S S D++ K+W+ ++ +C+ S + D ++VW+
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
H LV H + VNAL+ + G+ L + D + + + + R+++
Sbjct: 219 ----------HRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL-MEGRLLYT- 266
Query: 274 ALWGHTG--ALLCLINVGDLLASGSADRTVRIWQ 305
L GH G + G+ ASG +D V +W+
Sbjct: 267 -LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 116 (45.9 bits), Expect = 0.00041, P = 0.00041
Identities = 40/200 (20%), Positives = 83/200 (41%)
Query: 141 HWDAVSDLV---VKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXX 197
H +SD+V + ++ S S D + ++WN + +C++ + K
Sbjct: 67 HTKGISDIVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNIL 126
Query: 198 YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257
+GS+D I +W+ + N + ++TTL H V+++AL D S++ S D
Sbjct: 127 ISGSSDETITIWD---ITSNGGK-----ILTTLAAHSDPVSSIALTPDDSIIVSASYDGL 178
Query: 258 IVVWERERDH--RMVFAEALWGH---TGALLCLINV----------GDLLASGSADRTVR 302
+ +++ + + + GH T + +IN G + + S D +R
Sbjct: 179 MRLFDLQTSQCLKTLTNSTFGGHGTATASTNDVINFPIAKVELSPNGQFILNSSLDGKIR 238
Query: 303 IWQRGKENCYRCMAFLEGHE 322
+W + Y+ + G +
Sbjct: 239 LWNYMENKVYKTYQGINGEK 258
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 39/167 (23%), Positives = 73/167 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ +N +C+ + + + +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASA 204
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D ++VW+ V NK +H V H VN ++ + + L + D + +
Sbjct: 205 GSDQTVKVWDVRV---NK--LLQHYQV-----HSGGVNCISFHPSDNYLVTASSDGTLKI 254
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ + R+++ L GHTG + + G+L ASG AD V +W+
Sbjct: 255 LDL-LEGRLIYT--LQGHTGPVFTVSFSKGGELFASGGADTQVLLWR 298
>WB|WBGene00012757 [details] [associations]
symbol:Y41C4A.11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR006629
Pfam:PF10601 SMART:SM00714 GeneTree:ENSGT00640000091529
EMBL:AL032627 PIR:T26805 RefSeq:NP_499518.1
ProteinModelPortal:Q9XWU3 SMR:Q9XWU3 PaxDb:Q9XWU3
EnsemblMetazoa:Y41C4A.11 GeneID:189814 KEGG:cel:CELE_Y41C4A.11
UCSC:Y41C4A.11 CTD:189814 WormBase:Y41C4A.11 HOGENOM:HOG000006329
InParanoid:Q9XWU3 OMA:ELNFEMG NextBio:943718 Uniprot:Q9XWU3
Length = 386
Score = 116 (45.9 bits), Expect = 0.00041, P = 0.00041
Identities = 39/164 (23%), Positives = 70/164 (42%)
Query: 165 KIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRH 224
+IWN ++++ + + T S D +IR+++
Sbjct: 132 QIWNYDTKTLVKAMEVSEKSTRAAKFIHRKNWIATASDDQQIRIFDAETFS--------- 182
Query: 225 MLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC 284
L+ H + +L ++ L S DR I VW+ E + RM + H ++
Sbjct: 183 -LINEFTAHSDFIRSLTVHPTLPYLISASDDRKIRVWDWENEWRM--EQEFQEHAHYIMQ 239
Query: 285 L-INVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ +N D + SGS D+T+++W+ G++ C LEGHEK V
Sbjct: 240 IAVNPEDPEMFVSGSLDKTLKVWKLGEQESI-CT--LEGHEKGV 280
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 46/181 (25%), Positives = 70/181 (38%)
Query: 152 QGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
Q L+ S S DR+ KIW+A ++ + +G D +++W
Sbjct: 153 QQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVI-SGGIDNEVKIW-- 209
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE-RERDHRMV 270
D K+ H L H T+ ++L+ +G + + D + VW+ R
Sbjct: 210 ---DIRKQAVLHH-----LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGER 261
Query: 271 FAEALWGHT-----GALLCLINVG-DLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKP 324
+ GH L C + G D + SGSADR V IW N R + L GH
Sbjct: 262 CVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWD---VNTRRILYKLPGHNGS 318
Query: 325 V 325
V
Sbjct: 319 V 319
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 88 (36.0 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 36/135 (26%), Positives = 56/135 (41%)
Query: 154 LMYSVSWDRSFKIWNAS-NYKCLESVN-KAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
L+ S S D + K+W+ S +Y + +++ H + S DG +R+W+
Sbjct: 172 LLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDV 231
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF 271
S K KS T S + ++ + DG L SGG D+ I VWE
Sbjct: 232 STGFCVKVIKS-----AT----ESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKA- 281
Query: 272 AEALWGHTGALLCLI 286
AL GH + C +
Sbjct: 282 --ALLGHENFIECCV 294
Score = 56 (24.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 290 DLLASGSADRTVRIWQ-RGKENCYRCMAFLEGHEKPVK 326
+ +A+G+ D+T+++W+ RG R + L GH+ V+
Sbjct: 321 EFVATGARDKTIKLWEARG-----RLIKTLHGHDNWVR 353
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 70 SSSGSVKSITFH--ITKIFTAHQDCKIRVW 97
S +V + FH T + + +DC I++W
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIW 141
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 88 (36.0 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 36/135 (26%), Positives = 56/135 (41%)
Query: 154 LMYSVSWDRSFKIWNAS-NYKCLESVN-KAHEXXXXXXXXXXXXXXYTGSADGRIRVWER 211
L+ S S D + K+W+ S +Y + +++ H + S DG +R+W+
Sbjct: 172 LLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDV 231
Query: 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF 271
S K KS T S + ++ + DG L SGG D+ I VWE
Sbjct: 232 STGFCVKVIKS-----AT----ESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKA- 281
Query: 272 AEALWGHTGALLCLI 286
AL GH + C +
Sbjct: 282 --ALLGHENFIECCV 294
Score = 56 (24.8 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 12/38 (31%), Positives = 24/38 (63%)
Query: 290 DLLASGSADRTVRIWQ-RGKENCYRCMAFLEGHEKPVK 326
+ +A+G+ D+T+++W+ RG R + L GH+ V+
Sbjct: 321 EFVATGARDKTIKLWEARG-----RLIKTLHGHDNWVR 353
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 70 SSSGSVKSITFH--ITKIFTAHQDCKIRVW 97
S +V + FH T + + +DC I++W
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIW 141
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 112 (44.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 33/113 (29%), Positives = 53/113 (46%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
TGSAD +++W D +K +L H +V L L F+ G DR I
Sbjct: 608 TGSADRNVKIWGLDFGDCHK----------SLFAHDDSVMYLRFVPKSHLFFTAGKDRKI 657
Query: 259 VVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKE 309
W+ ++ + + L GH + CL GD + S S D+++R+W+R +E
Sbjct: 658 KQWDADKFEHI---QTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWERTRE 707
Score = 53 (23.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 14/74 (18%), Positives = 29/74 (39%)
Query: 141 HWDAVSDLVV--KQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H DA++ + ++ L+ + D K W+ C +++
Sbjct: 148 HKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLI 207
Query: 199 TGSADGRIRVWERS 212
TG++D +R W+ S
Sbjct: 208 TGASDSELRAWDIS 221
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 114 (45.2 bits), Expect = 0.00048, P = 0.00048
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 227 VTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL--LC 284
++ L H V +A N G++L S G D+ I +W E + + L GH + +
Sbjct: 6 LSDLEGHEDRVWNVAWNPSGTILASCGGDKSIRLWGLEGGSWVCKSVLLDGHQRTVRGVS 65
Query: 285 LINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
N G LAS S D T IW+R +++ + A LEGHE VK
Sbjct: 66 WSNCGRYLASSSFDGTTCIWRR-QDDTFESCATLEGHENEVK 106
>UNIPROTKB|F1NIY8 [details] [associations]
symbol:F1NIY8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00550000075093 OMA:AAKDCTI EMBL:AADN02052957
EMBL:AADN02052958 IPI:IPI00601574 ProteinModelPortal:F1NIY8
Ensembl:ENSGALT00000002170 Uniprot:F1NIY8
Length = 364
Score = 115 (45.5 bits), Expect = 0.00049, P = 0.00049
Identities = 45/182 (24%), Positives = 80/182 (43%)
Query: 135 KRLWL--EHWDAVSDLVVKQGL--MYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXX 190
KRL+ H DAVS L ++G +YS S DRS K+WN +E++ +
Sbjct: 175 KRLYTFTGHRDAVSGLSFRKGTYQLYSASHDRSVKVWNVEENAYVETLFGHQDVITGMDS 234
Query: 191 XXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLF 250
+G DG +R W+ + + ++ H ++ + + ++ DGS+
Sbjct: 235 LSRECCVTSGGRDGTVRFWK--IPEESQLIFYGHQGSIDCIQLINEEHMVSGADDGSVAL 292
Query: 251 SGGCDRWIVVWERERDHRMVFAEAL----WGHTGALLCLINVGDLLASGSADRTVRIWQR 306
G + + R+ A+ L W A+ L+N DL+A+GS V++W+
Sbjct: 293 WGLAKKKPLALVRQSHGTQGSAQDLQQPYW--VSAVAALLN-SDLVATGSHSGCVKLWKC 349
Query: 307 GK 308
G+
Sbjct: 350 GE 351
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 42/170 (24%), Positives = 72/170 (42%)
Query: 159 SWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNK 218
S D + K+W+ ++ + ++ ++ D ++ W+ ++ NK
Sbjct: 226 STDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWD---LESNK 282
Query: 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGH 278
+ V HR V ++AL+ +LFSGG D + VW+ R +F + GH
Sbjct: 283 Q-------VRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDM-RTRANIFE--MKGH 332
Query: 279 TGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
G +L L N + SGS D TV++W A L H+K V+
Sbjct: 333 KGTILSLKSQNADPQVISGSMDTTVKLWDLATGTS---AATLTNHKKGVR 379
>TAIR|locus:2028481 [details] [associations]
symbol:SCD1 "STOMATAL CYTOKINESIS-DEFECTIVE 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA;IMP] [GO:0009825 "multidimensional cell growth"
evidence=IMP] [GO:0010052 "guard cell differentiation"
evidence=IMP] [GO:0010235 "guard mother cell cytokinesis"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0009825 HSSP:P16649 GO:GO:0080008 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 EMBL:AY082605
IPI:IPI00522154 RefSeq:NP_850959.1 UniGene:At.38309
ProteinModelPortal:Q8RXA7 SMR:Q8RXA7 PaxDb:Q8RXA7 PRIDE:Q8RXA7
EnsemblPlants:AT1G49040.1 GeneID:841327 KEGG:ath:AT1G49040
TAIR:At1g49040 HOGENOM:HOG000029412 InParanoid:Q8RXA7 OMA:YRNFIEN
PhylomeDB:Q8RXA7 ProtClustDB:CLSN2680426 Genevestigator:Q8RXA7
GO:GO:0010235 Uniprot:Q8RXA7
Length = 1187
Score = 121 (47.7 bits), Expect = 0.00052, P = 0.00052
Identities = 48/199 (24%), Positives = 82/199 (41%)
Query: 129 TVRRHKKRLWLE-HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXX 187
++R + R L+ H V + +G + S S D S +W+ + LE + K H+
Sbjct: 885 SLRGSELRATLKGHTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEEL-KGHDSQVS 943
Query: 188 XXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS 247
T + DG +++W+ M V T+ + S + +L +
Sbjct: 944 CVKMLSGERVLTAAHDGTVKMWDVRT----------DMCVATVGRCSSAILSLEYDDSTG 993
Query: 248 LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRG 307
+L + G D +W+ +M L GHT + + V D L +GS D T R+W
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQM---HKLKGHTKWIRSIRMVEDTLITGSDDWTARVWSVS 1050
Query: 308 KENCYRCMAFLEGHEKPVK 326
+ +C A L H PV+
Sbjct: 1051 RGSCD---AVLACHAGPVQ 1066
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 51/203 (25%), Positives = 80/203 (39%)
Query: 128 VTVRRHKKRLWLEHWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
VT K + + H VS LV+ + L+ + D +W+ + C+ S+
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 185 XXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244
GS G IRVW+ ++ TL+ H++ + +L +
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAK----------ILRTLLGHKANICSLDFHP 115
Query: 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVR 302
GS + SG D I +W+ R +F HT A+ CL G LAS + D TV+
Sbjct: 116 YGSFVASGSLDTDIKLWDVRRKG-CIFKYK--SHTQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
+W + M GH PV
Sbjct: 173 LWDL---TAGKVMFEFTGHSGPV 192
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE--RERDHRMVFA 272
D ++ L H S V +++ + G LL + D+ I +WE + D+
Sbjct: 127 DREEDEDDEWRFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETV 186
Query: 273 EALWGHTGALLCLI--NVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGH 321
+ H G + C+ + LASGS D T+RIW+ ++ + +A ++GH
Sbjct: 187 AVMQEHEGDVKCVAWHPAEECLASGSYDDTIRIWREDIDD-WGQVACIKGH 236
Score = 54 (24.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 12/62 (19%), Positives = 28/62 (45%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXX----XXXXXXXYTGSADGRIRVW 209
L+ + S D++ ++++ N++ L +++ H+ TGS D + +W
Sbjct: 41 LVATCSSDKTVRVYSLVNFRLLSTISGGHKRSIRTCAWKPNVSGESVLATGSFDATVGIW 100
Query: 210 ER 211
R
Sbjct: 101 RR 102
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 38/167 (22%), Positives = 72/167 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
HW + L+ S S D++ KIW+ +N +C+ + + +
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASA 204
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
+D +++W+ V NK +H V H VN ++ + G+ L + D + +
Sbjct: 205 GSDHTVKIWDIRV---NK--LLQHYQV-----HSGGVNCVSFHPSGNYLITASSDGTLKI 254
Query: 261 WERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQ 305
+ + R+++ L GHTG + + G+L SG AD V +W+
Sbjct: 255 LDL-LEGRLIYT--LQGHTGPVFTVSFSKGGELFTSGGADAQVLLWR 298
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 117 (46.2 bits), Expect = 0.00058, P = 0.00058
Identities = 58/239 (24%), Positives = 102/239 (42%)
Query: 87 TAHQDCKIRVWKI-TASRQH------QLVSTLPTVKD-RLIRSVLPNNYVT---VRRHKK 135
T +D +IRVW I T + +H Q + +L + R I S + V + K
Sbjct: 333 TGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKL 392
Query: 136 RLWLEHWDAVSDLVVK-QGLMYSV-SWDRSFKIWNASN-Y--KCLESVNKAHEXXXXXXX 190
L D V+ + + GL + S D++ ++W+ + Y + LE+ + +
Sbjct: 393 VYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAF 452
Query: 191 XXXXXXXYTGSADGRIRVWERSVV--DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL 248
+GS D I++WE ++ +N K T H+ V ++ L DG
Sbjct: 453 APNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGGKCH-RTFEGHKDFVLSVCLTPDGHW 511
Query: 249 LFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLIN--VGDLLASGSADRTVRIWQ 305
+ SG DR + W+ + + L GH +++ + G+L A+GS D RIW+
Sbjct: 512 VMSGSKDRGVQFWDPITGNAQMM---LQGHKNSVISVAPSPTGNLFATGSGDMRARIWR 567
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 107 (42.7 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 34/101 (33%), Positives = 49/101 (48%)
Query: 227 VTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC-- 284
V+ L H V ++A + G +L S D I V+ E D VFA+ L GH +
Sbjct: 146 VSVLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQ-LSGHDSTVWKAE 204
Query: 285 LINVGDLLASGSADRTVRIWQR----GKENCYRCMAFLEGH 321
GD+LAS S D V++W GK + + C+A L G+
Sbjct: 205 FSPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSGY 245
Score = 46 (21.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 64 TFSNDLSSSGSVKSITFHI--TKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRL--I 119
+FS + S++ +T+ T I +A D + +WKI+ + + L +++ +
Sbjct: 52 SFSLPEAHKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEV 111
Query: 120 RSVL--PNNYV--TVRRHKKRLWLEHWDAVSDL 148
+ V P+ ++ T R K +WL +D D+
Sbjct: 112 KCVAWCPSGHLIATCGRDKS-VWLWEFDDEEDV 143
>RGD|1582817 [details] [associations]
symbol:Pwp2 "PWP2 periodic tryptophan protein homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1582817 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GeneTree:ENSGT00550000074981 KO:K14558
InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 CTD:5822 OrthoDB:EOG4R7V93 IPI:IPI00372838
RefSeq:NP_001162124.1 UniGene:Rn.208019 ProteinModelPortal:D3ZV54
PRIDE:D3ZV54 Ensembl:ENSRNOT00000001605 GeneID:690297
KEGG:rno:690297 UCSC:RGD:1582817 NextBio:740604 Uniprot:D3ZV54
Length = 920
Score = 119 (46.9 bits), Expect = 0.00064, P = 0.00064
Identities = 43/170 (25%), Positives = 74/170 (43%)
Query: 141 HWDAVSDLVVKQGLMYSVSW--DRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H++++ L Y V+ D K+WN + C ++ +
Sbjct: 374 HFNSMVALAYSPDGQYIVTGGDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTATGHVIV 433
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST-VNALALNGDGSLLFSGGCDRW 257
T S DG +R + D ++ R R T R T + +A++ G ++ +G D +
Sbjct: 434 TSSLDGTVRAY-----DLHRYRNFR-----TFTSPRPTQFSCVAVDSSGEIVSAGAQDSF 483
Query: 258 -IVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLASGSADRTVRIW 304
I VW + R++ + L GH G + LC + +LAS S D+TVR+W
Sbjct: 484 EIFVWSMQTG-RLL--DVLSGHEGPISGLCFNPMKSILASASWDKTVRLW 530
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 116 (45.9 bits), Expect = 0.00064, P = 0.00064
Identities = 52/218 (23%), Positives = 90/218 (41%)
Query: 124 PNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK---------- 173
PN V +R H+ +++ W+ VSDL+ S S D + +IWN S
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLA------SGSGDSTARIWNLSENSTSGSTQLVLR 212
Query: 174 -CLESVNK---AHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTT 229
C+ + +++ TGS DG R+W + D N L +T
Sbjct: 213 HCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTK---DGN--------LAST 261
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWG-HTGALLCLI-N 287
L +H+ + AL N G+ + S G D+ ++W+ A+ L+ H+ L +
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGE----AKQLFPFHSAPALDVDWQ 317
Query: 288 VGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ AS S D + + + G++ R + +GH V
Sbjct: 318 SNNTFASCSTDMCIHVCKLGQD---RPIKTFQGHTNEV 352
>DICTYBASE|DDB_G0284471 [details] [associations]
symbol:kif8 "kinesin-4" species:44689 "Dictyostelium
discoideum" [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003777 "microtubule
motor activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001752 InterPro:IPR015943
InterPro:IPR019821 Pfam:PF00225 Pfam:PF00400 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00129 SMART:SM00320 dictyBase:DDB_G0284471 GO:GO:0005524
GO:GO:0005737 GO:GO:0005875 GO:GO:0051301 GO:GO:0007067
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 EMBL:AAFI02000066 HSSP:P33173
EMBL:AY484462 EMBL:U69985 RefSeq:XP_638546.1
ProteinModelPortal:Q6S003 EnsemblProtists:DDB0191403 GeneID:8624639
KEGG:ddi:DDB_G0284471 InParanoid:Q6S003 Uniprot:Q6S003
Length = 1873
Score = 99 (39.9 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 24/73 (32%), Positives = 37/73 (50%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLL 292
H VN L ++ ++FSGG D I W D + L GH ++ CL + + L
Sbjct: 1806 HNDWVNCLCIHN--GMIFSGGKDSNIKGW----DPLLSSNSLLLGHESSISCLTSSKEFL 1859
Query: 293 ASGSADRTVRIWQ 305
SGS D+ ++IW+
Sbjct: 1860 FSGSTDKCIKIWK 1872
Score = 64 (27.6 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 135 KRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVN 179
++L H D V+ + V ++YS S DR+ K W+ S+ L + N
Sbjct: 1672 QKLQPPHHDGVTSIAVLDDVIYSGSRDRTIKRWDVSSINNLINNN 1716
Score = 50 (22.7 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 40 SLLYAASLNE-INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRV 96
S LY+ ++ I ++DL H DLSS G V+S+ + + +F+ + ++V
Sbjct: 1522 STLYSGGSDKNIKLWDL-----HTGDNMLDLSSPGPVRSLCINGSSGCMFSGGAERTVKV 1576
Query: 97 WKI 99
W I
Sbjct: 1577 WDI 1579
>ASPGD|ASPL0000040628 [details] [associations]
symbol:AN2997 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016282
"eukaryotic 43S preinitiation complex" evidence=IEA] [GO:0071541
"eukaryotic translation initiation factor 3 complex, eIF3m"
evidence=IEA] [GO:0034399 "nuclear periphery" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0003743 HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008
OMA:ATVAGWS RefSeq:XP_660601.1 ProteinModelPortal:Q5B8Y3
STRING:Q5B8Y3 EnsemblFungi:CADANIAT00010083 GeneID:2874320
KEGG:ani:AN2997.2 OrthoDB:EOG44QX8Q Uniprot:Q5B8Y3
Length = 336
Score = 113 (44.8 bits), Expect = 0.00070, P = 0.00070
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG 289
L H ++N + N DG LLFS D+ + W R+ GH GA+ ++V
Sbjct: 6 LAGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERL---GTYSGHLGAIWT-VDVS 61
Query: 290 D---LLASGSADRTVRIWQRGKENCYRCMAF 317
LLA+GSAD +VR+W C + F
Sbjct: 62 PNTVLLATGSADNSVRLWNVKTGECVKVWEF 92
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 117 (46.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 47/199 (23%), Positives = 85/199 (42%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIW--NASN-YKCL-ESVNKAHEXXXXXXXXXXX 194
H D V L V ++G ++ S + D+S ++W N S C+ + H
Sbjct: 375 HTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKE 434
Query: 195 XXXYTGSADGRIRVWE--RSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLL 249
TGS D +++W +++ + + + T H +N++A+ + LL
Sbjct: 435 TFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLL 494
Query: 250 FSGGCDRWIVVWERERDHRM-VFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQR 306
+G DR +W R + F+ GH L C+ + +LA+ SAD T+++W
Sbjct: 495 ATGSQDRTAKLWALPRCQLLGTFS----GHRRGLWCVQFSPMDQVLATASADGTIKLWAL 550
Query: 307 GKENCYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 551 QD---FSCLKTFEGHDASV 566
Score = 44 (20.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK----IFTAHQDCKIRVWKI 99
+ V+D++ Y F S G V + FH +F++ D IRVW +
Sbjct: 133 VRVWDVVRCYG-THHFRG---SPGVVHLVAFHPDPARLLLFSSAADTSIRVWSL 182
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 117 (46.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 47/199 (23%), Positives = 85/199 (42%)
Query: 141 HWDAVSDL-VVKQGLMY-SVSWDRSFKIW--NASN-YKCL-ESVNKAHEXXXXXXXXXXX 194
H D V L V ++G ++ S + D+S ++W N S C+ + H
Sbjct: 375 HTDIVLALDVFRKGRLFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKE 434
Query: 195 XXXYTGSADGRIRVWE--RSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLL 249
TGS D +++W +++ + + + T H +N++A+ + LL
Sbjct: 435 TFLVTGSQDCTVKLWPLPEALLSKGTGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLL 494
Query: 250 FSGGCDRWIVVWERERDHRM-VFAEALWGHTGALLCL--INVGDLLASGSADRTVRIWQR 306
+G DR +W R + F+ GH L C+ + +LA+ SAD T+++W
Sbjct: 495 ATGSQDRTAKLWALPRCQLLGTFS----GHRRGLWCVQFSPMDQVLATASADGTIKLWAL 550
Query: 307 GKENCYRCMAFLEGHEKPV 325
+ C+ EGH+ V
Sbjct: 551 QD---FSCLKTFEGHDASV 566
Score = 44 (20.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 50 INVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK----IFTAHQDCKIRVWKI 99
+ V+D++ Y F S G V + FH +F++ D IRVW +
Sbjct: 133 VRVWDVVRCYG-THHFRG---SPGVVHLVAFHPDPARLLLFSSAADTSIRVWSL 182
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 117 (46.2 bits), Expect = 0.00073, P = 0.00073
Identities = 45/175 (25%), Positives = 77/175 (44%)
Query: 141 HWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTG 200
H + V L + ++ + S+D + KIW+ + L ++ + HE +G
Sbjct: 348 HTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTL-RGHESGIRCLQFDDTKLI-SG 405
Query: 201 SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260
S D I+VW + ++T HR V + L+ D S+L SG D+ + +
Sbjct: 406 SMDRTIKVWNWRTGE----------CISTYTGHRGGV--IGLHFDASILASGSVDKTVKI 453
Query: 261 WERERDHRMVFAEALWGHTGALLCL-INVGD-LLASGSADRTVRIWQRGKENCYR 313
W E D + F+ L GHT + + ++ + S S D TVR+W + C R
Sbjct: 454 WNFE-D-KSTFS--LRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIR 504
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 113 (44.8 bits), Expect = 0.00074, P = 0.00073
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 84 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 143
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 144 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 193
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 254 TIKMWD---VSTGMCLMTLVGHDNWVR 277
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 113 (44.8 bits), Expect = 0.00082, P = 0.00082
Identities = 39/129 (30%), Positives = 57/129 (44%)
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
T SAD +++W S D + ER TL H+ VN A + D + + D+ +
Sbjct: 96 TSSADKTVKIWNMS--DLSCER--------TLTGHKLGVNDFAWSADSKSIVTASDDKTL 145
Query: 259 VVWERERDHRMVFAEALWGHTGALLCL-INV-GDLLASGSADRTVRIWQRGKENCYRCMA 316
++E + A+ L GHT + C N L+ SGS D +VRIW C+
Sbjct: 146 KIYEVPT---VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD---VRTGMCVK 199
Query: 317 FLEGHEKPV 325
L H PV
Sbjct: 200 TLPAHSDPV 208
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 115 (45.5 bits), Expect = 0.00084, P = 0.00084
Identities = 51/217 (23%), Positives = 88/217 (40%)
Query: 124 PNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK---------- 173
PN V +R H+ +++ W+ VSDL+ S S D + +IWN S
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLA------SGSGDSTARIWNLSENSTSGSTQLVLR 212
Query: 174 -CLESVNK---AHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTT 229
C+ + +++ TGS DG R+W + D N L +T
Sbjct: 213 HCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTK---DGN--------LAST 261
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI-NV 288
L +H+ + AL N G+ + S G D+ ++W+ H + H+ L +
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDA---HTGEAKQQFPFHSAPALDVDWQS 318
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ AS S D + + + G++ R + +GH V
Sbjct: 319 NNTFASCSTDMCIHVCKLGQD---RPIKTFQGHTNEV 352
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 115 (45.5 bits), Expect = 0.00084, P = 0.00084
Identities = 51/217 (23%), Positives = 88/217 (40%)
Query: 124 PNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK---------- 173
PN V +R H+ +++ W+ VSDL+ S S D + +IWN S
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLA------SGSGDSTARIWNLSENSTSGSTQLVLR 212
Query: 174 -CLESVNK---AHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTT 229
C+ + +++ TGS DG R+W + D N L +T
Sbjct: 213 HCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTK---DGN--------LAST 261
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI-NV 288
L +H+ + AL N G+ + S G D+ ++W+ H + H+ L +
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDA---HTGEAKQQFPFHSAPALDVDWQS 318
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ AS S D + + + G++ R + +GH V
Sbjct: 319 NNTFASCSTDMCIHVCKLGQD---RPIKTFQGHTNEV 352
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 115 (45.5 bits), Expect = 0.00084, P = 0.00084
Identities = 51/217 (23%), Positives = 88/217 (40%)
Query: 124 PNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK---------- 173
PN V +R H+ +++ W+ VSDL+ S S D + +IWN S
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLA------SGSGDSTARIWNLSENSTSGPTQLVLR 212
Query: 174 -CLESVNK---AHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTT 229
C+ + +++ TGS DG R+W + D N L +T
Sbjct: 213 HCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTK---DGN--------LAST 261
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI-NV 288
L +H+ + AL N G+ + S G D+ ++W+ H + H+ L +
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDA---HTGEAKQQFPFHSAPALDVDWQS 318
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ AS S D + + + G++ R + +GH V
Sbjct: 319 NNTFASCSTDMCIHVCKLGQD---RPIKTFQGHTNEV 352
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 115 (45.5 bits), Expect = 0.00084, P = 0.00084
Identities = 51/217 (23%), Positives = 88/217 (40%)
Query: 124 PNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK---------- 173
PN V +R H+ +++ W+ VSDL+ S S D + +IWN S
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLA------SGSGDSTARIWNLSENSTSGSTQLVLR 212
Query: 174 -CLESVNK---AHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTT 229
C+ + +++ TGS DG R+W + D N L +T
Sbjct: 213 HCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTK---DGN--------LAST 261
Query: 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI-NV 288
L +H+ + AL N G+ + S G D+ ++W+ H + H+ L +
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDA---HTGEAKQQFPFHSAPALDVDWQS 318
Query: 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPV 325
+ AS S D + + + G++ R + +GH V
Sbjct: 319 NNTFASCSTDMCIHVCKLGQD---RPIKTFQGHTNEV 352
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 118 (46.6 bits), Expect = 0.00086, P = 0.00086
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 157 SVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSVVDH 216
+ S DR+ ++W ++ L TGS D R+WE +
Sbjct: 738 TASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE---IQT 794
Query: 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW 276
K V + HR+ + +A + DG LL + G D +++W+ ++ + +
Sbjct: 795 GK-------CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKV---KKMD 844
Query: 277 GHTGALLCL-INV-GDLLASGSADRTVRIW 304
GHT + L + G +LASGS+D TVR+W
Sbjct: 845 GHTKCVYSLDFSCDGSILASGSSDCTVRLW 874
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 112 (44.5 bits), Expect = 0.00088, P = 0.00087
Identities = 44/193 (22%), Positives = 81/193 (41%)
Query: 134 KKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXX 191
KK L+ H +SD+ + S S D++ K+W+ + KCL+++ +
Sbjct: 74 KKTLY-GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFN 132
Query: 192 XXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251
+GS D +++WE V K K TL H ++A+ N +GSL+ S
Sbjct: 133 PPSNLIVSGSFDESVKIWE---VKTGKCLK-------TLSAHSDPISAVNFNCNGSLIVS 182
Query: 252 GGCDRWIVVWERERDHRM-VFAEALWGHTGALLCLINV-GDLLASGSADRTVRIWQRGKE 309
G D +W+ + A+ G+ + G + + + D T+++W +
Sbjct: 183 GSYDGLCRIWDAASGQCLRTLADE--GNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRG 240
Query: 310 NCYRCMAFLEGHE 322
RC+ GH+
Sbjct: 241 ---RCLKTYTGHK 250
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 116 (45.9 bits), Expect = 0.00091, P = 0.00091
Identities = 51/203 (25%), Positives = 80/203 (39%)
Query: 128 VTVRRHKKRLWLEHWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
VT K + + H VS LV+ + L+ + D +W+ + C+ S+
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 185 XXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244
GS G IRVW+ ++ TL+ H++ + +L +
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAK----------ILRTLLGHKANICSLDFHP 115
Query: 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVR 302
GS + SG D I +W+ R +F HT A+ CL G LAS + D TV+
Sbjct: 116 YGSFVASGSLDTDIKLWDVRRKG-CIFKYK--SHTQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
+W + M GH PV
Sbjct: 173 LWDL---TAGKVMFEFTGHYGPV 192
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 116 (45.9 bits), Expect = 0.00091, P = 0.00091
Identities = 51/203 (25%), Positives = 80/203 (39%)
Query: 128 VTVRRHKKRLWLEHWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
VT K + + H VS LV+ + L+ + D +W+ + C+ S+
Sbjct: 6 VTKTAWKLQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTP 65
Query: 185 XXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244
GS G IRVW+ ++ TL+ H++ + +L +
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAK----------ILRTLLGHKANICSLDFHP 115
Query: 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVR 302
GS + SG D I +W+ R +F HT A+ CL G LAS + D TV+
Sbjct: 116 YGSFVASGSLDTDIKLWDVRRKG-CIFKYK--SHTQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
+W + M GH PV
Sbjct: 173 LWDL---TAGKVMFEFTGHYGPV 192
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 112 (44.5 bits), Expect = 0.00091, P = 0.00091
Identities = 46/203 (22%), Positives = 83/203 (40%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNAS-NYKCLESVNKAHEXXXX 187
T++ HK R+W W K + S D++ ++W+ S N +++
Sbjct: 9 TLQGHKGRIWGVAWHP------KGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTI 62
Query: 188 XXXXXXXXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD 245
Y SA D +W +S + E + TL H + V +++ +
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKS----SGEFECN----ATLEGHENEVKSVSWSRS 114
Query: 246 GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRI 303
G LL + D+ + +WE D A L HT + ++ D+LAS S D T+++
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKM 174
Query: 304 WQRGK-ENCYRCMAFLEGHEKPV 325
+ + ++ + C A L H V
Sbjct: 175 FAESQLDSDWDCTATLSSHTSTV 197
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 112 (44.5 bits), Expect = 0.00091, P = 0.00091
Identities = 46/203 (22%), Positives = 83/203 (40%)
Query: 129 TVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNAS-NYKCLESVNKAHEXXXX 187
T++ HK R+W W K + S D++ ++W+ S N +++
Sbjct: 9 TLQGHKGRIWGVAWHP------KGNVFASCGEDKAIRVWSLSGNTWSTKTILSDGHKRTI 62
Query: 188 XXXXXXXXXXYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD 245
Y SA D +W +S + E + TL H + V +++ +
Sbjct: 63 REIRWSPCGQYLASASFDATTAIWSKS----SGEFECN----ATLEGHENEVKSVSWSRS 114
Query: 246 GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRI 303
G LL + D+ + +WE D A L HT + ++ D+LAS S D T+++
Sbjct: 115 GGLLATCSRDKSVWIWEVAGDDEFECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKM 174
Query: 304 WQRGK-ENCYRCMAFLEGHEKPV 325
+ + ++ + C A L H V
Sbjct: 175 FAESQLDSDWDCTATLSSHTSTV 197
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 112 (44.5 bits), Expect = 0.00092, P = 0.00092
Identities = 30/96 (31%), Positives = 45/96 (46%)
Query: 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGD 290
H T+ +A + G L S D + +W+R R L GH + + G
Sbjct: 59 HTRTIRDVAWSPCGRFLASASFDATVAIWDR-RSGEFECNATLEGHENEVKSVSWSKSGA 117
Query: 291 LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326
LLA+ S D++V IW+ +E+ Y C A L H + VK
Sbjct: 118 LLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVK 153
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 113 (44.8 bits), Expect = 0.00097, P = 0.00097
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 154 LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXYTGSADGRIRVWERSV 213
L+ S S D++ K+W+ ++ +C+ S + S D ++VW+ V
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWD--V 216
Query: 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAE 273
H R +H + H + VNAL+ + G+ L + D + + + + R+++
Sbjct: 217 RTH---RLLQHYQL-----HSAAVNALSFHPSGNYLLTASSDSTLKILDL-MEGRLLYT- 266
Query: 274 ALWGHTG--ALLCLINVGDLLASGSADRTVRIWQ 305
L GH G + G+ ASG +D V +W+
Sbjct: 267 -LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 113 (44.8 bits), Expect = 0.00099, P = 0.00098
Identities = 47/207 (22%), Positives = 79/207 (38%)
Query: 141 HWDAVSDLVVKQG--LMYSVSWDRSFKIWNASNYKCLESVNKAHEXXXXXXXXXXXXXXY 198
H D+V D+ L+ S S D + K+W+ ++C+ +++
Sbjct: 149 HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV 208
Query: 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWI 258
+ S D I++WE V T HR V + N DG+L+ S D+ +
Sbjct: 209 SASRDKTIKMWEVQT----------GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 258
Query: 259 VVW---ERE-----RDHRMVFAEALWGHTGALLCLINV-----------GDLLASGSADR 299
VW +E R+H V W + + G L SGS D+
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 300 TVRIWQRGKENCYRCMAFLEGHEKPVK 326
T+++W + C+ L GH+ V+
Sbjct: 319 TIKMWD---VSTGMCLMTLVGHDNWVR 342
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 115 (45.5 bits), Expect = 0.00099, P = 0.00099
Identities = 51/203 (25%), Positives = 81/203 (39%)
Query: 128 VTVRRHKKRLWLEHWDAVSDLVVKQG---LMYSVSWDRSFKIWNASNYKCLESVNKAHEX 184
VT K + + H VS LV+ + L+ + D +W+ + C+ S+
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 185 XXXXXXXXXXXXXYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244
GS G IRVW+ ++ TL+ H++ + +L +
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLEAAK----------ILRTLMGHKANICSLDFHP 115
Query: 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL--INVGDLLASGSADRTVR 302
G + SG D I +W+ R VF GH+ A+ CL G LAS + D TV+
Sbjct: 116 YGEFVASGSQDTNIKLWDIRRKG-CVFRYR--GHSQAVRCLRFSPDGKWLASAADDHTVK 172
Query: 303 IWQRGKENCYRCMAFLEGHEKPV 325
+W + M+ GH PV
Sbjct: 173 LWDL---TAGKMMSEFPGHTGPV 192
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.133 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 357 318 0.00083 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 241
No. of states in DFA: 624 (66 KB)
Total size of DFA: 268 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.45u 0.08s 27.53t Elapsed: 00:00:01
Total cpu time: 27.49u 0.09s 27.58t Elapsed: 00:00:01
Start: Sat May 11 12:41:38 2013 End: Sat May 11 12:41:39 2013
WARNINGS ISSUED: 1