Query 038568
Match_columns 357
No_of_seqs 726 out of 1663
Neff 12.0
Searched_HMMs 29240
Date Mon Mar 25 21:32:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038568.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038568hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 3E-51 1E-55 349.5 35.3 272 28-357 107-408 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 3.1E-50 1.1E-54 335.1 37.4 287 14-357 45-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 2.5E-50 8.5E-55 332.4 35.5 281 14-357 22-318 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 3.3E-48 1.1E-52 324.3 36.8 289 14-357 54-354 (354)
5 4gqb_B Methylosome protein 50; 100.0 1.4E-48 4.7E-53 324.3 32.5 276 28-357 29-328 (344)
6 4g56_B MGC81050 protein; prote 100.0 2E-48 6.9E-53 325.8 31.6 280 28-357 41-340 (357)
7 3iz6_a 40S ribosomal protein R 100.0 8.6E-49 2.9E-53 331.3 28.8 299 11-357 53-372 (380)
8 2ynn_A Coatomer subunit beta'; 100.0 2.4E-47 8.1E-52 312.7 35.3 280 15-354 4-297 (304)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-47 1.5E-51 316.6 36.5 296 13-357 4-332 (345)
10 2hes_X YDR267CP; beta-propelle 100.0 3.9E-47 1.3E-51 315.0 35.8 295 13-357 3-325 (330)
11 4ery_A WD repeat-containing pr 100.0 3E-46 1E-50 307.8 37.4 283 12-357 11-309 (312)
12 3frx_A Guanine nucleotide-bind 100.0 3.3E-46 1.1E-50 307.9 35.4 279 13-357 6-314 (319)
13 1erj_A Transcriptional repress 100.0 4.4E-46 1.5E-50 316.1 35.4 283 28-357 63-386 (393)
14 2xzm_R RACK1; ribosome, transl 100.0 4.9E-46 1.7E-50 310.3 34.8 285 12-357 9-337 (343)
15 1nr0_A Actin interacting prote 100.0 1.4E-45 4.9E-50 330.0 40.3 322 12-357 178-608 (611)
16 4aow_A Guanine nucleotide-bind 100.0 6.3E-45 2.1E-49 303.6 36.8 287 11-357 25-334 (340)
17 1nr0_A Actin interacting prote 100.0 2.1E-44 7.3E-49 322.4 39.1 304 28-357 17-352 (611)
18 1sq9_A Antiviral protein SKI8; 100.0 8.9E-44 3E-48 302.9 35.3 281 15-357 7-392 (397)
19 2ynn_A Coatomer subunit beta'; 100.0 6.2E-44 2.1E-48 292.4 32.8 243 60-357 4-256 (304)
20 2ymu_A WD-40 repeat protein; u 100.0 1.1E-43 3.8E-48 316.8 36.9 276 13-357 292-577 (577)
21 3odt_A Protein DOA1; ubiquitin 100.0 7E-43 2.4E-47 287.8 36.3 280 12-357 6-293 (313)
22 1vyh_C Platelet-activating fac 100.0 5.6E-43 1.9E-47 298.4 32.8 239 62-357 101-366 (410)
23 3dm0_A Maltose-binding peripla 100.0 6.7E-43 2.3E-47 317.6 35.0 280 15-357 373-690 (694)
24 3zwl_B Eukaryotic translation 100.0 6.6E-42 2.3E-46 288.4 37.6 272 28-357 31-343 (369)
25 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-42 5.5E-47 292.6 33.7 287 28-357 7-358 (372)
26 3ei3_B DNA damage-binding prot 100.0 1.7E-42 5.7E-47 293.6 33.5 290 12-357 61-379 (383)
27 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-42 4.9E-47 298.7 33.4 270 28-357 132-411 (435)
28 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-42 1.6E-46 296.6 36.7 286 12-357 147-439 (445)
29 2ovr_B FBW7, F-BOX/WD repeat p 100.0 6.8E-42 2.3E-46 295.5 36.8 274 16-357 110-388 (445)
30 4gqb_B Methylosome protein 50; 100.0 2.5E-42 8.7E-47 286.6 31.9 237 28-309 81-332 (344)
31 2ymu_A WD-40 repeat protein; u 100.0 6.8E-42 2.3E-46 305.2 36.9 276 13-357 251-536 (577)
32 3ow8_A WD repeat-containing pr 100.0 1.5E-42 5.3E-47 285.9 29.5 240 63-357 26-276 (321)
33 3gre_A Serine/threonine-protei 100.0 1.8E-42 6.2E-47 298.5 30.0 298 12-357 50-437 (437)
34 1gxr_A ESG1, transducin-like e 100.0 3.7E-41 1.3E-45 280.3 36.7 273 28-357 50-334 (337)
35 3k26_A Polycomb protein EED; W 100.0 4.1E-42 1.4E-46 289.4 30.6 290 28-357 17-363 (366)
36 3v7d_B Cell division control p 100.0 2.6E-41 8.8E-46 293.6 36.2 275 16-357 113-418 (464)
37 4gga_A P55CDC, cell division c 100.0 1.9E-41 6.6E-46 290.3 34.0 273 31-357 107-392 (420)
38 3i2n_A WD repeat-containing pr 100.0 7.9E-42 2.7E-46 286.7 30.7 277 28-357 17-350 (357)
39 3dwl_C Actin-related protein 2 100.0 9.9E-43 3.4E-47 294.5 25.1 294 28-357 10-376 (377)
40 2pm9_A Protein WEB1, protein t 100.0 8.4E-43 2.9E-47 298.8 24.8 279 28-357 66-411 (416)
41 4ggc_A P55CDC, cell division c 100.0 1.8E-40 6.1E-45 274.0 34.5 273 32-357 28-312 (318)
42 1r5m_A SIR4-interacting protei 100.0 2.3E-41 7.7E-46 290.5 30.1 288 28-357 107-422 (425)
43 2pm7_B Protein transport prote 100.0 9.8E-41 3.4E-45 272.5 32.0 247 64-357 4-282 (297)
44 1got_B GT-beta; complex (GTP-b 100.0 1.4E-40 4.9E-45 276.8 33.5 241 60-357 46-298 (340)
45 4aez_A CDC20, WD repeat-contai 100.0 2.1E-40 7E-45 282.3 34.6 271 31-357 95-377 (401)
46 4g56_B MGC81050 protein; prote 100.0 1.7E-41 5.9E-46 283.9 27.4 270 34-357 10-298 (357)
47 2pm7_B Protein transport prote 100.0 2.7E-40 9.2E-45 269.9 33.7 249 28-315 8-292 (297)
48 2pm9_A Protein WEB1, protein t 100.0 2E-41 6.8E-46 290.2 28.0 276 28-357 11-334 (416)
49 4h5i_A Guanine nucleotide-exch 100.0 2.3E-40 7.8E-45 277.8 33.4 282 29-357 14-340 (365)
50 2hes_X YDR267CP; beta-propelle 100.0 1.1E-40 3.6E-45 276.4 30.7 255 58-357 3-277 (330)
51 4e54_B DNA damage-binding prot 100.0 1.8E-41 6.1E-46 291.7 27.0 275 28-357 118-427 (435)
52 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-41 4.2E-46 296.0 26.2 298 13-357 123-514 (524)
53 1r5m_A SIR4-interacting protei 100.0 1.9E-40 6.6E-45 284.7 31.3 275 28-357 44-358 (425)
54 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.3E-40 7.7E-45 276.1 30.8 254 58-357 4-280 (345)
55 4a11_B DNA excision repair pro 100.0 8.4E-40 2.9E-44 279.3 34.7 296 14-357 33-362 (408)
56 3vl1_A 26S proteasome regulato 100.0 1.2E-40 4E-45 285.8 28.5 271 29-357 56-362 (420)
57 3vl1_A 26S proteasome regulato 100.0 9.2E-40 3.1E-44 280.3 31.5 289 13-357 87-416 (420)
58 3bg1_A Protein SEC13 homolog; 100.0 1.5E-40 5.2E-45 273.7 23.5 244 71-357 12-290 (316)
59 1yfq_A Cell cycle arrest prote 100.0 3.4E-39 1.2E-43 269.1 31.7 265 28-352 10-315 (342)
60 3iz6_a 40S ribosomal protein R 100.0 3.1E-40 1.1E-44 278.9 25.1 252 49-357 47-326 (380)
61 3bg1_A Protein SEC13 homolog; 100.0 5.6E-40 1.9E-44 270.3 25.9 254 28-321 12-306 (316)
62 1gxr_A ESG1, transducin-like e 100.0 3.7E-39 1.3E-43 268.3 30.8 274 28-357 8-293 (337)
63 3frx_A Guanine nucleotide-bind 100.0 4.8E-39 1.6E-43 265.2 30.8 242 59-357 7-264 (319)
64 2pbi_B Guanine nucleotide-bind 100.0 1.2E-38 4E-43 266.5 32.8 241 60-357 55-312 (354)
65 3mmy_A MRNA export factor; mRN 100.0 8.3E-39 2.8E-43 269.3 31.5 284 12-356 27-342 (368)
66 3v7d_B Cell division control p 100.0 5.6E-38 1.9E-42 272.6 37.2 303 11-356 149-459 (464)
67 4ery_A WD repeat-containing pr 100.0 1.8E-38 6.2E-43 261.3 31.7 242 60-357 14-265 (312)
68 3mkq_A Coatomer beta'-subunit; 100.0 6.3E-39 2.1E-43 297.2 32.1 280 15-356 4-298 (814)
69 3sfz_A APAF-1, apoptotic pepti 100.0 2E-38 6.9E-43 306.0 36.3 282 28-357 614-910 (1249)
70 3dw8_B Serine/threonine-protei 100.0 1.4E-38 4.8E-43 275.1 30.4 304 28-356 27-442 (447)
71 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-38 5.9E-43 265.4 29.0 278 28-357 10-334 (351)
72 1erj_A Transcriptional repress 100.0 4.3E-38 1.5E-42 267.0 31.7 241 30-308 124-389 (393)
73 1pgu_A Actin interacting prote 100.0 2.1E-37 7E-42 278.4 35.5 286 28-333 17-349 (615)
74 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-37 3.7E-42 288.8 33.1 319 28-357 150-658 (902)
75 3jrp_A Fusion protein of prote 100.0 1.4E-37 4.9E-42 262.9 31.1 257 15-315 2-294 (379)
76 2xzm_R RACK1; ribosome, transl 100.0 1.5E-37 5.1E-42 259.0 30.6 245 15-309 67-341 (343)
77 3sfz_A APAF-1, apoptotic pepti 100.0 6.1E-38 2.1E-42 302.7 31.9 288 11-357 644-1031(1249)
78 3jrp_A Fusion protein of prote 100.0 1.2E-37 4.2E-42 263.3 29.8 251 60-357 2-284 (379)
79 2aq5_A Coronin-1A; WD40 repeat 100.0 9.2E-38 3.1E-42 266.1 29.1 280 31-357 36-339 (402)
80 2oaj_A Protein SNI1; WD40 repe 100.0 7.4E-38 2.5E-42 289.9 30.1 194 28-269 16-246 (902)
81 1pgu_A Actin interacting prote 100.0 9.4E-37 3.2E-41 274.1 36.1 285 14-357 150-569 (615)
82 1p22_A F-BOX/WD-repeat protein 100.0 2.7E-37 9.1E-42 265.9 28.6 248 12-309 161-415 (435)
83 3vu4_A KMHSV2; beta-propeller 100.0 1.9E-36 6.6E-41 253.2 31.8 286 13-357 8-333 (355)
84 3k26_A Polycomb protein EED; W 100.0 1.4E-36 4.9E-41 255.5 29.5 247 28-307 68-365 (366)
85 3gre_A Serine/threonine-protei 100.0 2.6E-37 8.9E-42 266.4 23.4 252 52-357 47-356 (437)
86 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-35 4.6E-40 274.9 36.5 288 11-357 42-383 (814)
87 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.5E-35 8.5E-40 254.7 35.0 280 28-356 3-387 (450)
88 3dwl_C Actin-related protein 2 100.0 2.4E-37 8.2E-42 261.4 21.9 242 71-356 10-278 (377)
89 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-37 3.7E-42 271.2 20.2 224 85-357 176-425 (524)
90 2j04_A TAU60, YPL007P, hypothe 100.0 7.7E-37 2.6E-41 260.0 24.3 260 28-357 14-294 (588)
91 4aow_A Guanine nucleotide-bind 100.0 9.1E-36 3.1E-40 248.2 29.9 248 57-357 26-283 (340)
92 4aez_A CDC20, WD repeat-contai 100.0 1.6E-35 5.3E-40 252.2 31.5 237 28-310 133-382 (401)
93 1k8k_C P40, ARP2/3 complex 41 100.0 1E-35 3.4E-40 251.0 29.7 242 71-357 7-271 (372)
94 1sq9_A Antiviral protein SKI8; 100.0 6.1E-36 2.1E-40 254.6 27.9 254 62-357 9-319 (397)
95 3ei3_B DNA damage-binding prot 100.0 9.4E-36 3.2E-40 252.2 27.7 252 52-357 57-336 (383)
96 3dm0_A Maltose-binding peripla 100.0 2.2E-35 7.4E-40 268.3 30.8 244 15-307 421-692 (694)
97 4gga_A P55CDC, cell division c 100.0 1.9E-34 6.5E-39 246.9 34.4 247 12-309 133-396 (420)
98 4e54_B DNA damage-binding prot 100.0 7.1E-36 2.4E-40 256.9 25.1 201 71-310 118-329 (435)
99 3jro_A Fusion protein of prote 100.0 7.5E-36 2.6E-40 272.9 26.7 243 28-309 8-286 (753)
100 3lrv_A PRE-mRNA-splicing facto 100.0 6E-36 2.1E-40 249.4 23.5 266 39-356 48-329 (343)
101 4h5i_A Guanine nucleotide-exch 100.0 1E-34 3.4E-39 243.5 30.5 241 28-309 72-344 (365)
102 2xyi_A Probable histone-bindin 100.0 4.9E-35 1.7E-39 251.2 29.1 251 71-357 127-407 (430)
103 3i2n_A WD repeat-containing pr 100.0 6.7E-35 2.3E-39 244.5 27.6 245 28-309 64-354 (357)
104 2xyi_A Probable histone-bindin 100.0 1E-34 3.4E-39 249.3 29.0 245 28-309 127-411 (430)
105 2w18_A PALB2, fancn, partner a 100.0 7.7E-34 2.6E-38 227.3 31.2 292 10-357 21-354 (356)
106 3jro_A Fusion protein of prote 100.0 2.3E-35 8E-40 269.6 25.7 248 63-357 3-282 (753)
107 3odt_A Protein DOA1; ubiquitin 100.0 7E-34 2.4E-38 234.0 31.8 242 12-310 47-298 (313)
108 4gq1_A NUP37; propeller, trans 100.0 3.7E-34 1.3E-38 242.6 29.4 230 85-353 104-383 (393)
109 1yfq_A Cell cycle arrest prote 100.0 2.5E-34 8.6E-39 239.7 27.1 247 70-357 9-279 (342)
110 3dw8_B Serine/threonine-protei 100.0 1E-34 3.6E-39 250.8 24.9 247 71-357 27-370 (447)
111 4ggc_A P55CDC, cell division c 100.0 5.2E-33 1.8E-37 229.3 33.8 249 11-309 52-316 (318)
112 3zwl_B Eukaryotic translation 100.0 3.2E-33 1.1E-37 235.3 33.0 255 11-309 61-347 (369)
113 2aq5_A Coronin-1A; WD40 repeat 100.0 1.8E-33 6.1E-38 239.7 28.0 242 28-310 80-344 (402)
114 3mmy_A MRNA export factor; mRN 100.0 1.3E-32 4.3E-37 231.6 27.5 250 53-357 24-301 (368)
115 4a11_B DNA excision repair pro 100.0 3.9E-32 1.3E-36 231.8 29.7 274 28-357 98-402 (408)
116 3bws_A Protein LP49; two-domai 100.0 1.6E-31 5.4E-36 230.0 33.2 275 15-357 114-429 (433)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.4E-32 1.5E-36 234.4 27.7 268 72-357 4-336 (450)
118 1l0q_A Surface layer protein; 100.0 8E-31 2.7E-35 222.6 33.6 254 40-357 3-272 (391)
119 3vu4_A KMHSV2; beta-propeller 100.0 3.6E-32 1.2E-36 227.3 24.8 241 52-357 3-268 (355)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-32 4.8E-37 229.0 21.7 220 85-357 51-289 (343)
121 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-32 3.7E-37 234.6 18.4 249 28-348 84-349 (588)
122 4gq1_A NUP37; propeller, trans 100.0 2E-31 6.7E-36 226.0 22.9 241 28-307 88-388 (393)
123 1l0q_A Surface layer protein; 100.0 8.7E-29 3E-33 210.0 34.0 286 10-357 18-339 (391)
124 3f3f_A Nucleoporin SEH1; struc 100.0 9.4E-30 3.2E-34 212.3 26.2 268 14-321 47-350 (351)
125 3bws_A Protein LP49; two-domai 100.0 3.6E-28 1.2E-32 209.1 28.4 252 49-357 100-387 (433)
126 2w18_A PALB2, fancn, partner a 100.0 2.7E-28 9.1E-33 195.4 21.2 175 48-263 156-355 (356)
127 1nir_A Nitrite reductase; hemo 100.0 3.5E-25 1.2E-29 194.3 30.7 300 10-357 165-511 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-25 5.3E-30 190.8 27.1 250 28-335 116-410 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.8E-26 2E-30 193.5 22.6 265 29-357 62-384 (415)
130 1nir_A Nitrite reductase; hemo 99.9 8.9E-25 3.1E-29 191.7 29.8 269 37-357 145-455 (543)
131 1ri6_A Putative isomerase YBHE 99.9 2.9E-24 9.8E-29 178.8 28.2 268 40-357 5-305 (343)
132 3u4y_A Uncharacterized protein 99.9 7.3E-24 2.5E-28 175.6 28.6 267 39-357 10-301 (331)
133 2ojh_A Uncharacterized protein 99.9 1.2E-24 4.2E-29 177.1 22.7 249 45-351 18-293 (297)
134 3vgz_A Uncharacterized protein 99.9 1.4E-22 4.7E-27 169.4 31.6 270 28-350 39-334 (353)
135 1pby_B Quinohemoprotein amine 99.9 1.5E-23 5.1E-28 174.0 23.9 260 40-357 2-307 (337)
136 2ecf_A Dipeptidyl peptidase IV 99.9 2.9E-23 9.9E-28 190.4 26.0 275 29-357 36-410 (741)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-21 3.5E-26 167.8 30.7 199 28-266 35-279 (434)
138 3hfq_A Uncharacterized protein 99.9 1.2E-21 4E-26 163.4 30.0 263 49-356 17-313 (347)
139 2z3z_A Dipeptidyl aminopeptida 99.9 1.1E-22 3.9E-27 185.4 24.3 282 7-351 10-378 (706)
140 3o4h_A Acylamino-acid-releasin 99.9 1.6E-22 5.4E-27 180.3 23.8 262 28-357 20-312 (582)
141 1k32_A Tricorn protease; prote 99.9 4.2E-22 1.4E-26 188.8 27.6 276 28-357 202-499 (1045)
142 1ri6_A Putative isomerase YBHE 99.9 3.4E-21 1.2E-25 160.2 29.7 266 28-335 36-335 (343)
143 2z3z_A Dipeptidyl aminopeptida 99.9 6.1E-22 2.1E-26 180.6 26.8 283 30-357 82-432 (706)
144 1xfd_A DIP, dipeptidyl aminope 99.9 1.3E-22 4.4E-27 185.6 21.6 273 30-357 17-390 (723)
145 2ecf_A Dipeptidyl peptidase IV 99.9 7.5E-22 2.6E-26 181.1 25.1 270 30-335 109-437 (741)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.6E-26 166.6 24.8 210 72-309 36-279 (434)
147 1k32_A Tricorn protease; prote 99.9 2.8E-21 9.6E-26 183.1 28.1 292 28-357 51-458 (1045)
148 3scy_A Hypothetical bacterial 99.9 1.3E-19 4.6E-24 151.8 32.6 279 40-356 14-333 (361)
149 3hfq_A Uncharacterized protein 99.9 5.6E-20 1.9E-24 153.2 29.8 255 28-310 38-321 (347)
150 2ojh_A Uncharacterized protein 99.9 3.6E-21 1.2E-25 156.5 20.7 218 87-357 17-255 (297)
151 3u4y_A Uncharacterized protein 99.9 4.9E-20 1.7E-24 152.5 27.5 247 12-309 28-305 (331)
152 3vgz_A Uncharacterized protein 99.9 5.1E-20 1.8E-24 153.8 27.8 235 71-357 39-300 (353)
153 1jmx_B Amine dehydrogenase; ox 99.9 1.5E-20 5.3E-25 156.6 23.2 258 35-357 5-322 (349)
154 1xfd_A DIP, dipeptidyl aminope 99.9 7.7E-20 2.6E-24 167.3 26.4 281 13-335 46-422 (723)
155 3o4h_A Acylamino-acid-releasin 99.9 2E-20 6.7E-25 166.8 20.8 227 71-357 20-273 (582)
156 1pby_B Quinohemoprotein amine 99.9 1.7E-19 5.9E-24 149.5 22.8 243 12-310 19-312 (337)
157 1jof_A Carboxy-CIS,CIS-muconat 99.8 2.1E-18 7.3E-23 144.5 26.1 271 41-357 4-338 (365)
158 1z68_A Fibroblast activation p 99.8 8E-20 2.7E-24 167.0 18.8 270 34-357 20-388 (719)
159 3scy_A Hypothetical bacterial 99.8 1.6E-17 5.4E-22 139.2 30.9 271 29-331 49-360 (361)
160 1z68_A Fibroblast activation p 99.8 7.9E-19 2.7E-23 160.4 24.7 278 32-357 62-440 (719)
161 3pe7_A Oligogalacturonate lyas 99.8 1.8E-18 6.2E-23 146.3 23.7 280 13-356 19-378 (388)
162 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.4E-17 2.5E-21 135.2 25.3 248 29-309 39-342 (365)
163 1q7f_A NHL, brain tumor CG1071 99.8 4.2E-16 1.4E-20 126.1 28.8 236 71-357 28-277 (286)
164 1jmx_B Amine dehydrogenase; ox 99.8 8.3E-17 2.8E-21 134.0 24.0 237 12-310 29-327 (349)
165 3fvz_A Peptidyl-glycine alpha- 99.8 7.2E-16 2.5E-20 127.2 29.3 236 71-357 22-319 (329)
166 3azo_A Aminopeptidase; POP fam 99.8 2.8E-16 9.4E-21 142.3 27.7 277 28-356 22-363 (662)
167 1q7f_A NHL, brain tumor CG1071 99.8 5.3E-15 1.8E-19 119.6 30.8 235 28-309 28-281 (286)
168 2oiz_A Aromatic amine dehydrog 99.8 8E-16 2.7E-20 128.3 25.9 257 47-357 29-331 (361)
169 3c5m_A Oligogalacturonate lyas 99.8 3.7E-17 1.3E-21 138.6 16.8 299 12-356 18-378 (396)
170 2dg1_A DRP35, lactonase; beta 99.7 1.8E-15 6E-20 125.2 26.3 254 29-335 5-292 (333)
171 3fvz_A Peptidyl-glycine alpha- 99.7 3.5E-15 1.2E-19 123.1 26.1 245 29-308 23-322 (329)
172 4a5s_A Dipeptidyl peptidase 4 99.7 7.1E-16 2.4E-20 141.1 23.5 254 28-329 15-370 (740)
173 2oiz_A Aromatic amine dehydrog 99.7 6E-15 2E-19 123.1 26.4 268 11-335 38-360 (361)
174 3dsm_A Uncharacterized protein 99.7 8.4E-15 2.9E-19 120.6 26.9 255 47-357 15-299 (328)
175 2gop_A Trilobed protease; beta 99.7 1.5E-14 5.3E-19 120.2 28.2 250 30-356 15-327 (347)
176 3e5z_A Putative gluconolactona 99.7 1.9E-14 6.4E-19 116.9 25.8 236 60-355 18-282 (296)
177 3pe7_A Oligogalacturonate lyas 99.7 2.2E-15 7.6E-20 127.3 20.5 248 52-357 14-326 (388)
178 3dsm_A Uncharacterized protein 99.7 9.4E-14 3.2E-18 114.4 28.2 235 30-310 44-303 (328)
179 3azo_A Aminopeptidase; POP fam 99.7 3.9E-15 1.3E-19 134.8 21.7 244 62-356 16-319 (662)
180 1qks_A Cytochrome CD1 nitrite 99.7 2.8E-13 9.5E-18 118.8 31.5 266 39-357 167-474 (567)
181 2z2n_A Virginiamycin B lyase; 99.7 2.4E-12 8.3E-17 104.5 35.2 268 28-354 13-290 (299)
182 4a5s_A Dipeptidyl peptidase 4 99.7 7.3E-14 2.5E-18 127.9 28.4 268 33-335 65-428 (740)
183 1rwi_B Serine/threonine-protei 99.7 1.1E-13 3.6E-18 110.9 25.1 230 74-357 25-261 (270)
184 3e5z_A Putative gluconolactona 99.6 3.2E-13 1.1E-17 109.7 26.4 232 28-309 26-287 (296)
185 2bkl_A Prolyl endopeptidase; m 99.6 4.6E-14 1.6E-18 128.3 23.5 270 36-357 76-394 (695)
186 1rwi_B Serine/threonine-protei 99.6 2.9E-13 9.9E-18 108.3 25.2 231 31-309 25-265 (270)
187 2dg1_A DRP35, lactonase; beta 99.6 1.2E-12 4.2E-17 108.1 29.4 234 28-298 43-300 (333)
188 2xdw_A Prolyl endopeptidase; a 99.6 2.7E-13 9.3E-18 123.6 27.1 241 71-357 123-411 (710)
189 1xip_A Nucleoporin NUP159; bet 99.6 1.1E-13 3.9E-18 114.5 20.9 170 31-252 39-231 (388)
190 3no2_A Uncharacterized protein 99.6 8.1E-13 2.8E-17 105.6 24.4 203 81-335 3-225 (276)
191 3no2_A Uncharacterized protein 99.6 8.2E-13 2.8E-17 105.6 24.3 187 39-273 5-203 (276)
192 1qks_A Cytochrome CD1 nitrite 99.6 7.6E-12 2.6E-16 109.7 31.6 299 11-357 184-535 (567)
193 2qc5_A Streptogramin B lactona 99.6 4.5E-11 1.5E-15 97.0 33.7 269 28-356 18-296 (300)
194 2bkl_A Prolyl endopeptidase; m 99.6 4.3E-13 1.5E-17 121.9 22.7 237 28-310 119-399 (695)
195 3c5m_A Oligogalacturonate lyas 99.6 3.2E-14 1.1E-18 120.5 14.4 244 51-357 13-326 (396)
196 2xdw_A Prolyl endopeptidase; a 99.6 1.5E-12 5.2E-17 118.7 26.2 238 28-310 123-416 (710)
197 1yr2_A Prolyl oligopeptidase; 99.6 4E-12 1.4E-16 116.4 27.0 268 37-357 116-438 (741)
198 2gop_A Trilobed protease; beta 99.5 2.9E-12 1E-16 106.4 23.7 215 31-307 60-330 (347)
199 2z2n_A Virginiamycin B lyase; 99.5 5.7E-11 2E-15 96.3 30.6 232 71-357 13-252 (299)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2.6E-11 8.8E-16 99.2 27.3 242 30-309 18-300 (314)
201 1xip_A Nucleoporin NUP159; bet 99.5 1.2E-12 4E-17 108.4 18.4 168 144-335 39-226 (388)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 3.5E-11 1.2E-15 98.4 26.9 239 71-357 16-296 (314)
203 3g4e_A Regucalcin; six bladed 99.5 1.4E-10 4.7E-15 94.1 29.5 219 71-335 11-254 (297)
204 3q7m_A Lipoprotein YFGL, BAMB; 99.5 4.9E-11 1.7E-15 100.2 26.4 267 35-357 99-375 (376)
205 3g4e_A Regucalcin; six bladed 99.5 2.8E-10 9.5E-15 92.3 28.5 221 28-289 11-250 (297)
206 2qc5_A Streptogramin B lactona 99.5 4.9E-10 1.7E-14 90.8 30.1 232 71-357 18-257 (300)
207 2ghs_A AGR_C_1268P; regucalcin 99.4 5.6E-10 1.9E-14 91.7 27.9 211 75-335 51-284 (326)
208 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.1E-10 1E-14 95.4 26.4 259 38-357 52-334 (376)
209 3hrp_A Uncharacterized protein 99.4 3.6E-10 1.2E-14 95.7 26.5 233 30-306 131-408 (409)
210 3hrp_A Uncharacterized protein 99.4 4.8E-10 1.6E-14 94.9 25.9 232 73-356 131-406 (409)
211 1yr2_A Prolyl oligopeptidase; 99.4 6.4E-10 2.2E-14 101.9 28.6 237 28-310 161-443 (741)
212 3sjl_D Methylamine dehydrogena 99.4 6.3E-10 2.1E-14 91.9 24.4 269 39-357 44-360 (386)
213 3dr2_A Exported gluconolactona 99.4 5.9E-10 2E-14 90.7 23.7 232 61-355 36-302 (305)
214 3hxj_A Pyrrolo-quinoline quino 99.4 1.3E-10 4.4E-15 95.8 19.8 180 145-356 139-320 (330)
215 2mad_H Methylamine dehydrogena 99.4 4.6E-09 1.6E-13 87.7 29.2 267 39-357 32-347 (373)
216 3sjl_D Methylamine dehydrogena 99.3 2.2E-09 7.5E-14 88.6 26.0 267 10-333 65-384 (386)
217 2qe8_A Uncharacterized protein 99.3 2.2E-10 7.5E-15 94.9 18.9 263 30-352 17-313 (343)
218 2mad_H Methylamine dehydrogena 99.3 1.7E-08 5.9E-13 84.2 30.4 244 11-310 54-352 (373)
219 3hxj_A Pyrrolo-quinoline quino 99.3 1.1E-10 3.8E-15 96.1 16.5 257 31-357 21-281 (330)
220 1yiq_A Quinohemoprotein alcoho 99.3 1.7E-09 5.7E-14 97.7 24.5 196 39-269 70-342 (689)
221 2ghs_A AGR_C_1268P; regucalcin 99.3 1.3E-08 4.5E-13 83.5 27.5 212 31-288 50-279 (326)
222 3iuj_A Prolyl endopeptidase; h 99.3 9E-09 3.1E-13 93.5 28.8 235 28-310 127-407 (693)
223 3c75_H MADH, methylamine dehyd 99.3 4.6E-09 1.6E-13 88.3 23.9 259 48-357 99-399 (426)
224 1kb0_A Quinohemoprotein alcoho 99.2 3.2E-09 1.1E-13 95.7 24.0 272 39-357 77-504 (677)
225 1yiq_A Quinohemoprotein alcoho 99.2 1.7E-08 5.8E-13 91.2 28.4 291 35-335 117-530 (689)
226 2hz6_A Endoplasmic reticulum t 99.2 6.3E-12 2.2E-16 105.0 5.3 178 82-310 9-194 (369)
227 1kb0_A Quinohemoprotein alcoho 99.2 2.2E-08 7.4E-13 90.3 27.6 288 35-335 124-532 (677)
228 3dr2_A Exported gluconolactona 99.2 1.9E-08 6.5E-13 81.8 24.9 223 28-300 43-299 (305)
229 1npe_A Nidogen, entactin; glyc 99.2 2.6E-07 8.8E-12 73.5 30.9 245 39-335 1-263 (267)
230 3iuj_A Prolyl endopeptidase; h 99.2 5.4E-09 1.8E-13 94.9 23.0 219 71-335 127-383 (693)
231 2hz6_A Endoplasmic reticulum t 99.2 2.8E-11 9.4E-16 101.2 6.1 183 38-270 8-197 (369)
232 3c75_H MADH, methylamine dehyd 99.2 2.9E-08 9.8E-13 83.5 23.9 253 10-318 105-409 (426)
233 2ece_A 462AA long hypothetical 99.1 4.6E-08 1.6E-12 81.5 24.2 193 39-267 95-354 (462)
234 4a2l_A BT_4663, two-component 99.1 1.2E-06 4E-11 81.1 35.9 271 28-335 213-510 (795)
235 3v9f_A Two-component system se 99.1 7.9E-07 2.7E-11 82.0 31.8 266 29-335 312-595 (781)
236 1mda_H Methylamine dehydrogena 99.1 3.1E-08 1.1E-12 81.9 19.6 260 9-332 51-366 (368)
237 2ece_A 462AA long hypothetical 99.0 3.7E-07 1.3E-11 76.2 25.1 225 85-348 99-399 (462)
238 4a2l_A BT_4663, two-component 99.0 4.2E-06 1.4E-10 77.4 34.4 267 32-335 175-464 (795)
239 1mda_H Methylamine dehydrogena 99.0 2.6E-08 8.9E-13 82.3 17.6 251 49-357 47-343 (368)
240 2iwa_A Glutamine cyclotransfer 99.0 4.4E-07 1.5E-11 70.9 23.1 193 144-355 22-232 (266)
241 3v9f_A Two-component system se 99.0 3.3E-06 1.1E-10 78.0 32.4 284 29-357 257-565 (781)
242 2iwa_A Glutamine cyclotransfer 99.0 8.8E-07 3E-11 69.3 24.2 206 11-266 6-238 (266)
243 1kv9_A Type II quinohemoprotei 99.0 1.8E-07 6.1E-12 84.3 22.9 195 39-269 66-337 (668)
244 3nok_A Glutaminyl cyclase; bet 99.0 3.9E-07 1.3E-11 70.4 20.8 185 143-348 55-254 (268)
245 3nol_A Glutamine cyclotransfer 99.0 5.8E-07 2E-11 69.4 21.6 186 144-348 44-244 (262)
246 3mbr_X Glutamine cyclotransfer 98.9 1.5E-06 5.1E-11 66.6 22.9 186 143-348 21-223 (243)
247 2xbg_A YCF48-like protein; pho 98.9 1.4E-05 4.7E-10 65.4 33.1 277 29-357 35-319 (327)
248 1kv9_A Type II quinohemoprotei 98.9 2.8E-06 9.4E-11 76.6 25.8 269 35-310 113-490 (668)
249 2ad6_A Methanol dehydrogenase 98.8 7.2E-06 2.5E-10 72.4 27.7 271 35-310 111-496 (571)
250 3nol_A Glutamine cyclotransfer 98.8 4.4E-06 1.5E-10 64.6 21.8 191 13-255 30-245 (262)
251 3v65_B Low-density lipoprotein 98.8 3.3E-05 1.1E-09 64.7 29.2 228 33-310 80-320 (386)
252 3nok_A Glutaminyl cyclase; bet 98.8 3.2E-06 1.1E-10 65.3 20.7 188 15-254 44-254 (268)
253 2qe8_A Uncharacterized protein 98.8 8.3E-07 2.8E-11 73.3 18.7 223 28-262 65-318 (343)
254 3mbr_X Glutamine cyclotransfer 98.7 2.1E-05 7E-10 60.3 23.1 191 12-254 7-223 (243)
255 3v64_C Agrin; beta propeller, 98.7 6.7E-05 2.3E-09 61.9 30.6 231 30-310 34-277 (349)
256 1fwx_A Nitrous oxide reductase 98.7 1.9E-06 6.6E-11 74.5 19.2 223 85-347 105-405 (595)
257 2fp8_A Strictosidine synthase; 98.7 1.3E-05 4.3E-10 65.6 23.4 237 32-308 21-313 (322)
258 2fp8_A Strictosidine synthase; 98.7 1.6E-05 5.6E-10 64.9 24.1 244 74-356 20-309 (322)
259 1flg_A Protein (quinoprotein e 98.7 3.6E-05 1.2E-09 68.1 27.0 287 36-335 114-541 (582)
260 1fwx_A Nitrous oxide reductase 98.7 2.8E-06 9.6E-11 73.5 19.1 250 85-357 18-358 (595)
261 2ad6_A Methanol dehydrogenase 98.7 1.4E-05 4.6E-10 70.7 23.7 196 39-270 62-340 (571)
262 1w6s_A Methanol dehydrogenase 98.7 4.2E-05 1.4E-09 67.6 26.5 265 42-310 124-505 (599)
263 1ijq_A LDL receptor, low-densi 98.6 0.00013 4.5E-09 59.3 31.6 223 41-310 3-240 (316)
264 1flg_A Protein (quinoprotein e 98.6 4.1E-05 1.4E-09 67.7 23.6 71 38-109 67-144 (582)
265 1k3i_A Galactose oxidase precu 98.5 3.9E-05 1.3E-09 69.3 23.5 260 39-349 198-530 (656)
266 3p5b_L Low density lipoprotein 98.5 0.00027 9.4E-09 59.4 32.2 225 39-310 83-322 (400)
267 1w6s_A Methanol dehydrogenase 98.5 6E-05 2.1E-09 66.7 23.6 197 39-271 62-348 (599)
268 1npe_A Nidogen, entactin; glyc 98.5 0.00022 7.6E-09 56.4 28.8 193 30-269 36-242 (267)
269 2xbg_A YCF48-like protein; pho 98.5 0.00037 1.3E-08 56.9 29.8 235 29-306 79-320 (327)
270 3sov_A LRP-6, low-density lipo 98.4 0.0004 1.4E-08 56.4 26.9 223 41-311 6-241 (318)
271 3qqz_A Putative uncharacterize 98.4 0.00035 1.2E-08 54.3 23.1 198 140-355 24-248 (255)
272 2p4o_A Hypothetical protein; p 98.4 0.0006 2E-08 55.1 28.6 226 10-288 18-263 (306)
273 3v65_B Low-density lipoprotein 98.3 0.00083 2.8E-08 56.2 27.5 189 143-356 116-314 (386)
274 2p4o_A Hypothetical protein; p 98.3 0.00078 2.7E-08 54.4 28.0 218 73-335 32-270 (306)
275 3v64_C Agrin; beta propeller, 98.3 0.0012 4.2E-08 54.3 28.5 188 143-355 73-270 (349)
276 1k3i_A Galactose oxidase precu 98.2 4.5E-05 1.5E-09 68.8 16.1 185 147-350 247-476 (656)
277 3tc9_A Hypothetical hydrolase; 98.2 0.0021 7.2E-08 54.6 24.5 149 74-265 138-301 (430)
278 3m0c_C LDL receptor, low-densi 98.2 0.0044 1.5E-07 56.8 31.5 228 41-311 397-635 (791)
279 1ijq_A LDL receptor, low-densi 98.1 0.0023 8E-08 51.9 29.5 192 143-356 30-234 (316)
280 1n7d_A LDL receptor, low-densi 98.1 3.2E-05 1.1E-09 70.0 12.1 220 42-309 380-615 (699)
281 2xe4_A Oligopeptidase B; hydro 98.1 0.0011 3.8E-08 60.8 22.1 193 144-356 175-394 (751)
282 3qqz_A Putative uncharacterize 98.0 0.0027 9.1E-08 49.4 25.1 201 28-263 25-251 (255)
283 2ism_A Putative oxidoreductase 98.0 0.0042 1.4E-07 51.2 24.5 229 73-335 31-327 (352)
284 2uvk_A YJHT; unknown function, 97.9 0.0041 1.4E-07 51.4 21.4 57 257-314 286-348 (357)
285 3sov_A LRP-6, low-density lipo 97.9 0.0056 1.9E-07 49.7 26.8 190 143-356 35-234 (318)
286 3amr_A 3-phytase; beta-propell 97.9 0.0069 2.4E-07 49.1 21.4 188 153-357 41-260 (355)
287 4hw6_A Hypothetical protein, I 97.9 0.0098 3.3E-07 50.5 23.2 150 74-264 140-303 (433)
288 3p5b_L Low density lipoprotein 97.8 0.011 3.8E-07 49.7 29.3 193 142-356 111-316 (400)
289 4hw6_A Hypothetical protein, I 97.8 0.006 2E-07 51.9 20.0 151 144-307 140-303 (433)
290 2p9w_A MAL S 1 allergenic prot 97.7 0.011 3.7E-07 47.5 25.8 204 73-308 13-265 (334)
291 4a0p_A LRP6, LRP-6, low-densit 97.7 0.023 7.9E-07 50.7 31.8 223 40-311 7-240 (628)
292 2xe4_A Oligopeptidase B; hydro 97.7 0.0068 2.3E-07 55.6 20.4 194 74-306 175-398 (751)
293 3ott_A Two-component system se 97.7 0.031 1.1E-06 51.4 31.0 256 29-335 21-291 (758)
294 1n7d_A LDL receptor, low-densi 97.6 0.00052 1.8E-08 62.2 11.4 190 144-356 407-610 (699)
295 3ii7_A Kelch-like protein 7; p 97.6 0.02 6.8E-07 46.1 25.2 233 39-319 12-282 (306)
296 3a9g_A Putative uncharacterize 97.6 0.024 8.4E-07 46.7 25.1 230 73-335 29-324 (354)
297 3pbp_A Nucleoporin NUP82; beta 97.5 0.0073 2.5E-07 50.1 16.1 143 161-304 40-208 (452)
298 3tc9_A Hypothetical hydrolase; 97.5 0.033 1.1E-06 47.2 26.0 146 32-212 139-300 (430)
299 3m0c_C LDL receptor, low-densi 97.5 0.056 1.9E-06 49.6 29.1 154 143-309 424-590 (791)
300 3ei3_A DNA damage-binding prot 97.5 0.078 2.7E-06 51.0 31.2 240 49-335 493-749 (1158)
301 3ii7_A Kelch-like protein 7; p 97.5 0.029 9.8E-07 45.1 21.6 176 151-350 55-257 (306)
302 2xzh_A Clathrin heavy chain 1; 97.4 0.033 1.1E-06 44.5 28.4 241 39-333 36-312 (365)
303 2vpj_A Kelch-like protein 12; 97.4 0.035 1.2E-06 44.4 23.2 149 153-316 64-238 (301)
304 3s94_A LRP-6, low-density lipo 97.4 0.07 2.4E-06 47.6 27.7 222 41-310 11-245 (619)
305 1bpo_A Protein (clathrin); cla 97.3 0.057 1.9E-06 45.1 28.2 242 39-334 35-312 (494)
306 2xn4_A Kelch-like protein 2; s 97.3 0.047 1.6E-06 43.7 22.6 150 153-316 63-236 (302)
307 3sre_A PON1, serum paraoxonase 97.3 0.055 1.9E-06 44.3 21.4 178 145-335 52-279 (355)
308 3ott_A Two-component system se 97.2 0.13 4.3E-06 47.4 31.2 259 29-335 62-336 (758)
309 2vpj_A Kelch-like protein 12; 97.2 0.057 1.9E-06 43.2 24.9 143 153-309 114-279 (301)
310 3ei3_A DNA damage-binding prot 97.2 0.18 6.2E-06 48.5 35.4 173 162-356 807-995 (1158)
311 2p9w_A MAL S 1 allergenic prot 97.2 0.068 2.3E-06 43.0 20.5 155 145-309 15-216 (334)
312 1zgk_A Kelch-like ECH-associat 97.1 0.078 2.7E-06 42.6 23.6 143 153-309 123-288 (308)
313 1xi4_A Clathrin heavy chain; a 97.1 0.096 3.3E-06 50.6 19.8 228 49-330 49-308 (1630)
314 3kya_A Putative phosphatase; s 97.0 0.13 4.6E-06 44.1 26.5 162 74-265 140-341 (496)
315 4a0p_A LRP6, LRP-6, low-densit 97.0 0.17 6E-06 45.2 27.9 186 143-355 37-232 (628)
316 1zgk_A Kelch-like ECH-associat 96.9 0.12 4E-06 41.6 19.7 70 245-316 168-247 (308)
317 1tl2_A L10, protein (tachylect 96.9 0.079 2.7E-06 39.8 14.4 145 184-335 41-194 (236)
318 1tl2_A L10, protein (tachylect 96.9 0.067 2.3E-06 40.2 13.8 154 73-259 41-204 (236)
319 3s94_A LRP-6, low-density lipo 96.8 0.24 8.2E-06 44.2 24.5 153 143-309 40-203 (619)
320 4asc_A Kelch repeat and BTB do 96.8 0.14 4.7E-06 41.3 18.8 71 244-316 147-228 (315)
321 3pbp_A Nucleoporin NUP82; beta 96.7 0.2 6.7E-06 41.8 17.3 118 144-261 67-208 (452)
322 3qhy_B Beta-lactamase inhibito 96.7 0.16 5.3E-06 40.3 23.3 219 72-356 23-242 (282)
323 3amr_A 3-phytase; beta-propell 96.7 0.18 6.3E-06 40.9 25.4 185 85-307 43-262 (355)
324 2g8s_A Glucose/sorbosone dehyd 96.7 0.21 7.2E-06 41.0 26.5 59 289-354 289-348 (353)
325 4asc_A Kelch repeat and BTB do 96.5 0.24 8.2E-06 39.9 24.2 144 153-309 100-278 (315)
326 2xn4_A Kelch-like protein 2; s 96.5 0.23 8E-06 39.6 25.3 144 152-309 109-277 (302)
327 3a9g_A Putative uncharacterize 96.5 0.17 5.7E-06 41.6 15.4 73 184-266 29-115 (354)
328 1xi4_A Clathrin heavy chain; a 96.4 0.19 6.6E-06 48.7 16.5 185 150-357 73-286 (1630)
329 2xzh_A Clathrin heavy chain 1; 96.3 0.3 1E-05 39.2 26.5 232 39-309 78-333 (365)
330 3das_A Putative oxidoreductase 96.2 0.4 1.4E-05 39.1 27.1 238 71-335 30-320 (347)
331 2woz_A Kelch repeat and BTB do 96.2 0.38 1.3E-05 38.7 20.5 71 244-316 157-238 (318)
332 3sre_A PON1, serum paraoxonase 96.1 0.44 1.5E-05 39.0 24.8 93 161-266 138-253 (355)
333 3kya_A Putative phosphatase; s 96.0 0.65 2.2E-05 39.9 26.6 152 32-212 141-340 (496)
334 2be1_A Serine/threonine-protei 96.0 0.039 1.3E-06 44.8 8.8 193 39-269 10-235 (339)
335 2woz_A Kelch repeat and BTB do 95.8 0.59 2E-05 37.6 22.3 64 245-309 206-288 (318)
336 2be1_A Serine/threonine-protei 95.6 0.27 9.3E-06 39.9 12.2 110 153-272 11-137 (339)
337 2ism_A Putative oxidoreductase 95.5 0.87 3E-05 37.3 23.7 69 31-101 32-114 (352)
338 2uvk_A YJHT; unknown function, 95.4 0.68 2.3E-05 37.9 14.7 50 256-306 168-224 (357)
339 1bpo_A Protein (clathrin); cla 95.4 1 3.5E-05 37.8 27.1 232 39-309 77-332 (494)
340 3qhy_B Beta-lactamase inhibito 94.5 1.4 4.9E-05 34.7 26.2 238 31-334 25-265 (282)
341 2zwa_A Leucine carboxyl methyl 94.3 3.1 0.0001 37.8 22.0 147 153-309 453-636 (695)
342 1cru_A Protein (soluble quinop 94.1 2.5 8.4E-05 36.1 17.7 62 184-253 27-98 (454)
343 3das_A Putative oxidoreductase 93.6 2.5 8.5E-05 34.5 15.6 110 231-348 28-158 (347)
344 2zwa_A Leucine carboxyl methyl 93.0 5.1 0.00017 36.4 17.6 148 153-310 399-579 (695)
345 1cru_A Protein (soluble quinop 90.3 7.9 0.00027 33.0 14.9 100 235-335 27-156 (454)
346 3sbq_A Nitrous-oxide reductase 88.1 13 0.00044 32.6 13.3 82 183-265 322-408 (638)
347 3kci_A Probable E3 ubiquitin-p 86.7 12 0.00043 30.9 28.7 163 144-308 160-345 (389)
348 2g8s_A Glucose/sorbosone dehyd 86.7 12 0.0004 30.6 26.1 56 235-290 271-333 (353)
349 2wg3_C Hedgehog-interacting pr 86.6 14 0.00049 31.5 15.2 56 235-290 14-79 (463)
350 4gq2_M Nucleoporin NUP120; bet 84.9 22 0.00076 33.6 13.9 35 236-270 237-271 (950)
351 4gq2_M Nucleoporin NUP120; bet 83.2 20 0.00069 33.9 12.8 35 144-178 237-273 (950)
352 4d9s_A UVB-resistance protein 81.0 23 0.00079 29.5 36.3 255 30-307 16-304 (406)
353 3f7f_A Nucleoporin NUP120; nuc 80.0 7.7 0.00026 35.0 8.3 36 143-178 222-257 (729)
354 2wg3_C Hedgehog-interacting pr 77.0 34 0.0012 29.2 26.1 28 73-100 14-44 (463)
355 4d9s_A UVB-resistance protein 75.0 35 0.0012 28.4 30.5 255 31-308 69-357 (406)
356 3sbq_A Nitrous-oxide reductase 74.0 22 0.00077 31.2 9.1 73 235-308 323-408 (638)
357 3f7f_A Nucleoporin NUP120; nuc 72.5 28 0.00095 31.6 9.7 30 281-310 223-252 (729)
358 3mvd_K Regulator of chromosome 70.1 47 0.0016 27.7 31.3 255 73-356 75-370 (423)
359 3mvd_K Regulator of chromosome 69.0 50 0.0017 27.6 31.6 255 32-308 77-374 (423)
360 4fhn_B Nucleoporin NUP120; pro 66.8 19 0.00063 35.0 8.1 35 236-270 239-273 (1139)
361 3q6k_A 43.2 kDa salivary prote 57.1 82 0.0028 26.0 20.2 171 163-335 124-336 (381)
362 3kci_A Probable E3 ubiquitin-p 56.1 84 0.0029 25.9 32.9 162 145-307 107-292 (389)
363 4a9v_A PHOX; hydrolase, beta-p 54.4 80 0.0028 27.8 9.0 60 184-253 476-549 (592)
364 4fhn_B Nucleoporin NUP120; pro 52.4 1.7E+02 0.006 28.4 13.9 27 324-357 239-265 (1139)
365 3q6k_A 43.2 kDa salivary prote 48.9 1.1E+02 0.0039 25.2 19.9 118 143-265 152-306 (381)
366 3uc1_A DNA gyrase subunit A; D 48.0 1.1E+02 0.0036 24.7 22.8 168 71-265 93-279 (327)
367 1sqj_A OXG-RCBH, oligoxylogluc 43.5 2E+02 0.0069 26.6 15.5 157 183-355 14-196 (789)
368 3zwu_A Alkaline phosphatase PH 41.3 1.1E+02 0.0039 27.0 8.1 58 185-252 477-548 (592)
369 3uc1_A DNA gyrase subunit A; D 38.3 1.5E+02 0.0053 23.7 20.4 193 153-355 4-223 (327)
370 3b7f_A Glycosyl hydrolase, BNR 35.7 1.8E+02 0.0062 23.8 19.8 66 143-209 55-143 (394)
371 3al9_A Plexin-A2; beta-propell 35.5 1.7E+02 0.0058 25.6 8.2 69 186-260 402-476 (539)
372 3no0_A DNA gyrase subunit A; D 35.4 1.6E+02 0.0053 22.9 21.8 164 71-265 66-246 (276)
373 3no0_A DNA gyrase subunit A; D 33.8 1.7E+02 0.0057 22.8 18.6 153 153-308 81-246 (276)
374 4gz8_A Semaphorin-3A; multi-do 33.7 1.7E+02 0.006 26.3 8.1 61 197-260 432-495 (667)
375 3b7f_A Glycosyl hydrolase, BNR 33.3 2E+02 0.0068 23.5 26.3 53 39-92 22-77 (394)
376 1q47_A Semaphorin 3A; beta pro 33.2 2.4E+02 0.0081 24.4 8.9 74 185-260 405-487 (495)
377 2cn3_A Xyloglucanase, beta-1,4 31.8 3E+02 0.01 25.1 13.3 61 185-253 24-91 (737)
378 1olz_A Semaphorin 4D; developm 31.7 1.9E+02 0.0067 26.0 8.2 56 291-355 417-477 (663)
379 1q47_A Semaphorin 3A; beta pro 27.2 2.1E+02 0.0072 24.7 7.3 58 291-355 423-487 (495)
380 1ukf_A Avirulence protein AVRP 24.6 98 0.0034 22.3 4.0 34 71-104 117-153 (188)
381 3ol2_B Plexin-B1; beta-propell 23.2 3.5E+02 0.012 23.6 8.0 69 186-260 389-461 (528)
382 1olz_A Semaphorin 4D; developm 22.3 3.3E+02 0.011 24.6 7.9 55 197-260 418-477 (663)
383 3mez_B Mannose-specific lectin 21.6 1.7E+02 0.0058 18.8 7.9 58 153-211 25-82 (113)
384 1ukf_A Avirulence protein AVRP 21.2 1.2E+02 0.0042 21.8 3.9 34 140-173 116-152 (188)
385 3nvq_A Semaphorin-7A; beta-pro 20.7 4.2E+02 0.014 23.5 7.9 58 291-355 382-444 (590)
386 1a12_A RCC1, regulator of chro 20.0 3.7E+02 0.013 22.1 33.2 256 30-308 59-365 (413)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-51 Score=349.47 Aligned_cols=272 Identities=25% Similarity=0.441 Sum_probs=248.2
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~ 102 (357)
|.++|++++|+ +++|++|+.| .|+|||+ .+++....+.+ |...|.+++|+|++ |++|+.|++|++||+.+.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~-~~~~~~~~l~~---h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~ 182 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDY-ETGDFERTLKG---HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEET-TTCCCCEEECC---CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC-CCCcEEEEEec---cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99999999999 8999999999 9999999 89999999998 99999999999987 999999999999999877
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNK 180 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 180 (357)
+....+ .+|...|.+++|+| +++++|+.|++|++||+++++++..+ .
T Consensus 183 ~~~~~~------------------------------~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~-~ 231 (410)
T 1vyh_C 183 ECIRTM------------------------------HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF-T 231 (410)
T ss_dssp CEEECC------------------------------CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE-E
T ss_pred ceeEEE------------------------------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE-e
Confidence 543322 28999999999999 89999999999999999999999888 8
Q ss_pred cccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecC--------------
Q 038568 181 AHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD-------------- 245 (357)
Q Consensus 181 ~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------- 245 (357)
.|...+.++.++|++ .|++|+.|+.|++||++ .......+..|...|.+++|+|+
T Consensus 232 ~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 1vyh_C 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA----------TKECKAELREHRHVVECISWAPESSYSSISEATGSET 301 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----------TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-
T ss_pred CCCccEEEEEECCCCCEEEEEcCCCeEEEEECC----------CCceeeEecCCCceEEEEEEcCcccccchhhhccccc
Confidence 899999999999998 59999999999999997 44566778889999999999996
Q ss_pred ------CCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeee
Q 038568 246 ------GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAF 317 (357)
Q Consensus 246 ------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~ 317 (357)
+.+|++|+.|+.|++||++++. ....+.+|...|.++.|+++ +|++|+.||.|++||+.++ +++..
T Consensus 302 ~~~~~~g~~l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---~~~~~ 375 (410)
T 1vyh_C 302 KKSGKPGPFLLSGSRDKTIKMWDVSTGM---CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK---RCMKT 375 (410)
T ss_dssp ------CCEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS---CCCEE
T ss_pred cccCCCCCEEEEEeCCCeEEEEECCCCc---eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---ceEEE
Confidence 6789999999999999999876 44566789999999999876 9999999999999999887 56778
Q ss_pred ecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 318 LEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 318 ~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.+|...|++++|+|+++ +|++|+.||+|++||
T Consensus 376 ~~~h~~~v~~l~~~~~~~-------~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 376 LNAHEHFVTSLDFHKTAP-------YVVTGSVDQTVKVWE 408 (410)
T ss_dssp EECCSSCEEEEEECSSSS-------CEEEEETTSEEEEEC
T ss_pred EcCCCCcEEEEEEcCCCC-------EEEEEeCCCcEEEEe
Confidence 889999999999999998 999999999999997
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.1e-50 Score=335.07 Aligned_cols=287 Identities=17% Similarity=0.263 Sum_probs=249.8
Q ss_pred ceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEe
Q 038568 14 HHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTA 88 (357)
Q Consensus 14 ~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~ 88 (357)
.++.+++++ |.+.|++++|+ +++|++|+.| .|++||. .+++.+..+.. |...|.+++|+|++ |+++
T Consensus 45 ~~~~~~l~g-----H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~-~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~ 115 (340)
T 1got_B 45 MRTRRTLRG-----HLAKIYAMHWGTDSRLLLSASQDGKLIIWDS-YTTNKVHAIPL---RSSWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp CCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTTEEEEEET-TTCCEEEEEEC---SSSCEEEEEECTTSSEEEEE
T ss_pred chhheeecC-----CCCceEEEEECCCCCEEEEEeCCCcEEEEEC-CCCCcceEeec---CCccEEEEEECCCCCEEEEE
Confidence 445566665 99999999999 8999999999 9999999 88888888887 99999999999987 9999
Q ss_pred ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEE
Q 038568 89 HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIW 167 (357)
Q Consensus 89 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iw 167 (357)
+.|+.+++|++.+.+...... ..+.+|...|.++.|.+ +.+++++.|+.|++|
T Consensus 116 ~~d~~v~iw~~~~~~~~~~~~--------------------------~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~w 169 (340)
T 1got_B 116 GLDNICSIYNLKTREGNVRVS--------------------------RELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169 (340)
T ss_dssp ETTCEEEEEETTTCSBSCEEE--------------------------EEEECCSSCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred eCCCeEEEEECccCCCcceeE--------------------------EEecCCCccEEEEEECCCCcEEEEECCCcEEEE
Confidence 999999999998754211111 11238899999999999 889999999999999
Q ss_pred EcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCC
Q 038568 168 NASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG 246 (357)
Q Consensus 168 d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 246 (357)
|+++++.+..+ .+|...|.+++|+|++ .+++|+.|+.|++||++ .......+.+|...|.+++|+|++
T Consensus 170 d~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~----------~~~~~~~~~~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 170 DIETGQQTTTF-TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR----------EGMCRQTFTGHESDINAICFFPNG 238 (340)
T ss_dssp ETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----------TCSEEEEECCCSSCEEEEEECTTS
T ss_pred ECCCCcEEEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECC----------CCeeEEEEcCCcCCEEEEEEcCCC
Confidence 99999998888 7899999999999998 69999999999999998 445667788999999999999999
Q ss_pred CEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCc
Q 038568 247 SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKP 324 (357)
Q Consensus 247 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~ 324 (357)
++|++|+.||.|++||+++.+..... ....+...+.+++|+++ +|++|+.||.|++||+.++ +.+..+.+|..+
T Consensus 239 ~~l~s~s~d~~v~iwd~~~~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---~~~~~~~~h~~~ 314 (340)
T 1got_B 239 NAFATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA---DRAGVLAGHDNR 314 (340)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEE-CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSC
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEE-ccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC---cEeeEeecCCCc
Confidence 99999999999999999987643322 22334457889998876 9999999999999999887 567788899999
Q ss_pred eEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 325 VKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 325 v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++++|+|++. +|+||+.||.|++||
T Consensus 315 v~~~~~s~dg~-------~l~s~s~D~~i~iWd 340 (340)
T 1got_B 315 VSCLGVTDDGM-------AVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEECTTSS-------CEEEEETTSCEEEEC
T ss_pred EEEEEEcCCCC-------EEEEEcCCccEEecC
Confidence 99999999998 999999999999997
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-50 Score=332.42 Aligned_cols=281 Identities=20% Similarity=0.281 Sum_probs=248.0
Q ss_pred ceecccccCCCCCCCccceeEEEEe------cceEEEeeCC-ceEEEeccCCccc--cceeccccCCCCceEEEEEecCc
Q 038568 14 HHCIASLKIPSPDPHHMIISCLAVH------NSLLYAASLN-EINVFDLISDYSH--VDTFSNDLSSSGSVKSITFHITK 84 (357)
Q Consensus 14 ~~~~~~~~~~~g~~h~~~i~~~~~s------~~~l~t~~~d-~i~iw~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~ 84 (357)
+...+.+++ |.+.|++++|+ +++|++|+.| +|+||++ ...+. ...+.+ |...|.+++|+++.
T Consensus 22 g~~~~~~~~-----H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~-~~~~~~~~~~l~g---h~~~v~~~~~~~~~ 92 (321)
T 3ow8_A 22 GILFKQEQA-----HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKW-RDERLDLQWSLEG---HQLGVVSVDISHTL 92 (321)
T ss_dssp EEEEEETTS-----SSSCEEEEEEC-------CEEEEEETTSCEEEEEE-ETTEEEEEEEECC---CSSCEEEEEECSSS
T ss_pred hheeeeccc-----CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEEC-CCCCeeeeeeecc---CCCCEEEEEECCCC
Confidence 344455554 99999999996 4589999999 9999999 65443 345676 99999999999987
Q ss_pred --eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec
Q 038568 85 --IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW 160 (357)
Q Consensus 85 --l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~ 160 (357)
+++++.|++|++||+.+++....+. .|...+.+++|+| ++|++++.
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~~~~~~~~------------------------------~~~~~~~~~~~spdg~~l~~g~~ 142 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENGKQIKSID------------------------------AGPVDAWTLAFSPDSQYLATGTH 142 (321)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEE------------------------------CCTTCCCCEEECTTSSEEEEECT
T ss_pred CEEEEEeCCCcEEEEECCCCCEEEEEe------------------------------CCCccEEEEEECCCCCEEEEEcC
Confidence 9999999999999999886554443 5667888999999 89999999
Q ss_pred CCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeE
Q 038568 161 DRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNA 239 (357)
Q Consensus 161 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 239 (357)
||.|++||+++++....+ ..+...+.+++|+|++ +|++|+.|+.|++||++ ..+.+..+.+|..+|.+
T Consensus 143 dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~----------~~~~~~~~~~h~~~v~~ 211 (321)
T 3ow8_A 143 VGKVNIFGVESGKKEYSL-DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA----------TGKLLHTLEGHAMPIRS 211 (321)
T ss_dssp TSEEEEEETTTCSEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT----------TTEEEEEECCCSSCCCE
T ss_pred CCcEEEEEcCCCceeEEe-cCCCceEEEEEECCCCCEEEEEcCCCeEEEEECC----------CCcEEEEEcccCCceeE
Confidence 999999999999888877 7788899999999999 69999999999999998 45667788899999999
Q ss_pred EEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeee
Q 038568 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAF 317 (357)
Q Consensus 240 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~ 317 (357)
++|+|++++|++|+.|+.|++||+++.. ....+.+|...|.+++|+++ +|++++.|+.|++||++++ +++..
T Consensus 212 l~~spd~~~l~s~s~dg~i~iwd~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~---~~~~~ 285 (321)
T 3ow8_A 212 LTFSPDSQLLVTASDDGYIKIYDVQHAN---LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---TCVHT 285 (321)
T ss_dssp EEECTTSCEEEEECTTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEE
T ss_pred EEEcCCCCEEEEEcCCCeEEEEECCCcc---eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---EEEEE
Confidence 9999999999999999999999999776 45567789999999999876 9999999999999999987 77888
Q ss_pred ecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 318 LEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 318 ~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.+|.+.|.+++|+|++. +|++++.||.|++||
T Consensus 286 ~~~h~~~v~~v~~s~~g~-------~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 286 FFDHQDQVWGVKYNGNGS-------KIVSVGDDQEIHIYD 318 (321)
T ss_dssp ECCCSSCEEEEEECTTSS-------EEEEEETTCCEEEEE
T ss_pred EcCCCCcEEEEEECCCCC-------EEEEEeCCCeEEEEe
Confidence 899999999999999998 999999999999997
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.3e-48 Score=324.32 Aligned_cols=289 Identities=20% Similarity=0.265 Sum_probs=246.5
Q ss_pred ceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEe
Q 038568 14 HHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTA 88 (357)
Q Consensus 14 ~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~ 88 (357)
.+..+++++ |.+.|++++|+ +++|++|+.| +|+|||. .+++....+.. |...|.+++|+|++ |+++
T Consensus 54 ~~~~~~l~g-----H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~-~~~~~~~~~~~---~~~~v~~~~~sp~g~~lasg 124 (354)
T 2pbi_B 54 MKTRRTLKG-----HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDS-FTTNKEHAVTM---PCTWVMACAYAPSGCAIACG 124 (354)
T ss_dssp CCEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TTCCEEEEEEC---SSSCCCEEEECTTSSEEEEE
T ss_pred cEEEEEecC-----CCCeEEEEEECCCCCEEEEEeCCCeEEEEEC-CCCCcceEEec---CCCCEEEEEECCCCCEEEEe
Confidence 345566775 99999999999 8999999999 9999999 88888888887 89999999999987 9999
Q ss_pred ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEE
Q 038568 89 HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKI 166 (357)
Q Consensus 89 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i 166 (357)
+.|+.+++|++.......... ....+..|...|.+++|++ ..|++++.|++|++
T Consensus 125 ~~d~~i~v~~~~~~~~~~~~~------------------------~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~l 180 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNENMAA------------------------KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCAL 180 (354)
T ss_dssp STTSEEEEEECCCCTTCCSGG------------------------GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred eCCCCEEEEEEeccccccccc------------------------cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 999999999986543211000 0012237899999999999 78999999999999
Q ss_pred EEcCcchhhhhccccccccEEEEEEecC--C-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEe
Q 038568 167 WNASNYKCLESVNKAHEDAVNAVVVSDN--G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALN 243 (357)
Q Consensus 167 wd~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 243 (357)
||+++++.+..+ ..|...|.++.++|+ + .|++|+.|+.|++||++ ....+..+..|...|++++|+
T Consensus 181 wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~----------~~~~~~~~~~h~~~v~~v~~~ 249 (354)
T 2pbi_B 181 WDVESGQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR----------SGQCVQAFETHESDVNSVRYY 249 (354)
T ss_dssp EETTTCCEEEEE-ECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT----------TCCEEEEECCCSSCEEEEEEC
T ss_pred EeCCCCeEEEEE-cCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC----------CCcEEEEecCCCCCeEEEEEe
Confidence 999999999888 889999999999874 4 69999999999999998 455677788999999999999
Q ss_pred cCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCC
Q 038568 244 GDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGH 321 (357)
Q Consensus 244 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h 321 (357)
|++++|++|+.|++|++||++..+..... ....+...+.+++|+++ +|++|+.|+.|++||+.++ ..+..+.+|
T Consensus 250 p~~~~l~s~s~D~~v~lwd~~~~~~~~~~-~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~---~~~~~l~~h 325 (354)
T 2pbi_B 250 PSGDAFASGSDDATCRLYDLRADREVAIY-SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG---SRVSILFGH 325 (354)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEE-CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC---SEEEEECCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEE-cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC---ceEEEEECC
Confidence 99999999999999999999977643222 22233456788888765 9999999999999999887 566778899
Q ss_pred cCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 322 EKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 322 ~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.++|++++|+|+++ +|++|+.||+|++|+
T Consensus 326 ~~~v~~l~~spdg~-------~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 326 ENRVSTLRVSPDGT-------AFCSGSWDHTLRVWA 354 (354)
T ss_dssp SSCEEEEEECTTSS-------CEEEEETTSEEEEEC
T ss_pred CCcEEEEEECCCCC-------EEEEEcCCCCEEecC
Confidence 99999999999998 999999999999997
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=324.26 Aligned_cols=276 Identities=17% Similarity=0.167 Sum_probs=225.2
Q ss_pred CccceeEEEEe--cceEEEeeCCceEEEeccCCc-----------cccceeccccCCCCceEEEEEecCc-eEEeecCCe
Q 038568 28 HHMIISCLAVH--NSLLYAASLNEINVFDLISDY-----------SHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCK 93 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~-----------~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~ 93 (357)
|...|.+++|+ |++|++++.+++++||. ... ........ +...|.+++|+|++ |++|+.||+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~-~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~d~~l~~~s~dg~ 104 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGASSLSGRCWAG-SLWLFKDPCAAPNEGFCSAGVQ---TEAGVADLTWVGERGILVASDSGA 104 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEECCSSSCCCE-EEEEESSGGGTTCGGGCSEEEE---ESSCEEEEEEETTTEEEEEETTSE
T ss_pred ccCCEEEEEECCCCCEEEEEeCCceEEeec-eeeeeccccccCCcceeeeeec---cCCCEEEEEEeCCCeEEEEECCCE
Confidence 78889999999 88888887338898874 210 11111112 67789999999988 999999999
Q ss_pred EEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCc
Q 038568 94 IRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASN 171 (357)
Q Consensus 94 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~ 171 (357)
|++||+++++........ ..+|...|++++|+| ++|++|+.|++|++||+++
T Consensus 105 v~lWd~~~~~~~~~~~~~--------------------------~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 105 VELWELDENETLIVSKFC--------------------------KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEEEEECTTSSCEEEEEE--------------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEEeccCCCceeEeecc--------------------------ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 999999988755433311 128999999999999 8999999999999999999
Q ss_pred chhhhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEe--eccccceeEEEEec-CC
Q 038568 172 YKCLESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL--VKHRSTVNALALNG-DG 246 (357)
Q Consensus 172 ~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~-~~ 246 (357)
++++..+ .+|...|.+++|+|++ .|++++.|+.|++||++. .+....+ ..+...+.+++|+| ++
T Consensus 159 ~~~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (344)
T 4gqb_B 159 QVVLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC----------PKPASQIGCSAPGYLPTSLAWHPQQS 227 (344)
T ss_dssp TEEEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS----------SSCEEECC----CCCEEEEEECSSCT
T ss_pred CcEEEEE-cCcCCceEEEEecCCCCCceeeeccccccccccccc----------cceeeeeecceeeccceeeeecCCCC
Confidence 9999998 8999999999999987 488999999999999982 2233333 34556789999999 55
Q ss_pred CEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeecCCcC
Q 038568 247 SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323 (357)
Q Consensus 247 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~ 323 (357)
++|++|+.||.|++||+++++. +..+.+|...|.+++|+|+ +|++|+.|++|+|||++++ + +..+.+|.+
T Consensus 228 ~~l~sg~~dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~---~-~~~~~~H~~ 300 (344)
T 4gqb_B 228 EVFVFGDENGTVSLVDTKSTSC---VLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS---E-LFRSQAHRD 300 (344)
T ss_dssp TEEEEEETTSEEEEEESCC--C---CEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC---E-EEEECCCSS
T ss_pred cceEEeccCCcEEEEECCCCcE---EEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---c-EEEEcCCCC
Confidence 6889999999999999998874 4567789999999999875 7999999999999999986 3 345789999
Q ss_pred ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 324 PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.|++++|+|+++ .+|+|+|.||+|++|+
T Consensus 301 ~V~~v~~sp~~~------~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 301 FVRDATWSPLNH------SLLTTVGWDHQVVHHV 328 (344)
T ss_dssp CEEEEEECSSST------TEEEEEETTSCEEEEE
T ss_pred CEEEEEEeCCCC------eEEEEEcCCCeEEEEE
Confidence 999999999876 2678999999999995
No 6
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2e-48 Score=325.81 Aligned_cols=280 Identities=19% Similarity=0.208 Sum_probs=224.5
Q ss_pred CccceeEEEEe--cceEEEeeC------C-ceEEEeccCCccccceec-cccCCCCceEEEEEecCc-eEEeecCCeEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASL------N-EINVFDLISDYSHVDTFS-NDLSSSGSVKSITFHITK-IFTAHQDCKIRV 96 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~------d-~i~iw~~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~v 96 (357)
|.+.|++++|+ |++||+|+. | .|++|+. .++.+...+. ....|...|.+++|+|++ +++++.||+|++
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~-~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~l 119 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKD-PEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVEL 119 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESS-CC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEEC-CCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEE
Confidence 99999999999 999999997 6 7889988 6554433221 111289999999999988 889999999999
Q ss_pred EecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchh
Q 038568 97 WKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKC 174 (357)
Q Consensus 97 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~ 174 (357)
||+.+++....... ...+|...|.+++|+| ++|++++.|+.|++||++++++
T Consensus 120 Wd~~~~~~~~~~~~--------------------------~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 120 WEILEKESLLVNKF--------------------------AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV 173 (357)
T ss_dssp C--------CCCCE--------------------------EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE
T ss_pred eeccccceeEEEee--------------------------ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 99987764322211 1127899999999999 8999999999999999999999
Q ss_pred hhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecC-CCEEEE
Q 038568 175 LESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD-GSLLFS 251 (357)
Q Consensus 175 ~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~ 251 (357)
+..+ ..|...|.+++|+|++ .+++++.|+.|++||++..+ .........+...+.+++|+|+ +.+|++
T Consensus 174 ~~~~-~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~--------~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 174 LKSY-NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK--------PATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEEE-CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS--------CBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred EEEE-cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc--------eeeeeeeccccccccchhhhhcccceEEE
Confidence 9888 8899999999999987 58999999999999998211 1112233456778999999996 568999
Q ss_pred EecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEE
Q 038568 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSL 328 (357)
Q Consensus 252 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~ 328 (357)
|+.|+.|++||+++++. ...+.+|...|.+++|+++ +|++|+.|++|+|||++++ +.+. ..+|.+.|+++
T Consensus 245 g~~d~~i~~wd~~~~~~---~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~---~~~~-~~~H~~~V~~v 317 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDS---AQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS---EVFR-DLSHRDFVTGV 317 (357)
T ss_dssp EESSSCEEEEESSCGGG---CEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC---EEEE-ECCCSSCEEEE
T ss_pred eecccceeEEECCCCcE---eEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC---cEeE-ECCCCCCEEEE
Confidence 99999999999998774 4566789999999999864 7999999999999999987 4444 34799999999
Q ss_pred EEee-CCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 329 VAIS-SSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 329 ~~~~-~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|+| ++. +|+|+|.||+|++||
T Consensus 318 afsP~d~~-------~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 318 AWSPLDHS-------KFTTVGWDHKVLHHH 340 (357)
T ss_dssp EECSSSTT-------EEEEEETTSCEEEEE
T ss_pred EEeCCCCC-------EEEEEcCCCeEEEEE
Confidence 9998 677 999999999999996
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.6e-49 Score=331.26 Aligned_cols=299 Identities=15% Similarity=0.218 Sum_probs=245.6
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--e
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--I 85 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l 85 (357)
.....+.++|++ |.+.|++++|+ +++|++|+.| +|+|||. .+++....+.. |...|.+++|+|++ |
T Consensus 53 ~~~~~~~~~l~g-----H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~-~~~~~~~~~~~---h~~~v~~~~~s~~g~~l 123 (380)
T 3iz6_a 53 PTDLVCCRTLQG-----HSGKVYSLDWTPEKNWIVSASQDGRLIVWNA-LTSQKTHAIKL---HCPWVMECAFAPNGQSV 123 (380)
T ss_dssp CCCCEEEEEECC-----CSSCEEEEEECTTSSCEEEEETTSEEEEEET-TTTEEEEEEEC---CCTTCCCCEECTTSSEE
T ss_pred cceeEEeecccc-----cccEEEEEEEcCCCCEEEEEeCCCeEEEEEC-CCCccceEEec---CCCCEEEEEECCCCCEE
Confidence 445667778886 99999999999 8999999999 9999999 88898999988 99999999999987 9
Q ss_pred EEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCC
Q 038568 86 FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDR 162 (357)
Q Consensus 86 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg 162 (357)
++++.|+.+++|++.+........ .....+.+|...|.++.|.| ..|++|+.|+
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~-----------------------~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~ 180 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNM-----------------------PVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ 180 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSS-----------------------TTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS
T ss_pred EEeeCCCcEEEEECCCCccccCCc-----------------------cceeeccCCCcceEEEEEecCCCCEEEEECCCC
Confidence 999999999999997543111000 00123348999999999998 5799999999
Q ss_pred eEEEEEcCcchhhhhcc----ccccccEEEEEEec-CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccc
Q 038568 163 SFKIWNASNYKCLESVN----KAHEDAVNAVVVSD-NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~----~~~~~~v~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
+|++||+++++.+..+. .+|...|.++.+++ ++ .|++|+.|+.|++||++. ....+..+.+|...
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~---------~~~~~~~~~~h~~~ 251 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI---------TSRAVRTYHGHEGD 251 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT---------TCCCCEEECCCSSC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC---------CCcceEEECCcCCC
Confidence 99999999988776542 46888999999987 44 699999999999999871 23456678899999
Q ss_pred eeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeec----cCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc
Q 038568 237 VNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEAL----WGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 237 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~ 310 (357)
|.+++|+|++++|++|+.||+|++||++++......... ..+...+.+++|+++ +|++|+.||.|++||+.+++
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 999999999999999999999999999988754433221 112234778888765 99999999999999998874
Q ss_pred ceeeeee-ecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 311 CYRCMAF-LEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 311 ~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
....+.. ..+|.+.|++++|+|++. +|+||+.||+|++||
T Consensus 332 ~~~~~~~~~~~h~~~v~~l~~s~dg~-------~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 332 MVLNLGTLQNSHEGRISCLGLSSDGS-------ALCTGSWDKNLKIWA 372 (380)
T ss_dssp EEEEECCSCSSCCCCCCEEEECSSSS-------EEEEECTTSCEEEEE
T ss_pred eEEEEecccCCCCCceEEEEECCCCC-------EEEEeeCCCCEEEEe
Confidence 3322222 268999999999999999 999999999999996
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-47 Score=312.73 Aligned_cols=280 Identities=19% Similarity=0.253 Sum_probs=238.7
Q ss_pred eecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH 89 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~ 89 (357)
+..+++++ |.+.|++++|+ +++|++|+.| .|++||+ ++++.+..+.. |..+|.+++|+|++ |++|+
T Consensus 4 ~~~~~~~~-----h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~s 74 (304)
T 2ynn_A 4 DIKKTFSN-----RSDRVKGIDFHPTEPWVLTTLYSGRVELWNY-ETQVEVRSIQV---TETPVRAGKFIARKNWIIVGS 74 (304)
T ss_dssp CCEEEEEE-----ECSCEEEEEECSSSSEEEEEETTSEEEEEET-TTTEEEEEEEC---CSSCEEEEEEEGGGTEEEEEE
T ss_pred eeEEeecC-----CCCceEEEEECCCCCEEEEEcCCCcEEEEEC-CCCceeEEeec---cCCcEEEEEEeCCCCEEEEEC
Confidence 45566776 99999999999 9999999999 9999999 88888999988 99999999999987 99999
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEE
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIW 167 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iw 167 (357)
.|++|++||+.+++....+. +|...|.+++|+| .+|++|+.|++|++|
T Consensus 75 ~d~~i~vwd~~~~~~~~~~~------------------------------~h~~~v~~~~~~~~~~~l~sgs~D~~v~lW 124 (304)
T 2ynn_A 75 DDFRIRVFNYNTGEKVVDFE------------------------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124 (304)
T ss_dssp TTSEEEEEETTTCCEEEEEE------------------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred CCCEEEEEECCCCcEEEEEe------------------------------CCCCcEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 99999999999887554432 8999999999999 899999999999999
Q ss_pred EcCcchhh-hhccccccccEEEEEEecC-C-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec
Q 038568 168 NASNYKCL-ESVNKAHEDAVNAVVVSDN-G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244 (357)
Q Consensus 168 d~~~~~~~-~~~~~~~~~~v~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 244 (357)
|++++..+ ..+ .+|...|.+++|+|+ + .|++|+.|+.|++||++. .. ........|...+..+.|+|
T Consensus 125 d~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~------~~---~~~~~~~~~~~~v~~~~~~~ 194 (304)
T 2ynn_A 125 NWENNWALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ------ST---PNFTLTTGQERGVNYVDYYP 194 (304)
T ss_dssp EGGGTTEEEEEE-CCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC------SS---CSEEEECCCTTCEEEEEECC
T ss_pred ECCCCcchhhhh-cccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC------CC---ccceeccCCcCcEEEEEEEE
Confidence 99887444 444 789999999999994 4 699999999999999972 11 11222335667899999987
Q ss_pred --CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecC
Q 038568 245 --DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEG 320 (357)
Q Consensus 245 --~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 320 (357)
++.+|++|+.|+.|++||+++++ ....+.+|...|.++.|+|+ +|++|+.||.|++||++++ +.+..+..
T Consensus 195 ~~~~~~l~s~s~D~~i~iWd~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~---~~~~~~~~ 268 (304)
T 2ynn_A 195 LPDKPYMITASDDLTIKIWDYQTKS---CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---KVEKTLNV 268 (304)
T ss_dssp STTCCEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---CEEEEECC
T ss_pred cCCCCEEEEEcCCCeEEEEeCCCCc---cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC---ceeeeccC
Confidence 77899999999999999999876 45667789999999999887 8999999999999999987 67778889
Q ss_pred CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEE
Q 038568 321 HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIK 354 (357)
Q Consensus 321 h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~ 354 (357)
|...+.+++|+|++. ..++++|+.||.+.
T Consensus 269 ~~~~~~~~~~~~~~~-----~~~~asg~~~g~~~ 297 (304)
T 2ynn_A 269 GLERSWCIATHPTGR-----KNYIASGFDNGFTV 297 (304)
T ss_dssp SSSSEEEEEECTTCG-----GGCEEEEETTEEEE
T ss_pred CCccEEEEEECCCCC-----ceEEEEecCCceEE
Confidence 999999999999874 12588888777543
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-47 Score=316.62 Aligned_cols=296 Identities=20% Similarity=0.272 Sum_probs=236.2
Q ss_pred cceecccccCCCCCCCcc-ceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eE
Q 038568 13 KHHCIASLKIPSPDPHHM-IISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IF 86 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~-~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~ 86 (357)
..++++++++ |.+ .|++++|+ |++||+|+.| .|+|||+ +++..........+|...|.+++|+|++ |+
T Consensus 4 ~~~~~~~~~~-----h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~-~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~ 77 (345)
T 3fm0_A 4 SLVLLGRVPA-----HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGT-EGDSWICKSVLSEGHQRTVRKVAWSPCGNYLA 77 (345)
T ss_dssp CEEEEEEECC-----STTSCEEEEEECTTSSCEEEEETTSCEEEEEE-ETTEEEEEEEECSSCSSCEEEEEECTTSSEEE
T ss_pred cEEEeeeecC-----CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEc-CCCcceeeeeeccccCCcEEEEEECCCCCEEE
Confidence 3456777775 887 99999999 9999999999 9999999 6654332211111399999999999987 99
Q ss_pred EeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeE
Q 038568 87 TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSF 164 (357)
Q Consensus 87 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i 164 (357)
+++.|+++++|++..+... .+..+ .+|...|.+++|+| ++|++++.|+.|
T Consensus 78 s~s~D~~v~iw~~~~~~~~-~~~~~---------------------------~~h~~~v~~v~~sp~~~~l~s~s~D~~v 129 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFE-CVTTL---------------------------EGHENEVKSVAWAPSGNLLATCSRDKSV 129 (345)
T ss_dssp EEETTSCEEEEEECCC-EE-EEEEE---------------------------CCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEECCCcEEEEEccCCCeE-EEEEc---------------------------cCCCCCceEEEEeCCCCEEEEEECCCeE
Confidence 9999999999998765421 22222 38999999999999 899999999999
Q ss_pred EEEEcCcch---hhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEE
Q 038568 165 KIWNASNYK---CLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL 240 (357)
Q Consensus 165 ~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 240 (357)
++||++++. ++..+ ..|...|.+++|+|++ +|++++.|+.|++||.+ . ........+.+|...|+++
T Consensus 130 ~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~------~--~~~~~~~~~~~h~~~v~~l 200 (345)
T 3fm0_A 130 WVWEVDEEDEYECVSVL-NSHTQDVKHVVWHPSQELLASASYDDTVKLYREE------E--DDWVCCATLEGHESTVWSL 200 (345)
T ss_dssp EEEEECTTSCEEEEEEE-CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE------T--TEEEEEEEECCCSSCEEEE
T ss_pred EEEECCCCCCeEEEEEe-cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec------C--CCEEEEEEecCCCCceEEE
Confidence 999998754 34445 6889999999999998 69999999999999987 1 1234556788999999999
Q ss_pred EEecCCCEEEEEecCCeEEEEecccCCc------------eeeeeeccC-CccceEEEeecCc--eEEEecCCCeEEEee
Q 038568 241 ALNGDGSLLFSGGCDRWIVVWERERDHR------------MVFAEALWG-HTGALLCLINVGD--LLASGSADRTVRIWQ 305 (357)
Q Consensus 241 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~------------~~~~~~~~~-~~~~v~~~~~~~~--~l~~~~~dg~i~vw~ 305 (357)
+|+|++++|++++.|++|++||...... ......+.+ |...|.+++|+++ .|++++.|+.|++|+
T Consensus 201 ~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 201 AFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999999999753221 112223333 8889999999876 999999999999999
Q ss_pred CCCCcce------eeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 306 RGKENCY------RCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 306 ~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
....... .......+|...|++++|+|++. .+|+||+.||.|++||
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~------~~laS~s~Dg~v~~W~ 332 (345)
T 3fm0_A 281 EDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP------GLLASCSDDGEVAFWK 332 (345)
T ss_dssp ECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST------TEEEEEETTSCEEEEE
T ss_pred eCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc------eEEEEcCCCCcEEEEE
Confidence 8754211 11233468999999999999873 1899999999999996
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-47 Score=314.96 Aligned_cols=295 Identities=18% Similarity=0.274 Sum_probs=229.2
Q ss_pred cceecccccCCCCCCCccceeEEEEecceEEEeeCC-ceEEEeccCCc--cccceeccccCCCCceEEEEEecCc--eEE
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLN-EINVFDLISDY--SHVDTFSNDLSSSGSVKSITFHITK--IFT 87 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~--l~~ 87 (357)
..++++++++ |.++|++++|++++||+|+.| .|++||+ ..+ +....+.. ..|...|.+++|+|++ |++
T Consensus 3 ~~~~~~~~~~-----h~~~v~~~~~s~~~las~~~D~~i~lw~~-~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~las 75 (330)
T 2hes_X 3 SINLIKSLKL-----YKEKIWSFDFSQGILATGSTDRKIKLVSV-KYDDFTLIDVLDE-TAHKKAIRSVAWRPHTSLLAA 75 (330)
T ss_dssp CCEEEEEEEC-----CSSCEEEEEEETTEEEEEESSSCEEEEEC-SSSCCEEEEEECT-TCCCSCEEEEEECTTSSEEEE
T ss_pred ccccceeecc-----CCCceeeeccCCCEEEEEcCCCEEEEEEe-cCCCeEEEEEEec-CCccCCEEEEEECCCCCEEEE
Confidence 4556777886 999999999997799999999 9999999 653 33444421 1289999999999987 999
Q ss_pred eecCCeEEEEecCCccc----eeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC
Q 038568 88 AHQDCKIRVWKITASRQ----HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD 161 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d 161 (357)
++.|++|++||+..... ...+ ..+.+|...|.+++|+| ++|++|+.|
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~---------------------------~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLL---------------------------AIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEE---------------------------EEEC----CEEEEEECTTSCEEEEEETT
T ss_pred EeCCCcEEEEEcccCcCccccceeE---------------------------EEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 99999999999864321 1111 12248999999999999 899999999
Q ss_pred CeEEEEEcCcc----hhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccc
Q 038568 162 RSFKIWNASNY----KCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236 (357)
Q Consensus 162 g~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
++|++||++.. +++..+ ..|...|.+++|+|++ +|++++.|+.|++||.+. ....++..+.+|...
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~--------~~~~~~~~~~~h~~~ 199 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVL-QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD--------DDWECVAVLNGHEGT 199 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSC
T ss_pred CEEEEEeccCCCCCeEEEEEe-ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC--------CCeeEEEEccCCCCc
Confidence 99999999532 345556 7899999999999998 699999999999999861 123567788899999
Q ss_pred eeEEEEecC--CCEEEEEecCCeEEEEecccCCc-----eeeeeeccC-CccceEEEeecCc-eEEEecCCCeEEEeeCC
Q 038568 237 VNALALNGD--GSLLFSGGCDRWIVVWERERDHR-----MVFAEALWG-HTGALLCLINVGD-LLASGSADRTVRIWQRG 307 (357)
Q Consensus 237 v~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~~~~-~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~ 307 (357)
|.+++|+|+ +.+|++|+.|++|++||++.... ......+.+ |...|.+++|+++ +|++++.||.|++|+..
T Consensus 200 v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 200 VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEE
T ss_pred EEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcC
Confidence 999999998 67899999999999999976421 112333444 8899999999866 89999999999999998
Q ss_pred CCcceeeeeeecCCcC-ceEEEEEee--CCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 308 KENCYRCMAFLEGHEK-PVKSLVAIS--SSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 308 ~~~~~~~~~~~~~h~~-~v~~~~~~~--~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+++.........+|.. .|++++|+| ++. +|+||+.||.|++||
T Consensus 280 ~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~-------~las~s~Dg~v~~W~ 325 (330)
T 2hes_X 280 DGEWKVFAKRALCHGVYEINVVKWLELNGKT-------ILATGGDDGIVNFWS 325 (330)
T ss_dssp TTEEEEEEEESCTTTTSCEEEEEEC-----C-------CEEEEETTSEEEEEE
T ss_pred CCceEEEeccccccccceEEEEEEecCCCce-------EEEEecCCCcEEEEE
Confidence 7632122233467887 899999999 566 899999999999996
No 11
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3e-46 Score=307.76 Aligned_cols=283 Identities=22% Similarity=0.387 Sum_probs=241.9
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eE
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IF 86 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~ 86 (357)
+..+...++.+ |.+.|++++|+ +++|++|+.| .|++|+. .+++....+.+ |...|.+++|+|++ |+
T Consensus 11 ~~~~~~~~~~g-----h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~-~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~ 81 (312)
T 4ery_A 11 PNYALKFTLAG-----HTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISG---HKLGISDVAWSSDSNLLV 81 (312)
T ss_dssp CCCEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEET-TTCCEEEEECC---CSSCEEEEEECTTSSEEE
T ss_pred CCceeEEEEcc-----cCCcEEEEEECCCCCEEEEeeCCCeEEEEeC-CCcccchhhcc---CCCceEEEEEcCCCCEEE
Confidence 44566667775 99999999999 8999999999 9999999 88888888887 99999999999987 99
Q ss_pred EeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeE
Q 038568 87 TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSF 164 (357)
Q Consensus 87 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i 164 (357)
+++.|+.|++||+++++....+. +|...|.+++|+| +++++++.|+.|
T Consensus 82 s~~~d~~i~vwd~~~~~~~~~~~------------------------------~~~~~v~~~~~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 82 SASDDKTLKIWDVSSGKCLKTLK------------------------------GHSNYVFCCNFNPQSNLIVSGSFDESV 131 (312)
T ss_dssp EEETTSEEEEEETTTCCEEEEEE------------------------------CCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EECCCCEEEEEECCCCcEEEEEc------------------------------CCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999999999999876544332 7889999999999 899999999999
Q ss_pred EEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEe-eccccceeEEEE
Q 038568 165 KIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALAL 242 (357)
Q Consensus 165 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 242 (357)
++||+++++.+..+ ..|...|.+++|+|++ .|++++.|+.|++||++ ..+.+..+ ..+..++..++|
T Consensus 132 ~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~----------~~~~~~~~~~~~~~~~~~~~~ 200 (312)
T 4ery_A 132 RIWDVKTGKCLKTL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA----------SGQCLKTLIDDDNPPVSFVKF 200 (312)
T ss_dssp EEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----------TCCEEEEECCSSCCCEEEEEE
T ss_pred EEEECCCCEEEEEe-cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC----------CCceeeEEeccCCCceEEEEE
Confidence 99999999988888 7889999999999998 69999999999999997 22333333 346678999999
Q ss_pred ecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEE--Eee---cCceEEEecCCCeEEEeeCCCCcceeeeee
Q 038568 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC--LIN---VGDLLASGSADRTVRIWQRGKENCYRCMAF 317 (357)
Q Consensus 243 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~--~~~---~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~ 317 (357)
+|++++|++++.|+.|++||+++++. ...+.+|.....+ ..+ .+.+|++|+.||.|++||+.++ +.+..
T Consensus 201 ~~~~~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~---~~~~~ 274 (312)
T 4ery_A 201 SPNGKYILAATLDNTLKLWDYSKGKC---LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK---EIVQK 274 (312)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTTEE---EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC---CEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcE---EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc---hhhhh
Confidence 99999999999999999999998764 3445556544322 122 2449999999999999999987 66788
Q ss_pred ecCCcCceEEEEEeeCCCCCCCCeEEEEEcC--CCCeEEecC
Q 038568 318 LEGHEKPVKSLVAISSSSSASNGIVSIGSGS--LNGEIKVWD 357 (357)
Q Consensus 318 ~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~--~dg~v~~wd 357 (357)
+.+|...|.+++|+|+++ +|++++ .|+.|++|+
T Consensus 275 ~~~h~~~v~~~~~~p~~~-------~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 275 LQGHTDVVISTACHPTEN-------IIASAALENDKTIKLWK 309 (312)
T ss_dssp ECCCSSCEEEEEECSSSS-------EEEEEECTTTCCEEEEE
T ss_pred hhccCCcEEEEeecCcCC-------ceEEEEccCCccEEEec
Confidence 899999999999999998 899886 699999995
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.3e-46 Score=307.90 Aligned_cols=279 Identities=22% Similarity=0.362 Sum_probs=233.7
Q ss_pred cceecccccCCCCCCCccceeEEEEe---cceEEEeeCC-ceEEEeccCC-----ccccceeccccCCCCceEEEEEecC
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVH---NSLLYAASLN-EINVFDLISD-----YSHVDTFSNDLSSSGSVKSITFHIT 83 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~-----~~~~~~~~~~~~~~~~v~~l~~~~~ 83 (357)
...+..+|++ |.+.|++++|+ +++|++|+.| +|++|++ .. +.++..+.+ |...|.+++|+|+
T Consensus 6 ~~~l~~~l~g-----H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~-~~~~~~~~~~~~~~~~---h~~~v~~~~~s~d 76 (319)
T 3frx_A 6 VLVLRGTLEG-----HNGWVTSLATSAGQPNLLLSASRDKTLISWKL-TGDDQKFGVPVRSFKG---HSHIVQDCTLTAD 76 (319)
T ss_dssp EEEEEEEECC-----CSSCEEEEEECSSCTTEEEEEETTSEEEEEEE-EEETTEEEEEEEEEEC---CSSCEEEEEECTT
T ss_pred EEEEEEEEcc-----ccceEEEEEccCCCccEEEEecCCccEEEecC-CCCCccccccceEEeC---CcccEEEEEECCC
Confidence 4556667776 99999999998 4799999999 9999998 43 234667787 9999999999998
Q ss_pred c--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe
Q 038568 84 K--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS 159 (357)
Q Consensus 84 ~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~ 159 (357)
+ |++++.|++|++||+.+++....+. +|...|.+++|+| .++++|+
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~~~~------------------------------~h~~~v~~~~~~~~~~~l~s~s 126 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQRFV------------------------------GHKSDVMSVDIDKKASMIISGS 126 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEE------------------------------CCSSCEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeEEEc------------------------------cCCCcEEEEEEcCCCCEEEEEe
Confidence 7 9999999999999999886544332 8999999999999 8999999
Q ss_pred cCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-------eEEEEeCCCeEEEEEccccccccccccceeeeeEeec
Q 038568 160 WDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-------VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK 232 (357)
Q Consensus 160 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
.|++|++||++ ++++..+ .+|...+.++.+.|.. .+++++.|+.|++||++ .......+.+
T Consensus 127 ~D~~i~vwd~~-~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~----------~~~~~~~~~~ 194 (319)
T 3frx_A 127 RDKTIKVWTIK-GQCLATL-LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLN----------QFQIEADFIG 194 (319)
T ss_dssp TTSCEEEEETT-SCEEEEE-CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETT----------TTEEEEEECC
T ss_pred CCCeEEEEECC-CCeEEEE-eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECC----------cchhheeecC
Confidence 99999999996 4556666 7899999999999843 59999999999999998 4556677889
Q ss_pred cccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc
Q 038568 233 HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 233 ~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~ 310 (357)
|...|.+++|+|++++|++++.||.|++||+.+.+... .+. +...+.+++|+|+ +|++++. +.+++|++....
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~---~~~-~~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~ 269 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY---TLS-AQDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQY 269 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE---EEE-CCSCEEEEEECSSSSEEEEEET-TEEEEEEETTEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE---Eec-CCCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCe
Confidence 99999999999999999999999999999999876443 333 3467999999988 6666654 559999998752
Q ss_pred ceeeeeee--------cCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 311 CYRCMAFL--------EGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 311 ~~~~~~~~--------~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+..+ ..|...+.+++|+|+++ +|++|+.||.|++||
T Consensus 270 ---~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-------~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 270 ---LVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-------TLFAGYTDNVIRVWQ 314 (319)
T ss_dssp ---EEEEECCCCTTCCGGGCCCEEEEEECTTSS-------EEEEEETTSCEEEEE
T ss_pred ---eeeccCccccccccCcCcceeEEEECCCCC-------EEEEeecCceEEEEE
Confidence 23322 23567899999999999 999999999999997
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-46 Score=316.09 Aligned_cols=283 Identities=26% Similarity=0.449 Sum_probs=231.0
Q ss_pred CccceeEEEEe--cceEEEeeCCceEEEeccCCccccceecccc---------------CCCCceEEEEEecCc--eEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLNEINVFDLISDYSHVDTFSNDL---------------SSSGSVKSITFHITK--IFTA 88 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~---------------~~~~~v~~l~~~~~~--l~~~ 88 (357)
|.+.|+|++|+ |++||+|+.+.+++|++ .+++.+..+.... .+...|.+++|+|++ |+++
T Consensus 63 h~~~V~~v~fspdg~~la~g~~~~v~i~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGCNKTTQVYRV-SDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEECBSCEEEEET-TTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEcCCcEEEEEe-cCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 99999999999 89999987449999999 8888777776411 012349999999987 9999
Q ss_pred ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEE
Q 038568 89 HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKI 166 (357)
Q Consensus 89 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i 166 (357)
+.|++|++||+.+++....+ .+|...|.+++|+| .+|++++.|++|++
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~------------------------------~~h~~~v~~~~~~p~~~~l~s~s~d~~v~i 191 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMIL------------------------------QGHEQDIYSLDYFPSGDKLVSGSGDRTVRI 191 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEE------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cCCCeEEEEECCCCcEEEEE------------------------------ccCCCCEEEEEEcCCCCEEEEecCCCcEEE
Confidence 99999999999887544332 28999999999999 89999999999999
Q ss_pred EEcCcchhhhhccccccccEEEEEEec-CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEe-------eccccce
Q 038568 167 WNASNYKCLESVNKAHEDAVNAVVVSD-NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL-------VKHRSTV 237 (357)
Q Consensus 167 wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-------~~~~~~v 237 (357)
||++++++...+ .+...+.+++++| ++ +|++|+.|+.|++||++. ...+..+ .+|...|
T Consensus 192 wd~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~----------~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 192 WDLRTGQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET----------GFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EETTTTEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT----------CCEEEEEC------CCCSSCE
T ss_pred EECCCCeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC----------CcEEEeecccccCCCCCCCCE
Confidence 999998887776 4667899999999 66 699999999999999872 2222222 5789999
Q ss_pred eEEEEecCCCEEEEEecCCeEEEEecccCCce---------eeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeC
Q 038568 238 NALALNGDGSLLFSGGCDRWIVVWERERDHRM---------VFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQR 306 (357)
Q Consensus 238 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~ 306 (357)
.+++|+|++++|++|+.|+.|++||+++.... .....+.+|...|.+++++++ +|++|+.|+.|++||+
T Consensus 260 ~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 260 YSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999999999999999999764321 123456689999999999876 9999999999999999
Q ss_pred CCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 307 GKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 307 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.++ +.+..+.+|...|.+++|++... ...++.+|+||+.||+|++||
T Consensus 340 ~~~---~~~~~l~~h~~~v~~v~~~~~~~-~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 340 KSG---NPLLMLQGHRNSVISVAVANGSS-LGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp TTC---CEEEEEECCSSCEEEEEECSSCT-TCTTCEEEEEEETTSEEEEEE
T ss_pred CCC---eEEEEECCCCCCEEEEEecCCcC-cCCCCCEEEEECCCCcEEECc
Confidence 987 56778899999999999987431 111223899999999999996
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.9e-46 Score=310.26 Aligned_cols=285 Identities=16% Similarity=0.254 Sum_probs=230.8
Q ss_pred ccceecccccCCCCCCCccceeEEEE-----e---cceEEEeeCC-ceEEEeccCCc-------cccceeccccCCCCce
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAV-----H---NSLLYAASLN-EINVFDLISDY-------SHVDTFSNDLSSSGSV 75 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~-----s---~~~l~t~~~d-~i~iw~~~~~~-------~~~~~~~~~~~~~~~v 75 (357)
+..++..+|++ |.+.|++++| + +++|++|+.| +|++||+ ... .+...+.+ |...|
T Consensus 9 ~~~~~~~~l~g-----H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~-~~~~~~~~~~~~~~~l~~---h~~~V 79 (343)
T 2xzm_R 9 IQVVKRGILEG-----HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKL-YEEEQNGYFGIPHKALTG---HNHFV 79 (343)
T ss_dssp EEEEEEEEEEC-----CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEE-CSSCCSSBSEEEEEEECC---CSSCE
T ss_pred eEeeeeeeecc-----chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEEC-CcCCcccccccccchhcc---CCCce
Confidence 45567777886 9999999999 3 7899999999 9999999 542 34556776 99999
Q ss_pred EEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-
Q 038568 76 KSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ- 152 (357)
Q Consensus 76 ~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 152 (357)
.+++|+|++ +++++.|++|++||+++++....+. +|...|.+++|+|
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~------------------------------~h~~~v~~v~~sp~ 129 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV------------------------------GHQSEVYSVAFSPD 129 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE------------------------------CCCSCEEEEEECSS
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc------------------------------CCCCcEEEEEECCC
Confidence 999999987 8999999999999999886544332 8999999999999
Q ss_pred -CeEEEEecCCeEEEEEcCcchhhhhc-cccccccEEEEEEecCC-----------eEEEEeCCCeEEEEEccccccccc
Q 038568 153 -GLMYSVSWDRSFKIWNASNYKCLESV-NKAHEDAVNAVVVSDNG-----------VVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 153 -~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~-----------~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
++|++++.|+.|++||+......... ...|...+.+++|+|++ +|++++.|+.|++||..
T Consensus 130 ~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~------- 202 (343)
T 2xzm_R 130 NRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN------- 202 (343)
T ss_dssp TTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-------
T ss_pred CCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-------
Confidence 79999999999999999743222111 13688899999999975 59999999999999954
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCC
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSAD 298 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d 298 (357)
......+.+|...|.+++|+|++++|++|+.||.|++||+....... ..+ .+...|.+++|+|+ .+++++.|
T Consensus 203 ----~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~--~~~-~~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 203 ----FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ--REF-DAGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp ----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS--EEE-ECSSCEEEEEECSSSCEEEEEES
T ss_pred ----CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc--eee-cCCCcEEEEEECCCCCEEEEECC
Confidence 34556778899999999999999999999999999999995443221 111 24556999999988 45556678
Q ss_pred CeEEEeeCCCCcceeeeeee-----------cCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 299 RTVRIWQRGKENCYRCMAFL-----------EGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 299 g~i~vw~~~~~~~~~~~~~~-----------~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.|++|++.+++... +..+ .+|...|++++|+|+++ +|++|+.||.|++||
T Consensus 276 ~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-------~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 276 QGVKIFNLMTQSKAP-VCTIEAEPITKAEGQKGKNPQCTSLAWNALGK-------KLFAGFTDGVIRTFS 337 (343)
T ss_dssp SCEEEEESSSCCSCS-EEECCCCSGGGBTTBCCSCCCEEEEEECSSSC-------CEEEEETTSEEEEEE
T ss_pred CCEEEEEeCCCCCCc-eEEeecCcchhhhhhcCCCCceEEEEECCCCC-------eEEEecCCceEEEEE
Confidence 889999998764322 1122 27888999999999998 999999999999996
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-45 Score=330.00 Aligned_cols=322 Identities=19% Similarity=0.323 Sum_probs=243.3
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccc----cCCCCceEEEEEecCc
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSND----LSSSGSVKSITFHITK 84 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~----~~~~~~v~~l~~~~~~ 84 (357)
.+.++.+++.+ |.+.|++++|+ +++||+|+.| +|++||. .+++.+..+... .+|.+.|.+++|+|++
T Consensus 178 ~~~~~~~~l~~-----H~~~V~~v~fspdg~~las~s~D~~i~lwd~-~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 178 PPFKFKSTFGE-----HTKFVHSVRYNPDGSLFASTGGDGTIVLYNG-VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp TTBEEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEET-TTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred CCCeEeeeecc-----ccCceEEEEECCCCCEEEEEECCCcEEEEEC-CCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 34566777775 99999999999 8999999999 9999999 888777776310 0299999999999987
Q ss_pred --eEEeecCCeEEEEecCCccceeeeeecCccccceee---------eecCCCeEEEecc----cccccccccccEEEEE
Q 038568 85 --IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIR---------SVLPNNYVTVRRH----KKRLWLEHWDAVSDLV 149 (357)
Q Consensus 85 --l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~ 149 (357)
|++++.|++|++||+.+++....+............ ....++.+.+... ....+.+|...|.+++
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence 999999999999999988765554322211111111 1111222222111 1134568999999999
Q ss_pred Eec--CeEEEEecCCeEEEEEcCcchhhhhccc-----------------------------------------------
Q 038568 150 VKQ--GLMYSVSWDRSFKIWNASNYKCLESVNK----------------------------------------------- 180 (357)
Q Consensus 150 ~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------------------------------- 180 (357)
|+| ++|++++.|++|++||+.+++....+..
T Consensus 332 ~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~ 411 (611)
T 1nr0_A 332 SSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLS 411 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECS
T ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecC
Confidence 999 8999999999999999887654322100
Q ss_pred ----------------------------------cccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccccccccccee
Q 038568 181 ----------------------------------AHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHM 225 (357)
Q Consensus 181 ----------------------------------~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 225 (357)
.+...+.+++|+|++ +|++|+.|+.|++||+. .. ...
T Consensus 412 ~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~------~~--~~~ 483 (611)
T 1nr0_A 412 SQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLS------GA--SVS 483 (611)
T ss_dssp SCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEE------TT--EEE
T ss_pred CCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEcc------CC--cee
Confidence 012346788899998 58999999999999986 11 111
Q ss_pred eeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEE
Q 038568 226 LVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRI 303 (357)
Q Consensus 226 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~v 303 (357)
.... .+|...|++++|+|++++|++++.|++|++||+.+...........+|...|.+++|+|+ +|++|+.|++|++
T Consensus 484 ~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~l 562 (611)
T 1nr0_A 484 EVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 562 (611)
T ss_dssp EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEE
Confidence 2233 679999999999999999999999999999999873332111123459999999999987 9999999999999
Q ss_pred eeCCCCcceeeeeeecCC-cCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 304 WQRGKENCYRCMAFLEGH-EKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 304 w~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
||+.++... .+..+.+| ...|++++|+|++ .|++++.||+|++||
T Consensus 563 W~~~~~~~~-~~~~~~~h~~~~v~~v~fs~d~--------~l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 563 WNMNKPSDH-PIIIKGAHAMSSVNSVIWLNET--------TIVSAGQDSNIKFWN 608 (611)
T ss_dssp EETTCTTSC-CEEETTSSTTSCEEEEEEEETT--------EEEEEETTSCEEEEE
T ss_pred EECCCcccc-cchhhccCcccCeeEEEEcCCC--------EEEEecCCCCEEEEe
Confidence 999876321 12567789 8999999999997 599999999999996
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.3e-45 Score=303.58 Aligned_cols=287 Identities=18% Similarity=0.279 Sum_probs=235.8
Q ss_pred cccceecccccCCCCCCCccceeEEEEe---cceEEEeeCC-ceEEEeccCCcc-----ccceeccccCCCCceEEEEEe
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH---NSLLYAASLN-EINVFDLISDYS-----HVDTFSNDLSSSGSVKSITFH 81 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~-----~~~~~~~~~~~~~~v~~l~~~ 81 (357)
....++..+|++ |.+.|++|+|+ +++||||+.| +|+|||+ .+.+ +...+.+ |...|.+++|+
T Consensus 25 ~~~~~l~~tL~G-----H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~-~~~~~~~~~~~~~l~~---h~~~V~~~~~s 95 (340)
T 4aow_A 25 TEQMTLRGTLKG-----HNGWVTQIATTPQFPDMILSASRDKTIIMWKL-TRDETNYGIPQRALRG---HSHFVSDVVIS 95 (340)
T ss_dssp -CEEEEEEEECC-----CSSCEEEEEECTTCTTEEEEEETTSCEEEEEE-CCSSSCSEEEEEEECC---CSSCEEEEEEC
T ss_pred CCceEEEEEECC-----ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEEC-CCCCcccceeeEEEeC---CCCCEEEEEEC
Confidence 344566667876 99999999998 5799999999 9999998 5433 4556676 99999999999
Q ss_pred cCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEE
Q 038568 82 ITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYS 157 (357)
Q Consensus 82 ~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~ 157 (357)
|++ |++++.|+.|++|+........... .+...+..+.+.+ .++++
T Consensus 96 ~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~l~s 145 (340)
T 4aow_A 96 SDGQFALSGSWDGTLRLWDLTTGTTTRRFV------------------------------GHTKDVLSVAFSSDNRQIVS 145 (340)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE------------------------------CCSSCEEEEEECTTSSCEEE
T ss_pred CCCCEEEEEcccccceEEeecccceeeeec------------------------------CCCCceeEEEEeecCcccee
Confidence 987 9999999999999998775443332 5566778888888 89999
Q ss_pred EecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC---eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccc
Q 038568 158 VSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG---VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHR 234 (357)
Q Consensus 158 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357)
++.|+.+++||+............|...+..+++++++ .+++++.|+.|++||++ ..+....+.+|.
T Consensus 146 ~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~----------~~~~~~~~~~h~ 215 (340)
T 4aow_A 146 GSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA----------NCKLKTNHIGHT 215 (340)
T ss_dssp EETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT----------TTEEEEEECCCS
T ss_pred ecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC----------CCceeeEecCCC
Confidence 99999999999976554444336788999999999876 47899999999999998 456677888999
Q ss_pred cceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCccee
Q 038568 235 STVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYR 313 (357)
Q Consensus 235 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~ 313 (357)
.+|++++|+|++++|++|+.||.|++||+++.+.+. .+. +...+.++.++++ .+++++.|+.|++||++++....
T Consensus 216 ~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~---~~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 216 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY---TLD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE---EEE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee---eec-CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence 999999999999999999999999999999876443 333 4467889999887 78888899999999998763221
Q ss_pred e------eeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 314 C------MAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 314 ~------~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
. .....+|...|++++|+|+++ +|++|+.||.|++||
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~-------~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 292 ELKQEVISTSSKAEPPQCTSLAWSADGQ-------TLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EECCC-------CCCCCEEEEEECTTSS-------EEEEEETTSCEEEEE
T ss_pred eccccceeeeccCCCCCEEEEEECCCCC-------EEEEEeCCCEEEEEe
Confidence 1 123457889999999999998 999999999999997
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.1e-44 Score=322.42 Aligned_cols=304 Identities=15% Similarity=0.161 Sum_probs=246.6
Q ss_pred CccceeEEEEe--cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCcc
Q 038568 28 HHMIISCLAVH--NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASR 103 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~ 103 (357)
+.+.+.+++|+ |++||+++.+.|++|++ .+++....+.+ |...|++++|+|++ |++|+.|++|+|||+.+++
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~~~v~l~~~-~~~~~~~~~~~---h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPV-GSLTDTEIYTE---HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 92 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEETTEEEEEET-TCSSCCEEECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred ccCceeEEeeCCCCCEEEeCCCCEEEEecC-CCcccCeEecC---CCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc
Confidence 67889999999 89999988559999999 88888889988 99999999999997 9999999999999997554
Q ss_pred ceeeeeecCccccce-eeeecCCCeEEE-ec---------------ccccccccccccEEEEEEec--C-eEEEEecCCe
Q 038568 104 QHQLVSTLPTVKDRL-IRSVLPNNYVTV-RR---------------HKKRLWLEHWDAVSDLVVKQ--G-LMYSVSWDRS 163 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~ 163 (357)
.... ..+......+ ...+.+++...+ .. .....+.+|...|.+++|+| . .|++++.|++
T Consensus 93 ~~~~-~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 93 HILK-TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp CCEE-EEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred ceee-EeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCe
Confidence 3211 1122121111 223333332221 11 11245678999999999999 3 6999999999
Q ss_pred EEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEee-------cccc
Q 038568 164 FKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV-------KHRS 235 (357)
Q Consensus 164 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~-------~~~~ 235 (357)
|++||..+++++..+ .+|...|.+++|+|++ +|++++.|+.|++||+. ..+....+. +|..
T Consensus 172 v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~----------~g~~~~~~~~~~~~~~~h~~ 240 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV----------DGTKTGVFEDDSLKNVAHSG 240 (611)
T ss_dssp EEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----------TCCEEEECBCTTSSSCSSSS
T ss_pred EEEEECCCCeEeeee-ccccCceEEEEECCCCCEEEEEECCCcEEEEECC----------CCcEeeeeccccccccccCC
Confidence 999999988888888 8899999999999999 69999999999999987 223333342 7999
Q ss_pred ceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeee
Q 038568 236 TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCM 315 (357)
Q Consensus 236 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 315 (357)
.|.+++|+|++++|++++.|++|++||+++++....+.....+......+.|.++.+++++.|+.+++|+..++ +..
T Consensus 241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~---~~~ 317 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELG---SID 317 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTT---EEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCC---Ccc
Confidence 99999999999999999999999999999877554443323345566778888889999999999999999886 466
Q ss_pred eeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 316 AFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 316 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
..+.+|...|++++|+|+++ +|++++.||+|++||
T Consensus 318 ~~~~gh~~~v~~l~~spdg~-------~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 318 QVRYGHNKAITALSSSADGK-------TLFSADAEGHINSWD 352 (611)
T ss_dssp EEECCCSSCEEEEEECTTSS-------EEEEEETTSCEEEEE
T ss_pred eEEcCCCCCEEEEEEeCCCC-------EEEEEeCCCcEEEEE
Confidence 77889999999999999998 999999999999997
No 18
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.9e-44 Score=302.95 Aligned_cols=281 Identities=16% Similarity=0.175 Sum_probs=240.6
Q ss_pred eecccccCCCCCCCccceeEEEEecceEEEeeCC-ceEEEeccCCcc------ccceeccccCCCCceEEEEEecC----
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVHNSLLYAASLN-EINVFDLISDYS------HVDTFSNDLSSSGSVKSITFHIT---- 83 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~------~~~~~~~~~~~~~~v~~l~~~~~---- 83 (357)
++.+.+++ |.+.|++++|+.++|++|+.| .|++|++ .+++ .+..+.+ |...|.+++|+|+
T Consensus 7 ~~~~~~~~-----h~~~i~~~~~~~~~l~s~~~dg~i~iw~~-~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~ 77 (397)
T 1sq9_A 7 ATANAGKA-----HDADIFSVSACNSFTVSCSGDGYLKVWDN-KLLDNENPKDKSYSHFV---HKSGLHHVDVLQAIERD 77 (397)
T ss_dssp EEEEESSC-----SSSCEEEEEECSSEEEEEETTSEEEEEES-BCCTTCCGGGGEEEEEC---CTTCEEEEEEEEEEETT
T ss_pred hhhhhhhh-----hhcCeEEEEecCCeEEEEcCCCEEEEEEC-CCcccccCCCcceEEec---CCCcEEEEEEecccccC
Confidence 34455554 999999999999999999999 9999999 7766 6777777 9999999999987
Q ss_pred ----c-eEEeecCCeEEEEecCCccc-----eeeeeecCccccceeeeecCCCeEEEecccccccccc-----cccEEEE
Q 038568 84 ----K-IFTAHQDCKIRVWKITASRQ-----HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEH-----WDAVSDL 148 (357)
Q Consensus 84 ----~-l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~ 148 (357)
. |++++.|+.|++||+.+++. ...+. .| ...|.++
T Consensus 78 g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~v~~~ 127 (397)
T 1sq9_A 78 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD------------------------------LLDSDMKKHSFWAL 127 (397)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC------------------------------CSCTTGGGSCEEEE
T ss_pred CccccEEEEEcCCCCEEEEEccCCcccccccceeec------------------------------ccccccCCCcEEEE
Confidence 4 99999999999999987764 22222 45 5899999
Q ss_pred EEe----c--Ce-EEEEecCCeEEEEEcCc------chhhh-----hcc------ccccccEEEEEEecCCeEEEEeCCC
Q 038568 149 VVK----Q--GL-MYSVSWDRSFKIWNASN------YKCLE-----SVN------KAHEDAVNAVVVSDNGVVYTGSADG 204 (357)
Q Consensus 149 ~~~----~--~~-l~~~~~dg~i~iwd~~~------~~~~~-----~~~------~~~~~~v~~~~~~~~~~l~~~~~d~ 204 (357)
+|+ | .+ |++++.||.|++||+++ ++.+. .+. ..|...+.+++|+|++.+++++.|+
T Consensus 128 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg 207 (397)
T 1sq9_A 128 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNG 207 (397)
T ss_dssp EEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTS
T ss_pred EEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCC
Confidence 999 8 77 99999999999999998 77776 552 2378889999999988888999999
Q ss_pred eEEEEEccccccccccccceeeeeEeec---c---ccceeEEEEecCCCEEEEEecC---CeEEEEecccCCceeeeeec
Q 038568 205 RIRVWERSVVDHNKERKSRHMLVTTLVK---H---RSTVNALALNGDGSLLFSGGCD---RWIVVWERERDHRMVFAEAL 275 (357)
Q Consensus 205 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~ 275 (357)
.|++||++ ....+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++. ...+
T Consensus 208 ~i~i~d~~----------~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~---~~~~ 274 (397)
T 1sq9_A 208 TVQISELS----------TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER---IGSL 274 (397)
T ss_dssp EEEEEETT----------TTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE---EEEE
T ss_pred cEEEEECC----------CCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc---ccee
Confidence 99999998 3456677777 8 9999999999999999999999 9999999998764 4445
Q ss_pred cC-------------CccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeec------CC-------------
Q 038568 276 WG-------------HTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLE------GH------------- 321 (357)
Q Consensus 276 ~~-------------~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~------~h------------- 321 (357)
.+ |...|.+++|+++ +|++++.||.|++||++++ +.+..+. +|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK---ERITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT---EEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC---ceeEEEecccCcccchhhhhcccccccc
Confidence 55 8999999999866 9999999999999999987 5566676 77
Q ss_pred --cCceEEEEEeeCC----------CCCCCCeEEEEEcCCCCeEEecC
Q 038568 322 --EKPVKSLVAISSS----------SSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 322 --~~~v~~~~~~~~~----------~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
..+|++++|+|++ + +|++++.||.|++||
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~-------~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNE-------SLCCVCLDRSIRWFR 392 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSC-------EEEEEETTTEEEEEE
T ss_pred ccCCceeEEEeccccccccccccccc-------eEEEecCCCcEEEEE
Confidence 9999999999997 6 999999999999996
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.2e-44 Score=292.45 Aligned_cols=243 Identities=25% Similarity=0.346 Sum_probs=212.4
Q ss_pred cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 60 SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 60 ~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
+..+++.+ |.+.|++++|+|++ |++++.||+|++||+.+++....+.
T Consensus 4 ~~~~~~~~---h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~---------------------------- 52 (304)
T 2ynn_A 4 DIKKTFSN---RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ---------------------------- 52 (304)
T ss_dssp CCEEEEEE---ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE----------------------------
T ss_pred eeEEeecC---CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee----------------------------
Confidence 44567887 99999999999987 9999999999999999876544332
Q ss_pred cccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccc
Q 038568 138 WLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVV 214 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 214 (357)
.|..+|.+++|++ ++|++|+.|++|++||+++++.+..+ ..|...|.+++|+|++ +|++|+.|+.|++||++.
T Consensus 53 --~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~- 128 (304)
T 2ynn_A 53 --VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN- 128 (304)
T ss_dssp --CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG-
T ss_pred --ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC-
Confidence 7888999999999 89999999999999999999999888 8899999999999998 699999999999999971
Q ss_pred ccccccccceeeeeEeeccccceeEEEEec-CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC----
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNG-DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG---- 289 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 289 (357)
.......+.+|...|.+++|+| ++.+|++|+.|+.|++||+++...... ...+|...+..+.+.+
T Consensus 129 --------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ 198 (304)
T 2ynn_A 129 --------NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT--LTTGQERGVNYVDYYPLPDK 198 (304)
T ss_dssp --------TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE--EECCCTTCEEEEEECCSTTC
T ss_pred --------CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce--eccCCcCcEEEEEEEEcCCC
Confidence 2245567788999999999999 678999999999999999987664322 2335667777777754
Q ss_pred ceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 290 DLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 290 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+|++|+.|+.|++||++++ +++..+.+|...|++++|+|+++ +|++|+.||+|++||
T Consensus 199 ~~l~s~s~D~~i~iWd~~~~---~~~~~~~~h~~~v~~~~~~p~~~-------~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 199 PYMITASDDLTIKIWDYQTK---SCVATLEGHMSNVSFAVFHPTLP-------IIISGSEDGTLKIWN 256 (304)
T ss_dssp CEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSS-------EEEEEETTSCEEEEE
T ss_pred CEEEEEcCCCeEEEEeCCCC---ccceeeCCCCCCEEEEEECCCCC-------EEEEEcCCCeEEEEE
Confidence 38999999999999999987 77888999999999999999998 999999999999997
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-43 Score=316.78 Aligned_cols=276 Identities=25% Similarity=0.436 Sum_probs=240.0
Q ss_pred cceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEE
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFT 87 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~ 87 (357)
..++++.+.+ |...|.+++|+ +++|++++.| .|++||. .. +.+..+.+ |...|.+++|+|++ |++
T Consensus 292 ~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~-~~-~~~~~~~~---~~~~v~~~~~s~~g~~l~~ 361 (577)
T 2ymu_A 292 NGQLLQTLTG-----HSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NG-QHLQTLTG---HSSSVWGVAFSPDGQTIAS 361 (577)
T ss_dssp TSCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEET-TS-CEEEEECC---CSSCEEEEEECTTSSEEEE
T ss_pred CCcEEEEEec-----CCCCeEEEEECCCCCEEEEEeCCCeEEEEeC-CC-CeeEEEeC---CCCCEEEEEECCCCCEEEE
Confidence 3455666665 99999999999 8999999999 9999998 54 55667776 99999999999987 999
Q ss_pred eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEE
Q 038568 88 AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFK 165 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~ 165 (357)
++.|+.|++||.. ++....+ .+|...|.+++|+| ++|++++.|+.|+
T Consensus 362 ~~~dg~v~~~~~~-~~~~~~~------------------------------~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 362 ASDDKTVKLWNRN-GQLLQTL------------------------------TGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp EETTSEEEEEETT-CCEEEEE------------------------------ECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EeCCCEEEEEcCC-CCEEEEe------------------------------cCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 9999999999964 3322222 27889999999999 8999999999999
Q ss_pred EEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec
Q 038568 166 IWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244 (357)
Q Consensus 166 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 244 (357)
+||. +++.+..+ ..|...|.+++|+|++ +|++++.|+.|++||.. .+.+..+.+|...|.+++|+|
T Consensus 411 ~~~~-~~~~~~~~-~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-----------~~~~~~~~~~~~~v~~~~~sp 477 (577)
T 2ymu_A 411 LWNR-NGQLLQTL-TGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-----------GQLLQTLTGHSSSVRGVAFSP 477 (577)
T ss_dssp EECT-TCCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-----------SCEEEEEECCSSCEEEEEECT
T ss_pred EEeC-CCCEEEEe-cCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-----------CCEEEEEcCCCCCEEEEEEcC
Confidence 9995 56667777 7899999999999998 69999999999999975 345677889999999999999
Q ss_pred CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCc
Q 038568 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~ 322 (357)
++++|++++.|+.|++||.. ++ ....+.+|...|.+++|+|+ +|++++.||.|++||.. + +++..+.+|.
T Consensus 478 d~~~las~~~d~~i~iw~~~-~~---~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~---~~~~~~~~h~ 549 (577)
T 2ymu_A 478 DGQTIASASDDKTVKLWNRN-GQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHS 549 (577)
T ss_dssp TSCEEEEEETTSEEEEEETT-SC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S---CEEEEEECCS
T ss_pred CCCEEEEEeCCCEEEEEcCC-CC---EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-C---CEEEEEcCCC
Confidence 99999999999999999964 44 45567789999999999877 99999999999999964 3 5678889999
Q ss_pred CceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 323 KPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 323 ~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++|++++|+||++ +|+|++.||+|++||
T Consensus 550 ~~v~~~~fs~dg~-------~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 550 SSVWGVAFSPDGQ-------TIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECTTSS-------CEEEEETTSCEEEEC
T ss_pred CCEEEEEEcCCCC-------EEEEEeCCCEEEEeC
Confidence 9999999999998 999999999999998
No 21
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-43 Score=287.78 Aligned_cols=280 Identities=22% Similarity=0.320 Sum_probs=242.1
Q ss_pred ccceecccccCCCCCCCccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEE
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFT 87 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~ 87 (357)
...++.+++++ |.+.|++++|. +++|++|+.| .|++||+ .+++....+.. |...|.+++|+|++ |++
T Consensus 6 ~~~~~~~~l~~-----h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~ 76 (313)
T 3odt_A 6 TGYQLSATLKG-----HDQDVRDVVAVDDSKVASVSRDGTVRLWSK-DDQWLGTVVYT---GQGFLNSVCYDSEKELLLF 76 (313)
T ss_dssp CCCEEEEEECC-----CSSCEEEEEEEETTEEEEEETTSEEEEEEE-SSSEEEEEEEE---CSSCEEEEEEETTTTEEEE
T ss_pred ccHHHHHHhhC-----CCCCcEEEEecCCCEEEEEEcCCcEEEEEC-CCCEEEEEeec---CCccEEEEEECCCCCEEEE
Confidence 34577778886 99999999998 9999999999 9999999 88888888887 99999999999987 999
Q ss_pred eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEE
Q 038568 88 AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIW 167 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iw 167 (357)
++.|+.+++|++........+..+ ..|...|.++.|.++++++++.||.|++|
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~~---------------------------~~~~~~i~~~~~~~~~l~~~~~d~~i~~~ 129 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYTL---------------------------IGHQGNVCSLSFQDGVVISGSWDKTAKVW 129 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CEE---------------------------CCCSSCEEEEEEETTEEEEEETTSEEEEE
T ss_pred ecCCCeEEEEEeeecCCCCcccch---------------------------hhcccCEEEEEecCCEEEEEeCCCCEEEE
Confidence 999999999999876433333222 27899999999988999999999999999
Q ss_pred EcCcchhhhhccccccccEEEEEEec-CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeec-cccceeEEEEec
Q 038568 168 NASNYKCLESVNKAHEDAVNAVVVSD-NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNG 244 (357)
Q Consensus 168 d~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 244 (357)
| .++.+..+ ..|...+.++.+.| ++ .+++++.|+.|++||.. .....+.. |...+.+++|+|
T Consensus 130 d--~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~------------~~~~~~~~~~~~~i~~~~~~~ 194 (313)
T 3odt_A 130 K--EGSLVYNL-QAHNASVWDAKVVSFSENKFLTASADKTIKLWQND------------KVIKTFSGIHNDVVRHLAVVD 194 (313)
T ss_dssp E--TTEEEEEE-ECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT------------EEEEEECSSCSSCEEEEEEEE
T ss_pred c--CCcEEEec-ccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC------------ceEEEEeccCcccEEEEEEcC
Confidence 9 55666666 78999999999988 55 79999999999999954 33444555 889999999999
Q ss_pred CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecCCcC
Q 038568 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEK 323 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~ 323 (357)
++. +++++.||.|++||+++++ ....+.+|...+.+++|+++ .|++++.||.|++||++++ +.+..+..|..
T Consensus 195 ~~~-~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~ 267 (313)
T 3odt_A 195 DGH-FISCSNDGLIKLVDMHTGD---VLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENG---SLKQVITLPAI 267 (313)
T ss_dssp TTE-EEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTC---CEEEEEECSSS
T ss_pred CCe-EEEccCCCeEEEEECCchh---hhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCC---ceeEEEeccCc
Confidence 988 9999999999999999877 44556689999999999988 8999999999999999987 66777888999
Q ss_pred ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 324 PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|++++|+|++. +++++.||.|++||
T Consensus 268 ~i~~~~~~~~~~--------~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 268 SIWSVDCMSNGD--------IIVGSSDNLVRIFS 293 (313)
T ss_dssp CEEEEEECTTSC--------EEEEETTSCEEEEE
T ss_pred eEEEEEEccCCC--------EEEEeCCCcEEEEe
Confidence 999999999986 55688999999996
No 22
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-43 Score=298.44 Aligned_cols=239 Identities=27% Similarity=0.490 Sum_probs=216.5
Q ss_pred cceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccc
Q 038568 62 VDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWL 139 (357)
Q Consensus 62 ~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (357)
...+.+ |..+|++++|+|++ |++|+.||+|++||+.+++....+.
T Consensus 101 ~~~l~g---h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~------------------------------ 147 (410)
T 1vyh_C 101 KYALSG---HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK------------------------------ 147 (410)
T ss_dssp SCEEEC---CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC------------------------------
T ss_pred eEeecc---cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------------------------------
Confidence 455666 99999999999986 9999999999999999886544332
Q ss_pred cccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccc
Q 038568 140 EHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDH 216 (357)
Q Consensus 140 ~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~ 216 (357)
+|...|.+++|+| ++|++|+.|++|++||+.+++++..+ .+|...|.+++|+|++ .|++|+.|+.|++||++
T Consensus 148 ~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~---- 222 (410)
T 1vyh_C 148 GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ---- 222 (410)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT----
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC----
Confidence 8999999999999 89999999999999999999998888 8899999999999998 69999999999999998
Q ss_pred ccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc------
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD------ 290 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 290 (357)
....+..+.+|...|.++.++|++.+|++|+.|+.|++||+.+++ ....+.+|...|.+++|+++
T Consensus 223 ------~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 223 ------TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE---CKAELREHRHVVECISWAPESSYSSI 293 (410)
T ss_dssp ------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred ------CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---eeeEecCCCceEEEEEEcCcccccch
Confidence 455677888999999999999999999999999999999999876 44566789999999999763
Q ss_pred ----------------eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEE
Q 038568 291 ----------------LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIK 354 (357)
Q Consensus 291 ----------------~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~ 354 (357)
+|++|+.|+.|++||++++ .++..+.+|...|++++|+|+++ +|++|+.||.|+
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~---~~~~~~~~h~~~v~~v~~~~~g~-------~l~s~s~D~~i~ 363 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG---MCLMTLVGHDNWVRGVLFHSGGK-------FILSCADDKTLR 363 (410)
T ss_dssp GGCCSCC-------CCEEEEEETTSEEEEEETTTT---EEEEEEECCSSCEEEEEECSSSS-------CEEEEETTTEEE
T ss_pred hhhccccccccCCCCCEEEEEeCCCeEEEEECCCC---ceEEEEECCCCcEEEEEEcCCCC-------EEEEEeCCCeEE
Confidence 7999999999999999987 67788899999999999999998 999999999999
Q ss_pred ecC
Q 038568 355 VWD 357 (357)
Q Consensus 355 ~wd 357 (357)
+||
T Consensus 364 vwd 366 (410)
T 1vyh_C 364 VWD 366 (410)
T ss_dssp EEC
T ss_pred EEE
Confidence 997
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.7e-43 Score=317.64 Aligned_cols=280 Identities=22% Similarity=0.340 Sum_probs=228.6
Q ss_pred eecccccCCCCCCCccceeEEEEe---cceEEEeeCC-ceEEEeccCCc-----cccceeccccCCCCceEEEEEecCc-
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH---NSLLYAASLN-EINVFDLISDY-----SHVDTFSNDLSSSGSVKSITFHITK- 84 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~-----~~~~~~~~~~~~~~~v~~l~~~~~~- 84 (357)
+....+++ |.+.|++++|+ +++|+||+.| +|++|++ ... .....+.+ |...|.+++|+|++
T Consensus 373 ~~~~~l~~-----H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~-~~~~~~~~~~~~~~~~---h~~~v~~v~~s~~g~ 443 (694)
T 3dm0_A 373 VLKGTMRA-----HTDMVTAIATPIDNADIIVSASRDKSIILWKL-TKDDKAYGVAQRRLTG---HSHFVEDVVLSSDGQ 443 (694)
T ss_dssp EEEEEEEC-----CSSCEEEEECCTTCCSEEEEEETTSEEEEEEC-CCSTTCSCEEEEEEEC---CSSCEEEEEECTTSS
T ss_pred chhhhccc-----CCceeEEEEecCCCCCEEEEEeCCCcEEEEEc-cCCCcccccccceecC---CCCcEEEEEECCCCC
Confidence 33445665 99999999998 5799999999 9999999 542 23456676 99999999999987
Q ss_pred -eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC
Q 038568 85 -IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD 161 (357)
Q Consensus 85 -l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d 161 (357)
|++|+.|++|++||+.+++....+. +|...|.+++|+| .+|++++.|
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~------------------------------~h~~~v~~~~~s~~~~~l~s~s~D 493 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFV------------------------------GHTKDVLSVAFSLDNRQIVSASRD 493 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE------------------------------CCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEe------------------------------CCCCCEEEEEEeCCCCEEEEEeCC
Confidence 9999999999999998876544332 8999999999999 899999999
Q ss_pred CeEEEEEcCcchhhhhc--cccccccEEEEEEecCC---eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccc
Q 038568 162 RSFKIWNASNYKCLESV--NKAHEDAVNAVVVSDNG---VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236 (357)
Q Consensus 162 g~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
++|++||.......... ...|...|.+++|+|++ .+++++.|+.|++||++ .......+.+|...
T Consensus 494 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~----------~~~~~~~~~~h~~~ 563 (694)
T 3dm0_A 494 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS----------NCKLRSTLAGHTGY 563 (694)
T ss_dssp SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT----------TCCEEEEECCCSSC
T ss_pred CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECC----------CCcEEEEEcCCCCC
Confidence 99999998654322211 14688899999999986 59999999999999998 45566778899999
Q ss_pred eeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeee
Q 038568 237 VNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCM 315 (357)
Q Consensus 237 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~ 315 (357)
|++++|+|++++|++|+.||.|++||+++++.+ ..+. +...+.+++|+++ .+++++.|+.|++||+++++ .+
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~---~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~---~~ 636 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL---YSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKS---IV 636 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTEEE---ECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTE---EE
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE---EEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCC---Ch
Confidence 999999999999999999999999999988743 2332 4567899999987 55555567779999999873 33
Q ss_pred eeecCC-------------------cCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 316 AFLEGH-------------------EKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 316 ~~~~~h-------------------~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
..+..+ .-.+++++|+|+++ +|++|+.||.|++||
T Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-------~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 637 EDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-------TLFSGYTDGVIRVWG 690 (694)
T ss_dssp EEECCCCC----------------CCCCEEEEEECTTSS-------EEEEEETTSEEEEEE
T ss_pred hhhccccccccccccccccccCCceeEEeeeEEEcCCCC-------EEEEEcCCCeEEEEe
Confidence 333221 12378999999999 999999999999996
No 24
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-42 Score=288.36 Aligned_cols=272 Identities=16% Similarity=0.235 Sum_probs=236.7
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~ 102 (357)
|.+.|++++|+ +++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+|++ |++++.||.|++||+.++
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~-~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 106 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYS-LNGERLGTLDG---HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNG 106 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEET-TTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCchhhhhhhh---cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 99999999999 8999999999 9999999 88899999988 99999999999986 999999999999999988
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC-----CeEEEEEcCcchhh
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD-----RSFKIWNASNYKCL 175 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d-----g~i~iwd~~~~~~~ 175 (357)
+....+ .+...+.+++|+| .++++++.+ |.|++||+......
T Consensus 107 ~~~~~~-------------------------------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~ 155 (369)
T 3zwl_B 107 QCVATW-------------------------------KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSAT 155 (369)
T ss_dssp CEEEEE-------------------------------ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTT
T ss_pred cEEEEe-------------------------------ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccc
Confidence 655443 3567899999999 889999988 99999999876543
Q ss_pred hhcc----------ccccc--cEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEE
Q 038568 176 ESVN----------KAHED--AVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242 (357)
Q Consensus 176 ~~~~----------~~~~~--~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 242 (357)
..+. ..+.. .+.+++|+|++ .|++++.||.|++||++. .......+..|...|.+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~~~v~~~~~ 226 (369)
T 3zwl_B 156 HELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN---------NYEYVDSIDLHEKSISDMQF 226 (369)
T ss_dssp CCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT---------TTEEEEEEECCSSCEEEEEE
T ss_pred eeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC---------CcEeEEEEecCCCceeEEEE
Confidence 3321 23333 89999999998 699999999999999971 24567778889999999999
Q ss_pred ecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCC--------------eEEEeeC
Q 038568 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADR--------------TVRIWQR 306 (357)
Q Consensus 243 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg--------------~i~vw~~ 306 (357)
+|++++|++++.|+.|++||+++++...... +...+.++.++++ ++++++.++ .+++||.
T Consensus 227 ~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 227 SPDLTYFITSSRDTNSFLVDVSTLQVLKKYE----TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred CCCCCEEEEecCCceEEEEECCCCceeeeec----CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 9999999999999999999999887543332 6677888888876 888888888 8999999
Q ss_pred CCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 307 GKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 307 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.++ +.+..+.+|...|++++|+|+++ +|++++.||.|++||
T Consensus 303 ~~~---~~~~~~~~~~~~v~~~~~s~~~~-------~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 303 IFE---EEIGRVQGHFGPLNTVAISPQGT-------SYASGGEDGFIRLHH 343 (369)
T ss_dssp TTC---CEEEEEECCSSCEEEEEECTTSS-------EEEEEETTSEEEEEE
T ss_pred CCC---cchhheecccCcEEEEEECCCCC-------EEEEEcCCCeEEEEE
Confidence 987 66778889999999999999998 999999999999996
No 25
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-42 Score=292.58 Aligned_cols=287 Identities=17% Similarity=0.207 Sum_probs=233.6
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCcc--ccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecC
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYS--HVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKIT 100 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~ 100 (357)
|.++|++++|+ +++|++|+.| .|++||+ ++++ .+..+.+ |...|.+++|+|++ |++++.|+.|++||+.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~-~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEK-SGNKWVQVHELKE---HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEE-ETTEEEEEEEEEC---CSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCcEEeeeeecC---CCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 88999999999 8999999999 9999999 7766 7888887 99999999999987 9999999999999998
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchh---h
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKC---L 175 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~---~ 175 (357)
+++....... ..|...|.+++|+| +++++++.||.|++||++.++. .
T Consensus 83 ~~~~~~~~~~----------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~ 134 (372)
T 1k8k_C 83 GRTWKPTLVI----------------------------LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC 134 (372)
T ss_dssp TTEEEEEEEC----------------------------CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE
T ss_pred CCeeeeeEEe----------------------------ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee
Confidence 7754333221 27888999999999 8999999999999999988763 3
Q ss_pred hhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccc--------cccceeeeeEeeccccceeEEEEecCC
Q 038568 176 ESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKE--------RKSRHMLVTTLVKHRSTVNALALNGDG 246 (357)
Q Consensus 176 ~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~ 246 (357)
..+...|...|.+++|+|++ +|++++.|+.|++||++....... .......+..+..|...|.+++|+|++
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC
Confidence 33335678999999999998 699999999999999752211100 011345667777899999999999999
Q ss_pred CEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCC--Cc------------
Q 038568 247 SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGK--EN------------ 310 (357)
Q Consensus 247 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~--~~------------ 310 (357)
++|++++.|+.|++||+++++. ...+..|...+.+++|+++ +|+++ .|+.|++|++.+ ++
T Consensus 215 ~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~ 290 (372)
T 1k8k_C 215 SRVAWVSHDSTVCLADADKKMA---VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQ 290 (372)
T ss_dssp SEEEEEETTTEEEEEEGGGTTE---EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--
T ss_pred CEEEEEeCCCEEEEEECCCCce---eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCcccc
Confidence 9999999999999999998874 4455678889999999876 66665 999999999987 31
Q ss_pred -----------------ceeee------eee-cCCcCceEEEEEee-CC---CCCCCCeEEEEEcCCCCeEEecC
Q 038568 311 -----------------CYRCM------AFL-EGHEKPVKSLVAIS-SS---SSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 311 -----------------~~~~~------~~~-~~h~~~v~~~~~~~-~~---~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
..... ..+ .+|..+|++++|.+ ++ . +|+||+.||.|++||
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-------~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 291 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-------QFCTTGMDGGMSIWD 358 (372)
T ss_dssp ------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-------EEEEEETTSEEEEEE
T ss_pred chhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee-------eEEEecCCCceEEEE
Confidence 00010 223 48999999999774 44 6 999999999999996
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-42 Score=293.64 Aligned_cols=290 Identities=13% Similarity=0.134 Sum_probs=229.4
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--c-ceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEec-Cc--
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--N-SLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHI-TK-- 84 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~-~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~-- 84 (357)
...+..+.+.+ |.+.|++++|+ + ++|++|+.| .|+|||+ .+++....+.. .+|...|.+++|+| +.
T Consensus 61 ~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 61 KSYKLHRTASP-----FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDY-DVQNKTSFIQG-MGPGDAITGMKFNQFNTNQ 133 (383)
T ss_dssp TTCEEEEEECC-----CSSCEEEEEECSSCTTEEEEEEBTSCEEEEET-TSTTCEEEECC-CSTTCBEEEEEEETTEEEE
T ss_pred cccceEEeccC-----CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeC-CCcccceeeec-CCcCCceeEEEeCCCCCCE
Confidence 34556666765 99999999999 5 899999999 9999999 77776666541 12999999999999 43
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCC
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDR 162 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg 162 (357)
|++++.|+.|++||+.+. ....+... ..|...|.+++|+| .+|++++.|+
T Consensus 134 l~s~~~d~~i~iwd~~~~-~~~~~~~~---------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~ 185 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSGS-VIQVFAKT---------------------------DSWDYWYCCVDVSVSRQMLATGDSTG 185 (383)
T ss_dssp EEEEETTTEEEEEETTSC-EEEEEECC---------------------------CCSSCCEEEEEEETTTTEEEEEETTS
T ss_pred EEEEeCCCEEEEEECCCC-ceEEEecc---------------------------CCCCCCeEEEEECCCCCEEEEECCCC
Confidence 999999999999999853 22222221 15668899999999 8999999999
Q ss_pred eEEEEEcCcchhhhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEE
Q 038568 163 SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL 240 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 240 (357)
.|++||+ +++.+..+ ..|...|.+++|+|++ .+++++.|+.|++||++ ........+..+ +|...|.++
T Consensus 186 ~i~i~d~-~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~------~~~~~~~~~~~~-~~~~~v~~~ 256 (383)
T 3ei3_B 186 RLLLLGL-DGHEIFKE-KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR------NIKDKNSYIAEM-PHEKPVNAA 256 (383)
T ss_dssp EEEEEET-TSCEEEEE-ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG------GCCSTTCEEEEE-ECSSCEEEE
T ss_pred CEEEEEC-CCCEEEEe-ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC------CCCcccceEEEe-cCCCceEEE
Confidence 9999999 56777777 7899999999999998 59999999999999998 222223444444 689999999
Q ss_pred EEec-CCCEEEEEecCCeEEEEecccCCceeeeeec----cCCc----------cceEEEeecCc-eEEEecCCCeEEEe
Q 038568 241 ALNG-DGSLLFSGGCDRWIVVWERERDHRMVFAEAL----WGHT----------GALLCLINVGD-LLASGSADRTVRIW 304 (357)
Q Consensus 241 ~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~----------~~v~~~~~~~~-~l~~~~~dg~i~vw 304 (357)
+|+| ++++|++++.|+.|++||+++.+....+... ..|. ..+..+.++++ .+ +++.||.|++|
T Consensus 257 ~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iw 335 (383)
T 3ei3_B 257 YFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIY 335 (383)
T ss_dssp EECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEE
T ss_pred EEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEE
Confidence 9999 9999999999999999999987654333211 1122 23334555444 23 78899999999
Q ss_pred eCCCCcceeeeeeecC--CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 305 QRGKENCYRCMAFLEG--HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 305 ~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|+.++ +.+..+.+ |...+..++|+|+++ +|++|+ ||.|++||
T Consensus 336 d~~~~---~~~~~l~~~~~~~~~~~~~~s~~g~-------~l~s~s-d~~i~iw~ 379 (383)
T 3ei3_B 336 DANSG---GLVHQLRDPNAAGIISLNKFSPTGD-------VLASGM-GFNILIWN 379 (383)
T ss_dssp ETTTC---CEEEEECBTTBCSCCCEEEECTTSS-------EEEEEE-TTEEEEEE
T ss_pred ecCCC---ceeeeecCCCCCceEEEEEEecCcc-------EEEEec-CCcEEEEe
Confidence 99987 55666665 567788889999998 999997 99999997
No 27
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.4e-42 Score=298.74 Aligned_cols=270 Identities=25% Similarity=0.413 Sum_probs=237.7
Q ss_pred CccceeEEEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCcccee
Q 038568 28 HHMIISCLAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQ 106 (357)
Q Consensus 28 h~~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~ 106 (357)
|...|.|+++++++|++|+.| .|++||. .+++....+.+ |...|.+++|.++.|++|+.||+|++||+.+++...
T Consensus 132 ~~~~v~~~~~d~~~l~~g~~dg~i~iwd~-~~~~~~~~~~~---h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 132 TSKGVYCLQYDDQKIVSGLRDNTIKIWDK-NTLECKRILTG---HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp SCCCEEEEECCSSEEEEEESSSCEEEEES-SSCCEEEEECC---CSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred CCCcEEEEEECCCEEEEEeCCCeEEEEeC-CCCeEEEEEcC---CCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 788899999999999999999 9999999 89999999988 999999999966669999999999999999886544
Q ss_pred eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhh---hhcccccc
Q 038568 107 LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCL---ESVNKAHE 183 (357)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~ 183 (357)
.+. +|...|.+++|+++.+++|+.||.|++||+++++.+ ..+ .+|.
T Consensus 208 ~~~------------------------------~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~ 256 (435)
T 1p22_A 208 TLI------------------------------HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVL-VGHR 256 (435)
T ss_dssp EEC------------------------------CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEE-CCCS
T ss_pred EEc------------------------------CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCC
Confidence 332 788999999999999999999999999999987765 344 6889
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEec
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWER 263 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 263 (357)
..|.++.+ ....+++|+.||.|++||++ ....+..+.+|...|.++.++ ++++++|+.||.|++||+
T Consensus 257 ~~v~~~~~-~~~~l~s~~~dg~i~vwd~~----------~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 257 AAVNVVDF-DDKYIVSASGDRTIKVWNTS----------TCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp SCEEEEEE-ETTEEEEEETTSEEEEEETT----------TCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEET
T ss_pred CcEEEEEe-CCCEEEEEeCCCeEEEEECC----------cCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEEC
Confidence 99999999 33479999999999999998 456677888999999999995 679999999999999999
Q ss_pred ccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcc------eeeeeeecCCcCceEEEEEeeCCCCC
Q 038568 264 ERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENC------YRCMAFLEGHEKPVKSLVAISSSSSA 337 (357)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~ 337 (357)
++++ ....+.+|...+.++++++.+|++|+.||.|++||+.+++. ..++..+.+|.++|++++| ++.
T Consensus 324 ~~~~---~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~-- 396 (435)
T 1p22_A 324 ECGA---CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEF-- 396 (435)
T ss_dssp TTCC---EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSS--
T ss_pred CCCC---EEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCC--
Confidence 9887 45567789999999999999999999999999999976421 1167788999999999999 555
Q ss_pred CCCeEEEEEcCCCCeEEecC
Q 038568 338 SNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 338 ~~~~~~l~s~~~dg~v~~wd 357 (357)
+|++|+.||.|++||
T Consensus 397 -----~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 397 -----QIVSSSHDDTILIWD 411 (435)
T ss_dssp -----CEEECCSSSEEEEEC
T ss_pred -----EEEEEeCCCEEEEEE
Confidence 899999999999997
No 28
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-42 Score=296.62 Aligned_cols=286 Identities=22% Similarity=0.394 Sum_probs=234.6
Q ss_pred ccceecccccCCCCCCCccceeEEEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeec
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQ 90 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 90 (357)
.+++++..+.+ |.+.|++++|++++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+++.+++++.
T Consensus 147 ~~~~~~~~~~~-----h~~~v~~~~~~~~~l~s~~~dg~i~vwd~-~~~~~~~~~~~---h~~~v~~~~~~~~~l~s~s~ 217 (445)
T 2ovr_B 147 VTGKCLRTLVG-----HTGGVWSSQMRDNIIISGSTDRTLKVWNA-ETGECIHTLYG---HTSTVRCMHLHEKRVVSGSR 217 (445)
T ss_dssp TTCCEEEECCC-----CSSCEEEEEEETTEEEEEETTSCEEEEET-TTTEEEEEECC---CSSCEEEEEEETTEEEEEET
T ss_pred CCCcEEEEEcC-----CCCCEEEEEecCCEEEEEeCCCeEEEEEC-CcCcEEEEECC---CCCcEEEEEecCCEEEEEeC
Confidence 34555666664 778888888887788888877 8888887 77777777776 77888888887777888888
Q ss_pred CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcC
Q 038568 91 DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNAS 170 (357)
Q Consensus 91 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~ 170 (357)
||+|++||+.+++....+ .+|...|.++.+..+++++++.||.|++||++
T Consensus 218 dg~i~~wd~~~~~~~~~~------------------------------~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~ 267 (445)
T 2ovr_B 218 DATLRVWDIETGQCLHVL------------------------------MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPE 267 (445)
T ss_dssp TSEEEEEESSSCCEEEEE------------------------------ECCSSCEEEEEECSSCEEEEETTSCEEEEEGG
T ss_pred CCEEEEEECCCCcEEEEE------------------------------cCCcccEEEEEECCCEEEEEcCCCEEEEEECC
Confidence 888888887766544333 27889999999977999999999999999999
Q ss_pred cchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEE
Q 038568 171 NYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLF 250 (357)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 250 (357)
+++++..+ ..|...+.++.+ ....+++++.|+.|++||++ ..+.+..+.+|...+.++.++ +++++
T Consensus 268 ~~~~~~~~-~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~----------~~~~~~~~~~~~~~v~~~~~~--~~~l~ 333 (445)
T 2ovr_B 268 TETCLHTL-QGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVE----------TGNCIHTLTGHQSLTSGMELK--DNILV 333 (445)
T ss_dssp GTEEEEEE-CCCSSCEEEEEE-CSSEEEEEETTSCEEEEETT----------TCCEEEEECCCCSCEEEEEEE--TTEEE
T ss_pred CCcEeEEe-cCCCCceEEEEE-CCCEEEEEeCCCeEEEEECC----------CCCEEEEEcCCcccEEEEEEe--CCEEE
Confidence 99998888 789999999999 33379999999999999998 455677788899999888875 56999
Q ss_pred EEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeee--cCCcCceEEE
Q 038568 251 SGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFL--EGHEKPVKSL 328 (357)
Q Consensus 251 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~h~~~v~~~ 328 (357)
+|+.||.|++||+++++....+.....|...|.++++++++|++|+.||.|++||+.+++....+... .+|.+.|+++
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~ 413 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRI 413 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEE
Confidence 99999999999999887655444444588999999999999999999999999999998443333222 4788999999
Q ss_pred EEeeCCCCCCCCeEEEEEcCCCCe----EEecC
Q 038568 329 VAISSSSSASNGIVSIGSGSLNGE----IKVWD 357 (357)
Q Consensus 329 ~~~~~~~~~~~~~~~l~s~~~dg~----v~~wd 357 (357)
+|+|++. ++++|+.||+ |.+||
T Consensus 414 ~~s~~~~-------~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 414 RASNTKL-------VCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EECSSEE-------EEEEECSSSSSCCEEEEEE
T ss_pred EecCCEE-------EEEEcccCCCCccEEEEEE
Confidence 9999987 9999999997 99986
No 29
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=6.8e-42 Score=295.53 Aligned_cols=274 Identities=26% Similarity=0.414 Sum_probs=240.8
Q ss_pred ecccccCCCCCCCccc-eeEEEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCe
Q 038568 16 CIASLKIPSPDPHHMI-ISCLAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCK 93 (357)
Q Consensus 16 ~~~~~~~~~g~~h~~~-i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~ 93 (357)
..+.+++ |.+. +.|+.+++++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+++.+++++.||+
T Consensus 110 ~~~~l~~-----h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~-~~~~~~~~~~~---h~~~v~~~~~~~~~l~s~~~dg~ 180 (445)
T 2ovr_B 110 SPKVLKG-----HDDHVITCLQFCGNRIVSGSDDNTLKVWSA-VTGKCLRTLVG---HTGGVWSSQMRDNIIISGSTDRT 180 (445)
T ss_dssp CCEEEEC-----STTSCEEEEEEETTEEEEEETTSCEEEEET-TTCCEEEECCC---CSSCEEEEEEETTEEEEEETTSC
T ss_pred eeEEecc-----cCCCcEEEEEEcCCEEEEEECCCcEEEEEC-CCCcEEEEEcC---CCCCEEEEEecCCEEEEEeCCCe
Confidence 3445554 8886 57888889999999999 9999999 88999999988 99999999999888999999999
Q ss_pred EEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcch
Q 038568 94 IRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYK 173 (357)
Q Consensus 94 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 173 (357)
|++||+.+++....+. +|...|.++.++++.+++|+.||.|++||+++++
T Consensus 181 i~vwd~~~~~~~~~~~------------------------------~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 181 LKVWNAETGECIHTLY------------------------------GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp EEEEETTTTEEEEEEC------------------------------CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCC
T ss_pred EEEEECCcCcEEEEEC------------------------------CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCc
Confidence 9999999886543332 7889999999999999999999999999999999
Q ss_pred hhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe
Q 038568 174 CLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253 (357)
Q Consensus 174 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 253 (357)
.+..+ ..|...+.++.+ ....+++++.||.|++||++ ....+..+.+|...|.+++| ++.++++++
T Consensus 231 ~~~~~-~~~~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~----------~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 296 (445)
T 2ovr_B 231 CLHVL-MGHVAAVRCVQY-DGRRVVSGAYDFMVKVWDPE----------TETCLHTLQGHTNRVYSLQF--DGIHVVSGS 296 (445)
T ss_dssp EEEEE-ECCSSCEEEEEE-CSSCEEEEETTSCEEEEEGG----------GTEEEEEECCCSSCEEEEEE--CSSEEEEEE
T ss_pred EEEEE-cCCcccEEEEEE-CCCEEEEEcCCCEEEEEECC----------CCcEeEEecCCCCceEEEEE--CCCEEEEEe
Confidence 88888 789999999999 33379999999999999998 45667778889999999999 788999999
Q ss_pred cCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeeecC---CcCceEEEEE
Q 038568 254 CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEG---HEKPVKSLVA 330 (357)
Q Consensus 254 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---h~~~v~~~~~ 330 (357)
.||.|++||+++++ ....+.+|...+.++.++++++++|+.||.|++||++++ +.+..+.+ |..+|++++|
T Consensus 297 ~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 297 LDTSIRVWDVETGN---CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG---QCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp TTSCEEEEETTTCC---EEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC---CEEEEECSTTSCSSCEEEEEE
T ss_pred CCCeEEEEECCCCC---EEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCC---cEEEEEccCCCCCCCEEEEEE
Confidence 99999999999887 445667899999999999999999999999999999987 44555554 8899999999
Q ss_pred eeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 331 ISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 331 ~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++ + +|++|+.||.|++||
T Consensus 371 ~~--~-------~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 371 NK--N-------FVITSSDDGTVKLWD 388 (445)
T ss_dssp CS--S-------EEEEEETTSEEEEEE
T ss_pred CC--C-------EEEEEeCCCeEEEEE
Confidence 64 4 999999999999997
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=286.63 Aligned_cols=237 Identities=14% Similarity=0.118 Sum_probs=199.5
Q ss_pred CccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceecc-ccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSN-DLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~ 102 (357)
|...|.+++|+ .+.|++|+.| .|+|||+ ++++.+..+.. ..+|.+.|++++|+|++ |++|+.|++|++||+.++
T Consensus 81 ~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~-~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 81 TEAGVADLTWVGERGILVASDSGAVELWEL-DENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ 159 (344)
T ss_dssp ESSCEEEEEEETTTEEEEEETTSEEEEEEE-CTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred cCCCEEEEEEeCCCeEEEEECCCEEEEEec-cCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 66789999999 7889999999 9999999 77766554331 11299999999999987 999999999999999988
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhcc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVN 179 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~ 179 (357)
+....+. +|...|.+++|++ .+|++++.|++|++||++++++...+.
T Consensus 160 ~~~~~~~------------------------------~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 209 (344)
T 4gqb_B 160 VVLSSYR------------------------------AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG 209 (344)
T ss_dssp EEEEEEC------------------------------CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC
T ss_pred cEEEEEc------------------------------CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeee
Confidence 6544332 8999999999998 578999999999999999998877663
Q ss_pred -ccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCC-CEEEEEecC
Q 038568 180 -KAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG-SLLFSGGCD 255 (357)
Q Consensus 180 -~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 255 (357)
..+...+.+++|+|++ +|++|+.||.|++||++ ..+++..+.+|...|++++|+|++ ++|++|+.|
T Consensus 210 ~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~----------~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 210 CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK----------STSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC----------C--CCEEEECCSSCEEEEEECSSSSCCEEEEETT
T ss_pred cceeeccceeeeecCCCCcceEEeccCCcEEEEECC----------CCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC
Confidence 3455679999999965 58899999999999998 456677889999999999999987 589999999
Q ss_pred CeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCC
Q 038568 256 RWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 256 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~ 309 (357)
++|++||+++++. ..+.+|...|.+++|+|+ +|++++.|++|++|++.+.
T Consensus 280 ~~i~vwd~~~~~~----~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 280 CSLAVLDSSLSEL----FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp SCEEEECTTCCEE----EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CeEEEEECCCCcE----EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9999999987753 245789999999999875 6789999999999999874
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.8e-42 Score=305.23 Aligned_cols=276 Identities=24% Similarity=0.429 Sum_probs=240.8
Q ss_pred cceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEE
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFT 87 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~ 87 (357)
..+++..+.+ |...|++++|+ +++|++++.| .|++|+. + ++.+..+.+ |...|.+++|+|++ |++
T Consensus 251 ~~~~~~~~~~-----~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~-~~~~~~~~~---h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 251 NGQLLQTLTG-----HSSSVNGVAFRPDGQTIASASDDKTVKLWNR-N-GQLLQTLTG---HSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp TSCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSCEEEEET-T-SCEEEEECC---CSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEec-----CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-C-CcEEEEEec---CCCCeEEEEECCCCCEEEE
Confidence 3456666665 99999999999 8899999999 9999997 4 467778887 99999999999987 999
Q ss_pred eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEE
Q 038568 88 AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFK 165 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~ 165 (357)
++.|++|++||...... ..+ .+|...+.+++|+| .++++++.||.|+
T Consensus 321 ~~~d~~i~~w~~~~~~~-~~~------------------------------~~~~~~v~~~~~s~~g~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 321 ASDDKTVKLWNRNGQHL-QTL------------------------------TGHSSSVWGVAFSPDGQTIASASDDKTVK 369 (577)
T ss_dssp EETTSCEEEEETTSCEE-EEE------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EeCCCeEEEEeCCCCee-EEE------------------------------eCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 99999999999865432 111 27889999999999 8999999999999
Q ss_pred EEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec
Q 038568 166 IWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244 (357)
Q Consensus 166 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 244 (357)
+||. +++.+..+ ..|...|.+++|+|++ +|++++.|+.|++||.. .+.+..+.+|...|++++|+|
T Consensus 370 ~~~~-~~~~~~~~-~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-----------~~~~~~~~~~~~~v~~~~~s~ 436 (577)
T 2ymu_A 370 LWNR-NGQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-----------GQLLQTLTGHSSSVWGVAFSP 436 (577)
T ss_dssp EEET-TCCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-----------CCEEEEEECCSSCEEEEEECT
T ss_pred EEcC-CCCEEEEe-cCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-----------CCEEEEecCCCCCeEEEEECC
Confidence 9995 56677777 7899999999999999 59999999999999964 345677889999999999999
Q ss_pred CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCc
Q 038568 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~ 322 (357)
++++|++++.|+.|++||... + ....+.+|...+.+++|+++ +|++++.|+.|++||.. + +++..+.+|.
T Consensus 437 d~~~l~~~~~d~~v~~w~~~~-~---~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~---~~~~~~~~h~ 508 (577)
T 2ymu_A 437 DDQTIASASDDKTVKLWNRNG-Q---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G---QLLQTLTGHS 508 (577)
T ss_dssp TSSEEEEEETTSEEEEEETTS-C---EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-S---CEEEEEECCS
T ss_pred CCCEEEEEcCCCEEEEEECCC-C---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-C---CEEEEEeCCC
Confidence 999999999999999999753 3 44566789999999999877 99999999999999964 3 5677889999
Q ss_pred CceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 323 KPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 323 ~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
..|++++|+|+++ +|++++.||.|++||
T Consensus 509 ~~v~~l~~s~dg~-------~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 509 SSVRGVAFSPDGQ-------TIASASDDKTVKLWN 536 (577)
T ss_dssp SCEEEEEECTTSS-------CEEEEETTSEEEEEC
T ss_pred CCEEEEEEcCCCC-------EEEEEECcCEEEEEe
Confidence 9999999999998 999999999999997
No 32
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=285.91 Aligned_cols=240 Identities=21% Similarity=0.288 Sum_probs=209.6
Q ss_pred ceeccccCCCCceEEEEEecC------ceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccccc
Q 038568 63 DTFSNDLSSSGSVKSITFHIT------KIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKR 136 (357)
Q Consensus 63 ~~~~~~~~~~~~v~~l~~~~~------~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
+.+++ |.+.|.+++|+|+ .|++|+.|++|++|++..++.... ..
T Consensus 26 ~~~~~---H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~-~~-------------------------- 75 (321)
T 3ow8_A 26 KQEQA---HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQ-WS-------------------------- 75 (321)
T ss_dssp EETTS---SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEE-EE--------------------------
T ss_pred eeccc---CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeee-ee--------------------------
Confidence 34455 9999999999874 299999999999999976543211 11
Q ss_pred ccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccc
Q 038568 137 LWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSV 213 (357)
Q Consensus 137 ~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 213 (357)
+.+|...|.+++|++ .++++++.|++|++||+.+++.+..+ ..+...+.+++|+|++ +|++++.|+.|++||++
T Consensus 76 -l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~- 152 (321)
T 3ow8_A 76 -LEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSI-DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE- 152 (321)
T ss_dssp -ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE-ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT-
T ss_pred -eccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEE-eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC-
Confidence 138999999999999 89999999999999999999988888 7788889999999999 69999999999999998
Q ss_pred cccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--e
Q 038568 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--L 291 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~ 291 (357)
.......+..|...|.+++|+|++++|++|+.||.|++||+++++ ....+.+|..+|.+++|+++ +
T Consensus 153 ---------~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 153 ---------SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK---LLHTLEGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp ---------TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCCCEEEECTTSCE
T ss_pred ---------CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---EEEEEcccCCceeEEEEcCCCCE
Confidence 344556677888999999999999999999999999999999876 45567789999999999877 9
Q ss_pred EEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 292 LASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 292 l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++|+.|+.|++||++++ .....+.+|...|.+++|+|++. +|++++.||+|++||
T Consensus 221 l~s~s~dg~i~iwd~~~~---~~~~~~~~h~~~v~~~~~sp~~~-------~l~s~s~D~~v~iwd 276 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHA---NLAGTLSGHASWVLNVAFCPDDT-------HFVSSSSDKSVKVWD 276 (321)
T ss_dssp EEEECTTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCc---ceeEEEcCCCCceEEEEECCCCC-------EEEEEeCCCcEEEEe
Confidence 999999999999999987 56778899999999999999998 999999999999997
No 33
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-42 Score=298.54 Aligned_cols=298 Identities=14% Similarity=0.235 Sum_probs=229.3
Q ss_pred ccceecccc-cCCCCCCCccceeEEEEe---cceEEEeeCC-ceEEEeccCC---cc---ccceeccccCCCCceEEEEE
Q 038568 12 FKHHCIASL-KIPSPDPHHMIISCLAVH---NSLLYAASLN-EINVFDLISD---YS---HVDTFSNDLSSSGSVKSITF 80 (357)
Q Consensus 12 ~~~~~~~~~-~~~~g~~h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~---~~---~~~~~~~~~~~~~~v~~l~~ 80 (357)
+.++++..+ ++ |.+.|++++|+ +++||+|+.| .|+|||+ .+ +. ....+ . |...|.+++|
T Consensus 50 ~~g~~~~~~~~~-----h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~-~~~~~~~~~~~~~~~-~---h~~~v~~~~~ 119 (437)
T 3gre_A 50 LRGKLIATLMEN-----EPNSITSSAVSPGETPYLITGSDQGVIKIWNL-KEIIVGEVYSSSLTY-D---CSSTVTQITM 119 (437)
T ss_dssp CCCCEEEEECTT-----TTSCEEEEEEECSSSCEEEEEETTSEEEEEEH-HHHHTTCCCSCSEEE-E---CSSCEEEEEE
T ss_pred ccceEEeeeccC-----CCCceEEEEECCCCCCEEEEecCCceEEEeEC-cccccCcccceeeec-c---CCCCEEEEEE
Confidence 456667777 64 99999999998 5799999999 9999999 55 32 12222 3 9999999999
Q ss_pred ecCc--eEEeecCCeEEEEecC---CccceeeeeecCccccceeeeecCCCeEEEeccccccccc--ccccEEEEEEe--
Q 038568 81 HITK--IFTAHQDCKIRVWKIT---ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLE--HWDAVSDLVVK-- 151 (357)
Q Consensus 81 ~~~~--l~~~~~d~~i~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~-- 151 (357)
+|++ |++++.||+|++||++ .++........ ... . ..+.. +...+.++.+.
T Consensus 120 ~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-----~i~---------~------~~~~~~~~~~~~~~~~~~~~ 179 (437)
T 3gre_A 120 IPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCE-----CIR---------K------INLKNFGKNEYAVRMRAFVN 179 (437)
T ss_dssp CTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEE-----EEE---------E------EEGGGGSSCCCEEEEEEEEC
T ss_pred eCCCCEEEEEeCCCEEEEEEeccccCCceeeccccc-----eeE---------E------EEccCcccccCceEEEEEEc
Confidence 9976 9999999999999995 33322211110 000 0 00011 56778888844
Q ss_pred c--CeEEEEecCCeEEEEEcCcchhhhhcccc--ccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceee
Q 038568 152 Q--GLMYSVSWDRSFKIWNASNYKCLESVNKA--HEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHML 226 (357)
Q Consensus 152 ~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 226 (357)
+ .++++++.||.|++||+++++++..+ .. |...|++++|+|++ +|++|+.||.|++||++ ....
T Consensus 180 ~~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~----------~~~~ 248 (437)
T 3gre_A 180 EEKSLLVALTNLSRVIIFDIRTLERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR----------FNVL 248 (437)
T ss_dssp SSCEEEEEEETTSEEEEEETTTCCEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT----------TTEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC----------CccE
Confidence 4 79999999999999999999998888 45 88999999999998 59999999999999998 3455
Q ss_pred eeEee-ccccceeEEEEe----cCCCEEEEEecCCeEEEEecccCCceeeeee---------------------ccC--C
Q 038568 227 VTTLV-KHRSTVNALALN----GDGSLLFSGGCDRWIVVWERERDHRMVFAEA---------------------LWG--H 278 (357)
Q Consensus 227 ~~~~~-~~~~~v~~~~~~----~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~---------------------~~~--~ 278 (357)
+..+. .|..+|.+++|+ |++.+|++|+.||.|++||+++++....+.. +.+ |
T Consensus 249 ~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 328 (437)
T 3gre_A 249 IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRS 328 (437)
T ss_dssp EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCS
T ss_pred EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccccc
Confidence 56554 678899999665 4677999999999999999997764433321 122 7
Q ss_pred ccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeee----------------------------------ecCCcC
Q 038568 279 TGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAF----------------------------------LEGHEK 323 (357)
Q Consensus 279 ~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~----------------------------------~~~h~~ 323 (357)
...|.+++|++. +|++|+.||.|++||+.+++....+.. ...|.+
T Consensus 329 ~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 408 (437)
T 3gre_A 329 LNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHD 408 (437)
T ss_dssp GGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CC
T ss_pred CCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCccccccc
Confidence 777888888855 899999999999999998754333221 123899
Q ss_pred ceEEEEEeeC--CCCCCCCeEEEEEcCCCCeEEecC
Q 038568 324 PVKSLVAISS--SSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~--~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.|++++|+++ .. +|++|+.||.|++|+
T Consensus 409 ~I~~i~~~~~~~~~-------~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 409 IINSISTCEVDETP-------LLVACDNSGLIGIFQ 437 (437)
T ss_dssp CEEEEEEEESSSSE-------EEEEEETTSCEEEEC
T ss_pred ceeeEeeeccCCce-------EEEEEcCCceEEEeC
Confidence 9999999998 54 999999999999996
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-41 Score=280.35 Aligned_cols=273 Identities=16% Similarity=0.269 Sum_probs=229.8
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceecccc--CCCCceEEEEEecCc--eEEeecCCeEEEEecC
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDL--SSSGSVKSITFHITK--IFTAHQDCKIRVWKIT 100 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~--~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~ 100 (357)
|.+.|++++|+ +++|++++ | .|++||+ .+++....+.... .|...|.+++|+|++ |++++.|+.|++||+.
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDI-SHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEET-TSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CCCceEEEEEecCCcEEEEcC-CCeEEEEEC-CCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 99999999999 88999998 8 9999999 6655433332111 289999999999987 9999999999999998
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhc
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESV 178 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~ 178 (357)
+++..... . +..|...|.+++|+| +++++++.||.|++||+++++.+..+
T Consensus 128 ~~~~~~~~-~---------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 128 APTPRIKA-E---------------------------LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp CC--EEEE-E---------------------------EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCcceee-e---------------------------cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeee
Confidence 77532211 1 127888999999999 79999999999999999999888888
Q ss_pred cccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCe
Q 038568 179 NKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257 (357)
Q Consensus 179 ~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 257 (357)
..|...+.+++|+|++ .|++++.|+.|++||++ ..+....+ .+...+.+++|+|++++|++++.|+.
T Consensus 180 -~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~----------~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 180 -QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLR----------EGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----------TTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred -ecccCceEEEEECCCCCEEEEEecCCcEEEEECC----------CCceEeee-cCCCceEEEEECCCCCEEEEEcCCCc
Confidence 7799999999999998 69999999999999998 23333333 46788999999999999999999999
Q ss_pred EEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 258 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
|++||+++.+. ..+..|...+.++.|+++ +|++++.||.|++||+.+++ .+ ....|...|++++|+|+++
T Consensus 248 i~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~~-~~~~~~~~v~~~~~s~~~~ 319 (337)
T 1gxr_A 248 VEVLHVNKPDK----YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---SI-FQSKESSSVLSCDISVDDK 319 (337)
T ss_dssp EEEEETTSSCE----EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EE-EEEECSSCEEEEEECTTSC
T ss_pred EEEEECCCCCe----EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---EE-EEecCCCcEEEEEECCCCC
Confidence 99999998753 245678999999999876 99999999999999999874 23 2345788999999999998
Q ss_pred CCCCCeEEEEEcCCCCeEEecC
Q 038568 336 SASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 336 ~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|++++.||.|++||
T Consensus 320 -------~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 320 -------YIVTGSGDKKATVYE 334 (337)
T ss_dssp -------EEEEEETTSCEEEEE
T ss_pred -------EEEEecCCCeEEEEE
Confidence 999999999999996
No 35
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.1e-42 Score=289.40 Aligned_cols=290 Identities=16% Similarity=0.235 Sum_probs=232.4
Q ss_pred CccceeEEEEe------cceEEEeeCC-ceEEEeccCCccccceecccc--CCCCceEEEEEecC----c--eEEeecCC
Q 038568 28 HHMIISCLAVH------NSLLYAASLN-EINVFDLISDYSHVDTFSNDL--SSSGSVKSITFHIT----K--IFTAHQDC 92 (357)
Q Consensus 28 h~~~i~~~~~s------~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~--~~~~~v~~l~~~~~----~--l~~~~~d~ 92 (357)
|.++|++++|+ ...+++++.+ .|++||+ .+++.+..+.... .|...|++++|+|+ + |++++.||
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYEC-HSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEE-CGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEc-CCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 99999999998 2345555556 9999999 7777776666422 26688999999998 3 99999999
Q ss_pred eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEc
Q 038568 93 KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNA 169 (357)
Q Consensus 93 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~ 169 (357)
.|++||+.+++....+. +|...|.+++|+| .+|++++.||.|++||+
T Consensus 96 ~i~v~d~~~~~~~~~~~------------------------------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 96 IIRIINPITMQCIKHYV------------------------------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp EEEEECTTTCCEEEEEE------------------------------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred EEEEEEchhceEeeeec------------------------------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 99999999876544432 7899999999997 78999999999999999
Q ss_pred Ccchhhhhcc--ccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccc------------------cceeeee
Q 038568 170 SNYKCLESVN--KAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERK------------------SRHMLVT 228 (357)
Q Consensus 170 ~~~~~~~~~~--~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~------------------~~~~~~~ 228 (357)
++++.+..+. ..|...|.+++|+|++ +|++++.||.|++||++......... .......
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 9988777652 4688999999999998 69999999999999998432111000 0011123
Q ss_pred EeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCc-----------eeeeeeccCCccceEEEeec----CceEE
Q 038568 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHR-----------MVFAEALWGHTGALLCLINV----GDLLA 293 (357)
Q Consensus 229 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~~v~~~~~~----~~~l~ 293 (357)
....|...|.+++|+ +++|++++.|+.|++||+++... ......+..|...+.+++|+ +.+|+
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 334589999999999 67999999999999999987643 12355667788888777766 55999
Q ss_pred EecCCCeEEEeeCCCCccee-eeeeecCC--cCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 294 SGSADRTVRIWQRGKENCYR-CMAFLEGH--EKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 294 ~~~~dg~i~vw~~~~~~~~~-~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|+.||.|++||+.+++... ....+.+| ..+|++++|+|+++ +|++++.||.|++||
T Consensus 304 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 304 LGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-------ILIAVCDDASIWRWD 363 (366)
T ss_dssp EECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-------EEEEEETTSEEEEEE
T ss_pred EEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-------eEEEEeCCCEEEEEE
Confidence 99999999999999875433 45567777 79999999999998 999999999999997
No 36
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.6e-41 Score=293.58 Aligned_cols=275 Identities=20% Similarity=0.326 Sum_probs=235.1
Q ss_pred ecccccCCCCCCCccc-eeEEEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCC
Q 038568 16 CIASLKIPSPDPHHMI-ISCLAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDC 92 (357)
Q Consensus 16 ~~~~~~~~~g~~h~~~-i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~ 92 (357)
....+++ |.+. +.++.+++++|++|+.| .|++||+ .+++.+..+.+ |.+.|.+++|+|++ |++++.||
T Consensus 113 ~~~~l~~-----h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~-~~~~~~~~~~~---h~~~V~~l~~~~~~~l~s~s~dg 183 (464)
T 3v7d_B 113 QRTTLRG-----HMTSVITCLQFEDNYVITGADDKMIRVYDS-INKKFLLQLSG---HDGGVWALKYAHGGILVSGSTDR 183 (464)
T ss_dssp EEEEEEC-----CSSSCEEEEEEETTEEEEEETTSCEEEEET-TTTEEEEEECC---CSSCEEEEEECSTTEEEEEETTS
T ss_pred ceEEEcC-----CCCCcEEEEEECCCEEEEEcCCCcEEEEEC-CCCcEEEEEeC---CCcCEEEEEEcCCCEEEEEeCCC
Confidence 3445665 8877 57888889999999999 9999999 89999999998 99999999999987 99999999
Q ss_pred eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEEEE
Q 038568 93 KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWN 168 (357)
Q Consensus 93 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd 168 (357)
+|++||+++++....+ .+|...|.+++|.+ .++++++.||.|++||
T Consensus 184 ~i~vwd~~~~~~~~~~------------------------------~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVF------------------------------EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp CEEEEETTTTEEEEEE------------------------------CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred CEEEEECCCCcEEEEE------------------------------CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 9999999987654333 27899999999984 7899999999999999
Q ss_pred cCcchhhh-----------------------hccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccce
Q 038568 169 ASNYKCLE-----------------------SVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRH 224 (357)
Q Consensus 169 ~~~~~~~~-----------------------~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 224 (357)
+++++... .+ .+|...+.++. +++ .+++++.|+.|++||++ ..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~--~~~~~l~~~~~d~~i~vwd~~----------~~ 300 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL-RGHMASVRTVS--GHGNIVVSGSYDNTLIVWDVA----------QM 300 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEE-CCCSSCEEEEE--EETTEEEEEETTSCEEEEETT----------TT
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEc-cCccceEEEEc--CCCCEEEEEeCCCeEEEEECC----------CC
Confidence 98765432 23 56777787774 444 79999999999999998 45
Q ss_pred eeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEe
Q 038568 225 MLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIW 304 (357)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw 304 (357)
+.+..+.+|...|.+++|+|+++++++|+.||.|++||+++++ ....+.+|...+.++.+++++|++++.||.|++|
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vw 377 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE---LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGW 377 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEE
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc---EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEE
Confidence 6677888999999999999999999999999999999999876 4556778999999999999999999999999999
Q ss_pred eCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 305 QRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 305 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++++. ..... .|...+..++|++++. +|++|+ ||.|++||
T Consensus 378 d~~~~~---~~~~~-~~~~~~~~~~~~~~~~-------~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 378 DANDYS---RKFSY-HHTNLSAITTFYVSDN-------ILVSGS-ENQFNIYN 418 (464)
T ss_dssp ETTTCC---EEEEE-ECTTCCCEEEEEECSS-------EEEEEE-TTEEEEEE
T ss_pred ECCCCc---eeeee-cCCCCccEEEEEeCCC-------EEEEec-CCeEEEEE
Confidence 999863 22222 3667788899999998 999988 99999997
No 37
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-41 Score=290.32 Aligned_cols=273 Identities=16% Similarity=0.282 Sum_probs=225.7
Q ss_pred ceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCcccee
Q 038568 31 IISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQ 106 (357)
Q Consensus 31 ~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~ 106 (357)
.++.|+|+ +++||+|. | +|+|||. .+++..+.+... .|...|++|+|+|++ |++|+.||+|++||+.+++...
T Consensus 107 y~~~l~wS~~n~lAvgl-d~tV~lWd~-~tg~~~~~~~~~-~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL-DNSVYLWSA-SSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECTTSEEEEEE-TTEEEEEET-TTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECCCCEEEEEe-CCEEEEEEC-CCCCEEEEEEec-CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 46789999 88888876 6 9999999 888887766531 278899999999987 9999999999999999886554
Q ss_pred eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchh-hhhcccccccc
Q 038568 107 LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKC-LESVNKAHEDA 185 (357)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~ 185 (357)
.+. +|...+.++.+++..+++|+.|+.+++||...... +..+ ..|...
T Consensus 184 ~~~------------------------------~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~-~~h~~~ 232 (420)
T 4gga_A 184 NMT------------------------------SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL-SGHSQE 232 (420)
T ss_dssp EEC------------------------------CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE-ECCSSC
T ss_pred EEe------------------------------CCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEe-cccccc
Confidence 332 88999999999999999999999999999887543 4445 789999
Q ss_pred EEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCC-EEEE--EecCCeEEEE
Q 038568 186 VNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS-LLFS--GGCDRWIVVW 261 (357)
Q Consensus 186 v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~--~~~dg~i~vw 261 (357)
+..+.++|++ ++++++.|+.+++|+.. ........+.....|...|.+++|+|.+. ++++ |+.|+.|++|
T Consensus 233 ~~~~~~~~~g~~l~s~~~D~~v~i~~~~------~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 233 VCGLRWAPDGRHLASGGNDNLVNVWPSA------PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESS------CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred eeeeeecCCCCeeeeeeccccceEEeec------cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 9999999998 69999999999999997 33334445667778999999999999654 5554 4579999999
Q ss_pred ecccCCceeeeeeccCCccceEEEeecCc--eEEE--ecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCC
Q 038568 262 ERERDHRMVFAEALWGHTGALLCLINVGD--LLAS--GSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSA 337 (357)
Q Consensus 262 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~--~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 337 (357)
|+.++.... .+. +...+.++.|.++ .+++ |+.|+.|++||+.++ +++..+.+|.+.|++++|+|++.
T Consensus 307 d~~t~~~~~---~~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~---~~v~~l~gH~~~V~~l~~spdg~-- 377 (420)
T 4gga_A 307 NVCSGACLS---AVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM---AKVAELKGHTSRVLSLTMSPDGA-- 377 (420)
T ss_dssp ETTTTEEEE---EEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS--
T ss_pred eCCccccce---eec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCCCC--
Confidence 999887543 333 3345677777665 5544 447999999999987 67888999999999999999998
Q ss_pred CCCeEEEEEcCCCCeEEecC
Q 038568 338 SNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 338 ~~~~~~l~s~~~dg~v~~wd 357 (357)
+|+|||.||+|++||
T Consensus 378 -----~l~S~s~D~tvriWd 392 (420)
T 4gga_A 378 -----TVASAAADETLRLWR 392 (420)
T ss_dssp -----CEEEEETTTEEEEEC
T ss_pred -----EEEEEecCCeEEEEE
Confidence 999999999999997
No 38
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.9e-42 Score=286.70 Aligned_cols=277 Identities=12% Similarity=0.170 Sum_probs=225.0
Q ss_pred CccceeEEEEe--c-ceEEEeeC---C-ceEEEeccCCccccceec-cccCCCCceEEEEEecC---c--eEEeecCCeE
Q 038568 28 HHMIISCLAVH--N-SLLYAASL---N-EINVFDLISDYSHVDTFS-NDLSSSGSVKSITFHIT---K--IFTAHQDCKI 94 (357)
Q Consensus 28 h~~~i~~~~~s--~-~~l~t~~~---d-~i~iw~~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~---~--l~~~~~d~~i 94 (357)
|.+.|++++|+ + .++++|+. | .|++||+ .+++...... + |..+|.+++|+|+ + |++++.||.|
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~-~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEI-QHGDLKLLREIE---KAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEE-CSSSEEEEEEEE---ESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeC-CCCcccceeeec---ccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 99999999999 5 45566765 8 9999999 7766544332 4 8999999999997 3 9999999999
Q ss_pred EEEecCCcc-ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE------ec--CeEEEEecCCeEE
Q 038568 95 RVWKITASR-QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV------KQ--GLMYSVSWDRSFK 165 (357)
Q Consensus 95 ~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~--~~l~~~~~dg~i~ 165 (357)
++||+.+++ ....+ .+|...|.++.| ++ ++|++++.||.|+
T Consensus 93 ~iwd~~~~~~~~~~~------------------------------~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~ 142 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSV------------------------------KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK 142 (357)
T ss_dssp EEECTTSCSSCSEEE------------------------------CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE
T ss_pred EEEeCCCCCccEEEE------------------------------EecccceEEEeeccccccCCCccEEEEEeCCCeEE
Confidence 999999876 33222 278899999966 45 6999999999999
Q ss_pred EEEcCcch-hhhhcccccc----ccEEEEE----EecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeecccc
Q 038568 166 IWNASNYK-CLESVNKAHE----DAVNAVV----VSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRS 235 (357)
Q Consensus 166 iwd~~~~~-~~~~~~~~~~----~~v~~~~----~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
+||+++++ .+..+ ..+. ..+.+++ |+|++ .+++++.|+.|++||++ .... .....|..
T Consensus 143 vwd~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~----------~~~~-~~~~~~~~ 210 (357)
T 3i2n_A 143 VWDPRQKDDPVANM-EPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR----------NMAL-RWETNIKN 210 (357)
T ss_dssp EECTTSCSSCSEEE-CCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETT----------TTEE-EEEEECSS
T ss_pred EEeCCCCCCcceec-cccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECc----------cCce-eeecCCCC
Confidence 99999886 55555 3333 3888998 66777 69999999999999998 2222 33456889
Q ss_pred ceeEEEEec---CCCEEEEEecCCeEEEEecccCCceeeee--eccCCccceEEEeecCc---eEEEecCCCeEEEeeCC
Q 038568 236 TVNALALNG---DGSLLFSGGCDRWIVVWERERDHRMVFAE--ALWGHTGALLCLINVGD---LLASGSADRTVRIWQRG 307 (357)
Q Consensus 236 ~v~~~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~ 307 (357)
.|.+++|+| ++.+|++++.||.|++||+++.+...... .+.+|...|.+++|+++ +|++++.||.|++||++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 999999999 89999999999999999998765433222 34489999999999886 79999999999999998
Q ss_pred CCcce----------------eeeeeecCCcCceEEEEEeeCCCCCCCCeEEEE-EcCCCCeEEecC
Q 038568 308 KENCY----------------RCMAFLEGHEKPVKSLVAISSSSSASNGIVSIG-SGSLNGEIKVWD 357 (357)
Q Consensus 308 ~~~~~----------------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~-s~~~dg~v~~wd 357 (357)
++... +.+..+.+|..+|++++|+|+++ +|+ +++.||.|++||
T Consensus 291 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 291 YPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR-------GLCVCSSFDQTVRVLI 350 (357)
T ss_dssp CCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST-------TEEEEEETTSEEEEEE
T ss_pred CCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC-------eEEEEecCCCcEEEEE
Confidence 65432 56778899999999999999998 777 899999999997
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.9e-43 Score=294.46 Aligned_cols=294 Identities=14% Similarity=0.141 Sum_probs=220.4
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCc--cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecC
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDY--SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKIT 100 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~ 100 (357)
|.++|++++|+ +++||+|+.| .|+|||+ .++ +.+..+.+ |...|.+++|+|++ |++++.|++|++||+.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~-~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQ-DGNGWKHARTFSD---HDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEE-ETTEEEECCCBCC---CSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEc-cCCceEEEEEEec---CCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 66799999999 8999999999 9999999 776 77888887 99999999999986 9999999999999998
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchh---h
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKC---L 175 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~---~ 175 (357)
+++.......+ ..|...|.+++|+| ++|++++.|+.|++||+++++. .
T Consensus 86 ~~~~~~~~~~~---------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 138 (377)
T 3dwl_C 86 PDGTWKQTLVL---------------------------LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVS 138 (377)
T ss_dssp ---CCCCEEEC---------------------------CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCC
T ss_pred CCCceeeeeEe---------------------------cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceee
Confidence 87622222221 27899999999999 8999999999999999998873 5
Q ss_pred hhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccccccc--------ccceeeeeEeeccccceeEEEEecCC
Q 038568 176 ESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKER--------KSRHMLVTTLVKHRSTVNALALNGDG 246 (357)
Q Consensus 176 ~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~ 246 (357)
..+...|...|.+++|+|++ +|++++.|+.|++||++........ .....+...+ .|...|.+++|+|++
T Consensus 139 ~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 139 KHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG 217 (377)
T ss_dssp EEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS
T ss_pred eEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC
Confidence 66623389999999999998 6999999999999998632211100 0124455555 899999999999999
Q ss_pred CEEEEEecCCeEEEEecccCCcee-eeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc-c-----------
Q 038568 247 SLLFSGGCDRWIVVWERERDHRMV-FAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN-C----------- 311 (357)
Q Consensus 247 ~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~-~----------- 311 (357)
++|++++.||.|++||+++++... ....+.+|...+.+++|+++ +|++++.++.+ +|+..... .
T Consensus 218 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T 3dwl_C 218 NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSK 296 (377)
T ss_dssp SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCC
T ss_pred CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccc
Confidence 999999999999999999887521 25567789999999999876 88888777666 66654211 0
Q ss_pred ---------------eee---------e-------------eeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEE
Q 038568 312 ---------------YRC---------M-------------AFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIK 354 (357)
Q Consensus 312 ---------------~~~---------~-------------~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~ 354 (357)
... + .....|.+.|+++.+.+... .....|+|||.||.|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~---~~~~~~~s~g~Dg~i~ 373 (377)
T 3dwl_C 297 TSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTP---GNITAFTSSGTDGRVV 373 (377)
T ss_dssp CCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEET---TEEEEEEEEETTSEEE
T ss_pred cccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCC---CceEEEEeecCCCcEE
Confidence 000 0 01123999999999887653 1122599999999999
Q ss_pred ecC
Q 038568 355 VWD 357 (357)
Q Consensus 355 ~wd 357 (357)
+||
T Consensus 374 iWd 376 (377)
T 3dwl_C 374 LWT 376 (377)
T ss_dssp EEC
T ss_pred Eec
Confidence 997
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-43 Score=298.76 Aligned_cols=279 Identities=16% Similarity=0.171 Sum_probs=233.6
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCC----ccccceeccccCCCCceEEEEEecC-c--eEEeecCCeEEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISD----YSHVDTFSNDLSSSGSVKSITFHIT-K--IFTAHQDCKIRVW 97 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~----~~~~~~~~~~~~~~~~v~~l~~~~~-~--l~~~~~d~~i~vw 97 (357)
|...|++++|+ +++|++|+.| .|++||+ .. .+.+..+.+ |...|.+++|+|+ . |++++.|+.|++|
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYST-NEANNAINSMARFSN---HSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECC-SSTTSCCCEEEECCC---SSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeec-ccccccccchhhccC---CccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 89999999999 8999999999 9999999 65 346777777 9999999999997 4 9999999999999
Q ss_pred ecCCcc------ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEE
Q 038568 98 KITASR------QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWN 168 (357)
Q Consensus 98 d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd 168 (357)
|+.+++ ....+. ....|...|.+++|+| .++++++.||.|++||
T Consensus 142 d~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 194 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPG---------------------------QSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWD 194 (416)
T ss_dssp BTTTTSSCTTTCCCBCCC---------------------------CSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEE
T ss_pred ECCCCccccccccccccc---------------------------cccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEE
Confidence 998775 211111 1127889999999998 6899999999999999
Q ss_pred cCcchhhhhccccc------cccEEEEEEecCC--eEEEEeCCC---eEEEEEccccccccccccceeeeeEee-ccccc
Q 038568 169 ASNYKCLESVNKAH------EDAVNAVVVSDNG--VVYTGSADG---RIRVWERSVVDHNKERKSRHMLVTTLV-KHRST 236 (357)
Q Consensus 169 ~~~~~~~~~~~~~~------~~~v~~~~~~~~~--~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~ 236 (357)
+++++.+..+ ..+ ...+.+++|+|++ .+++++.|+ .|++||++. ...+...+. +|...
T Consensus 195 ~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~---------~~~~~~~~~~~~~~~ 264 (416)
T 2pm9_A 195 LKAKKEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRN---------ANTPLQTLNQGHQKG 264 (416)
T ss_dssp TTTTEEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTS---------TTSCSBCCCSCCSSC
T ss_pred CCCCCcceEE-eccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCC---------CCCCcEEeecCccCc
Confidence 9998888777 444 7889999999987 589999998 999999982 123455566 79999
Q ss_pred eeEEEEec-CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCcce
Q 038568 237 VNALALNG-DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCY 312 (357)
Q Consensus 237 v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~ 312 (357)
|.+++|+| ++++|++++.||.|++||+++++ ....+.+|...+.+++|+++ +|++++.||.|++|++.+....
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCC---EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc---cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 99999999 99999999999999999999886 44566689999999999874 8999999999999999876422
Q ss_pred eee--------------------------------eeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 313 RCM--------------------------------AFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 313 ~~~--------------------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
... .....|..++++++|+|+++ +|++++.||.|+|||
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 342 LDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK-------LVQITPDGKGVSITN 411 (416)
T ss_dssp SCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-------EECBCTTSSCBCCBC
T ss_pred cccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe-------EEEEeCCCCeEEEEE
Confidence 111 11122678889999999998 999999999999997
No 41
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=274.02 Aligned_cols=273 Identities=15% Similarity=0.245 Sum_probs=224.1
Q ss_pred eeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceee
Q 038568 32 ISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQL 107 (357)
Q Consensus 32 i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~ 107 (357)
.++|+|| +++||+|. | +|+|||+ ++++.++.+... .|...|++++|+|++ |++|+.||+|++||+++++....
T Consensus 28 ~~~l~WS~~~~lAvg~-D~tV~iWd~-~tg~~~~~~~~~-~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVAL-DNSVYLWSA-SSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECTTSEEEEEE-TTEEEEEET-TTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECCCCEEEEEe-CCEEEEEEC-CCCCEEEEEEec-CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 5789999 77888775 7 9999999 888888877532 288899999999987 99999999999999998875544
Q ss_pred eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhccccccccEE
Q 038568 108 VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVN 187 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 187 (357)
+. +|...+.++.+.+..+++++.++.+++|+.............|...+.
T Consensus 105 ~~------------------------------~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (318)
T 4ggc_A 105 MT------------------------------SHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVC 154 (318)
T ss_dssp EE------------------------------CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred ec------------------------------CccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceE
Confidence 33 788899999888899999999999999998876544333378999999
Q ss_pred EEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCE---EEEEecCCeEEEEec
Q 038568 188 AVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL---LFSGGCDRWIVVWER 263 (357)
Q Consensus 188 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~dg~i~vwd~ 263 (357)
.+.+.+++ ++++++.|+.|++||++ ..............+...|.+++++|++.. +++++.++.|++||.
T Consensus 155 ~~~~~~~~~~l~s~~~d~~i~iwd~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 155 GLRWAPDGRHLASGGNDNLVNVWPSA------PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEESS------CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred EEEEcCCCCEEEEEecCcceeEEECC------CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 99999998 69999999999999998 333344455666678889999999996653 346678999999999
Q ss_pred ccCCceeeeeeccCCccceEEEeecCc--eEE--EecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCC
Q 038568 264 ERDHRMVFAEALWGHTGALLCLINVGD--LLA--SGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASN 339 (357)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~--~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 339 (357)
+....... ..+...+..+.+.+. .++ +|+.|+.|++||++++ +++..+.+|.++|++++|+|+++
T Consensus 229 ~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~---~~~~~l~gH~~~V~~l~~spdg~---- 297 (318)
T 4ggc_A 229 CSGACLSA----VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM---AKVAELKGHTSRVLSLTMSPDGA---- 297 (318)
T ss_dssp TTCCEEEE----EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS----
T ss_pred cccccccc----ccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCC---cEEEEEcCCCCCEEEEEEcCCCC----
Confidence 87764322 235566777777665 443 4558999999999987 67888999999999999999998
Q ss_pred CeEEEEEcCCCCeEEecC
Q 038568 340 GIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 340 ~~~~l~s~~~dg~v~~wd 357 (357)
+|+|||.||+|+|||
T Consensus 298 ---~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 298 ---TVASAAADETLRLWR 312 (318)
T ss_dssp ---CEEEEETTTEEEEEC
T ss_pred ---EEEEEecCCeEEEEE
Confidence 999999999999997
No 42
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-41 Score=290.51 Aligned_cols=288 Identities=12% Similarity=0.129 Sum_probs=237.8
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~ 102 (357)
|.+.|++++|+ +++|++|+.| .|++||. +++.+..+.. |...|.+++|+|++ |++++.|+.|++||+.++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~--~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 181 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK--TGALLNVLNF---HRAPIVSVKWNKDGTHIISMDVENVTILWNVISG 181 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET--TSCEEEEECC---CCSCEEEEEECTTSSEEEEEETTCCEEEEETTTT
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC--CCCeeeeccC---CCccEEEEEECCCCCEEEEEecCCeEEEEECCCC
Confidence 68899999999 8999999999 9999995 5577788887 99999999999987 999999999999999887
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhcccc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVNKA 181 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 181 (357)
+....+........... ..........+.+++|++ ..+++++.+|.|++||+++++.+..+ ..
T Consensus 182 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~-~~ 245 (425)
T 1r5m_A 182 TVMQHFELKETGGSSIN---------------AENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKL-IG 245 (425)
T ss_dssp EEEEEECCC------------------------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEE-CC
T ss_pred cEEEEeeccccCcccee---------------eccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeee-cc
Confidence 65544432111000000 000012223388999999 88999999999999999999888888 78
Q ss_pred ccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEE
Q 038568 182 HEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV 260 (357)
Q Consensus 182 ~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 260 (357)
|...|.+++|+|++ .|++++.|+.|++||++ .......+..|...|.+++|+|++ ++++++.|+.|++
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~----------~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i 314 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASDDGTLRIWHGG----------NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRL 314 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEECSS----------SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECC----------CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEE
Confidence 99999999999998 69999999999999998 345566677899999999999999 9999999999999
Q ss_pred EecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc-----------------ceeeeeeecCC
Q 038568 261 WERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN-----------------CYRCMAFLEGH 321 (357)
Q Consensus 261 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~-----------------~~~~~~~~~~h 321 (357)
||+++++ ....+..|...+.+++|+++ +|++++.||.|++||+.+++ ....+..+.+|
T Consensus 315 ~d~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (425)
T 1r5m_A 315 WSLKQNT---LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSS 391 (425)
T ss_dssp EETTTTE---EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCT
T ss_pred EECCCCc---EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCc
Confidence 9999876 34455678889999999876 99999999999999998762 11167888899
Q ss_pred cC--ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 322 EK--PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 322 ~~--~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.. .|++++|+|+++ +|++++.||.|++||
T Consensus 392 ~~~~~v~~~~~s~~~~-------~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 392 QDNDYIFDLSWNCAGN-------KISVAYSLQEGSVVA 422 (425)
T ss_dssp TCCCCEEEEEECTTSS-------EEEEEESSSCCEEEE
T ss_pred ccCCceEEEEccCCCc-------eEEEEecCceEEEEe
Confidence 76 999999999998 999999999999996
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.8e-41 Score=272.52 Aligned_cols=247 Identities=19% Similarity=0.284 Sum_probs=200.6
Q ss_pred eeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccc
Q 038568 64 TFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEH 141 (357)
Q Consensus 64 ~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
.+.+ |...|++++|+|++ |++|+.|++|++||+..... ..+.. +.+|
T Consensus 4 ~~~~---h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-~~~~~---------------------------l~gH 52 (297)
T 2pm7_B 4 IANA---HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-KLIDT---------------------------LTGH 52 (297)
T ss_dssp ECCS---CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-CCCEE---------------------------ECCC
T ss_pred eccC---CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-EEEEE---------------------------Eccc
Confidence 3455 99999999999987 99999999999999975321 11111 2389
Q ss_pred cccEEEEEEec----CeEEEEecCCeEEEEEcCcch--hhhhccccccccEEEEEEecC--C-eEEEEeCCCeEEEEEcc
Q 038568 142 WDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDN--G-VVYTGSADGRIRVWERS 212 (357)
Q Consensus 142 ~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~d~~i~i~d~~ 212 (357)
..+|.+++|++ ++|++|+.|++|++||+++++ .+..+ ..|...|.+++|+|+ + +|++++.|+.|++||++
T Consensus 53 ~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~ 131 (297)
T 2pm7_B 53 EGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFK 131 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBC
T ss_pred cCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEec
Confidence 99999999974 689999999999999998764 44445 678999999999997 5 69999999999999997
Q ss_pred ccccccccccceeeeeEeeccccceeEEEEecC-------------CCEEEEEecCCeEEEEecccCCce-eeeeeccCC
Q 038568 213 VVDHNKERKSRHMLVTTLVKHRSTVNALALNGD-------------GSLLFSGGCDRWIVVWERERDHRM-VFAEALWGH 278 (357)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~ 278 (357)
. .. ......+.+|...|.+++|+|+ +++|++|+.|+.|++||++++... .....+.+|
T Consensus 132 ~------~~--~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 132 E------NG--TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp S------SS--CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred C------CC--ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 2 11 1113456789999999999996 579999999999999999876532 244567899
Q ss_pred ccceEEEeecCc-----eEEEecCCCeEEEeeCCCCcceeeeeee--cCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCC
Q 038568 279 TGALLCLINVGD-----LLASGSADRTVRIWQRGKENCYRCMAFL--EGHEKPVKSLVAISSSSSASNGIVSIGSGSLNG 351 (357)
Q Consensus 279 ~~~v~~~~~~~~-----~l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg 351 (357)
...|.+++|+|+ +|++++.|++|++||++++........+ ..|...|.+++|+|+++ +|++++.||
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-------~las~~~D~ 276 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-------VLALSGGDN 276 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-------CEEEEETTS
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC-------EEEEEcCCC
Confidence 999999999873 8999999999999999874311112222 57888999999999998 999999999
Q ss_pred eEEecC
Q 038568 352 EIKVWD 357 (357)
Q Consensus 352 ~v~~wd 357 (357)
.|++|+
T Consensus 277 ~v~lw~ 282 (297)
T 2pm7_B 277 KVTLWK 282 (297)
T ss_dssp CEEEEE
T ss_pred cEEEEE
Confidence 999995
No 44
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-40 Score=276.84 Aligned_cols=241 Identities=18% Similarity=0.270 Sum_probs=209.0
Q ss_pred cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 60 SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 60 ~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
+...++.+ |.+.|.+++|+|++ |++++.||+|++||+.+++....+.
T Consensus 46 ~~~~~l~g---H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~---------------------------- 94 (340)
T 1got_B 46 RTRRTLRG---HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP---------------------------- 94 (340)
T ss_dssp CEEEEECC---CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE----------------------------
T ss_pred hhheeecC---CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee----------------------------
Confidence 44566777 99999999999987 9999999999999998876544332
Q ss_pred cccccccEEEEEEec--CeEEEEecCCeEEEEEcCcch----hhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEc
Q 038568 138 WLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYK----CLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWER 211 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~ 211 (357)
.|...|.+++|+| +++++++.|+.|++||+.+.+ ....+ .+|...+.++.|++++.+++++.|+.|++||+
T Consensus 95 --~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~ 171 (340)
T 1got_B 95 --LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL-AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171 (340)
T ss_dssp --CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEE-ECCSSCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred --cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEe-cCCCccEEEEEECCCCcEEEEECCCcEEEEEC
Confidence 7888999999999 899999999999999998753 23344 67899999999999999999999999999999
Q ss_pred cccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-
Q 038568 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD- 290 (357)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 290 (357)
+ .......+.+|...|.+++|+|+++++++|+.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 172 ~----------~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~---~~~~~~~h~~~v~~v~~~p~~ 238 (340)
T 1got_B 172 E----------TGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM---CRQTFTGHESDINAICFFPNG 238 (340)
T ss_dssp T----------TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEECTTS
T ss_pred C----------CCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe---eEEEEcCCcCCEEEEEEcCCC
Confidence 8 455677888999999999999999999999999999999999876 44567789999999999876
Q ss_pred -eEEEecCCCeEEEeeCCCCcceeeeeeec--CCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 291 -LLASGSADRTVRIWQRGKENCYRCMAFLE--GHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 291 -~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|++|+.||.|++||+++++ .+..+. .+...|++++|+|+++ +|++|+.||.|++||
T Consensus 239 ~~l~s~s~d~~v~iwd~~~~~---~~~~~~~~~~~~~v~~~~~s~~g~-------~l~~g~~d~~i~vwd 298 (340)
T 1got_B 239 NAFATGSDDATCRLFDLRADQ---ELMTYSHDNIICGITSVSFSKSGR-------LLLAGYDDFNCNVWD 298 (340)
T ss_dssp SEEEEEETTSCEEEEETTTTE---EEEEECCTTCCSCEEEEEECTTSS-------EEEEEETTSEEEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCc---EEEEEccCCcccceEEEEECCCCC-------EEEEECCCCeEEEEE
Confidence 99999999999999999873 333333 3445799999999998 999999999999997
No 45
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-40 Score=282.29 Aligned_cols=271 Identities=17% Similarity=0.245 Sum_probs=227.4
Q ss_pred ceeEEEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceee
Q 038568 31 IISCLAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQL 107 (357)
Q Consensus 31 ~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~ 107 (357)
.+.+++|+++.+++++.| .|++||+ .+++....+.. .|...|.+++|+|++ |++++.||.|++||+.+++....
T Consensus 95 ~~~~~~~s~~~l~~~~~d~~v~lw~~-~~~~~~~~~~~--~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 95 YLNLLDWSNLNVVAVALERNVYVWNA-DSGSVSALAET--DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp TCBCEEECTTSEEEEEETTEEEEEET-TTCCEEEEEEC--CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred eEEEEeecCCCEEEEECCCeEEEeeC-CCCcEeEeeec--CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE
Confidence 355677777778888888 9999999 88887776664 378999999999987 99999999999999988765443
Q ss_pred eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCc-chhhhhccccccccE
Q 038568 108 VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASN-YKCLESVNKAHEDAV 186 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v 186 (357)
+. +|...|.+++|+++.+++++.||.|++||++. ...+..+ ..|...|
T Consensus 172 ~~------------------------------~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v 220 (401)
T 4aez_A 172 MA------------------------------GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL-QGHSSEV 220 (401)
T ss_dssp EC------------------------------CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCE
T ss_pred ec------------------------------CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEE-cCCCCCe
Confidence 32 78899999999889999999999999999984 4555566 7899999
Q ss_pred EEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCC-EEEEEe--cCCeEEEEe
Q 038568 187 NAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS-LLFSGG--CDRWIVVWE 262 (357)
Q Consensus 187 ~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~dg~i~vwd 262 (357)
.+++|+|++ .|++++.|+.|++||++ .......+..|...|.+++|+|++. ++++++ .|+.|++||
T Consensus 221 ~~~~~~~~~~~l~s~~~d~~v~iwd~~----------~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 221 CGLAWRSDGLQLASGGNDNVVQIWDAR----------SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETT----------CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred eEEEEcCCCCEEEEEeCCCeEEEccCC----------CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 999999998 69999999999999998 3456667778999999999999765 566654 799999999
Q ss_pred cccCCceeeeeeccCCccceEEEeecCc--eEEE--ecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCC
Q 038568 263 RERDHRMVFAEALWGHTGALLCLINVGD--LLAS--GSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSAS 338 (357)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~--~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 338 (357)
+++++....+ .+...+.+++|+++ ++++ |+.||.|++||+.+++ ......+.+|...|++++|+|++.
T Consensus 291 ~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~-~~~~~~~~~h~~~v~~~~~s~dg~--- 362 (401)
T 4aez_A 291 AATGARVNTV----DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSG-LTKQVDIPAHDTRVLYSALSPDGR--- 362 (401)
T ss_dssp TTTCCEEEEE----ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTE-EEEEEEEECCSSCCCEEEECTTSS---
T ss_pred CCCCCEEEEE----eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcc-ceeEEEecCCCCCEEEEEECCCCC---
Confidence 9988754333 25678999999876 7777 5589999999998863 234455778999999999999998
Q ss_pred CCeEEEEEcCCCCeEEecC
Q 038568 339 NGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 339 ~~~~~l~s~~~dg~v~~wd 357 (357)
+|++++.||.|++||
T Consensus 363 ----~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 363 ----ILSTAASDENLKFWR 377 (401)
T ss_dssp ----EEEEECTTSEEEEEE
T ss_pred ----EEEEEeCCCcEEEEE
Confidence 999999999999996
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.7e-41 Score=283.85 Aligned_cols=270 Identities=16% Similarity=0.200 Sum_probs=195.2
Q ss_pred EEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeec------CCeEEEEecCCcc
Q 038568 34 CLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQ------DCKIRVWKITASR 103 (357)
Q Consensus 34 ~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~------d~~i~vwd~~~~~ 103 (357)
.+.+. .++++.++.+ ....|++ ....+ .. |...|++++|+||+ |++++. |+.|++|+..++.
T Consensus 10 g~d~g~~~~~~~~~g~~~~~~w~~-p~~~p----~~---H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~ 81 (357)
T 4g56_B 10 GVDLGTENLYFQSNGSSKGSAWGR-PVTAP----AC---MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGA 81 (357)
T ss_dssp -----------------------------------C---CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC--
T ss_pred CCCCCccceEEecCCCccccccCC-CCCCc----cc---ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCC
Confidence 34444 4555666666 9999998 54322 34 99999999999998 888887 7789999887664
Q ss_pred ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhcc---
Q 038568 104 QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVN--- 179 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~--- 179 (357)
....+.. ...+|...|.+++|+| +.+++++.||+|++||+.+++......
T Consensus 82 ~~~~~~~--------------------------~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~ 135 (357)
T 4g56_B 82 PNESLCT--------------------------AGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAK 135 (357)
T ss_dssp -CGGGCS--------------------------EEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEE
T ss_pred cceeEec--------------------------ccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeecc
Confidence 3222111 1127888999999999 888899999999999999887654331
Q ss_pred ccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCC-EEEEEecCCe
Q 038568 180 KAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS-LLFSGGCDRW 257 (357)
Q Consensus 180 ~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~ 257 (357)
.+|...|.+++|+|++ +|++++.|+.|++||++ ..+.+..+.+|...|++++|+|++. ++++++.||.
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~----------~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~ 205 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLS----------QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGR 205 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETT----------TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSC
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC----------CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCc
Confidence 3688999999999998 69999999999999998 4567778889999999999999875 7899999999
Q ss_pred EEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCC
Q 038568 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSS 334 (357)
Q Consensus 258 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 334 (357)
|++||+++++..... ....|...+.+++|+|+ +|++|+.|+.|++||++++ +.+..+.+|...|++++|+|++
T Consensus 206 v~~wd~~~~~~~~~~-~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~---~~~~~~~~~~~~v~~l~~sp~~ 281 (357)
T 4g56_B 206 ILLWDTRKPKPATRI-DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP---DSAQTSAVHSQNITGLAYSYHS 281 (357)
T ss_dssp EEECCTTSSSCBCBC-CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG---GGCEEECCCSSCEEEEEECSSS
T ss_pred eEEEECCCCceeeee-eeccccccccchhhhhcccceEEEeecccceeEEECCCC---cEeEEEeccceeEEEEEEcCCC
Confidence 999999987754322 34457788999999865 8999999999999999987 5677888999999999999987
Q ss_pred CCCCCCeEEEEEcCCCCeEEecC
Q 038568 335 SSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 335 ~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
. .+|++|+.||+|+|||
T Consensus 282 ~------~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 282 S------PFLASISEDCTVAVLD 298 (357)
T ss_dssp S------CCEEEEETTSCEEEEC
T ss_pred C------CEEEEEeCCCEEEEEE
Confidence 4 2799999999999997
No 47
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-40 Score=269.91 Aligned_cols=249 Identities=19% Similarity=0.255 Sum_probs=201.4
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCC--ccccceeccccCCCCceEEEEEecC--c--eEEeecCCeEEEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISD--YSHVDTFSNDLSSSGSVKSITFHIT--K--IFTAHQDCKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~--~~~~~~~~~~~~~~~~v~~l~~~~~--~--l~~~~~d~~i~vwd 98 (357)
|.+.|++++|+ |++||+|+.| +|+|||+ +. .+.+.++.+ |.++|.+++|+++ + |++++.|++|++||
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~-~~~~~~~~~~l~g---H~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEV-EGETHKLIDTLTG---HEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEB-CSSCBCCCEEECC---CSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEec-CCCCcEEEEEEcc---ccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 99999999999 9999999999 9999999 53 467788888 9999999999852 2 99999999999999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEEEEcCcchh
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKC 174 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~ 174 (357)
+++++.... .. +..|...|.+++|+| .+|++++.|+.|++||++++..
T Consensus 84 ~~~~~~~~~-~~---------------------------~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 84 EENGRWSQI-AV---------------------------HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp BSSSCBCCC-EE---------------------------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC
T ss_pred cCCCceEEE-EE---------------------------eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc
Confidence 987642111 11 127889999999998 4899999999999999987642
Q ss_pred --hhhccccccccEEEEEEecC-------------C-eEEEEeCCCeEEEEEccccccccccccceeeeeEeecccccee
Q 038568 175 --LESVNKAHEDAVNAVVVSDN-------------G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN 238 (357)
Q Consensus 175 --~~~~~~~~~~~v~~~~~~~~-------------~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (357)
...+ ..|...|.+++|+|+ + +|++|+.|+.|++||++ ...........+.+|...|.
T Consensus 136 ~~~~~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~------~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 136 TSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN------SDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp BCCEEE-ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEE------TTTTEEEEEEEECCCSSCEE
T ss_pred eeeeee-ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEc------CCCceEEEEEEecCCCCceE
Confidence 2334 688999999999996 2 69999999999999997 32223345667889999999
Q ss_pred EEEEecCC---CEEEEEecCCeEEEEecccCCceeeeeec--cCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcc
Q 038568 239 ALALNGDG---SLLFSGGCDRWIVVWERERDHRMVFAEAL--WGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENC 311 (357)
Q Consensus 239 ~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~ 311 (357)
+++|+|++ .+|++++.|++|++||+++.........+ ..|...+.+++|+++ +|++++.||.|++|+......
T Consensus 209 ~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~ 288 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (297)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred EEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCc
Confidence 99999984 79999999999999999865321111222 467888999999876 999999999999999875433
Q ss_pred eeee
Q 038568 312 YRCM 315 (357)
Q Consensus 312 ~~~~ 315 (357)
+.++
T Consensus 289 w~~~ 292 (297)
T 2pm7_B 289 WEPA 292 (297)
T ss_dssp EEEC
T ss_pred EEec
Confidence 4433
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-41 Score=290.23 Aligned_cols=276 Identities=13% Similarity=0.211 Sum_probs=228.9
Q ss_pred CccceeEEEEe--cc-eEEEe----------eCC-ceEEEeccCCcc---ccceeccccCCCCceEEEEEecCc--eEEe
Q 038568 28 HHMIISCLAVH--NS-LLYAA----------SLN-EINVFDLISDYS---HVDTFSNDLSSSGSVKSITFHITK--IFTA 88 (357)
Q Consensus 28 h~~~i~~~~~s--~~-~l~t~----------~~d-~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~l~~~~~~--l~~~ 88 (357)
+...|.+++|+ ++ +|++| +.| .|+|||+ .+++ .+..+. |...|.+++|+|++ |+++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~-~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~ 85 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSL-LAADSEKPIASLQ----VDSKFNDLDWSHNNKIIAGA 85 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEES-SSGGGCSCSCCCC----CSSCEEEEEECSSSSCEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEc-cCCCCCcEEEEEe----cCCceEEEEECCCCCeEEEE
Confidence 56789999999 55 89999 889 9999999 7665 334443 89999999999987 9999
Q ss_pred ecCCeEEEEecCCccce-eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeE
Q 038568 89 HQDCKIRVWKITASRQH-QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSF 164 (357)
Q Consensus 89 ~~d~~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i 164 (357)
+.||.|++||+...... ..+..+ .+|...|.+++|+| .+|++++.||.|
T Consensus 86 ~~dg~v~vw~~~~~~~~~~~~~~~---------------------------~~h~~~v~~~~~~~~~~~~l~s~~~dg~v 138 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAINSMARF---------------------------SNHSSSVKTVKFNAKQDNVLASGGNNGEI 138 (416)
T ss_dssp ESSSCEEEECCSSTTSCCCEEEEC---------------------------CCSSSCCCEEEECSSSTTBEEEECSSSCE
T ss_pred ccCCeEEEeecccccccccchhhc---------------------------cCCccceEEEEEcCCCCCEEEEEcCCCeE
Confidence 99999999999873211 122222 27899999999997 689999999999
Q ss_pred EEEEcCcch------hhhhc--cccccccEEEEEEecC-C-eEEEEeCCCeEEEEEccccccccccccceeeeeEeecc-
Q 038568 165 KIWNASNYK------CLESV--NKAHEDAVNAVVVSDN-G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKH- 233 (357)
Q Consensus 165 ~iwd~~~~~------~~~~~--~~~~~~~v~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~- 233 (357)
++||+++++ ....+ ...|...|.+++|+|+ + .|++++.|+.|++||++ .......+..+
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~----------~~~~~~~~~~~~ 208 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLK----------AKKEVIHLSYTS 208 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETT----------TTEEEEEECCCC
T ss_pred EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC----------CCCcceEEeccc
Confidence 999998876 22221 1568889999999998 4 69999999999999998 33445555554
Q ss_pred -----ccceeEEEEecCC-CEEEEEecCC---eEEEEecccCCceeeeeecc-CCccceEEEeecC-c--eEEEecCCCe
Q 038568 234 -----RSTVNALALNGDG-SLLFSGGCDR---WIVVWERERDHRMVFAEALW-GHTGALLCLINVG-D--LLASGSADRT 300 (357)
Q Consensus 234 -----~~~v~~~~~~~~~-~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~--~l~~~~~dg~ 300 (357)
...|.+++|+|++ .++++++.|+ .|++||+++... ....+. +|...+.+++|++ + +|++++.||.
T Consensus 209 ~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 209 PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT--PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT 286 (416)
T ss_dssp CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS--CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE
T ss_pred cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC--CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC
Confidence 7889999999987 6899999998 999999998643 344566 7999999999976 3 9999999999
Q ss_pred EEEeeCCCCcceeeeeeecCCcCceEEEEEeeCC-CCCCCCeEEEEEcCCCCeEEecC
Q 038568 301 VRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSS-SSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 301 i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++||++++ +.+..+.+|...|++++|+|++ . +|++++.||.|++||
T Consensus 287 v~~wd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~-------~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 287 VLLWNPESA---EQLSQFPARGNWCFKTKFAPEAPD-------LFACASFDNKIEVQT 334 (416)
T ss_dssp EEEECSSSC---CEEEEEECSSSCCCCEEECTTCTT-------EEEECCSSSEEEEEE
T ss_pred EEEeeCCCC---ccceeecCCCCceEEEEECCCCCC-------EEEEEecCCcEEEEE
Confidence 999999987 6677888999999999999998 6 999999999999996
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.3e-40 Score=277.76 Aligned_cols=282 Identities=10% Similarity=0.069 Sum_probs=214.4
Q ss_pred ccceeEEEEe--cceEEEeeCC--------ceEEEeccCCcccc----------ceeccccCCCCceEEEEEecCceEEe
Q 038568 29 HMIISCLAVH--NSLLYAASLN--------EINVFDLISDYSHV----------DTFSNDLSSSGSVKSITFHITKIFTA 88 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~d--------~i~iw~~~~~~~~~----------~~~~~~~~~~~~v~~l~~~~~~l~~~ 88 (357)
.-||+|++|+ +++|++|+.| .|++|++ +..... ..+.. |...|.++++.++.++++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~-~~~~~~~~~~~~~~~~~~l~~---~~~~v~s~~~~~~~~~~g 89 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRV-DPTKDTEKEQFHILSEFALED---NDDSPTAIDASKGIILVG 89 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEE-CTTSSSHHHHEEEEEEEECCT---TSCCCCEEEEETTEEEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEE-cCCCcceeeeeeeeeEEEccC---CCCceEEEEeCCCEEEEE
Confidence 3589999999 8899998754 4999998 543221 12344 888999999987765554
Q ss_pred -----------ecCCeEEEEecCCccceeee-eecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--Ce
Q 038568 89 -----------HQDCKIRVWKITASRQHQLV-STLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GL 154 (357)
Q Consensus 89 -----------~~d~~i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~ 154 (357)
+.|+.+++|++......... .... ......+...+.+++|+| ++
T Consensus 90 ~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~v~fSpDg~~ 147 (365)
T 4h5i_A 90 CNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVD----------------------FDASTNADDYTKLVYISREGTV 147 (365)
T ss_dssp CCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEEC----------------------SSCCCCTTCCEEEEEECTTSSC
T ss_pred ECCCccEEEEecCCCcEEEEEecCCCceEEEeeeec----------------------eeecCCcccCEEEEEEcCCCCE
Confidence 45778999988765432211 1110 001124556789999999 66
Q ss_pred EE--EEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEee
Q 038568 155 MY--SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV 231 (357)
Q Consensus 155 l~--~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 231 (357)
++ +++.|++|++||+++++++..+ .|...|.+++|+|++. +++++ ++.+++|+.. .. .........
T Consensus 148 la~as~~~d~~i~iwd~~~~~~~~~~--~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~------~~--~~~~~~~~~ 216 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTEKFEI--ETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTV------TG--SCIARKTDF 216 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEEEEEE--ECSSCCCEEEECTTSSEEEEEC-SSCEEEEETT------TC--CEEEEECCC
T ss_pred EEEEECCCCCEEEEeECCCCcEEEEe--CCCCceEEEEEccCCceEEecc-ceeEEEEEec------cC--cceeeeecC
Confidence 55 4557899999999999988887 5778899999999995 55655 5566677665 11 122233455
Q ss_pred ccccceeEEEEecCCCEEEEEecCC----eEEEEecccCCce-eeeeeccCCccceEEEeecCc--eEEEecCCCeEEEe
Q 038568 232 KHRSTVNALALNGDGSLLFSGGCDR----WIVVWERERDHRM-VFAEALWGHTGALLCLINVGD--LLASGSADRTVRIW 304 (357)
Q Consensus 232 ~~~~~v~~~~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw 304 (357)
.|...|.+++|+|+++++++++.|+ .+++|++...... .....+.+|...|.+++|+|+ +||+|+.|++|+||
T Consensus 217 ~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 217 DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 6888999999999999999999887 6888998765432 234566789999999999887 99999999999999
Q ss_pred eCCCCcceeeeee-ecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 305 QRGKENCYRCMAF-LEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 305 ~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++++ +++.. +.+|..+|++++|+||++ +|+|||.|++|||||
T Consensus 297 d~~~~---~~~~~~~~gH~~~V~~v~fSpdg~-------~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 297 KLKDL---SMSKIFKQAHSFAITEVTISPDST-------YVASVSAANTIHIIK 340 (365)
T ss_dssp ETTTT---EEEEEETTSSSSCEEEEEECTTSC-------EEEEEETTSEEEEEE
T ss_pred ECCCC---cEEEEecCcccCCEEEEEECCCCC-------EEEEEeCCCeEEEEE
Confidence 99987 55665 579999999999999999 999999999999996
No 50
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-40 Score=276.36 Aligned_cols=255 Identities=23% Similarity=0.348 Sum_probs=203.1
Q ss_pred CccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 58 DYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 58 ~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
+.+.+..+.+ |.++|.+++|+|+.|++++.|++|++||+..+... ....+.
T Consensus 3 ~~~~~~~~~~---h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~-~~~~~~------------------------- 53 (330)
T 2hes_X 3 SINLIKSLKL---YKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFT-LIDVLD------------------------- 53 (330)
T ss_dssp CCEEEEEEEC---CSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCE-EEEEEC-------------------------
T ss_pred ccccceeecc---CCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeE-EEEEEe-------------------------
Confidence 3456777887 99999999999999999999999999999865321 111110
Q ss_pred cccccccEEEEEEec--CeEEEEecCCeEEEEEcCcc-------hhhhhccccccccEEEEEEecCC-eEEEEeCCCeEE
Q 038568 138 WLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNY-------KCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIR 207 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~ 207 (357)
..+|...|.+++|+| ++|++++.|++|++||++.. +.+..+ .+|...|.+++|+|++ +|++++.|+.|+
T Consensus 54 ~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 54 ETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp TTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 014899999999999 89999999999999998532 344455 7899999999999998 699999999999
Q ss_pred EEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEee
Q 038568 208 VWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLIN 287 (357)
Q Consensus 208 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 287 (357)
+||++ ......+.+..+.+|...|.+++|+|++++|++++.|+.|++||..++. ......+.+|...|.+++|
T Consensus 133 iwd~~------~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 133 IWETD------ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp EEECC------TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEE
T ss_pred EEecc------CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEe
Confidence 99985 2222345667788999999999999999999999999999999987652 2245677899999999999
Q ss_pred cCc----eEEEecCCCeEEEeeCCCCc-----ceeeeeeecC-CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 288 VGD----LLASGSADRTVRIWQRGKEN-----CYRCMAFLEG-HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 288 ~~~----~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+++ +|++|+.|++|++||++.+. ...+...+.+ |...|.+++|++++ +|++++.||.|++||
T Consensus 206 ~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--------~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 206 DKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--------LIASVGADGVLAVYE 277 (330)
T ss_dssp CCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--------CEEEEETTSCEEEEE
T ss_pred cCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--------EEEEEeCCCEEEEEE
Confidence 875 79999999999999997542 1234445554 99999999999664 799999999999996
No 51
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.8e-41 Score=291.75 Aligned_cols=275 Identities=16% Similarity=0.184 Sum_probs=210.0
Q ss_pred CccceeEEEEe---cceEEEeeCC-ceEEEeccCCccccc--eeccccCCCCceEEEEEec-Cc--eEEeecCCeEEEEe
Q 038568 28 HHMIISCLAVH---NSLLYAASLN-EINVFDLISDYSHVD--TFSNDLSSSGSVKSITFHI-TK--IFTAHQDCKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~--~~~~~~~~~~~v~~l~~~~-~~--l~~~~~d~~i~vwd 98 (357)
|...|+||+|+ +++||+|+.| .|+|||+ .+++... .+.+ |.+.|++|+|+| ++ |++++.||+|++||
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~-~~~~~~~~~~~~g---H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNF-GIKDKPTFIKGIG---AGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECS-SCCSCCEEECCCS---SSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEEC-CCCCceeEEEccC---CCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 88999999998 6799999999 9999999 6655433 3445 999999999997 33 99999999999999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhh
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLE 176 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~ 176 (357)
+++.... .+... ..+...+.+++|++ .+|++|+.||.|++||++. +.+.
T Consensus 194 ~~~~~~~-~~~~~---------------------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~ 244 (435)
T 4e54_B 194 FKGNILR-VFASS---------------------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELW 244 (435)
T ss_dssp TTSCEEE-EEECC---------------------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCC
T ss_pred ccCCcee-EEecc---------------------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeE
Confidence 9765322 22111 13455678899999 8999999999999999864 5666
Q ss_pred hccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEec
Q 038568 177 SVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC 254 (357)
Q Consensus 177 ~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 254 (357)
.+ ..|...|.+++|+|++ .+++++.|+.|++||++.. ... .......+|...|++++|+|++++|++++.
T Consensus 245 ~~-~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~------~~~-~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 245 NL-RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV------RGK-ASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp CS-BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC------CSS-SCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred EE-ecccceEEeeeecCCCceEEEEecCcceeeEEecccc------ccc-ceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 77 7899999999999987 4889999999999999832 111 122334578999999999999999999999
Q ss_pred CCeEEEEecccCCceeeeeeccCCcc------ceEEEeecCc--eEEEe------------cCCCeEEEeeCCCCcceee
Q 038568 255 DRWIVVWERERDHRMVFAEALWGHTG------ALLCLINVGD--LLASG------------SADRTVRIWQRGKENCYRC 314 (357)
Q Consensus 255 dg~i~vwd~~~~~~~~~~~~~~~~~~------~v~~~~~~~~--~l~~~------------~~dg~i~vw~~~~~~~~~~ 314 (357)
||.|++||+.++...... ..|.. .+....|+++ +++++ ..++.|++||..++ +.
T Consensus 317 D~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g---~~ 390 (435)
T 4e54_B 317 KSEIRVYSASQWDCPLGL---IPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG---KM 390 (435)
T ss_dssp SSCEEEEESSSSSSEEEE---CCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC---CE
T ss_pred CCEEEEEECCCCccceEE---ecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC---cE
Confidence 999999999987643322 12211 1122233332 33333 34568999999988 44
Q ss_pred eee-ecCCcCceEEE-EEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 315 MAF-LEGHEKPVKSL-VAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 315 ~~~-~~~h~~~v~~~-~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.. ..+|...|.++ +|+|++. +|++|+ |+.|+|||
T Consensus 391 ~~~l~~~~~~~v~s~~~fspdg~-------~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 391 MCQLYDPESSGISSLNEFNPMGD-------TLASAM-GYHILIWS 427 (435)
T ss_dssp EEEECCSSCCCCCCEEEECTTSS-------CEEEEC-SSEEEECC
T ss_pred EEEEeCCCCCcEEEEEEECCCCC-------EEEEEc-CCcEEEEE
Confidence 444 35788889988 6999998 898886 88999997
No 52
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-41 Score=295.99 Aligned_cols=298 Identities=12% Similarity=0.030 Sum_probs=218.6
Q ss_pred cceecccccCCCCCCCccceeEEEEe--c---------ceEEE-------------------eeCC-ceEEEeccCCccc
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVH--N---------SLLYA-------------------ASLN-EINVFDLISDYSH 61 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s--~---------~~l~t-------------------~~~d-~i~iw~~~~~~~~ 61 (357)
..++..++. +.+.|.+|+|+ + ++||+ ++.| +|+||++ ++++.
T Consensus 123 ~~r~~~~~~------~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~-~~~~~ 195 (524)
T 2j04_B 123 GKRRGFIYN------VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKM-NTSTL 195 (524)
T ss_dssp CCSCEEEEE------CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEE-ETTTC
T ss_pred CCcceEEEE------CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEc-cCCCC
Confidence 344445555 67889999998 4 56666 4577 8999999 66554
Q ss_pred c----ceeccccCCCCceEEEEEecC--------ceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEE
Q 038568 62 V----DTFSNDLSSSGSVKSITFHIT--------KIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVT 129 (357)
Q Consensus 62 ~----~~~~~~~~~~~~v~~l~~~~~--------~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (357)
. ..+.. |.+.|.+++|+|+ .|++++.||+|++||+..++........
T Consensus 196 ~~~~~~~l~~---~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~------------------ 254 (524)
T 2j04_B 196 HCVKVQTIVH---SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM------------------ 254 (524)
T ss_dssp CEEEEEEEEE---CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC------------------
T ss_pred CceEEEEEEe---cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee------------------
Confidence 2 33555 7899999999986 2999999999999999866422100000
Q ss_pred EecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchh-hhhccccccccEEEE--EEecCC--eEEEEeCC
Q 038568 130 VRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKC-LESVNKAHEDAVNAV--VVSDNG--VVYTGSAD 203 (357)
Q Consensus 130 ~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~--~~~~~~--~l~~~~~d 203 (357)
.......+.+|...|++++|++ ..|++|+.||+|++||+++++. ...+ ..|...|.++ .++|++ .|++++.|
T Consensus 255 -~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~-~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 255 -CEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYD-QVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp -CCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEE-ECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred -ecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEe-ecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 0000112347889999999998 8999999999999999997744 3345 7899999999 567876 58999999
Q ss_pred CeEEEEEccccccccccccceeeeeEeeccc--cceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccc
Q 038568 204 GRIRVWERSVVDHNKERKSRHMLVTTLVKHR--STVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGA 281 (357)
Q Consensus 204 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 281 (357)
++|++||++ ..+....+.+|. ..|.+++|+|+++.+++++.|++|++||++++... ..+.+|...
T Consensus 333 ~tvklWD~~----------~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~---~~l~gH~~~ 399 (524)
T 2j04_B 333 GYFYIFNPK----------DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV---HPLVSRETT 399 (524)
T ss_dssp SEEEEECGG----------GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC---EEEEECSSC
T ss_pred CeEEEEECC----------CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc---eeeecCCCc
Confidence 999999998 222333344454 35889999999999999999999999999987643 345679999
Q ss_pred eEEEeecCc--eEEEecCCCeEEEeeCCCCc-----------------------------------------ceeeeeee
Q 038568 282 LLCLINVGD--LLASGSADRTVRIWQRGKEN-----------------------------------------CYRCMAFL 318 (357)
Q Consensus 282 v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~-----------------------------------------~~~~~~~~ 318 (357)
|.+++|+|+ +|++|+.||+|++||+.... ....+..+
T Consensus 400 V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l 479 (524)
T 2j04_B 400 ITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKI 479 (524)
T ss_dssp EEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-----------
T ss_pred eEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeee
Confidence 999999987 89999999999999863210 01123445
Q ss_pred cCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 319 EGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 319 ~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+|..+|.+++|+|+++ ....+++|+.||.||||+
T Consensus 480 ~gh~~~V~~Vafsp~~~----~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 480 DAHGINITCTKWNETSA----GGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp --CCCSCCCEEECCSTT----TTTEEEEECTTSEEEEEE
T ss_pred cCCCceEEEEECCCCCC----ccHHHHhhccCceEEEEE
Confidence 67889999999999953 112899999999999995
No 53
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-40 Score=284.73 Aligned_cols=275 Identities=16% Similarity=0.267 Sum_probs=229.7
Q ss_pred CccceeEEEEe--cc-eEEEeeCC-ceEEEec----cCCcc-----ccceecccc-------CCCCceEEEEEecCc--e
Q 038568 28 HHMIISCLAVH--NS-LLYAASLN-EINVFDL----ISDYS-----HVDTFSNDL-------SSSGSVKSITFHITK--I 85 (357)
Q Consensus 28 h~~~i~~~~~s--~~-~l~t~~~d-~i~iw~~----~~~~~-----~~~~~~~~~-------~~~~~v~~l~~~~~~--l 85 (357)
|.+.|++++|+ ++ +||+|+.| .|++|++ ..... ....+.... .|...|++++|+|++ |
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 67999999999 77 99999999 9999998 32221 222232100 157799999999987 9
Q ss_pred EEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCe
Q 038568 86 FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRS 163 (357)
Q Consensus 86 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~ 163 (357)
++++.||.|++|| .+++....+ ..|...|.+++|+| .+|++++.||.
T Consensus 124 ~~~~~dg~i~i~~-~~~~~~~~~------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~ 172 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGALLNVL------------------------------NFHRAPIVSVKWNKDGTHIISMDVENV 172 (425)
T ss_dssp EEEETTSCEEEEE-TTSCEEEEE------------------------------CCCCSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEeCCCeEEEEe-CCCCeeeec------------------------------cCCCccEEEEEECCCCCEEEEEecCCe
Confidence 9999999999999 334333222 27889999999999 78999999999
Q ss_pred EEEEEcCcchhhhhcccccccc---------------EEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeee
Q 038568 164 FKIWNASNYKCLESVNKAHEDA---------------VNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVT 228 (357)
Q Consensus 164 i~iwd~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 228 (357)
|++||+.+++.+..+ ..+... +.++.|+|++.+++++.++.|++||++ ......
T Consensus 173 i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~----------~~~~~~ 241 (425)
T 1r5m_A 173 TILWNVISGTVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQIT----------EKTPTG 241 (425)
T ss_dssp EEEEETTTTEEEEEE-CCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETT----------CSSCSE
T ss_pred EEEEECCCCcEEEEe-eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcC----------CCceee
Confidence 999999998888777 555555 899999999999999999999999998 345566
Q ss_pred EeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCC
Q 038568 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRG 307 (357)
Q Consensus 229 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~ 307 (357)
.+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+.+|...+.++.|+++ ++++++.|+.|++||++
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNS---QNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLK 318 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSC---SEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETT
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCcc---ceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECC
Confidence 6778999999999999999999999999999999998764 3455678999999999887 99999999999999999
Q ss_pred CCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 308 KENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 308 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++ +.+..+..|..+|++++|+|+++ +|++++.||.|++||
T Consensus 319 ~~---~~~~~~~~~~~~i~~~~~s~~~~-------~l~~~~~dg~i~i~~ 358 (425)
T 1r5m_A 319 QN---TLLALSIVDGVPIFAGRISQDGQ-------KYAVAFMDGQVNVYD 358 (425)
T ss_dssp TT---EEEEEEECTTCCEEEEEECTTSS-------EEEEEETTSCEEEEE
T ss_pred CC---cEeEecccCCccEEEEEEcCCCC-------EEEEEECCCeEEEEE
Confidence 87 66777888999999999999998 999999999999996
No 54
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=276.09 Aligned_cols=254 Identities=22% Similarity=0.349 Sum_probs=210.5
Q ss_pred CccccceeccccCCCC-ceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccc
Q 038568 58 DYSHVDTFSNDLSSSG-SVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHK 134 (357)
Q Consensus 58 ~~~~~~~~~~~~~~~~-~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (357)
..+.+.++.+ |.. .|.+++|+|++ |++|+.|++|++||+.+++........
T Consensus 4 ~~~~~~~~~~---h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~----------------------- 57 (345)
T 3fm0_A 4 SLVLLGRVPA---HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS----------------------- 57 (345)
T ss_dssp CEEEEEEECC---STTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC-----------------------
T ss_pred cEEEeeeecC---CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec-----------------------
Confidence 3456677777 887 99999999987 999999999999999876432221111
Q ss_pred ccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcch--hhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEE
Q 038568 135 KRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVW 209 (357)
Q Consensus 135 ~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~ 209 (357)
.+|...|.+++|+| ++|++|+.|+.+++||+.++. ++..+ .+|...|.+++|+|++ +|++++.|+.|++|
T Consensus 58 ----~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 58 ----EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTL-EGHENEVKSVAWAPSGNLLATCSRDKSVWVW 132 (345)
T ss_dssp ----SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ----cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEc-cCCCCCceEEEEeCCCCEEEEEECCCeEEEE
Confidence 28999999999999 899999999999999987653 45666 7899999999999998 69999999999999
Q ss_pred EccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC
Q 038568 210 ERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG 289 (357)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 289 (357)
|++. . ........+..|...|.+++|+|++++|++++.|+.|++||.+++.. .....+.+|...|.+++|++
T Consensus 133 d~~~------~-~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~-~~~~~~~~h~~~v~~l~~sp 204 (345)
T 3fm0_A 133 EVDE------E-DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDW-VCCATLEGHESTVWSLAFDP 204 (345)
T ss_dssp EECT------T-SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECT
T ss_pred ECCC------C-CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCE-EEEEEecCCCCceEEEEECC
Confidence 9872 1 12345667788999999999999999999999999999999986643 24456788999999999987
Q ss_pred c--eEEEecCCCeEEEeeCCCCc------------ceeeeeeecC-CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEE
Q 038568 290 D--LLASGSADRTVRIWQRGKEN------------CYRCMAFLEG-HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIK 354 (357)
Q Consensus 290 ~--~l~~~~~dg~i~vw~~~~~~------------~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~ 354 (357)
+ +|++++.|++|++|+...+. ..+++..+.+ |...|.+++|+|++. .|++++.|+.|+
T Consensus 205 ~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-------~l~s~~~d~~i~ 277 (345)
T 3fm0_A 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-------ALATACGDDAIR 277 (345)
T ss_dssp TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-------CEEEEETTSCEE
T ss_pred CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-------EEEEEeCCCeEE
Confidence 6 99999999999999974321 1234445555 889999999999998 999999999999
Q ss_pred ecC
Q 038568 355 VWD 357 (357)
Q Consensus 355 ~wd 357 (357)
+||
T Consensus 278 vw~ 280 (345)
T 3fm0_A 278 VFQ 280 (345)
T ss_dssp EEE
T ss_pred EEE
Confidence 995
No 55
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8.4e-40 Score=279.31 Aligned_cols=296 Identities=17% Similarity=0.239 Sum_probs=232.0
Q ss_pred ceecccccCCCCCCCccceeEEEEe---cceEEEeeCC-ceEEEeccCCccccceeccc----------cCCCCceEEEE
Q 038568 14 HHCIASLKIPSPDPHHMIISCLAVH---NSLLYAASLN-EINVFDLISDYSHVDTFSND----------LSSSGSVKSIT 79 (357)
Q Consensus 14 ~~~~~~~~~~~g~~h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~----------~~~~~~v~~l~ 79 (357)
.+....+++ |.+.|++++|+ +++|++|+.| .|++||+ .+++....+... ..|...|.+++
T Consensus 33 ~~~~~~~~~-----h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 106 (408)
T 4a11_B 33 NKDRDVERI-----HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDL-ENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQ 106 (408)
T ss_dssp CTTEEECCC-----CSSCEEEEEECTTTCCEEEEEETTSCEEEEEC-CCCSSSSCEEECEEEEECTTCTTCCSSCEEEEE
T ss_pred Ccceeeeec-----cCCcEEEEEEecCCCCEEEEEcCCCeEEEEEC-CCCcccceEeccccccccccccccCCCcEEEEE
Confidence 344455554 99999999997 7899999999 9999999 776666555310 12999999999
Q ss_pred Eec-Cc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----
Q 038568 80 FHI-TK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---- 152 (357)
Q Consensus 80 ~~~-~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---- 152 (357)
|+| +. |++++.||.|++||+.+++....+ .+...+.++.+.+
T Consensus 107 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~ 155 (408)
T 4a11_B 107 WYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF-------------------------------NFEETVYSHHMSPVSTK 155 (408)
T ss_dssp ECTTCTTCEEEEETTSEEEEEETTTTEEEEEE-------------------------------ECSSCEEEEEECSSCSS
T ss_pred EccCCCcEEEEEeCCCeEEEeeCCCCccceec-------------------------------cCCCceeeeEeecCCCC
Confidence 999 44 999999999999999987654433 4567788999988
Q ss_pred -CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccc------cccc
Q 038568 153 -GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKE------RKSR 223 (357)
Q Consensus 153 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~------~~~~ 223 (357)
.++++++.||.|++||+++++.+..+ ..|...|.+++|+|++ .+++++.||.|++||++....... ....
T Consensus 156 ~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 156 HCLVAVGTRGPKVQLCDLKSGSCSHIL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp CCEEEEEESSSSEEEEESSSSCCCEEE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CcEEEEEcCCCeEEEEeCCCcceeeee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 38999999999999999999988888 7899999999999998 388999999999999973221000 0011
Q ss_pred eeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeecc---CCccceEEEeec-CceEEEecCCC
Q 038568 224 HMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW---GHTGALLCLINV-GDLLASGSADR 299 (357)
Q Consensus 224 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~l~~~~~dg 299 (357)
.........|...|.+++|+|++++|++++.||.|++||+++++......... ............ ...+++++.|+
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETT
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCC
Confidence 11122235788999999999999999999999999999999876432221110 011111222222 33777888899
Q ss_pred eEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 300 TVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 300 ~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.|++||+.++ +.+..+.+|...|++++|+|+++ +|++++.||.|++||
T Consensus 315 ~i~v~d~~~~---~~~~~~~~~~~~v~~~~~s~~~~-------~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 315 TIAVYTVYSG---EQITMLKGHYKTVDCCVFQSNFQ-------ELYSGSRDCNILAWV 362 (408)
T ss_dssp EEEEEETTTC---CEEEEECCCSSCEEEEEEETTTT-------EEEEEETTSCEEEEE
T ss_pred EEEEEECcCC---cceeeeccCCCeEEEEEEcCCCC-------EEEEECCCCeEEEEe
Confidence 9999999987 67788899999999999999998 999999999999996
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-40 Score=285.81 Aligned_cols=271 Identities=17% Similarity=0.198 Sum_probs=221.7
Q ss_pred ccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCcc
Q 038568 29 HMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASR 103 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~ 103 (357)
...+++++|+ +++|++++.| .|++||+ .+.+....+.. | ..+....|++++ |++++.||.|++||+.+++
T Consensus 56 ~~~~~~~~~s~~g~~l~~~~~d~~v~i~d~-~~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 56 VDAGKGNTFEKVGSHLYKARLDGHDFLFNT-IIRDGSKMLKR---A-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL 130 (420)
T ss_dssp CBCCTTCEEEEEETTEEEEEETTEEEEEEC-CSEETTTTSCS---C-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE
T ss_pred cccccceeeeecCCeEEEEEcCCcEEEEEe-cccceeeEEec---C-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc
Confidence 3445688999 9999999999 9999999 88787777765 5 445555678776 9999999999999998765
Q ss_pred ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhcccc
Q 038568 104 QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKA 181 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 181 (357)
....+ .+|...|.+++|+| ++|++++.|+.|++||+++++.+..+ ..
T Consensus 131 ~~~~~------------------------------~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~ 179 (420)
T 3vl1_A 131 QREID------------------------------QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IG 179 (420)
T ss_dssp EEEET------------------------------TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-EC
T ss_pred eeeec------------------------------ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cC
Confidence 43222 28999999999999 79999999999999999999998888 78
Q ss_pred ccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeec---c---------------------ccc
Q 038568 182 HEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK---H---------------------RST 236 (357)
Q Consensus 182 ~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~---~---------------------~~~ 236 (357)
|...|.+++|+|++ +|++++.|+.|++||++. .+....+.. + ...
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGT----------GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTT----------TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC----------CceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 99999999999998 699999999999999982 233333332 2 345
Q ss_pred eeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCccee
Q 038568 237 VNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYR 313 (357)
Q Consensus 237 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~ 313 (357)
+.+++|+|++++|++++.||.|++||+++++... .....|...+.+++|+++ +|++|+.||.|++||+++++ .
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~--~ 325 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTI--QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE--C 325 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEE--EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--S
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCceeE--EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc--C
Confidence 5566678899999999999999999999877533 334468889999999887 89999999999999999874 2
Q ss_pred eeeeecC-CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 314 CMAFLEG-HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 314 ~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++..+.+ |..+|+++.+ +++. +|++++.||.|++||
T Consensus 326 ~~~~~~~~~~~~v~~~~~-~~~~-------~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 326 PVGEFLINEGTPINNVYF-AAGA-------LFVSSGFDTSIKLDI 362 (420)
T ss_dssp CSEEEEESTTSCEEEEEE-ETTE-------EEEEETTTEEEEEEE
T ss_pred chhhhhccCCCCceEEEe-CCCC-------EEEEecCCccEEEEe
Confidence 3455555 6778888855 5666 999999999999996
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.2e-40 Score=280.25 Aligned_cols=289 Identities=14% Similarity=0.236 Sum_probs=226.1
Q ss_pred cceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEE
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFT 87 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~ 87 (357)
..+....+.. | ..+....|+ +++|++|+.| .|++||+ .+++....+.+ |...|++++|+|++ |++
T Consensus 87 ~~~~~~~~~~-----~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s 156 (420)
T 3vl1_A 87 IRDGSKMLKR-----A-DYTAVDTAKLQMRRFILGTTEGDIKVLDS-NFNLQREIDQA---HVSEITKLKFFPSGEALIS 156 (420)
T ss_dssp SEETTTTSCS-----C-CEEEEEEECSSSCEEEEEETTSCEEEECT-TSCEEEEETTS---SSSCEEEEEECTTSSEEEE
T ss_pred ccceeeEEec-----C-CceEEEEEecCCCEEEEEECCCCEEEEeC-CCcceeeeccc---ccCccEEEEECCCCCEEEE
Confidence 3444455553 4 444444566 8999999999 9999999 88888888777 99999999999987 999
Q ss_pred eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEE
Q 038568 88 AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFK 165 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~ 165 (357)
++.|+.|++||+.+++....+. +|...|.+++|+| .+|++++.||.|+
T Consensus 157 ~s~d~~i~iwd~~~~~~~~~~~------------------------------~h~~~v~~~~~~~~~~~l~s~~~d~~v~ 206 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPRTLI------------------------------GHRATVTDIAIIDRGRNVLSASLDGTIR 206 (420)
T ss_dssp EETTSEEEEEETTTCCCCEEEE------------------------------CCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred EeCCCeEEEEeCCCCcCceEEc------------------------------CCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 9999999999999876554432 7899999999999 8899999999999
Q ss_pred EEEcCcchhhhhccc--cccccEEEEE---------------------EecCC-eEEEEeCCCeEEEEEccccccccccc
Q 038568 166 IWNASNYKCLESVNK--AHEDAVNAVV---------------------VSDNG-VVYTGSADGRIRVWERSVVDHNKERK 221 (357)
Q Consensus 166 iwd~~~~~~~~~~~~--~~~~~v~~~~---------------------~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 221 (357)
+||+++++.+..+.. .+...+.+++ |+|++ .|++++.||.|++||++
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~--------- 277 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF--------- 277 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT---------
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC---------
Confidence 999999888777621 2444455544 56778 59999999999999998
Q ss_pred cceeeee-EeeccccceeEEEEecCCC-EEEEEecCCeEEEEecccCCceeeeeeccC-CccceEEEeecCc-eEEEecC
Q 038568 222 SRHMLVT-TLVKHRSTVNALALNGDGS-LLFSGGCDRWIVVWERERDHRMVFAEALWG-HTGALLCLINVGD-LLASGSA 297 (357)
Q Consensus 222 ~~~~~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-~l~~~~~ 297 (357)
...... ....|...|.+++|+|+++ +|++|+.||.|++||+++++.. ...+.. |...+.++.+.+. +|++++.
T Consensus 278 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 278 -SKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP--VGEFLINEGTPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp -TCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC--SEEEEESTTSCEEEEEEETTEEEEEETT
T ss_pred -CCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc--hhhhhccCCCCceEEEeCCCCEEEEecC
Confidence 222333 3346888999999999998 9999999999999999987542 233333 6777888877644 9999999
Q ss_pred CCeEEEeeCCCCccee------eeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 298 DRTVRIWQRGKENCYR------CMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 298 dg~i~vw~~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
||.|++|++..+...+ ....+.+|.+.|.+++|+|++. .++ .+++.+.+|.+.+|+
T Consensus 355 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~~g-~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 355 DTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE---SNG-EVLEVGKNNFCALYN 416 (420)
T ss_dssp TEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS---SSC-EEEEEETTTEEEEEE
T ss_pred CccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC---Ccc-eEEEEcCCceEEEEe
Confidence 9999999998743222 2234567889999999999875 112 355666789999995
No 58
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-40 Score=273.75 Aligned_cols=244 Identities=19% Similarity=0.279 Sum_probs=198.1
Q ss_pred CCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
|.+.|++++|+|++ |++|+.|++|++||+.+++.. .+.. +.+|...|.++
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~-~~~~---------------------------l~gH~~~V~~v 63 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI-LIAD---------------------------LRGHEGPVWQV 63 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE-EEEE---------------------------EECCSSCEEEE
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE-EEEE---------------------------EcCCCccEEEE
Confidence 99999999999987 999999999999999876421 1111 23899999999
Q ss_pred EEec----CeEEEEecCCeEEEEEcCcch--hhhhccccccccEEEEEEecC--C-eEEEEeCCCeEEEEEccccccccc
Q 038568 149 VVKQ----GLMYSVSWDRSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDN--G-VVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 149 ~~~~----~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
+|++ ++|++|+.|++|++||+++++ .+..+ ..|...|.+++|+|+ + .|++|+.|+.|++||++.
T Consensus 64 ~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~------ 136 (316)
T 3bg1_A 64 AWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTG------ 136 (316)
T ss_dssp EECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECS------
T ss_pred EeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCC------
Confidence 9974 789999999999999998864 44455 679999999999997 5 599999999999999872
Q ss_pred cccceeeeeEeeccccceeEEEEecC-----------------CCEEEEEecCCeEEEEecccCCceeeeeeccCCccce
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGD-----------------GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL 282 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 282 (357)
.. .......+.+|...|.+++|+|+ +++|++|+.|+.|++||++..........+.+|...|
T Consensus 137 ~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 137 EG-QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV 215 (316)
T ss_dssp SS-CEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE
T ss_pred CC-CcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce
Confidence 11 12233455678899999999997 4789999999999999997654444566788999999
Q ss_pred EEEeecCc------eEEEecCCCeEEEeeCCCCcce-eeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 283 LCLINVGD------LLASGSADRTVRIWQRGKENCY-RCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 283 ~~~~~~~~------~l~~~~~dg~i~vw~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
.+++|+|+ +|++++.|++|++|++++.... .....+..|...|.+++|+|+++ +|++++.||.|++
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-------~las~~~D~~v~l 288 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-------ILAVSGGDNKVTL 288 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-------CEEEEESSSCEEE
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-------EEEEEcCCCeEEE
Confidence 99999874 7999999999999999863111 12234467889999999999998 9999999999999
Q ss_pred cC
Q 038568 356 WD 357 (357)
Q Consensus 356 wd 357 (357)
|+
T Consensus 289 w~ 290 (316)
T 3bg1_A 289 WK 290 (316)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 59
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.4e-39 Score=269.14 Aligned_cols=265 Identities=11% Similarity=0.107 Sum_probs=224.0
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCcc---ccceeccccCCCCceEEEEEecC---ceEEeecCCeEEEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYS---HVDTFSNDLSSSGSVKSITFHIT---KIFTAHQDCKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~l~~~~~---~l~~~~~d~~i~vwd 98 (357)
|.+.|++++|+ +++|++++.| .|++|++ .+++ ....+.. |...|.+++|+|+ .|++++.||.|++||
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~-~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKF-DIQAKNVDLLQSLR---YKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEE-ETTTTEEEEEEEEE---CSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEe-CCCCccccceeeee---cCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 99999999999 8999999999 9999999 6655 2344445 9999999999976 499999999999999
Q ss_pred c-CCccceeeeeecCccccceeeeecCCCeEEEeccccccccc--ccccEEEEEEec-CeEEEEecCCeEEEEEcCc---
Q 038568 99 I-TASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLE--HWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASN--- 171 (357)
Q Consensus 99 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~--- 171 (357)
+ .+++. ..+ .+ |...|.+++|+| +++++++.|+.|++||+++
T Consensus 86 ~~~~~~~-~~~------------------------------~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 86 LIGSPSF-QAL------------------------------TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp SSSSSSE-EEC------------------------------BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTT
T ss_pred eccCCce-Eec------------------------------cccCCCCceEEEEeCCCCEEEEEcCCCeEEEEccccccc
Confidence 9 76643 111 16 899999999998 9999999999999999998
Q ss_pred ------chhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec-
Q 038568 172 ------YKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG- 244 (357)
Q Consensus 172 ------~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 244 (357)
++++..+ .+...+.+++|+|++ +++++.|+.|++||++.. .. .........|...+.+++|+|
T Consensus 135 ~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~-----~~--~~~~~~~~~~~~~i~~i~~~~~ 204 (342)
T 1yfq_A 135 GVIAVKNLNSNNT--KVKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLC-----ED--DNGTIEESGLKYQIRDVALLPK 204 (342)
T ss_dssp BCEEEEESCSSSS--SSCCCEEEEEECSSE-EEEEESTTEEEEEESSCC-----TT--CCCEEEECSCSSCEEEEEECSG
T ss_pred ccccccCCeeeEE--eeCCceEEEEecCCc-EEEEeCCCeEEEEECCcc-----cc--ccceeeecCCCCceeEEEECCC
Confidence 8878877 388999999999987 999999999999999820 11 122334456788999999999
Q ss_pred CCCEEEEEecCCeEEEEecccC------CceeeeeeccCCc---------cceEEEeecCc--eEEEecCCCeEEEeeCC
Q 038568 245 DGSLLFSGGCDRWIVVWERERD------HRMVFAEALWGHT---------GALLCLINVGD--LLASGSADRTVRIWQRG 307 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~~---------~~v~~~~~~~~--~l~~~~~dg~i~vw~~~ 307 (357)
+++++++++.||.|++|+++.. +. ...+..|. ..|.+++|+++ +|++++.||.|++||+.
T Consensus 205 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 205 EQEGYACSSIDGRVAVEFFDDQGDDYNSSK---RFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp GGCEEEEEETTSEEEEEECCTTCCSTTCTT---CEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred CCCEEEEEecCCcEEEEEEcCCCccccccc---ceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 9999999999999999999876 32 33444554 48999999876 89999999999999999
Q ss_pred CCcceeeeeeecCC-cCceEEEEEeeCCCCCCCCeEEEEEcCCCCe
Q 038568 308 KENCYRCMAFLEGH-EKPVKSLVAISSSSSASNGIVSIGSGSLNGE 352 (357)
Q Consensus 308 ~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~ 352 (357)
++ +.+..+.+| ..+|++++ |++. +|++++.||.
T Consensus 282 ~~---~~~~~~~~~h~~~v~~~~--~~~~-------~l~s~s~Dg~ 315 (342)
T 1yfq_A 282 TR---KKIKNFAKFNEDSVVKIA--CSDN-------ILCLATSDDT 315 (342)
T ss_dssp TT---EEEEECCCCSSSEEEEEE--ECSS-------EEEEEEECTH
T ss_pred cH---hHhhhhhcccCCCceEec--CCCC-------eEEEEecCCc
Confidence 87 667788888 99999999 9988 9999999998
No 60
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3.1e-40 Score=278.93 Aligned_cols=252 Identities=22% Similarity=0.342 Sum_probs=211.5
Q ss_pred ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCC
Q 038568 49 EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNN 126 (357)
Q Consensus 49 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (357)
.+..|+. .+....+++.+ |.+.|++++|+|++ |++|+.|++|++||+.+++....+.
T Consensus 47 ~~~~~~~-~~~~~~~~l~g---H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~----------------- 105 (380)
T 3iz6_a 47 TAVSFNP-TDLVCCRTLQG---HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK----------------- 105 (380)
T ss_dssp GCCCCCC-CCCEEEEEECC---CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-----------------
T ss_pred ccccccc-ceeEEeecccc---cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe-----------------
Confidence 6677888 77788888998 99999999999987 9999999999999998876544332
Q ss_pred eEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcch-------hhhhccccccccEEEEEEecCC--
Q 038568 127 YVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYK-------CLESVNKAHEDAVNAVVVSDNG-- 195 (357)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-- 195 (357)
.|...|.+++|+| ++|++|+.|+.+++||+.+.. ....+ .+|...+.++.|.|++
T Consensus 106 -------------~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~-~gh~~~v~~~~~~~~~~~ 171 (380)
T 3iz6_a 106 -------------LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVL-TGHKGYASSCQYVPDQET 171 (380)
T ss_dssp -------------CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBC-CCCSSCCCCCBCCSSSSS
T ss_pred -------------cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeec-cCCCcceEEEEEecCCCC
Confidence 7888999999999 899999999999999987532 23334 7899999999999975
Q ss_pred eEEEEeCCCeEEEEEccccccccccccceeeeeEe-----eccccceeEEEEec-CCCEEEEEecCCeEEEEecccCCce
Q 038568 196 VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL-----VKHRSTVNALALNG-DGSLLFSGGCDRWIVVWERERDHRM 269 (357)
Q Consensus 196 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~ 269 (357)
+|++|+.|+.|++||++ ....+..+ .+|...|.+++|++ ++++|++|+.|+.|++||++....
T Consensus 172 ~l~s~s~D~~i~~wd~~----------~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~- 240 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVT----------TGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR- 240 (380)
T ss_dssp CEEEECTTSCEEEECTT----------TCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC-
T ss_pred EEEEECCCCcEEEEEcC----------CCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc-
Confidence 59999999999999998 22333333 57889999999987 889999999999999999985432
Q ss_pred eeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCC-------cCceEEEEEeeCCCCCCCC
Q 038568 270 VFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGH-------EKPVKSLVAISSSSSASNG 340 (357)
Q Consensus 270 ~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~~ 340 (357)
....+.+|...|.+++|+|+ +|++|+.||+|++||++++ +.+..+..+ ...|++++|+|+++
T Consensus 241 -~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~----- 311 (380)
T 3iz6_a 241 -AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG---HQLQVYNREPDRNDNELPIVTSVAFSISGR----- 311 (380)
T ss_dssp -CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT---EEEEEECCCCSSSCCSSCSCSEEEECSSSS-----
T ss_pred -ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC---cEEEEecccccccccccCceEEEEECCCCC-----
Confidence 44567789999999999876 9999999999999999987 344444332 23589999999999
Q ss_pred eEEEEEcCCCCeEEecC
Q 038568 341 IVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 341 ~~~l~s~~~dg~v~~wd 357 (357)
+|++|+.||.|++||
T Consensus 312 --~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 312 --LLFAGYSNGDCYVWD 326 (380)
T ss_dssp --EEEEECTTSCEEEEE
T ss_pred --EEEEEECCCCEEEEE
Confidence 999999999999997
No 61
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.6e-40 Score=270.35 Aligned_cols=254 Identities=15% Similarity=0.211 Sum_probs=199.4
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCcc--ccceeccccCCCCceEEEEEecC--c--eEEeecCCeEEEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYS--HVDTFSNDLSSSGSVKSITFHIT--K--IFTAHQDCKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~--~--l~~~~~d~~i~vwd 98 (357)
|.+.|++++|+ |++||+|+.| +|+|||+ .+++ .+..+.+ |.++|.+++|+++ + |++++.|++|++||
T Consensus 12 H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~-~~~~~~~~~~l~g---H~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCSSDRSVKIFDV-RNGGQILIADLRG---HEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEETTTEEEEEEE-ETTEEEEEEEEEC---CSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEe-cCCCcEEEEEEcC---CCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 99999999999 9999999999 9999999 6543 4667887 9999999999752 2 99999999999999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEEEEcCcchh
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKC 174 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~ 174 (357)
+++++.... ..+ .+|...|.+++|+| .+|++|+.|+.|++||++.+..
T Consensus 88 ~~~~~~~~~-~~~---------------------------~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~ 139 (316)
T 3bg1_A 88 EENGTWEKS-HEH---------------------------AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ 139 (316)
T ss_dssp CSSSCCCEE-EEE---------------------------CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC
T ss_pred CCCCcceEE-EEc---------------------------cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC
Confidence 987642211 111 27899999999998 4899999999999999987532
Q ss_pred ---hhhccccccccEEEEEEecC------------------CeEEEEeCCCeEEEEEccccccccccccceeeeeEeecc
Q 038568 175 ---LESVNKAHEDAVNAVVVSDN------------------GVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKH 233 (357)
Q Consensus 175 ---~~~~~~~~~~~v~~~~~~~~------------------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 233 (357)
...+ ..|...+.+++|+|+ .+|++|+.|+.|++||++. . ........+.+|
T Consensus 140 ~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~------~-~~~~~~~~l~~h 211 (316)
T 3bg1_A 140 WEVKKIN-NAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE------D-GQWKEEQKLEAH 211 (316)
T ss_dssp EEECCBT-TSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECT------T-SCEEEEECCBCC
T ss_pred cceeeee-ccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCC------C-CccceeeecccC
Confidence 3334 678889999999987 2699999999999999861 1 112456677899
Q ss_pred ccceeEEEEecCC----CEEEEEecCCeEEEEecccCCc-eeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeC
Q 038568 234 RSTVNALALNGDG----SLLFSGGCDRWIVVWERERDHR-MVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQR 306 (357)
Q Consensus 234 ~~~v~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~ 306 (357)
...|.+++|+|++ ++|++++.|++|++||+++... ......+..|...|.+++|+|+ +|++++.|+.|++|+.
T Consensus 212 ~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 212 SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 9999999999986 7999999999999999986321 0112233468889999999876 9999999999999998
Q ss_pred CCCcceeeeeeecCC
Q 038568 307 GKENCYRCMAFLEGH 321 (357)
Q Consensus 307 ~~~~~~~~~~~~~~h 321 (357)
.....+.++..+...
T Consensus 292 ~~~g~~~~~~~~~~~ 306 (316)
T 3bg1_A 292 SVDGQWVCISDVNKG 306 (316)
T ss_dssp CTTSCEEEEEECC--
T ss_pred CCCCcEEEeeeccCC
Confidence 754334555544433
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.7e-39 Score=268.25 Aligned_cols=274 Identities=18% Similarity=0.259 Sum_probs=227.8
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~ 102 (357)
|.++|.+++|+ |++++++..+ .+.+|......+.+..+ + |...|++++|+|++ |++++ ||.|++||+.++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-N---HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEE-C---CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTST
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceec-c---CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCC
Confidence 67899999999 8999988877 77777762333333333 4 99999999999987 77777 999999999877
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcch--hhhhc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYK--CLESV 178 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~--~~~~~ 178 (357)
+....+..+. ...|...|.+++|+| +++++++.||.|++||+++++ ....+
T Consensus 83 ~~~~~~~~~~-------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 137 (337)
T 1gxr_A 83 GNKSPVSQLD-------------------------CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137 (337)
T ss_dssp TCCSCSEEEE-------------------------CSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEE
T ss_pred Cceeeeeccc-------------------------ccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeec
Confidence 6443332211 016788999999999 789999999999999999877 44445
Q ss_pred cccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCe
Q 038568 179 NKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257 (357)
Q Consensus 179 ~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 257 (357)
..|...+.+++|+|++ .+++++.|+.|++||++ ..+....+..|...+.+++|+|++++|++++.||.
T Consensus 138 -~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 138 -TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH----------NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp -ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT----------TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred -ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC----------CCceeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence 6788899999999998 69999999999999998 44566777889999999999999999999999999
Q ss_pred EEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 258 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
|++||+++++..... .+...+.+++|+++ +|++++.|+.|++||+++++ ...+..|..+|++++|+|+++
T Consensus 207 i~~~d~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~ 278 (337)
T 1gxr_A 207 VRSWDLREGRQLQQH----DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLHLHESCVLSLKFAYCGK 278 (337)
T ss_dssp EEEEETTTTEEEEEE----ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC----EEEECCCSSCEEEEEECTTSS
T ss_pred EEEEECCCCceEeee----cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC----eEEEcCCccceeEEEECCCCC
Confidence 999999987644332 36778899998876 99999999999999999863 345678999999999999998
Q ss_pred CCCCCeEEEEEcCCCCeEEecC
Q 038568 336 SASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 336 ~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|++++.||.|++||
T Consensus 279 -------~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 279 -------WFVSTGKDNLLNAWR 293 (337)
T ss_dssp -------EEEEEETTSEEEEEE
T ss_pred -------EEEEecCCCcEEEEE
Confidence 999999999999996
No 63
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.8e-39 Score=265.17 Aligned_cols=242 Identities=22% Similarity=0.400 Sum_probs=204.8
Q ss_pred ccccceeccccCCCCceEEEEEecCc---eEEeecCCeEEEEecCCcccee--eeeecCccccceeeeecCCCeEEEecc
Q 038568 59 YSHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQ--LVSTLPTVKDRLIRSVLPNNYVTVRRH 133 (357)
Q Consensus 59 ~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (357)
.....++.+ |.+.|++++|+|+. |++|+.|++|++|++....... .+
T Consensus 7 ~~l~~~l~g---H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~------------------------- 58 (319)
T 3frx_A 7 LVLRGTLEG---HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPV------------------------- 58 (319)
T ss_dssp EEEEEEECC---CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEE-------------------------
T ss_pred EEEEEEEcc---ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccc-------------------------
Confidence 344567777 99999999999853 9999999999999987543211 11
Q ss_pred cccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEE
Q 038568 134 KKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWE 210 (357)
Q Consensus 134 ~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d 210 (357)
..+.+|...|.+++|++ .+|++++.|++|++||+++++.+..+ .+|...|.+++|+|++ .|++++.|+.|++||
T Consensus 59 --~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 59 --RSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp --EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred --eEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 12338999999999999 89999999999999999999998888 8999999999999998 699999999999999
Q ss_pred ccccccccccccceeeeeEeeccccceeEEEEecC------CCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEE
Q 038568 211 RSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD------GSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC 284 (357)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 284 (357)
++ ...+..+.+|...|.++.|.|. +..+++++.|+.|++||+++.+ ....+.+|...|.+
T Consensus 136 ~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~h~~~v~~ 201 (319)
T 3frx_A 136 IK-----------GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ---IEADFIGHNSNINT 201 (319)
T ss_dssp TT-----------SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE---EEEEECCCCSCEEE
T ss_pred CC-----------CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch---hheeecCCCCcEEE
Confidence 86 3456677889999999999984 4489999999999999998765 44567789999999
Q ss_pred EeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 285 LINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 285 ~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++|+|+ +|++++.||.|++||+.++ +.+..+.. ..+|.+++|+|++. +|++++.+ .+++|+
T Consensus 202 ~~~sp~g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~-~~~v~~~~~sp~~~-------~la~~~~~-~i~v~~ 264 (319)
T 3frx_A 202 LTASPDGTLIASAGKDGEIMLWNLAAK---KAMYTLSA-QDEVFSLAFSPNRY-------WLAAATAT-GIKVFS 264 (319)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTT---EEEEEEEC-CSCEEEEEECSSSS-------EEEEEETT-EEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEecC-CCcEEEEEEcCCCC-------EEEEEcCC-CcEEEE
Confidence 999877 9999999999999999987 55566654 46899999999998 88887754 588884
No 64
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.2e-38 Score=266.46 Aligned_cols=241 Identities=22% Similarity=0.300 Sum_probs=205.6
Q ss_pred cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 60 SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 60 ~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
+...++.+ |...|++++|+|++ |++|+.||+|++||..+++....+.
T Consensus 55 ~~~~~l~g---H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~---------------------------- 103 (354)
T 2pbi_B 55 KTRRTLKG---HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT---------------------------- 103 (354)
T ss_dssp CEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----------------------------
T ss_pred EEEEEecC---CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe----------------------------
Confidence 44567777 99999999999987 9999999999999998776544332
Q ss_pred cccccccEEEEEEec--CeEEEEecCCeEEEEEcCcc------hhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEE
Q 038568 138 WLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNY------KCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRV 208 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i 208 (357)
.|...|.+++|+| .++++++.|+.+++|++... .....+ ..|...|.+++|+|++ .|++++.|++|++
T Consensus 104 --~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~l 180 (354)
T 2pbi_B 104 --MPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCAL 180 (354)
T ss_dssp --CSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred --cCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 6678899999999 89999999999999998653 223334 6789999999999998 6999999999999
Q ss_pred EEccccccccccccceeeeeEeeccccceeEEEEec--CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEe
Q 038568 209 WERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG--DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI 286 (357)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 286 (357)
||++ ..+.+..+.+|...|.+++|+| ++++|++|+.||.|++||+++++ ....+.+|...|.+++
T Consensus 181 wd~~----------~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~ 247 (354)
T 2pbi_B 181 WDVE----------SGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ---CVQAFETHESDVNSVR 247 (354)
T ss_dssp EETT----------TCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEE
T ss_pred EeCC----------CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc---EEEEecCCCCCeEEEE
Confidence 9998 4567778889999999999988 56899999999999999999887 4456678999999999
Q ss_pred ecCc--eEEEecCCCeEEEeeCCCCcceeeeeeec--CCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 287 NVGD--LLASGSADRTVRIWQRGKENCYRCMAFLE--GHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 287 ~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|+|+ +|++|+.|++|++||++++ +.+..+. .+...+++++|+|++. +|++|+.|+.|++||
T Consensus 248 ~~p~~~~l~s~s~D~~v~lwd~~~~---~~~~~~~~~~~~~~~~~~~~s~~g~-------~l~~g~~d~~i~vwd 312 (354)
T 2pbi_B 248 YYPSGDAFASGSDDATCRLYDLRAD---REVAIYSKESIIFGASSVDFSLSGR-------LLFAGYNDYTINVWD 312 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCTTCCSCEEEEEECTTSS-------EEEEEETTSCEEEEE
T ss_pred EeCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCCCcccceeEEEEeCCCC-------EEEEEECCCcEEEEE
Confidence 9876 9999999999999999986 3333333 3345789999999998 999999999999997
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=269.35 Aligned_cols=284 Identities=14% Similarity=0.185 Sum_probs=226.4
Q ss_pred ccceecccccCCCCCCCccceeEEEEe-c----ceEEEeeCC-ceEEEeccCC-cccc-ceeccccCCCCceEEEEEecC
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH-N----SLLYAASLN-EINVFDLISD-YSHV-DTFSNDLSSSGSVKSITFHIT 83 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s-~----~~l~t~~~d-~i~iw~~~~~-~~~~-~~~~~~~~~~~~v~~l~~~~~ 83 (357)
.+.+.++.+++ |.+.|++++|+ . ++|++|+.| .|++||+ ++ +..+ ..+.+ |...|++++|+|+
T Consensus 27 ~~~~~~~~~~~-----h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~-~~~~~~~~~~~~~---h~~~v~~~~~~~~ 97 (368)
T 3mmy_A 27 NPMKDIEVTSS-----PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEV-QDSGQTIPKAQQM---HTGPVLDVCWSDD 97 (368)
T ss_dssp CTTCCEECSSC-----CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEE-CTTSCEEEEEEEE---CSSCEEEEEECTT
T ss_pred CCcceeEeccC-----CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEc-CCCCceeEEEecc---ccCCEEEEEECcC
Confidence 34455555554 99999999999 3 899999999 9999999 65 4444 67777 9999999999998
Q ss_pred c--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE--ec--CeEEE
Q 038568 84 K--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV--KQ--GLMYS 157 (357)
Q Consensus 84 ~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~--~~l~~ 157 (357)
+ |++++.||.|++||+.+++..... .|...|.+++| ++ .+|++
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~~~-------------------------------~~~~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQIA-------------------------------QHDAPVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEE-------------------------------ECSSCEEEEEEEECSSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCceeec-------------------------------cccCceEEEEEEeCCCCCEEEE
Confidence 6 999999999999999987644321 78899999999 66 67999
Q ss_pred EecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccce
Q 038568 158 VSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV 237 (357)
Q Consensus 158 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (357)
++.||.|++||+++++.+..+ . ....+.++.+.++ .+++++.++.+++|+++ .... ........+...+
T Consensus 147 ~~~dg~i~vwd~~~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~------~~~~--~~~~~~~~~~~~~ 215 (368)
T 3mmy_A 147 GSWDKTLKFWDTRSSNPMMVL-Q-LPERCYCADVIYP-MAVVATAERGLIVYQLE------NQPS--EFRRIESPLKHQH 215 (368)
T ss_dssp EETTSEEEEECSSCSSCSEEE-E-CSSCEEEEEEETT-EEEEEEGGGCEEEEECS------SSCE--EEEECCCSCSSCE
T ss_pred ccCCCcEEEEECCCCcEEEEE-e-cCCCceEEEecCC-eeEEEeCCCcEEEEEec------cccc--hhhhccccccCCC
Confidence 999999999999999988887 3 3346777777654 67888899999999997 2111 1111222334556
Q ss_pred eEEEEecCCCE----EEEEecCCeEEEEecccCCceeeeeeccCCcc------------ceEEEeecCc--eEEEecCCC
Q 038568 238 NALALNGDGSL----LFSGGCDRWIVVWERERDHRMVFAEALWGHTG------------ALLCLINVGD--LLASGSADR 299 (357)
Q Consensus 238 ~~~~~~~~~~~----l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~--~l~~~~~dg 299 (357)
.++.+.++... +++++.||.|++||++..........+.+|.. .|.+++|+++ +|++++.||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg 295 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG 295 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC
Confidence 66666665544 99999999999999997754334445556665 7999999877 999999999
Q ss_pred eEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 300 TVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 300 ~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
.|++||++++ +++..+.+|..+|++++|+|+++ +|++++.|+..+.|
T Consensus 296 ~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~g~-------~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 296 RFSFWDKDAR---TKLKTSEQLDQPISACCFNHNGN-------IFAYASSYDWSKGH 342 (368)
T ss_dssp CEEEEETTTT---EEEEECCCCSSCEEEEEECTTSS-------CEEEEECCCSTTCG
T ss_pred eEEEEECCCC---cEEEEecCCCCCceEEEECCCCC-------eEEEEecccccccc
Confidence 9999999987 67788889999999999999998 99999988865544
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.6e-38 Score=272.60 Aligned_cols=303 Identities=17% Similarity=0.251 Sum_probs=236.6
Q ss_pred cccceecccccCCCCCCCccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEec--Cc--
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHI--TK-- 84 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-- 84 (357)
..+.+++..+.+ |.+.|++++|+ +.+|++|+.| .|++||+ ++++.+..+.+ |...|.+++|++ ++
T Consensus 149 ~~~~~~~~~~~~-----h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~-~~~~~~~~~~~---h~~~v~~l~~~~~~~~~~ 219 (464)
T 3v7d_B 149 SINKKFLLQLSG-----HDGGVWALKYAHGGILVSGSTDRTVRVWDI-KKGCCTHVFEG---HNSTVRCLDIVEYKNIKY 219 (464)
T ss_dssp TTTTEEEEEECC-----CSSCEEEEEECSTTEEEEEETTSCEEEEET-TTTEEEEEECC---CSSCEEEEEEEESSSCEE
T ss_pred CCCCcEEEEEeC-----CCcCEEEEEEcCCCEEEEEeCCCCEEEEEC-CCCcEEEEECC---CCCccEEEEEecCCCCCE
Confidence 345667777776 99999999999 6699999999 9999999 88899999988 999999999994 43
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeE
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSF 164 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 164 (357)
+++++.|++|++||+.++.............. .......+. .....+.+|...+.++....+++++++.||.|
T Consensus 220 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i 292 (464)
T 3v7d_B 220 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL--VFHTPEENP-----YFVGVLRGHMASVRTVSGHGNIVVSGSYDNTL 292 (464)
T ss_dssp EEEEETTSCEEEEECCCCCCC------CCSSE--EESCGGGCT-----TEEEEECCCSSCEEEEEEETTEEEEEETTSCE
T ss_pred EEEEcCCCcEEEeeCCCCcccccccccCCcce--EeeccCCCe-----EEEEEccCccceEEEEcCCCCEEEEEeCCCeE
Confidence 99999999999999987754332221111000 000000000 00123458889999998777999999999999
Q ss_pred EEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEe
Q 038568 165 KIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALN 243 (357)
Q Consensus 165 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 243 (357)
++||+++++++..+ ..|...|.+++|+|++ .+++|+.||.|++||++ ..+.+..+.+|...|.+++|+
T Consensus 293 ~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~----------~~~~~~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 293 IVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE----------NGELMYTLQGHTALVGLLRLS 361 (464)
T ss_dssp EEEETTTTEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT----------TTEEEEEECCCSSCEEEEEEC
T ss_pred EEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC----------CCcEEEEEeCCCCcEEEEEEc
Confidence 99999999999888 7899999999999998 69999999999999998 456778888999999999997
Q ss_pred cCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeee-ecCCc
Q 038568 244 GDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAF-LEGHE 322 (357)
Q Consensus 244 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~h~ 322 (357)
+++|++++.||.|++||+++....... ...+...+.++..++.++++|+ ||.|++||++++ +.+.. +..|.
T Consensus 362 --~~~l~s~s~dg~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g---~~~~~~~~~~~ 433 (464)
T 3v7d_B 362 --DKFLVSAAADGSIRGWDANDYSRKFSY--HHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG---KLVHANILKDA 433 (464)
T ss_dssp --SSEEEEEETTSEEEEEETTTCCEEEEE--ECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC---CEEESCTTTTC
T ss_pred --CCEEEEEeCCCcEEEEECCCCceeeee--cCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC---cEEehhhccCC
Confidence 579999999999999999987643222 2233444556666667888888 899999999998 44443 67789
Q ss_pred CceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 323 KPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 323 ~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
..|.+++|+++ . ++++++.||.+.+|
T Consensus 434 ~~v~~v~~~~~-~-------l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 434 DQIWSVNFKGK-T-------LVAAVEKDGQSFLE 459 (464)
T ss_dssp SEEEEEEEETT-E-------EEEEEEETTEEEEE
T ss_pred CcEEEEEecCC-E-------EEEEEEeCCeEEEE
Confidence 99999999733 2 67777788876654
No 67
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-38 Score=261.31 Aligned_cols=242 Identities=22% Similarity=0.407 Sum_probs=205.8
Q ss_pred cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 60 SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 60 ~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
....++.+ |...|++++|+|++ |++++.||.|++|++.+++....+
T Consensus 14 ~~~~~~~g---h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~----------------------------- 61 (312)
T 4ery_A 14 ALKFTLAG---HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI----------------------------- 61 (312)
T ss_dssp EEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE-----------------------------
T ss_pred eeEEEEcc---cCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhh-----------------------------
Confidence 44556676 99999999999987 999999999999999877654333
Q ss_pred cccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccc
Q 038568 138 WLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVV 214 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 214 (357)
.+|...|.+++|+| ++|++++.|+.|++||+++++++..+ ..|...|.++.|+|++ +|++++.|+.|++||++
T Consensus 62 -~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~-- 137 (312)
T 4ery_A 62 -SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK-- 137 (312)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT--
T ss_pred -ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC--
Confidence 27889999999999 89999999999999999999988888 7899999999999998 69999999999999998
Q ss_pred ccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eE
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LL 292 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l 292 (357)
..+....+..|..+|.+++|+|++++|++++.||.|++||+++++.... ....+...+.+++|+++ +|
T Consensus 138 --------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 138 --------TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT--LIDDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp --------TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCSSCCCEEEEEECTTSSEE
T ss_pred --------CCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeE--EeccCCCceEEEEECCCCCEE
Confidence 4456677888999999999999999999999999999999998764332 23356677888888776 99
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEE--EEe-eCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSL--VAI-SSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~--~~~-~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++++.||.|++||++++ +.+..+.+|...+..+ .++ +++. +|++|+.||.|++||
T Consensus 208 ~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------~l~sg~~dg~i~vwd 265 (312)
T 4ery_A 208 LAATLDNTLKLWDYSKG---KCLKTYTGHKNEKYCIFANFSVTGGK-------WIVSGSEDNLVYIWN 265 (312)
T ss_dssp EEEETTTEEEEEETTTT---EEEEEECSSCCSSSCCCEEEECSSSC-------EEEECCTTSCEEEEE
T ss_pred EEEcCCCeEEEEECCCC---cEEEEEEecCCceEEEEEEEEeCCCc-------EEEEECCCCEEEEEE
Confidence 99999999999999987 6677777777654332 344 5565 999999999999997
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.3e-39 Score=297.21 Aligned_cols=280 Identities=17% Similarity=0.259 Sum_probs=237.6
Q ss_pred eecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH 89 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~ 89 (357)
+..+.+++ |.+.|++++|+ +++||+|+.| .|+|||+ .+++.+..+.+ |..+|.+++|+|++ |++++
T Consensus 4 ~~~~~~~~-----h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~-~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~ 74 (814)
T 3mkq_A 4 DIKKTFSN-----RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNY-ETQVEVRSIQV---TETPVRAGKFIARKNWIIVGS 74 (814)
T ss_dssp CCEEEEEE-----ECSCEEEEEECSSSSEEEEEETTSEEEEEET-TTTEEEEEEEC---CSSCEEEEEEEGGGTEEEEEE
T ss_pred ccceeeec-----CCCceEEEEECCCCCEEEEEeCCCEEEEEEC-CCCceEEEEec---CCCcEEEEEEeCCCCEEEEEe
Confidence 34556665 99999999999 9999999999 9999999 88899999998 99999999999987 99999
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEE
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIW 167 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iw 167 (357)
.||.|++||+.+++....+. +|...|.+++|+| .+|++++.||.|++|
T Consensus 75 ~dg~i~vw~~~~~~~~~~~~------------------------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 124 (814)
T 3mkq_A 75 DDFRIRVFNYNTGEKVVDFE------------------------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124 (814)
T ss_dssp TTSEEEEEETTTCCEEEEEE------------------------------CCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEe------------------------------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEE
Confidence 99999999999887554442 7889999999999 789999999999999
Q ss_pred EcCcc-hhhhhccccccccEEEEEEec-CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeec-cccceeEEEEe
Q 038568 168 NASNY-KCLESVNKAHEDAVNAVVVSD-NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALN 243 (357)
Q Consensus 168 d~~~~-~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~ 243 (357)
|+.++ .....+ ..|...|.+++|+| ++ .+++++.||.|++||++ .......+.. +...+.+++|+
T Consensus 125 ~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~----------~~~~~~~~~~~~~~~v~~~~~~ 193 (814)
T 3mkq_A 125 NWENNWALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLG----------QSTPNFTLTTGQERGVNYVDYY 193 (814)
T ss_dssp EGGGTSEEEEEE-ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETT----------CSSCSEEEECCCTTCCCEEEEC
T ss_pred ECCCCceEEEEE-cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECC----------CCcceeEEecCCCCCEEEEEEE
Confidence 99887 445555 78999999999999 66 69999999999999987 2223333443 44889999999
Q ss_pred c--CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeec
Q 038568 244 G--DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLE 319 (357)
Q Consensus 244 ~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 319 (357)
| ++.+|++++.||.|++||+++++ ....+.+|...+.+++|+++ +|++++.||.|++||+.++ +.+..+.
T Consensus 194 ~~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~ 267 (814)
T 3mkq_A 194 PLPDKPYMITASDDLTIKIWDYQTKS---CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY---KVEKTLN 267 (814)
T ss_dssp CSTTCCEEEEECTTSEEEEEETTTTE---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---SEEEEEC
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEee
Confidence 9 99999999999999999998876 44556679999999999887 8999999999999999987 6677888
Q ss_pred CCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 320 GHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 320 ~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
.|...|.+++|+|++. ..+++++.|+.+.+|
T Consensus 268 ~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~ 298 (814)
T 3mkq_A 268 VGLERSWCIATHPTGR------KNYIASGFDNGFTVL 298 (814)
T ss_dssp CSSSSEEEEEECTTCG------GGEEEEEETTEEEEE
T ss_pred cCCCcEEEEEEccCCC------ceEEEEEeCCCEEEE
Confidence 8999999999999975 133444446666665
No 69
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2e-38 Score=306.00 Aligned_cols=282 Identities=17% Similarity=0.246 Sum_probs=239.1
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~ 102 (357)
|.+.|++++|+ +++||+|+.| .|++||+ .+++.+..+.+ |...|.+++|+|++ |++++.|++|++||+.++
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~-~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~ 689 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKA-ETGEKLLDIKA---HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG 689 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEET-TTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEEC-CCCCEEEEecc---CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC
Confidence 99999999999 9999999999 9999999 89999999998 99999999999987 999999999999999988
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEEEEcCcchhhhhc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKCLESV 178 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~ 178 (357)
+....+. +|...|.+++|++ .++++++.||.|++||+++++++..+
T Consensus 690 ~~~~~~~------------------------------~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 690 KLVHTYD------------------------------EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp CEEEEEE------------------------------CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred ceEEEEc------------------------------CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 6554433 7889999999998 47999999999999999999998888
Q ss_pred cccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccce---eeeeEeeccccceeEEEEecCCCEEEEEec
Q 038568 179 NKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRH---MLVTTLVKHRSTVNALALNGDGSLLFSGGC 254 (357)
Q Consensus 179 ~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 254 (357)
..|...|.+++|+|++ .+++++.||.|++||++............ ............+.+++|+|+++.+++++
T Consensus 740 -~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~- 817 (1249)
T 3sfz_A 740 -FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA- 817 (1249)
T ss_dssp -CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-
T ss_pred -cCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-
Confidence 7899999999999998 69999999999999998321110000000 00001112334788999999999999887
Q ss_pred CCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEee
Q 038568 255 DRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAIS 332 (357)
Q Consensus 255 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 332 (357)
++.+.+||+.++..... ...+|...+.+++|+++ ++++++.||.|++||+.++ ..+..+.+|...|++++|+|
T Consensus 818 ~~~v~~~d~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~---~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 818 KNKVLLFDIHTSGLLAE--IHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---LKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp TTEEEEEETTTCCEEEE--EECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTT---EEEEEECCCSSCEEEEEECT
T ss_pred CCcEEEEEecCCCceeE--EcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---ceeeecCCCccceEEEEECC
Confidence 68899999998875433 33478899999999876 9999999999999999987 67788899999999999999
Q ss_pred CCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 333 SSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 333 ~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+++ +|++++.||.|++||
T Consensus 893 dg~-------~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 893 DGS-------SFLTASDDQTIRVWE 910 (1249)
T ss_dssp TSS-------EEEEEETTSCEEEEE
T ss_pred CCC-------EEEEEeCCCeEEEEE
Confidence 998 999999999999996
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=275.07 Aligned_cols=304 Identities=14% Similarity=0.208 Sum_probs=216.2
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCcc-----------ccceeccccCCC------------CceEEEEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYS-----------HVDTFSNDLSSS------------GSVKSITFH 81 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~-----------~~~~~~~~~~~~------------~~v~~l~~~ 81 (357)
|.+.|++++|+ |++||+|+.| .|+|||+ .+++ ....+.+ |. ..|++++|+
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~-~~~~~~~~~~~~~~~~~~~~~~---h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQ-EQENKIQSHSRGEYNVYSTFQS---HEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEE-CC-----CCCCCCEEEEEEEEC---CCCEEEGGGTEEECCCCCEEEEC
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEe-cCCCCCCcccccceeEeccccc---ccccccccccccccCceEEEEEc
Confidence 78999999999 8999999999 9999999 6655 4667777 88 889999999
Q ss_pred cCc----eEEeecCCeEEEEecCCccceeeeeecCccccce----------eeeecCCCeEEEecccc-cccccccccEE
Q 038568 82 ITK----IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRL----------IRSVLPNNYVTVRRHKK-RLWLEHWDAVS 146 (357)
Q Consensus 82 ~~~----l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ 146 (357)
|++ |++++.|++|++||+.+++............... .....+.. ........ ....+|...|.
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD-LMVEASPRRIFANAHTYHIN 181 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE-EEEEEEEEEEECSCCSSCCC
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh-eeeeccceEEeccCCCcceE
Confidence 974 9999999999999998754321111111100000 00000000 11111111 22358999999
Q ss_pred EEEEec--CeEEEEecCCeEEEEEcCc-chhhh-------hccccccccEEEEEEecCC--eEEEEeCCCeEEEEEcccc
Q 038568 147 DLVVKQ--GLMYSVSWDRSFKIWNASN-YKCLE-------SVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVV 214 (357)
Q Consensus 147 ~~~~~~--~~l~~~~~dg~i~iwd~~~-~~~~~-------~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~ 214 (357)
+++|+| ++|++| .|+.|++||+++ ++.+. .+ ..|...|.+++|+|++ .|++++.||.|++||++..
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANM-EELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSG-GGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccc-cccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 999999 788888 899999999984 44433 23 6789999999999987 5999999999999999822
Q ss_pred ccccccccceeeeeEeecccc------------ceeEEEEecCCCEEEEEecCCeEEEEeccc-CCceeeeeeccCCccc
Q 038568 215 DHNKERKSRHMLVTTLVKHRS------------TVNALALNGDGSLLFSGGCDRWIVVWERER-DHRMVFAEALWGHTGA 281 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~ 281 (357)
.........+..|.. .|.+++|+|++++|++++. +.|++||+++ ++ ....+.+|...
T Consensus 260 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~---~~~~~~~~~~~ 329 (447)
T 3dw8_B 260 ------ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR---PVETYQVHEYL 329 (447)
T ss_dssp ------SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS---CSCCEESCGGG
T ss_pred ------ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc---ccceeeccccc
Confidence 111112455556654 8999999999999999999 9999999987 54 33444455432
Q ss_pred ---------------eEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeee---------------------------
Q 038568 282 ---------------LLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAF--------------------------- 317 (357)
Q Consensus 282 ---------------v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~--------------------------- 317 (357)
+..++|+++ +|++|+.||.|++||+.+++.......
T Consensus 330 ~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (447)
T 3dw8_B 330 RSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEIS 409 (447)
T ss_dssp TTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEE
T ss_pred cccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccc
Confidence 223566655 999999999999999998743211100
Q ss_pred --ecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 318 --LEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 318 --~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
...+...|..++|+|+++ +|++++.|+ +.+|
T Consensus 410 ~~~~~~~~~i~~~~~~p~~~-------~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 410 VDSLDFNKKILHTAWHPKEN-------IIAVATTNN-LYIF 442 (447)
T ss_dssp GGGCCTTSCCCEEEECSSSS-------EEEEECSSC-EEEE
T ss_pred ccccccCCceeEEEECCCCC-------EEEEEecce-eeee
Confidence 012356799999999998 999998886 5555
No 71
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-38 Score=265.37 Aligned_cols=278 Identities=12% Similarity=0.155 Sum_probs=206.9
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCc----cccceeccccCCCCceEEEEEec--Cc--eEEeecCCeEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDY----SHVDTFSNDLSSSGSVKSITFHI--TK--IFTAHQDCKIRV 96 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~----~~~~~~~~~~~~~~~v~~l~~~~--~~--l~~~~~d~~i~v 96 (357)
|.+.|++++|+ +++||+|+.| .|++||+ .++ +....+.+ |...|++++|+| ++ |++++.||.|++
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~-~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKL-DKDTSNWELSDSWRA---HDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEE-CSSSCCEEEEEEEEC---CSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEEC-CCCCCcceecceecc---CCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 99999999999 8999999999 9999999 654 35566676 999999999998 34 999999999999
Q ss_pred EecCCccce------eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEE
Q 038568 97 WKITASRQH------QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKI 166 (357)
Q Consensus 97 wd~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i 166 (357)
||+++++.. ..+. .+..|...|.+++|+| .++++++.||.|++
T Consensus 86 wd~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~i 138 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLC---------------------------TLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRL 138 (351)
T ss_dssp EEECTTSCTTSSCSEEEEE---------------------------EECCCSSCEEEEEECCGGGCSEEEEEETTCEEEE
T ss_pred EecCCCcccccccCcceee---------------------------eecccCCceeEEEEcCCCCCcEEEEecCCCcEEE
Confidence 999876421 1111 1237889999999998 48999999999999
Q ss_pred EEcCcchhhhhcc------------ccccccEEEEEEecC---C-eEEEEeCCCeEEEEEccccccccccccceeeeeEe
Q 038568 167 WNASNYKCLESVN------------KAHEDAVNAVVVSDN---G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL 230 (357)
Q Consensus 167 wd~~~~~~~~~~~------------~~~~~~v~~~~~~~~---~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 230 (357)
||+++++.+..+. ..+...+.+++|+|+ + .+++++.++.+.+|+.. .........+
T Consensus 139 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~ 210 (351)
T 3f3f_A 139 YDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK--------DGKLHVAAKL 210 (351)
T ss_dssp EECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT--------TSCEEEEEEC
T ss_pred ecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC--------CCceeeeeec
Confidence 9999888776652 257788999999996 4 69999999999887765 1223446677
Q ss_pred eccccceeEEEEecCC----CEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eE----EEecCCCe
Q 038568 231 VKHRSTVNALALNGDG----SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LL----ASGSADRT 300 (357)
Q Consensus 231 ~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l----~~~~~dg~ 300 (357)
.+|...|++++|+|++ ++|++++.||.|++||++........ ..+............ .+ ..+.....
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS---EESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc---CCcccceeccCCCccccccccccccccccee
Confidence 8899999999999998 89999999999999999976532221 112222222222222 22 23334455
Q ss_pred EEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 301 VRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 301 i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.+|+..+ .+.+..+.+|...|++++|+|+++ +|++++.||.|++||
T Consensus 288 ~~~~~~~~---~~~~~~~~~h~~~v~~~~~s~~~~-------~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 288 AELQSNLQ---VELLSEHDDHNGEVWSVSWNLTGT-------ILSSAGDDGKVRLWK 334 (351)
T ss_dssp ---CCSEE---EEEEEEECTTSSCEEEEEECSSSC-------CEEEEETTSCEEEEE
T ss_pred eeeccccc---ccEEEEEecccccEEEEEEcCCCC-------EEEEecCCCcEEEEe
Confidence 56665554 477888999999999999999998 999999999999996
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.3e-38 Score=267.02 Aligned_cols=241 Identities=20% Similarity=0.422 Sum_probs=200.7
Q ss_pred cceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccc
Q 038568 30 MIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQ 104 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~ 104 (357)
..|++++|+ +++|++|+.| .|+|||+ .+++.+..+.+ |...|.+++|+|++ |++++.|++|++||+.+++.
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~-~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDI-ENRKIVMILQG---HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEET-TTTEEEEEECC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEEC-CCCcEEEEEcc---CCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCee
Confidence 359999999 8999999999 9999999 88888888988 99999999999987 99999999999999988764
Q ss_pred eeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhcc--
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVN-- 179 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 179 (357)
...+ .+...+.+++|+| .++++|+.||.|++||+++++.+..+.
T Consensus 200 ~~~~-------------------------------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~ 248 (393)
T 1erj_A 200 SLTL-------------------------------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 248 (393)
T ss_dssp EEEE-------------------------------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--
T ss_pred EEEE-------------------------------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccc
Confidence 4332 3456789999988 789999999999999999887665542
Q ss_pred ----ccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccccccc--ccceeeeeEeeccccceeEEEEecCCCEEEEE
Q 038568 180 ----KAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKER--KSRHMLVTTLVKHRSTVNALALNGDGSLLFSG 252 (357)
Q Consensus 180 ----~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 252 (357)
.+|...|.+++|+|++ .|++++.|+.|++||++........ .........+.+|...|.+++|+|++.+|++|
T Consensus 249 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 328 (393)
T 1erj_A 249 NESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG 328 (393)
T ss_dssp ----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEE
T ss_pred ccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEE
Confidence 3688899999999999 6999999999999999743221110 01233456678899999999999999999999
Q ss_pred ecCCeEEEEecccCCceeeeeeccCCccceEEEeecC--------ceEEEecCCCeEEEeeCCC
Q 038568 253 GCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG--------DLLASGSADRTVRIWQRGK 308 (357)
Q Consensus 253 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~l~~~~~dg~i~vw~~~~ 308 (357)
+.|+.|++||+++++. ...+.+|...|.++++.+ ++|++|+.||.|++|++.+
T Consensus 329 s~D~~v~iwd~~~~~~---~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 329 SKDRGVLFWDKKSGNP---LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ETTSEEEEEETTTCCE---EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred eCCCeEEEEECCCCeE---EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 9999999999998874 456678999999998864 4899999999999999875
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.1e-37 Score=278.35 Aligned_cols=286 Identities=17% Similarity=0.181 Sum_probs=221.0
Q ss_pred CccceeEEEEe--cceEEEeeCCceEEEeccCCc----cccceeccccCCCCc-eEEEEEec--Cc--eEEeecCCeEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASLNEINVFDLISDY----SHVDTFSNDLSSSGS-VKSITFHI--TK--IFTAHQDCKIRV 96 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~----~~~~~~~~~~~~~~~-v~~l~~~~--~~--l~~~~~d~~i~v 96 (357)
|.+.|++++|+ +++|++++.+.|++||+ +++ +....+.+ |... |++++|+| ++ |++++.||.|++
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~~~~v~v~~~-~~~~~~~~~~~~~~~---h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCL-DDGDSKVPPVVQFTG---HGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEETTEEEEEEC-CSSCCSSCSEEEECT---TTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred ccCceeEEEECCCCCEEEEecCCeEEEEEC-CCCCCccccceEEec---CCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 89999999999 88999998339999999 887 78888888 9999 99999999 87 999999999999
Q ss_pred EecCCcc-----ceeeeeecCccccce-eeeecCCCe-EEEecc---------------cccccccccccEEEEEEec--
Q 038568 97 WKITASR-----QHQLVSTLPTVKDRL-IRSVLPNNY-VTVRRH---------------KKRLWLEHWDAVSDLVVKQ-- 152 (357)
Q Consensus 97 wd~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~v~~~~~~~-- 152 (357)
||+.+++ .......+......+ ...+.+++. +..... ....+.+|...|.+++|+|
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCC
Confidence 9997541 111222222111111 122233322 222111 1244568999999999999
Q ss_pred C-eEEEEecCCeEEEEEcCcchhhhhccccccc---cEEEEEEecC-C-eEEEEeCCCeEEEEEccccccccccccceee
Q 038568 153 G-LMYSVSWDRSFKIWNASNYKCLESVNKAHED---AVNAVVVSDN-G-VVYTGSADGRIRVWERSVVDHNKERKSRHML 226 (357)
Q Consensus 153 ~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 226 (357)
. .+++++.|+.|++||+.+++.+..+ ..|.. .|.+++|+|+ + +|++++.|+.|++||++ ..+.
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~----------~~~~ 241 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK----------SGEF 241 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT----------TCCE
T ss_pred CcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC----------CCCE
Confidence 3 8999999999999999999988888 77888 9999999999 7 69999999999999997 3455
Q ss_pred eeEe-e---ccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeec-cCCccceEEEee-cCceEEEecCCCe
Q 038568 227 VTTL-V---KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEAL-WGHTGALLCLIN-VGDLLASGSADRT 300 (357)
Q Consensus 227 ~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~-~~~~l~~~~~dg~ 300 (357)
+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++....+... ..+...+.++.+ .++++++++.||.
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 320 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC
T ss_pred eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCC
Confidence 5666 5 799999999999 9999999999999999999987654333221 122456666666 4559999999999
Q ss_pred EEEeeCCCCcceeeeeeecCCcCceEEEEEeeC
Q 038568 301 VRIWQRGKENCYRCMAFLEGHEKPVKSLVAISS 333 (357)
Q Consensus 301 i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 333 (357)
|++||+.++ +.+..+.+|..+|++++| |+
T Consensus 321 i~~~d~~~~---~~~~~~~~~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 321 LNFYELGHD---EVLKTISGHNKGITALTV-NP 349 (615)
T ss_dssp EEEEETTEE---EEEEEECCCSSCEEEEET-TT
T ss_pred EEEEECCCC---cEEEEEeCCCCCEEEEEe-cC
Confidence 999999975 566677777777777766 54
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=288.81 Aligned_cols=319 Identities=11% Similarity=0.135 Sum_probs=222.9
Q ss_pred CccceeEEEEe---cceEEEeeCC-ceEEEeccCCccccceeccc---------------cCCCCceEEEEEecCc--eE
Q 038568 28 HHMIISCLAVH---NSLLYAASLN-EINVFDLISDYSHVDTFSND---------------LSSSGSVKSITFHITK--IF 86 (357)
Q Consensus 28 h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~---------------~~~~~~v~~l~~~~~~--l~ 86 (357)
|.++|++++|+ +..|++|+.| .| +||+ .+++.+..+... ..|...|++++|+|++ |+
T Consensus 150 h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 150 RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSL-VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp CCCCCCEEEEETTEEEEEEEECSSCEE-EEET-TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred CCCCeEEEEEccCCCCEEEEEeCCCcE-EEEC-CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 99999999999 3689999999 99 9999 888887777651 1135789999999987 99
Q ss_pred EeecCCeEEEEecCCccceee--eeec--Cc-----------cccceee-ee----cCCC-eEEEec-cc----------
Q 038568 87 TAHQDCKIRVWKITASRQHQL--VSTL--PT-----------VKDRLIR-SV----LPNN-YVTVRR-HK---------- 134 (357)
Q Consensus 87 ~~~~d~~i~vwd~~~~~~~~~--~~~~--~~-----------~~~~~~~-~~----~~~~-~~~~~~-~~---------- 134 (357)
+++.||+|++||+.+++.... +... .. ....+.. .+ .++. .+.+.+ ..
T Consensus 228 sgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~ 307 (902)
T 2oaj_A 228 TIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTM 307 (902)
T ss_dssp EEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEE
T ss_pred EEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEE
Confidence 999999999999988765432 1100 00 0111111 11 1111 111111 10
Q ss_pred --------------------------ccccc-cccccEEEEEEec------------CeEEEEecCCeEEEEEcCcchhh
Q 038568 135 --------------------------KRLWL-EHWDAVSDLVVKQ------------GLMYSVSWDRSFKIWNASNYKCL 175 (357)
Q Consensus 135 --------------------------~~~~~-~~~~~v~~~~~~~------------~~l~~~~~dg~i~iwd~~~~~~~ 175 (357)
...+. .+...|.++.+.+ ..+++++.||.|++||+.++...
T Consensus 308 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~ 387 (902)
T 2oaj_A 308 IDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFT 387 (902)
T ss_dssp EEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEE
T ss_pred EecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcc
Confidence 11111 3456677777633 26888999999999998766422
Q ss_pred hh-------ccccccccEEE----------------------------------EEEecCC-eEEEEeCCCeEEEEEccc
Q 038568 176 ES-------VNKAHEDAVNA----------------------------------VVVSDNG-VVYTGSADGRIRVWERSV 213 (357)
Q Consensus 176 ~~-------~~~~~~~~v~~----------------------------------~~~~~~~-~l~~~~~d~~i~i~d~~~ 213 (357)
.. + ..|...|++ ++|+|++ .|++|+.|++|++||+..
T Consensus 388 ~~~~~~~~~l-~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~ 466 (902)
T 2oaj_A 388 DKASLFPQNL-SWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASH 466 (902)
T ss_dssp CCGGGSCGGG-TTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSC
T ss_pred cccccCCCcc-cccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCC
Confidence 11 1 223344444 4456777 599999999999999973
Q ss_pred cccccccccceeeeeEe-----eccccceeEEEEecCCCEEEEEecCCeEEEEecccCCc--------------------
Q 038568 214 VDHNKERKSRHMLVTTL-----VKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHR-------------------- 268 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~-------------------- 268 (357)
..... .......+ .+|...|.+++|+|++++||+|+.||+|++||+.+++.
T Consensus 467 g~~~~----~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 542 (902)
T 2oaj_A 467 GDIQD----NASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFS 542 (902)
T ss_dssp CTTTT----TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCC
T ss_pred ccccC----CceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeecc
Confidence 31100 00011111 17889999999999999999999999999999987631
Q ss_pred ----------------------eeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCccee--eeeeec-CCc
Q 038568 269 ----------------------MVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYR--CMAFLE-GHE 322 (357)
Q Consensus 269 ----------------------~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~--~~~~~~-~h~ 322 (357)
+.+...+.+|.+.|.+++|+++ +||+|+.|++|++||++++.... .+..+. +|.
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~ 622 (902)
T 2oaj_A 543 LNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQS 622 (902)
T ss_dssp GGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCC
T ss_pred ccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEEeehhHhccccc
Confidence 1235567789999999999887 99999999999999998763211 112343 899
Q ss_pred CceEEEEEe-----eCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 323 KPVKSLVAI-----SSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 323 ~~v~~~~~~-----~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.|++++|+ ||+. .+.+|++|+.||+|++||
T Consensus 623 ~~V~sv~Fs~~~~~~Dg~----~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 623 ACVTCIEFVIMEYGDDGY----SSILMVCGTDMGEVITYK 658 (902)
T ss_dssp CCEEEEEEEEEECTTSSS----EEEEEEEEETTSEEEEEE
T ss_pred cceEEEEEEEEecCCCCC----cceEEEEEecCCcEEEEE
Confidence 999999999 8751 223999999999999997
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=262.87 Aligned_cols=257 Identities=19% Similarity=0.248 Sum_probs=209.1
Q ss_pred eecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccC--CccccceeccccCCCCceEEEEEecC--c--e
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLIS--DYSHVDTFSNDLSSSGSVKSITFHIT--K--I 85 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~--~~~~~~~~~~~~~~~~~v~~l~~~~~--~--l 85 (357)
++++.+++ |.+.|++++|+ +++||+|+.| .|+|||+ . +.+.+..+.+ |...|++++|+++ + |
T Consensus 2 ~~~~~~~~-----h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~-~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l 72 (379)
T 3jrp_A 2 SMVVIANA-----HNELIHDAVLDYYGKRLATCSSDKTIKIFEV-EGETHKLIDTLTG---HEGPVWRVDWAHPKFGTIL 72 (379)
T ss_dssp ---CCEEE-----CCCCEEEEEECSSSSEEEEEETTSCEEEEEE-ETTEEEEEEEECC---CSSCEEEEEECCGGGCSEE
T ss_pred CccEEecC-----CcccEEEEEEcCCCCEEEEEECCCcEEEEec-CCCcceeeeEecC---CCCcEEEEEeCCCCCCCEE
Confidence 45666776 99999999999 8999999999 9999999 6 5667778887 9999999999865 3 9
Q ss_pred EEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecC
Q 038568 86 FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWD 161 (357)
Q Consensus 86 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~d 161 (357)
++++.||.|++||+.+++... .... ..|...|.+++|+| .++++++.|
T Consensus 73 ~s~~~dg~v~iwd~~~~~~~~-~~~~---------------------------~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 73 ASCSYDGKVLIWKEENGRWSQ-IAVH---------------------------AVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp EEEETTSCEEEEEEETTEEEE-EEEE---------------------------CCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred EEeccCCEEEEEEcCCCceeE-eeee---------------------------cCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 999999999999998875221 1111 27889999999998 489999999
Q ss_pred CeEEEEEcCcchhhh--hccccccccEEEEEEec-------------CC-eEEEEeCCCeEEEEEcccccccccccccee
Q 038568 162 RSFKIWNASNYKCLE--SVNKAHEDAVNAVVVSD-------------NG-VVYTGSADGRIRVWERSVVDHNKERKSRHM 225 (357)
Q Consensus 162 g~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~-------------~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 225 (357)
|.|++||++++.... .+ ..|...|.+++|+| ++ .+++++.|+.|++||++ .......
T Consensus 125 ~~i~v~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~------~~~~~~~ 197 (379)
T 3jrp_A 125 GKVSVVEFKENGTTSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN------SDAQTYV 197 (379)
T ss_dssp SEEEEEECCTTSCCCEEEE-ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEE------TTTTEEE
T ss_pred CcEEEEecCCCCceeeEEe-cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEec------CCCccee
Confidence 999999998874332 33 57889999999999 45 69999999999999998 3333455
Q ss_pred eeeEeeccccceeEEEEecC---CCEEEEEecCCeEEEEecccCCcee--eeeeccCCccceEEEeecCc--eEEEecCC
Q 038568 226 LVTTLVKHRSTVNALALNGD---GSLLFSGGCDRWIVVWERERDHRMV--FAEALWGHTGALLCLINVGD--LLASGSAD 298 (357)
Q Consensus 226 ~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~l~~~~~d 298 (357)
....+.+|...|.+++|+|+ +++|++++.||.|++||++++.... .......|...+.+++|+++ +|++++.|
T Consensus 198 ~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 277 (379)
T 3jrp_A 198 LESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGD 277 (379)
T ss_dssp EEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESS
T ss_pred eEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCC
Confidence 66778889999999999999 8999999999999999999764322 22233458889999999877 99999999
Q ss_pred CeEEEeeCCCCcceeee
Q 038568 299 RTVRIWQRGKENCYRCM 315 (357)
Q Consensus 299 g~i~vw~~~~~~~~~~~ 315 (357)
|.|++|++..+..+..+
T Consensus 278 g~i~iw~~~~~~~~~~~ 294 (379)
T 3jrp_A 278 NKVTLWKENLEGKWEPA 294 (379)
T ss_dssp SSEEEEEEEETTEEEEE
T ss_pred CcEEEEeCCCCCccccc
Confidence 99999999865433333
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-37 Score=259.01 Aligned_cols=245 Identities=23% Similarity=0.323 Sum_probs=196.4
Q ss_pred eecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH 89 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~ 89 (357)
++...+.+ |...|++++|+ +.+|++|+.| +|++||+ .+++.+..+.+ |...|.+++|+|++ |++++
T Consensus 67 ~~~~~l~~-----h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~-~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~~ 137 (343)
T 2xzm_R 67 IPHKALTG-----HNHFVSDLALSQENCFAISSSWDKTLRLWDL-RTGTTYKRFVG---HQSEVYSVAFSPDNRQILSAG 137 (343)
T ss_dssp EEEEEECC-----CSSCEEEEEECSSTTEEEEEETTSEEEEEET-TSSCEEEEEEC---CCSCEEEEEECSSTTEEEEEE
T ss_pred cccchhcc-----CCCceEEEEECCCCCEEEEEcCCCcEEEEEC-CCCcEEEEEcC---CCCcEEEEEECCCCCEEEEEc
Confidence 44556665 99999999999 8899999999 9999999 88899999988 99999999999987 99999
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec------------CeEEE
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ------------GLMYS 157 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------~~l~~ 157 (357)
.|++|++||+..... ..... ...|...|.+++|+| .++++
T Consensus 138 ~d~~i~~wd~~~~~~-~~~~~---------------------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s 189 (343)
T 2xzm_R 138 AEREIKLWNILGECK-FSSAE---------------------------KENHSDWVSCVRYSPIMKSANKVQPFAPYFAS 189 (343)
T ss_dssp TTSCEEEEESSSCEE-EECCT---------------------------TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEE
T ss_pred CCCEEEEEeccCCce-eeeec---------------------------ccCCCceeeeeeeccccccccccCCCCCEEEE
Confidence 999999999974321 11111 126888999999998 27999
Q ss_pred EecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccc
Q 038568 158 VSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236 (357)
Q Consensus 158 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
++.||.|++||. ..+....+ ..|...|.+++|+|++ +|++|+.|+.|++||++. .......+ .+...
T Consensus 190 ~~~d~~i~iwd~-~~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~---------~~~~~~~~-~~~~~ 257 (343)
T 2xzm_R 190 VGWDGRLKVWNT-NFQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN---------LTYPQREF-DAGST 257 (343)
T ss_dssp EETTSEEEEEET-TTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC---------CSSCSEEE-ECSSC
T ss_pred EcCCCEEEEEcC-CCceeEEE-cCccccceEEEECCCCCEEEEEcCCCeEEEEECCC---------Ccccceee-cCCCc
Confidence 999999999994 44555566 7899999999999999 699999999999999851 11122222 24567
Q ss_pred eeEEEEecCCCEEEEEecCCeEEEEecccCCcee--eee--------eccCCccceEEEeecCc--eEEEecCCCeEEEe
Q 038568 237 VNALALNGDGSLLFSGGCDRWIVVWERERDHRMV--FAE--------ALWGHTGALLCLINVGD--LLASGSADRTVRIW 304 (357)
Q Consensus 237 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~--------~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw 304 (357)
|.+++|+|++.+++++ .|+.|++||+.+.+... .+. ...+|...+.+++|+|+ +|++|+.||.|++|
T Consensus 258 v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w 336 (343)
T 2xzm_R 258 INQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTF 336 (343)
T ss_dssp EEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEE
T ss_pred EEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEE
Confidence 9999999999877655 57789999998765432 111 11268888999999876 99999999999999
Q ss_pred eCCCC
Q 038568 305 QRGKE 309 (357)
Q Consensus 305 ~~~~~ 309 (357)
+++++
T Consensus 337 ~~~~g 341 (343)
T 2xzm_R 337 SFETS 341 (343)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 98764
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.1e-38 Score=302.69 Aligned_cols=288 Identities=19% Similarity=0.307 Sum_probs=238.8
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecC--c-
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT--K- 84 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~- 84 (357)
..+++++..+++ |.+.|++++|+ +++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+|+ .
T Consensus 644 ~~~~~~~~~~~~-----h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~-~~~~~~~~~~~---~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 644 AETGEKLLDIKA-----HEDEVLCCAFSSDDSYIATCSADKKVKIWDS-ATGKLVHTYDE---HSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp TTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TTCCEEEEEEC---CSSCEEEEEECSSSSCC
T ss_pred CCCCCEEEEecc-----CCCCEEEEEEecCCCEEEEEeCCCeEEEEEC-CCCceEEEEcC---CCCcEEEEEEecCCCce
Confidence 345667777776 99999999999 8999999999 9999999 89999999998 9999999999984 3
Q ss_pred -eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC
Q 038568 85 -IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD 161 (357)
Q Consensus 85 -l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d 161 (357)
+++++.|+.|++||+.+++....+. +|...|.+++|+| .++++++.|
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~------------------------------~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMF------------------------------GHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEEC------------------------------CCSSCEEEEEECSSTTEEEEEESS
T ss_pred EEEEEeCCCeEEEEECCCcchhheec------------------------------CCCCCEEEEEEecCCCEEEEEECC
Confidence 8899999999999999886544332 7888899999988 788899999
Q ss_pred CeEEEEEcCcchhhhhc------------------------------------------------------cccccccEE
Q 038568 162 RSFKIWNASNYKCLESV------------------------------------------------------NKAHEDAVN 187 (357)
Q Consensus 162 g~i~iwd~~~~~~~~~~------------------------------------------------------~~~~~~~v~ 187 (357)
|.|++||+.+++....+ ...|...+.
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 99999988765432221 125677889
Q ss_pred EEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccC
Q 038568 188 AVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERD 266 (357)
Q Consensus 188 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 266 (357)
+++|+|++ .+++++.|+.|++||+. .......+.+|...|.+++|+|++++|++++.||.|++||+.+.
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~----------~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNID----------SRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETT----------TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcC----------CCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcccc
Confidence 99999988 68999999999999987 45667788899999999999999999999999999999997642
Q ss_pred Ccee-----------------------------eee-----eccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc
Q 038568 267 HRMV-----------------------------FAE-----ALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 267 ~~~~-----------------------------~~~-----~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~ 310 (357)
.... ... ....+...+.+++++++ ++++|+.||.|++|++.++
T Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~- 993 (1249)
T 3sfz_A 915 CKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN- 993 (1249)
T ss_dssp HSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT-
T ss_pred ceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC-
Confidence 1100 000 00112445777888776 9999999999999999987
Q ss_pred ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 311 CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 311 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+....+.+|...|++++|+|+++ +|++++.||.|++||
T Consensus 994 --~~~~~~~~h~~~v~~l~~s~dg~-------~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 994 --RVFSSGVGHKKAVRHIQFTADGK-------TLISSSEDSVIQVWN 1031 (1249)
T ss_dssp --SCEEECCCCSSCCCCEEECSSSS-------CEEEECSSSBEEEEE
T ss_pred --ceeeecccCCCceEEEEECCCCC-------EEEEEcCCCEEEEEE
Confidence 56677889999999999999998 999999999999996
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-37 Score=263.31 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=205.8
Q ss_pred cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 60 SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 60 ~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
+.+..+.+ |...|++++|+|++ |++++.||.|++||+..... .....+
T Consensus 2 ~~~~~~~~---h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~-------------------------- 51 (379)
T 3jrp_A 2 SMVVIANA---HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTL-------------------------- 51 (379)
T ss_dssp ---CCEEE---CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEE--------------------------
T ss_pred CccEEecC---CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-eeeeEe--------------------------
Confidence 45677787 99999999999987 99999999999999974322 122221
Q ss_pred cccccccEEEEEEec----CeEEEEecCCeEEEEEcCcch--hhhhccccccccEEEEEEecC--C-eEEEEeCCCeEEE
Q 038568 138 WLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDN--G-VVYTGSADGRIRV 208 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~d~~i~i 208 (357)
.+|...|.+++|++ .+|++++.||.|++||+.+++ .+..+ ..|...|.+++|+|+ + .|++++.|+.|++
T Consensus 52 -~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 52 -TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp -CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred -cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 28999999999974 799999999999999999886 55566 678999999999998 6 6999999999999
Q ss_pred EEccccccccccccceeeeeEeeccccceeEEEEec-------------CCCEEEEEecCCeEEEEecccCCce-eeeee
Q 038568 209 WERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG-------------DGSLLFSGGCDRWIVVWERERDHRM-VFAEA 274 (357)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~ 274 (357)
||++. . .......+..|...|.+++|+| ++.+|++++.||.|++||++++... .....
T Consensus 130 ~d~~~------~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 201 (379)
T 3jrp_A 130 VEFKE------N--GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST 201 (379)
T ss_dssp EECCT------T--SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE
T ss_pred EecCC------C--CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE
Confidence 99982 1 1223345678999999999999 6999999999999999999876543 34456
Q ss_pred ccCCccceEEEeecC-----ceEEEecCCCeEEEeeCCCCccee--eeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEc
Q 038568 275 LWGHTGALLCLINVG-----DLLASGSADRTVRIWQRGKENCYR--CMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSG 347 (357)
Q Consensus 275 ~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~vw~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~ 347 (357)
+.+|...|.+++|++ .+|++++.||.|++||++++.... .+.....|...|++++|+|+++ +|+++
T Consensus 202 ~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-------~l~~~ 274 (379)
T 3jrp_A 202 LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-------VLALS 274 (379)
T ss_dssp ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-------CEEEE
T ss_pred EecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-------EEEEe
Confidence 778999999999985 489999999999999999864222 2333345889999999999998 99999
Q ss_pred CCCCeEEecC
Q 038568 348 SLNGEIKVWD 357 (357)
Q Consensus 348 ~~dg~v~~wd 357 (357)
+.||.|++||
T Consensus 275 ~~dg~i~iw~ 284 (379)
T 3jrp_A 275 GGDNKVTLWK 284 (379)
T ss_dssp ESSSSEEEEE
T ss_pred cCCCcEEEEe
Confidence 9999999996
No 79
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.2e-38 Score=266.15 Aligned_cols=280 Identities=16% Similarity=0.244 Sum_probs=216.6
Q ss_pred ceeEEEEecc---eEEEeeCC-ceEEEeccCCcc---ccceeccccCCCCceEEEEEec-Cc--eEEeecCCeEEEEecC
Q 038568 31 IISCLAVHNS---LLYAASLN-EINVFDLISDYS---HVDTFSNDLSSSGSVKSITFHI-TK--IFTAHQDCKIRVWKIT 100 (357)
Q Consensus 31 ~i~~~~~s~~---~l~t~~~d-~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~l~~~~-~~--l~~~~~d~~i~vwd~~ 100 (357)
....++++.+ ++++++.| .|+||++...++ .+..+.+ |.+.|++++|+| ++ |++++.||+|++||+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~---h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCG---HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCC---CSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEec---CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 4455777733 44457788 999999933333 3445666 999999999999 65 9999999999999998
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhh
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLES 177 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~ 177 (357)
++........ ....+.+|...|.+++|+| .+|++++.||.|++||+++++.+..
T Consensus 113 ~~~~~~~~~~-----------------------~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 113 DGGLVLPLRE-----------------------PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp TTCCSSCBCS-----------------------CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCCCccccCC-----------------------ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEE
Confidence 8743211100 0012238999999999999 4899999999999999999988877
Q ss_pred cc-ccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEe-eccccc-eeEEEEecCCCEEEEE-
Q 038568 178 VN-KAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRST-VNALALNGDGSLLFSG- 252 (357)
Q Consensus 178 ~~-~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~- 252 (357)
+. ..|...|.+++|+|++ +|++++.|+.|++||++ ....+..+ ..|... +.++.|+|++++|++|
T Consensus 170 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 239 (402)
T 2aq5_A 170 LGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR----------KGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGF 239 (402)
T ss_dssp ECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT----------TTEEEEEEECSSCSSSCCEEEECSTTEEEEEEE
T ss_pred EecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC----------CCceeeeeccCCCCCcceEEEEcCCCcEEEEec
Confidence 64 5688999999999998 69999999999999998 34455566 577765 8999999999999999
Q ss_pred --ecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eE-EEecCCCeEEEeeCCCCcc-eeeeeeecCCcCceE
Q 038568 253 --GCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LL-ASGSADRTVRIWQRGKENC-YRCMAFLEGHEKPVK 326 (357)
Q Consensus 253 --~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l-~~~~~dg~i~vw~~~~~~~-~~~~~~~~~h~~~v~ 326 (357)
+.|+.|++||+++......... ..|...+.++.|+++ +| ++|+.||.|++||+.+++. ...+..+. |..+|+
T Consensus 240 ~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~ 317 (402)
T 2aq5_A 240 SRMSERQVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQR 317 (402)
T ss_dssp CTTCCEEEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCS
T ss_pred cCCCCceEEEEcCccccCCceEEe-ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCccc
Confidence 7999999999998765322222 246677888888876 56 4667899999999998753 33444444 678999
Q ss_pred EEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 327 SLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+++|+|++. ++++ .|+.+++|+
T Consensus 318 ~~~~sp~~~-------~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 318 GMGYMPKRG-------LEVN--KCEIARFYK 339 (402)
T ss_dssp EEEECCGGG-------SCGG--GTEEEEEEE
T ss_pred ceEEecccc-------ccee--cceeEEEEE
Confidence 999999987 6654 466899985
No 80
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-38 Score=289.88 Aligned_cols=194 Identities=10% Similarity=0.099 Sum_probs=163.7
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCcc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASR 103 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~ 103 (357)
|.+.|++++|+ +++||+|+.| .|+||+. ...+....+. |..+|.+++|+|+. |++++.|++|++||+.+++
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~-~~~~~~~~~~----~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQ-QQVEVVIKLE----DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECS-TTCEEEEECS----SCCCEEEEEEETTTEEEEEETTCEEEEEETTTCS
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeC-CCcEEEEEcC----CCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCc
Confidence 99999999999 8999999999 9999999 7766555543 88899999999966 9999999999999999876
Q ss_pred ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhh------
Q 038568 104 QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCL------ 175 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~------ 175 (357)
....+ .|...|++++|+| +++++|+.||.|++||+++++..
T Consensus 91 ~~~~~-------------------------------~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~ 139 (902)
T 2oaj_A 91 VLTTV-------------------------------FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDN 139 (902)
T ss_dssp EEEEE-------------------------------ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECC
T ss_pred EEEEE-------------------------------cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecc
Confidence 54333 3457899999999 89999999999999999887643
Q ss_pred -----hhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeec----------------
Q 038568 176 -----ESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK---------------- 232 (357)
Q Consensus 176 -----~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~---------------- 232 (357)
..+ ..|...|.+++|+|++ .+++|+.|+.| +||++ ..+....+..
T Consensus 140 ~~~~~~~~-~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~----------~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (902)
T 2oaj_A 140 LQKSSFFP-AARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLV----------ENEIKQSFIYELPPFAPGGDFSEKTN 207 (902)
T ss_dssp HHHHHTCS-SSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETT----------TTEEEEEECCCBCTTCCCSTTCCCTT
T ss_pred cccccccc-ccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECC----------CCceEEEEecccCCcCCCcccccccc
Confidence 223 5788999999999974 69999999999 99998 2333334433
Q ss_pred --cccceeEEEEecCCCEEEEEecCCeEEEEecccCCce
Q 038568 233 --HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM 269 (357)
Q Consensus 233 --~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 269 (357)
|...|.+++|+|+|++|++++.||.|++||+++++.+
T Consensus 208 ~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 208 EKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp SCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred cccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 3578999999999999999999999999999887643
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.4e-37 Score=274.06 Aligned_cols=285 Identities=12% Similarity=0.142 Sum_probs=221.1
Q ss_pred ceecccccCCCCCCCccceeEEEEe--cc-eEEEeeCC-ceEEEeccCCccccceeccccCCCC---ceEEEEEecC-c-
Q 038568 14 HHCIASLKIPSPDPHHMIISCLAVH--NS-LLYAASLN-EINVFDLISDYSHVDTFSNDLSSSG---SVKSITFHIT-K- 84 (357)
Q Consensus 14 ~~~~~~~~~~~g~~h~~~i~~~~~s--~~-~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~-~- 84 (357)
.+.+..+.+ |...|++++|+ ++ +|++++.| .|++||. .+++.+..+.+ |.. .|.+++|+|+ +
T Consensus 150 ~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~-~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~ 220 (615)
T 1pgu_A 150 GNSLGEVSG-----HSQRINACHLKQSRPMRSMTVGDDGSVVFYQG-PPFKFSASDRT---HHKQGSFVRDVEFSPDSGE 220 (615)
T ss_dssp CCEEEECCS-----CSSCEEEEEECSSSSCEEEEEETTTEEEEEET-TTBEEEEEECS---SSCTTCCEEEEEECSTTCC
T ss_pred CCcceeeec-----CCccEEEEEECCCCCcEEEEEeCCCcEEEEeC-CCcceeeeecc---cCCCCceEEEEEECCCCCC
Confidence 345556665 99999999999 54 89999999 9999999 88899999987 888 9999999998 6
Q ss_pred -eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCC
Q 038568 85 -IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDR 162 (357)
Q Consensus 85 -l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg 162 (357)
|++++.|+.|++||+.+++....+.... ..|...|.+++|+. .++++++.||
T Consensus 221 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------------------------~~~~~~v~~~~~~~~~~l~~~~~d~ 274 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSGEFLKYIEDDQ--------------------------EPVQGGIFALSWLDSQKFATVGADA 274 (615)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEECCBTT--------------------------BCCCSCEEEEEESSSSEEEEEETTS
T ss_pred EEEEEeCCCeEEEEECCCCCEeEEecccc--------------------------cccCCceEEEEEcCCCEEEEEcCCC
Confidence 9999999999999998876554331100 16788999999965 8999999999
Q ss_pred eEEEEEcCcchhhhhccccc----cccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeec------
Q 038568 163 SFKIWNASNYKCLESVNKAH----EDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK------ 232 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~------ 232 (357)
.|++||+++++.+..+ ..+ ...+.++.+.....+++++.|+.|++||++. ......+.+
T Consensus 275 ~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~----------~~~~~~~~~~~~~v~ 343 (615)
T 1pgu_A 275 TIRVWDVTTSKCVQKW-TLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGH----------DEVLKTISGHNKGIT 343 (615)
T ss_dssp EEEEEETTTTEEEEEE-ECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTE----------EEEEEEECCCSSCEE
T ss_pred cEEEEECCCCcEEEEE-cCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCC----------CcEEEEEeCCCCCEE
Confidence 9999999998888777 333 4678888887555899999999999999873 222222222
Q ss_pred ---------------------------cccceeEEEEecCCCEEEEEec-------------------------------
Q 038568 233 ---------------------------HRSTVNALALNGDGSLLFSGGC------------------------------- 254 (357)
Q Consensus 233 ---------------------------~~~~v~~~~~~~~~~~l~~~~~------------------------------- 254 (357)
|...|.+++| +++..|++++.
T Consensus 344 ~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~ 422 (615)
T 1pgu_A 344 ALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV 422 (615)
T ss_dssp EEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEE
T ss_pred EEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEE
Confidence 3333333333 22334444444
Q ss_pred -------------------------------------------CCeEEEEecccCCceeeeeeccCCccceEEEeecCc-
Q 038568 255 -------------------------------------------DRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD- 290 (357)
Q Consensus 255 -------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 290 (357)
|+.|++||+.+++... ..+.+|...+.+++|+++
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g 500 (615)
T 1pgu_A 423 LTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSE 500 (615)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTS
T ss_pred EeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCC
Confidence 4444444444332111 456678999999999776
Q ss_pred -eEEEecCCCeEEEeeCCCCcceeeeeeecC-CcCceEEEEEee----------CCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 291 -LLASGSADRTVRIWQRGKENCYRCMAFLEG-HEKPVKSLVAIS----------SSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 291 -~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-h~~~v~~~~~~~----------~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|++++.||.|++||+.++ +.+..+.+ |...|++++|+| +++ +|++++.||.|++||
T Consensus 501 ~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~-------~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 501 TYIAAGDVMGKILLYDLQSR---EVKTSRWAFRTSKINAISWKPAEKGANEEEIEED-------LVATGSLDTNIFIYS 569 (615)
T ss_dssp SEEEEEETTSCEEEEETTTT---EEEECCSCCCSSCEEEEEECCCC------CCSCC-------EEEEEETTSCEEEEE
T ss_pred CEEEEcCCCCeEEEeeCCCC---cceeEeecCCCCceeEEEEcCccccccccccCCC-------EEEEEcCCCcEEEEE
Confidence 9999999999999999987 66677777 999999999999 888 999999999999996
No 82
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.7e-37 Score=265.91 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=214.7
Q ss_pred ccceecccccCCCCCCCccceeEEEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeec
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQ 90 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 90 (357)
.+.++...+.+ |.+.|.+++|++++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+++.+++++.
T Consensus 161 ~~~~~~~~~~~-----h~~~v~~l~~~~~~l~sg~~dg~i~vwd~-~~~~~~~~~~~---h~~~v~~l~~~~~~l~s~s~ 231 (435)
T 1p22_A 161 NTLECKRILTG-----HTGSVLCLQYDERVIITGSSDSTVRVWDV-NTGEMLNTLIH---HCEAVLHLRFNNGMMVTCSK 231 (435)
T ss_dssp SSCCEEEEECC-----CSSCEEEEECCSSEEEEEETTSCEEEEES-SSCCEEEEECC---CCSCEEEEECCTTEEEEEET
T ss_pred CCCeEEEEEcC-----CCCcEEEEEECCCEEEEEcCCCeEEEEEC-CCCcEEEEEcC---CCCcEEEEEEcCCEEEEeeC
Confidence 45667777775 999999999999999999999 9999999 88899999988 99999999999888999999
Q ss_pred CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcC
Q 038568 91 DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNAS 170 (357)
Q Consensus 91 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~ 170 (357)
||.|++||+.+++........ .+|...|.+++|..+++++|+.||.|++||++
T Consensus 232 dg~i~vwd~~~~~~~~~~~~~---------------------------~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 232 DRSIAVWDMASPTDITLRRVL---------------------------VGHRAAVNVVDFDDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp TSCEEEEECSSSSCCEEEEEE---------------------------CCCSSCEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred CCcEEEEeCCCCCCceeeeEe---------------------------cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECC
Confidence 999999999887654332222 28899999999988999999999999999999
Q ss_pred cchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEE
Q 038568 171 NYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLF 250 (357)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 250 (357)
+++.+..+ ..|...+.++.++ +..+++|+.||.|++||++ ....+..+.+|...|.+++| ++++|+
T Consensus 285 ~~~~~~~~-~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~----------~~~~~~~~~~h~~~v~~~~~--~~~~l~ 350 (435)
T 1p22_A 285 TCEFVRTL-NGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIE----------CGACLRVLEGHEELVRCIRF--DNKRIV 350 (435)
T ss_dssp TCCEEEEE-ECCSSCEEEEEEE-TTEEEEEETTSCEEEEETT----------TCCEEEEECCCSSCEEEEEC--CSSEEE
T ss_pred cCcEEEEE-cCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECC----------CCCEEEEEeCCcCcEEEEEe--cCCEEE
Confidence 99999888 7899999999995 3489999999999999998 45677788899999999999 678999
Q ss_pred EEecCCeEEEEecccCCce------eeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCC
Q 038568 251 SGGCDRWIVVWERERDHRM------VFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 251 ~~~~dg~i~vwd~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~ 309 (357)
+|+.||.|++||+.++... .....+.+|...|.+++|++.+|++++.||.|++||+.+.
T Consensus 351 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC----
T ss_pred EEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEEEEEECCCC
Confidence 9999999999999765421 1345677899999999998889999999999999999876
No 83
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.9e-36 Score=253.17 Aligned_cols=286 Identities=12% Similarity=0.112 Sum_probs=205.7
Q ss_pred cceecccccCCCCCCCccceeEEEEe--cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc---eEE
Q 038568 13 KHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK---IFT 87 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~ 87 (357)
..+++.+++. |.+.|++++|+ |++||+|+.+.++||+. ++.+....... ..+..+++.++. +++
T Consensus 8 ~~~~~~~~~~-----h~~~V~~v~fs~dg~~la~g~~~~~~iw~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 8 TRNPIVPENH-----VSNPVTDYEFNQDQSCLILSTLKSFEIYNV-HPVAHIMSQEM-----RHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSEEEEEEE-TTEEEEEEEEC-----SCCCEEEECTTSSEEEEE
T ss_pred ccCCcccccc-----CCCceEEEEECCCCCEEEEEcCCEEEEEec-CCcceeeeeec-----CCeEEEEEcCCCCEEEEE
Confidence 3444555554 99999999999 89999988777889999 77665554432 246667777654 467
Q ss_pred eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEE
Q 038568 88 AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIW 167 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iw 167 (357)
++.|++|++||+.+++....+ .+...|.++.++++.++++. |+.|++|
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~-------------------------------~~~~~v~~v~~~~~~~~~~~-~~~i~i~ 124 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRI-------------------------------KVDAPVKDLFLSREFIVVSY-GDVISVF 124 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEE-------------------------------ECSSCEEEEEECSSEEEEEE-TTEEEEE
T ss_pred ECCccEEEEEECCCCcEEEEE-------------------------------ECCCceEEEEEcCCEEEEEE-cCEEEEE
Confidence 888899999999988655433 35568999999996666654 7899999
Q ss_pred EcCcc-hhhhhccccccccEEEEEEecCCeEEE--EeCCCeEEEEEcccccccccc-----ccceee-eeEeecccccee
Q 038568 168 NASNY-KCLESVNKAHEDAVNAVVVSDNGVVYT--GSADGRIRVWERSVVDHNKER-----KSRHML-VTTLVKHRSTVN 238 (357)
Q Consensus 168 d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~-----~~~~~~-~~~~~~~~~~v~ 238 (357)
|+.++ +.+..+ .. +...+++++ ..+++ |+.||.|++||++........ .....+ ...+.+|..+|.
T Consensus 125 d~~~~~~~~~~~-~~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~ 199 (355)
T 3vu4_A 125 KFGNPWKRITDD-IR---FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK 199 (355)
T ss_dssp ESSTTCCBSSCC-EE---EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEE
T ss_pred ECCCCceeeEEe-cc---CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE
Confidence 99988 777776 33 444566667 55544 689999999999832210000 000112 677889999999
Q ss_pred EEEEecCCCEEEEEecCCe-EEEEecccCCceeeeeecc-C-CccceEEEeecCc--eEEEecCCCeEEEeeCCCCccee
Q 038568 239 ALALNGDGSLLFSGGCDRW-IVVWERERDHRMVFAEALW-G-HTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYR 313 (357)
Q Consensus 239 ~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~ 313 (357)
+++|+|++++|++|+.|++ |++||+++++.+ ..+. + |...|.+++|+++ +|++++.|+.|++||++.+...+
T Consensus 200 ~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~---~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 200 MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV---REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK 276 (355)
T ss_dssp EEEECTTSSEEEEEETTCSEEEEEETTTCCEE---EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEECCCCcEE---EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc
Confidence 9999999999999999998 999999988743 4444 4 8999999999886 99999999999999997653111
Q ss_pred eeee---------------------ecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 314 CMAF---------------------LEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 314 ~~~~---------------------~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
... ...+..+...++|+++++ +|++++.||.+++|+
T Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~-------~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 277 -RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS-------LVVVWPHTRMIETFK 333 (355)
T ss_dssp -SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-------EEEEETTTTEEEEEE
T ss_pred -cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-------EEEEEeCCCeEEEEE
Confidence 111 111223347799999998 999999999999985
No 84
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-36 Score=255.51 Aligned_cols=247 Identities=17% Similarity=0.274 Sum_probs=207.0
Q ss_pred CccceeEEEEe-c-----ceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEec-Cc--eEEeecCCeEEEE
Q 038568 28 HHMIISCLAVH-N-----SLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHI-TK--IFTAHQDCKIRVW 97 (357)
Q Consensus 28 h~~~i~~~~~s-~-----~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~--l~~~~~d~~i~vw 97 (357)
|...|++++|+ . ++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+| ++ |++++.||.|++|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~-~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINP-ITMQCIKHYVG---HGNAINELKFHPRDPNLLLSVSKDHALRLW 143 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECT-TTCCEEEEEES---CCSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEc-hhceEeeeecC---CCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 67889999999 2 489999999 9999999 88899999987 999999999999 55 9999999999999
Q ss_pred ecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhh
Q 038568 98 KITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCL 175 (357)
Q Consensus 98 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~ 175 (357)
|+.+++....+... ..|...|.+++|+| ++|++++.||.|++||+++++.+
T Consensus 144 d~~~~~~~~~~~~~---------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 144 NIQTDTLVAIFGGV---------------------------EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp ETTTTEEEEEECST---------------------------TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred EeecCeEEEEeccc---------------------------ccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccc
Confidence 99988655544322 27889999999999 89999999999999999998877
Q ss_pred hhcccc----------------------------ccccEEEEEEecCCeEEEEeCCCeEEEEEcccccccc----ccccc
Q 038568 176 ESVNKA----------------------------HEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNK----ERKSR 223 (357)
Q Consensus 176 ~~~~~~----------------------------~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~ 223 (357)
..+ .. |...|.+++|+ ..++++++.|+.|++||++...... .....
T Consensus 197 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 197 NAI-KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp HHH-HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred ccc-ceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence 665 32 88999999999 4489999999999999987433210 11122
Q ss_pred eeeeeEeeccccceeEEEEecC--CCEEEEEecCCeEEEEecccCCcee-eeeeccCC--ccceEEEeecCc--eEEEec
Q 038568 224 HMLVTTLVKHRSTVNALALNGD--GSLLFSGGCDRWIVVWERERDHRMV-FAEALWGH--TGALLCLINVGD--LLASGS 296 (357)
Q Consensus 224 ~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~--~~~v~~~~~~~~--~l~~~~ 296 (357)
...+..+..|...|.+++|+|+ +++|++|+.||.|++||+.+++... ....+.+| ...|.+++|+++ +|++++
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 354 (366)
T 3k26_A 275 VTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC 354 (366)
T ss_dssp EEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred hheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe
Confidence 3557778889999999999999 9999999999999999999876433 33455566 789999999876 999999
Q ss_pred CCCeEEEeeCC
Q 038568 297 ADRTVRIWQRG 307 (357)
Q Consensus 297 ~dg~i~vw~~~ 307 (357)
.||.|++||+.
T Consensus 355 ~dg~i~iwd~~ 365 (366)
T 3k26_A 355 DDASIWRWDRL 365 (366)
T ss_dssp TTSEEEEEEC-
T ss_pred CCCEEEEEEec
Confidence 99999999986
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-37 Score=266.36 Aligned_cols=252 Identities=12% Similarity=0.206 Sum_probs=196.6
Q ss_pred EEeccCCcccccee-ccccCCCCceEEEEEec-Cc--eEEeecCCeEEEEecCC---ccceeeeeecCccccceeeeecC
Q 038568 52 VFDLISDYSHVDTF-SNDLSSSGSVKSITFHI-TK--IFTAHQDCKIRVWKITA---SRQHQLVSTLPTVKDRLIRSVLP 124 (357)
Q Consensus 52 iw~~~~~~~~~~~~-~~~~~~~~~v~~l~~~~-~~--l~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~ 124 (357)
.|+. +++.+..+ .+ |.+.|++++|+| ++ |++|+.||+|++||+.+ +........
T Consensus 47 ~w~~--~g~~~~~~~~~---h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-------------- 107 (437)
T 3gre_A 47 MGNL--RGKLIATLMEN---EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT-------------- 107 (437)
T ss_dssp GGGC--CCCEEEEECTT---TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE--------------
T ss_pred cccc--cceEEeeeccC---CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee--------------
Confidence 4875 55778888 76 999999999999 76 99999999999999876 321111111
Q ss_pred CCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcC---cchhhhhcc---------cc--ccccEEE
Q 038568 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNAS---NYKCLESVN---------KA--HEDAVNA 188 (357)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~---~~~~~~~~~---------~~--~~~~v~~ 188 (357)
..|...|.+++|+| ++|++++.||.|++||+. +++.+.... .. +...+.+
T Consensus 108 --------------~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 173 (437)
T 3gre_A 108 --------------YDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVR 173 (437)
T ss_dssp --------------EECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEE
T ss_pred --------------ccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceE
Confidence 16889999999999 899999999999999995 444333220 01 4555666
Q ss_pred EE--EecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeec--cccceeEEEEecCCCEEEEEecCCeEEEEec
Q 038568 189 VV--VSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK--HRSTVNALALNGDGSLLFSGGCDRWIVVWER 263 (357)
Q Consensus 189 ~~--~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 263 (357)
+. +++++ .|++++.|+.|++||++ ..+.+..+.. |...|++++|+|++++|++|+.||.|++||+
T Consensus 174 ~~~~~~~~~~~l~~~~~d~~i~iwd~~----------~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 243 (437)
T 3gre_A 174 MRAFVNEEKSLLVALTNLSRVIIFDIR----------TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDI 243 (437)
T ss_dssp EEEEECSSCEEEEEEETTSEEEEEETT----------TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCC----------CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEc
Confidence 66 44666 69999999999999998 4556667776 8899999999999999999999999999999
Q ss_pred ccCCceeeeeecc-CCccceEEEeecC----c--eEEEecCCCeEEEeeCCCCcceeeee--------------------
Q 038568 264 ERDHRMVFAEALW-GHTGALLCLINVG----D--LLASGSADRTVRIWQRGKENCYRCMA-------------------- 316 (357)
Q Consensus 264 ~~~~~~~~~~~~~-~~~~~v~~~~~~~----~--~l~~~~~dg~i~vw~~~~~~~~~~~~-------------------- 316 (357)
++++. ...+. .|...|.++.+.+ + +|++|+.||.|++||+++++....+.
T Consensus 244 ~~~~~---~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 244 RFNVL---IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp TTTEE---EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred CCccE---EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 98663 33332 6778999996554 3 89999999999999999874332222
Q ss_pred -eecC--CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 317 -FLEG--HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 317 -~~~~--h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+.+ |...|++++|+ +++ +|++|+.||.|++||
T Consensus 321 ~~~~~~~~~~~v~~l~~~-~~~-------~l~s~~~d~~i~~wd 356 (437)
T 3gre_A 321 LNFCGIRSLNALSTISVS-NDK-------ILLTDEATSSIVMFS 356 (437)
T ss_dssp CCCCCCCSGGGGCCEEEE-TTE-------EEEEEGGGTEEEEEE
T ss_pred ceecccccCCceEEEEEC-Cce-------EEEecCCCCeEEEEE
Confidence 1122 67789999999 666 999999999999997
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.3e-35 Score=274.93 Aligned_cols=288 Identities=17% Similarity=0.222 Sum_probs=236.4
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--e
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--I 85 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l 85 (357)
..+++.++.+.+ |.++|++++|+ +++|++|+.| .|++||+ .+++.+..+.+ |...|++++|+|++ |
T Consensus 42 ~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~-~~~~~~~~~~~---~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 42 YETQVEVRSIQV-----TETPVRAGKFIARKNWIIVGSDDFRIRVFNY-NTGEKVVDFEA---HPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp TTTTEEEEEEEC-----CSSCEEEEEEEGGGTEEEEEETTSEEEEEET-TTCCEEEEEEC---CSSCEEEEEECSSSSEE
T ss_pred CCCCceEEEEec-----CCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC-CCCcEEEEEec---CCCCEEEEEEeCCCCEE
Confidence 345667777876 99999999999 8999999999 9999999 88899999988 99999999999987 9
Q ss_pred EEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCC
Q 038568 86 FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDR 162 (357)
Q Consensus 86 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg 162 (357)
++++.||.|++||+.++...... +.+|...|.+++|+| ..+++++.||
T Consensus 113 ~~~~~dg~i~vw~~~~~~~~~~~-----------------------------~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 113 LSGSDDLTVKLWNWENNWALEQT-----------------------------FEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp EEEETTSEEEEEEGGGTSEEEEE-----------------------------EECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred EEEcCCCEEEEEECCCCceEEEE-----------------------------EcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999876322211 127889999999998 6899999999
Q ss_pred eEEEEEcCcchhhhhccccccccEEEEEEec--CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeE
Q 038568 163 SFKIWNASNYKCLESVNKAHEDAVNAVVVSD--NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNA 239 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 239 (357)
.|++||+.+++....+...+...+.+++|+| ++ .+++++.||.|++||++ .......+..|...|.+
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~----------~~~~~~~~~~~~~~v~~ 233 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ----------TKSCVATLEGHMSNVSF 233 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT----------TTEEEEEEECCSSCEEE
T ss_pred eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC----------CCcEEEEEcCCCCCEEE
Confidence 9999999988887777445558999999998 77 69999999999999987 45567778889999999
Q ss_pred EEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCccee---
Q 038568 240 LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYR--- 313 (357)
Q Consensus 240 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~--- 313 (357)
++|+|++++|++++.||.|++||+.+++ ....+..|...+.+++|+++ .+++++.++.+.+|++.......
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYK---VEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLD 310 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCS---EEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEEC
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEEC
Confidence 9999999999999999999999999876 44556678889999999877 34555556778888876432110
Q ss_pred ----ee---------------------------------eeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 314 ----CM---------------------------------AFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 314 ----~~---------------------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
.+ ..+..+...+.+++|+|+++ ++++++ ||.+.+|
T Consensus 311 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-------~la~~~-~~~~~i~ 382 (814)
T 3mkq_A 311 PVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGR-------FVTVVG-DGEYVIY 382 (814)
T ss_dssp SSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSS-------EEEEEE-TTEEEEE
T ss_pred CCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCC-------EEEEec-CCEEEEE
Confidence 00 11233555688999999988 888877 8888888
Q ss_pred C
Q 038568 357 D 357 (357)
Q Consensus 357 d 357 (357)
+
T Consensus 383 ~ 383 (814)
T 3mkq_A 383 T 383 (814)
T ss_dssp E
T ss_pred E
Confidence 5
No 87
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-35 Score=254.67 Aligned_cols=280 Identities=14% Similarity=0.129 Sum_probs=217.1
Q ss_pred CccceeEEEEe--cceEEEeeCCceEEEeccCCcc---ccceecccc---------------------------------
Q 038568 28 HHMIISCLAVH--NSLLYAASLNEINVFDLISDYS---HVDTFSNDL--------------------------------- 69 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~---~~~~~~~~~--------------------------------- 69 (357)
...++.+++|+ |++|+++..+.|++||+ .+++ .+..+....
T Consensus 3 ~~~p~~~v~~s~dg~~l~~~~~~~i~v~d~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 3 VIHPLQNLLTSRDGSLVFAIIKNCILSFKY-QSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp EECCCCEEEECSSSSEEEEEETTEEEEEEE-ETTTEEEEEEEEECCC---------------------------------
T ss_pred ccccEEEEEecCCCCEEEEEeCCeEEEEEC-CCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 34579999999 78777665449999999 7777 554444210
Q ss_pred ------------------CCCCceEEEEEecCc--e-EEeecCCeEEEEecC--CccceeeeeecCccccceeeeecCCC
Q 038568 70 ------------------SSSGSVKSITFHITK--I-FTAHQDCKIRVWKIT--ASRQHQLVSTLPTVKDRLIRSVLPNN 126 (357)
Q Consensus 70 ------------------~~~~~v~~l~~~~~~--l-~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (357)
+|...|.+++|+|++ | ++++.||.|++||+. +++....+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------- 146 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF--------------- 146 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE---------------
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc---------------
Confidence 244479999999987 4 889999999999998 66655444321
Q ss_pred eEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhh----hccccccccEEEEEEecC---C-e
Q 038568 127 YVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLE----SVNKAHEDAVNAVVVSDN---G-V 196 (357)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~---~-~ 196 (357)
.|...|.+++|+| .+|++++.+|.|++|++.+++... .+ ..|...|.+++|+|+ + +
T Consensus 147 -------------~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~ 212 (450)
T 2vdu_B 147 -------------CFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQF 212 (450)
T ss_dssp -------------ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEE
T ss_pred -------------cCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcE
Confidence 5668899999999 899999999999999998877554 55 678999999999999 8 6
Q ss_pred EEEEeCCCeEEEEEccccccccccccceeeeeE-eeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeec
Q 038568 197 VYTGSADGRIRVWERSVVDHNKERKSRHMLVTT-LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEAL 275 (357)
Q Consensus 197 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 275 (357)
|++++.|+.|++||++ ....+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++....+...
T Consensus 213 l~s~~~d~~i~vwd~~----------~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 213 IITSDRDEHIKISHYP----------QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp EEEEETTSCEEEEEES----------CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred EEEEcCCCcEEEEECC----------CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 9999999999999997 2233444 55899999999999 9999999999999999999988754443211
Q ss_pred c----------------------CCccceEEEeecCc--eEEEec-CCCeEEEeeC--CCCcceeeeeeecCCcCceEEE
Q 038568 276 W----------------------GHTGALLCLINVGD--LLASGS-ADRTVRIWQR--GKENCYRCMAFLEGHEKPVKSL 328 (357)
Q Consensus 276 ~----------------------~~~~~v~~~~~~~~--~l~~~~-~dg~i~vw~~--~~~~~~~~~~~~~~h~~~v~~~ 328 (357)
. .....+.++.+.++ +|++++ .|+.|++|++ .++.....+..+..| +.|.++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~ 360 (450)
T 2vdu_B 282 SLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISL 360 (450)
T ss_dssp HHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEE
T ss_pred hhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEE
Confidence 0 23356788888865 888887 8999999999 555455677778888 889999
Q ss_pred EEeeCCCCCCCCeEEEEEcCC------CCeEEec
Q 038568 329 VAISSSSSASNGIVSIGSGSL------NGEIKVW 356 (357)
Q Consensus 329 ~~~~~~~~~~~~~~~l~s~~~------dg~v~~w 356 (357)
+|+|++. ++++++. +..|++|
T Consensus 361 ~~~~~~~-------~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 361 SAHNDEF-------QVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp EEETTEE-------EEEECCTTCCSSCCCSEEEE
T ss_pred EecCCcE-------EEEEecccCCCCCCcceEEE
Confidence 9999642 4444443 4557776
No 88
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-37 Score=261.45 Aligned_cols=242 Identities=16% Similarity=0.097 Sum_probs=191.3
Q ss_pred CCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
+.++|++++|+|++ |++++.|+.|++||+.++.. .... .+.+|...|.++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-~~~~---------------------------~~~~h~~~v~~~ 61 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-KHAR---------------------------TFSDHDKIVTCV 61 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE-EECC---------------------------CBCCCSSCEEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce-EEEE---------------------------EEecCCceEEEE
Confidence 67899999999987 88999999999999987621 1111 123899999999
Q ss_pred EEec--CeEEEEecCCeEEEEEcCcch---hhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccccccccc
Q 038568 149 VVKQ--GLMYSVSWDRSFKIWNASNYK---CLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKS 222 (357)
Q Consensus 149 ~~~~--~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~ 222 (357)
+|+| ++|++++.|+.|++||+.+++ ....+ ..|...|.+++|+|++ +|++++.|+.|++||++. ..
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~------~~- 133 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQ------EN- 133 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----------
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEECC------cc-
Confidence 9999 899999999999999999877 44555 6799999999999998 699999999999999972 11
Q ss_pred ceeeeeEeec-cccceeEEEEecCCCEEEEEecCCeEEEEecccCC---------------ceeeeeeccCCccceEEEe
Q 038568 223 RHMLVTTLVK-HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDH---------------RMVFAEALWGHTGALLCLI 286 (357)
Q Consensus 223 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---------------~~~~~~~~~~~~~~v~~~~ 286 (357)
.......+.. |...|.+++|+|++++|++++.|+.|++||++... .......+ +|...|.+++
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 212 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVG 212 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEE
Confidence 1113455666 99999999999999999999999999999986322 11234444 8999999999
Q ss_pred ecCc--eEEEecCCCeEEEeeCCCCcc-eeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 287 NVGD--LLASGSADRTVRIWQRGKENC-YRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 287 ~~~~--~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
|+++ +|++++.||.|++||+++++. ...+..+.+|..+|++++|+|+++ +|++|+.|+.+.+|
T Consensus 213 ~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~~~~~~~~~~~~ 278 (377)
T 3dwl_C 213 FSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-------IVAAGYNYSPILLQ 278 (377)
T ss_dssp ECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-------EEEEESSSSEEEEC
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-------EEEEEcCCcEEEEE
Confidence 9876 899999999999999998743 123677889999999999999998 99999887777444
No 89
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=271.24 Aligned_cols=224 Identities=11% Similarity=0.105 Sum_probs=176.0
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecC--------eEE
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQG--------LMY 156 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------~l~ 156 (357)
|++++.|++|+|||+.+++...... ..+..|.+.|.+++|+|. +|+
T Consensus 176 laS~s~D~tI~iWd~~~~~~~~~~~--------------------------~~l~~~~~~V~~v~wsp~~~~~~~~~~LA 229 (524)
T 2j04_B 176 FDKEKHSSCIQIFKMNTSTLHCVKV--------------------------QTIVHSFGEVWDLKWHEGCHAPHLVGCLS 229 (524)
T ss_dssp ------CEEEEEEEEETTTCCEEEE--------------------------EEEEECCCSEEEEEECSSCCCSSSSCEEE
T ss_pred hccCCCCceEEEEEccCCCCCceEE--------------------------EEEEecCCcEEEEEECCCCCCCCCCceEE
Confidence 4556788999999998765321110 011266788999999973 899
Q ss_pred EEecCCeEEEEEcCcchhh-----------hhccccccccEEEEEEecCCeEEEEeCCCeEEEEEcccccccccccccee
Q 038568 157 SVSWDRSFKIWNASNYKCL-----------ESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHM 225 (357)
Q Consensus 157 ~~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 225 (357)
+++.||+|++||+.+++.. ..+ ..|...|.+++|++++.|++|+.||+|++||++. . ..
T Consensus 230 s~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~------~---~~ 299 (524)
T 2j04_B 230 FVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL-SLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTD------P---EV 299 (524)
T ss_dssp EEETTSCEEEEECCCCSSSSSEEECCCSCSEEE-CCTTTCEEEEEESSSSEEEEEETTSEEEEEETTB------C---SS
T ss_pred EEecCCeEEEEEcCCCccccccceeecCceEEE-EcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCC------C---CC
Confidence 9999999999999876432 234 5688999999999988999999999999999972 1 12
Q ss_pred eeeEeeccccceeEE--EEecCC-CEEEEEecCCeEEEEecccCCceeeeeeccCCc--cceEEEeecCc--eEEEecCC
Q 038568 226 LVTTLVKHRSTVNAL--ALNGDG-SLLFSGGCDRWIVVWERERDHRMVFAEALWGHT--GALLCLINVGD--LLASGSAD 298 (357)
Q Consensus 226 ~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~--~l~~~~~d 298 (357)
+...+.+|...|.++ +|+|++ .+|++|+.|++|++||+++++... .+.+|. ..+.+++|+|+ .+++++.|
T Consensus 300 ~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~~~v~~v~fsp~~~~l~s~~~d 376 (524)
T 2j04_B 300 PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRGSNLVPVVYCPQIYSYIYSDGA 376 (524)
T ss_dssp CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSCCSCCCEEEETTTTEEEEECSS
T ss_pred ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---ccccccccCcccceEeCCCcCeEEEeCCC
Confidence 345578899999999 578887 899999999999999999876432 223343 24777888875 89999999
Q ss_pred CeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 299 RTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 299 g~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++|++||++++ .++..+.+|.+.|++++|+|+++ +|++|+.||+|++||
T Consensus 377 ~tv~lwd~~~~---~~~~~l~gH~~~V~sva~Sp~g~-------~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 377 SSLRAVPSRAA---FAVHPLVSRETTITAIGVSRLHP-------MVLAGSADGSLIITN 425 (524)
T ss_dssp SEEEEEETTCT---TCCEEEEECSSCEEEEECCSSCC-------BCEEEETTTEEECCB
T ss_pred CcEEEEECccc---ccceeeecCCCceEEEEeCCCCC-------eEEEEECCCEEEEEe
Confidence 99999999987 44566778999999999999998 999999999999997
No 90
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-37 Score=259.98 Aligned_cols=260 Identities=8% Similarity=0.016 Sum_probs=204.0
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQ 104 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~ 104 (357)
-...|.+++|+ |+++|+++.| +|+ |. ..++ .+.+ |...|.+++|+|++ .++.+.+|+.+..
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~-~~~~---~l~g---h~~~v~~V~FsPdg-----~~~~~~~~~~~~~-- 77 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QP-KYAK---DINC---NSKNLFHVKEFPLE-----FENKLDFELAQQN-- 77 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EE-CCCS---CCSS---BGGGTEEEEEECCC-----CCCTTTTSCCCSS--
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cc-cccc---eecC---CCccEEEEEECCCC-----CcceEEEEeCCCc--
Confidence 56789999999 9999999999 999 76 5554 4456 99999999999988 4555555543322
Q ss_pred eeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccc
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAH 182 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 182 (357)
..+.. .|...|.+++|+| .+||+++.||.|++||.+. ++..+ . |
T Consensus 78 -~~~~~-----------------------------~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l-~-~ 123 (588)
T 2j04_A 78 -GLLNS-----------------------------QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNL-D-S 123 (588)
T ss_dssp -CSSTT-----------------------------SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEEC-C-C
T ss_pred -eEeec-----------------------------CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeec-c-C
Confidence 21111 4578899999999 8899999999999999654 55555 3 4
Q ss_pred cc-----cEEEEEEecCC-eEEEEeCCCeEEEEEcccccccccccc---ceeeeeEe----eccccceeEEEEecCCCEE
Q 038568 183 ED-----AVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKS---RHMLVTTL----VKHRSTVNALALNGDGSLL 249 (357)
Q Consensus 183 ~~-----~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~----~~~~~~v~~~~~~~~~~~l 249 (357)
.. .+.+++|+|+| +|++|+.||+|++||+. .+.. ..-.+..+ .+|...|.+++|+|+| +
T Consensus 124 ~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~------~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L 195 (588)
T 2j04_A 124 KGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR------KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L 195 (588)
T ss_dssp SSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC------CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E
T ss_pred CCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC------CCccccccceeeeeeecccccccccEEEEEEcCCc--E
Confidence 44 59999999999 59999999999999997 2211 00124444 5677899999999999 8
Q ss_pred EEEecCCeEEEEecccCCceeeeeec-cCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEE
Q 038568 250 FSGGCDRWIVVWERERDHRMVFAEAL-WGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSL 328 (357)
Q Consensus 250 ~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~ 328 (357)
++++.|+.|++||+..+........+ .+|...|.+++|+++.||+++ ++.|++||+.++ +......+|.+.|.++
T Consensus 196 aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~---~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 196 VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNY---SISSLKTGSLENFHII 271 (588)
T ss_dssp EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTT---EEEEEECSCCSCCCEE
T ss_pred EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCC---eEEEEEcCCCceEEEE
Confidence 88899999999999877632222344 378889999999977899887 699999999986 3323333899999999
Q ss_pred EE--eeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 329 VA--ISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 329 ~~--~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+| +|++. .|++++.||+ ++|.
T Consensus 272 a~~~s~d~~-------~La~a~edG~-klw~ 294 (588)
T 2j04_A 272 PLNHEKEST-------ILLMSNKTSY-KVLL 294 (588)
T ss_dssp EETTCSSCE-------EEEECSSCEE-EEEE
T ss_pred EeeeCCCCC-------EEEEEcCCCC-EEEe
Confidence 99 99987 9999999999 8884
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=9.1e-36 Score=248.16 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=204.7
Q ss_pred CCccccceeccccCCCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecc
Q 038568 57 SDYSHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRH 133 (357)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (357)
++.+...+|++ |.+.|++|+|+|+. |+||+.|++|++||+.+.+.......
T Consensus 26 ~~~~l~~tL~G---H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~----------------------- 79 (340)
T 4aow_A 26 EQMTLRGTLKG---HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ----------------------- 79 (340)
T ss_dssp CEEEEEEEECC---CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEE-----------------------
T ss_pred CceEEEEEECC---ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceee-----------------------
Confidence 44556678888 99999999999863 89999999999999987653221110
Q ss_pred cccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEE
Q 038568 134 KKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWE 210 (357)
Q Consensus 134 ~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d 210 (357)
..+.+|...|.+++|+| .+|++++.|+.|++|+.......... ..+...+..+.+++++ .|++++.|+.+++||
T Consensus 80 --~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d 156 (340)
T 4aow_A 80 --RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 156 (340)
T ss_dssp --EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --EEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeee-cCCCCceeEEEEeecCccceeecCCCeEEEEE
Confidence 12238999999999999 89999999999999999988777766 6777888899999988 699999999999999
Q ss_pred ccccccccccccceeeeeEeeccccceeEEEEecCC--CEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeec
Q 038568 211 RSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG--SLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288 (357)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 288 (357)
+. ..........+|...+..++|++++ .++++++.|+.|++||+++.+ ....+.+|...|.+++|+
T Consensus 157 ~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s 224 (340)
T 4aow_A 157 TL---------GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVS 224 (340)
T ss_dssp TT---------SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEEC
T ss_pred eC---------CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEEC
Confidence 86 1233445566789999999998854 578899999999999999876 455677899999999998
Q ss_pred Cc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 289 GD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 289 ~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++ +|++|+.||.|++||+++. +.+..+.. ...|.++.|+|++. +++++.|+.|++||
T Consensus 225 ~~~~~l~s~s~Dg~i~iwd~~~~---~~~~~~~~-~~~v~~~~~~~~~~--------~~~~~~d~~i~iwd 283 (340)
T 4aow_A 225 PDGSLCASGGKDGQAMLWDLNEG---KHLYTLDG-GDIINALCFSPNRY--------WLCAATGPSIKIWD 283 (340)
T ss_dssp TTSSEEEEEETTCEEEEEETTTT---EEEEEEEC-SSCEEEEEECSSSS--------EEEEEETTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEeccC---ceeeeecC-CceEEeeecCCCCc--------eeeccCCCEEEEEE
Confidence 76 9999999999999999987 55566654 46899999999875 56677899999996
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-35 Score=252.20 Aligned_cols=237 Identities=17% Similarity=0.241 Sum_probs=202.1
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQ 104 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~ 104 (357)
|...|++++|+ +++|++|+.| .|++||+ .+++.+..+.+ |...|.+++|+++.|++++.||.|++||++....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 208 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDV-ESQTKLRTMAG---HQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH 208 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEET-TTCCEEEEECC---CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEEC-cCCeEEEEecC---CCCceEEEEECCCEEEEEcCCCCEEEEecccCcc
Confidence 78999999999 8999999999 9999999 88888999987 9999999999888899999999999999985432
Q ss_pred eeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccc
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAH 182 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 182 (357)
.. .. +.+|...|.+++|+| .+|++++.||.|++||+++++.+..+ ..|
T Consensus 209 ~~--~~---------------------------~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-~~~ 258 (401)
T 4aez_A 209 QI--GT---------------------------LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK-TNH 258 (401)
T ss_dssp EE--EE---------------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE-CCC
T ss_pred ee--eE---------------------------EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe-cCC
Confidence 11 11 127899999999999 89999999999999999998888887 789
Q ss_pred cccEEEEEEecCC--eEEEEe--CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEE--EecCC
Q 038568 183 EDAVNAVVVSDNG--VVYTGS--ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS--GGCDR 256 (357)
Q Consensus 183 ~~~v~~~~~~~~~--~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg 256 (357)
...|.+++|+|++ .+++++ .|+.|++||++ .......+. +...|.+++|+|+++++++ |+.||
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~----------~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA----------TGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT----------TCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred cceEEEEEECCCCCCEEEEecCCCCCEEEEEECC----------CCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCC
Confidence 9999999999977 366654 79999999997 334444454 6678999999999999999 44899
Q ss_pred eEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc
Q 038568 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 257 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~ 310 (357)
.|++||+.++... ....+.+|...|.+++|+++ +|++++.||.|++|++.+++
T Consensus 328 ~i~v~~~~~~~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 328 NLSIWSYSSSGLT-KQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEEETTEEE-EEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred cEEEEecCCccce-eEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999999876533 33456789999999999876 99999999999999999874
No 93
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-35 Score=251.01 Aligned_cols=242 Identities=16% Similarity=0.134 Sum_probs=199.0
Q ss_pred CCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
|..+|++++|+|++ |++++.|+.|++||+.+++. ..+..+ .+|...|.++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~---------------------------~~h~~~v~~~ 58 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-VQVHEL---------------------------KEHNGQVTGV 58 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-EEEEEE---------------------------ECCSSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE-Eeeeee---------------------------cCCCCcccEE
Confidence 89999999999987 88999999999999987751 112111 2788999999
Q ss_pred EEec--CeEEEEecCCeEEEEEcCcchhhhhcc-ccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccce
Q 038568 149 VVKQ--GLMYSVSWDRSFKIWNASNYKCLESVN-KAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRH 224 (357)
Q Consensus 149 ~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 224 (357)
+|+| ++|++++.||.|++||+++++....+. ..|...+.+++|+|++ +|++++.|+.|++||++ ......
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~------~~~~~~ 132 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE------QENDWW 132 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEE------TTTTEE
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEec------CCCcce
Confidence 9999 899999999999999998876443321 5688899999999998 69999999999999998 222111
Q ss_pred eeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccC---------------CceeeeeeccCCccceEEEeecC
Q 038568 225 MLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERD---------------HRMVFAEALWGHTGALLCLINVG 289 (357)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~ 289 (357)
........|...|.+++|+|++++|++++.||.|++||++.. ........+.+|...+.++.|++
T Consensus 133 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 133 VCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp EEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred eeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 223334568899999999999999999999999999996421 01124556668999999999987
Q ss_pred c--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 290 D--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 290 ~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+ +|++++.||.|++||++++ +.+..+..|..+|++++|+|++. +|++| .||.|++||
T Consensus 213 ~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~-~d~~i~i~~ 271 (372)
T 1k8k_C 213 NGSRVAWVSHDSTVCLADADKK---MAVATLASETLPLLAVTFITESS-------LVAAG-HDCFPVLFT 271 (372)
T ss_dssp SSSEEEEEETTTEEEEEEGGGT---TEEEEEECSSCCEEEEEEEETTE-------EEEEE-TTSSCEEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCC---ceeEEEccCCCCeEEEEEecCCC-------EEEEE-eCCeEEEEE
Confidence 6 9999999999999999987 56777889999999999999997 78777 899999996
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.1e-36 Score=254.61 Aligned_cols=254 Identities=12% Similarity=0.137 Sum_probs=200.0
Q ss_pred cceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccc
Q 038568 62 VDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEH 141 (357)
Q Consensus 62 ~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
...+.+ |.+.|++++|+|+.|++++.||.|++||+.+++........ ..+.+|
T Consensus 9 ~~~~~~---h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~------------------------~~~~~h 61 (397)
T 1sq9_A 9 ANAGKA---HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKS------------------------YSHFVH 61 (397)
T ss_dssp EEESSC---SSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGE------------------------EEEECC
T ss_pred hhhhhh---hhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcc------------------------eEEecC
Confidence 345566 99999999999977999999999999999887621110000 111278
Q ss_pred cccEEEEEEec---------CeEEEEecCCeEEEEEcCcchh-----hhhccccc-----cccEEEEEEe----cCC-e-
Q 038568 142 WDAVSDLVVKQ---------GLMYSVSWDRSFKIWNASNYKC-----LESVNKAH-----EDAVNAVVVS----DNG-V- 196 (357)
Q Consensus 142 ~~~v~~~~~~~---------~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~-----~~~v~~~~~~----~~~-~- 196 (357)
...|.+++|++ .+|++++.||.|++||+.+++. +..+ ..| ...|.+++|+ |++ .
T Consensus 62 ~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 62 KSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp TTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred CCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee-cccccccCCCcEEEEEEeeccCCCCceE
Confidence 89999999986 4799999999999999998887 6666 566 5899999999 888 6
Q ss_pred EEEEeCCCeEEEEEccccccccccccc-eeeeeEe-------eccccceeEEEEecCCCEEEEEecCCeEEEEecccCCc
Q 038568 197 VYTGSADGRIRVWERSVVDHNKERKSR-HMLVTTL-------VKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHR 268 (357)
Q Consensus 197 l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 268 (357)
|++++.||.|++||++........... ..+...+ ..|...|.+++|+|++ +|++++.||.|++||+++.+.
T Consensus 141 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~ 219 (397)
T 1sq9_A 141 LVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRP 219 (397)
T ss_dssp EEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEE
T ss_pred EEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCce
Confidence 899999999999999831000001111 1111134 4478899999999999 999999999999999998764
Q ss_pred eeeeeeccC---C---ccceEEEeecCc--eEEEecCC---CeEEEeeCCCCcceeeeeeecC-------------CcCc
Q 038568 269 MVFAEALWG---H---TGALLCLINVGD--LLASGSAD---RTVRIWQRGKENCYRCMAFLEG-------------HEKP 324 (357)
Q Consensus 269 ~~~~~~~~~---~---~~~v~~~~~~~~--~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~-------------h~~~ 324 (357)
. ..+.. | ...+.+++|+++ +|++++.| |.|++||++++ +.+..+.+ |...
T Consensus 220 ~---~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (397)
T 1sq9_A 220 L---YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG---ERIGSLSVPTHSSQASLGEFAHSSW 293 (397)
T ss_dssp E---EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC---CEEEEECBC--------CCBSBSSC
T ss_pred e---EEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC---cccceeccCcccccccccccccCCc
Confidence 3 44445 8 899999999876 99999999 99999999987 56677777 9999
Q ss_pred eEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 325 VKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 325 v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++++|+|+++ +|++++.||.|++||
T Consensus 294 v~~~~~~~~~~-------~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 294 VMSLSFNDSGE-------TLCSAGWDGKLRFWD 319 (397)
T ss_dssp EEEEEECSSSS-------EEEEEETTSEEEEEE
T ss_pred EEEEEECCCCC-------EEEEEeCCCeEEEEE
Confidence 99999999998 999999999999997
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.4e-36 Score=252.22 Aligned_cols=252 Identities=14% Similarity=0.157 Sum_probs=197.9
Q ss_pred EEeccCCccccceeccccCCCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeE
Q 038568 52 VFDLISDYSHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYV 128 (357)
Q Consensus 52 iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (357)
+|+. ...+....+.+ |...|++++|+|++ |++++.||.|++||+.+++....+..
T Consensus 57 ~~~~-~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------------------ 114 (383)
T 3ei3_B 57 IRSL-KSYKLHRTASP---FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG------------------ 114 (383)
T ss_dssp HHHH-TTCEEEEEECC---CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC------------------
T ss_pred cccc-cccceEEeccC---CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec------------------
Confidence 4444 45556667776 99999999999975 99999999999999998765544321
Q ss_pred EEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhcc--ccccccEEEEEEecCC-eEEEEeC
Q 038568 129 TVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVN--KAHEDAVNAVVVSDNG-VVYTGSA 202 (357)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~-~l~~~~~ 202 (357)
.+|...|.+++|+| .+|++++.|+.|++||+++ +.+..+. ..+...+.+++|+|++ .|++++.
T Consensus 115 ----------~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 115 ----------MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp ----------CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEET
T ss_pred ----------CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECC
Confidence 16899999999998 7999999999999999985 4444441 2344789999999998 6999999
Q ss_pred CCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCC-EEEEEecCCeEEEEecccCCcee-eeeeccCCcc
Q 038568 203 DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGS-LLFSGGCDRWIVVWERERDHRMV-FAEALWGHTG 280 (357)
Q Consensus 203 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~ 280 (357)
|+.|++||++ ...+..+..|...|.+++|+|+++ +|++++.|+.|++||+++.+... ....+ +|..
T Consensus 184 d~~i~i~d~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~ 251 (383)
T 3ei3_B 184 TGRLLLLGLD-----------GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK 251 (383)
T ss_dssp TSEEEEEETT-----------SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS
T ss_pred CCCEEEEECC-----------CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC
Confidence 9999999985 345677788999999999999998 99999999999999999743211 22223 6899
Q ss_pred ceEEEeecC-c--eEEEecCCCeEEEeeCCCCcceeeeeee----cCCc----------CceEEEEEeeCCCCCCCCeEE
Q 038568 281 ALLCLINVG-D--LLASGSADRTVRIWQRGKENCYRCMAFL----EGHE----------KPVKSLVAISSSSSASNGIVS 343 (357)
Q Consensus 281 ~v~~~~~~~-~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~h~----------~~v~~~~~~~~~~~~~~~~~~ 343 (357)
.+.+++|++ + +|++++.|+.|++||+++++....+... ..|. ..+..++|+|++. +
T Consensus 252 ~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-------~ 324 (383)
T 3ei3_B 252 PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-------L 324 (383)
T ss_dssp CEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-------T
T ss_pred ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc-------c
Confidence 999999988 4 9999999999999999987433322211 1222 3344566777775 4
Q ss_pred EEEcCCCCeEEecC
Q 038568 344 IGSGSLNGEIKVWD 357 (357)
Q Consensus 344 l~s~~~dg~v~~wd 357 (357)
+++.||.|++||
T Consensus 325 --s~s~d~~i~iwd 336 (383)
T 3ei3_B 325 --LLNDKRTIDIYD 336 (383)
T ss_dssp --CTTCCCCEEEEE
T ss_pred --ccCCCCeEEEEe
Confidence 888999999997
No 96
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-35 Score=268.35 Aligned_cols=244 Identities=23% Similarity=0.356 Sum_probs=197.9
Q ss_pred eecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH 89 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~ 89 (357)
.+.+.+.+ |...|++++|+ +++|++|+.| .|+|||+ .+++.+..+.+ |...|.+++|+|++ |++++
T Consensus 421 ~~~~~~~~-----h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~-~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s 491 (694)
T 3dm0_A 421 VAQRRLTG-----HSHFVEDVVLSSDGQFALSGSWDGELRLWDL-AAGVSTRRFVG---HTKDVLSVAFSLDNRQIVSAS 491 (694)
T ss_dssp EEEEEEEC-----CSSCEEEEEECTTSSEEEEEETTSEEEEEET-TTTEEEEEEEC---CSSCEEEEEECTTSSCEEEEE
T ss_pred cccceecC-----CCCcEEEEEECCCCCEEEEEeCCCcEEEEEC-CCCcceeEEeC---CCCCEEEEEEeCCCCEEEEEe
Confidence 34556665 99999999999 8999999999 9999999 88888899988 99999999999987 99999
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEE
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFK 165 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~ 165 (357)
.|++|++||............ ..+|...|.+++|+| ..+++++.|++|+
T Consensus 492 ~D~~i~iwd~~~~~~~~~~~~---------------------------~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 492 RDRTIKLWNTLGECKYTISEG---------------------------GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp TTSCEEEECTTSCEEEEECSS---------------------------TTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred CCCEEEEEECCCCcceeeccC---------------------------CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 999999999865432211111 127889999999999 3799999999999
Q ss_pred EEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec
Q 038568 166 IWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG 244 (357)
Q Consensus 166 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 244 (357)
+||+++++....+ ..|...|.+++|+|++ +|++++.|+.|++||++ ..+.+..+. +...|.+++|+|
T Consensus 545 vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~----------~~~~~~~~~-~~~~v~~~~~sp 612 (694)
T 3dm0_A 545 VWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA----------EGKKLYSLE-ANSVIHALCFSP 612 (694)
T ss_dssp EEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT----------TTEEEECCB-CSSCEEEEEECS
T ss_pred EEECCCCcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC----------CCceEEEec-CCCcEEEEEEcC
Confidence 9999998888888 8899999999999998 69999999999999998 333444443 456799999999
Q ss_pred CCCEEEEEecCCeEEEEecccCCceeeeeec----------------cCCccceEEEeecCc--eEEEecCCCeEEEeeC
Q 038568 245 DGSLLFSGGCDRWIVVWERERDHRMVFAEAL----------------WGHTGALLCLINVGD--LLASGSADRTVRIWQR 306 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----------------~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~ 306 (357)
++.+|++++ ++.|++||++++.....+... ..+...+.+++|+++ +|++|+.||.|++|++
T Consensus 613 ~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 613 NRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 998877765 566999999987644322110 011223678888876 9999999999999998
Q ss_pred C
Q 038568 307 G 307 (357)
Q Consensus 307 ~ 307 (357)
.
T Consensus 692 ~ 692 (694)
T 3dm0_A 692 G 692 (694)
T ss_dssp -
T ss_pred c
Confidence 6
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.9e-34 Score=246.94 Aligned_cols=247 Identities=21% Similarity=0.292 Sum_probs=205.5
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEe
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTA 88 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~ 88 (357)
.++++.+.++ +.+ |...|++|+|+ |++||+|+.| .|+|||+ ++++.+..+.+ |...+.++++++..|++|
T Consensus 133 ~tg~~~~~~~-~~~--~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~-~~~~~~~~~~~---h~~~v~~~s~~~~~l~sg 205 (420)
T 4gga_A 133 SSGDILQLLQ-MEQ--PGEYISSVAWIKEGNYLAVGTSSAEVQLWDV-QQQKRLRNMTS---HSARVGSLSWNSYILSSG 205 (420)
T ss_dssp TTCCEEEEEE-CCS--TTCCEEEEEECTTSSEEEEEETTSCEEEEET-TTTEEEEEECC---CSSCEEEEEEETTEEEEE
T ss_pred CCCCEEEEEE-ecC--CCCcEEEEEECCCCCEEEEEECCCeEEEEEc-CCCcEEEEEeC---CCCceEEEeeCCCEEEEE
Confidence 3455555554 123 88999999999 9999999999 9999999 89999999998 999999999998889999
Q ss_pred ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEE
Q 038568 89 HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKI 166 (357)
Q Consensus 89 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i 166 (357)
+.|+.+++||........ .. +.+|...+..+.+.+ .++++++.|+.+++
T Consensus 206 s~d~~i~~~d~~~~~~~~--~~---------------------------~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i 256 (420)
T 4gga_A 206 SRSGHIHHHDVRVAEHHV--AT---------------------------LSGHSQEVCGLRWAPDGRHLASGGNDNLVNV 256 (420)
T ss_dssp ETTSEEEEEETTSSSCEE--EE---------------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eCCCceeEeeecccceee--EE---------------------------ecccccceeeeeecCCCCeeeeeeccccceE
Confidence 999999999988654322 11 128899999999999 89999999999999
Q ss_pred EEcCcchh----hhhccccccccEEEEEEecCC--eEEE--EeCCCeEEEEEccccccccccccceeeeeEeecccccee
Q 038568 167 WNASNYKC----LESVNKAHEDAVNAVVVSDNG--VVYT--GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN 238 (357)
Q Consensus 167 wd~~~~~~----~~~~~~~~~~~v~~~~~~~~~--~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (357)
||..+++. +... ..|...|.+++|+|.+ .+++ |+.|+.|++||++ .......+. +...+.
T Consensus 257 ~~~~~~~~~~~~~~~~-~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~----------t~~~~~~~~-~~~~v~ 324 (420)
T 4gga_A 257 WPSAPGEGGWVPLQTF-TQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC----------SGACLSAVD-AHSQVC 324 (420)
T ss_dssp EESSCCSSCSCCSEEE-CCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT----------TTEEEEEEE-CSSCEE
T ss_pred Eeeccccccceeeeee-cccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC----------ccccceeec-ccccee
Confidence 99987653 2333 6788999999999977 3444 4579999999998 344555555 446788
Q ss_pred EEEEecCCCEEEEEe--cCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 239 ALALNGDGSLLFSGG--CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 239 ~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
++.|+|+++.+++++ .|+.|+|||+.+++ .+..+.+|...|++++|+|+ +|++|+.|++|++||+.+.
T Consensus 325 ~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~---~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred eeeecCCCCeEEEEEecCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999888765 79999999999887 45677899999999999876 9999999999999999865
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.1e-36 Score=256.88 Aligned_cols=201 Identities=13% Similarity=0.168 Sum_probs=166.6
Q ss_pred CCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEE
Q 038568 71 SSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD 147 (357)
Q Consensus 71 ~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (357)
|...|++|+|+|.. |++|+.||+|+|||+.+++....+.. .+|.+.|++
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~----------------------------~gH~~~V~~ 169 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG----------------------------IGAGGSITG 169 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC----------------------------CSSSCCCCE
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc----------------------------cCCCCCEEE
Confidence 88999999999843 99999999999999987764433321 289999999
Q ss_pred EEEec---CeEEEEecCCeEEEEEcCcchhhhhcc-ccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccccccccc
Q 038568 148 LVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVN-KAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKS 222 (357)
Q Consensus 148 ~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~ 222 (357)
++|+| ++|++++.||+|++||++++....... ..+...+.+++|+|++ +|++|+.||.|++||++
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~---------- 239 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD---------- 239 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS----------
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC----------
Confidence 99997 699999999999999998654322220 2334567899999998 69999999999999986
Q ss_pred ceeeeeEeeccccceeEEEEecCCC-EEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCC
Q 038568 223 RHMLVTTLVKHRSTVNALALNGDGS-LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADR 299 (357)
Q Consensus 223 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg 299 (357)
...+..+.+|...|.+++|+|++. +|++|+.|+.|++||+++.+.........+|...|.+++|+++ +|++++.||
T Consensus 240 -~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~ 318 (435)
T 4e54_B 240 -GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS 318 (435)
T ss_dssp -SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS
T ss_pred -cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC
Confidence 234556788999999999999876 7889999999999999987655455556689999999999876 999999999
Q ss_pred eEEEeeCCCCc
Q 038568 300 TVRIWQRGKEN 310 (357)
Q Consensus 300 ~i~vw~~~~~~ 310 (357)
.|++||+.+++
T Consensus 319 ~i~iwd~~~~~ 329 (435)
T 4e54_B 319 EIRVYSASQWD 329 (435)
T ss_dssp CEEEEESSSSS
T ss_pred EEEEEECCCCc
Confidence 99999999874
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-36 Score=272.85 Aligned_cols=243 Identities=20% Similarity=0.260 Sum_probs=203.5
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccC--CccccceeccccCCCCceEEEEEecC--c--eEEeecCCeEEEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLIS--DYSHVDTFSNDLSSSGSVKSITFHIT--K--IFTAHQDCKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~--~~~~~~~~~~~~~~~~~v~~l~~~~~--~--l~~~~~d~~i~vwd 98 (357)
|.+.|++++|+ +++|++|+.| .|+|||+ . +++.+..+.+ |.++|++++|+|+ + |++++.||.|++||
T Consensus 8 H~~~V~~l~~s~dg~~latg~~dg~I~vwd~-~~~~~~~~~~l~~---h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSDKTIKIFEV-EGETHKLIDTLTG---HEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETTTEEEEEEE-ETTEEEEEEEECC---CSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred CcceeEEEEECCCCCeEEEEECCCcEEEEec-CCCCCccceeccC---CcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 99999999999 8999999999 9999999 6 5567778887 9999999999876 4 99999999999999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEEEEcCcchh
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKC 174 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~ 174 (357)
+.+++... .... ..|...|.+++|+| ..+++|+.||.|++||++++..
T Consensus 84 ~~~~~~~~-~~~~---------------------------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~ 135 (753)
T 3jro_A 84 EENGRWSQ-IAVH---------------------------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 135 (753)
T ss_dssp EETTEEEE-EEEE---------------------------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC
T ss_pred CCCCcccc-cccc---------------------------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC
Confidence 98765221 1111 27899999999998 5899999999999999988743
Q ss_pred h--hhccccccccEEEEEEecC-------------C-eEEEEeCCCeEEEEEccccccccccccceeeeeEeecccccee
Q 038568 175 L--ESVNKAHEDAVNAVVVSDN-------------G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN 238 (357)
Q Consensus 175 ~--~~~~~~~~~~v~~~~~~~~-------------~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (357)
. ..+ ..|...|.+++|+|. + .+++|+.||.|++||++ ...........+.+|..+|+
T Consensus 136 ~~~~~~-~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~------~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 136 TSPIII-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN------SDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp CCCEEE-ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE------TTTTEEEEEEEECCCSSCEE
T ss_pred cceeEe-ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc------CCcccceeeeeecCCCCcEE
Confidence 2 233 678899999999993 5 69999999999999998 33334466778889999999
Q ss_pred EEEEecC---CCEEEEEecCCeEEEEecccCCcee--eeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 239 ALALNGD---GSLLFSGGCDRWIVVWERERDHRMV--FAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 239 ~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
+++|+|+ +++|++++.||.|++||++++.... .......|...+.+++|+++ +|++++.||.|++|++..+
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 9999999 8999999999999999998764221 22334458888998998876 9999999999999999853
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-36 Score=249.39 Aligned_cols=266 Identities=9% Similarity=0.022 Sum_probs=195.6
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccc
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDR 117 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 117 (357)
+++|++|+.| .|++||+ .+++.+..+. ...|.++.|+|+ +++++.|++|++|+..............
T Consensus 48 ~~~l~sg~~Dg~v~iwd~-~~~~~~~~~~-----~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~----- 115 (343)
T 3lrv_A 48 KWVCMCRCEDGALHFTQL-KDSKTITTIT-----TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNK----- 115 (343)
T ss_dssp EEEEEEEEETTEEEEEEE-SSSSCEEEEE-----EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCC-----
T ss_pred CCEEEEECCCCcEEEEEC-CCCcEEEEEe-----cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcc-----
Confidence 8899999999 9999999 8888877775 356778889998 9999999999999887432111000000
Q ss_pred eeeeecCCCeEEEecccccccccccccEEEEEEec----CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEec
Q 038568 118 LIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD 193 (357)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (357)
.+. .....|...|.+++|+| +++++++.||.|++||+++++.+......+...+.+++|+|
T Consensus 116 -----------~~~----~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 116 -----------VLR----EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK 180 (343)
T ss_dssp -----------EEE----EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT
T ss_pred -----------eeE----EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC
Confidence 000 00125668899999988 68999999999999999998886655345666899999999
Q ss_pred CC-eEEEEeCCCeEEEEEccccccccccccceeee-eEeec-cccceeEEEEecCCCEEEEEecCCeEEEEecccCCcee
Q 038568 194 NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLV-TTLVK-HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMV 270 (357)
Q Consensus 194 ~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 270 (357)
++ +|++|+.||.|++||++ ..... ..+.. |..+|++++|+|++.+|++++ |+.|++||+++.+...
T Consensus 181 dg~~lasg~~dg~i~iwd~~----------~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 181 DSLLLALYSPDGILDVYNLS----------SPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL 249 (343)
T ss_dssp TSCEEEEECTTSCEEEEESS----------CTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB
T ss_pred CCCEEEEEcCCCEEEEEECC----------CCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce
Confidence 99 58889999999999998 22233 45566 999999999999999999999 5599999999887544
Q ss_pred eeeeccCCccceE--EEeecCc--eEEEecC-CCeEEEeeCCCCcceeeeeeecCCcCceEEEEEee---CCCCCCCCeE
Q 038568 271 FAEALWGHTGALL--CLINVGD--LLASGSA-DRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAIS---SSSSASNGIV 342 (357)
Q Consensus 271 ~~~~~~~~~~~v~--~~~~~~~--~l~~~~~-dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~ 342 (357)
.+..+..|...+. +++|+++ +|++++. |+.|++|++.+.... ... .++..+.|.+ +..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~------- 315 (343)
T 3lrv_A 250 AYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKN--WTK-----DEESALCLQSDTADFT------- 315 (343)
T ss_dssp SSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCS--EEE-----EEEEECCC----CCCC-------
T ss_pred eecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccc--eEe-----cCceeEecCccccccc-------
Confidence 4444333444443 5777765 8999888 999999999765211 111 4567777777 555
Q ss_pred EEEEcCCCCeEEec
Q 038568 343 SIGSGSLNGEIKVW 356 (357)
Q Consensus 343 ~l~s~~~dg~v~~w 356 (357)
.+++++.||.++++
T Consensus 316 ~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 316 DMDVVCGDGGIAAI 329 (343)
T ss_dssp EEEEEEETTEEEEE
T ss_pred eeEEEecCCceEEE
Confidence 77777777777664
No 101
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1e-34 Score=243.49 Aligned_cols=241 Identities=10% Similarity=0.099 Sum_probs=185.5
Q ss_pred CccceeEEEEecceEEEe-----------eCC-ceEEEeccCCcc-ccceec-----cccCCCCceEEEEEecCc--eE-
Q 038568 28 HHMIISCLAVHNSLLYAA-----------SLN-EINVFDLISDYS-HVDTFS-----NDLSSSGSVKSITFHITK--IF- 86 (357)
Q Consensus 28 h~~~i~~~~~s~~~l~t~-----------~~d-~i~iw~~~~~~~-~~~~~~-----~~~~~~~~v~~l~~~~~~--l~- 86 (357)
|...|.+++++++.+++| +.| .+++|++ .... .+.... ....+...+.+++|+||+ ++
T Consensus 72 ~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~ 150 (365)
T 4h5i_A 72 NDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKY-DKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAI 150 (365)
T ss_dssp TSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEE-ETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEE
T ss_pred CCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEe-cCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEE
Confidence 899999999997777765 356 8999998 4432 221111 111255679999999997 44
Q ss_pred -EeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCe
Q 038568 87 -TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRS 163 (357)
Q Consensus 87 -~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~ 163 (357)
+++.|++|++||+.+++....+ .|...|.+++|+| +++++++. +.
T Consensus 151 as~~~d~~i~iwd~~~~~~~~~~-------------------------------~~~~~V~~v~fspdg~~l~s~s~-~~ 198 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSDLTEKFEI-------------------------------ETRGEVKDLHFSTDGKVVAYITG-SS 198 (365)
T ss_dssp EESCSSCEEEEEETTTTEEEEEE-------------------------------ECSSCCCEEEECTTSSEEEEECS-SC
T ss_pred EECCCCCEEEEeECCCCcEEEEe-------------------------------CCCCceEEEEEccCCceEEeccc-ee
Confidence 5557999999999987654433 5667899999999 67777774 55
Q ss_pred EEEEEcCcchhhhh-ccccccccEEEEEEecCC-eEEEEeCCC----eEEEEEccccccccccccceeeeeEeeccccce
Q 038568 164 FKIWNASNYKCLES-VNKAHEDAVNAVVVSDNG-VVYTGSADG----RIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV 237 (357)
Q Consensus 164 i~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (357)
+.+|+..+++.+.. ....|...+.+++|+|++ .+++++.|+ .+++|++. ...........+.+|..+|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~V 272 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK------SGNTSVLRSKQVTNRFKGI 272 (365)
T ss_dssp EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE------TTEEEEEEEEEEESSCSCE
T ss_pred EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc------cceecceeeeeecCCCCCe
Confidence 77777776665432 225688899999999999 588888777 68888876 3222333456677899999
Q ss_pred eEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 238 NALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 238 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
++++|+|+|++|++|+.|+.|+|||+++++.+ ...+.+|...|++++|+|+ +|++|+.|++|+||++...
T Consensus 273 ~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~--~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASNDNSIALVKLKDLSMS--KIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTTEEE--EEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EeEEECCCCCceEEEcCCCEEEEEECCCCcEE--EEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999999999999999987632 2235789999999999987 9999999999999999653
No 102
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=4.9e-35 Score=251.22 Aligned_cols=251 Identities=17% Similarity=0.219 Sum_probs=199.2
Q ss_pred CCCceEEEEEecC-c--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEE
Q 038568 71 SSGSVKSITFHIT-K--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD 147 (357)
Q Consensus 71 ~~~~v~~l~~~~~-~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (357)
|.+.|++++|+|+ . |++++.||.|++|++.......... . .......+.+|...|.+
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~--~------------------~~~~~~~~~~h~~~v~~ 186 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPS--G------------------ECQPDLRLRGHQKEGYG 186 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTT--C------------------CCCCSEEEECCSSCCCC
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCcc--c------------------cCCCcEEecCCCCCeEE
Confidence 9999999999997 3 9999999999999997631100000 0 00000122388999999
Q ss_pred EEEec--C-eEEEEecCCeEEEEEcCcchh-------hhhccccccccEEEEEEecC-C-eEEEEeCCCeEEEEEccccc
Q 038568 148 LVVKQ--G-LMYSVSWDRSFKIWNASNYKC-------LESVNKAHEDAVNAVVVSDN-G-VVYTGSADGRIRVWERSVVD 215 (357)
Q Consensus 148 ~~~~~--~-~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~d~~i~i~d~~~~~ 215 (357)
++|+| . +|++|+.||.|++||+.++.. ...+ ..|...|.+++|+|+ + .|++++.|+.|++||++..
T Consensus 187 l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~- 264 (430)
T 2xyi_A 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIF-TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN- 264 (430)
T ss_dssp EEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE-CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS-
T ss_pred EEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceee-cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC-
Confidence 99999 4 899999999999999987432 2333 578899999999994 4 6889999999999999821
Q ss_pred cccccccceeeeeEeeccccceeEEEEecCCC-EEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---e
Q 038568 216 HNKERKSRHMLVTTLVKHRSTVNALALNGDGS-LLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---L 291 (357)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~ 291 (357)
. .......+..|...|++++|+|++. +|++|+.||.|++||+++... ....+.+|...|.++.|+++ +
T Consensus 265 -----~-~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~--~~~~~~~h~~~v~~i~~sp~~~~~ 336 (430)
T 2xyi_A 265 -----N-TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL--KLHSFESHKDEIFQVQWSPHNETI 336 (430)
T ss_dssp -----C-SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEECCSSCEEEEEECSSCTTE
T ss_pred -----C-CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC--CeEEeecCCCCEEEEEECCCCCCE
Confidence 1 1235556678999999999999887 688999999999999997543 34566679999999999875 6
Q ss_pred EEEecCCCeEEEeeCCCCcc-----------eeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 292 LASGSADRTVRIWQRGKENC-----------YRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 292 l~~~~~dg~i~vw~~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
|++++.||.|++||+..... .+.+..+.+|...|++++|+|+++ .+|++++.||.|++|+
T Consensus 337 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~------~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 337 LASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP------WIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST------TEEEEEETTSEEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCC------CEEEEEECCCCEEEeE
Confidence 99999999999999987321 256777889999999999999986 3799999999999996
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=6.7e-35 Score=244.52 Aligned_cols=245 Identities=15% Similarity=0.162 Sum_probs=197.0
Q ss_pred CccceeEEEEe-c----ceEEEeeCC-ceEEEeccCCcc-ccceeccccCCCCceEEEEEe------cCc--eEEeecCC
Q 038568 28 HHMIISCLAVH-N----SLLYAASLN-EINVFDLISDYS-HVDTFSNDLSSSGSVKSITFH------ITK--IFTAHQDC 92 (357)
Q Consensus 28 h~~~i~~~~~s-~----~~l~t~~~d-~i~iw~~~~~~~-~~~~~~~~~~~~~~v~~l~~~------~~~--l~~~~~d~ 92 (357)
|...|++++|+ . ++|++|+.| .|++||+ .+++ .+..+.+ |...|.+++|. |++ |++++.|+
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~---~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~ 139 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNL-EAPEMPVYSVKG---HKEIINAIDGIGGLGIGEGAPEIVTGSRDG 139 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECT-TSCSSCSEEECC---CSSCEEEEEEESGGGCC-CCCEEEEEETTS
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeC-CCCCccEEEEEe---cccceEEEeeccccccCCCccEEEEEeCCC
Confidence 99999999998 3 899999999 9999999 7766 8888887 99999999764 554 99999999
Q ss_pred eEEEEecCCcc-ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEE----Eec--CeEEEEecCCeEE
Q 038568 93 KIRVWKITASR-QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV----VKQ--GLMYSVSWDRSFK 165 (357)
Q Consensus 93 ~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~--~~l~~~~~dg~i~ 165 (357)
.|++||+.+++ ....+..... .+...+.+++ |++ .++++++.||.|+
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~--------------------------~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~ 193 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQG--------------------------ENKRDCWTVAFGNAYNQEERVVCAGYDNGDIK 193 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTT--------------------------SCCCCEEEEEEECCCC-CCCEEEEEETTSEEE
T ss_pred eEEEEeCCCCCCcceeccccCC--------------------------CCCCceEEEEEEeccCCCCCEEEEEccCCeEE
Confidence 99999999876 3333322110 2244788888 555 8999999999999
Q ss_pred EEEcCcchhhhhccccccccEEEEEEec---CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEE
Q 038568 166 IWNASNYKCLESVNKAHEDAVNAVVVSD---NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALA 241 (357)
Q Consensus 166 iwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 241 (357)
+||+++++.... ..+...+.+++|+| ++ .+++++.||.|++||++..... .......+..|...|++++
T Consensus 194 i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~~~~~~v~~~~ 266 (357)
T 3i2n_A 194 LFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT-----KGFASVSEKAHKSTVWQVR 266 (357)
T ss_dssp EEETTTTEEEEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT-----TEEEEEEEECCSSCEEEEE
T ss_pred EEECccCceeee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc-----cceeeeccCCCcCCEEEEE
Confidence 999998887544 47889999999998 66 6999999999999999822110 1111224458999999999
Q ss_pred EecCCC-EEEEEecCCeEEEEecccCCce----------------eeeeeccCCccceEEEeecCc--eEE-EecCCCeE
Q 038568 242 LNGDGS-LLFSGGCDRWIVVWERERDHRM----------------VFAEALWGHTGALLCLINVGD--LLA-SGSADRTV 301 (357)
Q Consensus 242 ~~~~~~-~l~~~~~dg~i~vwd~~~~~~~----------------~~~~~~~~~~~~v~~~~~~~~--~l~-~~~~dg~i 301 (357)
|+|+++ +|++++.||.|++||++..... .....+.+|...|.+++|+++ +|+ +++.||.|
T Consensus 267 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i 346 (357)
T 3i2n_A 267 HLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTV 346 (357)
T ss_dssp EETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEE
T ss_pred ECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcE
Confidence 999998 8999999999999999865433 356677889999999999887 676 89999999
Q ss_pred EEeeCCCC
Q 038568 302 RIWQRGKE 309 (357)
Q Consensus 302 ~vw~~~~~ 309 (357)
++||+.+.
T Consensus 347 ~iw~~~~~ 354 (357)
T 3i2n_A 347 RVLIVTKL 354 (357)
T ss_dssp EEEEECC-
T ss_pred EEEECCCc
Confidence 99999875
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1e-34 Score=249.29 Aligned_cols=245 Identities=20% Similarity=0.326 Sum_probs=203.1
Q ss_pred CccceeEEEEe---cceEEEeeCC-ceEEEeccCC----------ccccceeccccCCCCceEEEEEecCc---eEEeec
Q 038568 28 HHMIISCLAVH---NSLLYAASLN-EINVFDLISD----------YSHVDTFSNDLSSSGSVKSITFHITK---IFTAHQ 90 (357)
Q Consensus 28 h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~----------~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~ 90 (357)
|.+.|++++|+ +++||+++.| .|++|++ .. .+.+..+.+ |...|.+++|+|++ |++++.
T Consensus 127 h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~-~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 127 HEGEVNRARYMPQNACVIATKTPSSDVLVFDY-TKHPSKPEPSGECQPDLRLRG---HQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp ESSCCSEEEEETTEEEEEEEECSSSCEEEEEG-GGSCSSCCTTCCCCCSEEEEC---CSSCCCCEEECTTSTTEEEEECT
T ss_pred CCCcEEEEEECCCCCcEEEEECCCCcEEEEEC-CCcccccCccccCCCcEEecC---CCCCeEEEEeCCCCCCeEEEEeC
Confidence 99999999999 4699999999 9999999 65 567777777 99999999999874 999999
Q ss_pred CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEE
Q 038568 91 DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIW 167 (357)
Q Consensus 91 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iw 167 (357)
||.|++|++..+......... ...+..|...|.+++|+| .+|++++.||.|++|
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~-----------------------~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~ 259 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDA-----------------------KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIW 259 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEEC-----------------------SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCeEEEEeCCCCCCCCceecc-----------------------ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEE
Confidence 999999999874321111000 012237889999999998 789999999999999
Q ss_pred EcCcc---hhhhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEE
Q 038568 168 NASNY---KCLESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242 (357)
Q Consensus 168 d~~~~---~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 242 (357)
|++++ +.+..+ ..|...|++++|+|++ .+++|+.||.|++||++. ...++..+..|...|.+++|
T Consensus 260 d~~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~---------~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 260 DTRNNNTSKPSHTV-DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN---------LKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp ETTCSCSSSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC---------TTSCSEEEECCSSCEEEEEE
T ss_pred ECCCCCCCcceeEe-ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC---------CCCCeEEeecCCCCEEEEEE
Confidence 99987 455566 6889999999999988 488999999999999982 13456777889999999999
Q ss_pred ecCCC-EEEEEecCCeEEEEecccCCc-----------eeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCC
Q 038568 243 NGDGS-LLFSGGCDRWIVVWERERDHR-----------MVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRG 307 (357)
Q Consensus 243 ~~~~~-~l~~~~~dg~i~vwd~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~ 307 (357)
+|+++ +|++++.|+.|++||+..... ......+.+|...|.+++|+++ +|++++.||.|++|++.
T Consensus 330 sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 330 SPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 99885 799999999999999987321 1355667789999999999887 89999999999999997
Q ss_pred CC
Q 038568 308 KE 309 (357)
Q Consensus 308 ~~ 309 (357)
..
T Consensus 410 ~~ 411 (430)
T 2xyi_A 410 EN 411 (430)
T ss_dssp HH
T ss_pred cc
Confidence 53
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=7.7e-34 Score=227.27 Aligned_cols=292 Identities=14% Similarity=0.092 Sum_probs=203.2
Q ss_pred ccccceecccccCCCCCCCccceeEEEEe--c---ceEEEeeCCceEEEeccCCc---cccceeccccCCCCceEEEEEe
Q 038568 10 EAFKHHCIASLKIPSPDPHHMIISCLAVH--N---SLLYAASLNEINVFDLISDY---SHVDTFSNDLSSSGSVKSITFH 81 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~---~~l~t~~~d~i~iw~~~~~~---~~~~~~~~~~~~~~~v~~l~~~ 81 (357)
++-..|.+..|+.+.|. -.-.+.++-|- + --+++++...|++|+. .+. +.++++.. |+.+|..+.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~-~~~~~~~~~~~~~~---~~~~v~~~~~~ 95 (356)
T 2w18_A 21 NPGNLQLVSELKNPSGS-CSVDVSAMFWERAGCKEPCIITACEDVVSLWKA-LDAWQWEKLYTWHF---AEVPVLQIVPV 95 (356)
T ss_dssp ---CEEEEEEECCCCSS-CEEEEEEEEEC----CEEEEEEEESSEEEEEEE-SSSSBEEEEEEEEC---CSSCEEEECCC
T ss_pred CcceeeeeehhcCCCCC-eEEEEeeeeeccCCCCccEEEEeccceEEEccc-CCCccceeeEEEec---cCceeEEEEEc
Confidence 34467788888864441 12235555554 2 3688888889999999 777 78888887 99999999999
Q ss_pred cCc--eEEeec-C-CeEEEEecCCccc----eeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecC
Q 038568 82 ITK--IFTAHQ-D-CKIRVWKITASRQ----HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQG 153 (357)
Q Consensus 82 ~~~--l~~~~~-d-~~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 153 (357)
||. |++... . ..-.++-+.-... .+.+.. .+|...|.++ ...
T Consensus 96 ~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s----------------------------~g~~~~v~~l--~~g 145 (356)
T 2w18_A 96 PDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLK----------------------------SGNIKAVLGL--TKR 145 (356)
T ss_dssp TTCCSCEEEEECSSSEEEEEEECC------CCEEEEE----------------------------EEEEEEEEEE--TTT
T ss_pred CcccceeeeeeccccccceEEEEECCCccccccEEEe----------------------------CCCeEEEEec--CCC
Confidence 974 333221 1 1111111111000 011000 1444445544 335
Q ss_pred eEEEEe---cCCeEEEEEcC-cchhhhhccccccccEEEEEEec---CC-eEEEEeCCCeEEEEEcccccccccccccee
Q 038568 154 LMYSVS---WDRSFKIWNAS-NYKCLESVNKAHEDAVNAVVVSD---NG-VVYTGSADGRIRVWERSVVDHNKERKSRHM 225 (357)
Q Consensus 154 ~l~~~~---~dg~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~~---~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 225 (357)
.++..+ .|+.|++|++. +++.+..+ ..|...+..++|++ ++ .|++++.|++|++||++ ..+
T Consensus 146 ~lv~ss~~g~d~~V~~~~~s~dG~~~~s~-~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~----------TGk 214 (356)
T 2w18_A 146 RLVSSSGTLSDQQVEVMTFAEDGGGKENQ-FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK----------TGQ 214 (356)
T ss_dssp EEEEEESSSTTCEEEEEEECTTSCEEEEE-EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT----------TCC
T ss_pred cEEEecccCCCCcEEEEEECCCCceeeee-ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC----------CCc
Confidence 555554 49999999994 47777776 78888999999998 44 69999999999999998 456
Q ss_pred eeeEeeccc---cceeEEEEecCCCEE------------EEEecCCeEEEEecccCCceeeee--eccCCccceEEEeec
Q 038568 226 LVTTLVKHR---STVNALALNGDGSLL------------FSGGCDRWIVVWERERDHRMVFAE--ALWGHTGALLCLINV 288 (357)
Q Consensus 226 ~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~ 288 (357)
.+..+.+|. ..+.+++|+|+|.++ ++|+.|++|++||..+++.+.... ...+|.....+..++
T Consensus 215 ~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s 294 (356)
T 2w18_A 215 LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK 294 (356)
T ss_dssp EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE
T ss_pred EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC
Confidence 667776544 357778999999876 567889999999999887543221 124677667777777
Q ss_pred CceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceE-EEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVK-SLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 289 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.++++++.|++|+|||+.++ +++..+.+|...+. .++|+|+++ +|++|+.|++|||||
T Consensus 295 g~~lASgS~DgTIkIWDl~tG---k~l~tL~gH~~~vvs~vafSPDG~-------~LaSGS~D~TIklWd 354 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLG---QCTALLPPVSDQHWSFVKWSGTDS-------HLLAGQKDGNIFVYH 354 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTC---SEEEEECCC--CCCCEEEECSSSS-------EEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCC---cEEEEecCCCCCeEEEEEECCCCC-------EEEEEECCCcEEEec
Confidence 779999999999999999998 77788888987655 689999999 999999999999997
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-35 Score=269.61 Aligned_cols=248 Identities=20% Similarity=0.286 Sum_probs=202.9
Q ss_pred ceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccccccccc
Q 038568 63 DTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLE 140 (357)
Q Consensus 63 ~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (357)
..+.+ |.+.|++++|+|++ |++|+.||.|++||+..+.. .....+ .+
T Consensus 3 ~~l~g---H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-~~~~~l---------------------------~~ 51 (753)
T 3jro_A 3 VIANA---HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTL---------------------------TG 51 (753)
T ss_dssp --------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-EEEEEE---------------------------CC
T ss_pred eeccc---CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-ccceec---------------------------cC
Confidence 34566 99999999999987 99999999999999974332 122222 28
Q ss_pred ccccEEEEEEec----CeEEEEecCCeEEEEEcCcch--hhhhccccccccEEEEEEecC--C-eEEEEeCCCeEEEEEc
Q 038568 141 HWDAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDN--G-VVYTGSADGRIRVWER 211 (357)
Q Consensus 141 ~~~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~--~-~l~~~~~d~~i~i~d~ 211 (357)
|...|.+++|++ +++++|+.||.|++||+.+++ .+..+ ..|...|.+++|+|+ + .+++|+.||.|++||+
T Consensus 52 h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 52 HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp CSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 999999999985 689999999999999999876 55555 679999999999998 6 6999999999999999
Q ss_pred cccccccccccceeeeeEeeccccceeEEEEec-------------CCCEEEEEecCCeEEEEecccCCce-eeeeeccC
Q 038568 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNG-------------DGSLLFSGGCDRWIVVWERERDHRM-VFAEALWG 277 (357)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~ 277 (357)
+. . .......+..|...|.+++|+| ++.++++|+.||.|++||++++... .....+.+
T Consensus 131 ~~------~--~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 131 KE------N--GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp CS------S--SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred ec------C--CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 82 1 1223445678999999999999 5899999999999999999876533 34566778
Q ss_pred CccceEEEeecC-----ceEEEecCCCeEEEeeCCCCcce--eeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCC
Q 038568 278 HTGALLCLINVG-----DLLASGSADRTVRIWQRGKENCY--RCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLN 350 (357)
Q Consensus 278 ~~~~v~~~~~~~-----~~l~~~~~dg~i~vw~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~d 350 (357)
|...|.+++|+| .+|++++.||.|++||+++++.. ..+.....|...|++++|+|+++ +|++|+.|
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-------~l~s~s~D 275 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-------VLALSGGD 275 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-------CEEEECSS
T ss_pred CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-------EEEEEcCC
Confidence 999999999985 48999999999999999886321 23344556889999999999998 99999999
Q ss_pred CeEEecC
Q 038568 351 GEIKVWD 357 (357)
Q Consensus 351 g~v~~wd 357 (357)
|.|++||
T Consensus 276 g~I~vwd 282 (753)
T 3jro_A 276 NKVTLWK 282 (753)
T ss_dssp SCEECCB
T ss_pred CEEEEEe
Confidence 9999997
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-34 Score=233.96 Aligned_cols=242 Identities=21% Similarity=0.287 Sum_probs=203.4
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCc---cccceeccccCCCCceEEEEEecCce
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDY---SHVDTFSNDLSSSGSVKSITFHITKI 85 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~---~~~~~~~~~~~~~~~v~~l~~~~~~l 85 (357)
...+....+.. |...|.+++|+ +++|++|+.| .|++|++ ... +.+..+.+ |...|.+++|.++.+
T Consensus 47 ~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~-~~~~~~~~~~~~~~---~~~~i~~~~~~~~~l 117 (313)
T 3odt_A 47 DDQWLGTVVYT-----GQGFLNSVCYDSEKELLLFGGKDTMINGVPL-FATSGEDPLYTLIG---HQGNVCSLSFQDGVV 117 (313)
T ss_dssp SSSEEEEEEEE-----CSSCEEEEEEETTTTEEEEEETTSCEEEEET-TCCTTSCC-CEECC---CSSCEEEEEEETTEE
T ss_pred CCCEEEEEeec-----CCccEEEEEECCCCCEEEEecCCCeEEEEEe-eecCCCCcccchhh---cccCEEEEEecCCEE
Confidence 34556666665 99999999999 8999999999 9999998 443 45666766 999999999977779
Q ss_pred EEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCC
Q 038568 86 FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDR 162 (357)
Q Consensus 86 ~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg 162 (357)
++++.|+.|++|| .++....+ ..|...+.++.+.+ +++++++.||
T Consensus 118 ~~~~~d~~i~~~d--~~~~~~~~------------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 118 ISGSWDKTAKVWK--EGSLVYNL------------------------------QAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp EEEETTSEEEEEE--TTEEEEEE------------------------------ECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCCEEEEc--CCcEEEec------------------------------ccCCCceeEEEEccCCCCEEEEEECCC
Confidence 9999999999999 23222222 27889999999976 8999999999
Q ss_pred eEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEE
Q 038568 163 SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL 242 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 242 (357)
.|++||. .+.+..+...+...+.+++|+|++.+++++.|+.|++||++ ..+.+..+..|...|.+++|
T Consensus 166 ~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~----------~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 166 TIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH----------TGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp CEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT----------TCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC----------chhhhhhhhcCCceEEEEEE
Confidence 9999994 44555553448999999999999999999999999999998 45677788889999999999
Q ss_pred ecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc
Q 038568 243 NGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 243 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 310 (357)
+|++ .|++++.||.|++||+++++ ....+..|...+.+++|+++ .+++++.||.|++||+++++
T Consensus 234 ~~~~-~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 234 LPNG-DIVSCGEDRTVRIWSKENGS---LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp CTTS-CEEEEETTSEEEEECTTTCC---EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred ecCC-CEEEEecCCEEEEEECCCCc---eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 9999 58999999999999999887 44555678889999999887 67889999999999999863
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.7e-34 Score=242.65 Aligned_cols=230 Identities=12% Similarity=0.059 Sum_probs=164.6
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec----------Ce
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ----------GL 154 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------~~ 154 (357)
|++++.|++|++||.+.++....... ..+.+|.+.|.+++|+| ++
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~-------------------------~~~~gH~~~v~~v~~~p~~~~~~~~d~~~ 158 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVL-------------------------GGKSGHHNFVNDIDIADVYSADNRLAEQV 158 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEE-------------------------CTTTSCSSCEEEEEEEEEECTTCSEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeee-------------------------cccCCCCCceEEEEEccccccccCCCCCE
Confidence 89999999999999987754322111 22349999999999985 58
Q ss_pred EEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEcccccccccccc----------
Q 038568 155 MYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKS---------- 222 (357)
Q Consensus 155 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~---------- 222 (357)
|++++.|++|++||++++.++..+ ..|...+.+++|+|++ +|++++.|+.|++||++..........
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~ 237 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLL 237 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEE-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSE
T ss_pred EEEEECCCeEEEEECCCCceeeee-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEE
Confidence 999999999999999888777776 6888999999999987 599999999999999985432211100
Q ss_pred -----ceeeeeEeeccccceeEEEEe-cCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEE------------
Q 038568 223 -----RHMLVTTLVKHRSTVNALALN-GDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLC------------ 284 (357)
Q Consensus 223 -----~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~------------ 284 (357)
.........+|...+.++.|+ |+++.|++++.|+++++||+........ +..|...+..
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNE---ISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECS
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCce---EeeecCccccEEEccccccccc
Confidence 001112234677889999997 6999999999999999999986653222 2222222211
Q ss_pred ------EeecC--c--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeE
Q 038568 285 ------LINVG--D--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEI 353 (357)
Q Consensus 285 ------~~~~~--~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v 353 (357)
..+.+ + ++++|+.||.|++||+.++ +....+.+|..+|++++|+|+++ +||+++.||.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~---~~~~~~~~~~~~V~svafspdG~-------~LA~as~~Gv~ 383 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK---DSNSIPIQLGMPIVDFCWHQDGS-------HLAIATEGSVL 383 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT---TCCEEEEECSSCEEEEEECTTSS-------EEEEEESSEEE
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC---cEEEEecCCCCcEEEEEEcCCCC-------EEEEEeCCCeE
Confidence 11222 2 6788899999999999987 44555667889999999999999 99999988763
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.5e-34 Score=239.66 Aligned_cols=247 Identities=11% Similarity=0.061 Sum_probs=194.6
Q ss_pred CCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEE
Q 038568 70 SSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD 147 (357)
Q Consensus 70 ~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (357)
+|.+.|++++|+|++ |++++.|+.|++|++.+++........ ..|...|.+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~---------------------------~~~~~~v~~ 61 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQS---------------------------LRYKHPLLC 61 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEE---------------------------EECSSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceee---------------------------eecCCceEE
Confidence 399999999999986 999999999999999877622222211 278899999
Q ss_pred EEEec--C-eEEEEecCCeEEEEEc-Ccchhhhhcccc--ccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccc
Q 038568 148 LVVKQ--G-LMYSVSWDRSFKIWNA-SNYKCLESVNKA--HEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERK 221 (357)
Q Consensus 148 ~~~~~--~-~l~~~~~dg~i~iwd~-~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 221 (357)
++|+| + +|++++.||.|++||+ .+++. ..+ .. |...|.+++|+|...+++++.|+.|++||++....... .
T Consensus 62 ~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~-~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~-~ 138 (342)
T 1yfq_A 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QAL-TNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVI-A 138 (342)
T ss_dssp EEEEESSSEEEEEEETTSCEEEECSSSSSSE-EEC-BSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCE-E
T ss_pred EEECCCCCcEEEEEcCCCeEEEEEeccCCce-Eec-cccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccc-c
Confidence 99998 7 8999999999999999 77655 444 56 99999999999944799999999999999972100000 0
Q ss_pred cceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEeccc-CCceeeeeeccCCccceEEEeecC-c--eEEEecC
Q 038568 222 SRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER-DHRMVFAEALWGHTGALLCLINVG-D--LLASGSA 297 (357)
Q Consensus 222 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~--~l~~~~~ 297 (357)
...+++..+. |...|.+++|+|++ +++++.|+.|++||+++ .... .......|...+.+++|++ + ++++++.
T Consensus 139 ~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 139 VKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDN-GTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp EEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCC-CEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred ccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccc-ceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 0023333444 78899999999986 99999999999999997 5432 2233446788899999987 5 9999999
Q ss_pred CCeEEEeeCCCCc---ceeeeeeecCCcC---------ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 298 DRTVRIWQRGKEN---CYRCMAFLEGHEK---------PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 298 dg~i~vw~~~~~~---~~~~~~~~~~h~~---------~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
||.|++|+++... ..+....+..|.. +|++++|+|+++ +|++++.||.|++||
T Consensus 215 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-------~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 215 DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-------FLYTAGSDGIISCWN 279 (342)
T ss_dssp TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-------CEEEEETTSCEEEEE
T ss_pred CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC-------EEEEecCCceEEEEc
Confidence 9999999998750 0134455666654 999999999998 999999999999997
No 110
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=250.84 Aligned_cols=247 Identities=12% Similarity=0.179 Sum_probs=187.1
Q ss_pred CCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccccccccccc------
Q 038568 71 SSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHW------ 142 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 142 (357)
+.+.|++++|+|++ |++|+.||.|++||+.+++........ ... ....+.+|.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~--------------~~~-----~~~~~~~h~~~~~~~ 87 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRG--------------EYN-----VYSTFQSHEPEFDYL 87 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCC--------------CEE-----EEEEEECCCCEEEGG
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccccc--------------cee-----Eeccccccccccccc
Confidence 78899999999987 999999999999999876521100000 000 001122666
Q ss_pred ------ccEEEEEEec----CeEEEEecCCeEEEEEcCcchhh-------------------------------------
Q 038568 143 ------DAVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKCL------------------------------------- 175 (357)
Q Consensus 143 ------~~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~------------------------------------- 175 (357)
..|.+++|+| ..|++++.|+.|++||+.+++..
T Consensus 88 ~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (447)
T 3dw8_B 88 KSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEAS 167 (447)
T ss_dssp GTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEE
T ss_pred ccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeecc
Confidence 8899999999 37999999999999999764431
Q ss_pred --hhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeee-------EeeccccceeEEEEecC
Q 038568 176 --ESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVT-------TLVKHRSTVNALALNGD 245 (357)
Q Consensus 176 --~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~ 245 (357)
..+...|...|.+++|+|++ .|++| .|+.|++||++. ...... .+..|...|.+++|+|+
T Consensus 168 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 168 PRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEI---------TDRSFNIVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp EEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTE---------EEEEEEEEECCCSSGGGCCCCEEEEEECSS
T ss_pred ceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCC---------CCceeeeeecccccccccCcceEEEEECCC
Confidence 12225789999999999998 57777 899999999972 111222 35678999999999999
Q ss_pred C-CEEEEEecCCeEEEEecccCCce-eeeeeccCCcc------------ceEEEeecCc--eEEEecCCCeEEEeeCCC-
Q 038568 246 G-SLLFSGGCDRWIVVWERERDHRM-VFAEALWGHTG------------ALLCLINVGD--LLASGSADRTVRIWQRGK- 308 (357)
Q Consensus 246 ~-~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~------------~v~~~~~~~~--~l~~~~~dg~i~vw~~~~- 308 (357)
+ ++|++|+.||.|++||+++++.. .....+.+|.. .|.+++|+++ +|++++. +.|++||+++
T Consensus 238 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~ 316 (447)
T 3dw8_B 238 SCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNME 316 (447)
T ss_dssp CTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCC
T ss_pred CCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCC
Confidence 8 99999999999999999987631 11344555664 8999999877 8899888 9999999987
Q ss_pred CcceeeeeeecCCcCc---------------eEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 309 ENCYRCMAFLEGHEKP---------------VKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 309 ~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+ +++..+.+|... +..++|+|+++ +|++|+.||.|++||
T Consensus 317 ~---~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~-------~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 317 N---RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDS-------VVMTGSYNNFFRMFD 370 (447)
T ss_dssp S---SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSS-------EEEEECSTTEEEEEE
T ss_pred c---cccceeeccccccccccccccccccccceEEEECCCCC-------EEEEeccCCEEEEEE
Confidence 4 556677777542 33499999998 999999999999997
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=229.32 Aligned_cols=249 Identities=21% Similarity=0.256 Sum_probs=205.4
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEE
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFT 87 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~ 87 (357)
..++++++.++. .+ |...|++++|+ +++||+|+.| .|++||+ ++++.+..+.+ |...+.++.+.+..+++
T Consensus 52 ~~tg~~~~~~~~-~~--~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~-~~~~~~~~~~~---h~~~~~~~~~~~~~l~s 124 (318)
T 4ggc_A 52 ASSGDILQLLQM-EQ--PGEYISSVAWIKEGNYLAVGTSSAEVQLWDV-QQQKRLRNMTS---HSARVGSLSWNSYILSS 124 (318)
T ss_dssp TTTCCEEEEEEC-CS--TTCCEEEEEECTTSSEEEEEETTSEEEEEET-TTTEEEEEEEC---CSSCEEEEEEETTEEEE
T ss_pred CCCCCEEEEEEe-cC--CCCeEEEEEECCCCCEEEEEECCCcEEEeec-CCceeEEEecC---ccceEEEeecCCCEEEE
Confidence 345666666652 23 88999999999 8999999999 9999999 99999999998 99999999998888999
Q ss_pred eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEE
Q 038568 88 AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFK 165 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~ 165 (357)
++.++.+++|+........... .+|...+..+.+.+ .++++++.||.|+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 175 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAEHHVATL-----------------------------SGHSQEVCGLRWAPDGRHLASGGNDNLVN 175 (318)
T ss_dssp EETTSEEEEEETTSSSCEEEEE-----------------------------ECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EecCCceEeeecCCCceeEEEE-----------------------------cCccCceEEEEEcCCCCEEEEEecCccee
Confidence 9999999999988765332211 28889999999999 8999999999999
Q ss_pred EEEcCcchhhhhc---cccccccEEEEEEecCC--e--EEEEeCCCeEEEEEccccccccccccceeeeeEeecccccee
Q 038568 166 IWNASNYKCLESV---NKAHEDAVNAVVVSDNG--V--VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN 238 (357)
Q Consensus 166 iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~--~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (357)
+||+++++..... ...+...|.++.+.|++ . +++++.++.|++||.+ ..... ....+...+.
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~----------~~~~~-~~~~~~~~v~ 244 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC----------SGACL-SAVDAHSQVC 244 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT----------TCCEE-EEEECSSCEE
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc----------ccccc-ccccceeeee
Confidence 9999987654332 14577889999999876 2 4567789999999987 22222 3344677899
Q ss_pred EEEEecCCCEEEEEe--cCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 239 ALALNGDGSLLFSGG--CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 239 ~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
.+.|+|+++.+++++ .|+.|++||+++++ .+..+.+|...|.+++|+++ +|++|+.||+|+|||+.+.
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999887654 79999999999887 45677899999999999876 9999999999999999764
No 112
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-33 Score=235.28 Aligned_cols=255 Identities=17% Similarity=0.207 Sum_probs=212.6
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--e
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--I 85 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l 85 (357)
....+++..+.+ |.+.|++++|+ +++|++++.| .|++||+ .+++.+..+. +...|.+++|+|++ +
T Consensus 61 ~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 61 SLNGERLGTLDG-----HTGTIWSIDVDCFTKYCVTGSADYSIKLWDV-SNGQCVATWK----SPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp TTTCCEEEEECC-----CSSCEEEEEECTTSSEEEEEETTTEEEEEET-TTCCEEEEEE----CSSCEEEEEECTTSSEE
T ss_pred CCCchhhhhhhh-----cCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC-CCCcEEEEee----cCCCeEEEEEccCCCEE
Confidence 345667777776 99999999999 8999999999 9999999 8888888887 88999999999987 8
Q ss_pred EEeecC-----CeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccc--cEEEEEEec--CeEE
Q 038568 86 FTAHQD-----CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWD--AVSDLVVKQ--GLMY 156 (357)
Q Consensus 86 ~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~--~~l~ 156 (357)
++++.+ +.|++||+........+..... .....+..|.. .+.+++|+| ++++
T Consensus 131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (369)
T 3zwl_B 131 LAILDNVMKNPGSINIYEIERDSATHELTKVSE-------------------EPIHKIITHEGLDAATVAGWSTKGKYII 191 (369)
T ss_dssp EEEECCBTTBCCEEEEEEEEECTTTCCEEEECS-------------------SCSEEEECCTTCCCEEEEEECGGGCEEE
T ss_pred EEecCCccCCCCEEEEEEecCCccceeeccccc-------------------ceeeeccCCcCccceeEEEEcCCCCEEE
Confidence 888888 9999999987654433322111 00111124445 899999999 8999
Q ss_pred EEecCCeEEEEEcCc-chhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccc
Q 038568 157 SVSWDRSFKIWNASN-YKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHR 234 (357)
Q Consensus 157 ~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 234 (357)
+++.||.|++||+++ .+.+..+ ..|...|.+++|+|++ +|++++.|+.|++||++ .......+. +.
T Consensus 192 ~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~----------~~~~~~~~~-~~ 259 (369)
T 3zwl_B 192 AGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS----------TLQVLKKYE-TD 259 (369)
T ss_dssp EEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT----------TCCEEEEEE-CS
T ss_pred EEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECC----------CCceeeeec-CC
Confidence 999999999999998 6677777 7889999999999999 69999999999999998 334444444 77
Q ss_pred cceeEEEEecCCCEEEEEecCC--------------eEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCC
Q 038568 235 STVNALALNGDGSLLFSGGCDR--------------WIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSAD 298 (357)
Q Consensus 235 ~~v~~~~~~~~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~d 298 (357)
..+.+++|+|+++++++++.++ .+++||..+++ ....+.+|...|.+++|+++ +|++++.|
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE---EIGRVQGHFGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC---EEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc---chhheecccCcEEEEEECCCCCEEEEEcCC
Confidence 8899999999999999999988 89999999887 44566789999999999876 99999999
Q ss_pred CeEEEeeCCCC
Q 038568 299 RTVRIWQRGKE 309 (357)
Q Consensus 299 g~i~vw~~~~~ 309 (357)
|.|++|+++++
T Consensus 337 g~v~iw~~~~~ 347 (369)
T 3zwl_B 337 GFIRLHHFEKS 347 (369)
T ss_dssp SEEEEEEECHH
T ss_pred CeEEEEECccc
Confidence 99999999865
No 113
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.8e-33 Score=239.67 Aligned_cols=242 Identities=14% Similarity=0.199 Sum_probs=194.1
Q ss_pred CccceeEEEEe---cceEEEeeCC-ceEEEeccCCc-------cccceeccccCCCCceEEEEEecCc---eEEeecCCe
Q 038568 28 HHMIISCLAVH---NSLLYAASLN-EINVFDLISDY-------SHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCK 93 (357)
Q Consensus 28 h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~-------~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~ 93 (357)
|.+.|++++|+ +++|++|+.| .|+|||+ .++ +.+..+.+ |...|.+++|+|++ |++++.|+.
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~-~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEI-PDGGLVLPLREPVITLEG---HTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEEC-CTTCCSSCBCSCSEEEEC---CSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEc-cCCCCccccCCceEEecC---CCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 99999999997 7899999999 9999999 766 56777887 99999999999984 999999999
Q ss_pred EEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCc
Q 038568 94 IRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASN 171 (357)
Q Consensus 94 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~ 171 (357)
|++||+.+++....+.. ..|...|.+++|+| .+|++++.||.|++||+++
T Consensus 156 i~iwd~~~~~~~~~~~~----------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGP----------------------------DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp EEEEETTTTEEEEEECT----------------------------TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred EEEEECCCCCccEEEec----------------------------CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 99999998765443310 17889999999999 8999999999999999999
Q ss_pred chhhhhcccccccc-EEEEEEecCCe-EEEE---eCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCC
Q 038568 172 YKCLESVNKAHEDA-VNAVVVSDNGV-VYTG---SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG 246 (357)
Q Consensus 172 ~~~~~~~~~~~~~~-v~~~~~~~~~~-l~~~---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 246 (357)
++.+..+...|... +.++.|+|++. |++| +.|+.|++||++. ... ........+...+.+++|+|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~------~~~--~~~~~~~~~~~~v~~~~~s~~~ 279 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKH------LEE--PLSLQELDTSSGVLLPFFDPDT 279 (402)
T ss_dssp TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTB------CSS--CSEEEECCCCSSCEEEEEETTT
T ss_pred CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcc------ccC--CceEEeccCCCceeEEEEcCCC
Confidence 88887763455554 89999999995 6666 6899999999982 111 1111222467789999999999
Q ss_pred CEEEE-EecCCeEEEEecccCCc-eeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCc
Q 038568 247 SLLFS-GGCDRWIVVWERERDHR-MVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 247 ~~l~~-~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 310 (357)
++|++ |+.||.|++||+.+++. ...+..+. |...+.+++|+++....++.++.+++|++.++.
T Consensus 280 ~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 280 NIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMPKRGLEVNKCEIARFYKLHERK 344 (402)
T ss_dssp TEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECCGGGSCGGGTEEEEEEEEETTE
T ss_pred CEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEecccccceecceeEEEEEcCCCc
Confidence 98864 55799999999998774 33333333 678899999999833334567799999998763
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.3e-32 Score=231.55 Aligned_cols=250 Identities=16% Similarity=0.246 Sum_probs=195.9
Q ss_pred EeccCCccccceeccccCCCCceEEEEEecC---c--eEEeecCCeEEEEecCC-ccceeeeeecCccccceeeeecCCC
Q 038568 53 FDLISDYSHVDTFSNDLSSSGSVKSITFHIT---K--IFTAHQDCKIRVWKITA-SRQHQLVSTLPTVKDRLIRSVLPNN 126 (357)
Q Consensus 53 w~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~--l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (357)
|+. ...+.+..+.+ |.+.|++++|+|+ + |++++.||.|++||+.+ +......
T Consensus 24 ~~~-~~~~~~~~~~~---h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~------------------ 81 (368)
T 3mmy_A 24 DNH-NPMKDIEVTSS---PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKA------------------ 81 (368)
T ss_dssp CSS-CTTCCEECSSC---CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEE------------------
T ss_pred CCC-CCcceeEeccC---CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEE------------------
Confidence 344 45566667776 9999999999997 3 99999999999999987 3322111
Q ss_pred eEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEE--ecCC-eEEEEe
Q 038568 127 YVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVV--SDNG-VVYTGS 201 (357)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~-~l~~~~ 201 (357)
+.+|...|.+++|+| ++|++++.||.|++||+++++.+.. ..|...|.+++| +|++ .|++++
T Consensus 82 -----------~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 82 -----------QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI--AQHDAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp -----------EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEEEECSSCEEEEEEE
T ss_pred -----------eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee--ccccCceEEEEEEeCCCCCEEEEcc
Confidence 127899999999999 7999999999999999999887764 479999999999 7888 599999
Q ss_pred CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceee-eeeccCCcc
Q 038568 202 ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF-AEALWGHTG 280 (357)
Q Consensus 202 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~~~~~ 280 (357)
.|+.|++||++ ..+.+..+..+ ..+.++.+.+ ..+++++.++.+++|+++....... ......+..
T Consensus 149 ~dg~i~vwd~~----------~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 215 (368)
T 3mmy_A 149 WDKTLKFWDTR----------SSNPMMVLQLP-ERCYCADVIY--PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215 (368)
T ss_dssp TTSEEEEECSS----------CSSCSEEEECS-SCEEEEEEET--TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE
T ss_pred CCCcEEEEECC----------CCcEEEEEecC-CCceEEEecC--CeeEEEeCCCcEEEEEeccccchhhhccccccCCC
Confidence 99999999998 33444555544 3566666654 4888999999999999987653221 122223444
Q ss_pred ceEEEeecCc----eEEEecCCCeEEEeeCCCCcceeeeeeecCCcC------------ceEEEEEeeCCCCCCCCeEEE
Q 038568 281 ALLCLINVGD----LLASGSADRTVRIWQRGKENCYRCMAFLEGHEK------------PVKSLVAISSSSSASNGIVSI 344 (357)
Q Consensus 281 ~v~~~~~~~~----~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~------------~v~~~~~~~~~~~~~~~~~~l 344 (357)
.+.++.+.+. .+++++.||.|++|+++.......+..+.+|.. +|++++|+|+++ +|
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-------~l 288 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG-------TL 288 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC-------CE
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCC-------EE
Confidence 4555555444 499999999999999998754455667777776 799999999998 99
Q ss_pred EEcCCCCeEEecC
Q 038568 345 GSGSLNGEIKVWD 357 (357)
Q Consensus 345 ~s~~~dg~v~~wd 357 (357)
++++.||.|++||
T Consensus 289 ~s~~~dg~i~iwd 301 (368)
T 3mmy_A 289 ATVGSDGRFSFWD 301 (368)
T ss_dssp EEEETTSCEEEEE
T ss_pred EEEccCCeEEEEE
Confidence 9999999999997
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-32 Score=231.83 Aligned_cols=274 Identities=16% Similarity=0.243 Sum_probs=186.5
Q ss_pred CccceeEEEEe---cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecC-----ceEEeecCCeEEEEe
Q 038568 28 HHMIISCLAVH---NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT-----KIFTAHQDCKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-----~l~~~~~d~~i~vwd 98 (357)
|...|.+++|+ +++|++++.| .|++||+ .+++....+. +...+.++.|++. .+++++.|+.|++||
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDT-NTLQTADVFN----FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEET-TTTEEEEEEE----CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeC-CCCccceecc----CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 99999999998 6799999999 9999999 8888888776 8889999999974 299999999999999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--C-eEEEEecCCeEEEEEcCcch-h
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--G-LMYSVSWDRSFKIWNASNYK-C 174 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~iwd~~~~~-~ 174 (357)
+.+++....+. .|...|.+++|+| . ++++++.||.|++||++++. +
T Consensus 173 ~~~~~~~~~~~------------------------------~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~ 222 (408)
T 4a11_B 173 LKSGSCSHILQ------------------------------GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC 222 (408)
T ss_dssp SSSSCCCEEEC------------------------------CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC
T ss_pred CCCcceeeeec------------------------------CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc
Confidence 98876544332 7889999999999 4 58999999999999998754 1
Q ss_pred hhhc--------------cccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeE-eecccccee
Q 038568 175 LESV--------------NKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTT-LVKHRSTVN 238 (357)
Q Consensus 175 ~~~~--------------~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-~~~~~~~v~ 238 (357)
+..+ ...|...|.+++|+|++ +|++++.|+.|++||++..... ...... .......+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~------~~~~~~~~~~~~~~~~ 296 (408)
T 4a11_B 223 LITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT------LVNYGKVCNNSKKGLK 296 (408)
T ss_dssp SEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC------CCCCCCCCCCCSSCCC
T ss_pred cccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc------eeccccccccccccce
Confidence 1111 14688899999999998 6999999999999999832211 110000 011112222
Q ss_pred EEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeee
Q 038568 239 ALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMA 316 (357)
Q Consensus 239 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~ 316 (357)
.......+..+++++.|+.|++||+.+++ ....+.+|...|.+++|+++ +|++++.||.|++||+++.+ .+.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~---~~~ 370 (408)
T 4a11_B 297 FTVSCGCSSEFVFVPYGSTIAVYTVYSGE---QITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE---PVP 370 (408)
T ss_dssp CEECCSSSSCEEEEEETTEEEEEETTTCC---EEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------
T ss_pred eEEecCCCceEEEEecCCEEEEEECcCCc---ceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC---ccC
Confidence 22223345567777889999999999887 45567789999999999876 89999999999999999873 333
Q ss_pred eecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 317 FLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 317 ~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
....+. ....+.+... ..+.+.+.|+.+++|+
T Consensus 371 ~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 371 DDDETT---TKSQLNPAFE------DAWSSSDEEGGTSAWS 402 (408)
T ss_dssp -----------------------------------------
T ss_pred CCCceE---eccccccccc------eeecccCccCceeecC
Confidence 322222 1223333222 2566778899999995
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.6e-31 Score=230.01 Aligned_cols=275 Identities=13% Similarity=0.149 Sum_probs=211.4
Q ss_pred eecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccc-----eeccccCCCCceEEEEEecCc--
Q 038568 15 HCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVD-----TFSNDLSSSGSVKSITFHITK-- 84 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~-----~~~~~~~~~~~v~~l~~~~~~-- 84 (357)
+.+..+. +...+.+++|+ +.++++++.+ .|++||+ .+++... .+.+ |...|.+++|++++
T Consensus 114 ~~~~~~~------~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~-~~g~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~ 183 (433)
T 3bws_A 114 RFISRFK------TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDI-NSGQTVRLSPPEKYKK---KLGFVETISIPEHNEL 183 (433)
T ss_dssp EEEEEEE------CSSCBCCCEESSSSEEEEEBTTSSSEEEEET-TTCCEEEECCCHHHHT---TCCEEEEEEEGGGTEE
T ss_pred eEEEEEc------CCCCceEEEEeCCCeEEEEeCCCCeEEEEEC-CCCeEeeecCcccccc---cCCceeEEEEcCCCEE
Confidence 4555555 33456789998 6677777778 9999999 8777766 3444 89999999999877
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeE-EEEecC
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVSWD 161 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~d 161 (357)
+++++.|+.|++||+++++....+. .|...+.+++|+| +.+ ++++.|
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVD------------------------------LTGKWSKILLYDPIRDLVYCSNWIS 233 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEE------------------------------CSSSSEEEEEEETTTTEEEEEETTT
T ss_pred EEEECCCCEEEEEECCCceEEEEEc------------------------------CCCCCeeEEEEcCCCCEEEEEecCC
Confidence 8899999999999998876544332 5678899999999 555 455589
Q ss_pred CeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEe--------CCCeEEEEEccccccccccccceeeeeEeec
Q 038568 162 RSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGS--------ADGRIRVWERSVVDHNKERKSRHMLVTTLVK 232 (357)
Q Consensus 162 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
+.|++||+++++.+..+ .....+.+++|+|++ .+++++ .|+.|++||++ ..+..... .
T Consensus 234 ~~i~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~----------~~~~~~~~-~ 300 (433)
T 3bws_A 234 EDISVIDRKTKLEIRKT--DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD----------KEKLIDTI-G 300 (433)
T ss_dssp TEEEEEETTTTEEEEEC--CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT----------TTEEEEEE-E
T ss_pred CcEEEEECCCCcEEEEe--cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC----------CCcEEeec-c
Confidence 99999999998887776 334569999999999 577776 48899999997 22233332 4
Q ss_pred cccceeEEEEecCCCEE-EEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecC------------
Q 038568 233 HRSTVNALALNGDGSLL-FSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSA------------ 297 (357)
Q Consensus 233 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~------------ 297 (357)
+...+.+++|+|+++.+ ++++.|+.|++||+++++.... + .+...+.+++++++ ++++++.
T Consensus 301 ~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~---~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 376 (433)
T 3bws_A 301 PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKS---I-PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKK 376 (433)
T ss_dssp EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEE---E-ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSC
T ss_pred CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEE---e-cCCCCCCeEEEcCCCCEEEEEecCCCccccccccc
Confidence 55678899999999755 6668899999999997764322 2 25667888888876 6776665
Q ss_pred ---CCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcC-CCCeEEecC
Q 038568 298 ---DRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGS-LNGEIKVWD 357 (357)
Q Consensus 298 ---dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~-~dg~v~~wd 357 (357)
||.|++||+.++ +.+..+.. ...+.+++|+|+++ +|++++ .|+.|++||
T Consensus 377 g~~dg~v~~~d~~~~---~~~~~~~~-~~~~~~~~~s~dg~-------~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 377 GLVLGKVYVIDTTTD---TVKEFWEA-GNQPTGLDVSPDNR-------YLVISDFLDHQIRVYR 429 (433)
T ss_dssp CSSCCEEEEEETTTT---EEEEEEEC-SSSEEEEEECTTSC-------EEEEEETTTTEEEEEE
T ss_pred cccceEEEEEECCCC---cEEEEecC-CCCCceEEEcCCCC-------EEEEEECCCCeEEEEE
Confidence 579999999987 44555554 45789999999998 777665 599999996
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=234.35 Aligned_cols=268 Identities=11% Similarity=0.097 Sum_probs=194.0
Q ss_pred CCceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCcccc---c-----------eeeeecCC-CeE-------
Q 038568 72 SGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKD---R-----------LIRSVLPN-NYV------- 128 (357)
Q Consensus 72 ~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~---~-----------~~~~~~~~-~~~------- 128 (357)
..++.+++|++++ ++.++.++.|++||+.+++....+........ . ......++ ...
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 4578899999998 66677789999999998873222222211100 0 00000000 000
Q ss_pred -----EEecccccccccccccEEEEEEec--CeE-EEEecCCeEEEEEcC--cchhhhhccc-cccccEEEEEEecCC-e
Q 038568 129 -----TVRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVSWDRSFKIWNAS--NYKCLESVNK-AHEDAVNAVVVSDNG-V 196 (357)
Q Consensus 129 -----~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~i~iwd~~--~~~~~~~~~~-~~~~~v~~~~~~~~~-~ 196 (357)
............|...|.+++|+| ++| ++++.||.|++||+. +++.+..+.. .+...|.+++|+|++ +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 000000112236777899999999 664 899999999999999 7887777621 567889999999998 6
Q ss_pred EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecC---CCEEEEEecCCeEEEEecccCCceeeee
Q 038568 197 VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD---GSLLFSGGCDRWIVVWERERDHRMVFAE 273 (357)
Q Consensus 197 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 273 (357)
|++++.+|.|++|++.. ..........+.+|...|.+++|+|+ +++|++++.|+.|++||++++.... .
T Consensus 164 l~~~~~~g~v~~~~~~~------~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~--~ 235 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINS------IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD--K 235 (450)
T ss_dssp EEEEETTSEEEEEETTS------CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE--E
T ss_pred EEEEeCCCcEEEEecCC------cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee--e
Confidence 99999999999999872 21111133466789999999999999 9999999999999999999876432 2
Q ss_pred eccCCccceEEEeec-CceEEEecCCCeEEEeeCCCCcceeeeeeec-------------------------CCcCceEE
Q 038568 274 ALWGHTGALLCLINV-GDLLASGSADRTVRIWQRGKENCYRCMAFLE-------------------------GHEKPVKS 327 (357)
Q Consensus 274 ~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-------------------------~h~~~v~~ 327 (357)
.+.+|...|.+++|+ +++|++++.|+.|++||+++++. +..+. .....|.+
T Consensus 236 ~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 236 WLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKN---LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp ECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCE---EEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred eecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcE---eeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 255899999999997 44999999999999999998843 33333 23457999
Q ss_pred EEEeeCCCCCCCCeEEEEEcC-CCCeEEecC
Q 038568 328 LVAISSSSSASNGIVSIGSGS-LNGEIKVWD 357 (357)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~s~~-~dg~v~~wd 357 (357)
++|+|+++ +|++++ .|+.|++||
T Consensus 313 i~~~~~~~-------~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 313 IIKSKNLP-------FVAFFVEATKCIIILE 336 (450)
T ss_dssp EEECSSSS-------EEEEEETTCSEEEEEE
T ss_pred EEEeCCCC-------EEEEEECCCCeEEEEE
Confidence 99999998 888887 899999996
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=8e-31 Score=222.56 Aligned_cols=254 Identities=11% Similarity=0.083 Sum_probs=199.9
Q ss_pred ceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--e-EEeecCCeEEEEecCCccceeeeeecCccc
Q 038568 40 SLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--I-FTAHQDCKIRVWKITASRQHQLVSTLPTVK 115 (357)
Q Consensus 40 ~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 115 (357)
.++++++.| .|++||+ .+++.+..+.. | ..+.+++|+|++ + ++++.|+.|++||+.+++....+.
T Consensus 3 ~l~vs~~~d~~v~v~d~-~~~~~~~~~~~---~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~------ 71 (391)
T 1l0q_A 3 FAYIANSESDNISVIDV-TSNKVTATIPV---G-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP------ 71 (391)
T ss_dssp EEEEEETTTTEEEEEET-TTTEEEEEEEC---S-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE------
T ss_pred EEEEEcCCCCEEEEEEC-CCCeEEEEeec---C-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE------
Confidence 467788888 9999999 88888888874 4 458999999987 4 677799999999998886554432
Q ss_pred cceeeeecCCCeEEEecccccccccccccEEEEEEec--CeE-EEEecCCeEEEEEcCcchhhhhccccccccEEEEEEe
Q 038568 116 DRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVS 192 (357)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 192 (357)
+...+.+++|+| +++ ++++.++.|++||+.+++.+..+ .+...+.+++|+
T Consensus 72 -------------------------~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s 124 (391)
T 1l0q_A 72 -------------------------AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV--KTGKSPLGLALS 124 (391)
T ss_dssp -------------------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSSEEEEEEC
T ss_pred -------------------------CCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE--eCCCCcceEEEC
Confidence 233899999999 555 45556799999999998887776 345578999999
Q ss_pred cCCe-E-EEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEE-EEEecCCeEEEEecccCCce
Q 038568 193 DNGV-V-YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLL-FSGGCDRWIVVWERERDHRM 269 (357)
Q Consensus 193 ~~~~-l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~ 269 (357)
|++. + ++++.++.|++||++ ..+....+..+ ..+.+++|+|++++| ++++.++.|++||+++++..
T Consensus 125 ~dg~~l~~~~~~~~~v~~~d~~----------~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 125 PDGKKLYVTNNGDKTVSVINTV----------TKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETT----------TTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECC----------CCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 9984 5 688889999999987 33444555544 456899999999877 57778999999999987643
Q ss_pred eeeeeccCCccceEEEeecCc--eEEEec---CCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEE
Q 038568 270 VFAEALWGHTGALLCLINVGD--LLASGS---ADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSI 344 (357)
Q Consensus 270 ~~~~~~~~~~~~v~~~~~~~~--~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l 344 (357)
... .+...+.+++++++ +|++++ .++.|++||+.++ +.+..+..|. .+.+++|+|+++ +|
T Consensus 194 ~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~---~~~~~~~~~~-~~~~~~~s~dg~-------~l 258 (391)
T 1l0q_A 194 DTV----KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN---KITARIPVGP-DPAGIAVTPDGK-------KV 258 (391)
T ss_dssp EEE----ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT---EEEEEEECCS-SEEEEEECTTSS-------EE
T ss_pred EEE----ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC---eEEEEEecCC-CccEEEEccCCC-------EE
Confidence 222 24557788888766 777776 6899999999987 4556666655 478999999997 55
Q ss_pred -EEcCCCCeEEecC
Q 038568 345 -GSGSLNGEIKVWD 357 (357)
Q Consensus 345 -~s~~~dg~v~~wd 357 (357)
++++.|+.|++||
T Consensus 259 ~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 259 YVALSFXNTVSVID 272 (391)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEE
Confidence 7889999999997
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.6e-32 Score=227.31 Aligned_cols=241 Identities=11% Similarity=0.122 Sum_probs=170.7
Q ss_pred EEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEE
Q 038568 52 VFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVT 129 (357)
Q Consensus 52 iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (357)
||++ .+.+++..+.. |...|++++|+|++ |++|+.+ .+++|++...+.....
T Consensus 3 i~s~-~~~~~~~~~~~---h~~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~--------------------- 56 (355)
T 3vu4_A 3 LGSM-ITRNPIVPENH---VSNPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQ--------------------- 56 (355)
T ss_dssp --------------------CCCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEE---------------------
T ss_pred cccc-cccCCcccccc---CCCceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeee---------------------
Confidence 5666 66667766776 99999999999998 6666655 5899998866433221
Q ss_pred EecccccccccccccEEEEEEec--CeE-EEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeE
Q 038568 130 VRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRI 206 (357)
Q Consensus 130 ~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i 206 (357)
+...+..+.+.+ +.+ ++++.|++|++||+.+++++..+ .+...|.++.++++..+++ .++.|
T Consensus 57 -----------~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~--~~~~~v~~v~~~~~~~~~~--~~~~i 121 (355)
T 3vu4_A 57 -----------EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI--KVDAPVKDLFLSREFIVVS--YGDVI 121 (355)
T ss_dssp -----------ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE--ECSSCEEEEEECSSEEEEE--ETTEE
T ss_pred -----------ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE--ECCCceEEEEEcCCEEEEE--EcCEE
Confidence 112355566665 555 67888899999999999988887 4677999999998754333 47899
Q ss_pred EEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEE--EecCCeEEEEecccCCce------------ee-
Q 038568 207 RVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS--GGCDRWIVVWERERDHRM------------VF- 271 (357)
Q Consensus 207 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~vwd~~~~~~~------------~~- 271 (357)
++||+... .+.+..+.. +...+++++ .++++ |+.||.|++||++++... .+
T Consensus 122 ~i~d~~~~---------~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~ 187 (355)
T 3vu4_A 122 SVFKFGNP---------WKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGK 187 (355)
T ss_dssp EEEESSTT---------CCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------C
T ss_pred EEEECCCC---------ceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcc
Confidence 99999821 022222222 344566676 56666 588999999999875411 11
Q ss_pred eeeccCCccceEEEeecCc--eEEEecCCCe-EEEeeCCCCcceeeeeeec-C-CcCceEEEEEeeCCCCCCCCeEEEEE
Q 038568 272 AEALWGHTGALLCLINVGD--LLASGSADRT-VRIWQRGKENCYRCMAFLE-G-HEKPVKSLVAISSSSSASNGIVSIGS 346 (357)
Q Consensus 272 ~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~-i~vw~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~~~~~~~l~s 346 (357)
...+.+|...|.+++|+++ +|++|+.|++ |++||++++ +++..+. + |..+|++++|+|+++ +|++
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~---~~~~~~~~g~h~~~v~~~~~s~~~~-------~l~s 257 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG---VLVREFRRGLDRADVVDMKWSTDGS-------KLAV 257 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC---CEEEEEECTTCCSCEEEEEECTTSC-------EEEE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC---cEEEEEEcCCCCCcEEEEEECCCCC-------EEEE
Confidence 4567889999999999887 9999999998 999999987 5566676 5 999999999999998 9999
Q ss_pred cCCCCeEEecC
Q 038568 347 GSLNGEIKVWD 357 (357)
Q Consensus 347 ~~~dg~v~~wd 357 (357)
++.|++|++||
T Consensus 258 ~s~d~~v~iw~ 268 (355)
T 3vu4_A 258 VSDKWTLHVFE 268 (355)
T ss_dssp EETTCEEEEEE
T ss_pred EECCCEEEEEE
Confidence 99999999997
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-32 Score=229.03 Aligned_cols=220 Identities=10% Similarity=0.009 Sum_probs=169.6
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeE
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSF 164 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 164 (357)
|++|+.||+|++||+.+++....+. ...|.++.++|. +++++.|++|
T Consensus 51 l~sg~~Dg~v~iwd~~~~~~~~~~~--------------------------------~~~v~~~~~~~~-~~s~s~D~~i 97 (343)
T 3lrv_A 51 CMCRCEDGALHFTQLKDSKTITTIT--------------------------------TPNPRTGGEHPA-IISRGPCNRL 97 (343)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEE--------------------------------EECCCTTCCCCS-EEEECSTTEE
T ss_pred EEEECCCCcEEEEECCCCcEEEEEe--------------------------------cCCceeeeeCCc-eEEecCCCeE
Confidence 9999999999999999887655443 234556666777 8999999999
Q ss_pred EEEEcC---------cchhhhhccccccccEEEEEEec--CC-eEEEEeCCCeEEEEEccccccccccccceeeeeEe-e
Q 038568 165 KIWNAS---------NYKCLESVNKAHEDAVNAVVVSD--NG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL-V 231 (357)
Q Consensus 165 ~iwd~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~ 231 (357)
++|+.. +++.+..+...|...|.+++++| ++ ++++++.||.|++||++ ........ .
T Consensus 98 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~----------~~~~~~~~~~ 167 (343)
T 3lrv_A 98 LLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYE----------DDSQYIVHSA 167 (343)
T ss_dssp EEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESS----------SSCEEEEECC
T ss_pred EEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECC----------CCcEEEEEec
Confidence 999765 34434444346668899999999 87 69999999999999998 22333333 3
Q ss_pred ccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccC-CccceEEEeecCc--eEEEecCCCeEEEeeCCC
Q 038568 232 KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWG-HTGALLCLINVGD--LLASGSADRTVRIWQRGK 308 (357)
Q Consensus 232 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~ 308 (357)
.+...+.+++|+|++.+|++|+.||.|++||+++++.. ...+.. |..+|.+++|+++ +|++++ |+.|++||+++
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~ 244 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA--SSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK 244 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC--CEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC--ccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC
Confidence 45567999999999999999999999999999988753 134455 9999999999887 888888 55999999998
Q ss_pred CcceeeeeeecCCcCceE--EEEEeeCCCCCCCCeEEEEEcCC-CCeEEecC
Q 038568 309 ENCYRCMAFLEGHEKPVK--SLVAISSSSSASNGIVSIGSGSL-NGEIKVWD 357 (357)
Q Consensus 309 ~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~~~~~~~l~s~~~-dg~v~~wd 357 (357)
++....+..+..|..++. +++|+|+++ +|++++. |+.|++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGK-------NMIAYSNESNSLTIYK 289 (343)
T ss_dssp STTCBSSCCCBC-----CCEEEEECTTSS-------EEEEEETTTTEEEEEE
T ss_pred CCcceeecccccccccccceEEEECCCCC-------EEEEecCCCCcEEEEE
Confidence 754444444444555555 699999998 9999887 99999995
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=234.64 Aligned_cols=249 Identities=10% Similarity=0.103 Sum_probs=191.4
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCC--CCceEEEEEecCc--eEEeecCCeEEEEecC
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSS--SGSVKSITFHITK--IFTAHQDCKIRVWKIT 100 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~ 100 (357)
|...|.+++|+ |++||+++.| .|+|||. +. .+..+.. ..+ ...|.+++|+|++ |++|+.||+|++||+.
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~-~~--~l~~l~~-~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKD-NK--MLTNLDS-KGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEET-TE--EEEECCC-SSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeC-Cc--eeeeccC-CCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 78899999999 9999999999 9999997 54 4444431 101 2369999999998 9999999999999998
Q ss_pred Ccccee----eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhh
Q 038568 101 ASRQHQ----LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCL 175 (357)
Q Consensus 101 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~ 175 (357)
++.... .+..+. ....+|...|.+++|+| . +++++.|++|++||+..++..
T Consensus 160 ~~~l~~~~~i~l~ti~-----------------------~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 160 KNSENTPEFYFESSIR-----------------------LSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp CCTTTCCCCEEEEEEE-----------------------CSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSC
T ss_pred CCccccccceeeeeee-----------------------cccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccc
Confidence 865311 122211 00127889999999999 7 999999999999999887743
Q ss_pred ---hhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEE--ecCCCEEE
Q 038568 176 ---ESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALAL--NGDGSLLF 250 (357)
Q Consensus 176 ---~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~ 250 (357)
.++...|...|.+++|+ ++.|++++ ++.|++||+. .........+|...|..++| +|++..|+
T Consensus 216 ~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~----------~~~~~~~~~gh~~~V~~va~~~s~d~~~La 283 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLK----------NYSISSLKTGSLENFHIIPLNHEKESTILL 283 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETT----------TTEEEEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred cceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECC----------CCeEEEEEcCCCceEEEEEeeeCCCCCEEE
Confidence 23424678899999999 55788887 6999999987 23332333379999999999 99999999
Q ss_pred EEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEE
Q 038568 251 SGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVA 330 (357)
Q Consensus 251 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~ 330 (357)
+++.||+ ++|..+. ++++++..++++.|+++++|+...+. +..+.+ ...|.+++|
T Consensus 284 ~a~edG~-klw~~d~-------------------~~~spd~~l~a~~d~~v~lW~~~g~~----l~~~~~-~~~I~~va~ 338 (588)
T 2j04_A 284 MSNKTSY-KVLLEDE-------------------LHVTADNIIAPYLEKKFKKWSTIWNE----FNNYET-TLVIHGISL 338 (588)
T ss_dssp ECSSCEE-EEEESSS-------------------EEEECCCSSHHHHHHHHHHTTTTTTS----SSSSCC-EEEEEEEEE
T ss_pred EEcCCCC-EEEeecc-------------------EEECCCceEEEEcCCEEEEEECCCCc----eeeecc-ceEEEEEEE
Confidence 9999999 9998871 34555533333349999999986542 334444 678999999
Q ss_pred eeCCCCCCCCeEEEEEcC
Q 038568 331 ISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 331 ~~~~~~~~~~~~~l~s~~ 348 (357)
+|++. .+|+++
T Consensus 339 SPdG~-------~lA~~~ 349 (588)
T 2j04_A 339 SPDGY-------SIAIVY 349 (588)
T ss_dssp CTTSS-------EEEEEE
T ss_pred CCCCC-------EEEEEE
Confidence 99998 888876
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2e-31 Score=225.96 Aligned_cols=241 Identities=10% Similarity=0.023 Sum_probs=162.3
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccc-----cceeccccCCCCceEEEEEec--------Cc--eEEee
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSH-----VDTFSNDLSSSGSVKSITFHI--------TK--IFTAH 89 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~-----~~~~~~~~~~~~~v~~l~~~~--------~~--l~~~~ 89 (357)
|...+....++ +.+||+|+.| +|+|||. +.++. +..+.+ |.+.|++++|+| ++ |++++
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~-~~~~~~~~~~~~~~~g---H~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIIT-KNETIITQHVLGGKSG---HHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEE-ETTEEEEEEEECTTTS---CSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEEC-CCCccceeeeecccCC---CCCceEEEEEccccccccCCCCCEEEEEE
Confidence 33333333444 6789999999 9999999 66543 334566 999999999997 43 99999
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEE
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKI 166 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i 166 (357)
.|++|+|||+.++....... .|...+.+++|+| .+|++++.||+|++
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~------------------------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~ 213 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGY------------------------------PLSSPGISVQFRPSNPNQLIVGERNGNIRI 213 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEE------------------------------ECSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCeEEEEECCCCceeeeec------------------------------CCCCCcEEEEECCCCCceEEecCCCCEEEE
Confidence 99999999998765433322 7888999999999 57999999999999
Q ss_pred EEcCcchhhhhc------------------------cccccccEEEEEEe-cCC-eEEEEeCCCeEEEEEcccccccccc
Q 038568 167 WNASNYKCLESV------------------------NKAHEDAVNAVVVS-DNG-VVYTGSADGRIRVWERSVVDHNKER 220 (357)
Q Consensus 167 wd~~~~~~~~~~------------------------~~~~~~~v~~~~~~-~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 220 (357)
||+++++..... ...|...+.++.|. +++ ++++++.|+.+++||+.........
T Consensus 214 wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 214 FDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp EETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred EECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence 999887643322 13466778889987 677 6999999999999998732211000
Q ss_pred cc---------ceeeeeEeeccccceeEEEEec--CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC
Q 038568 221 KS---------RHMLVTTLVKHRSTVNALALNG--DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG 289 (357)
Q Consensus 221 ~~---------~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 289 (357)
.. ..........+.. .....++| ++.++++|+.||.|++||+.+++.. ..+.+|..+|.+++|+|
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~---~~~~~~~~~V~svafsp 369 (393)
T 4gq1_A 294 SDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN---SIPIQLGMPIVDFCWHQ 369 (393)
T ss_dssp ----------CCSCSEEEECSSCC-SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC---EEEEECSSCEEEEEECT
T ss_pred eeecCccccEEEccccccccccCc-ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE---EEecCCCCcEEEEEEcC
Confidence 00 0000111111122 22233444 4446778889999999999988743 34456888999999998
Q ss_pred c--eEEEecCCCeEEEeeCC
Q 038568 290 D--LLASGSADRTVRIWQRG 307 (357)
Q Consensus 290 ~--~l~~~~~dg~i~vw~~~ 307 (357)
+ +||+++.+| +.+|.+.
T Consensus 370 dG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 370 DGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp TSSEEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEeCCC-eEEEEEe
Confidence 7 999998776 5566543
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=8.7e-29 Score=210.04 Aligned_cols=286 Identities=12% Similarity=0.116 Sum_probs=208.7
Q ss_pred ccccceecccccCCCCCCCccceeEEEEe--cceE-EEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-
Q 038568 10 EAFKHHCIASLKIPSPDPHHMIISCLAVH--NSLL-YAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK- 84 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l-~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~- 84 (357)
+....++++.+.. | ..+.+++|+ +++| ++++.| .|++||+ .+++.+..+.. ...+.+++|+|++
T Consensus 18 d~~~~~~~~~~~~-----~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~-~~~~~~~~~~~----~~~v~~~~~spdg~ 86 (391)
T 1l0q_A 18 DVTSNKVTATIPV-----G-SNPMGAVISPDGTKVYVANAHSNDVSIIDT-ATNNVIATVPA----GSSPQGVAVSPDGK 86 (391)
T ss_dssp ETTTTEEEEEEEC-----S-SSEEEEEECTTSSEEEEEEGGGTEEEEEET-TTTEEEEEEEC----SSSEEEEEECTTSS
T ss_pred ECCCCeEEEEeec-----C-CCcceEEECCCCCEEEEECCCCCeEEEEEC-CCCeEEEEEEC----CCCccceEECCCCC
Confidence 3345677777773 4 458999999 7766 667688 9999999 88888888874 4499999999987
Q ss_pred -e-EEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeE-EEEe
Q 038568 85 -I-FTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVS 159 (357)
Q Consensus 85 -l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~ 159 (357)
| ++++.++.|++||+.+++....+ .+...+.+++|+| +.+ ++++
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~-------------------------------~~~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTV-------------------------------KTGKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEE-------------------------------ECSSSEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEE-------------------------------eCCCCcceEEECCCCCEEEEEeC
Confidence 5 45567799999999987654433 2334678999999 555 6888
Q ss_pred cCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eE-EEEeCCCeEEEEEccccccccccccceeeeeEeeccccce
Q 038568 160 WDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VV-YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV 237 (357)
Q Consensus 160 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (357)
.++.|++||+.+++.+..+ . ....+.+++|+|++ .+ ++++.++.|++||++ ..+....+. +...+
T Consensus 136 ~~~~v~~~d~~~~~~~~~~-~-~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~----------~~~~~~~~~-~~~~~ 202 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTV-S-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTV----------TNSVIDTVK-VEAAP 202 (391)
T ss_dssp TTTEEEEEETTTTEEEEEE-E-CCSSEEEEEECTTSSEEEEEETTTTEEEEEETT----------TTEEEEEEE-CSSEE
T ss_pred CCCEEEEEECCCCcEEEEE-e-cCCCcceEEECCCCCEEEEEeCCCCEEEEEECC----------CCeEEEEEe-cCCCc
Confidence 8999999999998888777 3 34567999999999 44 677889999999997 233333333 55678
Q ss_pred eEEEEecCCCEEEEEe---cCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eE-EEecCCCeEEEeeCCCCcc
Q 038568 238 NALALNGDGSLLFSGG---CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LL-ASGSADRTVRIWQRGKENC 311 (357)
Q Consensus 238 ~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l-~~~~~dg~i~vw~~~~~~~ 311 (357)
.+++|+|++++|++++ .++.|++||+++++.. ..+..+. .+.+++++++ +| ++++.|+.|++||+.++
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~-- 276 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT---ARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATN-- 276 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE---EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT--
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE---EEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCC--
Confidence 9999999999999888 6899999999987643 3333343 4677788765 55 77789999999999987
Q ss_pred eeeeeeecCCcCceE---EEE------------EeeCCCCC---CCCeEEEEEcCCCCeEEecC
Q 038568 312 YRCMAFLEGHEKPVK---SLV------------AISSSSSA---SNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 312 ~~~~~~~~~h~~~v~---~~~------------~~~~~~~~---~~~~~~l~s~~~dg~v~~wd 357 (357)
+.+..+..|..+.. .+. |+.+.... ......+...+.|..+++||
T Consensus 277 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 339 (391)
T 1l0q_A 277 -TITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWD 339 (391)
T ss_dssp -EEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEE
T ss_pred -cEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEE
Confidence 55555555544421 122 22221100 00013577788899999996
No 124
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=9.4e-30 Score=212.34 Aligned_cols=268 Identities=15% Similarity=0.184 Sum_probs=183.4
Q ss_pred ceecccccCCCCCCCccceeEEEEe----cceEEEeeCC-ceEEEeccCCc---------cccceeccccCCCCceEEEE
Q 038568 14 HHCIASLKIPSPDPHHMIISCLAVH----NSLLYAASLN-EINVFDLISDY---------SHVDTFSNDLSSSGSVKSIT 79 (357)
Q Consensus 14 ~~~~~~~~~~~g~~h~~~i~~~~~s----~~~l~t~~~d-~i~iw~~~~~~---------~~~~~~~~~~~~~~~v~~l~ 79 (357)
.++...+.+ |...|++++|+ +++|++|+.| .|++||+ .++ +.+..+.. |...|.+++
T Consensus 47 ~~~~~~~~~-----~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~-~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~ 117 (351)
T 3f3f_A 47 WELSDSWRA-----HDSSIVAIDWASPEYGRIIASASYDKTVKLWEE-DPDQEECSGRRWNKLCTLND---SKGSLYSVK 117 (351)
T ss_dssp EEEEEEEEC-----CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE-CTTSCTTSSCSEEEEEEECC---CSSCEEEEE
T ss_pred ceecceecc-----CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec-CCCcccccccCcceeeeecc---cCCceeEEE
Confidence 356667775 99999999997 6799999999 9999999 665 44666666 999999999
Q ss_pred EecC--c--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---
Q 038568 80 FHIT--K--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--- 152 (357)
Q Consensus 80 ~~~~--~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 152 (357)
|+|+ + |++++.||.|++||+.+++....+....... ........|...+.+++|+|
T Consensus 118 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~p~~~ 180 (351)
T 3f3f_A 118 FAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK-----------------VLSIPPANHLQSDFCLSWCPSRF 180 (351)
T ss_dssp ECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE-----------------SCSCCCSSCSCCCEEEEECCCSS
T ss_pred EcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc-----------------ccccccCCcccceeEEEeccCCC
Confidence 9997 5 9999999999999998876544332110000 00001126778899999987
Q ss_pred --CeEEEEecCCeEEEEEcCcchh--hhhccccccccEEEEEEecCC-----eEEEEeCCCeEEEEEccccccccccccc
Q 038568 153 --GLMYSVSWDRSFKIWNASNYKC--LESVNKAHEDAVNAVVVSDNG-----VVYTGSADGRIRVWERSVVDHNKERKSR 223 (357)
Q Consensus 153 --~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 223 (357)
.++++++.++.+.+|+...++. +..+ ..|...|.+++|+|++ .|++++.||.|++||++..
T Consensus 181 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~--------- 250 (351)
T 3f3f_A 181 SPEKLAVSALEQAIIYQRGKDGKLHVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK--------- 250 (351)
T ss_dssp SCCEEEEEETTEEEEEEECTTSCEEEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC---------
T ss_pred CCcEEEEecCCCcEEEEccCCCceeeeeec-CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC---------
Confidence 7899999999998888776654 5555 6789999999999996 5999999999999999821
Q ss_pred eeeeeEeeccccceeEEEEecCCCEEEEEe----cCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecC
Q 038568 224 HMLVTTLVKHRSTVNALALNGDGSLLFSGG----CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSA 297 (357)
Q Consensus 224 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~ 297 (357)
........+..........+....+..+. ....+.+|+....+ ....+.+|...|.+++|+++ +|++++.
T Consensus 251 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 326 (351)
T 3f3f_A 251 -LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVE---LLSEHDDHNGEVWSVSWNLTGTILSSAGD 326 (351)
T ss_dssp -C---------------------------------------CCSEEEE---EEEEECTTSSCEEEEEECSSSCCEEEEET
T ss_pred -cCccccCCcccceeccCCCcccccccccccccccceeeeeccccccc---EEEEEecccccEEEEEEcCCCCEEEEecC
Confidence 11111222222333333344333333333 33445555544433 56677889999999999876 9999999
Q ss_pred CCeEEEeeCCCCcceeeeeeecCC
Q 038568 298 DRTVRIWQRGKENCYRCMAFLEGH 321 (357)
Q Consensus 298 dg~i~vw~~~~~~~~~~~~~~~~h 321 (357)
||.|++|++.+++..+++..+..|
T Consensus 327 dg~v~iw~~~~~~~~~~~~~~~~~ 350 (351)
T 3f3f_A 327 DGKVRLWKATYSNEFKCMSVITAQ 350 (351)
T ss_dssp TSCEEEEEECTTSCEEEEEEEC--
T ss_pred CCcEEEEecCcCcchhheeehccc
Confidence 999999999998777777777655
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=3.6e-28 Score=209.06 Aligned_cols=252 Identities=12% Similarity=0.149 Sum_probs=192.0
Q ss_pred ceEEEeccCC--c--cccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeee
Q 038568 49 EINVFDLISD--Y--SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSV 122 (357)
Q Consensus 49 ~i~iw~~~~~--~--~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 122 (357)
.+.||.+ +. + +.+..+. ....+.+++|+|++ +++++.++.|++||+.+++.......
T Consensus 100 ~~~l~~~-d~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~------------ 162 (433)
T 3bws_A 100 NEKLIAL-DKEGITHRFISRFK----TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPP------------ 162 (433)
T ss_dssp TTCEEEC-CBTTCSEEEEEEEE----CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCC------------
T ss_pred ceEEEEE-CCCCCcceEEEEEc----CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCc------------
Confidence 4566666 33 3 4445555 34556699999966 77777889999999998765432211
Q ss_pred cCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eE-E
Q 038568 123 LPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VV-Y 198 (357)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~ 198 (357)
..+.+|...|.+++|++ .++++++.|+.|++||+++++.+..+ ..+...+.+++|+|++ .+ +
T Consensus 163 -------------~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 228 (433)
T 3bws_A 163 -------------EKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKILLYDPIRDLVYC 228 (433)
T ss_dssp -------------HHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEEEEEETTTTEEEE
T ss_pred -------------ccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeEEEEcCCCCEEEE
Confidence 11237888999999988 78889999999999999998888887 6788899999999998 45 5
Q ss_pred EEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe--------cCCeEEEEecccCCcee
Q 038568 199 TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG--------CDRWIVVWERERDHRMV 270 (357)
Q Consensus 199 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~vwd~~~~~~~~ 270 (357)
+++.++.|++||++ ..+....+.. ...+.+++|+|++++|++++ .|+.|++||+++++...
T Consensus 229 ~~~~~~~i~~~d~~----------~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 229 SNWISEDISVIDRK----------TKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp EETTTTEEEEEETT----------TTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE
T ss_pred EecCCCcEEEEECC----------CCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe
Confidence 56689999999997 2334444443 45689999999999999888 48899999999776432
Q ss_pred eeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEc
Q 038568 271 FAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSG 347 (357)
Q Consensus 271 ~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~ 347 (357)
.. .|...+.+++|+++ ++++++.|+.|++||+.++ +.+..+. +...+.+++|+|+++ +|+++
T Consensus 298 ~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~---~~~~~~~-~~~~~~~~~~s~dg~-------~l~~~ 362 (433)
T 3bws_A 298 TI----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK---KVQKSIP-VFDKPNTIALSPDGK-------YLYVS 362 (433)
T ss_dssp EE----EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT---EEEEEEE-CSSSEEEEEECTTSS-------EEEEE
T ss_pred ec----cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC---cEEEEec-CCCCCCeEEEcCCCC-------EEEEE
Confidence 22 34556778888765 5677799999999999987 4444444 667899999999998 77766
Q ss_pred CC---------------CCeEEecC
Q 038568 348 SL---------------NGEIKVWD 357 (357)
Q Consensus 348 ~~---------------dg~v~~wd 357 (357)
+. ||.|++||
T Consensus 363 ~~~~~~~~~~~~~~g~~dg~v~~~d 387 (433)
T 3bws_A 363 CRGPNHPTEGYLKKGLVLGKVYVID 387 (433)
T ss_dssp ECCCCCTTTCTTSCCSSCCEEEEEE
T ss_pred ecCCCccccccccccccceEEEEEE
Confidence 65 67999996
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.7e-28 Score=195.40 Aligned_cols=175 Identities=13% Similarity=0.077 Sum_probs=131.1
Q ss_pred C-ceEEEeccCCccccceeccccCCCCceEEEEEec---Cc--eEEeecCCeEEEEecCCccceeeeeecCccccceeee
Q 038568 48 N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHI---TK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRS 121 (357)
Q Consensus 48 d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 121 (357)
| .|++|++.++++.+..+.+ |...++.++|++ ++ |++++.|++|+|||+.+++....+....
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~---~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~--------- 223 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFL---MPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD--------- 223 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEE---CCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---------
T ss_pred CCcEEEEEECCCCceeeeecc---CCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC---------
Confidence 7 9999999555777888877 888898999988 33 9999999999999999998766654211
Q ss_pred ecCCCeEEEecccccccccccccEEEEEEec--Ce------------EEEEecCCeEEEEEcCcchhhhhc----ccccc
Q 038568 122 VLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GL------------MYSVSWDRSFKIWNASNYKCLESV----NKAHE 183 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~------------l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~ 183 (357)
.+...+.+++|+| .+ +++|+.|++|++||..+++.+..+ ..+|.
T Consensus 224 ------------------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~ 285 (356)
T 2w18_A 224 ------------------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQA 285 (356)
T ss_dssp ---------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCC
T ss_pred ------------------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCc
Confidence 1234566667777 33 467889999999999998876544 23555
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeecccccee-EEEEecCCCEEEEEecCCeEEEEe
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN-ALALNGDGSLLFSGGCDRWIVVWE 262 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd 262 (357)
..+.+..++ ...+++++.|++|++||++ ..+.+..+.+|...+. +++|+|+|++|++|+.|++|+|||
T Consensus 286 ~~~lsg~~s-g~~lASgS~DgTIkIWDl~----------tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 286 GRFLEGDVK-DHCAAAILTSGTIAIWDLL----------LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp CCEEEEEEE-TTEEEEEETTSCEEEEETT----------TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ceeEccccC-CCEEEEEcCCCcEEEEECC----------CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 555444444 2268999999999999998 5667788888887665 589999999999999999999998
Q ss_pred c
Q 038568 263 R 263 (357)
Q Consensus 263 ~ 263 (357)
+
T Consensus 355 ~ 355 (356)
T 2w18_A 355 Y 355 (356)
T ss_dssp E
T ss_pred C
Confidence 5
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=3.5e-25 Score=194.27 Aligned_cols=300 Identities=11% Similarity=0.081 Sum_probs=210.9
Q ss_pred ccccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEecc-CCccccceeccccCCCCceEEEEEec---
Q 038568 10 EAFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLI-SDYSHVDTFSNDLSSSGSVKSITFHI--- 82 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~-~~~~~~~~~~~~~~~~~~v~~l~~~~--- 82 (357)
+..+++++.++.. | |. +.+++|+ |++|++++.| .|++||+. .+++.+.++. +...+..++|+|
T Consensus 165 D~~t~~~~~~i~~--g--~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~----~g~~p~~va~sp~~~ 234 (543)
T 1nir_A 165 DGDSKKIVKVIDT--G--YA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK----IGIEARSVESSKFKG 234 (543)
T ss_dssp ETTTCCEEEEEEC--S--TT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE----CCSEEEEEEECCSTT
T ss_pred ECCCceEEEEEec--C--cc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe----cCCCcceEEeCCCcC
Confidence 3445677777773 2 33 8899999 9999999999 99999993 2466677776 556789999999
Q ss_pred -Cc--eEEee-cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccccccccccc-ccEEEEEEec---Ce
Q 038568 83 -TK--IFTAH-QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHW-DAVSDLVVKQ---GL 154 (357)
Q Consensus 83 -~~--l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~---~~ 154 (357)
++ +++++ .+++|.+||..+.+....+........ ....|. ..+..+.+++ .+
T Consensus 235 ~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~--------------------~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 235 YEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD--------------------TQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp CTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS--------------------SCCEESCCCEEEEEECSSSSEE
T ss_pred CCCCEEEEEEccCCeEEEEeccccccceeecccCcccC--------------------ccccccCCceEEEEECCCCCEE
Confidence 86 66666 589999999988876655543110000 000132 3788999998 56
Q ss_pred EEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-EE-EEeCCCeEEEEEccccccccccccceeeeeEeec
Q 038568 155 MYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VY-TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK 232 (357)
Q Consensus 155 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
+++...++.|.+||+.+.+.+......+...+..+.|+|+++ ++ ++..+++|.+||.. ..++...+..
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~----------tg~l~~~i~~ 364 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK----------DRRLSALVDV 364 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT----------TTEEEEEEEC
T ss_pred EEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECC----------CCeEEEeecc
Confidence 778888999999999887655421124566788899999994 54 45568999999998 3344444442
Q ss_pred ----cccceeEEEEecC-CCEEEEEe-cCCeEEEEecccCCc----eeeeeeccCCccceEEEeecCc--eEEEec----
Q 038568 233 ----HRSTVNALALNGD-GSLLFSGG-CDRWIVVWERERDHR----MVFAEALWGHTGALLCLINVGD--LLASGS---- 296 (357)
Q Consensus 233 ----~~~~v~~~~~~~~-~~~l~~~~-~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~--~l~~~~---- 296 (357)
|.+....+ ++|+ +..++++. .|++|.+||+.+... ...+..+.+|...+..+.++|+ +|++++
T Consensus 365 g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 365 GKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp SSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCS
T ss_pred CCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCC
Confidence 44333333 4776 55666665 589999999987211 3356677778777777888776 888876
Q ss_pred ---CCCeEEEeeCCCCcce-eeeee-----ecCCcCceEEEEEeeCCCCCCCCeEEEEEc-----CCCCeEEecC
Q 038568 297 ---ADRTVRIWQRGKENCY-RCMAF-----LEGHEKPVKSLVAISSSSSASNGIVSIGSG-----SLNGEIKVWD 357 (357)
Q Consensus 297 ---~dg~i~vw~~~~~~~~-~~~~~-----~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~-----~~dg~v~~wd 357 (357)
.+++|.+||+.+.+.. +.+.. +..+...+..+.|+|+++ .|+.+ +.|+.|.|||
T Consensus 444 ~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~-------~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 444 DARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD-------EVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp SHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS-------EEEEEEECCTTSCCEEEEEE
T ss_pred CcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC-------EEEEEeecCCCCCCeEEEEE
Confidence 2779999999987533 22111 245678899999999998 55543 3589999997
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.5e-25 Score=190.84 Aligned_cols=250 Identities=9% Similarity=-0.004 Sum_probs=187.6
Q ss_pred CccceeEEEEe----------------cceEEEeeC-------CceEEEeccCCccccceeccccCCCCceEEEEEecCc
Q 038568 28 HHMIISCLAVH----------------NSLLYAASL-------NEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK 84 (357)
Q Consensus 28 h~~~i~~~~~s----------------~~~l~t~~~-------d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 84 (357)
|...+..++++ +..++.++. ..|++||+ +. .....+.. |...|.+++|+|++
T Consensus 116 ~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~-~g-~~~~~l~~---~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 116 NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDY-DG-YNQFVVHR---SPQPLMSPAWSPDG 190 (415)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEET-TS-CSCEEEEE---ESSCEEEEEECTTS
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcC-CC-CCCEEEeC---CCCcceeeEEcCCC
Confidence 77777776654 445655553 28999999 64 55677776 89999999999997
Q ss_pred --eEEeecCC---eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEE-
Q 038568 85 --IFTAHQDC---KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMY- 156 (357)
Q Consensus 85 --l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~- 156 (357)
|++++.++ .|++||+.+++... +. .|...+.+++|+| +.|+
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~~-l~------------------------------~~~~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVRQ-VA------------------------------SFPRHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEEE-EE------------------------------CCSSCEEEEEECTTSSEEEE
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEEE-ee------------------------------cCCCcccCEEEcCCCCEEEE
Confidence 88888775 99999999876432 21 5667899999999 5566
Q ss_pred EEecCCe--EEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeC-CC--eEEEEEccccccccccccceeeeeEe
Q 038568 157 SVSWDRS--FKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSA-DG--RIRVWERSVVDHNKERKSRHMLVTTL 230 (357)
Q Consensus 157 ~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~ 230 (357)
+++.++. |++||+.+++. ..+ ..+...+.+++|+|++. |++++. ++ .|.+||+. . .. ...+
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~-~~l-~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~------~----~~-~~~l 306 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQI-RQV-TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN------G----GA-PQRI 306 (415)
T ss_dssp EECTTSSCEEEEEETTTCCE-EEC-CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT------S----SC-CEEC
T ss_pred EEecCCCceEEEEECCCCCE-EeC-cCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC------C----CC-EEEE
Confidence 6666654 99999988765 344 56778899999999994 776665 45 67777876 1 11 2334
Q ss_pred eccccceeEEEEecCCCEEEEEecC---CeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCC---eEE
Q 038568 231 VKHRSTVNALALNGDGSLLFSGGCD---RWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADR---TVR 302 (357)
Q Consensus 231 ~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg---~i~ 302 (357)
..+...+.+++|+|+|++|++++.+ ..|++||+.+++.. .+..+. .+.+++|+|+ +|++++.++ .|+
T Consensus 307 ~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~----~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~ 381 (415)
T 2hqs_A 307 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ----VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLN 381 (415)
T ss_dssp CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE----ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE----EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEE
Confidence 4466788999999999999988764 58999999987642 233443 7788888876 787777766 899
Q ss_pred EeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 303 IWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 303 vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
+||+.. .....+..|.+.|.+++|+|...
T Consensus 382 ~~d~~g----~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 382 LVSTDG----RFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEETTS----CCEEECCCSSSEEEEEEECCCCC
T ss_pred EEECCC----CcEEEeeCCCCCCcCCccccccc
Confidence 999975 34667788999999999999753
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=5.8e-26 Score=193.49 Aligned_cols=265 Identities=10% Similarity=0.019 Sum_probs=193.8
Q ss_pred ccceeEEEEe---cceEEEee--------CC-ceEEEec--cCCcccc--ceeccccCCCCceEEEEEec----------
Q 038568 29 HMIISCLAVH---NSLLYAAS--------LN-EINVFDL--ISDYSHV--DTFSNDLSSSGSVKSITFHI---------- 82 (357)
Q Consensus 29 ~~~i~~~~~s---~~~l~t~~--------~d-~i~iw~~--~~~~~~~--~~~~~~~~~~~~v~~l~~~~---------- 82 (357)
...+...+|+ .+++++|+ .+ .|+|||+ .. ++.+ ..+.+ |...+..+++.+
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~~~g 137 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAP-GTVLAQNSYKV---NKQWLRYAGHTASDEVFEKLTG 137 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSST-TCEEEEEEEEE---CGGGHHHHHHHHHHHHHHHHHS
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCC-CCEEeeeEEEc---ChhHHHHHHHHHHHHHHHHHcC
Confidence 3466677776 35676775 23 7999998 33 3444 44666 888888777764
Q ss_pred -----C-ceEEeecC------CeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE
Q 038568 83 -----T-KIFTAHQD------CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150 (357)
Q Consensus 83 -----~-~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 150 (357)
+ .++.++.+ +.|++||++... ...+. .|...+.+++|
T Consensus 138 ~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~------------------------------~~~~~v~~~~~ 186 (415)
T 2hqs_A 138 IKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVH------------------------------RSPQPLMSPAW 186 (415)
T ss_dssp SCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEE------------------------------EESSCEEEEEE
T ss_pred CCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEe------------------------------CCCCcceeeEE
Confidence 3 36666554 799999997543 22222 67889999999
Q ss_pred ec--CeEEEEecCC---eEEEEEcCcchhhhhccccccccEEEEEEecCCe-EE-EEeCCCe--EEEEEccccccccccc
Q 038568 151 KQ--GLMYSVSWDR---SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VY-TGSADGR--IRVWERSVVDHNKERK 221 (357)
Q Consensus 151 ~~--~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-~~~~d~~--i~i~d~~~~~~~~~~~ 221 (357)
+| +.|++++.++ .|++||+.+++... + ..+...+.+++|+|++. |+ +++.++. |++||++
T Consensus 187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l-~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~--------- 255 (415)
T 2hqs_A 187 SPDGSKLAYVTFESGRSALVIQTLANGAVRQ-V-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA--------- 255 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEE-E-ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT---------
T ss_pred cCCCCEEEEEEecCCCcEEEEEECCCCcEEE-e-ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC---------
Confidence 99 7899998875 99999999887653 4 46778899999999994 55 5665554 9999987
Q ss_pred cceeeeeEeeccccceeEEEEecCCCEEEEEec-CC--eEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEec
Q 038568 222 SRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC-DR--WIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGS 296 (357)
Q Consensus 222 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~ 296 (357)
..+ ...+..|...+.+++|+|+|++|++++. ++ .|++||+.+++. ..+..+...+.+++|+++ +|++++
T Consensus 256 -~~~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 256 -SGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP----QRITWEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp -TCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC----EECCCSSSEEEEEEECTTSSEEEEEE
T ss_pred -CCC-EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE----EEEecCCCcccCeEECCCCCEEEEEE
Confidence 122 2455667888999999999999888876 44 688889887653 233345667878888776 777776
Q ss_pred CC---CeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCC---eEEecC
Q 038568 297 AD---RTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNG---EIKVWD 357 (357)
Q Consensus 297 ~d---g~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg---~v~~wd 357 (357)
.+ ..|++||+.+++. ..+..+. .+.+++|+|+++ +|++++.|+ .|++||
T Consensus 330 ~~~g~~~i~~~d~~~~~~----~~l~~~~-~~~~~~~spdg~-------~l~~~s~~~~~~~l~~~d 384 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGGV----QVLSSTF-LDETPSLAPNGT-------MVIYSSSQGMGSVLNLVS 384 (415)
T ss_dssp ECSSCEEEEEEETTTCCE----EECCCSS-SCEEEEECTTSS-------EEEEEEEETTEEEEEEEE
T ss_pred CcCCceEEEEEECCCCCE----EEecCCC-CcCCeEEcCCCC-------EEEEEEcCCCccEEEEEE
Confidence 54 6899999998732 3344554 899999999998 888888776 788875
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=8.9e-25 Score=191.66 Aligned_cols=269 Identities=12% Similarity=0.168 Sum_probs=200.3
Q ss_pred Ee--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEec--CCccceeeee
Q 038568 37 VH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKI--TASRQHQLVS 109 (357)
Q Consensus 37 ~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~--~~~~~~~~~~ 109 (357)
|+ +.++++++.| .|.+||. .+++.+.++.. +. .+..++|+|++ |++++.|++|.+||+ .+++....+
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~-~t~~~~~~i~~---g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i- 218 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDG-DSKKIVKVIDT---GY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI- 218 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEET-TTCCEEEEEEC---ST-TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE-
T ss_pred cCCCCEEEEEEcCCCeEEEEEC-CCceEEEEEec---Cc-ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE-
Confidence 56 7788888888 9999999 89999998884 22 28999999997 999999999999999 665543333
Q ss_pred ecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec------CeEEEEec-CCeEEEEEcCcchhhhhcccc-
Q 038568 110 TLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ------GLMYSVSW-DRSFKIWNASNYKCLESVNKA- 181 (357)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~- 181 (357)
.+......++|+| +++++++. +++|.+||..+++++..+...
T Consensus 219 ------------------------------~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g 268 (543)
T 1nir_A 219 ------------------------------KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG 268 (543)
T ss_dssp ------------------------------ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE
T ss_pred ------------------------------ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccC
Confidence 2234578899985 57777774 899999999999888877321
Q ss_pred --------c-cccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEE
Q 038568 182 --------H-EDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLF 250 (357)
Q Consensus 182 --------~-~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 250 (357)
| ...+.++.++|++ .+++...++.|.+||+... .. .....+ .+...+..+.|+|++++++
T Consensus 269 ~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~------~~--l~~~~i-~~~~~~~~~~~spdg~~l~ 339 (543)
T 1nir_A 269 MTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI------DN--LTVTSI-GAAPFLHDGGWDSSHRYFM 339 (543)
T ss_dssp ECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS------SS--CEEEEE-ECCSSCCCEEECTTSCEEE
T ss_pred cccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC------Cc--ceeEEe-ccCcCccCceECCCCCEEE
Confidence 2 2378899999977 3777888999999998721 11 111222 3456688999999999876
Q ss_pred EEe-cCCeEEEEecccCCceeeeeec-cCCccceEEEee-c-CceEEEec-CCCeEEEeeCCCCc----ceeeeeeecCC
Q 038568 251 SGG-CDRWIVVWERERDHRMVFAEAL-WGHTGALLCLIN-V-GDLLASGS-ADRTVRIWQRGKEN----CYRCMAFLEGH 321 (357)
Q Consensus 251 ~~~-~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~-~-~~~l~~~~-~dg~i~vw~~~~~~----~~~~~~~~~~h 321 (357)
+++ .+++|.+||..+++....+..- ..|.+....+.. . +..++++. .|++|.+||+.+.. .++++..+.+|
T Consensus 340 va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 340 TAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred EEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 654 5889999999988754433321 125544444422 2 22667765 68999999998732 15788999999
Q ss_pred cCceEEEEEeeCCCCCCCCeEEEEEcC-------CCCeEEecC
Q 038568 322 EKPVKSLVAISSSSSASNGIVSIGSGS-------LNGEIKVWD 357 (357)
Q Consensus 322 ~~~v~~~~~~~~~~~~~~~~~~l~s~~-------~dg~v~~wd 357 (357)
...+..+.++|+++ +|++++ .+++|.+||
T Consensus 420 g~~~~~v~~~pdg~-------~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 420 GGGSLFIKTHPKSS-------HLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp CSCCCCEECCTTCC-------EEEECCTTCSSHHHHTCEEEEE
T ss_pred CCCceEEEcCCCCC-------cEEEecCCCCCcccCceEEEEE
Confidence 98999999999999 888887 277999997
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=2.9e-24 Score=178.82 Aligned_cols=268 Identities=10% Similarity=0.141 Sum_probs=176.5
Q ss_pred ceEEEe-eCC-ceEEEeccCCc--cccceeccccCCCCceEEEEEecCc--eEEeecC-CeEEEEecC--Cccceeeeee
Q 038568 40 SLLYAA-SLN-EINVFDLISDY--SHVDTFSNDLSSSGSVKSITFHITK--IFTAHQD-CKIRVWKIT--ASRQHQLVST 110 (357)
Q Consensus 40 ~~l~t~-~~d-~i~iw~~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d-~~i~vwd~~--~~~~~~~~~~ 110 (357)
++++++ +.+ .|++|++..++ +.+..+. +...+.+++|+|++ |++++.+ +.|.+|+++ +++. ..+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-~~~~~ 79 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVD----VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-TFAAE 79 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEE----CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-EEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEe----cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-eeccc
Confidence 344444 677 99999992222 2333333 77889999999987 7777766 999999997 4332 22221
Q ss_pred cCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-cCCeEEEEEc---Ccchhhhhccccccc
Q 038568 111 LPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-WDRSFKIWNA---SNYKCLESVNKAHED 184 (357)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~i~iwd~---~~~~~~~~~~~~~~~ 184 (357)
+ .....+..++|+| +++++++ .++.|.+||+ .+.+.+..+ ....
T Consensus 80 ~----------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~ 129 (343)
T 1ri6_A 80 S----------------------------ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV--EGLD 129 (343)
T ss_dssp E----------------------------ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--CCCT
T ss_pred c----------------------------ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc--cCCC
Confidence 1 1123678899999 5566555 4889999999 444444444 3344
Q ss_pred cEEEEEEecCC-eEEEEe-CCCeEEEEEccccccccccccceeeee--Eee-ccccceeEEEEecCCCEEEEEe-cCCeE
Q 038568 185 AVNAVVVSDNG-VVYTGS-ADGRIRVWERSVVDHNKERKSRHMLVT--TLV-KHRSTVNALALNGDGSLLFSGG-CDRWI 258 (357)
Q Consensus 185 ~v~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~i 258 (357)
.+.+++|+|++ ++++++ .++.|++||+... .. ..... ... .....+..++|+|+++++++++ .++.|
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~-----~~--~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i 202 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSDD-----GH--LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSV 202 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECTT-----SC--EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecCC-----Cc--eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEE
Confidence 68899999999 466666 8999999998720 11 11111 222 2345688899999999776554 78999
Q ss_pred EEEeccc--CCc--eeeeeecc-CC--ccceEEEeecCc--eEE-EecCCCeEEEeeCCC-CcceeeeeeecCCcCceEE
Q 038568 259 VVWERER--DHR--MVFAEALW-GH--TGALLCLINVGD--LLA-SGSADRTVRIWQRGK-ENCYRCMAFLEGHEKPVKS 327 (357)
Q Consensus 259 ~vwd~~~--~~~--~~~~~~~~-~~--~~~v~~~~~~~~--~l~-~~~~dg~i~vw~~~~-~~~~~~~~~~~~h~~~v~~ 327 (357)
.+|+++. ++. ........ ++ ...+..++|+++ +|+ ++..++.|++|++.. +...+.+..+..+.. +.+
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~ 281 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRG 281 (343)
T ss_dssp EEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCC
T ss_pred EEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cce
Confidence 9999964 321 11111111 11 234556777765 554 666899999999983 112345555555554 889
Q ss_pred EEEeeCCCCCCCCeEEEEEcC-CCCeEEecC
Q 038568 328 LVAISSSSSASNGIVSIGSGS-LNGEIKVWD 357 (357)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~s~~-~dg~v~~wd 357 (357)
++|+|+++ +|++++ .|+.|.+|+
T Consensus 282 ~~~s~dg~-------~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 282 FNVDHSGK-------YLIAAGQKSHHISVYE 305 (343)
T ss_dssp EEECTTSS-------EEEEECTTTCEEEEEE
T ss_pred EEECCCCC-------EEEEecCCCCeEEEEE
Confidence 99999998 666666 789999993
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=7.3e-24 Score=175.56 Aligned_cols=267 Identities=9% Similarity=0.085 Sum_probs=181.0
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee-cCCeEEEEecCCccc-eeeeeecCc
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH-QDCKIRVWKITASRQ-HQLVSTLPT 113 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~-~d~~i~vwd~~~~~~-~~~~~~~~~ 113 (357)
+..+++++.+ .|.+||. .+++....+.. +...+ .++|+|++ +++++ .++.|.+||+.+++. ...+.
T Consensus 10 ~~~~v~~~~~~~v~~~d~-~~~~~~~~~~~---~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---- 80 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFST-DTLEILNQITL---GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ---- 80 (331)
T ss_dssp CEEEEEEGGGTEEEEEET-TTCCEEEEEEC---CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE----
T ss_pred CEEEEEecCCCeEEEEeC-cccceeeeEEc---cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc----
Confidence 4457777778 9999999 88888887775 66667 99999987 55554 488999999988765 32222
Q ss_pred cccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCC---eEEEEEcCcchhhhhccccccccEEE
Q 038568 114 VKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDR---SFKIWNASNYKCLESVNKAHEDAVNA 188 (357)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~ 188 (357)
.+..+..+++|+| ++++++..++ .|.+||+.+++.+..+ .......+
T Consensus 81 --------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~--~~~~~~~~ 132 (331)
T 3u4y_A 81 --------------------------EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTI--PIPYDAVG 132 (331)
T ss_dssp --------------------------ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEE--ECCTTEEE
T ss_pred --------------------------cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEE--ECCCCccc
Confidence 3344555589999 6777555543 8999999998887776 34455789
Q ss_pred EEEecCCe-EE-EEeCCCe-EEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEE-ecCCeEEEEecc
Q 038568 189 VVVSDNGV-VY-TGSADGR-IRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERE 264 (357)
Q Consensus 189 ~~~~~~~~-l~-~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~ 264 (357)
++|+|++. ++ +...++. |.+|++..... ..............+..++|+|+|++++++ ..++.|++||+.
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGV------LFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCC------EEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCc------EeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 99999993 54 4455578 99999872110 001101122344567899999999966554 468999999999
Q ss_pred cCCceeeeeeccCCccceEEEeecCc--eEE-EecCCCeEEEeeCCCCcceeeeeeecCC----cCc---eEEEEEeeCC
Q 038568 265 RDHRMVFAEALWGHTGALLCLINVGD--LLA-SGSADRTVRIWQRGKENCYRCMAFLEGH----EKP---VKSLVAISSS 334 (357)
Q Consensus 265 ~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~-~~~~dg~i~vw~~~~~~~~~~~~~~~~h----~~~---v~~~~~~~~~ 334 (357)
+++.......+.. ...+..++++++ +++ +...++.|.+||+.+++. ..+..+..+ ..+ ...++|+|++
T Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~spdg 284 (331)
T 3u4y_A 207 NPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL-SFVKSFGHGLLIDPRPLFGANQMALNKTE 284 (331)
T ss_dssp STTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE-EEEEEEECCCCCCCGGGTTCCCEEECTTS
T ss_pred CCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce-eeecccccccccCCCCcccccceEECCCC
Confidence 8775222333332 244556677665 454 455688999999998743 112222221 222 3568999999
Q ss_pred CCCCCCeEEE-EEcCCCCeEEecC
Q 038568 335 SSASNGIVSI-GSGSLNGEIKVWD 357 (357)
Q Consensus 335 ~~~~~~~~~l-~s~~~dg~v~~wd 357 (357)
+ +| +++..++.|.+||
T Consensus 285 ~-------~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 285 T-------KLFISANISRELKVFT 301 (331)
T ss_dssp S-------EEEEEETTTTEEEEEE
T ss_pred C-------EEEEecCCCCcEEEEE
Confidence 8 55 5666778999996
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.2e-24 Score=177.12 Aligned_cols=249 Identities=9% Similarity=0.013 Sum_probs=178.8
Q ss_pred eeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCC-ccceeeeeecCccccceee
Q 038568 45 ASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITA-SRQHQLVSTLPTVKDRLIR 120 (357)
Q Consensus 45 ~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~ 120 (357)
++.+ .|++||+ .+++... +.. |...|.+++|+|++ |++++ ++.|.+||+.+ ++.......
T Consensus 18 ~~~~~~i~~~d~-~~~~~~~-~~~---~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~---------- 81 (297)
T 2ojh_A 18 GSMRSSIEIFNI-RTRKMRV-VWQ---TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG---------- 81 (297)
T ss_dssp CCCCEEEEEEET-TTTEEEE-EEE---ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT----------
T ss_pred CCcceeEEEEeC-CCCceee-ecc---CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc----------
Confidence 4577 9999999 7766654 444 88999999999997 55554 88999999988 654322210
Q ss_pred eecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe--cCCeEEEEE--cCcchhhhhccccccccEEEEEEecC
Q 038568 121 SVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS--WDRSFKIWN--ASNYKCLESVNKAHEDAVNAVVVSDN 194 (357)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~--~dg~i~iwd--~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (357)
.+...+.+++|+| +++++++ .++...+|. ..+++ ...+ .....+..++|+|+
T Consensus 82 -------------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~--~~~~~~~~~~~spd 139 (297)
T 2ojh_A 82 -------------------FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLM--TKNLPSYWHGWSPD 139 (297)
T ss_dssp -------------------TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEEC--CSSSSEEEEEECTT
T ss_pred -------------------cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEe--ecCCCccceEECCC
Confidence 2246788999999 7888888 334555554 44443 3333 23335889999999
Q ss_pred Ce-EE-EEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe-cCCeEEEEecc-cCCcee
Q 038568 195 GV-VY-TGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERE-RDHRMV 270 (357)
Q Consensus 195 ~~-l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~-~~~~~~ 270 (357)
+. |+ ++..++.+++|+++. .......+..+...+.+++|+|++++|+.++ .++.+++|+++ ...
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~--- 207 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDI---------DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS--- 207 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEET---------TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---
T ss_pred CCEEEEEECCCCceEEEEEEC---------CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC---
Confidence 94 54 788899999999751 1122344556778899999999999887766 58999999987 333
Q ss_pred eeeeccCCccceEEEeecCc--eEEEecCC-----------CeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCC
Q 038568 271 FAEALWGHTGALLCLINVGD--LLASGSAD-----------RTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSA 337 (357)
Q Consensus 271 ~~~~~~~~~~~v~~~~~~~~--~l~~~~~d-----------g~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 337 (357)
....+..|...+..+.|+++ +|++++.+ +.|++||+.+++ ...+..+.+|...+.+++|+|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~-- 284 (297)
T 2ojh_A 208 SVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN-VETLFDLFGGQGTMNSPNWSPDGD-- 284 (297)
T ss_dssp CEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-CEEEEEEEESTTTSCSCCBCTTSS--
T ss_pred CcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-ceeeeccCCCCcccccceECCCCC--
Confidence 23445567778888888776 77777655 579999998864 233455557888999999999998
Q ss_pred CCCeEEEEEcCCCC
Q 038568 338 SNGIVSIGSGSLNG 351 (357)
Q Consensus 338 ~~~~~~l~s~~~dg 351 (357)
+|++++.|.
T Consensus 285 -----~l~~~~~~~ 293 (297)
T 2ojh_A 285 -----EFAYVRYFP 293 (297)
T ss_dssp -----EEEEEEECC
T ss_pred -----EEEEEEecc
Confidence 777776543
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.4e-22 Score=169.36 Aligned_cols=270 Identities=10% Similarity=0.074 Sum_probs=190.4
Q ss_pred CccceeEEEEe--cceEEEeeC-------C-ceEEEeccCCccccceeccccCCCCceEEEEEecCc---eEEeecCCeE
Q 038568 28 HHMIISCLAVH--NSLLYAASL-------N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKI 94 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~-------d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i 94 (357)
....+..++|+ ++++++++. + .|.+||. .+++.+..+. ....+..++|+|++ +++...++.|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~-~~~~~~~~~~----~~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDP-VTLEVTQAIH----NDLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECT-TTCCEEEEEE----ESSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcC-CCCeEEEEEe----cCCCcceEEECCCCCEEEEEecCCCEE
Confidence 45668899999 777777762 6 8999999 8888888877 34457889999986 4555668999
Q ss_pred EEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe--cCCeEEEEEcC
Q 038568 95 RVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS--WDRSFKIWNAS 170 (357)
Q Consensus 95 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~--~dg~i~iwd~~ 170 (357)
.+||..+++....+......... ......+.+++|+| +.+++++ .++.|.+||..
T Consensus 114 ~~~d~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~ 172 (353)
T 3vgz_A 114 TAIDAKTGEVKGRLVLDDRKRTE---------------------EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG 172 (353)
T ss_dssp EEEETTTCCEEEEEESCCCCCCS---------------------SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT
T ss_pred EEEeCCCCeeEEEEecCCCcccc---------------------ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC
Confidence 99999988765544321100000 01112367899999 6566665 47899999999
Q ss_pred cchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEee----ccccceeEEEEecC
Q 038568 171 NYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV----KHRSTVNALALNGD 245 (357)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~ 245 (357)
+++.+..+ ..+...+.+++|+|++ ++++++.++.|.+||+. ..+....+. ++...+..++|+|+
T Consensus 173 ~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~----------~~~~~~~~~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 173 NIKLKTAI-QNTGKMSTGLALDSEGKRLYTTNADGELITIDTA----------DNKILSRKKLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp TTEEEEEE-CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETT----------TTEEEEEEECCCSSSCCCEEEEEEETT
T ss_pred CCceEEEe-cCCCCccceEEECCCCCEEEEEcCCCeEEEEECC----------CCeEEEEEEcCCCCCCcccceEEECCC
Confidence 98888777 4355568899999998 58888889999999987 223333333 24556788999999
Q ss_pred CCEEEEEec-CCeEEEEecccCCceeeeeeccCCccceEEEeec--Cc-eEEEecCCCeEEEeeCCCCcceeeeeeecCC
Q 038568 246 GSLLFSGGC-DRWIVVWERERDHRMVFAEALWGHTGALLCLINV--GD-LLASGSADRTVRIWQRGKENCYRCMAFLEGH 321 (357)
Q Consensus 246 ~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h 321 (357)
++++++++. ++.|.+||+.+++....+.. ... ..+.++ ++ ++++...++.|.+||..++ +.+..+...
T Consensus 242 g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~---~~~~~~~~~ 313 (353)
T 3vgz_A 242 RQRAFITDSKAAEVLVVDTRNGNILAKVAA---PES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSY---KVVKTFDTP 313 (353)
T ss_dssp TTEEEEEESSSSEEEEEETTTCCEEEEEEC---SSC--CCEEEETTTTEEEEEETTTTEEEEEETTTT---EEEEEEECC
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEEc---CCC--ceEEECCCCCEEEEEECCCCeEEEEECCCC---eEEEEEecC
Confidence 997777665 59999999998875443332 222 334554 44 4555557999999999987 444444443
Q ss_pred cCceEEEEEeeCCCCCCCCeEEEEEcCCC
Q 038568 322 EKPVKSLVAISSSSSASNGIVSIGSGSLN 350 (357)
Q Consensus 322 ~~~v~~~~~~~~~~~~~~~~~~l~s~~~d 350 (357)
..+.+++|+|+++ +|+.+..+
T Consensus 314 -~~~~~~~~s~dg~-------~l~v~~~~ 334 (353)
T 3vgz_A 314 -THPNSLALSADGK-------TLYVSVKQ 334 (353)
T ss_dssp -SEEEEEEECTTSC-------EEEEEEEC
T ss_pred -CCCCeEEEcCCCC-------EEEEEEcc
Confidence 4679999999997 55555443
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.5e-23 Score=174.01 Aligned_cols=260 Identities=8% Similarity=0.024 Sum_probs=183.9
Q ss_pred ceEEEeeCC-ceEEEeccCCccccceeccccCCCC-ceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCcc
Q 038568 40 SLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSG-SVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTV 114 (357)
Q Consensus 40 ~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 114 (357)
++|++++.+ .|.+||. .+++.+..+.. ++.. .+..++|+|++ ++++..++.|.+||+.+++....+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~-~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~- 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDT-EKMAVDKVITI--ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP- 77 (337)
T ss_dssp EEEEEEETTTEEEEEET-TTTEEEEEEEC--TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT-
T ss_pred cEEEEcCCCCeEEEEEC-CCCcEEEEEEc--CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc-
Confidence 578899999 9999999 88888877763 1211 58899999986 45666789999999988765544332100
Q ss_pred ccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe------------cCCeEEEEEcCcchhhhhccc
Q 038568 115 KDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS------------WDRSFKIWNASNYKCLESVNK 180 (357)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~ 180 (357)
..+...+.+++|+| +++++++ .++.|.+||+.+++.+..+
T Consensus 78 ------------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-- 131 (337)
T 1pby_B 78 ------------------------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF-- 131 (337)
T ss_dssp ------------------------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE--
T ss_pred ------------------------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE--
Confidence 01223566788998 5777775 5799999999988877666
Q ss_pred cccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCC---
Q 038568 181 AHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR--- 256 (357)
Q Consensus 181 ~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--- 256 (357)
.....+.+++|+|++. ++++ ++.|.+||+. ..+....+..+.. ...+.|+|+++.++..+.++
T Consensus 132 ~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~----------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~ 198 (337)
T 1pby_B 132 EAPRQITMLAWARDGSKLYGL--GRDLHVMDPE----------AGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVM 198 (337)
T ss_dssp ECCSSCCCEEECTTSSCEEEE--SSSEEEEETT----------TTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEE
T ss_pred eCCCCcceeEECCCCCEEEEe--CCeEEEEECC----------CCcEeeeeecccc-CCCceeCCCccEEeeeccCCCce
Confidence 2345678899999995 6666 6899999987 2333333333220 11237889888666554332
Q ss_pred ---------------------eEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCccee
Q 038568 257 ---------------------WIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYR 313 (357)
Q Consensus 257 ---------------------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~ 313 (357)
.|.+||+.+++.. ...+..+...+.+++++++ +++++ ++.|++||+.++ +
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~---~ 271 (337)
T 1pby_B 199 ATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA--MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN---A 271 (337)
T ss_dssp EEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE--EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT---E
T ss_pred eeeeeccccccccccccccccceEEEeCCCCCce--EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC---c
Confidence 4689999887653 2233445566777888776 67766 799999999987 3
Q ss_pred eeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 314 CMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 314 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+..+.. ...+.+++|+|+++ +|++++.|+.|++||
T Consensus 272 ~~~~~~~-~~~~~~~~~s~dg~-------~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 272 SIKRVPL-PHSYYSVNVSTDGS-------TVWLGGALGDLAAYD 307 (337)
T ss_dssp EEEEEEC-SSCCCEEEECTTSC-------EEEEESBSSEEEEEE
T ss_pred CcceecC-CCceeeEEECCCCC-------EEEEEcCCCcEEEEE
Confidence 4444443 34578999999998 888888999999996
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.92 E-value=2.9e-23 Score=190.40 Aligned_cols=275 Identities=8% Similarity=0.031 Sum_probs=191.6
Q ss_pred ccceeEEEEe--cceEEEeeC-C------ceEEEeccCCccccceeccccCCC----------------------CceEE
Q 038568 29 HMIISCLAVH--NSLLYAASL-N------EINVFDLISDYSHVDTFSNDLSSS----------------------GSVKS 77 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~-d------~i~iw~~~~~~~~~~~~~~~~~~~----------------------~~v~~ 77 (357)
...|.+++|+ |++|++++. | .|++||+ .+++....+.... +. ..|.+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDI-GSGQTRLLVDSKV-VLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEET-TTCCEEEEECGGG-TC--------------------CCEESCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEEC-CCCceeEccchhh-cccccccccchhhhhhhhhhhccccCcce
Confidence 5679999999 899999886 3 5999999 8877666655311 11 33889
Q ss_pred EEEecCc--eEEeecCCeEEEEecCCcc--ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-
Q 038568 78 ITFHITK--IFTAHQDCKIRVWKITASR--QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ- 152 (357)
Q Consensus 78 l~~~~~~--l~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 152 (357)
++|+||+ |++++. +.|.+||+.++. ....+ ..|...+.+++|+|
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l------------------------------~~~~~~~~~~~~SPD 162 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQL------------------------------THGEGFATDAKLSPK 162 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBC------------------------------CCSSSCEEEEEECTT
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEc------------------------------ccCCcccccccCCCC
Confidence 9999998 666665 999999998772 11111 15667899999999
Q ss_pred -CeEEEEecCCeEEEEEcCcchhhhhcccccccc----------------EEEEEEecCC-eEEEEeCCC----------
Q 038568 153 -GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDA----------------VNAVVVSDNG-VVYTGSADG---------- 204 (357)
Q Consensus 153 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----------------v~~~~~~~~~-~l~~~~~d~---------- 204 (357)
++|+.++ ++.|++||+.+++..... ..+... +..+.|+||| +|++++.|+
T Consensus 163 G~~la~~~-~~~i~~~d~~~g~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~ 240 (741)
T 2ecf_A 163 GGFVSFIR-GRNLWVIDLASGRQMQLT-ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYE 240 (741)
T ss_dssp SSEEEEEE-TTEEEEEETTTTEEEECC-CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEe-CCcEEEEecCCCCEEEec-cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCC
Confidence 6677776 569999999887665443 222221 4789999999 477777665
Q ss_pred -----------------------eEEEEEccccccccccccceeeeeEe--eccccceeEEEEecCCCEEEEEec-----
Q 038568 205 -----------------------RIRVWERSVVDHNKERKSRHMLVTTL--VKHRSTVNALALNGDGSLLFSGGC----- 254 (357)
Q Consensus 205 -----------------------~i~i~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~----- 254 (357)
.|.+||+. .. .+..... ..|...+..++| |||++|++++.
T Consensus 241 ~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~------~~---~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~ 310 (741)
T 2ecf_A 241 VYADRTDVIEQRYPAAGDANVQVKLGVISPA------EQ---AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQK 310 (741)
T ss_dssp ECSSCEEEEEEECCBTTSCCCEEEEEEECSS------TT---CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSS
T ss_pred CCCCcccceEeecCCCCCCCCeeEEEEEECC------CC---CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCC
Confidence 78888876 10 1111111 146788999999 99999987764
Q ss_pred CCeEEEEecccCCceeeeeeccC-CccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEE-EE
Q 038568 255 DRWIVVWERERDHRMVFAEALWG-HTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSL-VA 330 (357)
Q Consensus 255 dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~-~~ 330 (357)
+..|++||+.+++.......... ....+..+.|+++ ++++++.||.++||.+.... . ...+..|...|..+ .|
T Consensus 311 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~--~-~~~l~~~~~~v~~~~~~ 387 (741)
T 2ecf_A 311 KLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG--K-AAALTHGNWSVDELLAV 387 (741)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS--C-EEESCCSSSCEEEEEEE
T ss_pred eEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC--C-eeeeeecceEEEeEeEE
Confidence 56899999998875433322110 0002345666655 88888999988888776321 3 56677788888887 59
Q ss_pred eeCCCCCCCCeEEEEEcCCCC--eEEecC
Q 038568 331 ISSSSSASNGIVSIGSGSLNG--EIKVWD 357 (357)
Q Consensus 331 ~~~~~~~~~~~~~l~s~~~dg--~v~~wd 357 (357)
+|+++ .++++++.|+ .+++|+
T Consensus 388 s~dg~------~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 388 DEKAG------LAYFRAGIESARESQIYA 410 (741)
T ss_dssp ETTTT------EEEEEECSSCTTCBEEEE
T ss_pred eCCCC------EEEEEEeCCCCceEEEEE
Confidence 99997 2345666666 888884
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=1e-21 Score=167.81 Aligned_cols=199 Identities=13% Similarity=0.095 Sum_probs=144.8
Q ss_pred CccceeEEEEe--cceEEEeeCCceEEEeccCCccc----------cceec--cccCCCCceEEEEEecCc--eE----E
Q 038568 28 HHMIISCLAVH--NSLLYAASLNEINVFDLISDYSH----------VDTFS--NDLSSSGSVKSITFHITK--IF----T 87 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~~----------~~~~~--~~~~~~~~v~~l~~~~~~--l~----~ 87 (357)
+...++.++++ +.++++++.+.+++|+. ..... +.... ....+...|.+++|+|++ |+ +
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dgv~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASGLQIFPT-KNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTEEEEEEH-HHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCEEEEEEc-hHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 34568899998 78888888777888876 32111 00000 001256789999999987 66 7
Q ss_pred eecCCeEEEEecCCcc--------ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEE
Q 038568 88 AHQDCKIRVWKITASR--------QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMY 156 (357)
Q Consensus 88 ~~~d~~i~vwd~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~ 156 (357)
++.|+.|++||+.+.. ....+. .+.+|...|.+++|+| .+|+
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~---------------------------~~~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHK---------------------------LLKDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEE---------------------------CCCSGGGSEEEEEECSSCTTEEE
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeee---------------------------ccCCCCCceEEEEECCCCCCEEE
Confidence 8899999999997651 111111 2237899999999998 6899
Q ss_pred EEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEee----
Q 038568 157 SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV---- 231 (357)
Q Consensus 157 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~---- 231 (357)
+++.||+|++||++++..+... ..|...+.+++|+|++ +|++|+.||.|++||++ . .....+.
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~-~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~----------~~~~~~~~~~~ 234 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCAT-LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-L----------QEKKVIPCPPF 234 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEE-ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-C----------CEEEEECCCTT
T ss_pred EEECCCeEEEEEcCCCcceeec-cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-C----------cccccccCCcc
Confidence 9999999999999988665544 5688899999999999 69999999999999986 1 1111221
Q ss_pred ---ccccceeEEEEecCCCEEEEEe-cCC------eEEEEecccC
Q 038568 232 ---KHRSTVNALALNGDGSLLFSGG-CDR------WIVVWERERD 266 (357)
Q Consensus 232 ---~~~~~v~~~~~~~~~~~l~~~~-~dg------~i~vwd~~~~ 266 (357)
.|...|.+++|++++.++++.+ .|| .+++|+++..
T Consensus 235 ~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 235 YESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 2334899999999887775533 343 3899999864
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.2e-21 Score=163.40 Aligned_cols=263 Identities=9% Similarity=0.106 Sum_probs=172.0
Q ss_pred ceEEEecc-CCccccc-eeccccCCCCceEEEEEecCc-eEEeec---CCeEEEEecCCccceeeeeecCccccceeeee
Q 038568 49 EINVFDLI-SDYSHVD-TFSNDLSSSGSVKSITFHITK-IFTAHQ---DCKIRVWKITASRQHQLVSTLPTVKDRLIRSV 122 (357)
Q Consensus 49 ~i~iw~~~-~~~~~~~-~~~~~~~~~~~v~~l~~~~~~-l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 122 (357)
.|.+|++. ++++... .... +...+..++|+|++ |++++. ++.|.+|++.+++. ..+....
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~---~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~---------- 82 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLA---ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA-HKLNTVV---------- 82 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEE---ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE-EEEEEEE----------
T ss_pred CEEEEEEcCCCCeEEEeeeee---ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE-EEeeeee----------
Confidence 67777772 2333322 1222 55677889999998 666655 68999999976543 2222111
Q ss_pred cCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-cCCeEEEEEcCc---chhhhhcccc--------ccccEEE
Q 038568 123 LPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-WDRSFKIWNASN---YKCLESVNKA--------HEDAVNA 188 (357)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~i~iwd~~~---~~~~~~~~~~--------~~~~v~~ 188 (357)
.+...+..++|+| ++|++++ .++.|.+|++.. .+.+..+... ....+.+
T Consensus 83 -----------------~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~ 145 (347)
T 3hfq_A 83 -----------------APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHY 145 (347)
T ss_dssp -----------------EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEE
T ss_pred -----------------cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceE
Confidence 4556788899999 6677777 689999999963 2222222111 1234889
Q ss_pred EEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeec-cccceeEEEEecCCCEEEE-EecCCeEEEEeccc
Q 038568 189 VVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLLFS-GGCDRWIVVWERER 265 (357)
Q Consensus 189 ~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~-~~~dg~i~vwd~~~ 265 (357)
++|+|++. +++...++.|.+|++.. .. .......... ....+..++|+|+|+++++ +..++.|.+|+++.
T Consensus 146 ~~~spdg~l~v~~~~~~~v~~~~~~~------~g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 146 TDLTPDNRLAVIDLGSDKVYVYNVSD------AG-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECT------TS-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEECCCCcEEEEeCCCCEEEEEEECC------CC-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 99999996 55556688999999861 11 1112222222 2335778999999996665 55688999999885
Q ss_pred C-CceeeeeeccCCc------cceEEEeecCc--eE-EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 266 D-HRMVFAEALWGHT------GALLCLINVGD--LL-ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 266 ~-~~~~~~~~~~~~~------~~v~~~~~~~~--~l-~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
. ............. ..+..++|+++ +| ++...++.|.+|++......+.+..+..+...+.+++|+|+++
T Consensus 219 ~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 219 QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA 298 (347)
T ss_dssp TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS
T ss_pred CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC
Confidence 1 2222222222211 34677777776 55 5666789999999974334466666777777789999999998
Q ss_pred CCCCCeEEEEEcC-CCCeEEec
Q 038568 336 SASNGIVSIGSGS-LNGEIKVW 356 (357)
Q Consensus 336 ~~~~~~~~l~s~~-~dg~v~~w 356 (357)
+|++++ .++.|.+|
T Consensus 299 -------~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 299 -------FVVVVNQNTDNATLY 313 (347)
T ss_dssp -------EEEEEETTTTEEEEE
T ss_pred -------EEEEEEcCCCcEEEE
Confidence 776665 45899999
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=1.1e-22 Score=185.43 Aligned_cols=282 Identities=9% Similarity=-0.000 Sum_probs=176.8
Q ss_pred cccccccceecccccCCCCCCCccceeEEEEecceEEEeeCCceEEEeccCCcccc-ceeccccCCC-------------
Q 038568 7 VSSEAFKHHCIASLKIPSPDPHHMIISCLAVHNSLLYAASLNEINVFDLISDYSHV-DTFSNDLSSS------------- 72 (357)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~g~~h~~~i~~~~~s~~~l~t~~~d~i~iw~~~~~~~~~-~~~~~~~~~~------------- 72 (357)
..+..|.+.....+.. + .+..+.|.|+.+++++.+.| +||+ .+++.+ ..+.. +.
T Consensus 10 ~~~~~~~~~~~~~~~~-----~--~~~~~~w~g~~~~~~~~~~i-~~d~-~tg~~~~~~l~~---~~~~~~~l~~~~~~~ 77 (706)
T 2z3z_A 10 HGSLMPGGKEFYNFYP-----E--YVVGLQWMGDNYVFIEGDDL-VFNK-ANGKSAQTTRFS---AADLNALMPEGCKFQ 77 (706)
T ss_dssp -------------------------CTTCEEETTEEEEEETTEE-EEEC--------CEEEE---HHHHHTTC-------
T ss_pred cccccCCccccccccc-----c--cCCCCcCcCCeEEEEeCCcE-EEEC-CCCcEeeEEeec---hhHhhhhccchhccc
Confidence 4555666666666653 3 35667777777777776667 9999 887763 33332 22
Q ss_pred ----CceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 73 ----GSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 73 ----~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
..|.+++|+|++.+..+.++.|++||+.+++..... .+...+.++
T Consensus 78 ~~~~~~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l~-------------------------------~~~~~~~~~ 126 (706)
T 2z3z_A 78 TTDAFPSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYLF-------------------------------DTNEETASL 126 (706)
T ss_dssp ----CCCEEEEETTTTEEEEEETTEEEEEETTTTEEEEEE-------------------------------CCTTCCTTC
T ss_pred cccccCceeEEECCCCeEEEEECCEEEEEECCCCceEEcc-------------------------------CCcccccCC
Confidence 569999999998333335699999999877543221 344567888
Q ss_pred EEec--CeEEEEecCCeEEEEEcCc-----chhhhhcccccccc--------------EEEEEEecCC-eEEEEe-----
Q 038568 149 VVKQ--GLMYSVSWDRSFKIWNASN-----YKCLESVNKAHEDA--------------VNAVVVSDNG-VVYTGS----- 201 (357)
Q Consensus 149 ~~~~--~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~--------------v~~~~~~~~~-~l~~~~----- 201 (357)
+|+| +.|+. ..++.|++||+.+ ++..... ..+... +.++.|+||| +|++++
T Consensus 127 ~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~~~-~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 127 DFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIAVT-IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp EECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEESC-SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred cCCCCCCEEEE-EECCeEEEEecCcccccCCCcEEec-cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 9999 67777 4789999999988 7665444 222222 4789999999 477776
Q ss_pred ----------------------------CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe
Q 038568 202 ----------------------------ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG 253 (357)
Q Consensus 202 ----------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 253 (357)
.+..|++||+. .+. ...+.....+...+.+++|+|||+.|++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~------~~~--~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA------TGK--TVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT------TTE--EEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC------CCc--eEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 44679999987 211 111111224667899999999999999988
Q ss_pred cCC-----eEEEEecccCCceeeeeeccCCcc---ceEEEeecC--c--eEEEecCCCeEEEeeCC-CCcceeeeeeecC
Q 038568 254 CDR-----WIVVWERERDHRMVFAEALWGHTG---ALLCLINVG--D--LLASGSADRTVRIWQRG-KENCYRCMAFLEG 320 (357)
Q Consensus 254 ~dg-----~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~--~--~l~~~~~dg~i~vw~~~-~~~~~~~~~~~~~ 320 (357)
.++ .|++||+.+++....+... .+.. .+..+.|++ + ++++++.|+.++||++. ++ ..+..+..
T Consensus 277 ~~~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~---~~~~~l~~ 352 (706)
T 2z3z_A 277 VNRAQNECKVNAYDAETGRFVRTLFVE-TDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG---RLIRQVTK 352 (706)
T ss_dssp ECTTSCEEEEEEEETTTCCEEEEEEEE-ECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS---CEEEECCC
T ss_pred eCCCCCeeEEEEEECCCCceeeEEEEc-cCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC---CEEEecCC
Confidence 775 8999999987433222211 1221 234456655 4 88899999999999886 33 44566677
Q ss_pred CcCceEE-EEEeeCCCCCCCCeEEEEEcCCCC
Q 038568 321 HEKPVKS-LVAISSSSSASNGIVSIGSGSLNG 351 (357)
Q Consensus 321 h~~~v~~-~~~~~~~~~~~~~~~~l~s~~~dg 351 (357)
|...+.. ++|+|+++ .++++++.++
T Consensus 353 ~~~~v~~~~~~spdg~------~l~~~~~~~~ 378 (706)
T 2z3z_A 353 GEWEVTNFAGFDPKGT------RLYFESTEAS 378 (706)
T ss_dssp SSSCEEEEEEECTTSS------EEEEEESSSC
T ss_pred CCeEEEeeeEEcCCCC------EEEEEecCCC
Confidence 7778877 79999987 2345555555
No 140
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=1.6e-22 Score=180.34 Aligned_cols=262 Identities=8% Similarity=-0.005 Sum_probs=181.3
Q ss_pred CccceeEEEEe--cceEEEeeC-C-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeec---CCeEEEEec
Q 038568 28 HHMIISCLAVH--NSLLYAASL-N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQ---DCKIRVWKI 99 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~-d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~---d~~i~vwd~ 99 (357)
+..+|.+++|+ |++||.++. | +++||++ ++++..+.... +...+..++|+||. +++++. +...++|.+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~-~~g~~~~lt~~---~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLY-DGGETVKLNRE---PINSVLDPHYGVGRVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEE-ETTEEEECCSS---CCSEECEECTTCSEEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEE-cCCCcEeeecc---cccccccccCCCCeEEEEeccCCCCcceEEEEE
Confidence 45689999999 899999886 8 9999999 77665544432 33689999999998 555554 455677665
Q ss_pred CC--ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhh
Q 038568 100 TA--SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLE 176 (357)
Q Consensus 100 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~ 176 (357)
+. ......+.. .....+.++.+++ ..+++.+.++.+.+||+.+++...
T Consensus 96 ~~~~~g~~~~l~~-----------------------------~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~ 146 (582)
T 3o4h_A 96 NTSRPGEEQRLEA-----------------------------VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE 146 (582)
T ss_dssp ETTSTTCCEECTT-----------------------------SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE
T ss_pred eccCCCccccccC-----------------------------CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE
Confidence 44 221122211 1112234444444 444555555556699998876544
Q ss_pred hccccccccEEEEEEecCCe-EEEEeCC----CeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEE
Q 038568 177 SVNKAHEDAVNAVVVSDNGV-VYTGSAD----GRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFS 251 (357)
Q Consensus 177 ~~~~~~~~~v~~~~~~~~~~-l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 251 (357)
.. . +.. .+++|+|||+ |++++.+ +.|++||+. . .+ ...+..|...+..++|+|||+.|++
T Consensus 147 l~-~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~------~----g~-~~~l~~~~~~~~~~~~SpDG~~l~~ 211 (582)
T 3o4h_A 147 LA-R-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLS------S----GG-LRVFDSGEGSFSSASISPGMKVTAG 211 (582)
T ss_dssp EE-E-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETT------T----CC-CEEECCSSCEEEEEEECTTSCEEEE
T ss_pred ee-c-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCC------C----CC-ceEeecCCCccccceECCCCCEEEE
Confidence 33 2 222 7899999994 7767666 789999987 1 22 2355678888999999999999998
Q ss_pred EecCC--eEEEEecccCCceeeeeeccCCccceEEEe--------ecCc--eEEEecCCCeEEEeeCCCCcceeeeeeec
Q 038568 252 GGCDR--WIVVWERERDHRMVFAEALWGHTGALLCLI--------NVGD--LLASGSADRTVRIWQRGKENCYRCMAFLE 319 (357)
Q Consensus 252 ~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~--------~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 319 (357)
+..++ .|++||+.+++.. .+.+|...+..+. |+++ ++++++.|+.+++|++ + +...
T Consensus 212 ~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g---~~~~--- 279 (582)
T 3o4h_A 212 LETAREARLVTVDPRDGSVE----DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--G---ERVE--- 279 (582)
T ss_dssp EECSSCEEEEEECTTTCCEE----ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--T---EEEC---
T ss_pred ccCCCeeEEEEEcCCCCcEE----EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--C---Ceec---
Confidence 88888 8999999987643 4455666665555 7766 8889999999999999 4 2222
Q ss_pred CCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCe---EEecC
Q 038568 320 GHEKPVKSLVAISSSSSASNGIVSIGSGSLNGE---IKVWD 357 (357)
Q Consensus 320 ~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~---v~~wd 357 (357)
...+.|.+++|+ +++ ++++++.+.. +.+||
T Consensus 280 ~~~~~v~~~~~s-dg~-------~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 280 APQGNHGRVVLW-RGK-------LVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp CCSSEEEEEEEE-TTE-------EEEEEEETTEEEEEEEET
T ss_pred cCCCceEEEEec-CCE-------EEEEEcCCCCCCeEEEEc
Confidence 234678999999 876 7888776643 55543
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.91 E-value=4.2e-22 Score=188.79 Aligned_cols=276 Identities=8% Similarity=0.015 Sum_probs=202.0
Q ss_pred CccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCcc
Q 038568 28 HHMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASR 103 (357)
Q Consensus 28 h~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~ 103 (357)
|...+.++.|+ ..++++++.+ .+.||.+...+.....+.. |. .+...+|+|++ |+.+ .++.|.+|++...+
T Consensus 202 ~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~---~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 202 MSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTS---FT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEK 276 (1045)
T ss_dssp CSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCC---CC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCC
T ss_pred CCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecC---CC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceE
Confidence 99999999999 5555677777 9999987323445555554 44 46677999987 6655 58999999984332
Q ss_pred ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe-c--CeEEEEecCCeEEEEEcCcchhhhhccc
Q 038568 104 QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK-Q--GLMYSVSWDRSFKIWNASNYKCLESVNK 180 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 180 (357)
...+.... ......+..|...+.+++|+ | +.+++++ ++.|.+|++..++... + .
T Consensus 277 -l~~l~~~~-------------------~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~-~ 333 (1045)
T 1k32_A 277 -IEKIEIGD-------------------LESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-P 333 (1045)
T ss_dssp -EEECCCCC-------------------CCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-S
T ss_pred -eeeeccCc-------------------ccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-c-c
Confidence 21111100 00001112466678999999 8 6677777 8899999998776443 3 4
Q ss_pred cccc-cEEEEEEecCC-eEEEEeCCCeEE-EEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCe
Q 038568 181 AHED-AVNAVVVSDNG-VVYTGSADGRIR-VWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257 (357)
Q Consensus 181 ~~~~-~v~~~~~~~~~-~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 257 (357)
.+.. .+..++|+ ++ .|+.++.++.+. +||+. . ... ..+..|...+..++|+|||++|++++.++.
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~------~----~~~-~~l~~~~~~~~~~~~SpDG~~la~~~~~~~ 401 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR------T----GKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFE 401 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT------T----CCE-EECCCCCCSEEEEEECTTSSEEEEEETTSE
T ss_pred CCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC------C----CCc-eEecCCccceeeeEECCCCCEEEEECCCCe
Confidence 5556 89999999 88 588888788888 88876 1 122 223367788999999999999999999999
Q ss_pred EEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCC----------CeEEEeeCCCCcceeeeeeecCCcCce
Q 038568 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSAD----------RTVRIWQRGKENCYRCMAFLEGHEKPV 325 (357)
Q Consensus 258 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~d----------g~i~vw~~~~~~~~~~~~~~~~h~~~v 325 (357)
|++||+.+++.. ....+|...+..++|+|+ +|++++.+ +.|++||+.++ + ...+..|...+
T Consensus 402 v~~~d~~tg~~~---~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g---~-~~~l~~~~~~~ 474 (1045)
T 1k32_A 402 IMTVDLETGKPT---VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR---K-IFAATTENSHD 474 (1045)
T ss_dssp EEEEETTTCCEE---EEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT---E-EEECSCSSSBE
T ss_pred EEEEECCCCceE---EeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC---c-EEEeeCCCccc
Confidence 999999987643 233467788888888876 77777654 49999999986 3 55677788889
Q ss_pred EEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 326 KSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
..++|+|+++ +|+.++.++..++|+
T Consensus 475 ~~~~~spdG~-------~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 475 YAPAFDADSK-------NLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEEECTTSC-------EEEEEESCCCCCEEC
T ss_pred CCceEcCCCC-------EEEEEecccCCcCcc
Confidence 9999999998 888888877776664
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=3.4e-21 Score=160.16 Aligned_cols=266 Identities=12% Similarity=0.122 Sum_probs=172.4
Q ss_pred CccceeEEEEe--cceEEEeeCC--ceEEEeccC--Ccc--ccceeccccCCCCceEEEEEecCc--eEEee-cCCeEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASLN--EINVFDLIS--DYS--HVDTFSNDLSSSGSVKSITFHITK--IFTAH-QDCKIRV 96 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d--~i~iw~~~~--~~~--~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~-~d~~i~v 96 (357)
|...+.+++|+ +++|++++.+ .|.+|++ + +++ .+..+.. ...+..++|+|++ |++++ .++.|.+
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI-APDDGALTFAAESAL----PGSLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEE-CTTTCCEEEEEEEEC----SSCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEe-cCCCCceeecccccc----CCCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 77789999999 8878887764 9999999 5 333 3344442 3378899999987 55554 5889999
Q ss_pred EecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-cCCeEEEEEcCc-c
Q 038568 97 WKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-WDRSFKIWNASN-Y 172 (357)
Q Consensus 97 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~i~iwd~~~-~ 172 (357)
||+..+......... .....+.+++|+| +++++++ .++.|.+||+.+ +
T Consensus 111 ~d~~~~~~~~~~~~~----------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVV----------------------------EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp EEEETTEEEEEEEEE----------------------------CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred EECCCCccccccccc----------------------------cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 999533222222221 2223578899999 5677776 899999999987 4
Q ss_pred hhhh----hccccccccEEEEEEecCCe-EE-EEeCCCeEEEEEccccccccccccceeeeeEee---cc---ccceeEE
Q 038568 173 KCLE----SVNKAHEDAVNAVVVSDNGV-VY-TGSADGRIRVWERSVVDHNKERKSRHMLVTTLV---KH---RSTVNAL 240 (357)
Q Consensus 173 ~~~~----~~~~~~~~~v~~~~~~~~~~-l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~---~~---~~~v~~~ 240 (357)
+... .+.......+..++|+|++. ++ ++..++.|.+||+.. ............ .. ...+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD------PHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC------TTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC------CCCcEEEEeeccccCccccccCCccce
Confidence 3321 22123345788999999994 54 445889999999862 111111111221 11 2356689
Q ss_pred EEecCCCEEEEE-ecCCeEEEEecccC-CceeeeeeccCCccceEEEeecCc--eEEEec-CCCeEEEeeCC--CCccee
Q 038568 241 ALNGDGSLLFSG-GCDRWIVVWERERD-HRMVFAEALWGHTGALLCLINVGD--LLASGS-ADRTVRIWQRG--KENCYR 313 (357)
Q Consensus 241 ~~~~~~~~l~~~-~~dg~i~vwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~-~dg~i~vw~~~--~~~~~~ 313 (357)
+|+|++++|+++ ..++.|.+||+... ........+..+.. +..++|+++ +|++++ .++.|.+|+++ +++ .+
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~-~~ 314 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL-LH 314 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE-EE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCce-ee
Confidence 999999887754 47999999999831 12223333333333 667777765 666666 68999999654 442 34
Q ss_pred eeeeecCCcCceEEEEEeeCCC
Q 038568 314 CMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 314 ~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
.+..+... ....+++|.|+.+
T Consensus 315 ~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 315 EKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEECS-SSCCEEEEEEEC-
T ss_pred EccccccC-CCCeeEEEEcccC
Confidence 45555443 4567888888764
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.91 E-value=6.1e-22 Score=180.64 Aligned_cols=283 Identities=8% Similarity=0.039 Sum_probs=186.1
Q ss_pred cceeEEEEe-cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCC-----
Q 038568 30 MIISCLAVH-NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITA----- 101 (357)
Q Consensus 30 ~~i~~~~~s-~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~----- 101 (357)
..|.+++|+ .+.++.+....|++||+ .+++..... . +...+.+++|+|++ |++ ..|+.|.+||+.+
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~-~~~~~~~l~-~---~~~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDM-LARKVTYLF-D---TNEETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEET-TTTEEEEEE-C---CTTCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCCCeEEEEECCEEEEEEC-CCCceEEcc-C---CcccccCCcCCCCCCEEEE-EECCeEEEEecCcccccC
Confidence 569999999 65555553339999999 776654433 3 67788999999998 555 5789999999987
Q ss_pred ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe--------------------
Q 038568 102 SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-------------------- 159 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------------------- 159 (357)
++......... ... ..+.. +...+...+.++.|+| ++|++++
T Consensus 156 g~~~~~~~~~~---~~~-----------~~g~~--~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~ 219 (706)
T 2z3z_A 156 SRAIAVTIDGT---ETL-----------VYGQA--VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAE 219 (706)
T ss_dssp CCCEESCSCCB---TTE-----------EESSC--CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCE
T ss_pred CCcEEeccCCC---CCe-----------Ecccc--hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCc
Confidence 55432211100 000 00000 1122334568899999 7788877
Q ss_pred -------------cCCeEEEEEcCcchhhhhcc-ccccccEEEEEEecCCe-EEEEeCCC-----eEEEEEccccccccc
Q 038568 160 -------------WDRSFKIWNASNYKCLESVN-KAHEDAVNAVVVSDNGV-VYTGSADG-----RIRVWERSVVDHNKE 219 (357)
Q Consensus 160 -------------~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-l~~~~~d~-----~i~i~d~~~~~~~~~ 219 (357)
.+..|.+||+.+++...... ..+...+.+++|+|++. |++++.++ .|++||+. .
T Consensus 220 ~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~------~ 293 (706)
T 2z3z_A 220 SKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAE------T 293 (706)
T ss_dssp EEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETT------T
T ss_pred eEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECC------C
Confidence 44679999998877543331 24667899999999994 77777665 89999987 2
Q ss_pred cccceeeeeEeeccc---cceeEEEEec--CCCEEEEEecCCeEEEEecc-cCCceeeeeeccCCccceEE-EeecCc--
Q 038568 220 RKSRHMLVTTLVKHR---STVNALALNG--DGSLLFSGGCDRWIVVWERE-RDHRMVFAEALWGHTGALLC-LINVGD-- 290 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~v~~-~~~~~~-- 290 (357)
+.. ...+.. ..+. ..+..++|+| +|++++++..|+.+++|+++ ++. ....+..+...+.. +.|+++
T Consensus 294 g~~-~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~---~~~~l~~~~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 294 GRF-VRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR---LIRQVTKGEWEVTNFAGFDPKGT 368 (706)
T ss_dssp CCE-EEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC---EEEECCCSSSCEEEEEEECTTSS
T ss_pred Cce-eeEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC---EEEecCCCCeEEEeeeEEcCCCC
Confidence 100 111111 1122 2346789999 99999999999999999887 343 33445566666765 677765
Q ss_pred eE-EEecCCC----eEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcC-CC---CeEEecC
Q 038568 291 LL-ASGSADR----TVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGS-LN---GEIKVWD 357 (357)
Q Consensus 291 ~l-~~~~~dg----~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~-~d---g~v~~wd 357 (357)
.| +++..++ .|..||+.+++ ...+. |...+.+++|+|+++ +|+..+ .+ +.|.+||
T Consensus 369 ~l~~~~~~~~~~~~~l~~~d~~~~~----~~~l~-~~~~~~~~~~spdg~-------~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 369 RLYFESTEASPLERHFYCIDIKGGK----TKDLT-PESGMHRTQLSPDGS-------AIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp EEEEEESSSCTTCBEEEEEETTCCC----CEESC-CSSSEEEEEECTTSS-------EEEEEEECSSCSCEEEEEE
T ss_pred EEEEEecCCCCceEEEEEEEcCCCC----ceecc-CCCceEEEEECCCCC-------EEEEEecCCCCCcEEEEEE
Confidence 44 4555554 67777777653 22232 567799999999998 666543 33 5688885
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=1.3e-22 Score=185.62 Aligned_cols=273 Identities=5% Similarity=-0.055 Sum_probs=181.1
Q ss_pred cceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCC---ceEEEEEecCc--eEEeecC---------C
Q 038568 30 MIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSG---SVKSITFHITK--IFTAHQD---------C 92 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~~--l~~~~~d---------~ 92 (357)
..+.+++|+ |+++++ +.| .|++||+ .+++....+.. |.. .|.+++|+||+ |++++.+ +
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~-~~g~~~~~~~~---~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNV-ETNTSTVLIEG---KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCG-GGCCCEEEECT---TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEEC-CCCcEEEEecc---ccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 347788999 777766 678 9999999 88887777765 544 49999999998 7777664 7
Q ss_pred eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcC
Q 038568 93 KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNAS 170 (357)
Q Consensus 93 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~ 170 (357)
.+.+||+.+++. ..+.... .|...+..++|+| +.|+.++. +.|++||+.
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~---------------------------~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPE---------------------------VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp EEEEEESSSCCC-EECCCTT---------------------------CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred eEEEEECCCCce-EeccCCc---------------------------cccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 888999998764 2222211 4555688899999 67887775 799999998
Q ss_pred cchhhhhccccccc------------------cEEEEEEecCC-eEEEEeCCC---------------------------
Q 038568 171 NYKCLESVNKAHED------------------AVNAVVVSDNG-VVYTGSADG--------------------------- 204 (357)
Q Consensus 171 ~~~~~~~~~~~~~~------------------~v~~~~~~~~~-~l~~~~~d~--------------------------- 204 (357)
+++..... ..+.. .+.+++|+||| +|++++.++
T Consensus 143 ~g~~~~~~-~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (723)
T 1xfd_A 143 GKQAIRVV-STGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKA 221 (723)
T ss_dssp SSCCEEEE-CCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBT
T ss_pred CCceEEEe-cCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCC
Confidence 87765544 23222 23789999999 477766543
Q ss_pred -------eEEEEEccccccccccccceeeeeEeec------cccceeEEEEecCCCEEEEEec----CCeEEEEecccCC
Q 038568 205 -------RIRVWERSVVDHNKERKSRHMLVTTLVK------HRSTVNALALNGDGSLLFSGGC----DRWIVVWERERDH 267 (357)
Q Consensus 205 -------~i~i~d~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~ 267 (357)
.|++||+.. ......+.. +...+..++|+|||++|++... +..|++||+.+++
T Consensus 222 G~~~~~~~l~~~d~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 222 GSENPSISLHVIGLNG----------PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp TSCCCEEEEEEEESSS----------SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred CCCCCeeEEEEEECCC----------CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 788888862 111122222 3567899999999998877653 3579999998876
Q ss_pred ceeeeeeccCCccce----EEEeecCc--eEEE--ecCCC------eEEEeeC-CCCcceeeeeeecCCcCceEE-EEEe
Q 038568 268 RMVFAEALWGHTGAL----LCLINVGD--LLAS--GSADR------TVRIWQR-GKENCYRCMAFLEGHEKPVKS-LVAI 331 (357)
Q Consensus 268 ~~~~~~~~~~~~~~v----~~~~~~~~--~l~~--~~~dg------~i~vw~~-~~~~~~~~~~~~~~h~~~v~~-~~~~ 331 (357)
....... .+...+ ..+.|+++ .|+. +..++ .|++||+ ..++. .+...+..+...+.. ++|+
T Consensus 292 ~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 292 CTKKHED--ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN-DNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp EEEEEEE--ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS-CCCCBSCCSSSCEEEEEEEE
T ss_pred ceEEEEe--ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc-cceeEeecCCeEEEeeeEEc
Confidence 4333221 122222 24566655 4443 55677 5777773 33310 012333333344554 6999
Q ss_pred eCCCCCCCCeEEEEE-cCCC--CeEEecC
Q 038568 332 SSSSSASNGIVSIGS-GSLN--GEIKVWD 357 (357)
Q Consensus 332 ~~~~~~~~~~~~l~s-~~~d--g~v~~wd 357 (357)
|+++ .|+. +..+ +.+++|+
T Consensus 369 pdg~-------~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 369 EKGN-------KIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp TTTT-------EEEEEESSSCTTCCEEEE
T ss_pred CCCC-------EEEEEEcCCCCcceEEEE
Confidence 9998 6654 4444 7888884
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=7.5e-22 Score=181.05 Aligned_cols=270 Identities=12% Similarity=0.019 Sum_probs=178.6
Q ss_pred cceeEEEEe--cceEEEeeCCceEEEeccCCcc--ccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCcc
Q 038568 30 MIISCLAVH--NSLLYAASLNEINVFDLISDYS--HVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASR 103 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~ 103 (357)
..|.+++|+ |++|++++...|++||+ .++. ....+.. +...+.+++|+||+ |+.++ ++.|.+||+.+++
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~~~i~~~d~-~~~~~~~~~~l~~---~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLGGELYLYDL-KQEGKAAVRQLTH---GEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp EESCCCEECTTSSEEEEEETTEEEEEES-SSCSTTSCCBCCC---SSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE
T ss_pred cCcceeEECCCCCEEEEEeCCcEEEEEC-CCCCcceEEEccc---CCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC
Confidence 348899999 89999988679999999 7762 4455555 88899999999998 66655 5799999998765
Q ss_pred ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCC-------------------
Q 038568 104 QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDR------------------- 162 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg------------------- 162 (357)
.......... . ...+...-+.......+.++.|+| +.|++++.|+
T Consensus 184 ~~~~~~~~~~---~-----------~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 184 QMQLTADGST---T-----------IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp EEECCCCCCS---S-----------EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred EEEeccCCcc---c-----------eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 4322211000 0 000000000001122357789999 7788887665
Q ss_pred --------------eEEEEEcCc-chhhhhccc-cccccEEEEEEecCC-eEEEEeC-----CCeEEEEEcccccccccc
Q 038568 163 --------------SFKIWNASN-YKCLESVNK-AHEDAVNAVVVSDNG-VVYTGSA-----DGRIRVWERSVVDHNKER 220 (357)
Q Consensus 163 --------------~i~iwd~~~-~~~~~~~~~-~~~~~v~~~~~~~~~-~l~~~~~-----d~~i~i~d~~~~~~~~~~ 220 (357)
.|.+||+.+ ++....... .+...+..++| ||| +|++++. +..|++||+.
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~-------- 320 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA-------- 320 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT--------
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC--------
Confidence 789999988 765433211 46778999999 999 4665443 5789999987
Q ss_pred ccceeeeeEeecccc----ceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEE-eecCc--eE-
Q 038568 221 KSRHMLVTTLVKHRS----TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCL-INVGD--LL- 292 (357)
Q Consensus 221 ~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~-~~~~~--~l- 292 (357)
..+....+..+.. .+..++|+|||+++++++.||.+++|.++.... ...+..+...+..+ .|+++ .|
T Consensus 321 --~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~s~dg~~l~ 395 (741)
T 2ecf_A 321 --SNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---AAALTHGNWSVDELLAVDEKAGLAY 395 (741)
T ss_dssp --TCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---EEESCCSSSCEEEEEEEETTTTEEE
T ss_pred --CCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---eeeeeecceEEEeEeEEeCCCCEEE
Confidence 2222333333322 456899999999999999999888887763222 33455666777665 46655 44
Q ss_pred EEecCCC--eEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 293 ASGSADR--TVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 293 ~~~~~dg--~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
++++.++ .++||++.... .....+.. ...+..++|+|+++
T Consensus 396 ~~~~~~~~~~~~l~~~~~~g--~~~~~l~~-~~~~~~~~~spdg~ 437 (741)
T 2ecf_A 396 FRAGIESARESQIYAVPLQG--GQPQRLSK-APGMHSASFARNAS 437 (741)
T ss_dssp EEECSSCTTCBEEEEEETTC--CCCEECCC-SCSEEEEEECTTSS
T ss_pred EEEeCCCCceEEEEEEEcCC--CCeeeccc-CCCceEEEECCCCC
Confidence 5566565 89999986421 22344444 56688999999998
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=1.6e-21 Score=166.60 Aligned_cols=210 Identities=12% Similarity=0.107 Sum_probs=143.8
Q ss_pred CCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEE
Q 038568 72 SGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV 149 (357)
Q Consensus 72 ~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 149 (357)
...++.++++++. +++++.|+ +++|+....... ......... ... ........+...|.+++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~---~~~~~~~~~-~~~-----------~~~~~~~~~~~~v~~l~ 99 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQ---NKPGDDPNK-IVD-----------KVQGLLVPMKFPIHHLA 99 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCC---CCTTCCTTC-EEE-----------CCCCEEECCSSCEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhh---cccccCccc-ccc-----------cCccccccCCCcccEEE
Confidence 3467889999876 77777777 899886432110 000000000 000 00000114567899999
Q ss_pred Eec--CeEE----EEecCCeEEEEEcCcc--------hh---hhhccccccccEEEEEEecC-C-eEEEEeCCCeEEEEE
Q 038568 150 VKQ--GLMY----SVSWDRSFKIWNASNY--------KC---LESVNKAHEDAVNAVVVSDN-G-VVYTGSADGRIRVWE 210 (357)
Q Consensus 150 ~~~--~~l~----~~~~dg~i~iwd~~~~--------~~---~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~d~~i~i~d 210 (357)
|++ ++|+ +++.|+.|++||++++ +. +..+ .+|...|.+++|+|+ + .|++++.||.|++||
T Consensus 100 ~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 100 LSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL-KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECC-CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeecc-CCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 999 7788 7888999999999775 11 2233 568899999999997 4 699999999999999
Q ss_pred ccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeecc----CCccceEEEe
Q 038568 211 RSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW----GHTGALLCLI 286 (357)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~----~~~~~v~~~~ 286 (357)
++ .........+|...|.+++|+|+|++|++|+.||.|++||++ ++....+.... .|...+.++.
T Consensus 179 ~~----------~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 179 VT----------ETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp ES----------SSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred cC----------CCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 98 223344556688999999999999999999999999999998 33222221111 2345889999
Q ss_pred ecCc--eE-EEecCCC------eEEEeeCCCC
Q 038568 287 NVGD--LL-ASGSADR------TVRIWQRGKE 309 (357)
Q Consensus 287 ~~~~--~l-~~~~~dg------~i~vw~~~~~ 309 (357)
|+++ ++ +....|| .+++|++++.
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9887 33 2233443 3899999864
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.90 E-value=2.8e-21 Score=183.13 Aligned_cols=292 Identities=10% Similarity=0.022 Sum_probs=196.2
Q ss_pred CccceeEEEEe--cceEEEee------CC-ceEEEeccCCccccceeccccCCCCce-------EEEEEecCc--eEEee
Q 038568 28 HHMIISCLAVH--NSLLYAAS------LN-EINVFDLISDYSHVDTFSNDLSSSGSV-------KSITFHITK--IFTAH 89 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~------~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v-------~~l~~~~~~--l~~~~ 89 (357)
|...|.+++|| |++||.++ .+ .|++|++ .+++ ...+.. |...+ ..++|+||+ +++++
T Consensus 51 ~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~-~~g~-~~~lt~---~~~~~~~~~~~~~~~~~SpDg~ll~~~~ 125 (1045)
T 1k32_A 51 NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG-ENGE-IKRITY---FSGKSTGRRMFTDVAGFDPDGNLIISTD 125 (1045)
T ss_dssp SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET-TTTE-EEECCC---CCEEEETTEECSEEEEECTTCCEEEEEC
T ss_pred CCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC-CCCC-eEEccc---CCCcccccccccccccCCCCCEEEEEEC
Confidence 99999999999 99999774 34 8999999 7765 556665 88888 999999998 55665
Q ss_pred cC------CeEEEEecCCccceeeeeecCccc-----------------------------------------------c
Q 038568 90 QD------CKIRVWKITASRQHQLVSTLPTVK-----------------------------------------------D 116 (357)
Q Consensus 90 ~d------~~i~vwd~~~~~~~~~~~~~~~~~-----------------------------------------------~ 116 (357)
.+ ..|.+|++.+++...... .+... .
T Consensus 126 ~~~~~~~~~~l~~~~~~~g~~~~l~~-~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~ 204 (1045)
T 1k32_A 126 AMQPFSSMTCLYRVENDGINFVPLNL-GPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMST 204 (1045)
T ss_dssp TTSSSTTCCEEEEEEGGGTEEEECCS-CSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSS
T ss_pred CcCCCcccceEEEEECCCCCeEEecC-CCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCC
Confidence 44 357788876654321111 00000 0
Q ss_pred ce-eeeecCCCeEEEec---------------ccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhc
Q 038568 117 RL-IRSVLPNNYVTVRR---------------HKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESV 178 (357)
Q Consensus 117 ~~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~ 178 (357)
.. ...+.++ .+.+.. .....+..|. .+...+|+| +.++.+ .++.|.+||+... .+..+
T Consensus 205 ~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l 280 (1045)
T 1k32_A 205 HVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTE-KIEKI 280 (1045)
T ss_dssp CCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTC-CEEEC
T ss_pred cccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCce-Eeeee
Confidence 00 0000011 111110 0111122222 344567777 455555 4778888887332 22233
Q ss_pred ccc-----------ccccEEEEEEe-cCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeecccc-ceeEEEEec
Q 038568 179 NKA-----------HEDAVNAVVVS-DNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRS-TVNALALNG 244 (357)
Q Consensus 179 ~~~-----------~~~~v~~~~~~-~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~ 244 (357)
.. +...+.+++|+ |+|. +++++ ++.+.+|++. . .. ...+..|.. .+..++|+
T Consensus 281 -~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~------~----~~-~~~~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 281 -EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS------G----TY-VLKVPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp -CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT------S----SB-EEECSCCSCEEEEEECSS-
T ss_pred -ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC------C----Cc-eEEccCCCcceEEeeeEc-
Confidence 12 23468899999 9995 66665 8899999986 1 11 223455666 88999999
Q ss_pred CCCEEEEEecCCeEE-EEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCC
Q 038568 245 DGSLLFSGGCDRWIV-VWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGH 321 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~-vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h 321 (357)
+|+.|+.++.++.+. +||+.++... .+.+|...+..++|+|+ +|++++.++.|++||+.++ +......+|
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~----~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg---~~~~~~~~~ 419 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAE----KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG---KPTVIERSR 419 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEE----ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC---CEEEEEECS
T ss_pred CCCeEEEEECCCceEEEEECCCCCce----EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC---ceEEeccCC
Confidence 999999998888898 9999876532 23367778888888876 8999999999999999987 344455578
Q ss_pred cCceEEEEEeeCCCCCCCCeEEEEEcCCCC----------eEEecC
Q 038568 322 EKPVKSLVAISSSSSASNGIVSIGSGSLNG----------EIKVWD 357 (357)
Q Consensus 322 ~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg----------~v~~wd 357 (357)
...+.+++|+||++ +|++++.++ .|++||
T Consensus 420 ~~~v~~~~~SpDG~-------~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 420 EAMITDFTISDNSR-------FIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp SSCCCCEEECTTSC-------EEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred CCCccceEECCCCC-------eEEEEecCccccccCCCCCeEEEEE
Confidence 89999999999998 888877644 899996
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=1.3e-19 Score=151.77 Aligned_cols=279 Identities=8% Similarity=0.048 Sum_probs=171.4
Q ss_pred ceEEEee----CC-ceEEEecc-CCccccceeccccCCCCceEEEEEecCc--eEEeecC----CeEEEEecCCc-ccee
Q 038568 40 SLLYAAS----LN-EINVFDLI-SDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQD----CKIRVWKITAS-RQHQ 106 (357)
Q Consensus 40 ~~l~t~~----~d-~i~iw~~~-~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d----~~i~vwd~~~~-~~~~ 106 (357)
.++++|+ .+ .|.+|++. .+++....... +...+..++|+|++ |++++.+ +.|.+|+++.. ....
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~---~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA---EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE---ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc---cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 3445553 45 88888772 22333222222 45677789999987 7777765 79999998763 2222
Q ss_pred eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEe-cCCeEEEEEcCcchhhhhcc------
Q 038568 107 LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVS-WDRSFKIWNASNYKCLESVN------ 179 (357)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~------ 179 (357)
.+.... .+......+++..+++++++ .++.|.+|++.....+..+.
T Consensus 91 ~~~~~~---------------------------~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~ 143 (361)
T 3scy_A 91 LLNTQK---------------------------TMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFK 143 (361)
T ss_dssp EEEEEE---------------------------CSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECC
T ss_pred EeeEec---------------------------cCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEcc
Confidence 222211 23345666777446666665 58899999997544333221
Q ss_pred -------ccccccEEEEEEecCCe-EEE-EeCCCeEEEEEccccccccccc-cce--eeeeEeeccccceeEEEEecCCC
Q 038568 180 -------KAHEDAVNAVVVSDNGV-VYT-GSADGRIRVWERSVVDHNKERK-SRH--MLVTTLVKHRSTVNALALNGDGS 247 (357)
Q Consensus 180 -------~~~~~~v~~~~~~~~~~-l~~-~~~d~~i~i~d~~~~~~~~~~~-~~~--~~~~~~~~~~~~v~~~~~~~~~~ 247 (357)
..+...+.+++|+|++. +++ ...++.|.+|++.......... ... ............+..++|+|+|+
T Consensus 144 g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~ 223 (361)
T 3scy_A 144 GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK 223 (361)
T ss_dssp CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC
Confidence 01123468899999994 544 4458999999987211000000 000 00111223445678999999999
Q ss_pred EEEEEe-cCCeEEEEecccCCce--eeeeeccCCccceEEEeecCc--eEEEecC--CCeEEEeeCCC-Ccceeeeeeec
Q 038568 248 LLFSGG-CDRWIVVWERERDHRM--VFAEALWGHTGALLCLINVGD--LLASGSA--DRTVRIWQRGK-ENCYRCMAFLE 319 (357)
Q Consensus 248 ~l~~~~-~dg~i~vwd~~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~l~~~~~--dg~i~vw~~~~-~~~~~~~~~~~ 319 (357)
++++++ .++.|.+|++.++... ........+......++|+++ +|+++.. ++.|.+|++.. ....+.+..+.
T Consensus 224 ~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~ 303 (361)
T 3scy_A 224 FAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL 303 (361)
T ss_dssp EEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec
Confidence 887777 5899999999865321 112222333344567778766 6655554 58999999962 22234455554
Q ss_pred CCcCceEEEEEeeCCCCCCCCeEEEEEcC-CCCeEEec
Q 038568 320 GHEKPVKSLVAISSSSSASNGIVSIGSGS-LNGEIKVW 356 (357)
Q Consensus 320 ~h~~~v~~~~~~~~~~~~~~~~~~l~s~~-~dg~v~~w 356 (357)
. ...+.+++|+|+++ +|++++ .++.|.+|
T Consensus 304 ~-g~~~~~~~~spdg~-------~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 304 T-GIHPRNFIITPNGK-------YLLVACRDTNVIQIF 333 (361)
T ss_dssp C-SSCCCEEEECTTSC-------EEEEEETTTTEEEEE
T ss_pred C-CCCCceEEECCCCC-------EEEEEECCCCCEEEE
Confidence 4 56788999999998 776665 77899996
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=5.6e-20 Score=153.24 Aligned_cols=255 Identities=11% Similarity=0.100 Sum_probs=162.7
Q ss_pred CccceeEEEEe--cceEEEeeC--C-ceEEEeccCCcc--ccceeccccCCCCceEEEEEecCc--eEEee-cCCeEEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASL--N-EINVFDLISDYS--HVDTFSNDLSSSGSVKSITFHITK--IFTAH-QDCKIRVW 97 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~--d-~i~iw~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~-~d~~i~vw 97 (357)
+...+..++|+ |++++++.. + .|++|++ ++++ .+..+.. +...+..++|+|++ |++++ .++.+.+|
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~-~~g~~~~~~~~~~---~~~~p~~~a~spdg~~l~~~~~~~~~v~v~ 113 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQI-DGQTAHKLNTVVA---PGTPPAYVAVDEARQLVYSANYHKGTAEVM 113 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEE-ETTEEEEEEEEEE---ESCCCSEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEe-cCCcEEEeeeeec---CCCCCEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 55667889999 664444432 6 9999999 6654 3444444 67788999999987 66666 78999999
Q ss_pred ecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcC-cchh
Q 038568 98 KITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNAS-NYKC 174 (357)
Q Consensus 98 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~-~~~~ 174 (357)
++........+........ . .....+...+.+++|+| +++++...++.|.+||+. +++.
T Consensus 114 ~~~~~g~~~~~~~~~~~~~-----------------~-p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGH-----------------G-PRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp EECTTSCEEEEEEEECCCC-----------------C-SSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE
T ss_pred EeCCCCCeeecceeecCCC-----------------C-CCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE
Confidence 9964332222222110000 0 00002334688999999 655555568899999998 4432
Q ss_pred h--hhccccccccEEEEEEecCCe-EEE-EeCCCeEEEEEccccccccccccceeeeeEeeccc------cceeEEEEec
Q 038568 175 L--ESVNKAHEDAVNAVVVSDNGV-VYT-GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHR------STVNALALNG 244 (357)
Q Consensus 175 ~--~~~~~~~~~~v~~~~~~~~~~-l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~------~~v~~~~~~~ 244 (357)
. ..+.......+..++|+|++. +++ ...++.|.+|++.. ..........+.... ..+..++|+|
T Consensus 176 ~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 176 SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT------QTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET------TTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC------CCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 2 111122334678899999994 444 56789999999872 111122222222222 4588999999
Q ss_pred CCCEEE-EEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecC-CCeEEEeeC--CCCc
Q 038568 245 DGSLLF-SGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSA-DRTVRIWQR--GKEN 310 (357)
Q Consensus 245 ~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~-dg~i~vw~~--~~~~ 310 (357)
+|++|+ +...++.|.+|++...........+..+...+..++|+++ +|++++. ++.|.+|++ .+++
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 999775 5556899999999744333445555555556777888766 6766665 589999954 4553
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=3.6e-21 Score=156.53 Aligned_cols=218 Identities=10% Similarity=0.004 Sum_probs=155.4
Q ss_pred EeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeE
Q 038568 87 TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSF 164 (357)
Q Consensus 87 ~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i 164 (357)
.++.|++|++||+.+++..... .|...+.+++|+| ++|++++ ++.|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~-------------------------------~~~~~v~~~~~spdg~~l~~~~-~~~i 64 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW-------------------------------QTPELFEAPNWSPDGKYLLLNS-EGLL 64 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE-------------------------------EESSCCEEEEECTTSSEEEEEE-TTEE
T ss_pred CCCcceeEEEEeCCCCceeeec-------------------------------cCCcceEeeEECCCCCEEEEEc-CCeE
Confidence 4567899999999887643222 6678899999999 6677765 8899
Q ss_pred EEEEcCc-chhhhhccccccccEEEEEEecCC-eEEEEe--CCCeEEEEEccccccccccccceeeeeEeeccccceeEE
Q 038568 165 KIWNASN-YKCLESVNKAHEDAVNAVVVSDNG-VVYTGS--ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNAL 240 (357)
Q Consensus 165 ~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 240 (357)
.+||+.+ ++........+...+.+++|+|++ +|++++ .++...+|.+.. . ......+.. ...+..+
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~------~---~~~~~~~~~-~~~~~~~ 134 (297)
T 2ojh_A 65 YRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS------T---GGTPRLMTK-NLPSYWH 134 (297)
T ss_dssp EEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET------T---CCCCEECCS-SSSEEEE
T ss_pred EEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC------C---CCceEEeec-CCCccce
Confidence 9999998 776655522234778999999999 577777 345666666541 0 111222332 3348889
Q ss_pred EEecCCCEEE-EEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEec-CCCeEEEeeCCCCcceeeee
Q 038568 241 ALNGDGSLLF-SGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGS-ADRTVRIWQRGKENCYRCMA 316 (357)
Q Consensus 241 ~~~~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~-~dg~i~vw~~~~~~~~~~~~ 316 (357)
+|+|++++|+ ++..++.+++|+++.... ....+..+...+.++.|+++ +|+.++ .++.+++|++.... ..+.
T Consensus 135 ~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~~ 210 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSVE 210 (297)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCEE
T ss_pred EECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC--CCcE
Confidence 9999999877 778899999999753221 22345567778888999876 565554 68999999986321 3355
Q ss_pred eecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCC-----------CeEEecC
Q 038568 317 FLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLN-----------GEIKVWD 357 (357)
Q Consensus 317 ~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~d-----------g~v~~wd 357 (357)
.+..|...+..++|+|+++ +|++++.+ +.|.+||
T Consensus 211 ~~~~~~~~~~~~~~s~dg~-------~l~~~~~~~~~~~~~~~~~~~l~~~d 255 (297)
T 2ojh_A 211 RITDSAYGDWFPHPSPSGD-------KVVFVSYDADVFDHPRDLDVRVQLMD 255 (297)
T ss_dssp ECCCCSEEEEEEEECTTSS-------EEEEEEEETTCCSCCSSEEEEEEEEE
T ss_pred EEecCCcccCCeEECCCCC-------EEEEEEcCCCCCcccccCceEEEEEe
Confidence 6677888899999999998 88877765 4688885
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=4.9e-20 Score=152.53 Aligned_cols=247 Identities=7% Similarity=0.025 Sum_probs=163.3
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEEEeeC-C-ceEEEeccCCccc-cceeccccCCCCceEEEEEecCc--
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASL-N-EINVFDLISDYSH-VDTFSNDLSSSGSVKSITFHITK-- 84 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~-d-~i~iw~~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~-- 84 (357)
.+++....+.. +...+ +++|+ ++++++++. + .|.+||. .+++. ...+.. +..+..+++|+|++
T Consensus 28 ~~~~~~~~~~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~-~~~~~~~~~~~~---~~~~~~~~~~s~dg~~ 97 (331)
T 3u4y_A 28 DTLEILNQITL-----GYDFV-DTAITSDCSNVVVTSDFCQTLVQIET-QLEPPKVVAIQE---GQSSMADVDITPDDQF 97 (331)
T ss_dssp TTCCEEEEEEC-----CCCEE-EEEECSSSCEEEEEESTTCEEEEEEC-SSSSCEEEEEEE---CSSCCCCEEECTTSSE
T ss_pred cccceeeeEEc-----cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEEC-CCCceeEEeccc---CCCCccceEECCCCCE
Confidence 34555566554 45556 99998 776766665 6 9999999 88777 666665 66666669999987
Q ss_pred eEEeecCC---eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEE-E
Q 038568 85 IFTAHQDC---KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYS-V 158 (357)
Q Consensus 85 l~~~~~d~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~-~ 158 (357)
++++..++ .|.+||+.+++....+. ......+++|+| +++++ .
T Consensus 98 l~~~~~~~~~~~i~v~d~~~~~~~~~~~-------------------------------~~~~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 98 AVTVTGLNHPFNMQSYSFLKNKFISTIP-------------------------------IPYDAVGIAISPNGNGLILID 146 (331)
T ss_dssp EEECCCSSSSCEEEEEETTTTEEEEEEE-------------------------------CCTTEEEEEECTTSSCEEEEE
T ss_pred EEEecCCCCcccEEEEECCCCCeEEEEE-------------------------------CCCCccceEECCCCCEEEEEe
Confidence 66554442 89999998876544332 223458999999 44554 4
Q ss_pred ecCCe-EEEEEcCcchhhh----hccccccccEEEEEEecCCe-E-EEEeCCCeEEEEEccccccccccccceeeeeEee
Q 038568 159 SWDRS-FKIWNASNYKCLE----SVNKAHEDAVNAVVVSDNGV-V-YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV 231 (357)
Q Consensus 159 ~~dg~-i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 231 (357)
..++. |.+|++.....+. .. .........++|+|++. + +++..++.|++||+.. ... ...+..+.
T Consensus 147 ~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~------~~~-~~~~~~~~ 218 (331)
T 3u4y_A 147 RSSANTVRRFKIDADGVLFDTGQEF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN------PEN-ITLLNAVG 218 (331)
T ss_dssp ETTTTEEEEEEECTTCCEEEEEEEE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS------TTS-CEEEEEEE
T ss_pred cCCCceEEEEEECCCCcEeecCCcc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC------Ccc-cceeeecc
Confidence 55588 9999987533321 11 23345678999999994 4 4555689999999872 111 11133444
Q ss_pred ccccceeEEEEecCCCEEEEEe-cCCeEEEEecccCCceeeeeeccCC----ccce---EEEeecCc--eE-EEecCCCe
Q 038568 232 KHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERDHRMVFAEALWGH----TGAL---LCLINVGD--LL-ASGSADRT 300 (357)
Q Consensus 232 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~----~~~v---~~~~~~~~--~l-~~~~~dg~ 300 (357)
....+..++|+|+|++|+++. .++.|.+||+.+++... ...+..+ .... ..++|+++ +| +++..++.
T Consensus 219 -~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 296 (331)
T 3u4y_A 219 -TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF-VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRE 296 (331)
T ss_dssp -CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE-EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTE
T ss_pred -CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee-ecccccccccCCCCcccccceEECCCCCEEEEecCCCCc
Confidence 346678999999999776655 57889999998775421 1111111 1221 33555554 55 55566789
Q ss_pred EEEeeCCCC
Q 038568 301 VRIWQRGKE 309 (357)
Q Consensus 301 i~vw~~~~~ 309 (357)
|.+||+...
T Consensus 297 v~v~d~~~~ 305 (331)
T 3u4y_A 297 LKVFTISGK 305 (331)
T ss_dssp EEEEETTSC
T ss_pred EEEEEecCC
Confidence 999999874
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=5.1e-20 Score=153.75 Aligned_cols=235 Identities=11% Similarity=0.093 Sum_probs=166.3
Q ss_pred CCCceEEEEEecCc--eEEeec-------CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccc
Q 038568 71 SSGSVKSITFHITK--IFTAHQ-------DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEH 141 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~-------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
....+..++|+|++ +++++. ++.|.+||..+++....+..
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------------------------------- 87 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN------------------------------- 87 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-------------------------------
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-------------------------------
Confidence 45578899999986 555552 67899999998876554432
Q ss_pred cccEEEEEEec--C-eEEEEecCCeEEEEEcCcchhhhhccccccc--------cEEEEEEecCC-eEEEEe--CCCeEE
Q 038568 142 WDAVSDLVVKQ--G-LMYSVSWDRSFKIWNASNYKCLESVNKAHED--------AVNAVVVSDNG-VVYTGS--ADGRIR 207 (357)
Q Consensus 142 ~~~v~~~~~~~--~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--------~v~~~~~~~~~-~l~~~~--~d~~i~ 207 (357)
...+..+++++ + .+++...++.|.+||..+++.+..+...... .+.+++++|++ ++++++ .++.|.
T Consensus 88 ~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 88 DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE
T ss_pred CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE
Confidence 23356788888 5 4455566799999999998887776322211 27889999998 455554 588999
Q ss_pred EEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeee-ccCCccceEEEe
Q 038568 208 VWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEA-LWGHTGALLCLI 286 (357)
Q Consensus 208 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~v~~~~ 286 (357)
+||+. ..+....+..+...+.+++|+|++++|++++.++.|.+||+.+++....... ..++...+..++
T Consensus 168 ~~d~~----------~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 168 VVDGG----------NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINIS 237 (353)
T ss_dssp EEETT----------TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEE
T ss_pred EEcCC----------CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEE
Confidence 99987 3444555554556688999999999999999999999999998775433332 112455566677
Q ss_pred ecCc--eEEEe-cCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 287 NVGD--LLASG-SADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 287 ~~~~--~l~~~-~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++++ +++++ ..++.|.+||..+++. +..+.... ...++|+|+++ .++++...++.|.+||
T Consensus 238 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~~--~~~~~~s~dg~------~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 238 LDTARQRAFITDSKAAEVLVVDTRNGNI---LAKVAAPE--SLAVLFNPARN------EAYVTHRQAGKVSVID 300 (353)
T ss_dssp EETTTTEEEEEESSSSEEEEEETTTCCE---EEEEECSS--CCCEEEETTTT------EEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEEcCC--CceEEECCCCC------EEEEEECCCCeEEEEE
Confidence 7654 55444 4569999999998743 33333322 25799999987 3455666799999996
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=1.5e-20 Score=156.64 Aligned_cols=258 Identities=9% Similarity=0.026 Sum_probs=166.0
Q ss_pred EEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCC-CceEEEEEecCc---eEEeecCCeEEEEecCCccceee
Q 038568 35 LAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSS-GSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQL 107 (357)
Q Consensus 35 ~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~ 107 (357)
++++ +.++++++.+ .|++||. .+++.+..+.. +. ..+..++|+|++ +++...++.|.+||+.+++....
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~-~~~~~~~~~~~---~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDV-ASDTVYKSCVM---PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEET-TTTEEEEEEEC---SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEEC-CCCcEEEEEec---CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 4455 6788888888 9999999 88888877764 22 257899999986 45556789999999988765443
Q ss_pred eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC------------CeEEEEEcCcch
Q 038568 108 VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD------------RSFKIWNASNYK 173 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d------------g~i~iwd~~~~~ 173 (357)
+...... ......+..++|+| +++++++.+ +.|.+||+.+++
T Consensus 81 ~~~~~~~------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 81 ANLSSVP------------------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EESCCST------------------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred EEccccc------------------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 3211000 00123467889998 678888765 899999999866
Q ss_pred hhhhcc-ccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccc------------------
Q 038568 174 CLESVN-KAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHR------------------ 234 (357)
Q Consensus 174 ~~~~~~-~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~------------------ 234 (357)
....+. ..+...+.+++|+|++.+++++. .|.+||+... +....+..+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (349)
T 1jmx_B 137 EAKPVRTFPMPRQVYLMRAADDGSLYVAGP--DIYKMDVKTG----------KYTVALPLRNWNRKGYSAPDVLYFWPHQ 204 (349)
T ss_dssp GBCCSEEEECCSSCCCEEECTTSCEEEESS--SEEEECTTTC----------CEEEEECSTTCCCTTBCCCBCCCCCCCC
T ss_pred ccceeeeccCCCcccceeECCCCcEEEccC--cEEEEeCCCC----------ceeccccccccCCccccCccceeeecCC
Confidence 544321 13344688999999997666543 4999998722 2222222111
Q ss_pred ------cceeEEEEecCCCE-----------EEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC-c--eEEE
Q 038568 235 ------STVNALALNGDGSL-----------LFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG-D--LLAS 294 (357)
Q Consensus 235 ------~~v~~~~~~~~~~~-----------l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~--~l~~ 294 (357)
.....+++++++.. +.....++.+++|++. .+...+..+.+++ + ++++
T Consensus 205 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~sp~dg~~l~~ 272 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA------------DLTELYFTGLRSPKDPNQIYG 272 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE------------ECSSCEEEEEECSSCTTEEEE
T ss_pred CcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc------------cCCCcceeeEecCCCCCEEEE
Confidence 02344666654421 1122223344444332 2334556666666 4 6776
Q ss_pred ecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 295 GSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 295 ~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+ ++.|.+||+.++ +.+..+.. ...+.+++|+|+++ +|++++.++.|++||
T Consensus 273 ~--~~~v~~~d~~~~---~~~~~~~~-~~~~~~~~~s~dg~-------~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 273 V--LNRLAKYDLKQR---KLIKAANL-DHTYYCVAFDKKGD-------KLYLGGTFNDLAVFN 322 (349)
T ss_dssp E--ESEEEEEETTTT---EEEEEEEC-SSCCCEEEECSSSS-------CEEEESBSSEEEEEE
T ss_pred E--cCeEEEEECccC---eEEEEEcC-CCCccceEECCCCC-------EEEEecCCCeEEEEe
Confidence 6 889999999987 43444432 34578999999987 777788899999997
No 154
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=7.7e-20 Score=167.31 Aligned_cols=281 Identities=7% Similarity=-0.038 Sum_probs=172.8
Q ss_pred cceecccccCCCCCCCcc---ceeEEEEe--cceEEEeeC---------C-ceEEEeccCCccccceeccccCCCCceEE
Q 038568 13 KHHCIASLKIPSPDPHHM---IISCLAVH--NSLLYAASL---------N-EINVFDLISDYSHVDTFSNDLSSSGSVKS 77 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~---~i~~~~~s--~~~l~t~~~---------d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~ 77 (357)
++++...+.. |.. .|.+++|+ |++|++++. + .|.+||+ ++++. ..+.....|...+..
T Consensus 46 ~g~~~~~~~~-----~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~-~~~~~-~~l~~~~~~~~~~~~ 118 (723)
T 1xfd_A 46 TNTSTVLIEG-----KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI-PHGDP-QSLDPPEVSNAKLQY 118 (723)
T ss_dssp GCCCEEEECT-----TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES-SSCCC-EECCCTTCCSCCCSB
T ss_pred CCcEEEEecc-----ccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC-CCCce-EeccCCccccccccc
Confidence 4455555553 544 49999999 999999876 3 5779999 77665 333332225566899
Q ss_pred EEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccc---------cccEE
Q 038568 78 ITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEH---------WDAVS 146 (357)
Q Consensus 78 l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~v~ 146 (357)
++|+||+ |+.++. +.|++||+.+++.......... . .++.++ ...+.
T Consensus 119 ~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~--~-------------------~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 119 AGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE--G-------------------VIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp CCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT--T-------------------TEEEEECCHHHHHTTSSSSE
T ss_pred cEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC--C-------------------ceECcccceeEEEEeccCcc
Confidence 9999998 776665 8999999988765433221000 0 000011 11336
Q ss_pred EEEEec--CeEEEEecCC----------------------------------eEEEEEcCcchhhhhcccc------ccc
Q 038568 147 DLVVKQ--GLMYSVSWDR----------------------------------SFKIWNASNYKCLESVNKA------HED 184 (357)
Q Consensus 147 ~~~~~~--~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~~~ 184 (357)
+++|+| +.|++++.|+ .|++||+.+++....+ .. +..
T Consensus 177 ~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l-~~~~~~~~~~~ 255 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM-MPPDDPRMREY 255 (723)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC-CCCCCGGGSSE
T ss_pred eEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe-eCCccCCCccc
Confidence 788888 6677666442 7999999988765555 22 256
Q ss_pred cEEEEEEecCCe-EEEEeC----CCeEEEEEccccccccccccceeeeeEee-ccccce----eEEEEecCCCEEEE--E
Q 038568 185 AVNAVVVSDNGV-VYTGSA----DGRIRVWERSVVDHNKERKSRHMLVTTLV-KHRSTV----NALALNGDGSLLFS--G 252 (357)
Q Consensus 185 ~v~~~~~~~~~~-l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~v----~~~~~~~~~~~l~~--~ 252 (357)
.+..++|+|||. +++... +..|++||+. ..+....+. .+...+ ..++|+|||+.|+. +
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~----------~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDAT----------TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETT----------TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC----------CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 789999999995 544432 3579999987 222222222 223333 37899999997765 4
Q ss_pred ecCC------eEEEEe-cccCCceeeeeeccCCccceE-EEeecCc--eEEEe-cCC--CeEEEeeCCCCcceeeeeeec
Q 038568 253 GCDR------WIVVWE-RERDHRMVFAEALWGHTGALL-CLINVGD--LLASG-SAD--RTVRIWQRGKENCYRCMAFLE 319 (357)
Q Consensus 253 ~~dg------~i~vwd-~~~~~~~~~~~~~~~~~~~v~-~~~~~~~--~l~~~-~~d--g~i~vw~~~~~~~~~~~~~~~ 319 (357)
..++ .|.+|| ...+... ....+..+...+. .++|+++ .|+.. ..+ +.+++|++...... ....+.
T Consensus 326 ~~~~~~~~~~~l~~~d~~~~~~~~-~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~-~~~~l~ 403 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSSSQPNSSND-NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNF-NRQCLS 403 (723)
T ss_dssp ECCSSSSCEEEEEEECSSCCSSSC-CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTC-CCBCSS
T ss_pred cccCCCcceeEEEEEeccCCCCcc-ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCC-Ccceec
Confidence 4566 577777 3333200 0122222233333 3466655 66544 444 88999998753211 122233
Q ss_pred C---CcCceEEEEEeeCCC
Q 038568 320 G---HEKPVKSLVAISSSS 335 (357)
Q Consensus 320 ~---h~~~v~~~~~~~~~~ 335 (357)
. |...+..++|+|+++
T Consensus 404 ~~~~~~~~~~~~~~spdg~ 422 (723)
T 1xfd_A 404 CDLVENCTYFSASFSHSMD 422 (723)
T ss_dssp TTSSSSCCCCEEEECTTSS
T ss_pred ccccCCCCeEEEEECCCCC
Confidence 2 667789999999987
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=2e-20 Score=166.84 Aligned_cols=227 Identities=11% Similarity=0.033 Sum_probs=159.6
Q ss_pred CCCceEEEEEecCc--eEEeec-CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEE
Q 038568 71 SSGSVKSITFHITK--IFTAHQ-DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD 147 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (357)
+..+|.+++|+||+ |++++. ||+++||++.+++.. .+.. .+...+..
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~-----------------------------~~~~~~~~ 69 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNR-----------------------------EPINSVLD 69 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCS-----------------------------SCCSEECE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeec-----------------------------cccccccc
Confidence 45689999999997 887776 999999998655432 2210 33357889
Q ss_pred EEEec-CeEEEEec---CCeEEEEEcCc--chhhhhccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccc
Q 038568 148 LVVKQ-GLMYSVSW---DRSFKIWNASN--YKCLESVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 148 ~~~~~-~~l~~~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
+.|+| +.+++++. +....+|.+.. ......+ .........+|+|++ .+++.+.++.+.+||+. .
T Consensus 70 ~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l--~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~------~ 141 (582)
T 3o4h_A 70 PHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRL--EAVKPMRILSGVDTGEAVVFTGATEDRVALYALD------G 141 (582)
T ss_dssp ECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEEC--TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEE------T
T ss_pred ccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccc--cCCCCceeeeeCCCCCeEEEEecCCCCceEEEcc------C
Confidence 99999 56666664 45556665543 2111133 112223356777777 34444455555699987 1
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecC----CeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEE
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLA 293 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~ 293 (357)
.+...... +.. .+++|+|||++|++++.+ +.|++||+.+++.. .+..|...+..++|+|+ .|+
T Consensus 142 ----g~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~----~l~~~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 142 ----GGLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR----VFDSGEGSFSSASISPGMKVTA 210 (582)
T ss_dssp ----TEEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE----EECCSSCEEEEEEECTTSCEEE
T ss_pred ----CcEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce----EeecCCCccccceECCCCCEEE
Confidence 22222222 222 789999999999988877 78999999877632 44567888888999887 788
Q ss_pred EecCCC--eEEEeeCCCCcceeeeeeecCCcCceEEEE--------EeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 294 SGSADR--TVRIWQRGKENCYRCMAFLEGHEKPVKSLV--------AISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 294 ~~~~dg--~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
++..++ .|++||+.+++ .. .+.+|...+..+. |+||+. ++++++.||.+++|+
T Consensus 211 ~~~~~~~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-------~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 211 GLETAREARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDGR-------LAVVARREGRSAVFI 273 (582)
T ss_dssp EEECSSCEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTSC-------EEEEEEETTEEEEEE
T ss_pred EccCCCeeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCCc-------EEEEEEcCCcEEEEE
Confidence 888888 89999999873 33 5667777777777 999997 999999999999995
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=1.7e-19 Score=149.48 Aligned_cols=243 Identities=9% Similarity=0.066 Sum_probs=163.6
Q ss_pred ccceecccccCCCCCCCcc-ceeEEEEe--cceEE-EeeCC-ceEEEeccCCccccceeccccC--CCCceEEEEEecCc
Q 038568 12 FKHHCIASLKIPSPDPHHM-IISCLAVH--NSLLY-AASLN-EINVFDLISDYSHVDTFSNDLS--SSGSVKSITFHITK 84 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~-~i~~~~~s--~~~l~-t~~~d-~i~iw~~~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~ 84 (357)
.+.+.++.+.. + +.. .+.+++|+ +++++ +++.+ .|.+||+ .+++.+..+..... +...+..++|+|++
T Consensus 19 ~~~~~~~~~~~--~--~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 93 (337)
T 1pby_B 19 EKMAVDKVITI--A--DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL-VTGETLGRIDLSTPEERVKSLFGAALSPDG 93 (337)
T ss_dssp TTTEEEEEEEC--T--TCTTCCCCEEECTTSSEEEEEETTTTEEEEEET-TTCCEEEEEECCBTTEEEECTTCEEECTTS
T ss_pred CCCcEEEEEEc--C--CCCCCccceEEcCCCCEEEEEeCCCCeEEEEEC-CCCCeEeeEEcCCcccccccccceEECCCC
Confidence 34566666652 1 222 58889998 66654 55566 9999999 88887776653100 11267789999987
Q ss_pred --eEEee------------cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE
Q 038568 85 --IFTAH------------QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150 (357)
Q Consensus 85 --l~~~~------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 150 (357)
++++. .++.|.+||+.+++....+. ....+.+++|
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-------------------------------~~~~~~~~~~ 142 (337)
T 1pby_B 94 KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-------------------------------APRQITMLAW 142 (337)
T ss_dssp SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-------------------------------CCSSCCCEEE
T ss_pred CEEEEEecccccccccccccCceEEEEECCCCcEEEEEe-------------------------------CCCCcceeEE
Confidence 66664 57999999998776543332 1234667889
Q ss_pred ec--CeEEEEecCCeEEEEEcCcchhhhhccccc-cccEEEEEEecCCe-EEEEe-CCC---------------------
Q 038568 151 KQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAH-EDAVNAVVVSDNGV-VYTGS-ADG--------------------- 204 (357)
Q Consensus 151 ~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-l~~~~-~d~--------------------- 204 (357)
+| ++++++ ++.|.+||+.+++.+..+.... .. .+.|+|++. ++..+ .++
T Consensus 143 s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (337)
T 1pby_B 143 ARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEA---ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAY 217 (337)
T ss_dssp CTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTT---TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGE
T ss_pred CCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCC---CceeCCCccEEeeeccCCCceeeeeecccccccccccccc
Confidence 98 667776 6899999999888776652222 12 236788874 43333 233
Q ss_pred --eEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccce
Q 038568 205 --RIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGAL 282 (357)
Q Consensus 205 --~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v 282 (357)
.|.+||+. .... . ...+..+...+.+++|+|++++++++ ++.|++||+.+++....+. ....+
T Consensus 218 ~~~v~~~d~~------~~~~--~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~----~~~~~ 282 (337)
T 1pby_B 218 RTGLLTMDLE------TGEM--A-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP----LPHSY 282 (337)
T ss_dssp EEEEEEEETT------TCCE--E-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE----CSSCC
T ss_pred ccceEEEeCC------CCCc--e-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec----CCCce
Confidence 46888887 2211 1 23344566678899999999999888 7999999998876433322 12345
Q ss_pred EEEeecCc--eEEEecCCCeEEEeeCCCCc
Q 038568 283 LCLINVGD--LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 283 ~~~~~~~~--~l~~~~~dg~i~vw~~~~~~ 310 (357)
.+++|+++ +|++++.++.|++||+.+++
T Consensus 283 ~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp CEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred eeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 66777655 78888889999999999874
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=2.1e-18 Score=144.54 Aligned_cols=271 Identities=9% Similarity=0.068 Sum_probs=164.6
Q ss_pred eEEEeeC--C-ceEEEecc-CCccccceeccc-cCCCCceEEEEEecCc--eEEeecCCeEEEEecC-CccceeeeeecC
Q 038568 41 LLYAASL--N-EINVFDLI-SDYSHVDTFSND-LSSSGSVKSITFHITK--IFTAHQDCKIRVWKIT-ASRQHQLVSTLP 112 (357)
Q Consensus 41 ~l~t~~~--d-~i~iw~~~-~~~~~~~~~~~~-~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~-~~~~~~~~~~~~ 112 (357)
++++|+. + .|.+|++. ++++. ..+... ......+..++|+|++ |++++.+ .|.+|++. +++....... +
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l-~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~-~ 80 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTC-KLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH-P 80 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEE-EEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE-E
T ss_pred EEEEEEccCCCcEEEEEEECCCCCE-EEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe-e
Confidence 4555653 3 57777762 23332 222110 0133467899999987 7777777 99999997 5543221110 0
Q ss_pred ccccceeeeecCCCeEEEecccccccccccccEEEEEEec--C--eEEEEe-------------cCCeEEEEEcC-cchh
Q 038568 113 TVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--G--LMYSVS-------------WDRSFKIWNAS-NYKC 174 (357)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~--~l~~~~-------------~dg~i~iwd~~-~~~~ 174 (357)
.+ +....++|+| + +++++. .+|.+.+|++. .++.
T Consensus 81 ---------------------------~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~ 132 (365)
T 1jof_A 81 ---------------------------IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL 132 (365)
T ss_dssp ---------------------------CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE
T ss_pred ---------------------------cC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC
Confidence 00 1123466777 3 244443 68999999997 3554
Q ss_pred hhhccc---cccccEEEEEEecCCe-EEEEe-CCCeEEEEEccccccccccccceeeeeEee--ccccceeEEEEecCCC
Q 038568 175 LESVNK---AHEDAVNAVVVSDNGV-VYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTLV--KHRSTVNALALNGDGS 247 (357)
Q Consensus 175 ~~~~~~---~~~~~v~~~~~~~~~~-l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 247 (357)
...+.. .+...+.+++|+|+|. ++++. .++.|++||+.. ......+..+. .+...+..++|+|+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~-------~g~~~~~~~~~~~~~g~~p~~~~~spdg~ 205 (365)
T 1jof_A 133 EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA-------SGEVELVGSVDAPDPGDHPRWVAMHPTGN 205 (365)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-------TSCEEEEEEEECSSTTCCEEEEEECTTSS
T ss_pred cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC-------CCCEEEeeeEecCCCCCCCCEeEECCCCC
Confidence 333311 2456789999999994 66554 468999999861 01112222232 2356689999999999
Q ss_pred EEEEEec-CCeEEEEecc--cCCce---eeeeecc----CCcc------ceEEEe-ecCc--eEEEecCC-C-----eEE
Q 038568 248 LLFSGGC-DRWIVVWERE--RDHRM---VFAEALW----GHTG------ALLCLI-NVGD--LLASGSAD-R-----TVR 302 (357)
Q Consensus 248 ~l~~~~~-dg~i~vwd~~--~~~~~---~~~~~~~----~~~~------~v~~~~-~~~~--~l~~~~~d-g-----~i~ 302 (357)
+|++++. ++.|.+|+++ +++.. ..+..+. +|.. .+..++ ++++ +|+++..+ + .|.
T Consensus 206 ~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~ 285 (365)
T 1jof_A 206 YLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIA 285 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEE
Confidence 9888775 7899999875 34321 1122222 2222 466777 7766 66665532 2 899
Q ss_pred EeeCC-CCcceeeee-eecCCcCceEEEEEee---CCCCCCCCeEEEEEcCC-CCeEEecC
Q 038568 303 IWQRG-KENCYRCMA-FLEGHEKPVKSLVAIS---SSSSASNGIVSIGSGSL-NGEIKVWD 357 (357)
Q Consensus 303 vw~~~-~~~~~~~~~-~~~~h~~~v~~~~~~~---~~~~~~~~~~~l~s~~~-dg~v~~wd 357 (357)
+|++. +++ ...+. ....+...+..++|+| +++ +|++++. ++.|++|+
T Consensus 286 v~~~~~~g~-~~~~~~~~~~~~~~~~~~a~sp~~~dg~-------~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 286 GFKLRDCGS-IEKQLFLSPTPTSGGHSNAVSPCPWSDE-------WMAITDDQEGWLEIYR 338 (365)
T ss_dssp EEEECTTSC-EEEEEEEEECSSCCTTCCCEEECTTCTT-------EEEEECSSSCEEEEEE
T ss_pred EEEECCCCC-EEEeeeeeecCCCCcccceecCCCcCCC-------EEEEEEcCCCeEEEEE
Confidence 99996 443 22211 2334555677899999 787 7877775 58999985
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=8e-20 Score=167.02 Aligned_cols=270 Identities=10% Similarity=0.027 Sum_probs=172.8
Q ss_pred EEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCC---ceEEEEEecCc--eEEeec---------CCeEEE
Q 038568 34 CLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSG---SVKSITFHITK--IFTAHQ---------DCKIRV 96 (357)
Q Consensus 34 ~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~~--l~~~~~---------d~~i~v 96 (357)
+++|+ |++++++ .| .|++||+ .+++....+.. +.. .+.+++|+||+ |++++. ++.|++
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~-~~g~~~~~~~~---~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~ 94 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNI-ETGQSYTILSN---RTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYI 94 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEES-SSCCEEEEECH---HHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEc-CCCcEEEEEcc---ccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEE
Confidence 67888 6555554 57 9999999 88887766664 433 48999999998 777765 789999
Q ss_pred EecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchh
Q 038568 97 WKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKC 174 (357)
Q Consensus 97 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~ 174 (357)
||+.+++..... .....+..++|+| +.|+.+. ++.|++||+.+++.
T Consensus 95 ~d~~~g~~~~~~-------------------------------~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 95 YDLSNGEFVRGN-------------------------------ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPP 142 (719)
T ss_dssp EETTTTEECCSS-------------------------------CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCC
T ss_pred EECCCCccccce-------------------------------ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCc
Confidence 999887541100 1123577899999 6777775 78999999988776
Q ss_pred hhhccccccccE-----------------EEEEEecCC-eEEEEeCCC--------------------------------
Q 038568 175 LESVNKAHEDAV-----------------NAVVVSDNG-VVYTGSADG-------------------------------- 204 (357)
Q Consensus 175 ~~~~~~~~~~~v-----------------~~~~~~~~~-~l~~~~~d~-------------------------------- 204 (357)
......++...+ .+++|+||| +|++++.|.
T Consensus 143 ~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~ 222 (719)
T 1z68_A 143 FQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNP 222 (719)
T ss_dssp EECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCC
T ss_pred EEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCC
Confidence 543212322222 489999999 577776542
Q ss_pred --eEEEEEccccccccccccc-eeee---eEeeccccceeEEEEecCCCEEEEEecC----CeEEEEe----cccCCcee
Q 038568 205 --RIRVWERSVVDHNKERKSR-HMLV---TTLVKHRSTVNALALNGDGSLLFSGGCD----RWIVVWE----RERDHRMV 270 (357)
Q Consensus 205 --~i~i~d~~~~~~~~~~~~~-~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd----~~~~~~~~ 270 (357)
.|++||+.. .... ...+ ..+..|...+..++|+||++++++.... ..|.+|| +.+++...
T Consensus 223 ~~~l~~~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 223 VVRIFIIDTTY------PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp EEEEEEEESSC------HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred eeEEEEEECCC------CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 788898872 1110 0001 1234577889999999998777764432 2488899 76655322
Q ss_pred eee-eccCCccceE-----EEeecCc--eEE--EecCCC--eEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCC
Q 038568 271 FAE-ALWGHTGALL-----CLINVGD--LLA--SGSADR--TVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSAS 338 (357)
Q Consensus 271 ~~~-~~~~~~~~v~-----~~~~~~~--~l~--~~~~dg--~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 338 (357)
... ...+|...+. .+.|+++ .|+ +...+| .|.+||+.+++ ...+..+...+..+.+. +++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----~~~lt~~~~~v~~~~~~-d~~--- 368 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----AIQITSGKWEAINIFRV-TQD--- 368 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----CEECSCSSSCEEEEEEE-CSS---
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc----eEecccCceEEEEEEEE-eCC---
Confidence 221 0024555554 5566655 333 454555 57777776653 33445556668887777 665
Q ss_pred CCeEEEEEcCC----CCeEEecC
Q 038568 339 NGIVSIGSGSL----NGEIKVWD 357 (357)
Q Consensus 339 ~~~~~l~s~~~----dg~v~~wd 357 (357)
.+++++.. ++..++|.
T Consensus 369 ---~i~~~~~~~~~~~~~~~l~~ 388 (719)
T 1z68_A 369 ---SLFYSSNEFEEYPGRRNIYR 388 (719)
T ss_dssp ---EEEEEESCGGGCTTCBEEEE
T ss_pred ---EEEEEEecCCCCCceEEEEE
Confidence 24445544 47788773
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=1.6e-17 Score=139.18 Aligned_cols=271 Identities=11% Similarity=0.087 Sum_probs=163.6
Q ss_pred ccceeEEEEe--cceEEEeeC----C-ceEEEeccCC--cc--ccceeccccCCCCceEEEEEecCceEEee-cCCeEEE
Q 038568 29 HMIISCLAVH--NSLLYAASL----N-EINVFDLISD--YS--HVDTFSNDLSSSGSVKSITFHITKIFTAH-QDCKIRV 96 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~----d-~i~iw~~~~~--~~--~~~~~~~~~~~~~~v~~l~~~~~~l~~~~-~d~~i~v 96 (357)
......++|+ |++|++++. + .|.+|++ +. ++ .+..... +......+++....|++++ .++.+.+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~-~~~~g~~~~~~~~~~---~~~~p~~~~~dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAF-DKEKGTLHLLNTQKT---MGADPCYLTTNGKNIVTANYSGGSITV 124 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEE-ETTTTEEEEEEEEEC---SSSCEEEEEECSSEEEEEETTTTEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEE-eCCCCcEEEeeEecc---CCCCcEEEEECCCEEEEEECCCCEEEE
Confidence 4556778998 888888886 3 8999998 44 32 2333332 5567778888222255554 6889999
Q ss_pred EecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-cCCeEEEEEcCcch
Q 038568 97 WKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-WDRSFKIWNASNYK 173 (357)
Q Consensus 97 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-~dg~i~iwd~~~~~ 173 (357)
|++........+...... .+........+...+.+++|+| +++++++ .++.|.+|++....
T Consensus 125 ~~~~~~g~~~~~~~~~~~----------------~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEF----------------KGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp EEBCTTSCBCSCSEEEEC----------------CCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTC
T ss_pred EEeCCCCcCcccceeEEc----------------cCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC
Confidence 999754432221110000 0000000012344578899999 5455544 58899999987543
Q ss_pred h------h------hhccccccccEEEEEEecCCe-EEEEe-CCCeEEEEEccccccccccccceeeeeEe---eccccc
Q 038568 174 C------L------ESVNKAHEDAVNAVVVSDNGV-VYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTL---VKHRST 236 (357)
Q Consensus 174 ~------~------~~~~~~~~~~v~~~~~~~~~~-l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~---~~~~~~ 236 (357)
. + .............++|+|++. +++++ .++.|.+||+.. + .......+ ..+...
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~------g--~~~~~~~~~~~~~~~~~ 260 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD------G--MLDEIQTVAADTVNAQG 260 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET------T--EEEEEEEEESCSSCCCC
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC------C--ceEEeEEEecCCCCCCC
Confidence 2 1 111134456678999999994 65555 689999999871 1 11112222 233345
Q ss_pred eeEEEEecCCCEEEEEecC--CeEEEEeccc-CCceeeeeeccCCccceEEEeecCc--eEEEec-CCCeEEEeeCC--C
Q 038568 237 VNALALNGDGSLLFSGGCD--RWIVVWERER-DHRMVFAEALWGHTGALLCLINVGD--LLASGS-ADRTVRIWQRG--K 308 (357)
Q Consensus 237 v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~-~dg~i~vw~~~--~ 308 (357)
...++|+|+|++|+++..+ +.|.+|++.. .........+.. ...+..++|+++ +|++++ .++.|.+|++. +
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~ 339 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQAT 339 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTT
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCC
Confidence 6899999999988776654 8999999962 222223333333 345667777765 666666 67999996554 5
Q ss_pred Ccceeeeeee-cCCcCceEEEEEe
Q 038568 309 ENCYRCMAFL-EGHEKPVKSLVAI 331 (357)
Q Consensus 309 ~~~~~~~~~~-~~h~~~v~~~~~~ 331 (357)
++ ..... ..+...+.|+.|.
T Consensus 340 g~---~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 340 GL---LTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CC---EEECSCCEECSSEEEEEEE
T ss_pred Cc---EeecceeeeCCCCeEEEEc
Confidence 42 22211 2244568888886
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.84 E-value=7.9e-19 Score=160.44 Aligned_cols=278 Identities=9% Similarity=0.011 Sum_probs=172.3
Q ss_pred eeEEEEe--cceEEEeeC---------C-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEE
Q 038568 32 ISCLAVH--NSLLYAASL---------N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVW 97 (357)
Q Consensus 32 i~~~~~s--~~~l~t~~~---------d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vw 97 (357)
|.+++|| |++|+.++. + .|++||+ ++++.+.... ....+..++|+||+ |+.+ .++.|++|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~-~~g~~~~~~~----l~~~~~~~~~SPDG~~la~~-~~~~i~~~ 135 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL-SNGEFVRGNE----LPRPIQYLCWSPVGSKLAYV-YQNNIYLK 135 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET-TTTEECCSSC----CCSSBCCEEECSSTTCEEEE-ETTEEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC-CCCcccccee----cCcccccceECCCCCEEEEE-ECCeEEEE
Confidence 9999999 999998876 7 9999999 7776532122 23468899999998 6665 47899999
Q ss_pred ecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccc---------cEEEEEEec--CeEEEEecCC----
Q 038568 98 KITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWD---------AVSDLVVKQ--GLMYSVSWDR---- 162 (357)
Q Consensus 98 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~~~--~~l~~~~~dg---- 162 (357)
++.+++........ ....++.++.. ...+++|+| +.|++++.|.
T Consensus 136 ~~~~g~~~~l~~~~---------------------~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~ 194 (719)
T 1z68_A 136 QRPGDPPFQITFNG---------------------RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIP 194 (719)
T ss_dssp SSTTSCCEECCCCC---------------------BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSC
T ss_pred eCCCCCcEEEecCC---------------------CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCc
Confidence 99887653321110 00011112222 225789999 7788877552
Q ss_pred ------------------------------eEEEEEcCcchhh--------hhccccccccEEEEEEecCCeEE-EEeC-
Q 038568 163 ------------------------------SFKIWNASNYKCL--------ESVNKAHEDAVNAVVVSDNGVVY-TGSA- 202 (357)
Q Consensus 163 ------------------------------~i~iwd~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~l~-~~~~- 202 (357)
.|++||+.+++.. ..+ ..+...+..++|+||++++ +...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~SpD~~~~~~~~~~ 273 (719)
T 1z68_A 195 VIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMI-ASSDYYFSWLTWVTDERVCLQWLKR 273 (719)
T ss_dssp EEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHH-HTSCEEEEEEEESSSSEEEEEEEES
T ss_pred eEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccC-CCCcceEEEeEEeCCCeEEEEEecc
Confidence 7899999988764 223 3577789999999999644 4222
Q ss_pred -C--CeEEEEE----ccccccccccccceeeeeEe----ecccccee-----EEEEecCCCEEEE--EecCC--eEEEEe
Q 038568 203 -D--GRIRVWE----RSVVDHNKERKSRHMLVTTL----VKHRSTVN-----ALALNGDGSLLFS--GGCDR--WIVVWE 262 (357)
Q Consensus 203 -d--~~i~i~d----~~~~~~~~~~~~~~~~~~~~----~~~~~~v~-----~~~~~~~~~~l~~--~~~dg--~i~vwd 262 (357)
+ ..|.+|| +.. .+..... ..|...+. .+.|+|||+.|+. ...+| .|.+||
T Consensus 274 ~~~~~~l~~~d~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 274 VQNVSVLSICDFREDWQT----------WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIK 343 (719)
T ss_dssp STTEEEEEEEEECSSSSS----------EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEES
T ss_pred ccCeEEEEEEcccCCCCC----------CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEE
Confidence 2 2488888 551 1222222 35666666 7899999996554 44555 577778
Q ss_pred cccCCceeeeeeccCCccceEEEee-cCceEEEecC-----CCeEEEeeCCC--Cc-ceeeeee-ecCCcCceEEEEEee
Q 038568 263 RERDHRMVFAEALWGHTGALLCLIN-VGDLLASGSA-----DRTVRIWQRGK--EN-CYRCMAF-LEGHEKPVKSLVAIS 332 (357)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~-----dg~i~vw~~~~--~~-~~~~~~~-~~~h~~~v~~~~~~~ 332 (357)
+.+++. ..+..+...+..+.+ +++.|+..+. ++..++|.+.. +. ..+++.. +.+|...+..+.|+|
T Consensus 344 ~~~~~~----~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~ 419 (719)
T 1z68_A 344 DTVENA----IQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSD 419 (719)
T ss_dssp SCSTTC----EECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECG
T ss_pred CCCCce----EecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECC
Confidence 776542 233334444544332 4444444443 48889998764 21 1122211 223667788999999
Q ss_pred CCCCCCCCeEEEEEcCCC--CeEEecC
Q 038568 333 SSSSASNGIVSIGSGSLN--GEIKVWD 357 (357)
Q Consensus 333 ~~~~~~~~~~~l~s~~~d--g~v~~wd 357 (357)
+++ .++++++.+ ..+.+||
T Consensus 420 dg~------~l~~~~s~~~~p~~~l~d 440 (719)
T 1z68_A 420 YAK------YYALVCYGPGIPISTLHD 440 (719)
T ss_dssp GGS------SEEEEECCBSSCEEEEEC
T ss_pred CCC------EEEEEcCCCCCCeEEEEE
Confidence 887 233344433 3555654
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.83 E-value=1.8e-18 Score=146.34 Aligned_cols=280 Identities=8% Similarity=0.004 Sum_probs=173.8
Q ss_pred cceecccccCCCCCCCccceeE-----EEEe--cceEEEeeC-C---ceEEEeccCCccccceeccccCCCCceEEEEEe
Q 038568 13 KHHCIASLKIPSPDPHHMIISC-----LAVH--NSLLYAASL-N---EINVFDLISDYSHVDTFSNDLSSSGSVKSITFH 81 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~i~~-----~~~s--~~~l~t~~~-d---~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 81 (357)
++.....+.. |...... .+|+ |++|+.++. + .|.+||+ .+++......+ +...+..+.|+
T Consensus 19 ~g~~~~~lt~-----~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~-~~g~~~~lt~~---~~~~~~~~~~s 89 (388)
T 3pe7_A 19 TGAQVTRLTP-----PDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDL-NTQVATQLTEG---RGDNTFGGFLS 89 (388)
T ss_dssp TCCEEEECSC-----TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEET-TTCEEEECCCS---SCBCSSSCEEC
T ss_pred CCcceEEecC-----CcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeC-CCCceEEeeeC---CCCCccceEEc
Confidence 3455556654 5555554 7888 888888876 4 3888898 77777666654 55555577899
Q ss_pred cCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEE--Eec--CeE
Q 038568 82 ITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV--VKQ--GLM 155 (357)
Q Consensus 82 ~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~--~~l 155 (357)
|++ |+.++.++.|.+||+.+++....... +...+.... +++ ..+
T Consensus 90 pdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~------------------------------~~~~~~~~~~~~~~dg~~l 139 (388)
T 3pe7_A 90 PDDDALFYVKDGRNLMRVDLATLEENVVYQV------------------------------PAEWVGYGTWVANSDCTKL 139 (388)
T ss_dssp TTSSEEEEEETTTEEEEEETTTCCEEEEEEC------------------------------CTTEEEEEEEEECTTSSEE
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcceeeeec------------------------------hhhcccccceeECCCCCee
Confidence 997 88888889999999998765433221 112221121 233 233
Q ss_pred EE----------------------EecCCeEEEEEcCcchhhhhccccccccEEEEEEec-CCe-EEEEeCC------Ce
Q 038568 156 YS----------------------VSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD-NGV-VYTGSAD------GR 205 (357)
Q Consensus 156 ~~----------------------~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~d------~~ 205 (357)
+. ...+..|.+||+.+++.... ..+...+..+.|+| ++. |+....+ ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l--~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (388)
T 3pe7_A 140 VGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI--LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDAR 217 (388)
T ss_dssp EEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE--EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCS
T ss_pred ccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe--ecCCccccccEECCCCCCEEEEEEecCCCCCcce
Confidence 21 23457899999998865433 35566789999999 884 6555543 36
Q ss_pred EEEEEccccccccccccceeeeeEeeccc--cceeEEEEecCCCEEEEEec-CC----eEEEEecccCCceeeeeeccCC
Q 038568 206 IRVWERSVVDHNKERKSRHMLVTTLVKHR--STVNALALNGDGSLLFSGGC-DR----WIVVWERERDHRMVFAEALWGH 278 (357)
Q Consensus 206 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-dg----~i~vwd~~~~~~~~~~~~~~~~ 278 (357)
|.++|... .....+..+. ..+...+|+|||+.|+..+. ++ .|++||+.+++... +....++
T Consensus 218 l~~~d~~~-----------~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~ 285 (388)
T 3pe7_A 218 MWLINEDG-----------TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ-LTSMPAC 285 (388)
T ss_dssp EEEEETTS-----------CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE-EEEECCE
T ss_pred EEEEeCCC-----------CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE-EEcCCCc
Confidence 77777651 1122222233 35778899999997765443 22 39999999876432 2222221
Q ss_pred ccce-----EEEeecCceEEEe---------cCCCeEEEeeCCCCcceeeeeeecCCcC-----------ceEEEEEeeC
Q 038568 279 TGAL-----LCLINVGDLLASG---------SADRTVRIWQRGKENCYRCMAFLEGHEK-----------PVKSLVAISS 333 (357)
Q Consensus 279 ~~~v-----~~~~~~~~~l~~~---------~~dg~i~vw~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~ 333 (357)
.... ..++.+++.|+.. ..+..|++||+.+++. ..+..+.. .+.+++|+||
T Consensus 286 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~spD 361 (388)
T 3pe7_A 286 SHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ----HRVARHDTSWKVFEGDRQVTHPHPSFTPD 361 (388)
T ss_dssp EEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE----EEEEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred eeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce----EEeccccCcccccccccccCCCCccCCCC
Confidence 1100 1344445555532 5567899999998632 23333444 5788999999
Q ss_pred CCCCCCCeEEEE-EcCCCCeEEec
Q 038568 334 SSSASNGIVSIG-SGSLNGEIKVW 356 (357)
Q Consensus 334 ~~~~~~~~~~l~-s~~~dg~v~~w 356 (357)
++ .|+ ++..+|...||
T Consensus 362 g~-------~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 362 DK-------QILFTSDVHGKPALY 378 (388)
T ss_dssp SS-------EEEEEECTTSSCEEE
T ss_pred CC-------EEEEEecCCCceeEE
Confidence 98 555 45567777776
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=7.4e-17 Score=135.18 Aligned_cols=248 Identities=13% Similarity=0.110 Sum_probs=153.5
Q ss_pred ccceeEEEEe--cceEEEeeCCceEEEeccC-CccccceeccccCCCCceEEEEEecCc----eEEee------------
Q 038568 29 HMIISCLAVH--NSLLYAASLNEINVFDLIS-DYSHVDTFSNDLSSSGSVKSITFHITK----IFTAH------------ 89 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~d~i~iw~~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~----l~~~~------------ 89 (357)
...+..++|+ |++|++++.+.|.+|++ + +++........ ..+.+.+++|+|++ ++++.
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~~v~~~~~-~~~g~~~~~~~~~--~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMKKWSSFAV-KSPTEIVHEASHP--IGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBTEEEEEEE-EETTEEEEEEEEE--CCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCcEEEECCCCCEEEEEccceEEEEEE-CCCCCEEEeeEee--cCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 3467889998 88888888779999999 5 66554333210 11235568899986 23443
Q ss_pred -cCCeEEEEecCC-ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec-CCeE
Q 038568 90 -QDCKIRVWKITA-SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW-DRSF 164 (357)
Q Consensus 90 -~d~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg~i 164 (357)
.++.+.+|++.. ++....+.... ..+...+.+++|+| ++++++.. ++.|
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~--------------------------~~~~~~~~~~~~spdG~~l~~~~~~~~~v 169 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYE--------------------------YQENTGIHGMVFDPTETYLYSADLTANKL 169 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEE--------------------------CCTTCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred cCCceEEEEccCCCCcCcceEeeEE--------------------------eCCCCcceEEEECCCCCEEEEEcCCCCEE
Confidence 689999999974 43322222110 02346788999999 56776654 6799
Q ss_pred EEEEcC-cchhh--hhccc-cccccEEEEEEecCC-eEEEEe-CCCeEEEEEccccccccccccc--eeeeeEee----c
Q 038568 165 KIWNAS-NYKCL--ESVNK-AHEDAVNAVVVSDNG-VVYTGS-ADGRIRVWERSVVDHNKERKSR--HMLVTTLV----K 232 (357)
Q Consensus 165 ~iwd~~-~~~~~--~~~~~-~~~~~v~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~----~ 232 (357)
.+||+. +++.. ..+.. .+...+..++|+|++ ++++++ .++.|.+|++.... +... ...+..+. +
T Consensus 170 ~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~----g~~~~~~~~~~~~~~~~~g 245 (365)
T 1jof_A 170 WTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPAT----HMPVYTHHSFPLIPPGIPD 245 (365)
T ss_dssp EEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTT----CCEEEEEEEEESSCTTCCC
T ss_pred EEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCC----CcEEEccceEEcCCCCcCC
Confidence 999998 66532 22211 235678999999999 465655 47899999875100 0000 01111121 1
Q ss_pred ccc------ceeEEE-EecCCCEEEEEecCC------eEEEEecc-cCCceeeeeeccCCccceEEEeec-----CceEE
Q 038568 233 HRS------TVNALA-LNGDGSLLFSGGCDR------WIVVWERE-RDHRMVFAEALWGHTGALLCLINV-----GDLLA 293 (357)
Q Consensus 233 ~~~------~v~~~~-~~~~~~~l~~~~~dg------~i~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~ 293 (357)
+.. .+..++ |+|||++|+++..+. .|.+|++. +++..........+......++++ +++|+
T Consensus 246 ~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~ 325 (365)
T 1jof_A 246 RDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMA 325 (365)
T ss_dssp BCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEE
T ss_pred cccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEE
Confidence 222 578999 999999888776432 89999996 443221111122222223334444 55888
Q ss_pred EecC-CCeEEEeeCCCC
Q 038568 294 SGSA-DRTVRIWQRGKE 309 (357)
Q Consensus 294 ~~~~-dg~i~vw~~~~~ 309 (357)
+++. ++.|.+|++...
T Consensus 326 v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 326 ITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EECSSSCEEEEEEEETT
T ss_pred EEEcCCCeEEEEEEchh
Confidence 8776 489999999765
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=4.2e-16 Score=126.10 Aligned_cols=236 Identities=11% Similarity=0.139 Sum_probs=157.5
Q ss_pred CCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
+-..+.++++++++ +++...++.|.+||.. ++....+.... ...++...+..+
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~------------------------~~~~~~~~p~~i 82 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECG------------------------KRDSQLLYPNRV 82 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBS------------------------SSTTCBSSEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccC------------------------CCcccccCceEE
Confidence 56678999999987 5555778999999987 43322221100 001345678899
Q ss_pred EEe-c-CeEEEEec--CCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccc
Q 038568 149 VVK-Q-GLMYSVSW--DRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSR 223 (357)
Q Consensus 149 ~~~-~-~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~ 223 (357)
++. + ..++.+.. ++.|.+|| .+++.+..+...+...+..+++++++. +++...++.|.+||..
T Consensus 83 ~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----------- 150 (286)
T 1q7f_A 83 AVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN----------- 150 (286)
T ss_dssp EEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-----------
T ss_pred EEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-----------
Confidence 994 4 55555553 88999999 556666555333446789999999996 5555668899999964
Q ss_pred eeeeeEee--ccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCC
Q 038568 224 HMLVTTLV--KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADR 299 (357)
Q Consensus 224 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg 299 (357)
......+. .+...+..++++|+++++++...++.|++||... +....+ ...++......++++++ ++++...++
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~-~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQI-GGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEE-SCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEE-ccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 12222332 3445689999999999888878899999999853 322111 11222345677777665 666666665
Q ss_pred -eEEEeeCCCCcceeeeeeecCC--cCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 300 -TVRIWQRGKENCYRCMAFLEGH--EKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 300 -~i~vw~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.|.+|+.. + +.+..+..+ ...+.+++++|++. ++++ +.|+.|++|+
T Consensus 229 ~~i~~~~~~-g---~~~~~~~~~~~~~~~~~i~~~~~g~-------l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 229 FNLTIFTQD-G---QLISALESKVKHAQCFDVALMDDGS-------VVLA-SKDYRLYIYR 277 (286)
T ss_dssp CEEEEECTT-S---CEEEEEEESSCCSCEEEEEEETTTE-------EEEE-ETTTEEEEEE
T ss_pred EEEEEECCC-C---CEEEEEcccCCCCcceeEEECCCCc-------EEEE-CCCCeEEEEE
Confidence 99999964 3 223333333 23478999999986 7777 5699999995
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.78 E-value=8.3e-17 Score=134.00 Aligned_cols=237 Identities=10% Similarity=0.068 Sum_probs=153.0
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEE-EeeCC-ceEEEeccCCccccceeccccCC-----CCceEEEEEec
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLY-AASLN-EINVFDLISDYSHVDTFSNDLSS-----SGSVKSITFHI 82 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~-t~~~d-~i~iw~~~~~~~~~~~~~~~~~~-----~~~v~~l~~~~ 82 (357)
.+++.++.+.. + ....+..++|+ +++++ ++..+ .|.+||+ .+++.+..+... + ...+..++|+|
T Consensus 29 ~~~~~~~~~~~--~--~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~-~t~~~~~~~~~~--~~~~~~~~~~~~~~~sp 101 (349)
T 1jmx_B 29 ASDTVYKSCVM--P--DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL-DTCKNTFHANLS--SVPGEVGRSMYSFAISP 101 (349)
T ss_dssp TTTEEEEEEEC--S--SCCSSCEEEECTTSSEEEEEETTTTEEEEEET-TTTEEEEEEESC--CSTTEEEECSSCEEECT
T ss_pred CCCcEEEEEec--C--CCCCCceeEECCCCCEEEEEeCCCCcEEEEeC-CCCcEEEEEEcc--cccccccccccceEECC
Confidence 34566666653 1 11257889998 66555 44466 9999999 888777766530 2 23378899999
Q ss_pred Cc--eEEeecC------------CeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 83 TK--IFTAHQD------------CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 83 ~~--l~~~~~d------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
++ |++++.+ +.|.+||+.+++....+... .+...+.++
T Consensus 102 dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----------------------------~~~~~~~~~ 153 (349)
T 1jmx_B 102 DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF----------------------------PMPRQVYLM 153 (349)
T ss_dssp TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE----------------------------ECCSSCCCE
T ss_pred CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec----------------------------cCCCcccce
Confidence 87 7777755 89999999876543333221 223457888
Q ss_pred EEec-CeEEEEecCCeEEEEEcCcchhhhhccccccc-----------------------cEEEEEEecCCe--------
Q 038568 149 VVKQ-GLMYSVSWDRSFKIWNASNYKCLESVNKAHED-----------------------AVNAVVVSDNGV-------- 196 (357)
Q Consensus 149 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-----------------------~v~~~~~~~~~~-------- 196 (357)
+|+| ..+++++ +.|.+||+.+++.+..+...... ....+++++++.
T Consensus 154 ~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 231 (349)
T 1jmx_B 154 RAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 231 (349)
T ss_dssp EECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred eECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccc
Confidence 9999 3366654 34999999988776655211100 234455554431
Q ss_pred ----EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec-CCCEEEEEecCCeEEEEecccCCceee
Q 038568 197 ----VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG-DGSLLFSGGCDRWIVVWERERDHRMVF 271 (357)
Q Consensus 197 ----l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~ 271 (357)
+.....++.+++|++. .+...+..++|+| ++++++++ ++.|.+||+.+++....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~ 290 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFA-------------------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA 290 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEE-------------------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE
T ss_pred ceeEEEEeccCCcEEecccc-------------------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE
Confidence 1122233444444432 2455688999999 99999888 88999999998764333
Q ss_pred eeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCc
Q 038568 272 AEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 272 ~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~ 310 (357)
+. ....+.+++++++ +|++++.++.|++||+.+++
T Consensus 291 ~~----~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 291 AN----LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EE----CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred Ec----CCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 22 1223456777655 77778889999999999873
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=7.2e-16 Score=127.19 Aligned_cols=236 Identities=11% Similarity=0.055 Sum_probs=161.0
Q ss_pred CCCceEEEEEecCc--eEEeecC------------------------CeEEEEecCCccceeeeeecCccccceeeeecC
Q 038568 71 SSGSVKSITFHITK--IFTAHQD------------------------CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLP 124 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d------------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (357)
.-+.+.+++++|++ +++...+ ++|.+||..+++......
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--------------- 86 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--------------- 86 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC---------------
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC---------------
Confidence 45679999999987 4444445 357778776665432221
Q ss_pred CCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcch-hhhhcc--------ccccccEEEEEEec
Q 038568 125 NNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYK-CLESVN--------KAHEDAVNAVVVSD 193 (357)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~ 193 (357)
..+......+++++ +++++...++.|++||..... .+..+. ..+-.....++++|
T Consensus 87 --------------~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~ 152 (329)
T 3fvz_A 87 --------------KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEP 152 (329)
T ss_dssp --------------TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECT
T ss_pred --------------CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeC
Confidence 13445678999998 667777778999999985432 344331 12334688999999
Q ss_pred -CCe-EEEEe-CCCeEEEEEccccccccccccceeeeeEee----------ccccceeEEEEecC-CCEEEEEecCCeEE
Q 038568 194 -NGV-VYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTLV----------KHRSTVNALALNGD-GSLLFSGGCDRWIV 259 (357)
Q Consensus 194 -~~~-l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~-~~~l~~~~~dg~i~ 259 (357)
++. +++.+ .++.|++||.. ...+..+. .+-.....++++|+ ++++++...++.|+
T Consensus 153 ~~g~lyv~d~~~~~~I~~~~~~-----------g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 153 STGAVFVSDGYCNSRIVQFSPS-----------GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp TTCCEEEEECSSCCEEEEECTT-----------SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCeEEEEeCCCCCeEEEEcCC-----------CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 776 44444 58999999954 22222222 12234789999998 77777777899999
Q ss_pred EEecccCCceeeeeeccCCccceEEEeecCceEE-E-------ecCCCeEEEeeCCCCcceeeeeee---cCCcCceEEE
Q 038568 260 VWERERDHRMVFAEALWGHTGALLCLINVGDLLA-S-------GSADRTVRIWQRGKENCYRCMAFL---EGHEKPVKSL 328 (357)
Q Consensus 260 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~-~-------~~~dg~i~vw~~~~~~~~~~~~~~---~~h~~~v~~~ 328 (357)
+||..+++....+. ...+...+..+++.|..++ + ...+..|++|+..+++ .+..+ .++...+.+|
T Consensus 222 ~~~~~~G~~~~~~~-~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~---~~~~~~~~~~~~~~p~~i 297 (329)
T 3fvz_A 222 CFKTDTKEFVREIK-HASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE---IIDVFKPVRKHFDMPHDI 297 (329)
T ss_dssp EEETTTCCEEEEEC-CTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC---EEEEECCSSSCCSSEEEE
T ss_pred EEECCCCcEEEEEe-ccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe---EEEEEcCCCCccCCeeEE
Confidence 99998776443322 2345556777777775322 2 2334589999999874 44444 4677789999
Q ss_pred EEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 329 VAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 329 ~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+++|++. ++++...++.|++|+
T Consensus 298 a~~~dG~-------lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 298 VASEDGT-------VYIGDAHTNTVWKFT 319 (329)
T ss_dssp EECTTSE-------EEEEESSSCCEEEEE
T ss_pred EECCCCC-------EEEEECCCCEEEEEe
Confidence 9999987 889999999999985
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=2.8e-16 Score=142.34 Aligned_cols=277 Identities=8% Similarity=-0.020 Sum_probs=171.0
Q ss_pred CccceeEEEEecce--EEEe--eCC-ceEEEeccCCccccceeccccCCCCceE---------EEEEe--cCc-e-EEee
Q 038568 28 HHMIISCLAVHNSL--LYAA--SLN-EINVFDLISDYSHVDTFSNDLSSSGSVK---------SITFH--ITK-I-FTAH 89 (357)
Q Consensus 28 h~~~i~~~~~s~~~--l~t~--~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~---------~l~~~--~~~-l-~~~~ 89 (357)
|...|..++++++. +++. +.+ ...||.. ..+.....+.. +...+. ...|+ ||+ . +..+
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRR-RADGAEESALP---APWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEE-CTTSCEEESSC---TTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEE-CCCCCcceeCC---CCccccccccccCCccceeeeecCCCeEEEEE
Confidence 88999999999443 3333 336 8999986 44444555554 555555 56666 775 3 4444
Q ss_pred c--CCeEEEEecC--C-ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC-
Q 038568 90 Q--DCKIRVWKIT--A-SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD- 161 (357)
Q Consensus 90 ~--d~~i~vwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d- 161 (357)
. +..|.+|++. + ++ ...+...+. ..|...+.+++|+| +.|+.++.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~-------------------------~~~~~~~~~~~~spDg~~l~~~~~~~ 151 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSA-------------------------VGGGLRWADPVLLPERGEVWCMAEEF 151 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCC-------------------------STTCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCcc-------------------------CCCCccccCcEECCCCCEEEEEEecc
Confidence 4 4456666654 2 32 222221100 01567788999999 788888876
Q ss_pred ---------CeEEEEEcCc------chhhhhccc-cccccEEEEEEecCC-eEEEEeCC--------CeEEEEEcccccc
Q 038568 162 ---------RSFKIWNASN------YKCLESVNK-AHEDAVNAVVVSDNG-VVYTGSAD--------GRIRVWERSVVDH 216 (357)
Q Consensus 162 ---------g~i~iwd~~~------~~~~~~~~~-~~~~~v~~~~~~~~~-~l~~~~~d--------~~i~i~d~~~~~~ 216 (357)
..|.+||+.+ ++ ...+ . .+...+..++|+||| +|+.++.+ ..|++||+.
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l-~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~---- 225 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAADRSA-VREL-SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVT---- 225 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTCGGG-SEES-SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEEC----
T ss_pred cCCCCCCceeEEEEEECCCCccccCCc-eeEE-EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEEC----
Confidence 5899999987 44 3444 3 455678889999999 47666644 379999986
Q ss_pred ccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCC--eEEEEecccCCceeeeeeccCCccc--------eEEEe
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR--WIVVWERERDHRMVFAEALWGHTGA--------LLCLI 286 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~--------v~~~~ 286 (357)
..............+...+..++|+|||++++++..++ .|.+||+.+++... ....+... +..++
T Consensus 226 --~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~---l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 226 --EDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ---LCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp --TTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE---SSCCSSBSSCCCCSTTCCSEE
T ss_pred --CCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee---cccccccccCccccccCceEe
Confidence 10000123333344567899999999999888888888 67777765554221 11122111 34556
Q ss_pred ecC--ceEEEecCCCeEEEe--eCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 287 NVG--DLLASGSADRTVRIW--QRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 287 ~~~--~~l~~~~~dg~i~vw--~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
+++ .+++++.. +.++|| |+.++ + +..+..|...+..+. ++++. ..++++++.+....+|
T Consensus 301 ~~~~~~~~~~~~~-~~~~l~~~d~~~~---~-~~~l~~~~~~~~~~~-s~~~~-----~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 301 PLANGLIAVVHGK-GAAVLGILDPESG---E-LVDAAGPWTEWAATL-TVSGT-----RAVGVAASPRTAYEVV 363 (662)
T ss_dssp ECTTSCEEEEEBS-SSCEEEEEETTTT---E-EEECCSSCCEEEEEE-EEETT-----EEEEEEEETTEEEEEE
T ss_pred EeCCCEEEEEEEc-CccEEEEEECCCC---c-EEEecCCCCeEEEEE-ecCCC-----EEEEEEcCCCCCCEEE
Confidence 654 38888888 999999 54443 2 456677777787761 44432 1245555566555544
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=5.3e-15 Score=119.56 Aligned_cols=235 Identities=13% Similarity=0.149 Sum_probs=157.0
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccc---cCCCCceEEEEEe-cCc-eEEeec--CCeEEEE
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSND---LSSSGSVKSITFH-ITK-IFTAHQ--DCKIRVW 97 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~---~~~~~~v~~l~~~-~~~-l~~~~~--d~~i~vw 97 (357)
+-..+.+++++ ++++++...+ .|.+||. + ++.+..+... ..+...+..+++. +++ |+.+.. ++.|.+|
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~-~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDK-E-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECT-T-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECC-C-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 55779999998 7777777777 9999998 5 4555555321 1244678999995 565 555543 7899999
Q ss_pred ecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhh
Q 038568 98 KITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCL 175 (357)
Q Consensus 98 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~ 175 (357)
|. +++....+.. .+...+.++++.+ +++++...++.|.+||.. ++.+
T Consensus 106 d~-~g~~~~~~~~-----------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 154 (286)
T 1q7f_A 106 NQ-YGQFVRKFGA-----------------------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVL 154 (286)
T ss_dssp CT-TSCEEEEECT-----------------------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CC-CCcEEEEecC-----------------------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEE
Confidence 94 4443322211 2335678999998 556666678899999964 4444
Q ss_pred hhccc-cccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeecc--ccceeEEEEecCCCEEEE
Q 038568 176 ESVNK-AHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKH--RSTVNALALNGDGSLLFS 251 (357)
Q Consensus 176 ~~~~~-~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~ 251 (357)
..+.. .+...+..+++++++. +++...++.|++||.. ...+..+..+ ...+..++++++|+++++
T Consensus 155 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-----------g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~ 223 (286)
T 1q7f_A 155 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-----------GQYLRQIGGEGITNYPIGVGINSNGEILIA 223 (286)
T ss_dssp EEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-----------CCEEEEESCTTTSCSEEEEEECTTCCEEEE
T ss_pred EEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-----------CCEEEEEccCCccCCCcEEEECCCCCEEEE
Confidence 44411 3345689999999996 5555678999999975 1223333322 356889999999998888
Q ss_pred EecCC-eEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 252 GGCDR-WIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 252 ~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
...++ .|.+||.. ++.+..+.. ......+.+++++++ ++++ +.|+.|++|++...
T Consensus 224 ~~~~~~~i~~~~~~-g~~~~~~~~-~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 224 DNHNNFNLTIFTQD-GQLISALES-KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ECSSSCEEEEECTT-SCEEEEEEE-SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred eCCCCEEEEEECCC-CCEEEEEcc-cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 87776 99999965 443322222 112223566777665 5555 67999999998653
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.76 E-value=8e-16 Score=128.33 Aligned_cols=257 Identities=11% Similarity=0.055 Sum_probs=167.8
Q ss_pred CC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee----------cCCeEEEEecCCccceeeeeecCc
Q 038568 47 LN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH----------QDCKIRVWKITASRQHQLVSTLPT 113 (357)
Q Consensus 47 ~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~ 113 (357)
.| .|.+||. .+++.+..+.. +..+ .++|+|++ ++++. .++.|.+||..+.+....+...+.
T Consensus 29 ~d~~v~v~D~-~t~~~~~~i~~---g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 29 TESRVHVYDY-TNGKFLGMVPT---AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGCEEEEEET-TTCCEEEEEEC---CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred ccCeEEEEEC-CCCeEEEEecC---CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 36 8999999 88888888775 5555 89999997 66654 367899999988776555543210
Q ss_pred cccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec--CCeEEEEEcCcchhhhh-ccccccccEEE
Q 038568 114 VKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW--DRSFKIWNASNYKCLES-VNKAHEDAVNA 188 (357)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~v~~ 188 (357)
. ..+......++++| ++|+++.. ++.|.+||+.+++.+.. + . ... ...
T Consensus 103 ~------------------------~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i-~-~~~-~~~ 155 (361)
T 2oiz_A 103 R------------------------VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVT-A-AAG-CWS 155 (361)
T ss_dssp B------------------------CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEG-G-GTT-EEE
T ss_pred c------------------------cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEe-c-CCC-cce
Confidence 0 01223456788988 77877764 58999999999988776 5 2 222 223
Q ss_pred EEEecCC--eEEEEeCCCeEEEEEccccccccccccceeee---eEeeccccceeEEEEecCCCEEEEEecCCeEEEEec
Q 038568 189 VVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLV---TTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWER 263 (357)
Q Consensus 189 ~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 263 (357)
+.+.|++ .+++.+.||.+.+|++... +. ..... ..+.....++ .+.+++++..++..+.++.|.++|+
T Consensus 156 v~~~p~~~~~~~~~~~dg~~~~v~~~~~-----g~-~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~ 228 (361)
T 2oiz_A 156 VIPQPNRPRSFMTICGDGGLLTINLGED-----GK-VASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADF 228 (361)
T ss_dssp EEECTTSSSEEEEEETTSSEEEEEECTT-----SS-EEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEEC
T ss_pred eEEcCCCCeeEEEECCCCcEEEEEECCC-----Cc-EeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEe
Confidence 5567766 5888899999999987511 00 00000 1112222222 3445677877777888999999999
Q ss_pred ccCCceeeeeecc------------CCccceEEEeecCceEEEecC-----------CCeEEEeeCCCCcceeeeeeecC
Q 038568 264 ERDHRMVFAEALW------------GHTGALLCLINVGDLLASGSA-----------DRTVRIWQRGKENCYRCMAFLEG 320 (357)
Q Consensus 264 ~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~l~~~~~-----------dg~i~vw~~~~~~~~~~~~~~~~ 320 (357)
...... ....+. ........+..+++.++++.. .+.|.+||+.+. +.+..+..
T Consensus 229 ~~~~~~-~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---~~v~~i~~ 304 (361)
T 2oiz_A 229 SGDEVK-VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---QRVARIPG 304 (361)
T ss_dssp SSSSCE-EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---EEEEEEEC
T ss_pred cCCCce-ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---cEEEEEec
Confidence 754321 111110 001111334444444444322 358999999987 66777777
Q ss_pred CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 321 HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 321 h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+. +.+++|+|+++ +|++++. +.|.+||
T Consensus 305 ~~--p~~ia~spdg~-------~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 305 RD--ALSMTIDQQRN-------LMLTLDG-GNVNVYD 331 (361)
T ss_dssp TT--CCEEEEETTTT-------EEEEECS-SCEEEEE
T ss_pred CC--eeEEEECCCCC-------EEEEeCC-CeEEEEE
Confidence 76 89999999998 8888776 9999997
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=3.7e-17 Score=138.63 Aligned_cols=299 Identities=9% Similarity=-0.025 Sum_probs=168.0
Q ss_pred ccceecccccCCCCCCCccceeEEEEe--cceEEEeeC---C-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-
Q 038568 12 FKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASL---N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK- 84 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~---d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~- 84 (357)
.+++.++.+.......|...+.+++|+ |++|+.... + .|.+||+ .+++....... +......+.|+|++
T Consensus 18 ~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~-~~~~~~~l~~~---~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 18 DTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNL-ETQQAVQLTEG---KGDNTFGGFISTDER 93 (396)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEET-TTTEEEECCCS---SCBCTTTCEECTTSS
T ss_pred CCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEEC-CCCcEEEeecC---CCCccccceECCCCC
Confidence 344445555431111123347888998 888776642 3 7888898 77665443332 22223347899987
Q ss_pred -eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCC-eEEEecccccccccccccEEEEEEec--CeEEEE--
Q 038568 85 -IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNN-YVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSV-- 158 (357)
Q Consensus 85 -l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~-- 158 (357)
|+.++.++.|.+||+.+++.......... ..+.+ .+....... .. . .......++| +.++..
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~--------~~~~g~~l~~~~~~~-~~-~--~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEE--------WKGYGTWVANSDCTK-LV-G--IEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTT--------EEEEEEEEECTTSSE-EE-E--EEEEGGGCCCCCSHHHHHHH
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccc--------cCCCCCEEEeccCCc-cc-c--ccccccccCCCCcceeeeee
Confidence 88888888999999988764332221110 00000 000000000 00 0 0000123344 333332
Q ss_pred ---ecCCeEEEEEcCcchhhhhccccccccEEEEEEec-CC-eEEEEeCC------CeEEEEEccccccccccccceeee
Q 038568 159 ---SWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD-NG-VVYTGSAD------GRIRVWERSVVDHNKERKSRHMLV 227 (357)
Q Consensus 159 ---~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~ 227 (357)
..+..|.+||+.+++..... .+...+..+.|+| ++ +|+..+.+ ..|.+||+. . .. .
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~--~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~------~----~~-~ 228 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIH--QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED------G----SN-V 228 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEE--EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT------S----CC-C
T ss_pred ccCCCcceEEEEECCCCcEEeec--cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECC------C----Cc-e
Confidence 35668999999887654433 4567789999999 66 45555443 357788875 1 11 1
Q ss_pred eEeecc--ccceeEEEEecCCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeec---CceEEEec-
Q 038568 228 TTLVKH--RSTVNALALNGDGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINV---GDLLASGS- 296 (357)
Q Consensus 228 ~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~- 296 (357)
..+..+ ...+..++|+|+|++|+.++.+ +.|++||+.+++... +....++ . ..|+ +++++.++
T Consensus 229 ~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~----~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 229 RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMPPC----S-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECCSE----E-EEEECSSSSEEEEEEC
T ss_pred eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCCCC----C-CCccCCCCceEEEecC
Confidence 112222 2357889999999987776554 459999998775432 2222221 1 4454 44666543
Q ss_pred ---------------CCCeEEEeeCCCCcceeeeeeecCCcC-----------ceEEEEEeeCCCCCCCCeEEEEEcC-C
Q 038568 297 ---------------ADRTVRIWQRGKENCYRCMAFLEGHEK-----------PVKSLVAISSSSSASNGIVSIGSGS-L 349 (357)
Q Consensus 297 ---------------~dg~i~vw~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~~~~~~~l~s~~-~ 349 (357)
.++.|++||+.+++. ..+..+.. .+..+.|+|+++ .|+.++ .
T Consensus 303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~l~~~s~~ 371 (396)
T 3c5m_A 303 DAPVDVADADSYNIENDPFLYVLNTKAKSA----QKLCKHSTSWDVLDGDRQITHPHPSFTPNDD-------GVLFTSDF 371 (396)
T ss_dssp CC----------CCCCCCEEEEEETTTTBC----CEEEECCCCCCCBTTBSSTTCCCCEECTTSS-------EEEEEECT
T ss_pred CcceeeccccccccCCCCcEEEEecccCce----EEccCCCCccccccccccCCCCCceEccCCC-------eEEEEecC
Confidence 347899999987642 22333333 256788999987 555444 4
Q ss_pred CCeEEec
Q 038568 350 NGEIKVW 356 (357)
Q Consensus 350 dg~v~~w 356 (357)
++...+|
T Consensus 372 ~~~~~l~ 378 (396)
T 3c5m_A 372 EGVPAIY 378 (396)
T ss_dssp TSSCEEE
T ss_pred CCCceEE
Confidence 5665555
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=1.8e-15 Score=125.20 Aligned_cols=254 Identities=10% Similarity=0.043 Sum_probs=162.3
Q ss_pred ccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-e-EEeecCCeEEEEecCCcc
Q 038568 29 HMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-I-FTAHQDCKIRVWKITASR 103 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l-~~~~~d~~i~vwd~~~~~ 103 (357)
...|.+++|+ +..++..+.+ .++.|.. +....+.. +...+.+++|++++ | +++..++.|.+||..+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTITA----EPWLEISK---KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEEC----EEEEEEES---SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred ccccceeeecCCccceeEEeecccCccccc----ceeEEEec---cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc
Confidence 3457888888 5566666777 9999943 34555555 66778999999987 4 467788999999998765
Q ss_pred ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC----CeEEEEEcCcchhhhh
Q 038568 104 QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD----RSFKIWNASNYKCLES 177 (357)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d----g~i~iwd~~~~~~~~~ 177 (357)
...... .+...+.++++++ +++++...+ +.|.+||..+++....
T Consensus 78 ~~~~~~------------------------------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 78 IKRPFV------------------------------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp EEEEEE------------------------------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred EEEEee------------------------------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 432221 2345789999998 445555445 5899999887664322
Q ss_pred cc-ccccccEEEEEEecCCeEEEEeCC-------CeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEE
Q 038568 178 VN-KAHEDAVNAVVVSDNGVVYTGSAD-------GRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLL 249 (357)
Q Consensus 178 ~~-~~~~~~v~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 249 (357)
+. ......+..++++|++.++.+... +.|..+|.. . .+. ..+......+..++|+|+++.|
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~------~----~~~-~~~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD------F----RTV-TPIIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT------S----CCE-EEEEEEESSEEEEEECTTSSEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC------C----CEE-EEeecCCCcccceEECCCCCEE
Confidence 21 124457899999999975555442 455555543 1 111 1122223457889999999866
Q ss_pred EE-EecCCeEEEEeccc-CCceeee-----eeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecC
Q 038568 250 FS-GGCDRWIVVWERER-DHRMVFA-----EALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEG 320 (357)
Q Consensus 250 ~~-~~~dg~i~vwd~~~-~~~~~~~-----~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 320 (357)
+. .+.++.|.+||+.+ +...... ..+.++ ..+..++++++ ++++...++.|.+||.. + +.+..+..
T Consensus 197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g---~~~~~~~~ 271 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G---YPIGQILI 271 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-S---CEEEEEEC
T ss_pred EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-C---CEEEEEEc
Confidence 54 45678999999964 3222111 112222 34566777655 66666667899999984 4 22333333
Q ss_pred Cc------CceEEEEEeeCCC
Q 038568 321 HE------KPVKSLVAISSSS 335 (357)
Q Consensus 321 h~------~~v~~~~~~~~~~ 335 (357)
+. ..+.+++|+|++.
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSC
T ss_pred CCCccccccCcceEEECCCCC
Confidence 32 2689999998875
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.74 E-value=3.5e-15 Score=123.09 Aligned_cols=245 Identities=11% Similarity=0.068 Sum_probs=164.7
Q ss_pred ccceeEEEEe--cceEEEeeCC-------------------------ceEEEeccCCccccceeccccCCCCceEEEEEe
Q 038568 29 HMIISCLAVH--NSLLYAASLN-------------------------EINVFDLISDYSHVDTFSNDLSSSGSVKSITFH 81 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~d-------------------------~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 81 (357)
-+.+.+++++ |+++++...+ .|.+||. .+++.+..+.. .+-.....++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~-~~g~~~~~~~~--~~~~~p~gia~d 99 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDP-NNAEILQSSGK--NLFYLPHGLSID 99 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECT-TTCCEEEEECT--TTCSSEEEEEEC
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEEC-CCCeEEeccCC--CccCCceEEEEC
Confidence 3579999999 8888777665 3899998 77777665542 255678999999
Q ss_pred cCc--eEEeecCCeEEEEecCCcc-ceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeE
Q 038568 82 ITK--IFTAHQDCKIRVWKITASR-QHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLM 155 (357)
Q Consensus 82 ~~~--l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l 155 (357)
|++ +++...++.|++|+..... ....+...... ..-..+......++++| .++
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~---------------------g~~~~~~~~P~~ia~~~~~g~ly 158 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQP---------------------GSDQNHFCQPTDVAVEPSTGAVF 158 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBC---------------------CCSTTCCSSEEEEEECTTTCCEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCC---------------------CCCccccCCCcEEEEeCCCCeEE
Confidence 987 6666778999999986542 22222110000 00013445688999997 455
Q ss_pred EEEe-cCCeEEEEEcCcchhhhhccc---------cccccEEEEEEecC-Ce-EEEEeCCCeEEEEEccccccccccccc
Q 038568 156 YSVS-WDRSFKIWNASNYKCLESVNK---------AHEDAVNAVVVSDN-GV-VYTGSADGRIRVWERSVVDHNKERKSR 223 (357)
Q Consensus 156 ~~~~-~dg~i~iwd~~~~~~~~~~~~---------~~~~~v~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~ 223 (357)
++.+ .++.|++|| .+++.+..+.. .+-.....++++|+ +. +++...++.|++||.. .
T Consensus 159 v~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~----------~ 227 (329)
T 3fvz_A 159 VSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD----------T 227 (329)
T ss_dssp EEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT----------T
T ss_pred EEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC----------C
Confidence 5554 589999999 45666655521 12234789999998 65 6666778999999986 2
Q ss_pred eeeeeEe--eccccceeEEEEec------CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEE
Q 038568 224 HMLVTTL--VKHRSTVNALALNG------DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLA 293 (357)
Q Consensus 224 ~~~~~~~--~~~~~~v~~~~~~~------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~ 293 (357)
.+.+..+ ..+...+..++|+| +++..++...+..|++||..+++....+....++......++++++ +++
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyv 307 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYI 307 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEE
T ss_pred CcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEE
Confidence 3334444 24556788899998 3333333344568999999988755443322456666778888776 777
Q ss_pred EecCCCeEEEeeCCC
Q 038568 294 SGSADRTVRIWQRGK 308 (357)
Q Consensus 294 ~~~~dg~i~vw~~~~ 308 (357)
+...++.|++|++..
T Consensus 308 ad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 308 GDAHTNTVWKFTLTE 322 (329)
T ss_dssp EESSSCCEEEEEEEE
T ss_pred EECCCCEEEEEeCCc
Confidence 888899999999864
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=7.1e-16 Score=141.12 Aligned_cols=254 Identities=12% Similarity=0.061 Sum_probs=156.8
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCC-----ceEEEEEecCc--eEEeecC------
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSG-----SVKSITFHITK--IFTAHQD------ 91 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~--l~~~~~d------ 91 (357)
......+++|+ |++++++ | .|++||+ .+++....+.+ |.. ....++|+||+ |+.++.+
T Consensus 15 ~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 15 YRLKLYSLRWISDHEYLYKQ--ENNILVFNA-EYGNSSVFLEN---STFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp SCCCCCCEEECSSSEEEEEE--TTEEEEEET-TTCCEEEEECT---TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccccccccEECCCCcEEEEc--CCcEEEEEC-CCCceEEEEec---hhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 33446788999 7788876 7 9999999 88887766665 432 23458899998 7777765
Q ss_pred ---CeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEE
Q 038568 92 ---CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKI 166 (357)
Q Consensus 92 ---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i 166 (357)
+.+.+||+.+++... + ..+...+...+|+| +.|+.+ .++.|++
T Consensus 89 ~~~~~~~~~d~~~~~~~~-l------------------------------~~~~~~~~~~~~SPdG~~la~~-~~~~i~~ 136 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQLIT-E------------------------------ERIPNNTQWVTWSPVGHKLAYV-WNNDIYV 136 (740)
T ss_dssp CEEEEEEEEETTTTEECC-S------------------------------SCCCTTEEEEEECSSTTCEEEE-ETTEEEE
T ss_pred ccceEEEEEECCCCcEEE-c------------------------------ccCCCcceeeEECCCCCEEEEE-ECCeEEE
Confidence 567799999876432 1 15567899999999 677776 5789999
Q ss_pred EEcCcchhhhhccccccccE-----------------EEEEEecCCe-EEEEeCCC------------------------
Q 038568 167 WNASNYKCLESVNKAHEDAV-----------------NAVVVSDNGV-VYTGSADG------------------------ 204 (357)
Q Consensus 167 wd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~-l~~~~~d~------------------------ 204 (357)
||+.+++.......++...+ ..+.|+|||. |+.++.|.
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 99988765432212222222 3589999994 76664332
Q ss_pred ------------eEEEEEccccccccccccceeeeeEee------ccccceeEEEEecCCCEEEEEec----CCeEEEEe
Q 038568 205 ------------RIRVWERSVVDHNKERKSRHMLVTTLV------KHRSTVNALALNGDGSLLFSGGC----DRWIVVWE 262 (357)
Q Consensus 205 ------------~i~i~d~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd 262 (357)
.|++||+..... +.. .. ...+. ++...+..++|+|||+.++.... +..|++||
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~---~~~-~~-~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d 291 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSS---VTN-AT-SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICD 291 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCS---SSC-CC-EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEE
T ss_pred cCCCCcCcCCeeEEEEEECCCCCC---CCc-ce-EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEE
Confidence 355555541000 100 01 11222 36777899999999996665533 34799999
Q ss_pred cccCC----ceeeeeec--cCCccceE-----EEeecCc--eEE-Eec-CC--CeEEEeeCCCCcceeeeeeecCCcCce
Q 038568 263 RERDH----RMVFAEAL--WGHTGALL-----CLINVGD--LLA-SGS-AD--RTVRIWQRGKENCYRCMAFLEGHEKPV 325 (357)
Q Consensus 263 ~~~~~----~~~~~~~~--~~~~~~v~-----~~~~~~~--~l~-~~~-~d--g~i~vw~~~~~~~~~~~~~~~~h~~~v 325 (357)
+.+++ .... ..+ .+|...+. ...|+++ .|+ ..+ .+ ..|++||+..++ ...+......|
T Consensus 292 ~~tg~~~~~~~~~-~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~----~~~lT~g~~~v 366 (740)
T 4a5s_A 292 YDESSGRWNCLVA-RQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD----CTFITKGTWEV 366 (740)
T ss_dssp EETTTTEEEECGG-GCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS----CEESCCSSSCE
T ss_pred CCCCccccceeEE-EEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc----eEecccCCEEE
Confidence 99876 1111 111 23443332 4556655 444 444 33 468888887653 22233334455
Q ss_pred EEEE
Q 038568 326 KSLV 329 (357)
Q Consensus 326 ~~~~ 329 (357)
..+.
T Consensus 367 ~~~~ 370 (740)
T 4a5s_A 367 IGIE 370 (740)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=6e-15 Score=123.07 Aligned_cols=268 Identities=9% Similarity=0.037 Sum_probs=171.4
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEee----------CC-ceEEEeccCCccccceeccccC---CCCc
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAAS----------LN-EINVFDLISDYSHVDTFSNDLS---SSGS 74 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~----------~d-~i~iw~~~~~~~~~~~~~~~~~---~~~~ 74 (357)
..+++.+..+.. +..+ .++|+ |++|+++. .+ .|.+||. .+.+.+..+..... +...
T Consensus 38 ~~t~~~~~~i~~-----g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~-~t~~~~~~i~~~~~~~~~g~~ 109 (361)
T 2oiz_A 38 YTNGKFLGMVPT-----AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDA-DKLTFEKEISLPPKRVQGLNY 109 (361)
T ss_dssp TTTCCEEEEEEC-----CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEET-TTCCEEEEEEECTTBCCBCCC
T ss_pred CCCCeEEEEecC-----CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEEC-cCCcEEEEEEcCccccccCCC
Confidence 345566666664 5555 88999 88888886 25 8999999 88888877764110 1245
Q ss_pred eEEEEEecCc--eEEeec--CCeEEEEecCCccceee-eeecCccccceeeeecCCCeEEEecccccccccccccEEEEE
Q 038568 75 VKSITFHITK--IFTAHQ--DCKIRVWKITASRQHQL-VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV 149 (357)
Q Consensus 75 v~~l~~~~~~--l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 149 (357)
...++++|++ |+++.. +++|.+||+.+++.... +.. .. ...+.
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-------------------------------~~-~~~v~ 157 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-------------------------------AG-CWSVI 157 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-------------------------------TT-EEEEE
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-------------------------------CC-cceeE
Confidence 6789999987 666653 68999999998865433 211 11 11234
Q ss_pred Eec---CeEEEEecCCeEEEEEcCc-chhh------hhccccccccEEEEEEecCC-eEEEEeCCCeEEEEEcccccccc
Q 038568 150 VKQ---GLMYSVSWDRSFKIWNASN-YKCL------ESVNKAHEDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNK 218 (357)
Q Consensus 150 ~~~---~~l~~~~~dg~i~iwd~~~-~~~~------~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 218 (357)
+.| ..+++.+.||.+.+|+... ++.. ..+ .....++ .+...+++ .++..+.++.+.++|+...
T Consensus 158 ~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~---- 231 (361)
T 2oiz_A 158 PQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMF-SVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGD---- 231 (361)
T ss_dssp ECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCS-CTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSS----
T ss_pred EcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceE-cCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCC----
Confidence 445 5678888999999998864 4333 112 1112221 22335555 4666678899999998611
Q ss_pred ccccceeeeeEeec------c----ccceeEEEEecCCCEEEEEec-----------CCeEEEEecccCCceeeeeeccC
Q 038568 219 ERKSRHMLVTTLVK------H----RSTVNALALNGDGSLLFSGGC-----------DRWIVVWERERDHRMVFAEALWG 277 (357)
Q Consensus 219 ~~~~~~~~~~~~~~------~----~~~v~~~~~~~~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~~~ 277 (357)
. ......+.. + ......++|+|+++.++++.. .+.|.+||+.+.+. +..+..
T Consensus 232 --~--~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~---v~~i~~ 304 (361)
T 2oiz_A 232 --E--VKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR---VARIPG 304 (361)
T ss_dssp --S--CEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE---EEEEEC
T ss_pred --C--ceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE---EEEEec
Confidence 1 111111110 0 011223789999888777653 35899999998874 334444
Q ss_pred CccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 278 HTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 278 ~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
+. ...++++++ +|++++. +.|.+||..+++ .+.+..+..+......++++|++.
T Consensus 305 ~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~-l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 305 RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPE-PKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSS-CEEEEEETTSCSSEEEEEECCCSC
T ss_pred CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCc-ceeeEEeccCCCCcEEEEecCCCC
Confidence 44 667777665 7777776 999999999861 245566666677788999999875
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=8.4e-15 Score=120.62 Aligned_cols=255 Identities=11% Similarity=0.041 Sum_probs=168.6
Q ss_pred CC-ceEEEeccCCccccceecc---ccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeee
Q 038568 47 LN-EINVFDLISDYSHVDTFSN---DLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRS 121 (357)
Q Consensus 47 ~d-~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 121 (357)
.+ .|.++|. ++++....+.. ..........+.+..+. +++...++.|.+||..+++....+..
T Consensus 15 ~~~~l~~~d~-~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~----------- 82 (328)
T 3dsm_A 15 SNATLSYYDP-ATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG----------- 82 (328)
T ss_dssp CCBEEEEEET-TTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-----------
T ss_pred CCceEEEEEC-CCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-----------
Confidence 37 9999999 88776655421 01133457888888777 55566679999999998876555421
Q ss_pred ecCCCeEEEecccccccccccccEEEEEEec-CeEEEEe-cCCeEEEEEcCcchhhhhccccc----cccEEEEEEecCC
Q 038568 122 VLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVS-WDRSFKIWNASNYKCLESVNKAH----EDAVNAVVVSDNG 195 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~ 195 (357)
......+++++ ..++.+. .++.|.+||..+++....+..+. ......+++ .++
T Consensus 83 --------------------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~ 141 (328)
T 3dsm_A 83 --------------------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK 141 (328)
T ss_dssp --------------------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT
T ss_pred --------------------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC
Confidence 24567888866 5566655 78999999999988776662221 014556677 556
Q ss_pred eEEEEe--CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC----------CeEEEEec
Q 038568 196 VVYTGS--ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD----------RWIVVWER 263 (357)
Q Consensus 196 ~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------g~i~vwd~ 263 (357)
+++++. .++.|.++|+. ..+....+.. ......++++|+|++++++..+ +.|.++|.
T Consensus 142 ~lyv~~~~~~~~v~viD~~----------t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 142 YVYVNCWSYQNRILKIDTE----------TDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp EEEEEECTTCCEEEEEETT----------TTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred EEEEEcCCCCCEEEEEECC----------CCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence 655554 48999999987 2333333332 2345788999999877776554 78999999
Q ss_pred ccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEee-CCCCCCCC
Q 038568 264 ERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAIS-SSSSASNG 340 (357)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~ 340 (357)
.+.+....+... .......++++++ .|+++.. .|.+||..+++... ...+........+++++| ++.
T Consensus 211 ~t~~v~~~~~~~--~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~----- 280 (328)
T 3dsm_A 211 ETFTVEKQFKFK--LGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGE----- 280 (328)
T ss_dssp TTTEEEEEEECC--TTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCC-----
T ss_pred CCCeEEEEEecC--CCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCe-----
Confidence 877643222211 1224677777754 6666554 89999998864211 111222245688999999 444
Q ss_pred eEEEEEc----CCCCeEEecC
Q 038568 341 IVSIGSG----SLNGEIKVWD 357 (357)
Q Consensus 341 ~~~l~s~----~~dg~v~~wd 357 (357)
++++. ..++.|.+||
T Consensus 281 --lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 281 --VYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp --EEEEECTTSSSEEEEEEEC
T ss_pred --EEEEcccccccCCEEEEEC
Confidence 66666 6788999986
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.72 E-value=1.5e-14 Score=120.23 Aligned_cols=250 Identities=9% Similarity=0.068 Sum_probs=157.9
Q ss_pred cceeEEEEecceEEEee---------CC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecC---C--
Q 038568 30 MIISCLAVHNSLLYAAS---------LN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQD---C-- 92 (357)
Q Consensus 30 ~~i~~~~~s~~~l~t~~---------~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d---~-- 92 (357)
..+...+++|+.++... .+ .|.+||+ ++++.. .+ ..+..++|+||+ |+.++.+ +
T Consensus 15 ~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~-~~~~~~-~l-------~~~~~~~~SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 15 AYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENL-KNNARR-FI-------ENATMPRISPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp CEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEET-TTCCEE-EE-------ESCEEEEECTTSSEEEEEEEETTTTEE
T ss_pred EEcccceECCcEEEEEEeecCcccCCccceEEEEeC-CCCceE-Ec-------ccCCCeEECCCCCEEEEEEeccCCCcc
Confidence 34566666877776542 36 8999999 765532 22 357889999997 6666543 3
Q ss_pred eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC---------
Q 038568 93 KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD--------- 161 (357)
Q Consensus 93 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d--------- 161 (357)
.|.+|++.+++..... .+.. +..+.|+| +.|+.++.+
T Consensus 86 ~l~~~~~~~g~~~~l~-------------------------------~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 86 EIWVADLETLSSKKIL-------------------------------EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp EEEEEETTTTEEEEEE-------------------------------EESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred eEEEEECCCCceEEEE-------------------------------cCCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 3777788766533222 1223 88899998 667666532
Q ss_pred ------------------CeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCC-------eEEEEEcccccc
Q 038568 162 ------------------RSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADG-------RIRVWERSVVDH 216 (357)
Q Consensus 162 ------------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-------~i~i~d~~~~~~ 216 (357)
..|.+||+.+++.+..+ .. . .+..+.|+|++.++++..++ ...+|.+..
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l-~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~--- 207 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF-EK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWED--- 207 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEE-EE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEET---
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeee-cC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCC---
Confidence 57999999887764555 23 3 78899999999444444431 445555430
Q ss_pred ccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC--------CeEEEEecccCCceeeeeeccCCccceEE-Eee
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD--------RWIVVWERERDHRMVFAEALWGHTGALLC-LIN 287 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~-~~~ 287 (357)
... ..+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++ .......+...+.. +.|
T Consensus 208 -------~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~~~~~~~~~~~~~ 271 (347)
T 2gop_A 208 -------GKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE---VMGILDEVDRGVGQAKIK 271 (347)
T ss_dssp -------TEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---EEESSTTCCSEEEEEEEE
T ss_pred -------Cce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCc---eEeccccCCcccCCccEE
Confidence 111 122222 344444 9999988877754 3688888 443 22233445666765 777
Q ss_pred cCceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeE-Eec
Q 038568 288 VGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEI-KVW 356 (357)
Q Consensus 288 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v-~~w 356 (357)
+..++++++.++.++|| +.++ +. ..+..+...|.+++|+| . ++++++.++.. ++|
T Consensus 272 sdg~~~~~~~~~~~~l~-~~~g---~~-~~~~~~~~~v~~~~~s~--~-------~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 272 DGKVYFTLFEEGSVNLY-IWDG---EI-KPIAKGRHWIMGFDVDE--I-------VVYLKETATRLRELF 327 (347)
T ss_dssp TTEEEEEEEETTEEEEE-EESS---SE-EEEECSSSEEEEEEESS--S-------EEEEEECSSSCCEEE
T ss_pred cCcEEEEEecCCcEEEE-EcCC---ce-EEEecCCCeEEeeeeeC--c-------EEEEEcCCCChHHhe
Confidence 62288888999999999 8754 22 22334577899999999 4 67776666543 554
No 176
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=1.9e-14 Score=116.93 Aligned_cols=236 Identities=10% Similarity=0.053 Sum_probs=152.0
Q ss_pred cccceeccccCCCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccccc
Q 038568 60 SHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKR 136 (357)
Q Consensus 60 ~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (357)
..+..+.. +.....+++|+|++ ++++..++.|..|+..++ ...+.
T Consensus 18 ~~~~~l~~---~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~--------------------------- 65 (296)
T 3e5z_A 18 AEARRLAD---GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM--------------------------- 65 (296)
T ss_dssp CCCEEEEC---CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE---------------------------
T ss_pred CcEEEEec---CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE---------------------------
Confidence 33444444 66678899999975 677788999999999875 22222
Q ss_pred ccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhcc---ccccccEEEEEEecCCeEEE-----Ee-----
Q 038568 137 LWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVN---KAHEDAVNAVVVSDNGVVYT-----GS----- 201 (357)
Q Consensus 137 ~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~l~~-----~~----- 201 (357)
.+...+.++++++ .++++...++.|.+||..+++...... ......+..++++|+|.+.. |.
T Consensus 66 ---~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~ 142 (296)
T 3e5z_A 66 ---HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEE 142 (296)
T ss_dssp ---SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGG
T ss_pred ---CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccc
Confidence 3446688999998 555555556899999997776433221 11123466899999996544 32
Q ss_pred --------CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecc-cCCceeee
Q 038568 202 --------ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE-RDHRMVFA 272 (357)
Q Consensus 202 --------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~ 272 (357)
..+.|..++.. . ....+..+......++|+|+++.+++.+.++.|++|++. ++......
T Consensus 143 ~~~~~~~~~~~~l~~~~~~-----------g-~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~ 210 (296)
T 3e5z_A 143 GYGGEMELPGRWVFRLAPD-----------G-TLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQG 210 (296)
T ss_dssp SSCCCCCSSSCEEEEECTT-----------S-CEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEE
T ss_pred cccccccCCCcEEEEECCC-----------C-CEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCC
Confidence 12355555432 1 122234455667899999999988777788999999997 33320111
Q ss_pred eeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEe-eCCCCCCCCeEEEEEcCCC
Q 038568 273 EALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAI-SSSSSASNGIVSIGSGSLN 350 (357)
Q Consensus 273 ~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~~~~~~~l~s~~~d 350 (357)
..+..+...+..++++++ .|.++. ++.|.+|+.. + +.+..+..+.. +++++|. |+++ .|+.++.+
T Consensus 211 ~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g---~~~~~~~~~~~-~~~~~f~~~d~~-------~L~v~t~~ 277 (296)
T 3e5z_A 211 VHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-G---DELGRVLTPQT-TSNLCFGGPEGR-------TLYMTVST 277 (296)
T ss_dssp EEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-S---CEEEEEECSSC-CCEEEEESTTSC-------EEEEEETT
T ss_pred eEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-C---CEEEEEECCCC-ceeEEEECCCCC-------EEEEEcCC
Confidence 122223444555666655 333333 7889999986 4 44556666666 8999994 7776 77777777
Q ss_pred CeEEe
Q 038568 351 GEIKV 355 (357)
Q Consensus 351 g~v~~ 355 (357)
+..++
T Consensus 278 ~l~~~ 282 (296)
T 3e5z_A 278 EFWSI 282 (296)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 65553
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=2.2e-15 Score=127.34 Aligned_cols=248 Identities=10% Similarity=0.016 Sum_probs=155.5
Q ss_pred EEeccCCccccceeccccCCCCceEE-----EEEecCc--eEEeec-CC--eEEEEecCCccceeeeeecCccccceeee
Q 038568 52 VFDLISDYSHVDTFSNDLSSSGSVKS-----ITFHITK--IFTAHQ-DC--KIRVWKITASRQHQLVSTLPTVKDRLIRS 121 (357)
Q Consensus 52 iw~~~~~~~~~~~~~~~~~~~~~v~~-----l~~~~~~--l~~~~~-d~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 121 (357)
.++. .++..+..+.. +...... .+|+||+ |+.++. ++ .|.+||+.+++......
T Consensus 14 ~~~~-~~g~~~~~lt~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~------------ 77 (388)
T 3pe7_A 14 YQDA-STGAQVTRLTP---PDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE------------ 77 (388)
T ss_dssp EECT-TTCCEEEECSC---TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC------------
T ss_pred EecC-CCCcceEEecC---CcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee------------
Confidence 3455 66777777775 6666665 8899997 777766 66 48888888775433221
Q ss_pred ecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEE--EecCCeE
Q 038568 122 VLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVV--VSDNGVV 197 (357)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~l 197 (357)
.+...+....|+| +.|+.++.++.|++||+.+++..... ..+...+.... ++|++.+
T Consensus 78 ------------------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~~~~~~dg~~ 138 (388)
T 3pe7_A 78 ------------------GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVY-QVPAEWVGYGTWVANSDCTK 138 (388)
T ss_dssp ------------------SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-ECCTTEEEEEEEEECTTSSE
T ss_pred ------------------CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeee-echhhcccccceeECCCCCe
Confidence 3444444567999 78999999999999999988765544 33444443333 4788853
Q ss_pred EEE-----------------------eCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec-CCCEEEEEe
Q 038568 198 YTG-----------------------SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG-DGSLLFSGG 253 (357)
Q Consensus 198 ~~~-----------------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 253 (357)
+.+ ..+..|.+||+. . .+ ...+..+...+..++|+| +|+.|+...
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~------~----g~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 139 LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK------T----GE-STVILQENQWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT------T----CC-EEEEEEESSCEEEEEEETTEEEEEEEEE
T ss_pred eccccccCcccccccccchhhhhhccCCcceEEEEECC------C----Cc-eEEeecCCccccccEECCCCCCEEEEEE
Confidence 332 234678999987 2 22 223334566789999999 999888776
Q ss_pred cC------CeEEEEecccCCceeeeeeccCCc--cceEEEeecCc--eEEEec-CC----CeEEEeeCCCCcceeeeeee
Q 038568 254 CD------RWIVVWERERDHRMVFAEALWGHT--GALLCLINVGD--LLASGS-AD----RTVRIWQRGKENCYRCMAFL 318 (357)
Q Consensus 254 ~d------g~i~vwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~--~l~~~~-~d----g~i~vw~~~~~~~~~~~~~~ 318 (357)
.+ ..|.++|....... .+..+. ..+....|+|+ .|+..+ .+ +.|++||+.+++. +.+..+
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~ 282 (388)
T 3pe7_A 208 EGPHDLVDARMWLINEDGTNMR----KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSM 282 (388)
T ss_dssp CSCTTTSSCSEEEEETTSCCCE----ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEE
T ss_pred ecCCCCCcceEEEEeCCCCceE----EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcC
Confidence 53 37888887755422 222233 34667778776 454433 22 2499999998743 334344
Q ss_pred cCCcCc---eEEEEEeeCCCCCCCCeEEEEEc---------CCCCeEEecC
Q 038568 319 EGHEKP---VKSLVAISSSSSASNGIVSIGSG---------SLNGEIKVWD 357 (357)
Q Consensus 319 ~~h~~~---v~~~~~~~~~~~~~~~~~~l~s~---------~~dg~v~~wd 357 (357)
.++... ...+.|+|+++ .|+.. ..+..|.+||
T Consensus 283 ~~~~~~~~~~~~~~~spdg~-------~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 283 PACSHLMSNYDGSLMVGDGS-------DAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp CCEEEEEECTTSSEEEEEEC-------CC------------CCCCEEEEEE
T ss_pred CCceeeeecCCCCeEccCCC-------cceeEeeeccccccCCCCEEEEEe
Confidence 432111 12237999987 55532 4566888875
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=9.4e-14 Score=114.36 Aligned_cols=235 Identities=10% Similarity=0.055 Sum_probs=158.3
Q ss_pred cceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEee-cCCeEEEEecCCccce
Q 038568 30 MIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAH-QDCKIRVWKITASRQH 105 (357)
Q Consensus 30 ~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~-~d~~i~vwd~~~~~~~ 105 (357)
.....+++. ++++++...+ .|.+||. .+++.+.++. .......+++++++ ++.+. .++.|.+||..+.+..
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~-~t~~~~~~i~----~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDI-NTFKEVGRIT----GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEET-TTCCEEEEEE----CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEEC-cccEEEEEcC----CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEE
Confidence 456778888 5555555556 9999999 8888888885 45678899998776 55555 7899999999987655
Q ss_pred eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEe--cCCeEEEEEcCcchhhhhcccccc
Q 038568 106 QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVS--WDRSFKIWNASNYKCLESVNKAHE 183 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~ 183 (357)
..+..... .+.......+++..+.++.+. .++.|.++|+.+++.+..+. ..
T Consensus 119 ~~i~~g~~-------------------------~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~--~g 171 (328)
T 3dsm_A 119 GYIECPDM-------------------------DMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELT--IG 171 (328)
T ss_dssp EEEECTTC-------------------------CTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEE--CS
T ss_pred EEEEcCCc-------------------------cccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEE--cC
Confidence 44432110 011113345555555555555 48899999999988777762 23
Q ss_pred ccEEEEEEecCCeEEEEeC-C----------CeEEEEEccccccccccccceeeeeEeecc-ccceeEEEEecCCCEEEE
Q 038568 184 DAVNAVVVSDNGVVYTGSA-D----------GRIRVWERSVVDHNKERKSRHMLVTTLVKH-RSTVNALALNGDGSLLFS 251 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~-d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~ 251 (357)
.....+.++|++.++.++. + +.|.++|.. ..+....+... ......++++|+++.|++
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~----------t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE----------TFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT----------TTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC----------CCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 3456889999997555543 3 689999987 22333333321 236789999999998888
Q ss_pred EecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEe----cCCCeEEEeeCCCCc
Q 038568 252 GGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASG----SADRTVRIWQRGKEN 310 (357)
Q Consensus 252 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~----~~dg~i~vw~~~~~~ 310 (357)
+.. .|.+||..+++... .............++++++ ++++. ..++.|.+||.. ++
T Consensus 242 ~~~--~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp ESS--SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred Ecc--EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC
Confidence 765 89999998776321 1111112345677778762 55555 578999999998 63
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.69 E-value=3.9e-15 Score=134.83 Aligned_cols=244 Identities=9% Similarity=-0.017 Sum_probs=153.0
Q ss_pred cceeccccCCCCceEEEEEecCc--eEEe--ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 62 VDTFSNDLSSSGSVKSITFHITK--IFTA--HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 62 ~~~~~~~~~~~~~v~~l~~~~~~--l~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
...+.+ |...+..++|+++. ++.. +.++...||....+.....+.
T Consensus 16 ~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~---------------------------- 64 (662)
T 3azo_A 16 AALVAS---RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESAL---------------------------- 64 (662)
T ss_dssp HHHHHH---TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESS----------------------------
T ss_pred HHHHhh---cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeC----------------------------
Confidence 344555 88999999999988 4444 457889999964433222221
Q ss_pred cccccccEE---------EEEEe--c--Ce-EEEEec-CCeEEEEEcC--c-chhhhhcccc-----ccccEEEEEEecC
Q 038568 138 WLEHWDAVS---------DLVVK--Q--GL-MYSVSW-DRSFKIWNAS--N-YKCLESVNKA-----HEDAVNAVVVSDN 194 (357)
Q Consensus 138 ~~~~~~~v~---------~~~~~--~--~~-l~~~~~-dg~i~iwd~~--~-~~~~~~~~~~-----~~~~v~~~~~~~~ 194 (357)
.+...+. ...|+ | +. |+.++. +..|.++++. . ++ ...+ .. +...+..++|+||
T Consensus 65 --~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l-~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 65 --PAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPL-TPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp --CTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEEC-SCCCCSTTCEEEEEEEEETT
T ss_pred --CCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEec-cCCccCCCCccccCcEECCC
Confidence 2222222 34444 6 55 554443 5667777765 2 33 3333 22 5667889999999
Q ss_pred C-eEEEEeCC----------CeEEEEEccccccccccccceeeeeEee-ccccceeEEEEecCCCEEEEEecC-------
Q 038568 195 G-VVYTGSAD----------GRIRVWERSVVDHNKERKSRHMLVTTLV-KHRSTVNALALNGDGSLLFSGGCD------- 255 (357)
Q Consensus 195 ~-~l~~~~~d----------~~i~i~d~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------- 255 (357)
| .|++++.+ ..|++||+..... ..... ...+. .+...+..++|+|||++|+.++.+
T Consensus 141 g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~ 215 (662)
T 3azo_A 141 RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA----ADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWE 215 (662)
T ss_dssp TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT----TCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTT
T ss_pred CCEEEEEEecccCCCCCCceeEEEEEECCCCcc----ccCCc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCC
Confidence 9 57777766 5899999872000 00011 12333 455678889999999999987755
Q ss_pred -CeEEEEecc-cCCceeeeeeccCCccceEEEeecCc--eEEEecCCC--eEEEeeCCCCcceeeeeeecCCcCc-----
Q 038568 256 -RWIVVWERE-RDHRMVFAEALWGHTGALLCLINVGD--LLASGSADR--TVRIWQRGKENCYRCMAFLEGHEKP----- 324 (357)
Q Consensus 256 -g~i~vwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg--~i~vw~~~~~~~~~~~~~~~~h~~~----- 324 (357)
..|++||+. ++..........++...+..+.|+++ +++++..++ .|.+||+.+++ .......+...
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLW 292 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCC
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc---eeecccccccccCccc
Confidence 379999998 45211122223345677888888766 777888888 56666665552 22222222222
Q ss_pred ---eEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 325 ---VKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 325 ---v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
+..++|+|++. ++++++. +.++||
T Consensus 293 ~~~~~~~~~~~~~~-------~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 293 TPGMRWFAPLANGL-------IAVVHGK-GAAVLG 319 (662)
T ss_dssp STTCCSEEECTTSC-------EEEEEBS-SSCEEE
T ss_pred cccCceEeEeCCCE-------EEEEEEc-CccEEE
Confidence 56788888887 8888888 888888
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.68 E-value=2.8e-13 Score=118.78 Aligned_cols=266 Identities=12% Similarity=0.167 Sum_probs=175.9
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecC--CccceeeeeecCc
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKIT--ASRQHQLVSTLPT 113 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~--~~~~~~~~~~~~~ 113 (357)
+.++++...+ .|.++|. .+++.+..+. ....+..+.|+|++ +++++.|+.|.+||+. +.+....+..
T Consensus 167 ~~~~V~~~~~~~V~viD~-~t~~v~~~i~----~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--- 238 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDG-STYEIKTVLD----TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--- 238 (567)
T ss_dssp GEEEEEETTTTEEEEEET-TTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC---
T ss_pred ceEEEEeCCCCeEEEEEC-CCCeEEEEEe----CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec---
Confidence 3445555566 9999999 8888888887 45567799999997 7888899999999995 5544433321
Q ss_pred cccceeeeecCCCeEEEecccccccccccccEEEEEEe----c--CeEEEEe-cCCeEEEEEcCcchhhhhcccc-----
Q 038568 114 VKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK----Q--GLMYSVS-WDRSFKIWNASNYKCLESVNKA----- 181 (357)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~--~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~----- 181 (357)
......++|+ | +++++++ .++.+.++|..+.+.+..+...
T Consensus 239 ----------------------------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~ 290 (567)
T 1qks_A 239 ----------------------------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYD 290 (567)
T ss_dssp ----------------------------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTT
T ss_pred ----------------------------CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccc
Confidence 1235688888 5 5666555 4699999999998887776311
Q ss_pred ----c-cccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe-
Q 038568 182 ----H-EDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG- 253 (357)
Q Consensus 182 ----~-~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 253 (357)
| ...+..+..++++ .++....+|.|.++|.... . ...+..+ ........+.|+|++++++++.
T Consensus 291 ~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~------~--~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 291 EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL------N--NLKTTEI-SAERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS------S--EEEEEEE-ECCSSEEEEEECTTSCEEEEEEG
T ss_pred cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCC------c--cceeeee-eccccccCceECCCCCEEEEEeC
Confidence 1 2257788888876 3666677899999998621 1 1112222 2334566889999999887765
Q ss_pred cCCeEEEEecccCCceeeeee--ccCCccceEEEeecC--c-eEEEec-CCCeEEEeeCCCCc----ceeeeeeecCCcC
Q 038568 254 CDRWIVVWERERDHRMVFAEA--LWGHTGALLCLINVG--D-LLASGS-ADRTVRIWQRGKEN----CYRCMAFLEGHEK 323 (357)
Q Consensus 254 ~dg~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~--~-~l~~~~-~dg~i~vw~~~~~~----~~~~~~~~~~h~~ 323 (357)
.++.|.++|+.+++....+.. ...|.+.-..+ +++ . ..+++. .++.|.++|..+.+ .++.+..+.....
T Consensus 362 ~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~ 440 (567)
T 1qks_A 362 ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG 440 (567)
T ss_dssp GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS
T ss_pred CCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC
Confidence 578899999998875444332 12343322223 333 3 445543 56899999998732 1456666665444
Q ss_pred ceEEEEEeeCCCCCCCCeEEEEEcCC-------CCeEEecC
Q 038568 324 PVKSLVAISSSSSASNGIVSIGSGSL-------NGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~~~~~~~~~~~l~s~~~-------dg~v~~wd 357 (357)
.-..+..+|+++ +|..... .+.|.++|
T Consensus 441 g~~~i~~~p~~~-------~l~v~~~~~~~~~~~~~v~v~d 474 (567)
T 1qks_A 441 GSLFIKTHPNSQ-------YLYVDATLNPEAEISGSVAVFD 474 (567)
T ss_dssp CCCCEECCTTCS-------EEEEECTTCSSHHHHTCEEEEE
T ss_pred CCEEEEeCCCCC-------eEEEecCCCCCcccCceEEEEE
Confidence 334577899987 5555431 34676664
No 181
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=2.4e-12 Score=104.47 Aligned_cols=268 Identities=8% Similarity=-0.034 Sum_probs=170.0
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEe-ecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTA-HQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~-~~d~~i~vwd~~~~ 102 (357)
+...+.+++++ |+++++...+ .|.+||. . ++ ...+... .....+.++++.+++ +..+ ..++.|..|+.. +
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~-~-~~-~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINL-D-GK-ITEYPLP-TPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CC-EEEEECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcC-C-CC-eEEecCC-cccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 55789999998 6666655556 9999998 5 33 3333210 145679999999887 4444 447889999976 3
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNK 180 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 180 (357)
+. ..+. .+ .....+..+++.+ .++++...++.|..||. +++.......
T Consensus 88 ~~-~~~~-~~---------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 137 (299)
T 2z2n_A 88 II-KEYT-LP---------------------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELP 137 (299)
T ss_dssp CE-EEEE-CS---------------------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred cE-EEEe-CC---------------------------CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCC
Confidence 21 1111 10 2234678899988 44455556789999998 4443322112
Q ss_pred cccccEEEEEEecCCeEEE-EeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEE
Q 038568 181 AHEDAVNAVVVSDNGVVYT-GSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259 (357)
Q Consensus 181 ~~~~~v~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 259 (357)
.....+..+++.+++.+.. ...++.|..||.. . ... ..........+..++++++++++++...++.|.
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g--------~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITES-G--------DIT-EFKIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-C--------CEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCC-C--------cEE-EeeCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 3445788999999986544 4456899999863 1 111 111223345678999999998777766788999
Q ss_pred EEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCC
Q 038568 260 VWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSA 337 (357)
Q Consensus 260 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 337 (357)
+||. ++... .. ....+...+.++.++++ ++++...++.|..||.. ++ .. ...+..+...+.++++ +++.
T Consensus 208 ~~~~-~g~~~-~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~-~~-~~~~~~~~~~~~~i~~-~~g~-- 278 (299)
T 2z2n_A 208 RITT-SGEIT-EF-KIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI-IE-EYPIQIKSAEPHGICF-DGET-- 278 (299)
T ss_dssp EECT-TCCEE-EE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE-EE-EEECSSSSCCEEEEEE-CSSC--
T ss_pred EECC-CCcEE-EE-ECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc-eE-EEeCCCCCCccceEEe-cCCC--
Confidence 9999 55422 21 22334456778888765 45555567899999983 31 22 1223345567899999 8887
Q ss_pred CCCeEEEEEcCCCCeEE
Q 038568 338 SNGIVSIGSGSLNGEIK 354 (357)
Q Consensus 338 ~~~~~~l~s~~~dg~v~ 354 (357)
+.++.+.++.++
T Consensus 279 -----l~v~~~~~~l~~ 290 (299)
T 2z2n_A 279 -----IWFAMECDKIGK 290 (299)
T ss_dssp -----EEEEETTTEEEE
T ss_pred -----EEEEecCCcEEE
Confidence 666655454444
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=7.3e-14 Score=127.88 Aligned_cols=268 Identities=10% Similarity=0.042 Sum_probs=150.3
Q ss_pred eEEEEe--cceEEEeeCC-ce---------EEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEe
Q 038568 33 SCLAVH--NSLLYAASLN-EI---------NVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWK 98 (357)
Q Consensus 33 ~~~~~s--~~~l~t~~~d-~i---------~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd 98 (357)
..++|| |++|+.++.+ .+ .+||+ .+++.. .+.. +...+...+|+||+ |+.+ .|+.|.+|+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~-~~~~~~-~l~~---~~~~~~~~~~SPdG~~la~~-~~~~i~~~~ 138 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL-NKRQLI-TEER---IPNNTQWVTWSPVGHKLAYV-WNNDIYVKI 138 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET-TTTEEC-CSSC---CCTTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEEC-CCCcEE-Eccc---CCCcceeeEECCCCCEEEEE-ECCeEEEEE
Confidence 447778 8999998876 54 59999 776654 3554 78899999999998 6665 578999999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEeccccccccccc---------ccEEEEEEec--CeEEEEec-------
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHW---------DAVSDLVVKQ--GLMYSVSW------- 160 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~~--~~l~~~~~------- 160 (357)
+.+++..+.... ...... +.++. .....+.|+| +.|+.++.
T Consensus 139 ~~~~~~~~lt~~--g~~~~~-------------------~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~ 197 (740)
T 4a5s_A 139 EPNLPSYRITWT--GKEDII-------------------YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPL 197 (740)
T ss_dssp STTSCCEECCSC--CBTTTE-------------------EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCE
T ss_pred CCCCceEEEcCC--CCccce-------------------ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCce
Confidence 988764322111 000000 00111 1112244444 33333321
Q ss_pred -----------------------------CCeEEEEEcCc---chh--hhhccc-----cccccEEEEEEecCCe-EEEE
Q 038568 161 -----------------------------DRSFKIWNASN---YKC--LESVNK-----AHEDAVNAVVVSDNGV-VYTG 200 (357)
Q Consensus 161 -----------------------------dg~i~iwd~~~---~~~--~~~~~~-----~~~~~v~~~~~~~~~~-l~~~ 200 (357)
...|.+||+.+ ++. ...+.. .+...+..++|+||+. ++..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 198 IEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277 (740)
T ss_dssp EEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEE
T ss_pred EEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEE
Confidence 12588899988 632 222211 3677899999999996 4433
Q ss_pred e----CCCeEEEEEccccccccccccceeeeeEe--ecccccee-----EEEEecCCCEEE-EEec-C--CeEEEEeccc
Q 038568 201 S----ADGRIRVWERSVVDHNKERKSRHMLVTTL--VKHRSTVN-----ALALNGDGSLLF-SGGC-D--RWIVVWERER 265 (357)
Q Consensus 201 ~----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~-----~~~~~~~~~~l~-~~~~-d--g~i~vwd~~~ 265 (357)
. .+..|.+||+.+.+... .......+ ..+...+. ..+|+|||+.|+ ..+. + ..|++||+.+
T Consensus 278 ~~r~~~~~~i~~~d~~tg~~~~----~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~ 353 (740)
T 4a5s_A 278 LRRIQNYSVMDICDYDESSGRW----NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDK 353 (740)
T ss_dssp EESSTTEEEEEEEEEETTTTEE----EECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTC
T ss_pred eCCCCCEEEEEEEECCCCcccc----ceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCC
Confidence 2 23479999987321000 00001111 33554444 788999999776 5553 3 4688888886
Q ss_pred CCceeeeeeccCCccceEE-EeecCc-eEEEecC----CCeEEEe--eCCCCcceeeeee-ecCCcCceEEEEEeeCCC
Q 038568 266 DHRMVFAEALWGHTGALLC-LINVGD-LLASGSA----DRTVRIW--QRGKENCYRCMAF-LEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 266 ~~~~~~~~~~~~~~~~v~~-~~~~~~-~l~~~~~----dg~i~vw--~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~ 335 (357)
+... .+......+.. +.++++ .++++.. .+...|| ++..++..+++.. +.+.........|+|+++
T Consensus 354 ~~~~----~lT~g~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~ 428 (740)
T 4a5s_A 354 KDCT----FITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAK 428 (740)
T ss_dssp SSCE----ESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSS
T ss_pred CceE----ecccCCEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCC
Confidence 6532 22223334433 346666 3344443 2344454 4443311111110 112345688999999987
No 183
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.66 E-value=1.1e-13 Score=110.90 Aligned_cols=230 Identities=9% Similarity=0.066 Sum_probs=150.3
Q ss_pred ceEEEEEecCc-eEE-e-ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE
Q 038568 74 SVKSITFHITK-IFT-A-HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150 (357)
Q Consensus 74 ~v~~l~~~~~~-l~~-~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 150 (357)
...++++.+++ ++. + ..++.|.+|+..+..... ... .+...+.++++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~-----------------------------~~~~~p~~i~~ 74 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPF-----------------------------NGLYQPQGLAV 74 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCC-----------------------------CSCCSCCCEEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Eee-----------------------------CCcCCcceeEE
Confidence 77899999987 444 4 677899999876543211 100 22245677888
Q ss_pred ec-CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeee
Q 038568 151 KQ-GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVT 228 (357)
Q Consensus 151 ~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 228 (357)
.+ ..++.+..++.|.+||...... ..+.......+..+++++++. +++...++.|.+|+... .....
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~----------~~~~~ 143 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS----------KTQTV 143 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC----------CSCEE
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC----------ceeEe
Confidence 88 4455555588999999875443 223123335788999999986 44445678999997541 11111
Q ss_pred EeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeC
Q 038568 229 TLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQR 306 (357)
Q Consensus 229 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~ 306 (357)
........+.+++++++++++++...++.|.+||........ ....+......++++++ ++++...++.|.+|+.
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV---LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE---CCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECT
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe---ecccCCCCceEEEECCCCCEEEEECCCCcEEEEcC
Confidence 111223457889999999977777778899999988654321 11223355677777765 5566666889999998
Q ss_pred CCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 307 GKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 307 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.... .......+...+.++++++++. ++++...++.|++++
T Consensus 221 ~~~~---~~~~~~~~~~~p~~i~~~~~g~-------l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 221 GSTT---STVLPFTGLNTPLAVAVDSDRT-------VYVADRGNDRVVKLT 261 (270)
T ss_dssp TCSC---CEECCCCSCSCEEEEEECTTCC-------EEEEEGGGTEEEEEC
T ss_pred CCCc---ceeeccCCCCCceeEEECCCCC-------EEEEECCCCEEEEEc
Confidence 7642 1122223335689999999988 888888899999875
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.65 E-value=3.2e-13 Score=109.69 Aligned_cols=232 Identities=8% Similarity=0.031 Sum_probs=149.7
Q ss_pred CccceeEEEEe--cc-eEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEe-ecCCeEEEEecCC
Q 038568 28 HHMIISCLAVH--NS-LLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTA-HQDCKIRVWKITA 101 (357)
Q Consensus 28 h~~~i~~~~~s--~~-~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~-~~d~~i~vwd~~~ 101 (357)
+.....+++|+ ++ +++++..+ .|..|+. +++ ...+.. +...+.++++++++ ++.+ ..++.|.+||..+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~-~~~--~~~~~~---~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSD-DGQ--LSPEMH---PSHHQNGHCLNKQGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEET-TSC--EEEEES---SCSSEEEEEECTTCCEEEEETTTTEEEEECSTT
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEEC-CCC--eEEEEC---CCCCcceeeECCCCcEEEEecCCCeEEEEcCCC
Confidence 55678899999 66 77788888 9999999 665 566665 77889999999987 4444 4468999999977
Q ss_pred ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEE----Ee-------------cCC
Q 038568 102 SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYS----VS-------------WDR 162 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~----~~-------------~dg 162 (357)
++.......... .....+.++++++ +++++ |+ ..+
T Consensus 100 g~~~~~~~~~~~--------------------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 100 GEWESIADSFEG--------------------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp CCEEEEECEETT--------------------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred CcEEEEeeccCC--------------------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 754322211100 1123466788888 45554 32 134
Q ss_pred eEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccce-eeeeEeeccccceeEE
Q 038568 163 SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRH-MLVTTLVKHRSTVNAL 240 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~ 240 (357)
.|..++.. ++ +..+ ..+......++|+|++. +++.+.++.|.+||+.. .. .. .....+..+...+..+
T Consensus 154 ~l~~~~~~-g~-~~~~-~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~------~g-~~~~~~~~~~~~~~~p~~i 223 (296)
T 3e5z_A 154 WVFRLAPD-GT-LSAP-IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA------RG-ETEYQGVHFTVEPGKTDGL 223 (296)
T ss_dssp EEEEECTT-SC-EEEE-ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS------SS-CEEEEEEEECCSSSCCCSE
T ss_pred EEEEECCC-CC-EEEe-ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC------CC-cCcCCCeEeeCCCCCCCeE
Confidence 56666654 33 3333 34556678999999994 66667789999999851 00 01 0011122345567889
Q ss_pred EEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeec-Cc--eEEEecCCCeEEEeeCCCC
Q 038568 241 ALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV-GD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 241 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
+++++|+++++. ++.|.+||.+ ++.. ..+..+.. +.+++|. ++ .|++++.++ +.-++..+.
T Consensus 224 ~~d~~G~l~v~~--~~~v~~~~~~-g~~~---~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 224 RVDAGGLIWASA--GDGVHVLTPD-GDEL---GRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEBTTSCEEEEE--TTEEEEECTT-SCEE---EEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred EECCCCCEEEEc--CCeEEEECCC-CCEE---EEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 999999866665 7889999987 4432 33333444 7777774 44 677777664 555555553
No 185
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.64 E-value=4.6e-14 Score=128.25 Aligned_cols=270 Identities=9% Similarity=0.018 Sum_probs=160.3
Q ss_pred EEecceEEEeeCC----ceEEEecc-CCccccceecc---ccCCCCceEEEEEecCc--eE-----EeecCCeEEEEecC
Q 038568 36 AVHNSLLYAASLN----EINVFDLI-SDYSHVDTFSN---DLSSSGSVKSITFHITK--IF-----TAHQDCKIRVWKIT 100 (357)
Q Consensus 36 ~~s~~~l~t~~~d----~i~iw~~~-~~~~~~~~~~~---~~~~~~~v~~l~~~~~~--l~-----~~~~d~~i~vwd~~ 100 (357)
...|++++-...+ .-.||... ..++....+.. ..+|...+..++|+||+ |+ .|+.+..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 3447777665532 34555541 23332222221 01255578999999997 55 33445789999999
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCe-------------EE
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRS-------------FK 165 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~-------------i~ 165 (357)
+++... ...+. . .....++|+| +.|+.++.|.. |+
T Consensus 156 tg~~~~-~~~~~---------------------------~--~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 156 SGEWSK-VDVIE---------------------------G--GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp TCCBCS-SCCBS---------------------------C--CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred CCCCcC-CcccC---------------------------c--ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 886431 00100 1 1125788999 67888887766 99
Q ss_pred EEEcCcchhh--hhcc-ccccccEEEEEEecCC-eEEEEeCCC----eEEEEEccccccccccccceeeeeEeeccccce
Q 038568 166 IWNASNYKCL--ESVN-KAHEDAVNAVVVSDNG-VVYTGSADG----RIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV 237 (357)
Q Consensus 166 iwd~~~~~~~--~~~~-~~~~~~v~~~~~~~~~-~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v 237 (357)
+|++.+++.. ..+. ..+...+..+.|+|+| +|+..+.++ .|.+++.. .. ....+..+...+
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~----------~~-~~~~l~~~~~~~ 274 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG----------EK-DFRLLVKGVGAK 274 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT----------CS-SCEEEEECSSCC
T ss_pred EEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC----------CC-ceEEeecCCCce
Confidence 9999887632 1111 2344678899999999 466655554 56666542 11 123333444555
Q ss_pred eEEEEecCCCEEEEEe---cCCeEEEEecccCCceeeeeeccCC-ccceEEEeecCc-eEEEecCCCeEEEeeCC-CCcc
Q 038568 238 NALALNGDGSLLFSGG---CDRWIVVWERERDHRMVFAEALWGH-TGALLCLINVGD-LLASGSADRTVRIWQRG-KENC 311 (357)
Q Consensus 238 ~~~~~~~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~-~~~~ 311 (357)
....+ +++.+++... .++.|.+||+.++...........+ ...+..+++.++ ++++...|+..+||.+. ++
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g-- 351 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG-- 351 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC--
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC--
Confidence 56666 5666444443 2588999999876421011112222 445666777665 77888889988888765 23
Q ss_pred eeeeeeecCC-cCceEEEEEeeCCCCCCCCeEEEE----EcCCCCeEEecC
Q 038568 312 YRCMAFLEGH-EKPVKSLVAISSSSSASNGIVSIG----SGSLNGEIKVWD 357 (357)
Q Consensus 312 ~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~l~----s~~~dg~v~~wd 357 (357)
.....+..+ .+.|..+.++|+++ .++ +....+.|++||
T Consensus 352 -~~~~~l~~~~~~~v~~~~~s~d~~-------~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 352 -KPVRTVQLPGVGAASNLMGLEDLD-------DAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp -CEEEECCCSSSSEECCCBSCTTCS-------EEEEEEEETTEEEEEEEEE
T ss_pred -CeeEEecCCCCeEEEEeecCCCCC-------EEEEEEcCCCCCCEEEEEE
Confidence 233444444 56788888888876 554 444557788775
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=2.9e-13 Score=108.32 Aligned_cols=231 Identities=10% Similarity=0.046 Sum_probs=149.4
Q ss_pred ceeEEEEe--cceEE-EeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccce
Q 038568 31 IISCLAVH--NSLLY-AASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQH 105 (357)
Q Consensus 31 ~i~~~~~s--~~~l~-t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~ 105 (357)
...+++++ |++++ +...+ .|.+|+. .+......... +...+.++++.+++ |+.+..++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~-~~~~~~~~~~~---~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLAT-GSTGTTVLPFN---GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------EECCCC---SCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecC-CCcccceEeeC---CcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe
Confidence 67889998 66665 43566 9999998 55433221121 34567889999876 555555889999998765321
Q ss_pred eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhcccccc
Q 038568 106 QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHE 183 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 183 (357)
.+.. .....+..+++.+ .++++...++.|.+|+..+....... ....
T Consensus 101 -~~~~-----------------------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~~~~ 149 (270)
T 1rwi_B 101 -VLPF-----------------------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-FTGL 149 (270)
T ss_dssp -ECCC-----------------------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-CCSC
T ss_pred -eeec-----------------------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-cccC
Confidence 1110 1224578899988 55555566789999986554432222 2233
Q ss_pred ccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEe
Q 038568 184 DAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE 262 (357)
Q Consensus 184 ~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 262 (357)
..+..+++++++. +++...++.|.+||... .........+...+.+++++++|.++++...++.|.+||
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~----------~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAES----------NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTT----------CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCC----------CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 4678899999886 44445678999999761 111111122235678999999998777777788999999
Q ss_pred cccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 263 RERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
........ ....+...+.+++++++ ++++...++.|++++....
T Consensus 220 ~~~~~~~~---~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 220 AGSTTSTV---LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp TTCSCCEE---CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCccee---eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 87654221 11223345677777654 7778888999999999865
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.64 E-value=1.2e-12 Score=108.11 Aligned_cols=234 Identities=12% Similarity=0.088 Sum_probs=143.9
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEe-ecC----CeEEEEe
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTA-HQD----CKIRVWK 98 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~-~~d----~~i~vwd 98 (357)
+...+.+++|+ |++++++..+ .|.+||. ++++....... +...+.++++++++ ++.+ ..+ +.|.+||
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~-~~~~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINP-ETKEIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECT-TTCCEEEEEEC---SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeC-CCCcEEEEeeC---CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 66678999998 7777777888 9999999 77665544433 66789999999987 4444 444 5899999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEec-------CCeEEEEEcC
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSW-------DRSFKIWNAS 170 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~-------dg~i~iwd~~ 170 (357)
..++.....+... .+...+.++++++ ..++.++. .+.|..+|..
T Consensus 119 ~~~~~~~~~~~~~----------------------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 119 ENGDNLQDIIEDL----------------------------STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp TTSCSCEEEECSS----------------------------SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred CCCCEEEEEEccC----------------------------ccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 8876543222110 2235688999998 44444443 3556666665
Q ss_pred cchhhhhccccccccEEEEEEecCCe-E-EEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCE
Q 038568 171 NYKCLESVNKAHEDAVNAVVVSDNGV-V-YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSL 248 (357)
Q Consensus 171 ~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 248 (357)
+++.. .+ ......+..++++|++. + ++...++.|.+||+........ .........+.++ ..+..++++++|++
T Consensus 171 ~~~~~-~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~-~~~~~~~~~~~~~-~~~~~i~~d~~G~l 246 (333)
T 2dg1_A 171 FRTVT-PI-IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQ-PFGATIPYYFTGH-EGPDSCCIDSDDNL 246 (333)
T ss_dssp SCCEE-EE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEE-EEEEEEEEECCSS-SEEEEEEEBTTCCE
T ss_pred CCEEE-Ee-ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcc-cccceEEEecCCC-CCCCceEECCCCCE
Confidence 44332 22 22334578899999983 5 4445678999999852100000 0000011111222 46788999999998
Q ss_pred EEEEecCCeEEEEecccCCceeeeeecc---CCccceEEEeecCc--eEEEecCC
Q 038568 249 LFSGGCDRWIVVWERERDHRMVFAEALW---GHTGALLCLINVGD--LLASGSAD 298 (357)
Q Consensus 249 l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~--~l~~~~~d 298 (357)
+++...++.|.+||.+ ++....+.... +|...+.+++++++ .|+.++.+
T Consensus 247 ~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 247 YVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 8887778999999984 44332222111 12225677777654 55555444
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=2.7e-13 Score=123.57 Aligned_cols=241 Identities=10% Similarity=0.033 Sum_probs=150.8
Q ss_pred CCCceEEEEEecCc--eEEeecCC-----eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccc
Q 038568 71 SSGSVKSITFHITK--IFTAHQDC-----KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWD 143 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
+...+..++|+||+ |+.+..++ .|++||+.+++...... . ..
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~------------------------------~-~~ 171 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL------------------------------E-RV 171 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE------------------------------E-EE
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc------------------------------c-Cc
Confidence 44468899999997 55544332 89999999886543211 1 12
Q ss_pred cEEEEEEec--CeEEEEecCCe----------------EEEEEcCcchhhhh--cc-ccccccEEEEEEecCCe-EEEEe
Q 038568 144 AVSDLVVKQ--GLMYSVSWDRS----------------FKIWNASNYKCLES--VN-KAHEDAVNAVVVSDNGV-VYTGS 201 (357)
Q Consensus 144 ~v~~~~~~~--~~l~~~~~dg~----------------i~iwd~~~~~~~~~--~~-~~~~~~v~~~~~~~~~~-l~~~~ 201 (357)
.+..++|+| +.|+.++.++. |++|++.+++.... +. ..+...+..+.|+|+|. |+..+
T Consensus 172 ~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 172 KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 256789998 67888877765 99999988763311 11 22445678999999994 55554
Q ss_pred C-----CCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC----CeEEEEecccCCceeee
Q 038568 202 A-----DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD----RWIVVWERERDHRMVFA 272 (357)
Q Consensus 202 ~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~~ 272 (357)
. +..|.+||+........+. .....+..+...+.. .|+|+|+.|+..+.. +.|.+||+.++... ..
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~ 326 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGI---LKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-KW 326 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSS---CCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GC
T ss_pred EccCCCccEEEEEECcccccccCCc---cceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cc
Confidence 3 5789999987200000010 123334445555544 488888877766553 36999999876421 11
Q ss_pred eeccCCcc--ceEEEeec-Cc-eEEEecCCCe--EEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEE-
Q 038568 273 EALWGHTG--ALLCLINV-GD-LLASGSADRT--VRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIG- 345 (357)
Q Consensus 273 ~~~~~~~~--~v~~~~~~-~~-~l~~~~~dg~--i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~- 345 (357)
..+..|.. .+..+.+. ++ ++++...|+. |++|++.++ +.+..+..+.+.|..+.++|+++ .++
T Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g---~~~~~l~~~~~~v~~~~~s~d~~-------~l~~ 396 (710)
T 2xdw_A 327 KVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATG---ALLKIFPLEVGSVVGYSGQKKDT-------EIFY 396 (710)
T ss_dssp EEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTC---CEEEEECCCSSEEEEEECCTTCS-------EEEE
T ss_pred eeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCC---CEEEecCCCCceEEEEecCCCCC-------EEEE
Confidence 22223333 56677776 44 7777878875 556676565 34455666777889999998875 443
Q ss_pred E---cCCCCeEEecC
Q 038568 346 S---GSLNGEIKVWD 357 (357)
Q Consensus 346 s---~~~dg~v~~wd 357 (357)
+ ....+.|.+||
T Consensus 397 ~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 397 QFTSFLSPGIIYHCD 411 (710)
T ss_dssp EEECSSCCCEEEEEE
T ss_pred EEeCCCCCCEEEEEE
Confidence 2 23456777775
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.62 E-value=1.1e-13 Score=114.45 Aligned_cols=170 Identities=10% Similarity=0.005 Sum_probs=125.4
Q ss_pred ceeEEEEe--cceEEEeeCCceEEEeccCCcc-----------ccceeccccCCCCceEEEEEecCc-eEEeecCCeEEE
Q 038568 31 IISCLAVH--NSLLYAASLNEINVFDLISDYS-----------HVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRV 96 (357)
Q Consensus 31 ~i~~~~~s--~~~l~t~~~d~i~iw~~~~~~~-----------~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~v 96 (357)
+++.++++ ..++++|+.+.+++|++ +..+ ...... +.. |+.|+| .+. |+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~-~~l~~~~~~~~~~~~~~~~~~----lp~-V~~l~f-d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGEL-QLLRDHITSDSTPLTFKWEKE----IPD-VIFVCF-HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEH-HHHHHHHHSSSCCCCCSEEEE----CTT-EEEEEE-ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEh-hHhhhhhccccccccceEEee----CCC-eeEEEE-CCCEEEEE-cCCcEEE
Confidence 68999999 88899999887777998 5433 111222 666 999999 333 6666 8899999
Q ss_pred EecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhh
Q 038568 97 WKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLE 176 (357)
Q Consensus 97 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 176 (357)
||+.+........ .|...+.++.+.+..+++++.||.|.+||+.++....
T Consensus 111 ~dv~sl~~~~~~~------------------------------~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~ 160 (388)
T 1xip_A 111 LDLEELSEFRTVT------------------------------SFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ 160 (388)
T ss_dssp EESSSTTCEEEEE------------------------------ECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEchhhhccCccc------------------------------eeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc
Confidence 9998765433222 4455677887777559999999999999998766532
Q ss_pred hccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEe------e---ccccceeEEEEecCCC
Q 038568 177 SVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL------V---KHRSTVNALALNGDGS 247 (357)
Q Consensus 177 ~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~ 247 (357)
+...|+|++|+|+| ++.|..||.+++|+.... .. .....+ . +|...|.++.|.+++.
T Consensus 161 -----~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~------~~--~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 161 -----LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNG------EM--EKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp -----EEESEEEEEECSSE-EEEEETTSCEEEEEEETT------EE--EEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred -----ccCCceEEEEcCCc-eEEEEcCCcEEEEcCCCc------cc--cccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 45689999999999 788999999999987621 10 002222 2 3678899999999998
Q ss_pred EEEEE
Q 038568 248 LLFSG 252 (357)
Q Consensus 248 ~l~~~ 252 (357)
++++-
T Consensus 227 flv~y 231 (388)
T 1xip_A 227 FLAVF 231 (388)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88763
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.61 E-value=8.1e-13 Score=105.64 Aligned_cols=203 Identities=8% Similarity=0.032 Sum_probs=138.7
Q ss_pred ecCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEeccccccccccc-ccEEEEEEec--CeEE
Q 038568 81 HITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHW-DAVSDLVVKQ--GLMY 156 (357)
Q Consensus 81 ~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~--~~l~ 156 (357)
+|+. |++++.|+.|.+||.++++....+.. +. ..+.++.+.| ++++
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~------------------------------~~~~~~~~~~~~pdG~ilv 52 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPL------------------------------EKGWECNSVAATKAGEILF 52 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEEC------------------------------CTTCCCCEEEECTTSCEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCC------------------------------CccCCCcCeEECCCCCEEE
Confidence 4666 88999999999999988876655442 22 3567888888 5555
Q ss_pred EEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeC-CCeEEEEEccccccccccccceeeeeEee---
Q 038568 157 SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSA-DGRIRVWERSVVDHNKERKSRHMLVTTLV--- 231 (357)
Q Consensus 157 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--- 231 (357)
+.++.|..||. +++.+..+.......+.++.+.++|. +++.+. ++.|..+|.. .+.+..+.
T Consensus 53 --s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-----------Gk~l~~~~~~~ 118 (276)
T 3no2_A 53 --SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-----------GEVLSKTEFET 118 (276)
T ss_dssp --ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-----------SCEEEEEEECC
T ss_pred --eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-----------CCEEEEEeccC
Confidence 45788999998 88888888333345788899999995 555555 6777777653 22222221
Q ss_pred ---ccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEe--ecCceEEEecCCCeEEEeeC
Q 038568 232 ---KHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLI--NVGDLLASGSADRTVRIWQR 306 (357)
Q Consensus 232 ---~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~dg~i~vw~~ 306 (357)
.+......+++.++|+++++...++.|.+||.+ ++.+..... . ....... ..++.++++..++.|..+|.
T Consensus 119 ~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~---~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 119 GIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL---S-GTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp SCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC---S-SCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred CCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC---C-CCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 122345567788999999999999999999998 775443332 2 1222233 34558888888889999999
Q ss_pred CCCcceeeeeeecCC------cCceEEEEEeeCCC
Q 038568 307 GKENCYRCMAFLEGH------EKPVKSLVAISSSS 335 (357)
Q Consensus 307 ~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~ 335 (357)
.+++ .+..+..+ -..+.++...+++.
T Consensus 194 ~tG~---~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 194 ESNR---IVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp TTCC---EEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred cCCc---EEEEecCCCCCCccccccccceEcCCCC
Confidence 9874 33333322 12377888888887
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.61 E-value=8.2e-13 Score=105.61 Aligned_cols=187 Identities=11% Similarity=0.030 Sum_probs=136.8
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCC-CceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCccc
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSS-GSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVK 115 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 115 (357)
+++|++++.+ .|.+||. ++++.+..+.. +. ..+.++.+.|++ ++. +.++.|..||. +++.+..+..
T Consensus 5 ~~~lv~~~~~~~v~~~d~-~tG~~~w~~~~---~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~----- 73 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINK-DTKEIVWEYPL---EKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAA----- 73 (276)
T ss_dssp CEEEEECTTCSEEEEEET-TTTEEEEEEEC---CTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEEC-----
T ss_pred CcEEEeeCCCCEEEEEEC-CCCeEEEEeCC---CccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcC-----
Confidence 6889999999 9999999 89999999886 54 578899999998 554 55788999999 6765554432
Q ss_pred cceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec-CCeEEEEEcCcchhhhhccc-----cccccEE
Q 038568 116 DRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW-DRSFKIWNASNYKCLESVNK-----AHEDAVN 187 (357)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-----~~~~~v~ 187 (357)
.....+.++.+.+ +.+++.+. ++.|..+|. +++.+..+.. .+.....
T Consensus 74 ------------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 74 ------------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp ------------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCS
T ss_pred ------------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccccc
Confidence 1123567778887 67777776 778888885 5666655521 1112344
Q ss_pred EEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccC
Q 038568 188 AVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERD 266 (357)
Q Consensus 188 ~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 266 (357)
.++..+++ ++++...++.|..||.. .+.+..+... ..+.++.+.+++++++++..++.|..+|..++
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-----------G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-----------GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-----------SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-----------CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 56678888 57888889999999975 3344444433 34567788899999999988889999999988
Q ss_pred Cceeeee
Q 038568 267 HRMVFAE 273 (357)
Q Consensus 267 ~~~~~~~ 273 (357)
+.+....
T Consensus 197 ~~~w~~~ 203 (276)
T 3no2_A 197 RIVRRVN 203 (276)
T ss_dssp CEEEEEE
T ss_pred cEEEEec
Confidence 8654443
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=7.6e-12 Score=109.74 Aligned_cols=299 Identities=11% Similarity=0.048 Sum_probs=180.7
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccC--CccccceeccccCCCCceEEEEEe----
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLIS--DYSHVDTFSNDLSSSGSVKSITFH---- 81 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~--~~~~~~~~~~~~~~~~~v~~l~~~---- 81 (357)
..+.+.+.++. ....+..+.|+ |+++++++.+ .|.+||+ . +.+.+..+. .......++|+
T Consensus 184 ~~t~~v~~~i~------~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~-~~~t~~~v~~i~----~G~~P~~ia~s~~~~ 252 (567)
T 1qks_A 184 GSTYEIKTVLD------TGYAVHISRLSASGRYLFVIGRDGKVNMIDL-WMKEPTTVAEIK----IGSEARSIETSKMEG 252 (567)
T ss_dssp TTTCCEEEEEE------CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSSSCCEEEEEE----CCSEEEEEEECCSTT
T ss_pred CCCCeEEEEEe------CCCCccceEECCCCCEEEEEcCCCeEEEEEC-CCCCCcEeEEEe----cCCCCceeEEccccC
Confidence 34456666666 33456789999 8999999999 9999999 5 677777776 34456799999
Q ss_pred cCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccc-cEEEEEEec---Ce
Q 038568 82 ITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWD-AVSDLVVKQ---GL 154 (357)
Q Consensus 82 ~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~---~~ 154 (357)
|++ +++...++++.++|..+.+....+.......+ ....|.. .+..+..++ ..
T Consensus 253 pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~--------------------~~~~~p~~rva~i~~s~~~~~~ 312 (567)
T 1qks_A 253 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYD--------------------EQEYHPEPRVAAILASHYRPEF 312 (567)
T ss_dssp CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTT--------------------TCCEESCCCEEEEEECSSSSEE
T ss_pred CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccc--------------------cccccCCCceEEEEEcCCCCEE
Confidence 576 44555679999999988776655543210000 0001222 566677666 45
Q ss_pred EEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-E-EEEeCCCeEEEEEccccccccccccceeeeeEee-
Q 038568 155 MYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-V-YTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV- 231 (357)
Q Consensus 155 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~- 231 (357)
++....+|.|.++|....+.+.............+.|+|+++ + ++...++.|.++|.. + .+....+.
T Consensus 313 vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~------t----~kl~~~i~v 382 (567)
T 1qks_A 313 IVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK------E----GKLVAIEDT 382 (567)
T ss_dssp EEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT------T----TEEEEEEEC
T ss_pred EEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECC------C----CcEEEEEec
Confidence 666677899999998765422221123345567889999994 4 455578999999997 2 22222222
Q ss_pred ----ccccceeEEEEecCCCEE-EEEe-cCCeEEEEecccCCc----eeeeeeccCCccceEEEeecC--ceEEEecC--
Q 038568 232 ----KHRSTVNALALNGDGSLL-FSGG-CDRWIVVWERERDHR----MVFAEALWGHTGALLCLINVG--DLLASGSA-- 297 (357)
Q Consensus 232 ----~~~~~v~~~~~~~~~~~l-~~~~-~dg~i~vwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~-- 297 (357)
.|.+.-..+ ++|++..+ +++. .++.|.++|..+.+. ...+..+......-..+..+| .++.+...
T Consensus 383 gg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~ 461 (567)
T 1qks_A 383 GGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN 461 (567)
T ss_dssp SSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTC
T ss_pred cCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCC
Confidence 232211112 57875544 4443 468999999987321 223344333222222233444 46666542
Q ss_pred -----CCeEEEeeCCCCcc---eeeeeeec--------CCcCceEEEEEeeCCCCCCCCeEEEEEc-C---CCCeEEecC
Q 038568 298 -----DRTVRIWQRGKENC---YRCMAFLE--------GHEKPVKSLVAISSSSSASNGIVSIGSG-S---LNGEIKVWD 357 (357)
Q Consensus 298 -----dg~i~vw~~~~~~~---~~~~~~~~--------~h~~~v~~~~~~~~~~~~~~~~~~l~s~-~---~dg~v~~wd 357 (357)
.+.|.++|+.+.+. .+.+..+. .-...+..+.|+|+++ ..++|. + .++.|.++|
T Consensus 462 ~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~------~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 462 PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGT------EVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSS------EEEEEEECCTTSCCEEEEEE
T ss_pred CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCC------EEEEEeecCCCCCCcEEEEE
Confidence 45899999987510 11112221 1245788999999997 344442 2 368888775
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=4.5e-11 Score=97.01 Aligned_cols=269 Identities=8% Similarity=-0.031 Sum_probs=168.6
Q ss_pred CccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEee-cCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAH-QDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~-~d~~i~vwd~~~~ 102 (357)
....+.+++++ |++.++...+ .|.+||. . ++.. .+... .....+.++++.+++ ++.+. .++.|..||.. +
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~-~-~~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQ-S-GRIK-EFEVP-TPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-SCEE-EEECS-STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECC-C-CceE-EEECC-CCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 34578899998 6666665566 9999998 5 3332 22211 144678999999877 44444 47889999987 4
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNK 180 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 180 (357)
+. ..+.. + .....+.++++.+ .++++...++.|..+|.. ++.......
T Consensus 93 ~~-~~~~~-~---------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 142 (300)
T 2qc5_A 93 GF-TEYPL-P---------------------------QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLP 142 (300)
T ss_dssp CE-EEEEC-S---------------------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECS
T ss_pred Ce-EEecC-C---------------------------CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCC
Confidence 32 21111 0 1235678888887 445555557899999987 443321112
Q ss_pred cccccEEEEEEecCCeEEEE-eCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEE
Q 038568 181 AHEDAVNAVVVSDNGVVYTG-SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIV 259 (357)
Q Consensus 181 ~~~~~v~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 259 (357)
.....+..+++.+++.+..+ ..++.|..+|.. . ... ..........+..++++++++++++...++.|.
T Consensus 143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~------g---~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 143 NKGSYPAFITLGSDNALWFTENQNNSIGRITNT------G---KLE-EYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp STTCCEEEEEECTTSSEEEEETTTTEEEEECTT------C---CEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CCCCCceeEEECCCCCEEEEecCCCeEEEECCC------C---cEE-EeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 23457889999999865544 447889999864 1 111 111223345688999999998777766778899
Q ss_pred EEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCC
Q 038568 260 VWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSA 337 (357)
Q Consensus 260 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 337 (357)
+||. ++... .. ....+...+.+++++++ +.++...++.|..|+.. ++ .. ...+......+.++++.+++.
T Consensus 213 ~~~~-~g~~~-~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~~-~~~~~~~~~~~~~i~~~~~g~-- 284 (300)
T 2qc5_A 213 RITT-TGEIS-EY-DIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NT-IQ-EYQLQTENAEPHGITFGKDGS-- 284 (300)
T ss_dssp EECT-TCCEE-EE-ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EE-EEECCSTTCCCCCEEECTTSC--
T ss_pred EEcC-CCcEE-EE-ECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-EE-EEECCccCCccceeEeCCCCC--
Confidence 9998 34322 11 22233455677777765 55555567899999984 32 12 222333445688999999987
Q ss_pred CCCeEEEEEcCCCCeEEec
Q 038568 338 SNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 338 ~~~~~~l~s~~~dg~v~~w 356 (357)
++++.. . .|..+
T Consensus 285 -----l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 285 -----VWFALK-C-KIGKL 296 (300)
T ss_dssp -----EEEECS-S-EEEEE
T ss_pred -----EEEEcc-C-ceEEe
Confidence 666655 4 55443
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=4.3e-13 Score=121.95 Aligned_cols=237 Identities=10% Similarity=0.017 Sum_probs=149.0
Q ss_pred CccceeEEEEe--cceEE-----EeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCe----
Q 038568 28 HHMIISCLAVH--NSLLY-----AASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCK---- 93 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~-----t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~---- 93 (357)
|...+.+++|| |++|| .|+.+ .|++||+ .+++.+..-.. .......++|+||+ |+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl-~tg~~~~~~~~---~~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV-DSGEWSKVDVI---EGGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEET-TTCCBCSSCCB---SCCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEEC-CCCCCcCCccc---CcccccceEEecCCCEEEEEEecCCCCCc
Confidence 66689999999 88888 56667 9999999 88776511111 11112689999997 888877765
Q ss_pred ---------EEEEecCCccce-eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC
Q 038568 94 ---------IRVWKITASRQH-QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD 161 (357)
Q Consensus 94 ---------i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d 161 (357)
|++|++.++... ..+...+ .+...+..+.|+| ++|+.++.+
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~---------------------------~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERT---------------------------GDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCC---------------------------CCTTCEEEEEECTTSCCEEEEEEE
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecC---------------------------CCCEEEEEEEECCCCCEEEEEEeC
Confidence 999999877532 1121111 4456788999999 677777666
Q ss_pred C----eEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeC----CCeEEEEEccccccccccccceeeeeEeecc
Q 038568 162 R----SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSA----DGRIRVWERSVVDHNKERKSRHMLVTTLVKH 233 (357)
Q Consensus 162 g----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 233 (357)
+ .|.+||..+++ ...+ ..+...+....+ +++.++..+. ++.|.+||+.. ... .....+..+
T Consensus 248 ~~~~~~l~~~~~~~~~-~~~l-~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~------~~~--~~~~~l~~~ 316 (695)
T 2bkl_A 248 GWSENDVYWKRPGEKD-FRLL-VKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK------PAR--ASWKEIVPE 316 (695)
T ss_dssp TTTEEEEEEECTTCSS-CEEE-EECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB------CSG--GGCEEEECC
T ss_pred CCCceEEEEEcCCCCc-eEEe-ecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC------CCc--cCCeEEecC
Confidence 5 67777665443 3334 334444555555 4443444433 58899999862 110 001222222
Q ss_pred --ccceeEEEEecCCCEEEEEecCCeEEEEecc-cCCceeeeeeccCC-ccceEEEeecCc--eEE----EecCCCeEEE
Q 038568 234 --RSTVNALALNGDGSLLFSGGCDRWIVVWERE-RDHRMVFAEALWGH-TGALLCLINVGD--LLA----SGSADRTVRI 303 (357)
Q Consensus 234 --~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~~-~~~v~~~~~~~~--~l~----~~~~dg~i~v 303 (357)
...+..++++ ++.++++...|+..++|.+. +++. ...+..+ ...+..++++++ .++ +....+.|++
T Consensus 317 ~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~---~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~ 392 (695)
T 2bkl_A 317 DSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKP---VRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYK 392 (695)
T ss_dssp CSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCE---EEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEE
T ss_pred CCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCe---eEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 4567888888 67788888999998888765 2332 2223333 556666776654 444 2334578999
Q ss_pred eeCCCCc
Q 038568 304 WQRGKEN 310 (357)
Q Consensus 304 w~~~~~~ 310 (357)
||+.+++
T Consensus 393 ~d~~~g~ 399 (695)
T 2bkl_A 393 TSVSTGK 399 (695)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9998764
No 195
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.58 E-value=3.2e-14 Score=120.47 Aligned_cols=244 Identities=8% Similarity=-0.048 Sum_probs=146.4
Q ss_pred EEEeccCCccccceeccccCCCC-----ceEEEEEecCc--eEEeec---CCeEEEEecCCccceeeeeecCccccceee
Q 038568 51 NVFDLISDYSHVDTFSNDLSSSG-----SVKSITFHITK--IFTAHQ---DCKIRVWKITASRQHQLVSTLPTVKDRLIR 120 (357)
Q Consensus 51 ~iw~~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~--l~~~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 120 (357)
...|. .+++.+..+.. +.. .+..++|+|++ |+.... +..|.+||+.+++......
T Consensus 13 ~~~d~-~~g~~~~~l~~---~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~----------- 77 (396)
T 3c5m_A 13 TFVDS-DTQVKVTRLTP---TDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE----------- 77 (396)
T ss_dssp EEECT-TTCCEEEECSC---TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-----------
T ss_pred eeecC-CCCcceEEEec---CCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-----------
Confidence 34466 66666666654 333 36788999997 555533 2368888988765322111
Q ss_pred eecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhccccccccEEE----------
Q 038568 121 SVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNA---------- 188 (357)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~---------- 188 (357)
.+......+.|+| +.|+.++.++.|.+||+.+++..... ..+......
T Consensus 78 -------------------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~ 137 (396)
T 3c5m_A 78 -------------------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIY-TVDEEWKGYGTWVANSDCT 137 (396)
T ss_dssp -------------------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEE-ECCTTEEEEEEEEECTTSS
T ss_pred -------------------CCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE-ecccccCCCCCEEEeccCC
Confidence 1112222367888 78888888999999999887654433 222222111
Q ss_pred ---------EEEecCCe-EEEE-----eCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec-CCCEEEEE
Q 038568 189 ---------VVVSDNGV-VYTG-----SADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG-DGSLLFSG 252 (357)
Q Consensus 189 ---------~~~~~~~~-l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~ 252 (357)
..++|++. ++.. ..+..|.+||+. . .+.. .+..+...+..+.|+| +++.|+..
T Consensus 138 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~------~----g~~~-~~~~~~~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 138 KLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE------T----GELE-VIHQDTAWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT------T----CCEE-EEEEESSCEEEEEEETTEEEEEEEE
T ss_pred ccccccccccccCCCCcceeeeeeccCCCcceEEEEECC------C----CcEE-eeccCCcccccceECCCCCCEEEEE
Confidence 24566663 3322 456789999987 2 1121 2224566788999999 78877766
Q ss_pred ecC------CeEEEEecccCCceeeeeeccCC--ccceEEEeecCc--eEEEecCC-----CeEEEeeCCCCcceeeeee
Q 038568 253 GCD------RWIVVWERERDHRMVFAEALWGH--TGALLCLINVGD--LLASGSAD-----RTVRIWQRGKENCYRCMAF 317 (357)
Q Consensus 253 ~~d------g~i~vwd~~~~~~~~~~~~~~~~--~~~v~~~~~~~~--~l~~~~~d-----g~i~vw~~~~~~~~~~~~~ 317 (357)
+.+ ..|.+||+..+... .+..+ ...+..+.|+++ +|+.++.+ +.|++||+.+++. ..+..
T Consensus 207 ~~~~~~~~~~~l~~~d~~~~~~~----~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~ 281 (396)
T 3c5m_A 207 HEGPHDLVDARMWLVNEDGSNVR----KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN-EEVMV 281 (396)
T ss_dssp ECSCSSSCSCCCEEEETTSCCCE----ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE-EEEEE
T ss_pred ecCCCCCCCceEEEEECCCCcee----EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe-EEeee
Confidence 543 36888888755422 11122 234666777765 56655443 4599999988742 22222
Q ss_pred ecCCcCceEEEEEee-CCCCCCCCeEEEEEcC----------------CCCeEEecC
Q 038568 318 LEGHEKPVKSLVAIS-SSSSASNGIVSIGSGS----------------LNGEIKVWD 357 (357)
Q Consensus 318 ~~~h~~~v~~~~~~~-~~~~~~~~~~~l~s~~----------------~dg~v~~wd 357 (357)
..+ .. +.|+| +++ ++++++ .++.|.+||
T Consensus 282 ~~~----~~-~~~s~~dg~-------~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 282 MPP----CS-HLMSNFDGS-------LMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp CCS----EE-EEEECSSSS-------EEEEEECCC----------CCCCCCEEEEEE
T ss_pred CCC----CC-CCccCCCCc-------eEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 222 23 88999 987 776643 346788875
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=1.5e-12 Score=118.66 Aligned_cols=238 Identities=7% Similarity=-0.003 Sum_probs=152.6
Q ss_pred CccceeEEEEe--cceEEEee-----CC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCe----
Q 038568 28 HHMIISCLAVH--NSLLYAAS-----LN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCK---- 93 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~-----~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~---- 93 (357)
|...+..++|| |++||.++ .. .|++||+ .+++...... ....+..++|+||+ |+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~-~tg~~~~~~~----~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKV-DGAKELPDVL----ERVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEET-TTTEEEEEEE----EEECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEEC-CCCCCCcccc----cCcccceEEEEeCCCEEEEEEECCccccc
Confidence 55578899999 88888653 23 7999999 8877665332 22236789999987 777777665
Q ss_pred ------------EEEEecCCcccee-eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEE
Q 038568 94 ------------IRVWKITASRQHQ-LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSV 158 (357)
Q Consensus 94 ------------i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~ 158 (357)
|.+|++.+++... .+.... .+...+..+.|+| ++|+.+
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~---------------------------~~~~~~~~~~~SpDg~~l~~~ 250 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFP---------------------------DEPKWMGGAELSDDGRYVLLS 250 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCT---------------------------TCTTCEEEEEECTTSCEEEEE
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccC---------------------------CCCeEEEEEEEcCCCCEEEEE
Confidence 9999998765321 111110 3455678899999 667766
Q ss_pred ec-----CCeEEEEEcCc------ch-hhhhccccccccEEEEEEecCC-eEEEEeC----CCeEEEEEccccccccccc
Q 038568 159 SW-----DRSFKIWNASN------YK-CLESVNKAHEDAVNAVVVSDNG-VVYTGSA----DGRIRVWERSVVDHNKERK 221 (357)
Q Consensus 159 ~~-----dg~i~iwd~~~------~~-~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~----d~~i~i~d~~~~~~~~~~~ 221 (357)
+. +..|.+||+.+ +. ....+ ..+...+.. .|++++ .|+..+. .+.|.+||+.. ..
T Consensus 251 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l-~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~------~~ 322 (710)
T 2xdw_A 251 IREGCDPVNRLWYCDLQQESNGITGILKWVKL-IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTD------PE 322 (710)
T ss_dssp EECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE-ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTS------CC
T ss_pred EEccCCCccEEEEEECcccccccCCccceEEe-eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCC------CC
Confidence 54 56899999976 43 34444 344444444 477777 4544443 34699999862 11
Q ss_pred cceeeeeEeecccc--ceeEEEEecCCCEEEEEecCCe--EEEEecccCCceeeeeeccCCccceEEEeecCc--eEE-E
Q 038568 222 SRHMLVTTLVKHRS--TVNALALNGDGSLLFSGGCDRW--IVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLA-S 294 (357)
Q Consensus 222 ~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~--i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~-~ 294 (357)
. .....+..+.. .+..++|++++.++++...|+. |.+|++.+++.. ..+..+.+.+..++++++ .++ +
T Consensus 323 ~--~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~---~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 323 E--SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALL---KIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp G--GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEE---EEECCCSSEEEEEECCTTCSEEEEE
T ss_pred c--ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEE---EecCCCCceEEEEecCCCCCEEEEE
Confidence 0 01223333433 6788999987788888888885 566676556532 334445677778877654 333 3
Q ss_pred ec---CCCeEEEeeCCCCc
Q 038568 295 GS---ADRTVRIWQRGKEN 310 (357)
Q Consensus 295 ~~---~dg~i~vw~~~~~~ 310 (357)
.+ ..+.|++||+.+++
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 22 35789999998764
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.55 E-value=4e-12 Score=116.37 Aligned_cols=268 Identities=11% Similarity=0.049 Sum_probs=157.5
Q ss_pred EecceEEEeeCC----ceEEEeccCC----cccccee-cc---ccCCCCceEEEEEecCc--eEEeecC-----CeEEEE
Q 038568 37 VHNSLLYAASLN----EINVFDLISD----YSHVDTF-SN---DLSSSGSVKSITFHITK--IFTAHQD-----CKIRVW 97 (357)
Q Consensus 37 ~s~~~l~t~~~d----~i~iw~~~~~----~~~~~~~-~~---~~~~~~~v~~l~~~~~~--l~~~~~d-----~~i~vw 97 (357)
..|++++-...+ .-.+|.. +. +.....+ .. ..++...+..++|+||+ |+.++.+ ..|++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVR-PADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEE-ETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEE-cCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 347777765533 3566665 31 2222222 11 00133478899999997 5554433 469999
Q ss_pred ecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCC--------------
Q 038568 98 KITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDR-------------- 162 (357)
Q Consensus 98 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg-------------- 162 (357)
|+.+++..... .+...+..++|+| +.|+.++.++
T Consensus 195 dl~tg~~~~~~-------------------------------~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~ 243 (741)
T 1yr2_A 195 GVADGKPLADE-------------------------------LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQ 243 (741)
T ss_dssp ETTTCCEEEEE-------------------------------EEEEESCCCEESTTSEEEEEECCCC--------CCCCC
T ss_pred ECCCCCCCCcc-------------------------------CCCceeccEEEECCCEEEEEEecCcccccccccCCCCC
Confidence 99988753321 1111234667777 5666666554
Q ss_pred eEEEEEcCcchhhh--hcc-ccccccEEEEEEecCC-eEEEEeCC-----CeEEEEEccccccccccccceeeeeEeecc
Q 038568 163 SFKIWNASNYKCLE--SVN-KAHEDAVNAVVVSDNG-VVYTGSAD-----GRIRVWERSVVDHNKERKSRHMLVTTLVKH 233 (357)
Q Consensus 163 ~i~iwd~~~~~~~~--~~~-~~~~~~v~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 233 (357)
.|++|++.+++... .+. ..+...+..+.|+||| +|+..+.+ ..|++||+. ... ......+..+
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~------~~~--~~~~~~l~~~ 315 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVT------NGK--IGPVTALIPD 315 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEE------TTE--ECCCEEEECS
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECC------CCC--CcccEEecCC
Confidence 38999998765321 121 1223358899999999 46555543 489999986 210 0102334444
Q ss_pred ccceeEEEEecCCCEEEEEec----CCeEEEEecccCC-ceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCC
Q 038568 234 RSTVNALALNGDGSLLFSGGC----DRWIVVWERERDH-RMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRG 307 (357)
Q Consensus 234 ~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~ 307 (357)
...+... ++|+|+.|+..+. ++.|.+||+.++. .. ...+..+...+..+++.++ ++++...|+..+||.+.
T Consensus 316 ~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 316 LKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF--DTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE--EEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEE
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc--EEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEe
Confidence 4444444 3488888887765 4459999998752 22 2222334445666777666 77888889988877665
Q ss_pred -CCcceeeeeeecC-CcCceEEEEEeeCCCCCCCCeEEEE----EcCCCCeEEecC
Q 038568 308 -KENCYRCMAFLEG-HEKPVKSLVAISSSSSASNGIVSIG----SGSLNGEIKVWD 357 (357)
Q Consensus 308 -~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~l~----s~~~dg~v~~wd 357 (357)
++ .....+.. +...|..+.++|+++ .|+ +....++|.+||
T Consensus 393 ~~g---~~~~~l~~~~~~~v~~~~~s~d~~-------~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 393 LDG---KPAGAVSLPGIGSASGLSGRPGDR-------HAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp TTS---CEEEECBCSSSCEEEEEECCBTCS-------CEEEEEEETTEEEEEEEEE
T ss_pred CCC---CceeeccCCCCeEEEEeecCCCCC-------EEEEEEcCCCCCCEEEEEE
Confidence 33 23344443 356788999999876 444 334456777775
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.55 E-value=2.9e-12 Score=106.44 Aligned_cols=215 Identities=8% Similarity=0.059 Sum_probs=135.7
Q ss_pred ceeEEEEe--cceEEEeeC-----C-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecC---------
Q 038568 31 IISCLAVH--NSLLYAASL-----N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQD--------- 91 (357)
Q Consensus 31 ~i~~~~~s--~~~l~t~~~-----d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d--------- 91 (357)
.+..++|+ |++||.++. . .|.+|++ .+++...... +.. +..++|+|++ |+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~-~~g~~~~l~~----~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADL-ETLSSKKILE----AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEET-TTTEEEEEEE----ESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEEC-CCCceEEEEc----CCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 46778999 888887763 3 5888998 7766555544 333 9999999987 6666532
Q ss_pred ------------------CeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-
Q 038568 92 ------------------CKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ- 152 (357)
Q Consensus 92 ------------------~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 152 (357)
..|.+||+.+++....+. . . .+..+.|+|
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~------------------------------~-~-~~~~~~~spd 181 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE------------------------------K-P-RFSSGIWHRD 181 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEE------------------------------E-E-TTCEEEEETT
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeec------------------------------C-C-CcccccCCCC
Confidence 568888887665322221 2 2 566778888
Q ss_pred CeEEEEecCC-------eEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCC--------CeEEEEEcccccc
Q 038568 153 GLMYSVSWDR-------SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSAD--------GRIRVWERSVVDH 216 (357)
Q Consensus 153 ~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d--------~~i~i~d~~~~~~ 216 (357)
.+++++..++ ...+|.+.+++ ...+ ..+ ..+..+ +|+| +|+.++.+ ..|.+|| .
T Consensus 182 g~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l-~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~---- 251 (347)
T 2gop_A 182 KIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKM-FEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-G---- 251 (347)
T ss_dssp EEEEEEECCCSSCCSSCCEEEEEEETTE-EEEE-EEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-S----
T ss_pred eEEEEEecccccccccccccEEEeCCCc-eEEe-ccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC-C----
Confidence 6444554432 33455444443 3333 223 444444 8998 46665543 3677777 3
Q ss_pred ccccccceeeeeEeeccccceeE-EEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEe
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNA-LALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASG 295 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 295 (357)
.........+...+.. +.|+ ++ ++++++.++.+++| +.+++. ..+..+...+.++++++.+++++
T Consensus 252 -------~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~----~~~~~~~~~v~~~~~s~~~~~~~ 317 (347)
T 2gop_A 252 -------KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI----KPIAKGRHWIMGFDVDEIVVYLK 317 (347)
T ss_dssp -------SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE----EEEECSSSEEEEEEESSSEEEEE
T ss_pred -------CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce----EEEecCCCeEEeeeeeCcEEEEE
Confidence 1122223345667776 8999 88 89999999999999 884432 22233467788888888655666
Q ss_pred cCCCeE-EEeeCC
Q 038568 296 SADRTV-RIWQRG 307 (357)
Q Consensus 296 ~~dg~i-~vw~~~ 307 (357)
+.++.. .+|.+.
T Consensus 318 ~~~~~~~~l~~~~ 330 (347)
T 2gop_A 318 ETATRLRELFTWD 330 (347)
T ss_dssp ECSSSCCEEEEES
T ss_pred cCCCChHHheEeC
Confidence 666654 777766
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.55 E-value=5.7e-11 Score=96.32 Aligned_cols=232 Identities=9% Similarity=0.007 Sum_probs=151.2
Q ss_pred CCCceEEEEEecCc-eEEeec-CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK-IFTAHQ-DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~-l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
+...+.++++.+++ +..+.. ++.|.+||.. ++. ..+.. + .....+.++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~-~---------------------------~~~~~~~~i 62 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPL-P---------------------------TPDAKVMCL 62 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEEC-S---------------------------STTCCEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecC-C---------------------------cccCceeeE
Confidence 45689999999987 555544 7899999987 432 22111 0 223568889
Q ss_pred EEec--CeEEEEecCCeEEEEEcCcchhhhhcc-ccccccEEEEEEecCCeEEE-EeCCCeEEEEEccccccccccccce
Q 038568 149 VVKQ--GLMYSVSWDRSFKIWNASNYKCLESVN-KAHEDAVNAVVVSDNGVVYT-GSADGRIRVWERSVVDHNKERKSRH 224 (357)
Q Consensus 149 ~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~ 224 (357)
++.+ .++++...++.|..||.. ++ ...+. ......+..+++.+++.+.. ...++.|..||.. . .
T Consensus 63 ~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~------g---~- 130 (299)
T 2z2n_A 63 TISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDD------G---K- 130 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT------C---C-
T ss_pred EECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCC------C---C-
Confidence 9988 444444457889999976 32 22221 12445788999999886544 4567899999863 0 1
Q ss_pred eeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEE
Q 038568 225 MLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVR 302 (357)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~ 302 (357)
............+..++++++++++++...++.|..||. +++.. .. ........+..++++++ ++++...++.|.
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 207 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT-EF-KIPTPASGPVGITKGNDDALWFVEIIGNKIG 207 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE-Ee-eCCCCCCcceeEEECCCCCEEEEccCCceEE
Confidence 111112223456889999999988877777889999998 55432 11 12233445667777654 555555678999
Q ss_pred EeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 303 IWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 303 vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+||. +++ ... .....+...+.++++++++. ++++...++.|..||
T Consensus 208 ~~~~-~g~-~~~-~~~~~~~~~~~~i~~~~~g~-------l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 208 RITT-SGE-ITE-FKIPTPNARPHAITAGAGID-------LWFTEWGANKIGRLT 252 (299)
T ss_dssp EECT-TCC-EEE-EECSSTTCCEEEEEECSTTC-------EEEEETTTTEEEEEE
T ss_pred EECC-CCc-EEE-EECCCCCCCceeEEECCCCC-------EEEeccCCceEEEEC
Confidence 9999 553 221 22334556789999999987 777766677787764
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=2.6e-11 Score=99.21 Aligned_cols=242 Identities=9% Similarity=0.049 Sum_probs=150.0
Q ss_pred cceeEEEEe--cceEEE-------eeCC-ceEEEeccCCccccceec-cccCCCCceEEEEEecC-c-eEEeecCCeEEE
Q 038568 30 MIISCLAVH--NSLLYA-------ASLN-EINVFDLISDYSHVDTFS-NDLSSSGSVKSITFHIT-K-IFTAHQDCKIRV 96 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t-------~~~d-~i~iw~~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~-~-l~~~~~d~~i~v 96 (357)
....+++|+ ++++++ +..+ .|.+||. .+++...... ...++...+.+++++++ + |+.++..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~-~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDL-KTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECT-TTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeC-CCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 346788998 666666 5667 9999998 6655432211 00014467899999998 6 666665568999
Q ss_pred EecCCccceee-eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC------------
Q 038568 97 WKITASRQHQL-VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD------------ 161 (357)
Q Consensus 97 wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d------------ 161 (357)
||.+ ++.... ..... ......+.++++.+ +++++...+
T Consensus 97 ~d~~-g~~~~~~~~~~~--------------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSE--------------------------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp EETT-SCEEECCSBCTT--------------------------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred EeCC-CCEEEEEeccCC--------------------------CccccCCcCEEECCCCCEEEEecCccccccccccccc
Confidence 9987 543221 11000 01224577889988 444444443
Q ss_pred ---CeEEEEEcCcchhhhhccccccccEEEEEEe----cCC-eEEEE-eCCCeEEEEEccccccccccccceeeeeEeec
Q 038568 162 ---RSFKIWNASNYKCLESVNKAHEDAVNAVVVS----DNG-VVYTG-SADGRIRVWERSVVDHNKERKSRHMLVTTLVK 232 (357)
Q Consensus 162 ---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 232 (357)
+.|..+|.. ++... + .........++++ |++ .++++ ..++.|.+||+.... ..........+..
T Consensus 150 ~~~~~l~~~~~~-g~~~~-~-~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g----~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 150 EKFGSIYCFTTD-GQMIQ-V-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA----KIENKKVWGHIPG 222 (314)
T ss_dssp SSCEEEEEECTT-SCEEE-E-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT----EEEEEEEEEECCC
T ss_pred CCCCeEEEECCC-CCEEE-e-ccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC----ccccceEEEECCC
Confidence 567777765 43322 2 2333456889999 998 45444 567899999975100 0001112223333
Q ss_pred cc-cceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCC
Q 038568 233 HR-STVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGK 308 (357)
Q Consensus 233 ~~-~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~ 308 (357)
+. ..+..++++++|+++++...++.|.+||.++++.... +..+...+.+++++++ ++++...++.|..|++..
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~---~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR---IRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE---EECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE---EeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 33 5678899999999888877888999999986653322 2334466778887654 444555678899999875
Q ss_pred C
Q 038568 309 E 309 (357)
Q Consensus 309 ~ 309 (357)
.
T Consensus 300 ~ 300 (314)
T 1pjx_A 300 N 300 (314)
T ss_dssp C
T ss_pred C
Confidence 3
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=1.2e-12 Score=108.41 Aligned_cols=168 Identities=12% Similarity=0.006 Sum_probs=121.4
Q ss_pred cEEEEEEec--CeEEEEecCCeEEEEEcCcchhh---------hhccccccccEEEEEEecCCeEEEEeCCCeEEEEEcc
Q 038568 144 AVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCL---------ESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERS 212 (357)
Q Consensus 144 ~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~ 212 (357)
+++.+++++ .++++|+.+ .+.+|++...+.. ......+.. |+.++| .+..|+++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-CCCEEEEE-cCCcEEEEEch
Confidence 688899998 888888887 4666998755411 111124556 999999 33367777 88999999997
Q ss_pred ccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceE
Q 038568 213 VVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLL 292 (357)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 292 (357)
.. . .......+..++.++.+.+. .+++++.||.|.+||+.++.... +...|.|++|+++-+
T Consensus 115 sl------~----~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG~ 175 (388)
T 1xip_A 115 EL------S----EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQL 175 (388)
T ss_dssp ST------T----CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSEE
T ss_pred hh------h----ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCce
Confidence 22 1 12233455667887777654 38889999999999999776321 345799999999988
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeee------c---CCcCceEEEEEeeCCC
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFL------E---GHEKPVKSLVAISSSS 335 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~ 335 (357)
+.|..||.+++|+....+.. ....+ . +|...|.+|.|.++..
T Consensus 176 ~vg~~dg~i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 176 AVLLKDRSFQSFAWRNGEME-KQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEETTSCEEEEEEETTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred EEEEcCCcEEEEcCCCcccc-ccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 99999999999988775310 02233 2 4778999999999876
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=3.5e-11 Score=98.39 Aligned_cols=239 Identities=8% Similarity=0.043 Sum_probs=147.8
Q ss_pred CCCceEEEEEecCc-eEEe--------ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccc
Q 038568 71 SSGSVKSITFHITK-IFTA--------HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEH 141 (357)
Q Consensus 71 ~~~~v~~l~~~~~~-l~~~--------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (357)
.-....+++|.+++ ++.+ ..++.|.+||..+++.... .. +. ..++
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~-~~------------------------~~~~ 69 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI-CK-PE------------------------VNGY 69 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE-EC-CE------------------------ETTE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE-Ee-cc------------------------cCCC
Confidence 34456899999877 4444 6788999999877654221 10 00 0024
Q ss_pred cccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhh-cc---ccccccEEEEEEecCCeEEEEeC-C-----------
Q 038568 142 WDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLES-VN---KAHEDAVNAVVVSDNGVVYTGSA-D----------- 203 (357)
Q Consensus 142 ~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~-~~---~~~~~~v~~~~~~~~~~l~~~~~-d----------- 203 (357)
...+.++++++ ..+..++..+.|.+||.. ++.... .. ......+.++++++++.+..+.. +
T Consensus 70 ~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 70 GGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp ECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 45688899987 466666666689999987 654322 21 11224578999999996554443 3
Q ss_pred ----CeEEEEEccccccccccccceeeeeEeeccccceeEEEEe----cCCCEEEEE-ecCCeEEEEeccc-CCc--eee
Q 038568 204 ----GRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALN----GDGSLLFSG-GCDRWIVVWERER-DHR--MVF 271 (357)
Q Consensus 204 ----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~vwd~~~-~~~--~~~ 271 (357)
+.|..||.. ... ..+..+......++++ |+++.|+.+ ..++.|.+||... +.. ...
T Consensus 149 ~~~~~~l~~~~~~-----------g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~ 216 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-----------GQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV 216 (314)
T ss_dssp SSSCEEEEEECTT-----------SCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE
T ss_pred cCCCCeEEEECCC-----------CCE-EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE
Confidence 456666543 111 1112233446789999 999765555 5678999999873 321 112
Q ss_pred eeeccCCc-cceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcC
Q 038568 272 AEALWGHT-GALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 272 ~~~~~~~~-~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~ 348 (357)
...+..+. .....++++++ ++++...++.|.+||..+++ .+..+..+...+.+++++|+++ .++++..
T Consensus 217 ~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~i~~~~dg~------~l~v~~~ 287 (314)
T 1pjx_A 217 WGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ---PKMRIRCPFEKPSNLHFKPQTK------TIFVTEH 287 (314)
T ss_dssp EEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS---CSEEEECSSSCEEEEEECTTSS------EEEEEET
T ss_pred EEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc---EeEEEeCCCCCceeEEECCCCC------EEEEEeC
Confidence 22333333 45666777655 66666678899999998653 3344455667899999999886 2344555
Q ss_pred CCCeEEecC
Q 038568 349 LNGEIKVWD 357 (357)
Q Consensus 349 ~dg~v~~wd 357 (357)
.++.|..||
T Consensus 288 ~~~~l~~~~ 296 (314)
T 1pjx_A 288 ENNAVWKFE 296 (314)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEe
Confidence 667777664
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.50 E-value=1.4e-10 Score=94.06 Aligned_cols=219 Identities=11% Similarity=0.043 Sum_probs=137.6
Q ss_pred CCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEE
Q 038568 71 SSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD 147 (357)
Q Consensus 71 ~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (357)
...-..+..|+++. +++...++.|..||..+++.. .+ .....+.+
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-------------------------------~~~~~~~~ 58 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-------------------------------TMDAPVSS 58 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-------------------------------ECSSCEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-------------------------------eCCCceEE
Confidence 33455688899853 566667889999999876531 11 22356889
Q ss_pred EEEec-CeEEEEecCCeEEEEEcCcchhhhhccc---cccccEEEEEEecCCeEEEEeC----------CCeEEEEEccc
Q 038568 148 LVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVNK---AHEDAVNAVVVSDNGVVYTGSA----------DGRIRVWERSV 213 (357)
Q Consensus 148 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~l~~~~~----------d~~i~i~d~~~ 213 (357)
+++.+ ..++.+. ++.|.+||.++++....... .....++.++++|+|.+..+.. ...-.+|.+..
T Consensus 59 i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 59 VALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp EEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred EEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 99998 4455555 56899999887654322101 1234578999999997555542 12345555431
Q ss_pred cccccccccceeeeeEeeccccceeEEEEecCCCEEE-EEecCCeEEEEecc--cCCce--eeeeeccCCccceEEEeec
Q 038568 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLF-SGGCDRWIVVWERE--RDHRM--VFAEALWGHTGALLCLINV 288 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~vwd~~--~~~~~--~~~~~~~~~~~~v~~~~~~ 288 (357)
.... ..+.......+.++|+|+++.|+ +.+.++.|.+|++. ++... ..+..+..+......++++
T Consensus 138 ---------~g~~-~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 138 ---------DHHV-KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp ---------TSCE-EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred ---------CCCE-EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 0111 11222334568899999998665 45567899999974 33311 1222222333455666766
Q ss_pred Cc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEe-eCCC
Q 038568 289 GD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAI-SSSS 335 (357)
Q Consensus 289 ~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~ 335 (357)
++ +.++...++.|..||..++ +.+..+..+...+++++|. |+++
T Consensus 208 ~~G~lwva~~~~~~v~~~d~~tG---~~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 208 AEGKLWVACYNGGRVIRLDPVTG---KRLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp TTSCEEEEEETTTEEEEECTTTC---CEEEEEECSSSBEEEEEEESGGGC
T ss_pred CCCCEEEEEcCCCEEEEEcCCCc---eEEEEEECCCCCceEEEEeCCCCC
Confidence 54 5566666788999999877 4555666666789999998 7765
No 204
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.49 E-value=4.9e-11 Score=100.24 Aligned_cols=267 Identities=9% Similarity=0.034 Sum_probs=161.9
Q ss_pred EEEecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCc
Q 038568 35 LAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPT 113 (357)
Q Consensus 35 ~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 113 (357)
+...+..+++++.+ .|..+|. ++++.+..... ............+.++.++.++.|..+|..+++..........
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~-~tG~~~W~~~~---~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNT-SDGTVAWQTKV---AGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEET-TTCCEEEEEEC---SSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred ceEeCCEEEEEcCCCEEEEEEC-CCCCEEEEEeC---CCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 34447788888888 9999999 88887766653 2221122233445588888999999999998876544432110
Q ss_pred cccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhcccccccc--------
Q 038568 114 VKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEDA-------- 185 (357)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------- 185 (357)
.. ..... .........++.++.++.|..+|..+++.+..........
T Consensus 175 ~~---------------------~~~~~----~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~ 229 (376)
T 3q7m_A 175 SL---------------------SLRGE----SAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLS 229 (376)
T ss_dssp -------------------------CCC----CCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------
T ss_pred ce---------------------eecCC----CCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCccccccc
Confidence 00 00000 1112224678888889999999999988876652111100
Q ss_pred -EEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecc
Q 038568 186 -VNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE 264 (357)
Q Consensus 186 -v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 264 (357)
+.......++.+++++.++.+..+|.++ .+.+.... ......+.. ++..++.++.++.|..+|..
T Consensus 230 ~~~~~p~~~~~~v~~~~~~g~l~~~d~~t----------G~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~ 295 (376)
T 3q7m_A 230 DVDTTPVVVNGVVFALAYNGNLTALDLRS----------GQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTID 295 (376)
T ss_dssp CCCCCCEEETTEEEEECTTSCEEEEETTT----------CCEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETT
T ss_pred ccCCCcEEECCEEEEEecCcEEEEEECCC----------CcEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECC
Confidence 1111111256788888899999999872 22222222 122333433 35678888889999999999
Q ss_pred cCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEE
Q 038568 265 RDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSI 344 (357)
Q Consensus 265 ~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l 344 (357)
+++........ ...........++.|+.++.+|.|.++|..+++ .+.........+.......++ .|
T Consensus 296 tG~~~w~~~~~--~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~---~~~~~~~~~~~~~~~~~~~~~--------~l 362 (376)
T 3q7m_A 296 GGVTLWTQSDL--LHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGR---FVAQQKVDSSGFQTEPVAADG--------KL 362 (376)
T ss_dssp TCCEEEEECTT--TTSCCCCCEEETTEEEEECTTSEEEEEETTTCC---EEEEEECCTTCBCSCCEEETT--------EE
T ss_pred CCcEEEeeccc--CCCcccCCEEECCEEEEEeCCCeEEEEECCCCc---EEEEEecCCCcceeCCEEECC--------EE
Confidence 88754332211 112223333456788899999999999999984 333333322333322222343 67
Q ss_pred EEcCCCCeEEecC
Q 038568 345 GSGSLNGEIKVWD 357 (357)
Q Consensus 345 ~s~~~dg~v~~wd 357 (357)
+.++.||.|..||
T Consensus 363 ~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 363 LIQAKDGTVYSIT 375 (376)
T ss_dssp EEEBTTSCEEEEE
T ss_pred EEEeCCCEEEEEe
Confidence 7788899998875
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.47 E-value=2.8e-10 Score=92.27 Aligned_cols=221 Identities=11% Similarity=0.066 Sum_probs=138.3
Q ss_pred CccceeEEEEe---cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCc
Q 038568 28 HHMIISCLAVH---NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 28 h~~~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~ 102 (357)
+..--.+..|+ +.++++...+ .|..||. .+++. ..+. ....+.++++++++ |+.+. ++.|.+||..++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~-~~~~~-~~~~----~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g 83 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDS-FTKQV-QRVT----MDAPVSSVALRQSGGYVATI-GTKFCALNWKEQ 83 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEET-TTCCE-EEEE----CSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTT
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEEC-CCCcE-EEEe----CCCceEEEEECCCCCEEEEE-CCeEEEEECCCC
Confidence 33455677887 4566666677 9999999 66543 3444 56789999999987 66665 568999998876
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEe-cC---------CeEEEEEcCc
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVS-WD---------RSFKIWNASN 171 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~-~d---------g~i~iwd~~~ 171 (357)
+.......... .....+.++++.+ ..+..++ .+ ..-.+|.+..
T Consensus 84 ~~~~~~~~~~~--------------------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 84 SAVVLATVDND--------------------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp EEEEEEECCTT--------------------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred cEEEEEecCCC--------------------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC
Confidence 53322211100 1234578899988 4444443 21 2234554432
Q ss_pred chhhhhccccccccEEEEEEecCCe-E-EEEeCCCeEEEEEcccccccccccc-ceeeeeEeeccccceeEEEEecCCCE
Q 038568 172 YKCLESVNKAHEDAVNAVVVSDNGV-V-YTGSADGRIRVWERSVVDHNKERKS-RHMLVTTLVKHRSTVNALALNGDGSL 248 (357)
Q Consensus 172 ~~~~~~~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~ 248 (357)
...+..+ .......+.++|+|++. | ++.+.++.|.+||+... .+.. ..+....+..+......++++++|++
T Consensus 138 ~g~~~~~-~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~----~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l 212 (297)
T 3g4e_A 138 DHHVKKY-FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ----TGQISNRRSVYKLEKEEQIPDGMCIDAEGKL 212 (297)
T ss_dssp TSCEEEE-EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTT----TCCEEEEEEEEECCGGGCEEEEEEEBTTSCE
T ss_pred CCCEEEE-eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCC----CCcccCcEEEEECCCCCCCCCeeEECCCCCE
Confidence 2222222 23344568899999984 4 55666889999987310 1110 11222333334466789999999988
Q ss_pred EEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC
Q 038568 249 LFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG 289 (357)
Q Consensus 249 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 289 (357)
.++...++.|.+||..+++... .+..+...+.+++|.+
T Consensus 213 wva~~~~~~v~~~d~~tG~~~~---~i~~p~~~~t~~~f~g 250 (297)
T 3g4e_A 213 WVACYNGGRVIRLDPVTGKRLQ---TVKLPVDKTTSCCFGG 250 (297)
T ss_dssp EEEEETTTEEEEECTTTCCEEE---EEECSSSBEEEEEEES
T ss_pred EEEEcCCCEEEEEcCCCceEEE---EEECCCCCceEEEEeC
Confidence 8877778899999998777443 3333456688889873
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.47 E-value=4.9e-10 Score=90.85 Aligned_cols=232 Identities=12% Similarity=0.024 Sum_probs=148.6
Q ss_pred CCCceEEEEEecCc-eEEee-cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK-IFTAH-QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~-l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
....+.++++.+++ +..+. .++.|.+||.. ++... +. .+ .....+.++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~-~~---------------------------~~~~~~~~i 67 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FE-VP---------------------------TPDAKVMCL 67 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EE-CS---------------------------STTCCEEEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EE-CC---------------------------CCCCcceeE
Confidence 45678899999887 44444 57899999987 43221 11 11 223567888
Q ss_pred EEec-C-eEEEEecCCeEEEEEcCcchhhhhcc-ccccccEEEEEEecCCeEEE-EeCCCeEEEEEccccccccccccce
Q 038568 149 VVKQ-G-LMYSVSWDRSFKIWNASNYKCLESVN-KAHEDAVNAVVVSDNGVVYT-GSADGRIRVWERSVVDHNKERKSRH 224 (357)
Q Consensus 149 ~~~~-~-~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~ 224 (357)
++.+ . +.++...++.|..+|.. ++.. .+. ......+..+++.+++.+.. ...++.|..+|.. . ..
T Consensus 68 ~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g--------~~ 136 (300)
T 2qc5_A 68 IVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G--------TI 136 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S--------CE
T ss_pred EECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-C--------CE
Confidence 8888 4 44444447889999987 4432 221 22346788999999886544 4447889999864 1 11
Q ss_pred eeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCeEE
Q 038568 225 MLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRTVR 302 (357)
Q Consensus 225 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~ 302 (357)
. ...+......+..++++++++++++...++.|..+|. +++.. .. ....+...+..+.++++ +.++....+.|.
T Consensus 137 ~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 137 Y-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE-EY-PLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp E-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred E-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE-Ee-eCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 1 1112223456889999999997766666888999998 44422 11 22233445677777655 555555677899
Q ss_pred EeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 303 IWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 303 vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+|+. +++ .. ......+...+.++++.+++. +.++...++.|..||
T Consensus 213 ~~~~-~g~-~~-~~~~~~~~~~~~~i~~d~~g~-------l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 213 RITT-TGE-IS-EYDIPTPNARPHAITAGKNSE-------IWFTEWGANQIGRIT 257 (300)
T ss_dssp EECT-TCC-EE-EEECSSTTCCEEEEEECSTTC-------EEEEETTTTEEEEEC
T ss_pred EEcC-CCc-EE-EEECCCCCCCceEEEECCCCC-------EEEeccCCCeEEEEC
Confidence 9998 332 11 122333456789999999987 777766677887765
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.42 E-value=5.6e-10 Score=91.69 Aligned_cols=211 Identities=12% Similarity=0.043 Sum_probs=129.8
Q ss_pred eEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe
Q 038568 75 VKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151 (357)
Q Consensus 75 v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 151 (357)
.....|+|+. +++...++.|..||..+++.. .+ .....+.++.+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-------------------------------~~~~~v~~i~~~ 98 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VH-------------------------------ALPFMGSALAKI 98 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EE-------------------------------ECSSCEEEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EE-------------------------------ECCCcceEEEEe
Confidence 4567899863 666667889999998876432 11 122468889998
Q ss_pred c-CeEEEEecCCeEEEEEcCcchhhhhccc---cccccEEEEEEecCCeEEEEeC-------CCeEEEEEcccccccccc
Q 038568 152 Q-GLMYSVSWDRSFKIWNASNYKCLESVNK---AHEDAVNAVVVSDNGVVYTGSA-------DGRIRVWERSVVDHNKER 220 (357)
Q Consensus 152 ~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~ 220 (357)
+ ..++.++.+ .|.+||..+++....... .....+..++++|+|.+..+.. .+.|..++ .
T Consensus 99 ~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~-------- 168 (326)
T 2ghs_A 99 SDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K-------- 168 (326)
T ss_dssp ETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T--------
T ss_pred CCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C--------
Confidence 8 555555544 499999887764322111 1124688999999997555543 23444444 2
Q ss_pred ccceeeeeEeeccccceeEEEEecCCCEEEEE-ecCCeEEEEecc--cC-Cc--eeeeeeccCCccceEEEeecCc--eE
Q 038568 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERE--RD-HR--MVFAEALWGHTGALLCLINVGD--LL 292 (357)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~--~~-~~--~~~~~~~~~~~~~v~~~~~~~~--~l 292 (357)
.+. ..+.........++|+|+++.|+.+ +.++.|.+||+. ++ .. ...+..+.........+.++++ +.
T Consensus 169 ---g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lw 244 (326)
T 2ghs_A 169 ---GKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIW 244 (326)
T ss_dssp ---TEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEE
T ss_pred ---CcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEE
Confidence 011 1111223346789999999876555 457899999986 44 21 1122222223344566666654 55
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEe-eCCC
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAI-SSSS 335 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~ 335 (357)
++...++.|.+|+.. + +.+..+..+...+++++|. +++.
T Consensus 245 va~~~~~~v~~~d~~-g---~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 245 NARWGEGAVDRYDTD-G---NHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp EEEETTTEEEEECTT-C---CEEEEEECSCSBEEEEEEESTTSC
T ss_pred EEEeCCCEEEEECCC-C---CEEEEEECCCCCcEEEEEecCCCC
Confidence 555556789999984 4 3345555566679999998 7765
No 208
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.42 E-value=3.1e-10 Score=95.35 Aligned_cols=259 Identities=12% Similarity=0.098 Sum_probs=157.4
Q ss_pred ecceEEEeeCC-ceEEEeccCCccccceeccccCC------CCce-EEEEEecCceEEeecCCeEEEEecCCccceeeee
Q 038568 38 HNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSS------SGSV-KSITFHITKIFTAHQDCKIRVWKITASRQHQLVS 109 (357)
Q Consensus 38 s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~------~~~v-~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 109 (357)
.+..+++++.+ .|..+|. ++++.+..+...... ...+ .......+.++.++.++.|..+|..+++..-...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~-~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNA-DDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEET-TTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEc-cCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 47788888888 9999999 888877665531100 2233 3344445558889999999999999887654332
Q ss_pred ecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhccccccccE---
Q 038568 110 TLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAV--- 186 (357)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v--- 186 (357)
... ............++.++.++.|..+|.++++.+..+. .. ..+
T Consensus 131 ~~~------------------------------~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~-~~-~~~~~~ 178 (376)
T 3q7m_A 131 VAG------------------------------EALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVN-LD-MPSLSL 178 (376)
T ss_dssp CSS------------------------------CCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE-CC-C-----
T ss_pred CCC------------------------------ceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEe-CC-CCceee
Confidence 211 0011112234778888899999999999998877662 21 111
Q ss_pred ---EEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccc--c-----ceeEEEEec--CCCEEEEEec
Q 038568 187 ---NAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHR--S-----TVNALALNG--DGSLLFSGGC 254 (357)
Q Consensus 187 ---~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~-----~v~~~~~~~--~~~~l~~~~~ 254 (357)
..... .++.++++..++.+..+|..+. +.+....... . .+..+...| .+..++.++.
T Consensus 179 ~~~~~~~~-~~~~v~~g~~~g~l~~~d~~tG----------~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~ 247 (376)
T 3q7m_A 179 RGESAPTT-AFGAAVVGGDNGRVSAVLMEQG----------QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY 247 (376)
T ss_dssp CCCCCCEE-ETTEEEECCTTTEEEEEETTTC----------CEEEEEECCC-----------CCCCCCEEETTEEEEECT
T ss_pred cCCCCcEE-ECCEEEEEcCCCEEEEEECCCC----------cEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec
Confidence 11222 2567888888999999998722 2222211110 0 000000111 2457888888
Q ss_pred CCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeeec-CCcCceEEEEEeeC
Q 038568 255 DRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLE-GHEKPVKSLVAISS 333 (357)
Q Consensus 255 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~ 333 (357)
++.+..+|.++++...... ......+...++.++.++.++.|..+|..+++ .+.... .....+......
T Consensus 248 ~g~l~~~d~~tG~~~w~~~-----~~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~---~~w~~~~~~~~~~~~~~~~-- 317 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKRE-----LGSVNDFIVDGNRIYLVDQNDRVMALTIDGGV---TLWTQSDLLHRLLTSPVLY-- 317 (376)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCCEEEEEEETTEEEEEETTCCEEEEETTTCC---EEEEECTTTTSCCCCCEEE--
T ss_pred CcEEEEEECCCCcEEeecc-----CCCCCCceEECCEEEEEcCCCeEEEEECCCCc---EEEeecccCCCcccCCEEE--
Confidence 9999999999887543221 12244556667788888889999999999884 232222 112222223222
Q ss_pred CCCCCCCeEEEEEcCCCCeEEecC
Q 038568 334 SSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 334 ~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+. .|+.++.+|.|.++|
T Consensus 318 ~~-------~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 318 NG-------NLVVGDSEGYLHWIN 334 (376)
T ss_dssp TT-------EEEEECTTSEEEEEE
T ss_pred CC-------EEEEEeCCCeEEEEE
Confidence 23 677777888888765
No 209
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.41 E-value=3.6e-10 Score=95.65 Aligned_cols=233 Identities=8% Similarity=0.047 Sum_probs=142.8
Q ss_pred cceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCC--eEEEEecCCc
Q 038568 30 MIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDC--KIRVWKITAS 102 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~--~i~vwd~~~~ 102 (357)
.....|+++ ++++++...+ .|++||. ++++....... ..... ++|++++ |+++..++ .|.+++...+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~-~~g~~~~~~~~----~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISV-DDNKVTTVHPG----FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEET-TTTEEEEEEET----CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEEC-CCCEEEEeecc----CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 357889998 6766666667 9999999 76555444432 22333 8999986 77777655 7888887655
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhh--c
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLES--V 178 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~--~ 178 (357)
.....+.... ........+++++| ..|+.+..++.|..||..++..... .
T Consensus 205 ~~~~~~g~~~--------------------------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~ 258 (409)
T 3hrp_A 205 WAPTRIGQLG--------------------------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQL 258 (409)
T ss_dssp TCEEEEEECC--------------------------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEEC
T ss_pred ceeEEeeecc--------------------------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecc
Confidence 4322221110 01334567788888 6677777789999999886653221 0
Q ss_pred -ccccccc--EEEEEEecC-Ce-EEEEeCCCeEEEEEccccccccccccceeeeeEeecc---------------cccee
Q 038568 179 -NKAHEDA--VNAVVVSDN-GV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKH---------------RSTVN 238 (357)
Q Consensus 179 -~~~~~~~--v~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~ 238 (357)
....... ...++++|+ +. +++-..++.|+.|+... . ...+.++ -....
T Consensus 259 ~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-----------~-~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 259 ELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-----------E-CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp CCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC-----------C-EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred cccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC-----------C-EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 0111111 138999994 65 55556788999998751 0 1111111 13478
Q ss_pred EEEEecCCCEEEEEe-cCCeEEEEecccCCceeeeeec--cC---------CccceEEEeecCc--eEEEecCCCeEEEe
Q 038568 239 ALALNGDGSLLFSGG-CDRWIVVWERERDHRMVFAEAL--WG---------HTGALLCLINVGD--LLASGSADRTVRIW 304 (357)
Q Consensus 239 ~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~--~~---------~~~~v~~~~~~~~--~l~~~~~dg~i~vw 304 (357)
.++++|+|+++++-. .++.|+.|++.++......... .+ .-.....++++++ ++++-..++.|+.+
T Consensus 327 gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 327 GMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp EEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred EEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 999999999777777 7899999997666422111110 00 0123456666653 55555666777766
Q ss_pred eC
Q 038568 305 QR 306 (357)
Q Consensus 305 ~~ 306 (357)
++
T Consensus 407 ~~ 408 (409)
T 3hrp_A 407 AV 408 (409)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=4.8e-10 Score=94.91 Aligned_cols=232 Identities=9% Similarity=0.055 Sum_probs=145.1
Q ss_pred CceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE
Q 038568 73 GSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150 (357)
Q Consensus 73 ~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 150 (357)
.....|+|++++ +++...++.|++||..++........ ..... ++|
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-------------------------------~~~~~-ia~ 178 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-------------------------------FKGGK-PAV 178 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-------------------------------CCBCB-CEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-------------------------------CCCCc-eeE
Confidence 467899999887 44555568999999987654332221 11122 778
Q ss_pred ec--CeEEEEecCC--eEEEEEcCcchhhhhcc--cc-ccccEEEEEEec-CCeEEEEeCCCeEEEEEcccccccccccc
Q 038568 151 KQ--GLMYSVSWDR--SFKIWNASNYKCLESVN--KA-HEDAVNAVVVSD-NGVVYTGSADGRIRVWERSVVDHNKERKS 222 (357)
Q Consensus 151 ~~--~~l~~~~~dg--~i~iwd~~~~~~~~~~~--~~-~~~~v~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 222 (357)
++ +.|+++..++ .|.+++...+.....+. .. ....+.+++++| ++.|+++..++.|+.||... ..
T Consensus 179 ~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~------~~- 251 (409)
T 3hrp_A 179 TKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKT------QE- 251 (409)
T ss_dssp CTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTT------CC-
T ss_pred ecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCC------CC-
Confidence 88 6777777765 78888876544322210 12 345678899999 67777777789999999861 11
Q ss_pred ceeeeeE--eeccccce--eEEEEecC-CCEEEEEecCCeEEEEecccCCceeeeeec--cC---------CccceEEEe
Q 038568 223 RHMLVTT--LVKHRSTV--NALALNGD-GSLLFSGGCDRWIVVWERERDHRMVFAEAL--WG---------HTGALLCLI 286 (357)
Q Consensus 223 ~~~~~~~--~~~~~~~v--~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~---------~~~~v~~~~ 286 (357)
...... ..+....- ..++|+|+ +.++++-..++.|+.|+..... ....... .+ .-.....++
T Consensus 252 -~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 252 -VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGEC-EWFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp -EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred -EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCE-EEEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 111100 11111222 38999995 5566666678899999986431 1111110 00 012356677
Q ss_pred ecCc--eEEEec-CCCeEEEeeCCCCcceeeeeeecCC---------------cCceEEEEEeeCCCCCCCCeEEEEEcC
Q 038568 287 NVGD--LLASGS-ADRTVRIWQRGKENCYRCMAFLEGH---------------EKPVKSLVAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 287 ~~~~--~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~~~~~~~l~s~~ 348 (357)
++++ ++++-. .++.|+.|++.++. +..+.++ -....++++++++. ++++-.
T Consensus 330 ~d~dG~lyvad~~~~~~I~~~~~~~G~----v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-------lyVad~ 398 (409)
T 3hrp_A 330 VDEDGNFYIVDGFKGYCLRKLDILDGY----VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-------YWIAEA 398 (409)
T ss_dssp ECTTCCEEEEETTTTCEEEEEETTTTE----EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-------EEEEES
T ss_pred EeCCCCEEEEeCCCCCEEEEEECCCCE----EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-------EEEEEC
Confidence 7655 666666 78999999977663 2222222 24588999999986 888888
Q ss_pred CCCeEEec
Q 038568 349 LNGEIKVW 356 (357)
Q Consensus 349 ~dg~v~~w 356 (357)
.++.|+.+
T Consensus 399 ~n~~Ir~i 406 (409)
T 3hrp_A 399 WGKAIRKY 406 (409)
T ss_dssp TTCEEEEE
T ss_pred CCCeEEEE
Confidence 88888765
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=6.4e-10 Score=101.87 Aligned_cols=237 Identities=11% Similarity=0.008 Sum_probs=143.8
Q ss_pred CccceeEEEEe--cceEEEeeC----C--ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCe-----
Q 038568 28 HHMIISCLAVH--NSLLYAASL----N--EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCK----- 93 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~----d--~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~----- 93 (357)
|...+..++|| |++||.++. + .|++||+ ++++.+.... +...+..++|+||. |+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl-~tg~~~~~~~----~~~~~~~~~wspD~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGV-ADGKPLADEL----KWVKFSGLAWLGNDALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEET-TTCCEEEEEE----EEEESCCCEESTTSEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEEC-CCCCCCCccC----CCceeccEEEECCCEEEEEEecCcccccc
Confidence 44578899999 888887653 2 6999999 8877654311 22234578999986 766665543
Q ss_pred ---------EEEEecCCcccee-eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecC
Q 038568 94 ---------IRVWKITASRQHQ-LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWD 161 (357)
Q Consensus 94 ---------i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d 161 (357)
|.+|++.++.... .+... ..+...+..+.|+| ++|+..+.+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~---------------------------~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFAT---------------------------PELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECC---------------------------TTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred cccCCCCCEEEEEECCCCchhCEEEecc---------------------------CCCCeEEEEEEECCCCCEEEEEEEc
Confidence 8888887654211 11111 02334578899999 667766654
Q ss_pred C-----eEEEEEcCcc--hhhhhccccccccEEEEEEecCC-eEEEEeC----CCeEEEEEccccccccccccceeeeeE
Q 038568 162 R-----SFKIWNASNY--KCLESVNKAHEDAVNAVVVSDNG-VVYTGSA----DGRIRVWERSVVDHNKERKSRHMLVTT 229 (357)
Q Consensus 162 g-----~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~ 229 (357)
+ .|.+||+.++ ++...+ ..+........ +|++ .|+..+. ++.|.+||+. ... ......
T Consensus 289 ~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~------~~~--~~~~~l 358 (741)
T 1yr2_A 289 GTDPVNTVHVARVTNGKIGPVTAL-IPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLS------GST--PRFDTV 358 (741)
T ss_dssp TTCSCCEEEEEEEETTEECCCEEE-ECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECS------SSS--CEEEEE
T ss_pred cCCCcceEEEEECCCCCCcccEEe-cCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCC------CCc--cccEEE
Confidence 3 8999999876 313444 23333344443 3666 5655554 4569999986 110 122223
Q ss_pred eeccccceeEEEEecCCCEEEEEecCCeEEEEecc-cCCceeeeeeccC-CccceEEEeecCc--eEE----EecCCCeE
Q 038568 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE-RDHRMVFAEALWG-HTGALLCLINVGD--LLA----SGSADRTV 301 (357)
Q Consensus 230 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-~~~~~~~~~~~~~-~~~~v~~~~~~~~--~l~----~~~~dg~i 301 (357)
+..+...+..++++ ++.++++...|+..++|.+. ++.. ...+.. +...+..++++++ .|+ +....+.|
T Consensus 359 ~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~---~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 434 (741)
T 1yr2_A 359 VPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKP---AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATV 434 (741)
T ss_dssp ECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCE---EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEE
T ss_pred ecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCc---eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEE
Confidence 33444556677887 56678888889987777665 2332 222322 3566777777654 333 23345899
Q ss_pred EEeeCCCCc
Q 038568 302 RIWQRGKEN 310 (357)
Q Consensus 302 ~vw~~~~~~ 310 (357)
++||+.+++
T Consensus 435 ~~~d~~tg~ 443 (741)
T 1yr2_A 435 LALDPATAK 443 (741)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 999998763
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=6.3e-10 Score=91.86 Aligned_cols=269 Identities=8% Similarity=-0.033 Sum_probs=161.4
Q ss_pred cceEEEeeC-----C-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee----------cCCeEEEEecC
Q 038568 39 NSLLYAASL-----N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH----------QDCKIRVWKIT 100 (357)
Q Consensus 39 ~~~l~t~~~-----d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~----------~d~~i~vwd~~ 100 (357)
++.+++... + .|.+.|. .+++.+..+.. ...+ . ++++|++ ++.+. .++.|.+||..
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~-~t~~v~~~I~v---G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDG-EAGRVIGMIDG---GFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEET-TTTEEEEEEEE---CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCEEEEEcCcccCCCCEEEEEEC-CCCeEEEEEEC---CCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 555555543 6 9999999 99999998885 4445 4 9999997 55554 36789999999
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec--CCeEEEEEcCcchhhh
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW--DRSFKIWNASNYKCLE 176 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~--dg~i~iwd~~~~~~~~ 176 (357)
+.+....+........ .....-..+.++| ++++.+.. ++.|.++|+.+++.+.
T Consensus 118 t~~v~~~I~v~~g~r~-----------------------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 118 TLLPTADIELPDAPRF-----------------------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp TCCEEEEEEETTCCCC-----------------------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred CCeEEEEEECCCcccc-----------------------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE
Confidence 9876665543210000 0012334678888 67777654 6899999999999888
Q ss_pred hccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeecccccee-EEEEe-cCCCEEEEE
Q 038568 177 SVNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN-ALALN-GDGSLLFSG 252 (357)
Q Consensus 177 ~~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~-~~~~~l~~~ 252 (357)
++.. ... .. ..|.+ .+++.+.||.+.+.++.... +........+.....++. ...|. ++|++++ .
T Consensus 175 tI~v--~g~--~~-~~P~g~~~~~~~~~DG~~~~v~~~~~g-----~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-v 243 (386)
T 3sjl_D 175 MLDV--PDC--YH-IFPTAPDTFFMHCRDGSLAKVAFGTEG-----TPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-P 243 (386)
T ss_dssp EEEC--CSE--EE-EEEEETTEEEEEETTSCEEEEECCSSS-----CCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-E
T ss_pred EEEC--CCc--ce-eecCCCceeEEECCCCCEEEEECCCCC-----eEEEeecceeccccccccccceeEcCCCcEEE-E
Confidence 8722 111 12 23433 57788889999999986211 100000001111112222 24665 5776555 5
Q ss_pred ecCCeEEEEecccCCceeeeeecc------------CCccceEEEeecCceEEEecC----------CCeEEEeeCCCCc
Q 038568 253 GCDRWIVVWERERDHRMVFAEALW------------GHTGALLCLINVGDLLASGSA----------DRTVRIWQRGKEN 310 (357)
Q Consensus 253 ~~dg~i~vwd~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~l~~~~~----------dg~i~vw~~~~~~ 310 (357)
+.+|+|++.|+.+.... ...... ........+...++.++.... .+.|.+.|+.+.+
T Consensus 244 s~~g~V~v~d~~~~~~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k 322 (386)
T 3sjl_D 244 TYTGKIHQIDLSSGDAK-FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE 322 (386)
T ss_dssp BTTSEEEEEECTTSSCE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred eCCCEEEEEECCCCcce-eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe
Confidence 56899999999765421 111110 111123444444444443321 3579999999974
Q ss_pred ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 311 CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 311 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+..+.. ...+.+|.+++|++. .++++...++.|.++|
T Consensus 323 ---v~~~i~v-g~~~~~lavs~D~~~-----~ly~tn~~~~~VsViD 360 (386)
T 3sjl_D 323 ---RLAKFEM-GHEIDSINVSQDEKP-----LLYALSTGDKTLYIHD 360 (386)
T ss_dssp ---EEEEEEE-EEEECEEEECSSSSC-----EEEEEETTTTEEEEEE
T ss_pred ---EEEEEEC-CCCcceEEECCCCCe-----EEEEEcCCCCeEEEEE
Confidence 4444432 236889999999740 1344456789998876
No 213
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=5.9e-10 Score=90.73 Aligned_cols=232 Identities=9% Similarity=0.047 Sum_probs=137.8
Q ss_pred ccceeccccCCCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccc
Q 038568 61 HVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRL 137 (357)
Q Consensus 61 ~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (357)
.+..+.. .........|+|++ +++...++.|..|+.. ++. ..+.
T Consensus 36 ~~~~l~~---~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~~---------------------------- 82 (305)
T 3dr2_A 36 RLLTLYD---QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVLL---------------------------- 82 (305)
T ss_dssp CCEEEEC---CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEEE----------------------------
T ss_pred ceEEEec---CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEEe----------------------------
Confidence 3444443 55667889999875 6677778999999874 332 2221
Q ss_pred cccccccEEEEEEec-CeEEEEe-cCCeEEEEEcCcchhhhhccc----cccccEEEEEEecCCeEEE-----EeC----
Q 038568 138 WLEHWDAVSDLVVKQ-GLMYSVS-WDRSFKIWNASNYKCLESVNK----AHEDAVNAVVVSDNGVVYT-----GSA---- 202 (357)
Q Consensus 138 ~~~~~~~v~~~~~~~-~~l~~~~-~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~~~~~~~~~l~~-----~~~---- 202 (357)
.+...+..+++++ ..++++. .++.|..|+.. ++. ..+.. .....+..+++.++|.+.. |..
T Consensus 83 --~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~ 158 (305)
T 3dr2_A 83 --DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQ 158 (305)
T ss_dssp --ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGG
T ss_pred --CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccc
Confidence 3345678899998 4455554 45789999975 442 22211 1123467899999996555 332
Q ss_pred ---------CCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC------CeEEEEecccCC
Q 038568 203 ---------DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD------RWIVVWERERDH 267 (357)
Q Consensus 203 ---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~ 267 (357)
.+.|..+|.. . .+... +. .......++|+|+++.|+.+... +.|++|++....
T Consensus 159 ~~~~~~~~~~~~v~~~d~~------~----g~~~~-~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 159 GCPADPELAHHSVYRLPPD------G----SPLQR-MA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SCCCCCSSSCEEEEEECSS------S----CCCEE-EE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred ccccccccCCCeEEEEcCC------C----CcEEE-Ee-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 2456667654 1 11111 11 23456789999999988777665 789999987543
Q ss_pred ceeeeeec-cCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEE
Q 038568 268 RMVFAEAL-WGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIG 345 (357)
Q Consensus 268 ~~~~~~~~-~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~ 345 (357)
+.....+ .........+.++++ .|.++..+| |.+|+.. + +.+..+..+. .+.+++|.++++ .|.
T Consensus 227 -l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~-g---~~~~~~~~~~-~~~~~~f~~d~~-------~L~ 292 (305)
T 3dr2_A 227 -LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDSD-G---QLLGHIPTPG-TASNCTFDQAQQ-------RLF 292 (305)
T ss_dssp -EEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECTT-S---CEEEEEECSS-CCCEEEECTTSC-------EEE
T ss_pred -ccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECCC-C---CEEEEEECCC-ceeEEEEeCCCC-------EEE
Confidence 2111111 111222233445444 355555554 9999985 3 3344444444 588999998876 666
Q ss_pred EcCCCCeEEe
Q 038568 346 SGSLNGEIKV 355 (357)
Q Consensus 346 s~~~dg~v~~ 355 (357)
.++.++..++
T Consensus 293 it~~~~l~~~ 302 (305)
T 3dr2_A 293 ITGGPCLWML 302 (305)
T ss_dssp EEETTEEEEE
T ss_pred EEcCCeEEEE
Confidence 6655665554
No 214
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.35 E-value=1.3e-10 Score=95.76 Aligned_cols=180 Identities=16% Similarity=0.102 Sum_probs=115.6
Q ss_pred EEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccc
Q 038568 145 VSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSR 223 (357)
Q Consensus 145 v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 223 (357)
+.++...+ ..+..++.++.|..+|.. ++.+..+ ......+.++...+++.+..++ +.|..+| . .
T Consensus 139 ~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~-~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~----------~ 203 (330)
T 3hxj_A 139 YATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRF-KTNDAITSAASIGKDGTIYFGS--DKVYAIN-P----------D 203 (330)
T ss_dssp CSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEE-ECSSCCCSCCEECTTCCEEEES--SSEEEEC-T----------T
T ss_pred eeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEE-ecCCCceeeeEEcCCCEEEEEe--CEEEEEC-C----------C
Confidence 44455564 678888888999999988 7766655 3344556777777788777777 8888888 4 1
Q ss_pred eeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeec-CceEEEecCCCeEE
Q 038568 224 HMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV-GDLLASGSADRTVR 302 (357)
Q Consensus 224 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~ 302 (357)
.............+.++...+++. |..++.++.|..+|.. +....... .....+..+..+ ...|..++.+|.|.
T Consensus 204 g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~-g~~~~~~~---~~~~~~~~~~~~~~g~l~v~t~~ggl~ 278 (330)
T 3hxj_A 204 GTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD-GTEKWRFK---TGKRIESSPVIGNTDTIYFGSYDGHLY 278 (330)
T ss_dssp SCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT-SCEEEEEE---CSSCCCSCCEECTTSCEEEECTTCEEE
T ss_pred CcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC-CCEeEEee---CCCCccccceEcCCCeEEEecCCCCEE
Confidence 222333333445677888888775 5556677888888753 44332222 122222333444 44788888898899
Q ss_pred EeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 303 IWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 303 vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
.+|. ++ +.+.........+.++...+++. |..++.+|.+++.
T Consensus 279 ~~d~-~g---~~~~~~~~~~~~~~~~~~d~~g~--------l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 279 AINP-DG---TEKWNFETGSWIIATPVIDENGT--------IYFGTRNGKFYAL 320 (330)
T ss_dssp EECT-TS---CEEEEEECSSCCCSCCEECTTCC--------EEEECTTSCEEEE
T ss_pred EECC-CC---cEEEEEEcCCccccceEEcCCCE--------EEEEcCCCeEEEE
Confidence 9996 44 22333333455677777777775 5667789988763
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=4.6e-09 Score=87.65 Aligned_cols=267 Identities=7% Similarity=-0.048 Sum_probs=158.3
Q ss_pred cceEEEeeC--C----ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee----------cCCeEEEEecC
Q 038568 39 NSLLYAASL--N----EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH----------QDCKIRVWKIT 100 (357)
Q Consensus 39 ~~~l~t~~~--d----~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~----------~d~~i~vwd~~ 100 (357)
+++++++.. . .|.++|. .+++.+..+.. ...+ .++++||+ ++.+. .++.|.+||..
T Consensus 32 ~~~~yv~~~~~~~~~~~v~v~D~-~t~~~~~~i~~---g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 32 GRRSYINLPAHHSAIIQQWVLDA-GSGSILGHVNG---GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCEEEEeCCcccCCccEEEEEEC-CCCeEEEEecC---CCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 555555443 2 5799999 88888877764 3334 99999997 55554 36789999998
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec--CCeEEEEEcCcchhhh
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW--DRSFKIWNASNYKCLE 176 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~--dg~i~iwd~~~~~~~~ 176 (357)
+.+....+...... +. .+...-..+.++| ++|+.+.. ++.|.++| .+++.+.
T Consensus 106 t~~~~~~i~~~~~~---------------------~~--~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~ 161 (373)
T 2mad_H 106 TFLPIADIELPDAP---------------------RF--DVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDD 161 (373)
T ss_pred CCcEEEEEECCCcc---------------------cc--ccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEe
Confidence 77655544321000 00 0012234788988 77777764 57899999 9998877
Q ss_pred h-ccccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccc-eeEEEEecCCCEEEEE
Q 038568 177 S-VNKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST-VNALALNGDGSLLFSG 252 (357)
Q Consensus 177 ~-~~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~ 252 (357)
. + . ... ++.+.|++ .+++.+.||.+.++|. ..+.... ......+ ....+ .....+.+++..++..
T Consensus 162 ~~i-~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~----~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~ 230 (373)
T 2mad_H 162 QLL-S-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGA----GLVGAML-TAAQNLLTQPAQANKSGRIVWP 230 (373)
T ss_pred EEc-C-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEE----Eeccccc-cCCcceeecceeEecCCEEEEE
Confidence 7 6 2 222 24445555 4677788999999997 3221100 0000001 11122 2335567766555544
Q ss_pred ecCCeEEEEecccCCceeeeeeccC----------CccceEEEeecC--ceEEEecC----------CCeEEEeeCCCCc
Q 038568 253 GCDRWIVVWERERDHRMVFAEALWG----------HTGALLCLINVG--DLLASGSA----------DRTVRIWQRGKEN 310 (357)
Q Consensus 253 ~~dg~i~vwd~~~~~~~~~~~~~~~----------~~~~v~~~~~~~--~~l~~~~~----------dg~i~vw~~~~~~ 310 (357)
+.++.+.+.|+...... ....+.- .......+.+++ +.+++... ++.|.++|..+.
T Consensus 231 ~~~~~v~vid~~~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~- 308 (373)
T 2mad_H 231 VYSGKILQADISAAGAT-NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG- 308 (373)
T ss_pred cCCceEEEEeccCCcce-EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC-
Confidence 57889999999754321 1111110 011122234444 44444332 468999999987
Q ss_pred ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcC-CCCeEEecC
Q 038568 311 CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGS-LNGEIKVWD 357 (357)
Q Consensus 311 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~-~dg~v~~wd 357 (357)
+.+..+.. .....+++|+||++ .+++++. .++.|.+||
T Consensus 309 --~vv~~i~~-g~~p~~i~~s~Dg~------~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 309 --QTSSQISL-GHDVDAISVAQDGG------PDLYALSAGTEVLHIYD 347 (373)
T ss_pred --EEEEEEEC-CCCcCeEEECCCCC------eEEEEEcCCCCeEEEEE
Confidence 44555543 33578999999986 3466665 589999886
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.34 E-value=2.2e-09 Score=88.63 Aligned_cols=267 Identities=12% Similarity=0.066 Sum_probs=161.5
Q ss_pred ccccceecccccCCCCCCCccceeEEEEe--cceEEEee----------CC-ceEEEeccCCccccceeccccC----CC
Q 038568 10 EAFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAAS----------LN-EINVFDLISDYSHVDTFSNDLS----SS 72 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~----------~d-~i~iw~~~~~~~~~~~~~~~~~----~~ 72 (357)
+..+.+.+.++.. -..+ . ++++ |++++++. .+ .|.+||. .+.+.+.++....+ ..
T Consensus 65 D~~t~~v~~~I~v-----G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~-~t~~v~~~I~v~~g~r~~~g 136 (386)
T 3sjl_D 65 DGEAGRVIGMIDG-----GFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP-VTLLPTADIELPDAPRFLVG 136 (386)
T ss_dssp ETTTTEEEEEEEE-----CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT-TTCCEEEEEEETTCCCCCBS
T ss_pred ECCCCeEEEEEEC-----CCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC-CCCeEEEEEECCCccccccC
Confidence 3345666666664 2233 3 8888 88887775 35 8999999 88888888753110 01
Q ss_pred CceEEEEEecCc--eEEeec--CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 73 GSVKSITFHITK--IFTAHQ--DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 73 ~~v~~l~~~~~~--l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
.....++|+||+ ++.+.. ++.|.++|+.+.+....+... + . ..
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~----------------------------g----~-~~ 183 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP----------------------------D----C-YH 183 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC----------------------------S----E-EE
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC----------------------------C----c-ce
Confidence 245679999997 555543 689999999998776655321 1 1 11
Q ss_pred EEec--CeEEEEecCCeEEEEEcCc-chhhhhc---cccccccEE-EEEEe-cCCeEEEEeCCCeEEEEEcccccccccc
Q 038568 149 VVKQ--GLMYSVSWDRSFKIWNASN-YKCLESV---NKAHEDAVN-AVVVS-DNGVVYTGSADGRIRVWERSVVDHNKER 220 (357)
Q Consensus 149 ~~~~--~~l~~~~~dg~i~iwd~~~-~~~~~~~---~~~~~~~v~-~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 220 (357)
.+.. ..+++.+.||.+.+.++.+ ++..... ......++. ...|. ++|+++..+.+|.|++.|+....
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~----- 258 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGD----- 258 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSS-----
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCc-----
Confidence 1211 6677888899999999876 4442211 011112221 23554 67876667778999999986211
Q ss_pred ccceeeeeEee----------ccccceeEEEEecCCCEEEEEec----------CCeEEEEecccCCceeeeeeccCCcc
Q 038568 221 KSRHMLVTTLV----------KHRSTVNALALNGDGSLLFSGGC----------DRWIVVWERERDHRMVFAEALWGHTG 280 (357)
Q Consensus 221 ~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~ 280 (357)
......+. -.......++++++++.++.... .++|.++|+.+.+....+.. ++
T Consensus 259 ---~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v--g~-- 331 (386)
T 3sjl_D 259 ---AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM--GH-- 331 (386)
T ss_dssp ---CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EE--
T ss_pred ---ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC--CC--
Confidence 11111111 01123345778999988887653 25799999999886544332 22
Q ss_pred ceEEEeecCc---eEEE-ecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeC
Q 038568 281 ALLCLINVGD---LLAS-GSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISS 333 (357)
Q Consensus 281 ~v~~~~~~~~---~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 333 (357)
.+..+.++++ +|++ ...++.|.++|..++ +.+..+..- +.-+.|.+++|
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~---k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLYIHDAESG---EELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEEEEETTTC---CEEEEECCC-CSSCCEEEECC
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEEEEECCCC---cEEEEecCC-CCCceeEECCc
Confidence 3445555443 5555 456899999999998 444444432 22344555555
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=2.2e-10 Score=94.86 Aligned_cols=263 Identities=11% Similarity=0.092 Sum_probs=152.8
Q ss_pred cceeEEEEe--cceEEEee--CC-ceEEEeccCCccccceecc----ccCCCCceEEEEEecCc-eEEeec------CCe
Q 038568 30 MIISCLAVH--NSLLYAAS--LN-EINVFDLISDYSHVDTFSN----DLSSSGSVKSITFHITK-IFTAHQ------DCK 93 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t~~--~d-~i~iw~~~~~~~~~~~~~~----~~~~~~~v~~l~~~~~~-l~~~~~------d~~ 93 (357)
.....++++ |+++++.. .+ .++||.+ ++++ +..+.. ...+...+..+++.+++ |+.+.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~-~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAEL-TQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEE-ETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEE-CCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 568899998 77777754 23 5788888 4443 222211 11256789999999977 555442 478
Q ss_pred EEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeE-EEEe---cCCeEEEE
Q 038568 94 IRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVS---WDRSFKIW 167 (357)
Q Consensus 94 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~---~dg~i~iw 167 (357)
|.+||+.+++....+...... ..+...+..+++++ ..+ ++.. .++.|.+|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~------------------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPI------------------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTT------------------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEECCCCeEEEEEECChhh------------------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 999999887654443221000 02234567888886 444 4444 57899999
Q ss_pred EcCcchhhhhccccccccEE-EEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecC
Q 038568 168 NASNYKCLESVNKAHEDAVN-AVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD 245 (357)
Q Consensus 168 d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 245 (357)
|+.+++....+ ..|..... ...+.+++. +.+...++.++.|. ..+..|+|+|+
T Consensus 151 d~~~g~~~r~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~------------------------~~~~gia~s~d 205 (343)
T 2qe8_A 151 DLQTGLAARVL-QGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH------------------------LGVNGIVLDAE 205 (343)
T ss_dssp ETTTCCEEEEC-TTCTTTSCCSCCCEETTEECBEECTTSCEECCC------------------------CCEEEEEECTT
T ss_pred ECCCCCEEEEe-cCCCcccccccceeECCEEEEeccCCCceecee------------------------cccceeEeccC
Confidence 99887655444 22211100 023344553 55555666654432 13567999999
Q ss_pred CCEEEEEecCC-eEEEEecccCC--cee---eee--eccCCccceEEEeec--CceEEEecCCCeEEEeeCCCCcceeee
Q 038568 246 GSLLFSGGCDR-WIVVWERERDH--RMV---FAE--ALWGHTGALLCLINV--GDLLASGSADRTVRIWQRGKENCYRCM 315 (357)
Q Consensus 246 ~~~l~~~~~dg-~i~vwd~~~~~--~~~---~~~--~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vw~~~~~~~~~~~ 315 (357)
++.|+.+..++ .+..++..... ... ... ...++......++++ +.++++...++.|.+||..+++ ...+
T Consensus 206 g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~ 284 (343)
T 2qe8_A 206 NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLL 284 (343)
T ss_dssp SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEE
T ss_pred CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEE
Confidence 99888887766 55555432110 000 000 011222233334454 4477888888999999985552 2222
Q ss_pred eeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCe
Q 038568 316 AFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGE 352 (357)
Q Consensus 316 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~ 352 (357)
... .+...++++++.+++. ++++.+..+.
T Consensus 285 ~~~-~~~~~p~~va~~~~g~-------l~v~~~~~~~ 313 (343)
T 2qe8_A 285 VTD-EKLSWTDSFNFGSDGY-------LYFDCNQLHH 313 (343)
T ss_dssp EEC-GGGSCEEEEEECTTSC-------EEEEECCGGG
T ss_pred EEC-CceecCCeeEECCCCc-------EEEEeCcccc
Confidence 221 1345689999999887 6766654443
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.31 E-value=1.7e-08 Score=84.16 Aligned_cols=244 Identities=8% Similarity=-0.025 Sum_probs=148.1
Q ss_pred cccceecccccCCCCCCCccceeEEEEe--cceEEEee----------CC-ceEEEeccCCccccceeccc-cC---CCC
Q 038568 11 AFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAAS----------LN-EINVFDLISDYSHVDTFSND-LS---SSG 73 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~----------~d-~i~iw~~~~~~~~~~~~~~~-~~---~~~ 73 (357)
..+.+.+.++.. -..+ .++++ |++|+++. .+ .|.+||. .+.+.+..+... .. +..
T Consensus 54 ~~t~~~~~~i~~-----g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~-~t~~~~~~i~~~~~~~~~~g~ 125 (373)
T 2mad_H 54 AGSGSILGHVNG-----GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP-VTFLPIADIELPDAPRFDVGP 125 (373)
T ss_pred CCCCeEEEEecC-----CCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC-CCCcEEEEEECCCccccccCC
Confidence 345566666653 2233 88888 88888875 25 8999999 887777766531 00 013
Q ss_pred ceEEEEEecCc--eEEeec--CCeEEEEecCCccceee-eeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 74 SVKSITFHITK--IFTAHQ--DCKIRVWKITASRQHQL-VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 74 ~v~~l~~~~~~--l~~~~~--d~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
....++|+|++ |+.+.. ++.|.++| .+++.... +.. ... +
T Consensus 126 ~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-------------------------------~~~---~ 170 (373)
T 2mad_H 126 YSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-------------------------------PTC---Y 170 (373)
T ss_pred CccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-------------------------------Cce---E
Confidence 34589999997 666653 57899999 88765443 221 111 2
Q ss_pred EEec---CeEEEEecCCeEEEEEcCcchhhhhcc----cccccc-EEEEEEecCC-eEEEEeCCCeEEEEEccccccccc
Q 038568 149 VVKQ---GLMYSVSWDRSFKIWNASNYKCLESVN----KAHEDA-VNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 149 ~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~-v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
.+.+ ..+++.+.||.+.++|. +++...... .....+ .....+.+++ .++..+..+.+.+.|+....
T Consensus 171 ~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~---- 245 (373)
T 2mad_H 171 HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAG---- 245 (373)
T ss_pred EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCc----
Confidence 2223 56677788999999999 776553220 011112 1223455554 44444467899999985211
Q ss_pred cccceeeeeEeec----------cccceeEEEEecCCCEEEEEec----------CCeEEEEecccCCceeeeeeccCCc
Q 038568 220 RKSRHMLVTTLVK----------HRSTVNALALNGDGSLLFSGGC----------DRWIVVWERERDHRMVFAEALWGHT 279 (357)
Q Consensus 220 ~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~ 279 (357)
......+.. .......+.++|+++.++++.. ++.|.++|+.+.+....+. .++
T Consensus 246 ----~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~--~g~- 318 (373)
T 2mad_H 246 ----ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGH- 318 (373)
T ss_pred ----ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE--CCC-
Confidence 011111110 1122344788999988887653 3579999999887544332 122
Q ss_pred cceEEEeecC--c-eEEEec-CCCeEEEeeCCCCc
Q 038568 280 GALLCLINVG--D-LLASGS-ADRTVRIWQRGKEN 310 (357)
Q Consensus 280 ~~v~~~~~~~--~-~l~~~~-~dg~i~vw~~~~~~ 310 (357)
....+.+++ + .++++. .++.|.++|..+++
T Consensus 319 -~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~ 352 (373)
T 2mad_H 319 -DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred -CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCC
Confidence 345555654 4 677776 58999999999873
No 219
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.30 E-value=1.1e-10 Score=96.10 Aligned_cols=257 Identities=15% Similarity=0.110 Sum_probs=155.8
Q ss_pred ceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceee
Q 038568 31 IISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQL 107 (357)
Q Consensus 31 ~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~ 107 (357)
...+.... +..|..++.+ .|..||. +++....+.. ....+.++...+++ +..++.+ |..+|. +++....
T Consensus 21 ~~~~~~~d~~g~l~v~t~~~~l~~~d~--~g~~~~~~~~---~~~~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~~ 92 (330)
T 3hxj_A 21 IDSSPILAKNGTIYLGSSNKNLYAINT--DGSVKWFFKS---GEIIECRPSIGKDGTIYFGSDK--VYAINP-DGTEKWR 92 (330)
T ss_dssp ECCCCEECTTSCEECSSTTTTTEEECT--TSCEEESSCG---GGEEEECCEETTTTEECCSSCE--EEEECC-CGGGGGG
T ss_pred cccCceEccCCeEEEEcCCCEEEEECC--CCcEEEEEec---CCCcccceEEecCCcEEEecCc--EEEECC-CCcEEEE
Confidence 34455564 6678888878 8999993 4455444443 44456777777666 6666655 888886 4433222
Q ss_pred eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhccccccccEE
Q 038568 108 VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVN 187 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 187 (357)
... ..............+..++.++.|..+|.. ++..... ......+.
T Consensus 93 ~~~------------------------------~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~-~~~~~~~~ 140 (330)
T 3hxj_A 93 FDT------------------------------KKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRF-KTKKAIYA 140 (330)
T ss_dssp SCC-----------------------------------CCEEEETTEEEEECTTSEEEEECTT-SCEEEEE-ECSSCCCS
T ss_pred EEC------------------------------CCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEE-cCCCceee
Confidence 111 011111122225778888889999999988 6666555 33444566
Q ss_pred EEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCC
Q 038568 188 AVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDH 267 (357)
Q Consensus 188 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 267 (357)
++...+++.+..++.++.|..+|.. .............+.++...+++.++ .++ +.|..+| .+++
T Consensus 141 ~~~~~~~g~l~vgt~~~~l~~~d~~-----------g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~ 205 (330)
T 3hxj_A 141 TPIVSEDGTIYVGSNDNYLYAINPD-----------GTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGT 205 (330)
T ss_dssp CCEECTTSCEEEECTTSEEEEECTT-----------SCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSC
T ss_pred eeEEcCCCEEEEEcCCCEEEEECCC-----------CCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCc
Confidence 6777778888889989999999874 12222333334556777777777644 444 7799999 5555
Q ss_pred ceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEE
Q 038568 268 RMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGS 346 (357)
Q Consensus 268 ~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s 346 (357)
... ........+.++..+++ .|..++.++.|..++.. + ..+.........+.++...+++ .|..
T Consensus 206 ~~~---~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~-g---~~~~~~~~~~~~~~~~~~~~~g--------~l~v 270 (330)
T 3hxj_A 206 EKW---NFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD-G---TEKWRFKTGKRIESSPVIGNTD--------TIYF 270 (330)
T ss_dssp EEE---EECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT-S---CEEEEEECSSCCCSCCEECTTS--------CEEE
T ss_pred EEE---EEccCCcceeceEECCCCeEEEEcCCCeEEEECCC-C---CEeEEeeCCCCccccceEcCCC--------eEEE
Confidence 332 22223345666667766 77778888888888753 3 2223333333334455555555 3556
Q ss_pred cCCCCeEEecC
Q 038568 347 GSLNGEIKVWD 357 (357)
Q Consensus 347 ~~~dg~v~~wd 357 (357)
++.+|.|..+|
T Consensus 271 ~t~~ggl~~~d 281 (330)
T 3hxj_A 271 GSYDGHLYAIN 281 (330)
T ss_dssp ECTTCEEEEEC
T ss_pred ecCCCCEEEEC
Confidence 66777777664
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=1.7e-09 Score=97.72 Aligned_cols=196 Identities=13% Similarity=0.122 Sum_probs=117.4
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCC-------Cce-EEEEEecCceEEeecCCeEEEEecCCccceeeee
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSS-------GSV-KSITFHITKIFTAHQDCKIRVWKITASRQHQLVS 109 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~-------~~v-~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 109 (357)
+..+++++.+ .|..+|. .+++.+-.+....... ..+ ..++...+.++.++.|+.|..+|..+++..-...
T Consensus 70 ~g~vyv~~~~~~v~AlD~-~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDA-RDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEET-TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEC-CCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCCEEEEEECCCCCEeeeec
Confidence 6777788888 9999999 8888887775311000 001 1234445568889999999999999998765543
Q ss_pred ecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEe------cCCeEEEEEcCcchhhhhccccc-
Q 038568 110 TLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVS------WDRSFKIWNASNYKCLESVNKAH- 182 (357)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~- 182 (357)
....... .+.....++ .....++.++ .+|.|..||.++++.+..+....
T Consensus 149 ~~~~~~~--------------------~~~~~~sP~----v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 204 (689)
T 1yiq_A 149 TRADHKR--------------------SYTITGAPR----VVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPG 204 (689)
T ss_dssp CCSCTTS--------------------CCBCCSCCE----EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC
T ss_pred CcCCCCC--------------------CccccCCcE----EECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCC
Confidence 3100000 000001111 1234455544 36899999999998876652110
Q ss_pred -----------------------------cccEEEEEEecCC-eEEEEeCCCe-------------------EEEEEccc
Q 038568 183 -----------------------------EDAVNAVVVSDNG-VVYTGSADGR-------------------IRVWERSV 213 (357)
Q Consensus 183 -----------------------------~~~v~~~~~~~~~-~l~~~~~d~~-------------------i~i~d~~~ 213 (357)
......++++|+. +++.+..++. |..+|.++
T Consensus 205 ~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~T 284 (689)
T 1yiq_A 205 DPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADT 284 (689)
T ss_dssp CTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTT
T ss_pred CcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccC
Confidence 0111256788765 6777777653 89999882
Q ss_pred cccccccccceeeeeEeec--cc-------cceeEEEEecCCC---EEEEEecCCeEEEEecccCCce
Q 038568 214 VDHNKERKSRHMLVTTLVK--HR-------STVNALALNGDGS---LLFSGGCDRWIVVWERERDHRM 269 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~ 269 (357)
.+.+-.+.. |. .++.......+|+ .++.++.+|.++++|.++++.+
T Consensus 285 ----------G~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 285 ----------GEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp ----------CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ----------CceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 223322221 21 1222223333565 7889999999999999998864
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.28 E-value=1.3e-08 Score=83.52 Aligned_cols=212 Identities=8% Similarity=0.023 Sum_probs=129.4
Q ss_pred ceeEEEEe---cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccce
Q 038568 31 IISCLAVH---NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQH 105 (357)
Q Consensus 31 ~i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~ 105 (357)
...+.+|+ +.++++...+ .|..||. ++++. ..+. ....+.+++|.+++ ++.++.+ .|.+||..+++..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~-~~~~~-~~~~----~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHL-ASGRK-TVHA----LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLT 122 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEET-TTTEE-EEEE----CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEEC-CCCcE-EEEE----CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcEE
Confidence 34567888 4566666667 9999998 66543 3343 45689999999987 6556544 4999998776532
Q ss_pred eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEec-------CCeEEEEEcCcchhhhh
Q 038568 106 QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSW-------DRSFKIWNASNYKCLES 177 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~-------dg~i~iwd~~~~~~~~~ 177 (357)
. +..... ......+.++++++ ..++.++. .+.|..++ +++. ..
T Consensus 123 ~-~~~~~~-------------------------~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~ 173 (326)
T 2ghs_A 123 L-HAELES-------------------------DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TK 173 (326)
T ss_dssp E-EECSST-------------------------TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EE
T ss_pred E-EeeCCC-------------------------CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EE
Confidence 2 211100 01124678899998 44444442 24555555 3432 22
Q ss_pred ccccccccEEEEEEecCCe-E-EEEeCCCeEEEEEcc--cc-ccccccccceeeeeEeeccccceeEEEEecCCCEEEEE
Q 038568 178 VNKAHEDAVNAVVVSDNGV-V-YTGSADGRIRVWERS--VV-DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSG 252 (357)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~i~i~d~~--~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 252 (357)
+ .........++|+|++. + ++...++.|.+||+. .. .. ........+......+..++++++|+++++.
T Consensus 174 ~-~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~-----~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 174 L-FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT-----GKAEVFIDSTGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp E-EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS-----SCCEEEEECTTSSSEEEEEEECTTSCEEEEE
T ss_pred e-eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcc-----cCceEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 2 22334567899999993 4 444567899999974 11 00 0011222222234556789999999877777
Q ss_pred ecCCeEEEEecccCCceeeeeeccCCccceEEEeec
Q 038568 253 GCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288 (357)
Q Consensus 253 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 288 (357)
..++.|.+||.. ++.. ..+..+...+.+++|.
T Consensus 248 ~~~~~v~~~d~~-g~~~---~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 248 WGEGAVDRYDTD-GNHI---ARYEVPGKQTTCPAFI 279 (326)
T ss_dssp ETTTEEEEECTT-CCEE---EEEECSCSBEEEEEEE
T ss_pred eCCCEEEEECCC-CCEE---EEEECCCCCcEEEEEe
Confidence 677889999984 5432 2333344568888886
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.27 E-value=9e-09 Score=93.49 Aligned_cols=235 Identities=15% Similarity=0.145 Sum_probs=138.6
Q ss_pred CccceeEEEEe--cceEE-----EeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCC-----
Q 038568 28 HHMIISCLAVH--NSLLY-----AASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDC----- 92 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~-----t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~----- 92 (357)
|...+..++|| |++|| .|+.. .|++||+ ++++.+.... .......++|+ |+ |+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl-~tg~~~~~~~----~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDV-ESKQPLETPL----KDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEET-TTCSEEEEEE----EEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEEC-CCCCCCcccc----CCceeccEEEe-CCCEEEEEEecCccccc
Confidence 66688899999 88888 34455 8999999 8877544311 11123567899 76 77777664
Q ss_pred --------eEEEEecCCcccee-eeeecCccccceeeeecCCCeEEEeccccccccc-ccccEEEEEEec--CeEEE-Ee
Q 038568 93 --------KIRVWKITASRQHQ-LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLE-HWDAVSDLVVKQ--GLMYS-VS 159 (357)
Q Consensus 93 --------~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~l~~-~~ 159 (357)
.|.+|++.++.... .+...+ . |......+.++| ++|+. .+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~---------------------------~~~~~~~~~~~~SpDg~~l~~~~~ 253 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAI---------------------------PAQHHRYVGATVTEDDRFLLISAA 253 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCS---------------------------GGGCCSEEEEEECTTSCEEEEEEE
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecC---------------------------CCCCeEEEEEEEcCCCCEEEEEEc
Confidence 38889887664321 121111 2 344567888999 55543 33
Q ss_pred c---CCeEEEEEcCcch-hhhhccccccccEEEEEEecCC-e-EEEEeCC---CeEEEEEccccccccccccceeeeeEe
Q 038568 160 W---DRSFKIWNASNYK-CLESVNKAHEDAVNAVVVSDNG-V-VYTGSAD---GRIRVWERSVVDHNKERKSRHMLVTTL 230 (357)
Q Consensus 160 ~---dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~ 230 (357)
. ++.|.++|+.++. ....+ ..+....... +++++ . ++....+ +.|..+|+.. .. ......+
T Consensus 254 ~~~~~~~i~~~d~~~~~~~~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~------~~--~~~~~~l 323 (693)
T 3iuj_A 254 NSTSGNRLYVKDLSQENAPLLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN------PG--PAHWRDL 323 (693)
T ss_dssp SSSSCCEEEEEETTSTTCCCEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS------CC--GGGCEEE
T ss_pred cCCCCcEEEEEECCCCCCceEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC------CC--ccccEEE
Confidence 2 3589999997764 33444 3344444444 44544 4 3444333 6788898872 11 1012234
Q ss_pred eccccceeEEEEecCCCEEEEEec-CC--eEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCC----CeE
Q 038568 231 VKHRSTVNALALNGDGSLLFSGGC-DR--WIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSAD----RTV 301 (357)
Q Consensus 231 ~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~d----g~i 301 (357)
..+...+. .|+++++.|+.... ++ .|++||+..+.. ..+ .......+..+.++++ .++....+ +.+
T Consensus 324 ~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l--~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l 398 (693)
T 3iuj_A 324 IPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRV-REV--ALPGLGSVSGFNGKHDDPALYFGFENYAQPPTL 398 (693)
T ss_dssp ECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEE-EEE--CCSSSSEEEECCCCTTCSCEEEEEECSSSCCEE
T ss_pred ecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCee-EEe--ecCCCceEEeeecCCCCCEEEEEecCCCCCCEE
Confidence 44555554 88998887776665 43 689999874431 111 1223445666666543 33333222 789
Q ss_pred EEeeCCCCc
Q 038568 302 RIWQRGKEN 310 (357)
Q Consensus 302 ~vw~~~~~~ 310 (357)
..||+.+++
T Consensus 399 ~~~d~~~g~ 407 (693)
T 3iuj_A 399 YRFEPKSGA 407 (693)
T ss_dssp EEECTTTCC
T ss_pred EEEECCCCe
Confidence 999987763
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.26 E-value=4.6e-09 Score=88.31 Aligned_cols=259 Identities=9% Similarity=-0.043 Sum_probs=157.7
Q ss_pred CceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee----------cCCeEEEEecCCccceeeeeecCccc
Q 038568 48 NEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH----------QDCKIRVWKITASRQHQLVSTLPTVK 115 (357)
Q Consensus 48 d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~ 115 (357)
+.|.++|. .+.+.+..+.. -..+ .++++||+ ++.+. .++.|.++|..+.+....+.......
T Consensus 99 ~~VsVID~-~t~~vv~~I~v---G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r 172 (426)
T 3c75_H 99 TQQFVIDG-STGRILGMTDG---GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPR 172 (426)
T ss_dssp EEEEEEET-TTTEEEEEEEE---CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCC
T ss_pred CeEEEEEC-CCCEEEEEEEC---CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccc
Confidence 48999999 99999999886 4455 89999997 55554 46789999999987766554310000
Q ss_pred cceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec--CCeEEEEEcCcchhhhhccccccccEEEEEE
Q 038568 116 DRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW--DRSFKIWNASNYKCLESVNKAHEDAVNAVVV 191 (357)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 191 (357)
. ........+.++| ++++.+.. ++.|.+.|+.+++.+.++... .. ...
T Consensus 173 ---------------------~--~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~--g~---~~~ 224 (426)
T 3c75_H 173 ---------------------F--LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP--DC---YHI 224 (426)
T ss_dssp ---------------------C--CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--SE---EEE
T ss_pred ---------------------c--ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC--Cc---eee
Confidence 0 0011234567888 67777764 578999999999988887321 11 233
Q ss_pred ecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccce-eEEEEecCCCEEEEEecCCeEEEEecccCCc
Q 038568 192 SDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV-NALALNGDGSLLFSGGCDRWIVVWERERDHR 268 (357)
Q Consensus 192 ~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 268 (357)
.|++ .+++.+.||.+.+.+....+. .......+.....++ ..+.|.+++..++.....+.|.+.|+.....
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~~~~~v------~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~ 298 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDFADGET------KVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGA 298 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEECCTTCC------EEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCE
T ss_pred ccCCCcEEEEEcCCCCEEEEECCCCcE------EEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCce
Confidence 3443 466777888888888741110 000001111111121 2356788888877778889999999865432
Q ss_pred eeeeeecc------------CCccceEEEeecCceEEEec----------CCCeEEEeeCCCCcceeeeeeecCCcCceE
Q 038568 269 MVFAEALW------------GHTGALLCLINVGDLLASGS----------ADRTVRIWQRGKENCYRCMAFLEGHEKPVK 326 (357)
Q Consensus 269 ~~~~~~~~------------~~~~~v~~~~~~~~~l~~~~----------~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~ 326 (357)
. ....+. ........+..+++.+++.. .++.|.+.|..+. +.+..+... ....
T Consensus 299 ~-v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~---kvv~~I~vg-~~P~ 373 (426)
T 3c75_H 299 T-FRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG---ERINKIELG-HEID 373 (426)
T ss_dssp E-ECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC---CEEEEEEEE-EEEC
T ss_pred E-EeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC---eEEEEEECC-CCcC
Confidence 1 111100 01111134444445444432 1457999999997 444444322 2578
Q ss_pred EEEEeeCCCCCCCCeEEEEEcC-CCCeEEecC
Q 038568 327 SLVAISSSSSASNGIVSIGSGS-LNGEIKVWD 357 (357)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~s~~-~dg~v~~wd 357 (357)
++.|+|+++ .++++.. .++.|.++|
T Consensus 374 gia~spDg~------~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 374 SINVSQDAE------PLLYALSAGTQTLHIYD 399 (426)
T ss_dssp EEEECCSSS------CEEEEEETTTTEEEEEE
T ss_pred eEEEccCCC------EEEEEEcCCCCeEEEEE
Confidence 999999974 1454444 689998876
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.25 E-value=3.2e-09 Score=95.72 Aligned_cols=272 Identities=10% Similarity=0.096 Sum_probs=161.1
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCC--------CceEEEEEecCceEEeecCCeEEEEecCCccceeeee
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSS--------GSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVS 109 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~--------~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 109 (357)
+..|++++.+ .|..+|. .+++.+-.+....... .....+++..+.++.++.|+.|..+|..+++..-...
T Consensus 77 ~g~vyv~~~~~~v~AlD~-~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDT-RTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TTEEEEECGGGCEEEEET-TTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEEC-CCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCCEEEEEECCCCCEEeeec
Confidence 6677777777 9999999 8888887766411000 0112344555668889999999999999998765544
Q ss_pred ecCccccceeeeecCCCeEEEecccccccccccccEE-EEEEecCeEEEEec------CCeEEEEEcCcchhhhhccccc
Q 038568 110 TLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVS-DLVVKQGLMYSVSW------DRSFKIWNASNYKCLESVNKAH 182 (357)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~ 182 (357)
...... ....+. ........++.++. +|.|+.+|.++++.+..+....
T Consensus 156 ~~~~~~-------------------------~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 210 (677)
T 1kb0_A 156 TFEGQK-------------------------GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVP 210 (677)
T ss_dssp TTTTCC-------------------------SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSC
T ss_pred CCcCcC-------------------------cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCC
Confidence 220000 000000 01112355555553 6899999999998876652111
Q ss_pred c-------------------------------ccEEEEEEecCC-eEEEEeCCC-------------------eEEEEEc
Q 038568 183 E-------------------------------DAVNAVVVSDNG-VVYTGSADG-------------------RIRVWER 211 (357)
Q Consensus 183 ~-------------------------------~~v~~~~~~~~~-~l~~~~~d~-------------------~i~i~d~ 211 (357)
. .....++++|++ .++.+..++ .|..+|.
T Consensus 211 ~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~ 290 (677)
T 1kb0_A 211 GDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDP 290 (677)
T ss_dssp CCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECT
T ss_pred CCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEEC
Confidence 0 111356778766 666666553 4888888
Q ss_pred cccccccccccceeeeeEee--ccc-------cceeEEEEecCC---CEEEEEecCCeEEEEecccCCceeeeeeccC--
Q 038568 212 SVVDHNKERKSRHMLVTTLV--KHR-------STVNALALNGDG---SLLFSGGCDRWIVVWERERDHRMVFAEALWG-- 277 (357)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~--~~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~-- 277 (357)
++ .+.+-.+. .|. ....-+....+| ..++.++.+|.++++|..+++.+........
T Consensus 291 ~T----------G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 291 DT----------GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW 360 (677)
T ss_dssp TT----------CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred CC----------CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc
Confidence 72 22222222 121 122223334477 6899999999999999999886543321100
Q ss_pred ------Cccce------------------------EEEeecCc--eEEEecC----------------------------
Q 038568 278 ------HTGAL------------------------LCLINVGD--LLASGSA---------------------------- 297 (357)
Q Consensus 278 ------~~~~v------------------------~~~~~~~~--~l~~~~~---------------------------- 297 (357)
...++ ..++++++ ++++...
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 00000 13455554 5544322
Q ss_pred ---------------CCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 298 ---------------DRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 298 ---------------dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.|.|..||+.+++ .+-... +..++.+..+...+. +++.++.||.+++||
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~---~~W~~~-~~~~~~~g~~~~~g~-------~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQK---AAWSVE-HVSPWNGGTLTTAGN-------VVFQGTADGRLVAYH 504 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTE---EEEEEE-ESSSCCCCEEEETTT-------EEEEECTTSEEEEEE
T ss_pred ccccccccccCCCCCccEEEEEeCCCCc---EEeecC-CCCCCcCcceEeCCC-------EEEEECCCCcEEEEE
Confidence 2789999999883 333332 334455556677776 788889999999986
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.24 E-value=1.7e-08 Score=91.18 Aligned_cols=291 Identities=11% Similarity=0.081 Sum_probs=159.8
Q ss_pred EEEecceEEEeeCC-ceEEEeccCCccccceeccc-cC-CCCceE-EEEEecCceEEee------cCCeEEEEecCCccc
Q 038568 35 LAVHNSLLYAASLN-EINVFDLISDYSHVDTFSND-LS-SSGSVK-SITFHITKIFTAH------QDCKIRVWKITASRQ 104 (357)
Q Consensus 35 ~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~-~~-~~~~v~-~l~~~~~~l~~~~------~d~~i~vwd~~~~~~ 104 (357)
+++.+..+++++.| .|..+|. .+++.+-.+... .. ....+. +-....+.++.++ .++.|..||..+++.
T Consensus 117 ~~~~~g~v~v~~~dg~l~AlDa-~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 117 VAVWKGKVYVGVLDGRLEAIDA-KTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp CEEETTEEEEECTTSEEEEEET-TTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred cEEECCEEEEEccCCEEEEEEC-CCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 34457788888888 9999999 898888776641 00 001111 1111233455554 378999999999987
Q ss_pred eeeeeecCccccceeeeecCCCe-EEEecccccccc---cccccEEEEEEec--CeEEEEecCCe---------------
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNY-VTVRRHKKRLWL---EHWDAVSDLVVKQ--GLMYSVSWDRS--------------- 163 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~v~~~~~~~--~~l~~~~~dg~--------------- 163 (357)
.-.....+....... ..... ..........|. ++...-..+++++ ++++.++.++.
T Consensus 196 ~W~~~~~~~~p~~~~---~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~ 272 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPP---EGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNL 272 (689)
T ss_dssp EEEEESSCCCTTSCC---CSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCT
T ss_pred EEEecccCCCccccc---ccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 655543221100000 00000 000000000000 1112223567777 78888877763
Q ss_pred ----EEEEEcCcchhhhhcccc-cc-------ccEEEEEEecCC----eEEEEeCCCeEEEEEccccccccccccc----
Q 038568 164 ----FKIWNASNYKCLESVNKA-HE-------DAVNAVVVSDNG----VVYTGSADGRIRVWERSVVDHNKERKSR---- 223 (357)
Q Consensus 164 ----i~iwd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~~---- 223 (357)
|..+|.++++.+..++.. |. .+........++ .++.++.+|.++++|.++++........
T Consensus 273 y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w 352 (689)
T 1yiq_A 273 FLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSW 352 (689)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccc
Confidence 999999999988776322 11 122222222355 4888899999999998844322100000
Q ss_pred --------eeeeeE------eeccc-----------cceeEEEEecCCCEEEEEec------------------------
Q 038568 224 --------HMLVTT------LVKHR-----------STVNALALNGDGSLLFSGGC------------------------ 254 (357)
Q Consensus 224 --------~~~~~~------~~~~~-----------~~v~~~~~~~~~~~l~~~~~------------------------ 254 (357)
..++.. +.... ..-..++|+|+..++++...
T Consensus 353 ~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (689)
T 1yiq_A 353 TKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQL 432 (689)
T ss_dssp EEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCC
T ss_pred ccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccccccc
Confidence 000000 00000 01123788998887777532
Q ss_pred ---------------------CCeEEEEecccCCceeeeeeccCCccce-EEEeecCceEEEecCCCeEEEeeCCCCcce
Q 038568 255 ---------------------DRWIVVWERERDHRMVFAEALWGHTGAL-LCLINVGDLLASGSADRTVRIWQRGKENCY 312 (357)
Q Consensus 255 ---------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~ 312 (357)
+|.|+.||+.+++....... +.... -.+.-.+.+++.++.||.++.||.+++
T Consensus 433 g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~---~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG--- 506 (689)
T 1yiq_A 433 GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY---VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTG--- 506 (689)
T ss_dssp SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC---
T ss_pred CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC---CCCccCccceECCCEEEEECCCCcEEEEECCCC---
Confidence 37899999999875443332 21111 234456778999999999999999998
Q ss_pred eeeeeecCCcC-ceEEEEEeeCCC
Q 038568 313 RCMAFLEGHEK-PVKSLVAISSSS 335 (357)
Q Consensus 313 ~~~~~~~~h~~-~v~~~~~~~~~~ 335 (357)
+.+..++...+ .-.-+.|..+++
T Consensus 507 ~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 507 EKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp CEEEEEECSSCCCSCCEEEEETTE
T ss_pred ccceeeeCCCCcccCceEEEECCE
Confidence 44444443322 223466777776
No 226
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.23 E-value=6.3e-12 Score=105.04 Aligned_cols=178 Identities=15% Similarity=0.097 Sum_probs=97.9
Q ss_pred cCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe
Q 038568 82 ITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS 159 (357)
Q Consensus 82 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~ 159 (357)
.+.+++++.|+.|..||..+++..-.... ..+.+..+.. ..+++++
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--------------------------------~~~~s~p~~~~g~~~v~~s 56 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--------------------------------DPVLQVPTHVEEPAFLPDP 56 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--------------------------------CCSCCCC-----CCEEECT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--------------------------------CCceecceEcCCCEEEEeC
Confidence 34489999999999999999986554432 1111111122 4677778
Q ss_pred cCCeEEEEEcCcchhhhhccccccccEE-EEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeecccccee
Q 038568 160 WDRSFKIWNASNYKCLESVNKAHEDAVN-AVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVN 238 (357)
Q Consensus 160 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 238 (357)
.||.|+.||.++++.+..+.......+. +..+..++.+++++.++.++.||.++ .+.+..+..+.
T Consensus 57 ~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~t----------G~~~w~~~~~~---- 122 (369)
T 2hz6_A 57 NDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLT----------GEKQQTLSSAF---- 122 (369)
T ss_dssp TTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------
T ss_pred CCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCC----------CcEEEEecCCC----
Confidence 9999999999988876655211111111 11112355788888999999999882 22333332222
Q ss_pred EEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC-----ceEEEecCCCeEEEeeCCCCc
Q 038568 239 ALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG-----DLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 239 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~l~~~~~dg~i~vw~~~~~~ 310 (357)
...++|++..+++++.|+.|+.||.++++....... .. .....+.+ +.+++++.||.|+.||.++++
T Consensus 123 ~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 123 ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY-FD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp ----------EEEEEEEEEEECCCSSSSSCCCEEEE-EE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec-cc----ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 234566788899999999999999998875433321 11 11222333 567788899999999999884
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.21 E-value=2.2e-08 Score=90.31 Aligned_cols=288 Identities=10% Similarity=0.087 Sum_probs=160.1
Q ss_pred EEEecceEEEeeCC-ceEEEeccCCccccceeccc-cC-CCCceE-EEEEecCceEEeec------CCeEEEEecCCccc
Q 038568 35 LAVHNSLLYAASLN-EINVFDLISDYSHVDTFSND-LS-SSGSVK-SITFHITKIFTAHQ------DCKIRVWKITASRQ 104 (357)
Q Consensus 35 ~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~-~~-~~~~v~-~l~~~~~~l~~~~~------d~~i~vwd~~~~~~ 104 (357)
+++.+..|++++.| .|..+|. .+++.+..+... .. ....+. ......+.++.++. ++.|..+|..+++.
T Consensus 124 ~a~~~~~v~v~~~dg~l~alD~-~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~ 202 (677)
T 1kb0_A 124 VALWKGKVYVGAWDGRLIALDA-ATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGER 202 (677)
T ss_dssp CEEETTEEEEECTTSEEEEEET-TTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred ceEECCEEEEEcCCCEEEEEEC-CCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcE
Confidence 44557788888888 9999999 899888777641 00 001121 11122344666553 79999999999987
Q ss_pred eeeeeecCccccceeeeecCCCeEEEecccccccc---------cccccEEEEEEec--CeEEEEecCC-----------
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWL---------EHWDAVSDLVVKQ--GLMYSVSWDR----------- 162 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~--~~l~~~~~dg----------- 162 (357)
.-.............. .+ . .......|. +.......+++++ ++++.+..++
T Consensus 203 ~W~~~~~~~~~~~~~~--~~--~---~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~ 275 (677)
T 1kb0_A 203 KWRWFSVPGDPSKPFE--DE--S---MKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPK 275 (677)
T ss_dssp EEEEESSCCCTTSCCS--SH--H---HHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTT
T ss_pred EEEeccCCCCcccccc--cc--c---cccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCcc
Confidence 6655443221000000 00 0 000000010 1112223566766 6777776654
Q ss_pred --------eEEEEEcCcchhhhhcccccc--------ccEEEEEEecCC----eEEEEeCCCeEEEEEcccccccccccc
Q 038568 163 --------SFKIWNASNYKCLESVNKAHE--------DAVNAVVVSDNG----VVYTGSADGRIRVWERSVVDHNKERKS 222 (357)
Q Consensus 163 --------~i~iwd~~~~~~~~~~~~~~~--------~~v~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~ 222 (357)
.|..+|.++++.+..++..+. .....+....+| .++.++.+|.++++|.++++.......
T Consensus 276 ~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~ 355 (677)
T 1kb0_A 276 GGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNF 355 (677)
T ss_dssp CCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred CCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccc
Confidence 599999999998877642221 112222333355 388899999999999884332111000
Q ss_pred ceee-eeEeeccccce------------------------eEEEEecCCCEEEEEecC----------------------
Q 038568 223 RHML-VTTLVKHRSTV------------------------NALALNGDGSLLFSGGCD---------------------- 255 (357)
Q Consensus 223 ~~~~-~~~~~~~~~~v------------------------~~~~~~~~~~~l~~~~~d---------------------- 255 (357)
.... ...+.....++ ..++|+|+..++++...+
T Consensus 356 ~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~ 435 (677)
T 1kb0_A 356 VPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQ 435 (677)
T ss_dssp SCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTT
T ss_pred cccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccc
Confidence 0000 00000000001 257899988888776432
Q ss_pred ---------------------CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceee
Q 038568 256 ---------------------RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRC 314 (357)
Q Consensus 256 ---------------------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 314 (357)
|.|..||+.+++....... +....-..+...+..++.++.||.+++||.++++ .
T Consensus 436 ~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~--~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~---~ 510 (677)
T 1kb0_A 436 SGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH--VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE---K 510 (677)
T ss_dssp GGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE--SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---E
T ss_pred cccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC--CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc---e
Confidence 7899999998875443332 1111112344556788889999999999999984 4
Q ss_pred eeeecC-CcCceEEEEEeeCCC
Q 038568 315 MAFLEG-HEKPVKSLVAISSSS 335 (357)
Q Consensus 315 ~~~~~~-h~~~v~~~~~~~~~~ 335 (357)
+..+.. +...-.-+.+..+++
T Consensus 511 lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 511 LWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp EEEEECSSCCCSCCEEEEETTE
T ss_pred eeeeeCCCCcccCCEEEEeCCE
Confidence 444432 222223455667765
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.21 E-value=1.9e-08 Score=81.77 Aligned_cols=223 Identities=10% Similarity=0.076 Sum_probs=132.0
Q ss_pred CccceeEEEEe--cc-eEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEee-cCCeEEEEecCC
Q 038568 28 HHMIISCLAVH--NS-LLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAH-QDCKIRVWKITA 101 (357)
Q Consensus 28 h~~~i~~~~~s--~~-~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~-~d~~i~vwd~~~ 101 (357)
........+|+ ++ ++++...+ .|..|+. .. + ...+.. +...+..+++.+++ |+++. .++.|.+|+.+
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g-~-~~~~~~---~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DG-T-VDVLLD---ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TS-C-EEEEEE---SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CC-C-EEEEeC---CCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 44566788888 66 66676677 9999987 43 3 345554 66788999999987 66555 45789999976
Q ss_pred ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEE----Eec-------------CC
Q 038568 102 SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYS----VSW-------------DR 162 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~----~~~-------------dg 162 (357)
++.......... .....+.++++.+ .+.++ |.. .+
T Consensus 116 g~~~~~~~~~~~--------------------------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 116 GQAHLLVGRYAG--------------------------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp SCEEEEECEETT--------------------------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred CCEEEEEeccCC--------------------------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 432211111100 1123456778887 44443 321 25
Q ss_pred eEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEeCC------CeEEEEEccccccccccccceeeeeEeecccc
Q 038568 163 SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGSAD------GRIRVWERSVVDHNKERKSRHMLVTTLVKHRS 235 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (357)
.|..+|..+++... + . .......++|+|++. |+.+... +.|.+|++.. .. .............
T Consensus 170 ~v~~~d~~~g~~~~-~-~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~------~~-l~~~~~~~~~~~~ 239 (305)
T 3dr2_A 170 SVYRLPPDGSPLQR-M-A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD------GA-LHDRRHFASVPDG 239 (305)
T ss_dssp EEEEECSSSCCCEE-E-E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET------TE-EEEEEEEECCSSS
T ss_pred eEEEEcCCCCcEEE-E-e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC------CC-ccCCeEEEECCCC
Confidence 67778876655332 2 2 334567899999994 6666554 7899999862 11 0000011111234
Q ss_pred ceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc--eEEEecCCCe
Q 038568 236 TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD--LLASGSADRT 300 (357)
Q Consensus 236 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~ 300 (357)
....++++++|+ |.+++.++ |.+|+.. ++....+. ... .+..++|.++ .|..++.++.
T Consensus 240 ~pdgi~~d~~G~-lwv~~~~g-v~~~~~~-g~~~~~~~---~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 240 LPDGFCVDRGGW-LWSSSGTG-VCVFDSD-GQLLGHIP---TPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp CCCSEEECTTSC-EEECCSSE-EEEECTT-SCEEEEEE---CSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred CCCeEEECCCCC-EEEecCCc-EEEECCC-CCEEEEEE---CCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 456789999998 44444554 9999985 44332222 222 3666677543 6666665543
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.21 E-value=2.6e-07 Score=73.45 Aligned_cols=245 Identities=10% Similarity=0.082 Sum_probs=143.0
Q ss_pred cceEEEeeCCceEEEeccCCcccc-----ceeccccCCCCceEEEEEecCc--e-EEeecCCeEEEEecCCccceeeeee
Q 038568 39 NSLLYAASLNEINVFDLISDYSHV-----DTFSNDLSSSGSVKSITFHITK--I-FTAHQDCKIRVWKITASRQHQLVST 110 (357)
Q Consensus 39 ~~~l~t~~~d~i~iw~~~~~~~~~-----~~~~~~~~~~~~v~~l~~~~~~--l-~~~~~d~~i~vwd~~~~~~~~~~~~ 110 (357)
|.+|+.+..+.|+.+++ +..... ..+.. ....+..++|+++. | ++-..++.|.++++........+.
T Consensus 1 ~~~l~~~~~~~I~~~~~-~g~~~~~~~~~~~~~~---~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~- 75 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPL-ERNTMKKTEAKAFLHI---PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR- 75 (267)
T ss_dssp CEEEEEEEEEEEEEEEE-SSSCBCGGGCEEEEEE---EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC-
T ss_pred CcEEEEEcCCeEEEEEe-cCcccccccceeeecC---CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE-
Confidence 34566665448888888 553321 11221 23467899999853 4 444557899999987653221110
Q ss_pred cCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEE-ecCCeEEEEEcCcchhhhhccccccccEE
Q 038568 111 LPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSV-SWDRSFKIWNASNYKCLESVNKAHEDAVN 187 (357)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 187 (357)
........+++.+ +.++.+ ...+.|.++++.... ...+.........
T Consensus 76 -----------------------------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~ 125 (267)
T 1npe_A 76 -----------------------------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPR 125 (267)
T ss_dssp -----------------------------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEE
T ss_pred -----------------------------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCcc
Confidence 1123567888886 445444 456789999986432 2222122224578
Q ss_pred EEEEecC-CeEEEEeC---CCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEE-ecCCeEEEEe
Q 038568 188 AVVVSDN-GVVYTGSA---DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWE 262 (357)
Q Consensus 188 ~~~~~~~-~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd 262 (357)
.++++|+ +.|+.+.. .+.|..+++. .. ....+ ..........+++++++..|+.+ ...+.|.++|
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~d------g~--~~~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMD------GT--NRRIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETT------SC--CCEEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecC------CC--CcEEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 9999995 56555543 3688888875 10 11111 11223457889999987666554 4568899999
Q ss_pred cccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecCCc-CceEEEEEeeCCC
Q 038568 263 RERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHE-KPVKSLVAISSSS 335 (357)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~ 335 (357)
+.......... +. .....++.+++ ++++....+.|..+|..++ +.+..+.... ....++++.|++-
T Consensus 196 ~~g~~~~~~~~---~~-~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g---~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 196 PAQPGRRKVLE---GL-QYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS---KEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTEEEEEEEEE---CC-CSEEEEEEETTEEEEEETTTTEEEEEETTTT---EEEEEECCSSCCCCCCEEEECSCC
T ss_pred cCCCceEEEec---CC-CCceEEEEeCCEEEEEECCCCeEEEEeCCCC---CceEEEccccccccceeeecCccC
Confidence 97543222221 11 12245555556 4445556789999999887 4444444332 2467888888763
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.19 E-value=5.4e-09 Score=94.93 Aligned_cols=219 Identities=11% Similarity=0.096 Sum_probs=125.1
Q ss_pred CCCceEEEEEecCc--eEE-----eecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccc
Q 038568 71 SSGSVKSITFHITK--IFT-----AHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWD 143 (357)
Q Consensus 71 ~~~~v~~l~~~~~~--l~~-----~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
+...+..++|+||+ |+- |+....|++||+.+++.... .+. . .
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~---------------------------~--~ 175 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLK---------------------------D--V 175 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEE---------------------------E--E
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccC---------------------------C--c
Confidence 55678899999997 442 23335799999998874332 110 0 0
Q ss_pred cEEEEEEec-CeEEEEecCC-------------eEEEEEcCcchhhh--hcc-cc-ccccEEEEEEecCCe-E-EEEe--
Q 038568 144 AVSDLVVKQ-GLMYSVSWDR-------------SFKIWNASNYKCLE--SVN-KA-HEDAVNAVVVSDNGV-V-YTGS-- 201 (357)
Q Consensus 144 ~v~~~~~~~-~~l~~~~~dg-------------~i~iwd~~~~~~~~--~~~-~~-~~~~v~~~~~~~~~~-l-~~~~-- 201 (357)
....++|+. +.|+.++.+. .|++|++.++.... .+. .. +......+.++|++. | ++..
T Consensus 176 k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 176 KFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp ESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred eeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 112344544 5666666553 49999998765321 121 22 344578899999994 3 3333
Q ss_pred -CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe-c---CCeEEEEecccCCceeeeeecc
Q 038568 202 -ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-C---DRWIVVWERERDHRMVFAEALW 276 (357)
Q Consensus 202 -~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~---dg~i~vwd~~~~~~~~~~~~~~ 276 (357)
....|+++|+.. .. .....+..+....... +++++..|+..+ . .+.|..+|+.++... ....+.
T Consensus 256 ~~~~~i~~~d~~~------~~---~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~~~~l~ 324 (693)
T 3iuj_A 256 TSGNRLYVKDLSQ------EN---APLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-HWRDLI 324 (693)
T ss_dssp SSCCEEEEEETTS------TT---CCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEEE
T ss_pred CCCcEEEEEECCC------CC---CceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-ccEEEe
Confidence 235899999862 11 1223344444444444 566666555443 3 367999999876531 111233
Q ss_pred CCccceEEEeecCceEEEec-CCC--eEEEeeCCCCcceeeeeeec-CCcCceEEEEEeeCCC
Q 038568 277 GHTGALLCLINVGDLLASGS-ADR--TVRIWQRGKENCYRCMAFLE-GHEKPVKSLVAISSSS 335 (357)
Q Consensus 277 ~~~~~v~~~~~~~~~l~~~~-~dg--~i~vw~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 335 (357)
.|...+..++..++.|+... .++ .|++|++..+. ...+. ...+.+..+.++++++
T Consensus 325 ~~~~~~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~----~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 325 PERQQVLTVHSGSGYLFAEYMVDATARVEQFDYEGKR----VREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp CCCSSCEEEEEETTEEEEEEEETTEEEEEEECTTSCE----EEEECCSSSSEEEECCCCTTCS
T ss_pred cCCCCEEEEEEECCEEEEEEEECCeeEEEEEECCCCe----eEEeecCCCceEEeeecCCCCC
Confidence 34433446677777655554 444 68899887542 22222 2345566777777665
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=2.8e-11 Score=101.16 Aligned_cols=183 Identities=12% Similarity=0.122 Sum_probs=97.3
Q ss_pred ecceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCcc
Q 038568 38 HNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTV 114 (357)
Q Consensus 38 s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 114 (357)
.+..+++++.| .|+.||. .+++.+..+.. +.+.+..+..++ +++++.|+.|..||..+++..........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~-~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~- 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSK-RTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP- 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEET-TTCCEEEEEEC-----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-
T ss_pred eCCEEEEEcCCCEEEEEEC-CCCCEEEEecC-----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-
Confidence 47889999999 9999999 89988877763 334343344444 66678999999999988765433221000
Q ss_pred ccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecC
Q 038568 115 KDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDN 194 (357)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (357)
.. ....++. .....+++++.++.|+.||.++|+.+..+ ..+. ...++|+
T Consensus 81 -~~----------------------~~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w~~-~~~~----~~~~~p~ 129 (369)
T 2hz6_A 81 -EL----------------------VQASPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQTL-SSAF----ADSLSPS 129 (369)
T ss_dssp -HH----------------------HTTCSCC--------CCCCEEEEEEEEECCC------------------------
T ss_pred -cc----------------------cccCceE---ecCCEEEEEeCCCEEEEEECCCCcEEEEe-cCCC----ccccccc
Confidence 00 0011110 01256778888999999999999998887 3322 1234454
Q ss_pred C-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCC---CEEEEEecCCeEEEEecccCCcee
Q 038568 195 G-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG---SLLFSGGCDRWIVVWERERDHRMV 270 (357)
Q Consensus 195 ~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~~~ 270 (357)
+ .+++++.++.|+.||.++. +.... +... ......+.++. ..+++++.||.|+.||.++++...
T Consensus 130 ~~~v~~~~~dg~v~a~d~~tG------~~~W~----~~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W 197 (369)
T 2hz6_A 130 TSLLYLGRTEYTITMYDTKTR------ELRWN----ATYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLW 197 (369)
T ss_dssp ---EEEEEEEEEEECCCSSSS------SCCCE----EEEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEE
T ss_pred CCEEEEEecCCEEEEEECCCC------CEEEe----Eecc--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEE
Confidence 4 6888999999999998732 21111 1111 11222333322 467778899999999999887543
No 232
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.16 E-value=2.9e-08 Score=83.50 Aligned_cols=253 Identities=11% Similarity=0.085 Sum_probs=153.5
Q ss_pred ccccceecccccCCCCCCCccceeEEEEe--cceEEEee----------CC-ceEEEeccCCccccceeccc-cC---CC
Q 038568 10 EAFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAAS----------LN-EINVFDLISDYSHVDTFSND-LS---SS 72 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~----------~d-~i~iw~~~~~~~~~~~~~~~-~~---~~ 72 (357)
+..+.+.+.++.. -..+ .++++ |++|+++. .+ .|.++|. .+.+.+..+... .. ..
T Consensus 105 D~~t~~vv~~I~v-----G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~-~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 105 DGSTGRILGMTDG-----GFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP-VTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp ETTTTEEEEEEEE-----CSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT-TTCCEEEEEEETTCCCCCBS
T ss_pred ECCCCEEEEEEEC-----CCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC-CCCcEEEEEECCCccccccC
Confidence 3455666666664 2234 78898 88787775 35 8999999 888888877531 00 01
Q ss_pred CceEEEEEecCc--eEEeec--CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 73 GSVKSITFHITK--IFTAHQ--DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 73 ~~v~~l~~~~~~--l~~~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
.....++|+||+ ++.+.. ++.|.+.|+.+.+....+... + ...+
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~----------------------------g----~~~~ 224 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP----------------------------D----CYHI 224 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC----------------------------S----EEEE
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC----------------------------C----ceee
Confidence 345578999987 666553 578999999998766554421 0 0111
Q ss_pred EEec-CeEEEEecCCeEEEEEcCcchhhh----hcccccccc-EEEEEEecCC-eEEEEeCCCeEEEEEccccccccccc
Q 038568 149 VVKQ-GLMYSVSWDRSFKIWNASNYKCLE----SVNKAHEDA-VNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERK 221 (357)
Q Consensus 149 ~~~~-~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~-v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~ 221 (357)
.... ..+++.+.||.+.+.+..+++... .+ .....+ ...+.+.+++ .++.....+.+.+.|.....
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~-~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~------ 297 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDFADGETKVTNTEVF-HTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG------ 297 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEECCTTCCEEEECCCC-SCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC------
T ss_pred ccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeee-ccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc------
Confidence 1111 556677788888888885554431 12 111111 1234567776 45555678899999985111
Q ss_pred cceeeeeEee-------c---cccceeEEEEecCCCEEEEEec----------CCeEEEEecccCCceeeeeeccCCccc
Q 038568 222 SRHMLVTTLV-------K---HRSTVNALALNGDGSLLFSGGC----------DRWIVVWERERDHRMVFAEALWGHTGA 281 (357)
Q Consensus 222 ~~~~~~~~~~-------~---~~~~v~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~~~~ 281 (357)
......+. . .......++++|+++.+++... ++.|.++|..+.+.+..+.. +. .
T Consensus 298 --~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v--g~--~ 371 (426)
T 3c75_H 298 --ATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL--GH--E 371 (426)
T ss_dssp --EEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE--EE--E
T ss_pred --eEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC--CC--C
Confidence 00111110 0 0111223789999887777643 35799999998885544432 11 2
Q ss_pred eEEEeec--Cc-eEEEec-CCCeEEEeeCCCCcceeeeeee
Q 038568 282 LLCLINV--GD-LLASGS-ADRTVRIWQRGKENCYRCMAFL 318 (357)
Q Consensus 282 v~~~~~~--~~-~l~~~~-~dg~i~vw~~~~~~~~~~~~~~ 318 (357)
...+.++ ++ ++++.. .++.|.++|+.+. +.+..+
T Consensus 372 P~gia~spDg~~~lyv~n~~s~~VsVID~~t~---kvv~tI 409 (426)
T 3c75_H 372 IDSINVSQDAEPLLYALSAGTQTLHIYDAATG---EELRSV 409 (426)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEETTTC---CEEEEE
T ss_pred cCeEEEccCCCEEEEEEcCCCCeEEEEECCCC---CEEEEe
Confidence 4445555 55 677776 5999999999997 445554
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=4.6e-08 Score=81.52 Aligned_cols=193 Identities=8% Similarity=0.053 Sum_probs=118.3
Q ss_pred cceEEEee-CC-ceEEEeccCCc----cccceecccc----CCCCceEEEEEecCc-eEEeecC------CeEEEEecCC
Q 038568 39 NSLLYAAS-LN-EINVFDLISDY----SHVDTFSNDL----SSSGSVKSITFHITK-IFTAHQD------CKIRVWKITA 101 (357)
Q Consensus 39 ~~~l~t~~-~d-~i~iw~~~~~~----~~~~~~~~~~----~~~~~v~~l~~~~~~-l~~~~~d------~~i~vwd~~~ 101 (357)
+++|++.+ .+ .|.++|+ .+. +..++++... .....-..+...|++ ++++..+ +.|.+.|..+
T Consensus 95 r~~l~v~~l~s~~I~viD~-~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDT-KPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEEC-CSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEEC-CCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCC
Confidence 56666655 45 9999998 543 4445552000 011245667788998 4454444 6899999998
Q ss_pred ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-------------------c
Q 038568 102 SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-------------------W 160 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------------------~ 160 (357)
.+.......-. ....--.++.|+| +.+++.. .
T Consensus 174 ~~v~~~~~~~~---------------------------~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~ 226 (462)
T 2ece_A 174 FEPLGKWEIDR---------------------------GDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY 226 (462)
T ss_dssp CCEEEECCSBC---------------------------TTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred CeEEEEEccCC---------------------------CCccccceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence 87665543211 1111233567777 6666663 3
Q ss_pred CCeEEEEEcCcchhhhhcccc-ccccEEEEEE--ecCCe--EEEEe-----CCCeEEEEEccccccccccccceeeeeE-
Q 038568 161 DRSFKIWNASNYKCLESVNKA-HEDAVNAVVV--SDNGV--VYTGS-----ADGRIRVWERSVVDHNKERKSRHMLVTT- 229 (357)
Q Consensus 161 dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~--~~~~~--l~~~~-----~d~~i~i~d~~~~~~~~~~~~~~~~~~~- 229 (357)
+.+|.+||+.+++.+.++..+ .......+.| +|++. ++++- .+++|.+|.... + .......
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~------g--~~~~~~vI 298 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED------G--KWNAEKVI 298 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET------T--EEEEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC------C--ceeEEEEE
Confidence 789999999988877777332 2234555656 89983 44444 667888877641 1 1111111
Q ss_pred -eec----------------cccceeEEEEecCCCEEEEEec-CCeEEEEecccCC
Q 038568 230 -LVK----------------HRSTVNALALNGDGSLLFSGGC-DRWIVVWERERDH 267 (357)
Q Consensus 230 -~~~----------------~~~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~ 267 (357)
+.. -......+.+++||++|.++.. .+.|.+||+....
T Consensus 299 di~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~ 354 (462)
T 2ece_A 299 EIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPF 354 (462)
T ss_dssp EECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTT
T ss_pred eCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCC
Confidence 000 0234678999999998888765 7889999986443
No 234
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.14 E-value=1.2e-06 Score=81.07 Aligned_cols=271 Identities=10% Similarity=0.164 Sum_probs=167.6
Q ss_pred CccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccc-----cCCCCceEEEEEecCc-eEEeecCCeEEEEec
Q 038568 28 HHMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSND-----LSSSGSVKSITFHITK-IFTAHQDCKIRVWKI 99 (357)
Q Consensus 28 h~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~ 99 (357)
+...|.++... ...|..|+.+ -+..||. .+.+.. .+... .-....|.++...+++ |..|+.+ -|.+|+.
T Consensus 213 ~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~-~~~~~~-~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~ 289 (795)
T 4a2l_A 213 GTKQIQAILQQSPTRIWVATEGAGLFLINP-KTKEIK-NYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHE 289 (795)
T ss_dssp -CCCEEEEEEEETTEEEEEEBSSCEEEEET-TTTEEE-EECCCTTCTTSCSCSBEEEEEECTTSCEEEEESS-CEEEEET
T ss_pred CCCeeEEEEEcCCCCEEEEECCCCeEEEeC-CCCeEE-EeecCCCCccccCCCeEEEEEEcCCCCEEEEeCC-hhheEcC
Confidence 34568888887 5667777766 8999998 654332 22210 0124679999988777 7777766 5888998
Q ss_pred CCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhc
Q 038568 100 TASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESV 178 (357)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~ 178 (357)
.+++... +...+... ..-....|.++...+ ..|..|+.++-|..++..+.+.. .+
T Consensus 290 ~~~~~~~-~~~~~~~~----------------------~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~ 345 (795)
T 4a2l_A 290 GTDSFAS-YSSNPVEN----------------------GSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFK-NI 345 (795)
T ss_dssp TTTEEEE-ECCCTTST----------------------TSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSE-EE
T ss_pred CCCeEEE-EecCCCCC----------------------CCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccce-EE
Confidence 7654322 11100000 002346799999988 88888998888999987654321 11
Q ss_pred c------ccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEe------eccccceeEEEEecCC
Q 038568 179 N------KAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL------VKHRSTVNALALNGDG 246 (357)
Q Consensus 179 ~------~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~ 246 (357)
. ......|.++...+++.|..|+.++-|..||... .. ....... ......|.++...+++
T Consensus 346 ~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~------~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 417 (795)
T 4a2l_A 346 RNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPIT------QR--FTSYTLQEDESARGIGSNNIKAVYVDEKK 417 (795)
T ss_dssp CCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTT------CC--EEEECCC------CCSCSCEEEEEEETTT
T ss_pred cCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCC------Cc--EEEEecCCCCcccCCCCccEEEEEEcCCC
Confidence 0 1124569999999999888899988899998761 11 1111000 0123568999998888
Q ss_pred CEEEEEecCCeEEEEecccCCceeeeee-ccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeee----cC
Q 038568 247 SLLFSGGCDRWIVVWERERDHRMVFAEA-LWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFL----EG 320 (357)
Q Consensus 247 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~ 320 (357)
+.|..|+.++-|.+||..+++....... .......|.++..+++ .|..|+.+ -+.+||..+++ ....... ..
T Consensus 418 ~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~-Gl~~~~~~~~~-~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 418 SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLS-ALVRFNPEQRS-FTTIEKEKDGTPV 495 (795)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESS-CEEEEETTTTE-EEECCBCTTCCBC
T ss_pred CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecC-ceeEEeCCCCe-EEEcccccccccc
Confidence 8577777777799999887652211110 0013456788877755 55555554 48889987752 1111111 11
Q ss_pred CcCceEEEEEeeCCC
Q 038568 321 HEKPVKSLVAISSSS 335 (357)
Q Consensus 321 h~~~v~~~~~~~~~~ 335 (357)
....|.++...+++.
T Consensus 496 ~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 496 VSKQITTLFRDSHKR 510 (795)
T ss_dssp CCCCEEEEEECTTCC
T ss_pred CCceEEEEEECCCCC
Confidence 235788998888876
No 235
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.07 E-value=7.9e-07 Score=82.03 Aligned_cols=266 Identities=10% Similarity=0.046 Sum_probs=162.0
Q ss_pred ccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceecc-------ccCCCCceEEEEEecCc-eEEeecCCeEEEEe
Q 038568 29 HMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSN-------DLSSSGSVKSITFHITK-IFTAHQDCKIRVWK 98 (357)
Q Consensus 29 ~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~-------~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd 98 (357)
...|.++..+ ...|..|+.+ -|..++. .... ...+.. ..-....|.++...+++ |..|+.++-|..|+
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~~~-~~~~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFISN-APPT-FHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFE 389 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEECS-SCCS-CEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEE
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEeCC-CCCc-ceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEE
Confidence 4679999888 6678888877 8999987 5432 222210 00134579999988866 88888777799999
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhh
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLES 177 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~ 177 (357)
..++..... .... ......|.++...+ ..|..|+.++-|..+|..+++....
T Consensus 390 ~~~~~~~~~-~~~~--------------------------~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 390 NGKRVAIYN-KENR--------------------------ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp TTEEEEECC--------------------------------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEEC
T ss_pred CCCCeEEEc-cCCC--------------------------CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEe
Confidence 765432111 0000 02346788998887 7788888877899999876643221
Q ss_pred cc-ccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEee---ccccceeEEEEecCCCEEEEEe
Q 038568 178 VN-KAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV---KHRSTVNALALNGDGSLLFSGG 253 (357)
Q Consensus 178 ~~-~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~ 253 (357)
.. ......|.++...+++.|..|+. +.|..||..... ........ .....|.++...++|++.+ |+
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt 512 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKK--------VIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GT 512 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSS--------CCEEECTTTSSCSCSCEEEEEECTTCCEEE-EE
T ss_pred ccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCe--------EEecccCcccccccceeEEEEEcCCCCEEE-EE
Confidence 10 12346789999988888777777 668888876211 11111000 1135788999888887554 45
Q ss_pred cCCeEEEEecccCCceeeeeeccC-CccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecC-CcCceEEEEE
Q 038568 254 CDRWIVVWERERDHRMVFAEALWG-HTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEG-HEKPVKSLVA 330 (357)
Q Consensus 254 ~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-h~~~v~~~~~ 330 (357)
.++-|..||..+.+.. ......+ ....|.++..+++ .|..|+.+|.+..||..+++ ........+ ....|.++..
T Consensus 513 ~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~-~~~~~~~~gl~~~~i~~i~~ 590 (781)
T 3v9f_A 513 FGGGVGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFD-YQVFQRKEGLPNTHIRAISE 590 (781)
T ss_dssp SSSCEEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCC-CEEECGGGTCSCCCCCEEEE
T ss_pred cCCCEEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCc-EEEccccCCCCCceEEEEEE
Confidence 5334888888755321 1111111 2346788877655 55555667765889987653 222211111 2245778888
Q ss_pred eeCCC
Q 038568 331 ISSSS 335 (357)
Q Consensus 331 ~~~~~ 335 (357)
.+++.
T Consensus 591 d~~g~ 595 (781)
T 3v9f_A 591 DKNGN 595 (781)
T ss_dssp CSSSC
T ss_pred CCCCC
Confidence 77775
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.06 E-value=3.1e-08 Score=81.88 Aligned_cols=260 Identities=10% Similarity=-0.036 Sum_probs=154.2
Q ss_pred cccccceecccccCCCCCCCccceeEEEEe--cceEEEee----------CC-ceEEEeccCCccccceeccccCC----
Q 038568 9 SEAFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAAS----------LN-EINVFDLISDYSHVDTFSNDLSS---- 71 (357)
Q Consensus 9 ~~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~----------~d-~i~iw~~~~~~~~~~~~~~~~~~---- 71 (357)
.+..+.+.+.++.. | ..+ .++++ +++++++. .+ .|.+||+ .+++.+.++....+.
T Consensus 51 ID~~t~~v~~~i~v--G---~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~-~T~~vv~~I~v~~~~~~~~ 122 (368)
T 1mda_H 51 SCAGCGVTLGHSLG--A---FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP-VTFLPIADIELPDAPRFSV 122 (368)
T ss_dssp EETTTTEEEEEEEE--C---TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT-TTCCEEEEEEETTSCSCCB
T ss_pred EECCCCeEEEEEeC--C---CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC-CCCCEEEEEECCCcccccc
Confidence 34556777777764 2 334 68998 88888875 35 9999999 999999988641000
Q ss_pred CCceEEEEEecCc--eEEeec--CCeEEE--EecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccE
Q 038568 72 SGSVKSITFHITK--IFTAHQ--DCKIRV--WKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAV 145 (357)
Q Consensus 72 ~~~v~~l~~~~~~--l~~~~~--d~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 145 (357)
......++++||+ ++.+.. +..+.+ +|+.+ ...+.. +. .
T Consensus 123 g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-----------------------------~~--~- 167 (368)
T 1mda_H 123 GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-----------------------------AS--C- 167 (368)
T ss_dssp SCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-----------------------------SS--C-
T ss_pred CCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-----------------------------CC--c-
Confidence 1345689999997 666653 467888 99876 222211 00 0
Q ss_pred EEEEEec-CeEEEEecCCeEEEEEcCc-----chhhh----hccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccc
Q 038568 146 SDLVVKQ-GLMYSVSWDRSFKIWNASN-----YKCLE----SVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVD 215 (357)
Q Consensus 146 ~~~~~~~-~~l~~~~~dg~i~iwd~~~-----~~~~~----~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 215 (357)
..+.... ..+++.+.||.+.+.|+.+ ++... .+ .....+. ....++.++..+. +.+.+.|....
T Consensus 168 ~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i-~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~- 241 (368)
T 1mda_H 168 FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ-NCSSQAA---QANYPGMLVWAVA-SSILQGDIPAA- 241 (368)
T ss_dssp CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTS-CBCSCCE---EETTTTEEEECBS-SCCEEEECCSS-
T ss_pred eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeee-eCCCCcc---ccccCCEEEEEcC-CEEEEEECCCC-
Confidence 0111122 4556677888888889886 54432 22 1222333 3333345555556 99999998511
Q ss_pred cccccccceeeeeEeec-------c---ccceeEEEEecCCCEEEEEec-C--------CeEEEEecccCCceeeeeecc
Q 038568 216 HNKERKSRHMLVTTLVK-------H---RSTVNALALNGDGSLLFSGGC-D--------RWIVVWERERDHRMVFAEALW 276 (357)
Q Consensus 216 ~~~~~~~~~~~~~~~~~-------~---~~~v~~~~~~~~~~~l~~~~~-d--------g~i~vwd~~~~~~~~~~~~~~ 276 (357)
.......+.. + ......++++|+++.++++.. + +.+.++|+.+.+....+..
T Consensus 242 -------~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v-- 312 (368)
T 1mda_H 242 -------GATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-- 312 (368)
T ss_dssp -------CCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE--
T ss_pred -------cceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC--
Confidence 0111111110 0 011122689999998887643 2 3567999998875433322
Q ss_pred CCccceEEEeecCc---eEEEec-CCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEee
Q 038568 277 GHTGALLCLINVGD---LLASGS-ADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAIS 332 (357)
Q Consensus 277 ~~~~~v~~~~~~~~---~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 332 (357)
.. ....+.++++ .+++.. .++.|.++|+.+. +.+..+..... ...+++.+
T Consensus 313 -g~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~---kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 313 -GH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD---QDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp -EE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC---EEEEECCCCSC-CCEEECCC
T ss_pred -CC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC---cEEEEEECCCC-CCEEEeec
Confidence 11 3556666554 566666 5999999999997 66666655433 34555543
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.04 E-value=3.7e-07 Score=76.18 Aligned_cols=225 Identities=8% Similarity=0.018 Sum_probs=128.4
Q ss_pred eEEeecCCeEEEEecCCc-cceeeeeecCccccceeeeecCCCeEEEeccccccccc-ccccEEEEEEec-CeEEEEecC
Q 038568 85 IFTAHQDCKIRVWKITAS-RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLE-HWDAVSDLVVKQ-GLMYSVSWD 161 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~l~~~~~d 161 (357)
++++..+++|.++|+.+. ...+..+.+.... +... ....-..+...| ..++++..+
T Consensus 99 ~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~---------------------~~~~~g~s~Ph~~~~~pdGi~Vs~~g~ 157 (462)
T 2ece_A 99 IVPGLRSSRIYIIDTKPNPREPKIIKVIEPEE---------------------VKKVSGYSRLHTVHCGPDAIYISALGN 157 (462)
T ss_dssp EEEBTTTCCEEEEECCSCTTSCEEEEEECHHH---------------------HHHHHCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEccCCCCeEEEEECCCCCCCceeeeeechhh---------------------cccccCCCcccceeECCCeEEEEcCCC
Confidence 777888999999998644 2223333221000 0000 011223445556 555555444
Q ss_pred ------CeEEEEEcCcchhhhhcccccc--ccEEEEEEecCCe-EEEEe-------------------CCCeEEEEEccc
Q 038568 162 ------RSFKIWNASNYKCLESVNKAHE--DAVNAVVVSDNGV-VYTGS-------------------ADGRIRVWERSV 213 (357)
Q Consensus 162 ------g~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~-l~~~~-------------------~d~~i~i~d~~~ 213 (357)
|.|.++|.++++.+.++..... ..-..+.|+|++. +++.. .+.+|.+||+.
T Consensus 158 ~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~- 236 (462)
T 2ece_A 158 EEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLR- 236 (462)
T ss_dssp TTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETT-
T ss_pred cCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECC-
Confidence 7899999999998888842212 2234578899885 55542 37899999997
Q ss_pred cccccccccceeeeeEeecc--ccceeEEEE--ecCCCEEEEEec------CCeEEEEecccCCceeeeeec--c-----
Q 038568 214 VDHNKERKSRHMLVTTLVKH--RSTVNALAL--NGDGSLLFSGGC------DRWIVVWERERDHRMVFAEAL--W----- 276 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~--~----- 276 (357)
..+....+... ......+.| +|+++++++++. +++|.+|..+.+. ......+ .
T Consensus 237 ---------~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 237 ---------KRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIPAEPLE 306 (462)
T ss_dssp ---------TTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEECCEECC
T ss_pred ---------CCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCCCcccc
Confidence 22344444432 123445655 999998888774 6688877665421 1111110 0
Q ss_pred C-----------CccceEEEee--cCceEEE-ecCCCeEEEeeCCCCcceeeeeeecCCc--------------CceEEE
Q 038568 277 G-----------HTGALLCLIN--VGDLLAS-GSADRTVRIWQRGKENCYRCMAFLEGHE--------------KPVKSL 328 (357)
Q Consensus 277 ~-----------~~~~v~~~~~--~~~~l~~-~~~dg~i~vw~~~~~~~~~~~~~~~~h~--------------~~v~~~ 328 (357)
+ -......+.. ++++|.+ .-..+.|.+||+......+.+..+.... +.-..+
T Consensus 307 ~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~ 386 (462)
T 2ece_A 307 GNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQML 386 (462)
T ss_dssp SSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCE
T ss_pred ccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEE
Confidence 0 0122334444 4455544 4447899999997543345554443221 135789
Q ss_pred EEeeCCCCCCCCeEEEEEcC
Q 038568 329 VAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 329 ~~~~~~~~~~~~~~~l~s~~ 348 (357)
.++||++ +|+++.
T Consensus 387 ~lSpDGk-------~LyVaN 399 (462)
T 2ece_A 387 EISRDGR-------RVYVTN 399 (462)
T ss_dssp EECTTSS-------EEEEEC
T ss_pred EEcCCCC-------EEEEEc
Confidence 9999998 666554
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.02 E-value=4.2e-06 Score=77.38 Aligned_cols=267 Identities=7% Similarity=0.110 Sum_probs=164.7
Q ss_pred eeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceeee
Q 038568 32 ISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLV 108 (357)
Q Consensus 32 i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~ 108 (357)
|.++... ...|..+..+ .|..|+. .+.+....... .....|.++...+++ |..++.++-+..||..+++.....
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~-~~~~~~~~~~~--~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSI-TQKTFEKVIPI--LGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYL 251 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEET-TTCCEEECC------CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEEC
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeC-CCCeEEEecCC--CCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEee
Confidence 8888887 5566667776 8999997 55443222111 145678888887776 777776656889998765432211
Q ss_pred eecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhcc------cc
Q 038568 109 STLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVN------KA 181 (357)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~ 181 (357)
.... .. .......|.++...+ ..+..|+.+ -|.+||..+++...... .-
T Consensus 252 ~~~~-~~----------------------~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l 307 (795)
T 4a2l_A 252 HSPS-NP----------------------KSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSL 307 (795)
T ss_dssp CCTT-CT----------------------TSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTSC
T ss_pred cCCC-Cc----------------------cccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCC
Confidence 1000 00 001235689998887 777777776 58899987654322110 11
Q ss_pred ccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEe----eccccceeEEEEecCCCEEEEEecCCe
Q 038568 182 HEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL----VKHRSTVNALALNGDGSLLFSGGCDRW 257 (357)
Q Consensus 182 ~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~ 257 (357)
....|.++...++|.|..|+.++-|..|+..... ....... ......|.++...++|+ |..|+.++-
T Consensus 308 ~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~--------~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~G 378 (795)
T 4a2l_A 308 SQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNR--------FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGG 378 (795)
T ss_dssp SSSCEEEEEECTTSCEEEEESSSCEEEECGGGGS--------SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSC
T ss_pred CCCcEEEEEEeCCcCEEEEECCCCeEEeCCCccc--------ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCC
Confidence 3467999999999999899998889999875211 1111000 01235688999888876 556777767
Q ss_pred EEEEecccCCceeeeeec-----cCCccceEEEeecCc-e-EEEecCCCeEEEeeCCCCcceeeeeee--cCCcCceEEE
Q 038568 258 IVVWERERDHRMVFAEAL-----WGHTGALLCLINVGD-L-LASGSADRTVRIWQRGKENCYRCMAFL--EGHEKPVKSL 328 (357)
Q Consensus 258 i~vwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~-~-l~~~~~dg~i~vw~~~~~~~~~~~~~~--~~h~~~v~~~ 328 (357)
|..||..++......... .-....|.++..+.+ . |..|+.++-|..||..+++. ...... ......|.++
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i 457 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAI 457 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEE
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEE
Confidence 999998765422111110 012356788877654 5 88888877899999887631 111110 0234578888
Q ss_pred EEeeCCC
Q 038568 329 VAISSSS 335 (357)
Q Consensus 329 ~~~~~~~ 335 (357)
...+++.
T Consensus 458 ~~d~~g~ 464 (795)
T 4a2l_A 458 LPDGEGN 464 (795)
T ss_dssp EECSSSC
T ss_pred EECCCCC
Confidence 8877775
No 239
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.02 E-value=2.6e-08 Score=82.32 Aligned_cols=251 Identities=7% Similarity=-0.066 Sum_probs=148.2
Q ss_pred ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEee----------cCCeEEEEecCCccceeeeeecCcccc
Q 038568 49 EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAH----------QDCKIRVWKITASRQHQLVSTLPTVKD 116 (357)
Q Consensus 49 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~ 116 (357)
.|.+.|. .+++.+.++.. ...+ .+.++|++ ++.+. .++.|.+||+.+.+....+.......
T Consensus 47 ~vsvID~-~t~~v~~~i~v---G~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~- 119 (368)
T 1mda_H 47 ENWVSCA-GCGVTLGHSLG---AFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR- 119 (368)
T ss_dssp EEEEEET-TTTEEEEEEEE---CTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS-
T ss_pred eEEEEEC-CCCeEEEEEeC---CCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc-
Confidence 5669999 99999999986 4455 79999997 55554 47899999999998776664310000
Q ss_pred ceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec--CCeEEE--EEcCcchhhhhccccccccEEEEE
Q 038568 117 RLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW--DRSFKI--WNASNYKCLESVNKAHEDAVNAVV 190 (357)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~v~~~~ 190 (357)
. ........+.++| ++++.+.. +..+.+ +|+.+ +..+.. ... ..
T Consensus 120 --------------------~--~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v--~~~---~~ 169 (368)
T 1mda_H 120 --------------------F--SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS--ASC---FH 169 (368)
T ss_dssp --------------------C--CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC--SSC---CC
T ss_pred --------------------c--ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC--CCc---eE
Confidence 0 0002234678888 67777764 467888 99877 334411 111 12
Q ss_pred EecCC--eEEEEeCCCeEEEEEccccccccccccceeee----eEeeccccceeEEEEecCCCEEEEEecCCeEEEEecc
Q 038568 191 VSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLV----TTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERE 264 (357)
Q Consensus 191 ~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 264 (357)
+.|++ .+++.+.|+.+.+.|+...... ..+.. ..+.....+. . .+++..++..+. +.+.+.|..
T Consensus 170 ~~p~g~~~~~~~~~dg~~~~vd~~~~~~~-----~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~ 239 (368)
T 1mda_H 170 IHPGAAATHYLGSCPASLAASDLAAAPAA-----AGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIP 239 (368)
T ss_dssp CEEEETTEEECCCCTTSCEEEECCSSCCC-----CEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECC
T ss_pred EccCCCeEEEEEcCCCCEEEEECcccccc-----CCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECC
Confidence 33444 4667778899888887620000 01111 0111122333 3 666666666666 899999986
Q ss_pred cCCceeeeeecc------------CCccceEEEeecCceEEEe-c---C-----CCeEEEeeCCCCcceeeeeeecCCcC
Q 038568 265 RDHRMVFAEALW------------GHTGALLCLINVGDLLASG-S---A-----DRTVRIWQRGKENCYRCMAFLEGHEK 323 (357)
Q Consensus 265 ~~~~~~~~~~~~------------~~~~~v~~~~~~~~~l~~~-~---~-----dg~i~vw~~~~~~~~~~~~~~~~h~~ 323 (357)
..... ....+. ........+..+++.++.+ . . ++.+.++|+.+. +.+..+....
T Consensus 240 ~~~~~-v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---~vv~~i~vg~- 314 (368)
T 1mda_H 240 AAGAT-MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---QTSGPISNGH- 314 (368)
T ss_dssp SSCCE-EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---CEEECCEEEE-
T ss_pred CCcce-EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---eEEEEEECCC-
Confidence 53211 111110 0111123455555555443 2 2 235669999987 4444444332
Q ss_pred ceEEEEEeeCCCCCCCCeEEEEEcC-CCCeEEecC
Q 038568 324 PVKSLVAISSSSSASNGIVSIGSGS-LNGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~~~~~~~~~~~l~s~~-~dg~v~~wd 357 (357)
...+++|+|+++ .++++.. .++.|.++|
T Consensus 315 ~p~gi~~s~Dg~------~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 315 DSDAIIAAQDGA------SDNYANSAGTEVLDIYD 343 (368)
T ss_dssp EECEEEECCSSS------CEEEEEETTTTEEEEEE
T ss_pred CcceEEECCCCC------EEEEEccCCCCeEEEEE
Confidence 578999999986 3566666 599999886
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.00 E-value=4.4e-07 Score=70.94 Aligned_cols=193 Identities=7% Similarity=-0.006 Sum_probs=123.9
Q ss_pred cEEEEEEec-CeEEEEec---CCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccc
Q 038568 144 AVSDLVVKQ-GLMYSVSW---DRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 144 ~v~~~~~~~-~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
....+.|++ ..|+.++. ++.|+++|+.+++.+..+..........+++..+...++.-.++.+.++|..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~------- 94 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRR------- 94 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETT-------
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECC-------
Confidence 357889998 66666543 5899999999999888873222223345666643335556678999999987
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCcc---ceEEEeecCc-eEEEe
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG---ALLCLINVGD-LLASG 295 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~l~~~ 295 (357)
..+.+..+..... ....+++|++.++++..++.|.++|..+.+....+..-. ... ....+.+.+. ..+..
T Consensus 95 ---t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~-~~~p~~~~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 95 ---TLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY-NGHRVIRLNELEYINGEVWANI 168 (266)
T ss_dssp ---TTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEETTEEEEEE
T ss_pred ---CCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC-CCcccccceeEEEECCEEEEec
Confidence 3344444432211 224466788877777788999999998877544433211 111 2345555544 44555
Q ss_pred cCCCeEEEeeCCCCcceeeeeeecC----------CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 296 SADRTVRIWQRGKENCYRCMAFLEG----------HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 296 ~~dg~i~vw~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
..++.|.+.|..+++....+..-.. -....++|+|+|+++ ++++++...+.|.+
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~------~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK------RIFVTGKLWPKLFE 232 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT------EEEEEETTCSEEEE
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC------EEEEECCCCCeEEE
Confidence 5688999999999854333332100 013568999999976 57888877777754
No 241
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.99 E-value=3.3e-06 Score=77.96 Aligned_cols=284 Identities=12% Similarity=0.060 Sum_probs=169.5
Q ss_pred ccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceec-----------cccCCCCceEEEEEecCc-eEEeecCCeE
Q 038568 29 HMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFS-----------NDLSSSGSVKSITFHITK-IFTAHQDCKI 94 (357)
Q Consensus 29 ~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~-----------~~~~~~~~v~~l~~~~~~-l~~~~~d~~i 94 (357)
...|.++... ...|..|+.. -|.+++. .+.+...... ...-....|.++...+++ |..|+.++-|
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~-~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl 335 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDL-QQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGI 335 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEET-TCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCE
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECC-CCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeE
Confidence 3568999887 6677778875 8888998 5543221111 001145679999988877 8888878889
Q ss_pred EEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcch
Q 038568 95 RVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYK 173 (357)
Q Consensus 95 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 173 (357)
..++........ +...+... .........|.++...+ ..|..|+.++-|..||..+++
T Consensus 336 ~~~~~~~~~~~~-~~~~~~~~--------------------~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 394 (781)
T 3v9f_A 336 NFISNAPPTFHT-WSYSPTQM--------------------NESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRV 394 (781)
T ss_dssp EEECSSCCSCEE-EC----CC--------------------CSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEE
T ss_pred EEeCCCCCccee-eccCcccc--------------------ccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCe
Confidence 999887554221 11100000 00002235688998888 788888877779999987654
Q ss_pred hhhhcc--ccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEee---ccccceeEEEEecCCCE
Q 038568 174 CLESVN--KAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV---KHRSTVNALALNGDGSL 248 (357)
Q Consensus 174 ~~~~~~--~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~ 248 (357)
...... ......|.++...+++.|..|..++.+..+|.+. .. ...+. .....|.++...++++
T Consensus 395 ~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~----------~~-~~~~~~~~~~~~~v~~i~~d~~g~- 462 (781)
T 3v9f_A 395 AIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL----------KK-FQIIELEKNELLDVRVFYEDKNKK- 462 (781)
T ss_dssp EECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS----------CE-EEECCSTTTCCCCEEEEEECTTSE-
T ss_pred EEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC----------Cc-EEEeccCCCCCCeEEEEEECCCCC-
Confidence 322110 1234678999988888888888878888888751 11 11111 1345788888888776
Q ss_pred EEEEecCCeEEEEecccCCceeeeeecc---CCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeec-CCcC
Q 038568 249 LFSGGCDRWIVVWERERDHRMVFAEALW---GHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLE-GHEK 323 (357)
Q Consensus 249 l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~h~~ 323 (357)
|..|+.+ -|..||..+++... ..... .....|.++..+.+ .|..|+.++-|..||..+++ .+...... ....
T Consensus 463 lwigt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~ 539 (781)
T 3v9f_A 463 IWIGTHA-GVFVIDLASKKVIH-HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSN 539 (781)
T ss_dssp EEEEETT-EEEEEESSSSSCCE-EECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE-EEEECTTTTCSCS
T ss_pred EEEEECC-ceEEEeCCCCeEEe-cccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCC
Confidence 4455554 58999987654321 11111 11356788877765 66666664447788887642 11111111 1245
Q ss_pred ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 324 PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.|.++...+++. +.++.. +|.|..||
T Consensus 540 ~i~~i~~d~~g~-------lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 540 TINQIYRSSKGQ-------MWLATG-EGLVCFPS 565 (781)
T ss_dssp CEEEEEECTTSC-------EEEEET-TEEEEESC
T ss_pred eeEEEEECCCCC-------EEEEEC-CCceEEEC
Confidence 688888888876 444333 66545554
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.99 E-value=8.8e-07 Score=69.25 Aligned_cols=206 Identities=11% Similarity=0.063 Sum_probs=136.4
Q ss_pred cccceecccccCCCCCCCccc--eeEEEEec-ceEEEe-eC--C-ceEEEeccCCccccceeccccCCCCceEEEEEecC
Q 038568 11 AFKHHCIASLKIPSPDPHHMI--ISCLAVHN-SLLYAA-SL--N-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT 83 (357)
Q Consensus 11 ~~~~~~~~~~~~~~g~~h~~~--i~~~~~s~-~~l~t~-~~--d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 83 (357)
..+.+.++++. |... ...++|++ ..|+.+ +. + .|++.|+ .+++.+..+... .......+++..+
T Consensus 6 ~~~~~vv~~~p------~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~-~tg~v~~~i~l~--~~~fgeGi~~~g~ 76 (266)
T 2iwa_A 6 VYIVEVLNEFP------HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVAL-QTGKVENIHKMD--DSYFGEGLTLLNE 76 (266)
T ss_dssp EEEEEEEEEEE------CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEET-TTCCEEEEEECC--TTCCEEEEEEETT
T ss_pred ccCceEEEEEE------CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEEC-CCCCEEEEEecC--CCcceEEEEEeCC
Confidence 34667777887 6643 67999992 455544 32 5 9999999 999988887631 2223346777776
Q ss_pred c-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCC
Q 038568 84 K-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDR 162 (357)
Q Consensus 84 ~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 162 (357)
. .++.-.++.+.++|..+.+....+.. + ...=..++...+.++.+..++
T Consensus 77 ~lyv~t~~~~~v~viD~~t~~v~~~i~~-----------------------------g-~~~g~glt~Dg~~l~vs~gs~ 126 (266)
T 2iwa_A 77 KLYQVVWLKNIGFIYDRRTLSNIKNFTH-----------------------------Q-MKDGWGLATDGKILYGSDGTS 126 (266)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEEC-----------------------------C-SSSCCEEEECSSSEEEECSSS
T ss_pred EEEEEEecCCEEEEEECCCCcEEEEEEC-----------------------------C-CCCeEEEEECCCEEEEECCCC
Confidence 6 44555688999999998876655432 1 011133555555566666789
Q ss_pred eEEEEEcCcchhhhhccccc-c---ccEEEEEEecCCeEEEE-eCCCeEEEEEccccccccccccceeeeeEeecc----
Q 038568 163 SFKIWNASNYKCLESVNKAH-E---DAVNAVVVSDNGVVYTG-SADGRIRVWERSVVDHNKERKSRHMLVTTLVKH---- 233 (357)
Q Consensus 163 ~i~iwd~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~---- 233 (357)
.|.++|..+.+.+..+.... . ..++.+.+. ++++.+. ..++.|.+.|.. ..+.+..+...
T Consensus 127 ~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~----------tg~V~~~I~~~g~~~ 195 (266)
T 2iwa_A 127 ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAK----------DGTLLGWILLPNLRK 195 (266)
T ss_dssp EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETT----------TCCEEEEEECHHHHH
T ss_pred eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECC----------CCcEEEEEECCCccc
Confidence 99999999988877773221 1 236788888 6765444 467899999998 23333333211
Q ss_pred ---------ccceeEEEEecCCC-EEEEEecCCeEEEEecccC
Q 038568 234 ---------RSTVNALALNGDGS-LLFSGGCDRWIVVWERERD 266 (357)
Q Consensus 234 ---------~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 266 (357)
....+.++|+|+++ +++++...+.+.+.++...
T Consensus 196 ~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 196 KLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 13468999999886 4555657888999988754
No 243
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=1.8e-07 Score=84.33 Aligned_cols=195 Identities=12% Similarity=0.142 Sum_probs=116.5
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCC-------Cce-EEEEEecCceEEeecCCeEEEEecCCccceeeee
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSS-------GSV-KSITFHITKIFTAHQDCKIRVWKITASRQHQLVS 109 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~-------~~v-~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 109 (357)
+..+++++.+ .|..+|. .+++.+-.+....... ..+ ..+++..+.++.++.|+.|..+|..+++..-...
T Consensus 66 ~g~vyv~~~~~~v~AlD~-~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~ 144 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDA-ASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQ 144 (668)
T ss_dssp TTEEEEEEGGGEEEEEET-TTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCeEEEEEC-CCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeec
Confidence 6677777778 9999999 8888877665311000 001 2234455568888999999999999998765544
Q ss_pred ecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEec------CCeEEEEEcCcchhhhhccccc-
Q 038568 110 TLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSW------DRSFKIWNASNYKCLESVNKAH- 182 (357)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~- 182 (357)
....... +.....++ .....++.+.. +|.|..+|.++++.+..+....
T Consensus 145 ~~~~~~~---------------------~~~~~~P~----v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~ 199 (668)
T 1kv9_A 145 TTDPAKP---------------------YSITGAPR----VVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPG 199 (668)
T ss_dssp CSCTTSS---------------------CBCCSCCE----EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCC
T ss_pred cCCCCCc---------------------ceecCCCE----EECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCC
Confidence 3110000 00001111 12345555543 5889999999998877662110
Q ss_pred -----------------------------cccEEEEEEecCC-eEEEEeCCC-------------------eEEEEEccc
Q 038568 183 -----------------------------EDAVNAVVVSDNG-VVYTGSADG-------------------RIRVWERSV 213 (357)
Q Consensus 183 -----------------------------~~~v~~~~~~~~~-~l~~~~~d~-------------------~i~i~d~~~ 213 (357)
......+++.|+. .++.+..++ .|..+|.++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t 279 (668)
T 1kv9_A 200 DPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT 279 (668)
T ss_dssp CTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT
T ss_pred CCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC
Confidence 0111246777754 677776665 388888872
Q ss_pred cccccccccceeeeeEeec--cc-------cceeEEEEecCCC---EEEEEecCCeEEEEecccCCce
Q 038568 214 VDHNKERKSRHMLVTTLVK--HR-------STVNALALNGDGS---LLFSGGCDRWIVVWERERDHRM 269 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~ 269 (357)
.+.+-.+.. |. .+.....+..+|+ .++.++.+|.++++|..+++.+
T Consensus 280 ----------G~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 280 ----------GKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp ----------CCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ----------CceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 223322221 21 2222233334665 6889999999999999998865
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.96 E-value=3.9e-07 Score=70.41 Aligned_cols=185 Identities=9% Similarity=-0.030 Sum_probs=120.1
Q ss_pred ccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccc
Q 038568 143 DAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERK 221 (357)
Q Consensus 143 ~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 221 (357)
.-...+.|+. .++.+.+.+|.|+++|+++++.+..+ ......-..+++..+...+..-.++.+.+||..
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~--------- 124 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGM--------- 124 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETT---------
T ss_pred cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECC---------
Confidence 3456788888 66777788899999999999988876 333322344666555445556678999999987
Q ss_pred cceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCcc---ceEEEeecCc-eEEEecC
Q 038568 222 SRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTG---ALLCLINVGD-LLASGSA 297 (357)
Q Consensus 222 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~l~~~~~ 297 (357)
..+.+.++... ..-..++ ++++.|+.+..++.|.++|..+.+....+.... +.. .+..+.|... ..+..-.
T Consensus 125 -Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~-~g~~v~~lNeLe~~dG~lyanvw~ 199 (268)
T 3nok_A 125 -PPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL-RGQPVELINELECANGVIYANIWH 199 (268)
T ss_dssp -TTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEETTEEEEEETT
T ss_pred -cCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC-CCcccccccccEEeCCEEEEEECC
Confidence 34455555432 2223444 567888888789999999999887554443322 222 2345566544 4444446
Q ss_pred CCeEEEeeCCCCcceeeeeee----------cCCcCceEEEEEeeCCCCCCCCeEEEEEcC
Q 038568 298 DRTVRIWQRGKENCYRCMAFL----------EGHEKPVKSLVAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 298 dg~i~vw~~~~~~~~~~~~~~----------~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~ 348 (357)
++.|.+.|..+++....+..- ..-..-.++|+++|+.+ ++++||-
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~------rlfVTGK 254 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG------RIFMTGK 254 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC------CEEEEET
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC------EEEEeCC
Confidence 889999999998543333321 01124578999999866 3677764
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.95 E-value=5.8e-07 Score=69.44 Aligned_cols=186 Identities=10% Similarity=0.014 Sum_probs=115.5
Q ss_pred cEEEEEEec-CeEEEEecCC--eEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEcccccccccc
Q 038568 144 AVSDLVVKQ-GLMYSVSWDR--SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKER 220 (357)
Q Consensus 144 ~v~~~~~~~-~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 220 (357)
-...+.|+. .++.+.+.+| .|+++|+++++.+..+.......-..++...+...+..-.++.+.+||..
T Consensus 44 ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~-------- 115 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIR-------- 115 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT--------
T ss_pred ccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECc--------
Confidence 346778877 5556666665 89999999999888873322222234555444334555568999999987
Q ss_pred ccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeecc-CCc-cceEEEeecCc-eEEEecC
Q 038568 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW-GHT-GALLCLINVGD-LLASGSA 297 (357)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~-~~v~~~~~~~~-~l~~~~~ 297 (357)
..+.+.++.... ....++++++.|+.+..++.|.++|..+.+....+.... +.. ..+..+.+... ..+..-.
T Consensus 116 --t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~ 190 (262)
T 3nol_A 116 --NLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ 190 (262)
T ss_dssp --TCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred --cCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc
Confidence 344555554322 223444677777777778889999999877554443321 111 22334555444 4455556
Q ss_pred CCeEEEeeCCCCcceeeeee--ec-------CCcCceEEEEEeeCCCCCCCCeEEEEEcC
Q 038568 298 DRTVRIWQRGKENCYRCMAF--LE-------GHEKPVKSLVAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 298 dg~i~vw~~~~~~~~~~~~~--~~-------~h~~~v~~~~~~~~~~~~~~~~~~l~s~~ 348 (357)
++.|.+.|..+++....+.. +. .-....++|+|+|+.+ ++++||-
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~------~lfVTGK 244 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH------RLFVTGK 244 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT------EEEEEET
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC------EEEEECC
Confidence 88999999999854433332 11 1123568999999877 4566653
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.93 E-value=1.5e-06 Score=66.59 Aligned_cols=186 Identities=11% Similarity=-0.004 Sum_probs=116.6
Q ss_pred ccEEEEEEec-CeEEEEecC--CeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccc
Q 038568 143 DAVSDLVVKQ-GLMYSVSWD--RSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 143 ~~v~~~~~~~-~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
.-...+.|++ .++.+.+.+ +.|+.+|+.+++.+..+.......-..++...+......-.++.+.+||..
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~------- 93 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA------- 93 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT-------
T ss_pred cccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC-------
Confidence 4566888988 445555554 489999999999888773222222234555544345556678999999987
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCc---cceEEEeecCc-eEEEe
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHT---GALLCLINVGD-LLASG 295 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~-~l~~~ 295 (357)
..+.+.++..... ...+.+++..|+.+..++.|.++|..+.+....+..-. +. ..+..+.+.+. ..+..
T Consensus 94 ---tl~~~~ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~-~g~~~~~lNeLe~~~G~lyanv 166 (243)
T 3mbr_X 94 ---TLTPRARFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA-GGRPLDNLNELEWVNGELLANV 166 (243)
T ss_dssp ---TTEEEEEEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEE-TTEECCCEEEEEEETTEEEEEE
T ss_pred ---cCcEEEEEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc-CCcccccceeeEEeCCEEEEEE
Confidence 3445555543222 23334667777777778999999999877554443321 22 22345566554 44444
Q ss_pred cCCCeEEEeeCCCCcceeeeeeec----------CCcCceEEEEEeeCCCCCCCCeEEEEEcC
Q 038568 296 SADRTVRIWQRGKENCYRCMAFLE----------GHEKPVKSLVAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 296 ~~dg~i~vw~~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~~~~~~l~s~~ 348 (357)
-.+..|.+.|..+++....+..-. .-..-.++|+++|+.+ ++++||-
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~------~lfVTGK 223 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD------RLFVTGK 223 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT------EEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC------EEEEECC
Confidence 467799999999985433332110 1123578999999876 4666663
No 247
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.90 E-value=1.4e-05 Score=65.44 Aligned_cols=277 Identities=8% Similarity=-0.050 Sum_probs=146.9
Q ss_pred ccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccc-cCCCCceEEEEEecCceEEeecCCeEEEEecCCccc
Q 038568 29 HMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSND-LSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQ 104 (357)
Q Consensus 29 ~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~ 104 (357)
...+.+|.|. +..+++ +.+ .| +... +.++.-...... ......+.+|.|.++.++.++.++.|.. ..+.++.
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~-DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATL-METR-DGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEE-EEES-STTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEE-ESSTTSS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeE-EEeC-CCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEE-ECCCCCC
Confidence 4579999997 555664 445 54 3333 444433332210 0134578999998866555666675443 3333443
Q ss_pred eeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhhcccccc
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLESVNKAHE 183 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 183 (357)
...+.... .+...+..+.+.+ ..++.++.+|.|..- ...++.-........
T Consensus 111 W~~~~~~~---------------------------~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~ 162 (327)
T 2xbg_A 111 WSQIPLDP---------------------------KLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEAI 162 (327)
T ss_dssp CEECCCCT---------------------------TCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSCC
T ss_pred ceECcccc---------------------------CCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCCC
Confidence 33322110 1223355666655 545555556654321 122332222223345
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEE-EccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEe
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVW-ERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWE 262 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~-d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 262 (357)
..+..+.+.+++.++..+.+|.+..- |-. ....+.+. ......+..+.+.++++.++ ++.+|.+++.+
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g--------G~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPG--------QTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSD 231 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTT--------CSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEE
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCC--------CCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEec
Confidence 57889999998865555556655433 310 01222221 23445678899999887554 45678887764
Q ss_pred cccCCceeeeeec-cCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCC
Q 038568 263 RERDHRMVFAEAL-WGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNG 340 (357)
Q Consensus 263 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 340 (357)
.+.++........ ......+..+.+.++ .++.++.+|.| ++....++.+..+.........+.++.|.+++
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~------ 304 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD------ 304 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT------
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC------
Confidence 3323322222111 112234677777654 44445557766 45556565555444322334567889898655
Q ss_pred eEEEEEcCCCCeEEecC
Q 038568 341 IVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 341 ~~~l~s~~~dg~v~~wd 357 (357)
.++.++.+|.|.-++
T Consensus 305 --~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 305 --QGFILGQKGILLRYV 319 (327)
T ss_dssp --EEEEECSTTEEEEEC
T ss_pred --ceEEEcCCceEEEEc
Confidence 466666789887653
No 248
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.85 E-value=2.8e-06 Score=76.64 Aligned_cols=269 Identities=11% Similarity=0.089 Sum_probs=147.2
Q ss_pred EEEecceEEEeeCC-ceEEEeccCCccccceeccccCC-CCceEE-EEEecCceEEeec------CCeEEEEecCCccce
Q 038568 35 LAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSS-SGSVKS-ITFHITKIFTAHQ------DCKIRVWKITASRQH 105 (357)
Q Consensus 35 ~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~-l~~~~~~l~~~~~------d~~i~vwd~~~~~~~ 105 (357)
+++.+..+++++.| .|..+|. .+++.+-.+...... ...+.+ -....+.++.+.. +|.|..+|..+++..
T Consensus 113 ~~~~~~~v~v~~~dg~l~alD~-~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 113 VALWGDKVYVGTLDGRLIALDA-KTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp CEEEBTEEEEECTTSEEEEEET-TTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred eEEECCEEEEEcCCCEEEEEEC-CCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 34456778888888 9999999 888888776541100 011111 1122344555543 589999999999876
Q ss_pred eeeeecCccccceeeeecCCCeEEEec---ccccccc--cccccEEEEEEec--CeEEEEecCC----------------
Q 038568 106 QLVSTLPTVKDRLIRSVLPNNYVTVRR---HKKRLWL--EHWDAVSDLVVKQ--GLMYSVSWDR---------------- 162 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~v~~~~~~~--~~l~~~~~dg---------------- 162 (357)
-.....+........ ...+.... .....|. +.......+++.+ ++++.++.++
T Consensus 192 W~~~~~~~~p~~~~~----~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l 267 (668)
T 1kv9_A 192 WRFYTVPGDPALPYE----HPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNL 267 (668)
T ss_dssp EEEESSCCCTTSCCS----SHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred EEecccCCCCCcccc----ccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 665542211100000 00000000 0000000 1112223467776 7777777665
Q ss_pred ---eEEEEEcCcchhhhhcccc-cc-------ccEEEEEEecCC----eEEEEeCCCeEEEEEcccccccccccc-----
Q 038568 163 ---SFKIWNASNYKCLESVNKA-HE-------DAVNAVVVSDNG----VVYTGSADGRIRVWERSVVDHNKERKS----- 222 (357)
Q Consensus 163 ---~i~iwd~~~~~~~~~~~~~-~~-------~~v~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~~~~----- 222 (357)
.|..+|.++++.+..++.. |. .+.....+..++ .++.++.+|.++++|..+++.......
T Consensus 268 ~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w 347 (668)
T 1kv9_A 268 YLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTW 347 (668)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCS
T ss_pred eeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccc
Confidence 4999999999988777432 11 233333333455 388899999999999874332200000
Q ss_pred -------ceeeee------------Eeeccc--cceeEEEEecCCCEEEEEe----------------------------
Q 038568 223 -------RHMLVT------------TLVKHR--STVNALALNGDGSLLFSGG---------------------------- 253 (357)
Q Consensus 223 -------~~~~~~------------~~~~~~--~~v~~~~~~~~~~~l~~~~---------------------------- 253 (357)
...++. .+.+.. ..-..++++|+..++++..
T Consensus 348 ~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 427 (668)
T 1kv9_A 348 AEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFAD 427 (668)
T ss_dssp EEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGG
T ss_pred ccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccc
Confidence 000000 000000 0011267888766655421
Q ss_pred --------cCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCc
Q 038568 254 --------CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 254 --------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 310 (357)
.+|.|..||+.+++......... ...-..+...+.+++.++.||.++.||.++++
T Consensus 428 ~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~--~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 428 ATDVPAAVVSGALLAWDPVKQKAAWKVPYPT--HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp CCCCCGGGCEEEEEEEETTTTEEEEEEEESS--SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cCCCCCCCccceEEEEeCCCCcEEEEccCCC--CCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 24789999999987654333211 11113445567788899999999999999984
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.84 E-value=7.2e-06 Score=72.40 Aligned_cols=271 Identities=8% Similarity=-0.042 Sum_probs=139.9
Q ss_pred EEEecceEEEeeCC-ceEEEeccCCccccceeccccCCC--CceE-EEEEecCceEEeec------CCeEEEEecCCccc
Q 038568 35 LAVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSS--GSVK-SITFHITKIFTAHQ------DCKIRVWKITASRQ 104 (357)
Q Consensus 35 ~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~--~~v~-~l~~~~~~l~~~~~------d~~i~vwd~~~~~~ 104 (357)
+++.+..+++++.| .+..+|. .+++.+-.+.... +. ..+. .-....+.++.++. ++.|..+|..+++.
T Consensus 111 ~~~~~~~v~v~~~dg~l~alD~-~tG~~~W~~~~~~-~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 111 LAYGAGQIVKKQANGHLLALDA-KTGKINWEVEVCD-PKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp CEEETTEEEEECTTSEEEEEET-TTCCEEEEEECCC-GGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred cEEECCEEEEEeCCCEEEEEEC-CCCCEEEEecCCC-CCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 34457778888888 9999999 8888876655311 10 0111 11122344666654 78999999999987
Q ss_pred eeeeeecCccccceeeeecCCCeEEE--eccccccc-----ccccccE-EEEEEec--CeEEEEecC-------------
Q 038568 105 HQLVSTLPTVKDRLIRSVLPNNYVTV--RRHKKRLW-----LEHWDAV-SDLVVKQ--GLMYSVSWD------------- 161 (357)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~v-~~~~~~~--~~l~~~~~d------------- 161 (357)
.-........................ .......| ..-...+ ..+++.+ ..++.+..+
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCc
Confidence 66554432110000000000000000 00000000 0000011 1234444 455555432
Q ss_pred ---CeEEEEEcCcchhhhhccccc---------cccEEEEEEecCC---e-EEEEeCCCeEEEEEccccccccccccc--
Q 038568 162 ---RSFKIWNASNYKCLESVNKAH---------EDAVNAVVVSDNG---V-VYTGSADGRIRVWERSVVDHNKERKSR-- 223 (357)
Q Consensus 162 ---g~i~iwd~~~~~~~~~~~~~~---------~~~v~~~~~~~~~---~-l~~~~~d~~i~i~d~~~~~~~~~~~~~-- 223 (357)
+.|..+|.++++.+..++..+ ..++. +....+| . ++.++.+|.+.++|..+.+........
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 369999999999877763221 12221 2222466 2 667888999999998743321110000
Q ss_pred -----------eeeee--------------Eeeccc--cceeEEEEecCCCEEEEEe-----------------------
Q 038568 224 -----------HMLVT--------------TLVKHR--STVNALALNGDGSLLFSGG----------------------- 253 (357)
Q Consensus 224 -----------~~~~~--------------~~~~~~--~~v~~~~~~~~~~~l~~~~----------------------- 253 (357)
..++. ...... ..-..++++|+..++++..
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 00000 000000 0002467888777776654
Q ss_pred --------------cCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCc
Q 038568 254 --------------CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 254 --------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 310 (357)
.+|.|..||+.+++.......... ..-..+...+..++.++.||.|+.+|.++++
T Consensus 428 ~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~--~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA--AWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC--CCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC--ccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 357899999998875443332111 1111223346677789999999999999984
No 250
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=4.4e-06 Score=64.57 Aligned_cols=191 Identities=12% Similarity=0.098 Sum_probs=125.2
Q ss_pred cceecccccCCCCCCCccc--eeEEEEe-cceEEEeeC--C-ceEEEeccCCccccceeccccCCCCc-eEEEEEecCce
Q 038568 13 KHHCIASLKIPSPDPHHMI--ISCLAVH-NSLLYAASL--N-EINVFDLISDYSHVDTFSNDLSSSGS-VKSITFHITKI 85 (357)
Q Consensus 13 ~~~~~~~~~~~~g~~h~~~--i~~~~~s-~~~l~t~~~--d-~i~iw~~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~l 85 (357)
..+.++++. |... ...|.|+ +.++.+.+. . .|+++|+ ++++.++.+.. .... -..++...+.|
T Consensus 30 ~~~vv~~~p------hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~-~Tgkv~~~~~l---~~~~FgeGit~~g~~l 99 (262)
T 3nol_A 30 DYQIVHSYP------HDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDI-ESGKTLQQIEL---GKRYFGEGISDWKDKI 99 (262)
T ss_dssp EEEEEEEEE------CCTTCEEEEEEEETTEEEEEEEETTEEEEEEECT-TTCCEEEEEEC---CTTCCEEEEEEETTEE
T ss_pred ceEEEEEec------CCCCcccceEEEECCEEEEECCCCCCceEEEEEC-CCCcEEEEEec---CCccceeEEEEeCCEE
Confidence 456666665 6544 5889999 655555553 2 8999999 99999888864 2222 23466666764
Q ss_pred E-EeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeE
Q 038568 86 F-TAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSF 164 (357)
Q Consensus 86 ~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i 164 (357)
+ ..-.++.+.++|..+.+....+... + .=..+++..+.|+.+..++.|
T Consensus 100 y~ltw~~~~v~v~D~~t~~~~~ti~~~----------------------------~---eG~glt~dg~~L~~SdGs~~i 148 (262)
T 3nol_A 100 VGLTWKNGLGFVWNIRNLRQVRSFNYD----------------------------G---EGWGLTHNDQYLIMSDGTPVL 148 (262)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECS----------------------------S---CCCCEEECSSCEEECCSSSEE
T ss_pred EEEEeeCCEEEEEECccCcEEEEEECC----------------------------C---CceEEecCCCEEEEECCCCeE
Confidence 4 4446889999999998876665431 1 113445555666666667889
Q ss_pred EEEEcCcchhhhhccccc-c---ccEEEEEEecCCeEEEEe-CCCeEEEEEccccccccccccceeeeeEeec-------
Q 038568 165 KIWNASNYKCLESVNKAH-E---DAVNAVVVSDNGVVYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTLVK------- 232 (357)
Q Consensus 165 ~iwd~~~~~~~~~~~~~~-~---~~v~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~------- 232 (357)
.++|..+.+.+..+.... . ..++.+.+. +|++.+.. .++.|.+.|.+++ +.+..+..
T Consensus 149 ~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG----------~V~~~Id~~~L~~~~ 217 (262)
T 3nol_A 149 RFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETG----------KVTGIIDLNGILAEA 217 (262)
T ss_dssp EEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTC----------BEEEEEECTTGGGGS
T ss_pred EEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCC----------cEEEEEECCcCcccc
Confidence 999999988887773211 1 335567776 67654444 6889999998832 22222221
Q ss_pred -----cccceeEEEEecCCCEEEEEecC
Q 038568 233 -----HRSTVNALALNGDGSLLFSGGCD 255 (357)
Q Consensus 233 -----~~~~v~~~~~~~~~~~l~~~~~d 255 (357)
.....+.|+|+|+++.|++.+..
T Consensus 218 ~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 218 GPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp CSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 12356899999988877776653
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=3.3e-05 Score=64.73 Aligned_cols=228 Identities=14% Similarity=0.083 Sum_probs=129.6
Q ss_pred eEEEEe-cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecC-c-e-EEeecCCeEEEEecCCccceeee
Q 038568 33 SCLAVH-NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT-K-I-FTAHQDCKIRVWKITASRQHQLV 108 (357)
Q Consensus 33 ~~~~~s-~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~-l-~~~~~d~~i~vwd~~~~~~~~~~ 108 (357)
+|.+.. ..+|+.+....|+..++ +.......+. ....+..++|.+. + | ++-...+.|..++++.......+
T Consensus 80 ~C~~~~~~~~l~~~~~~~I~~i~~-~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 80 SCKALGPEPVLLFANRIDIRQVLP-HRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEECSSCCEEEEECBSCEEEECT-TSCCCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred eECCccccceeEeecCccceeecc-CCCcEEEEec----CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 344444 44555554448888888 6544433333 3456789999964 3 4 44456788989988765422211
Q ss_pred eecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhcccccccc
Q 038568 109 STLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDA 185 (357)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 185 (357)
. ........+++.+ .++++-...+.|.+.++........+ ...-..
T Consensus 155 ~------------------------------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~ 203 (386)
T 3v65_B 155 S------------------------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEK 203 (386)
T ss_dssp C------------------------------SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSSCSC
T ss_pred e------------------------------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCCCCC
Confidence 1 1112234566665 34445555678888887643322222 233356
Q ss_pred EEEEEEecCC-eEE-EEeCC-CeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEE-ecCCeEEE
Q 038568 186 VNAVVVSDNG-VVY-TGSAD-GRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSG-GCDRWIVV 260 (357)
Q Consensus 186 v~~~~~~~~~-~l~-~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~v 260 (357)
...++++|.+ .|+ +-... +.|..+++. ......+ ...-.....|+++|++..|+.+ ...+.|..
T Consensus 204 P~giavdp~~g~ly~td~~~~~~I~r~~~d-----------G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 204 PRAIALHPMEGTIYWTDWGNTPRIEASSMD-----------GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETT-----------SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CcEEEEEcCCCeEEEeccCCCCEEEEEeCC-----------CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 7899999855 544 43344 678888775 1111111 1223456899999866655554 45678999
Q ss_pred EecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc
Q 038568 261 WERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 261 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 310 (357)
+|+........... .......++...+ ++++-...+.|..++..+++
T Consensus 273 ~d~dG~~~~~~~~~---~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 273 ANLDGSHRKAVISQ---GLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp ECTTSCSCEEEECS---SCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EeCCCCeeEEEEEC---CCCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 99875433222221 1222344444444 66666678889999866664
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=3.2e-06 Score=65.34 Aligned_cols=188 Identities=11% Similarity=0.143 Sum_probs=123.1
Q ss_pred eecccccCCCCCCCcc--ceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEee
Q 038568 15 HCIASLKIPSPDPHHM--IISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAH 89 (357)
Q Consensus 15 ~~~~~~~~~~g~~h~~--~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~ 89 (357)
+.++++. |.. ....|.|+ +.++.+.+.+ .|+++|+ ++++.++.+ . +...--..+++..+. .+..-
T Consensus 44 ~Vv~~~p------hd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~-~Tgkv~~~~-l--~~~~FgeGit~~g~~Ly~ltw 113 (268)
T 3nok_A 44 HIIREYP------HATNAFTQGLVFHQGHFFESTGHQGTLRQLSL-ESAQPVWME-R--LGNIFAEGLASDGERLYQLTW 113 (268)
T ss_dssp EEEEEEE------CCTTCCEEEEEEETTEEEEEETTTTEEEECCS-SCSSCSEEE-E--CTTCCEEEEEECSSCEEEEES
T ss_pred EEEEEEc------CCCccccceEEEECCEEEEEcCCCCEEEEEEC-CCCcEEeEE-C--CCCcceeEEEEeCCEEEEEEc
Confidence 4556665 543 45789999 5555566666 9999999 999988887 3 122222456777777 44455
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEc
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNA 169 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~ 169 (357)
.++.+.+||..+.+....+... ..=..+++..+.|+.+..++.|.++|.
T Consensus 114 ~~~~v~V~D~~Tl~~~~ti~~~-------------------------------~eGwGLt~Dg~~L~vSdGs~~l~~iDp 162 (268)
T 3nok_A 114 TEGLLFTWSGMPPQRERTTRYS-------------------------------GEGWGLCYWNGKLVRSDGGTMLTFHEP 162 (268)
T ss_dssp SSCEEEEEETTTTEEEEEEECS-------------------------------SCCCCEEEETTEEEEECSSSEEEEECT
T ss_pred cCCEEEEEECCcCcEEEEEeCC-------------------------------CceeEEecCCCEEEEECCCCEEEEEcC
Confidence 6899999999998776665431 112455555666666667899999999
Q ss_pred Ccchhhhhcccc-cc---ccEEEEEEecCCeEEEEe-CCCeEEEEEccccccccccccceeeeeEeec------------
Q 038568 170 SNYKCLESVNKA-HE---DAVNAVVVSDNGVVYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTLVK------------ 232 (357)
Q Consensus 170 ~~~~~~~~~~~~-~~---~~v~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~------------ 232 (357)
.+.+.+.++... .. ..++.+.|. +|++.+.. .++.|.+.|.++. +.+..+..
T Consensus 163 ~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG----------~V~~~Idl~~L~~~~~~~~~ 231 (268)
T 3nok_A 163 DGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATG----------TVVGVIDASALTRAVAGQVT 231 (268)
T ss_dssp TTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTC----------BEEEEEECHHHHHHHTTTCC
T ss_pred CCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCC----------cEEEEEECCCCccccccccc
Confidence 998888777321 11 245677777 66654444 6889999998832 22222221
Q ss_pred -cccceeEEEEecCCCEEEEEec
Q 038568 233 -HRSTVNALALNGDGSLLFSGGC 254 (357)
Q Consensus 233 -~~~~v~~~~~~~~~~~l~~~~~ 254 (357)
...-.+.|+++|+++.|++.+.
T Consensus 232 ~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 232 NPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CTTCCEEEEEECTTTCCEEEEET
T ss_pred CcCCceEEEEEcCCCCEEEEeCC
Confidence 1235689999997765555443
No 253
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=8.3e-07 Score=73.33 Aligned_cols=223 Identities=9% Similarity=0.096 Sum_probs=123.6
Q ss_pred CccceeEEEEe--cceEEEeeC-----C-ceEEEeccCCccccceeccc---cCCCCceEEEEEecC-c--eEEee---c
Q 038568 28 HHMIISCLAVH--NSLLYAASL-----N-EINVFDLISDYSHVDTFSND---LSSSGSVKSITFHIT-K--IFTAH---Q 90 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~t~~~-----d-~i~iw~~~~~~~~~~~~~~~---~~~~~~v~~l~~~~~-~--l~~~~---~ 90 (357)
|-..+.+++++ ++++++-.. + .|.+||+ .+++.+..+... ..+...+..+++.++ + +++.. .
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~-~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT-LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET-TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC-CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 66789999999 555554433 5 9999999 877766666431 113345789999975 3 45544 6
Q ss_pred CCeEEEEecCCccceeeeeecCccccceeeeecCCCe-EEEecccccccccccccEEEEEEec--CeEEEEecCC-eEEE
Q 038568 91 DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNY-VTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDR-SFKI 166 (357)
Q Consensus 91 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg-~i~i 166 (357)
++.|.+||+.+++....+...+...... .....++. +......... ......+..++++| +.|+.+..++ .+..
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~-~~~~~~g~~~~~~~~~g~~-~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPED-IDLVIDGVPVQIGQPDGTV-IRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCS-CCCEETTEECBEECTTSCE-ECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccc-cceeECCEEEEeccCCCce-eceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 7899999998776543332100000000 00000010 0000000000 00113467899999 5777777665 4444
Q ss_pred EEcCc--------chhhhhcc-ccccccEEEEEEecCCe-EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccc
Q 038568 167 WNASN--------YKCLESVN-KAHEDAVNAVVVSDNGV-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRST 236 (357)
Q Consensus 167 wd~~~--------~~~~~~~~-~~~~~~v~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (357)
++... .+....+. .++......++++++|. +++...++.|.+||.. .+ ....+.. ..+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~------~G--~~~~~~~-~~~~~~ 292 (343)
T 2qe8_A 222 IKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA------DR--AYKLLVT-DEKLSW 292 (343)
T ss_dssp EEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT------TT--EEEEEEE-CGGGSC
T ss_pred EEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC------CC--CEEEEEE-CCceec
Confidence 44321 11111111 12333556789999985 6666678899999983 11 1111111 112456
Q ss_pred eeEEEEecCCCEEEEEecCCeEEEEe
Q 038568 237 VNALALNGDGSLLFSGGCDRWIVVWE 262 (357)
Q Consensus 237 v~~~~~~~~~~~l~~~~~dg~i~vwd 262 (357)
+.+++|.++++++++.+..+.+.+|.
T Consensus 293 p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 293 TDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred CCeeEECCCCcEEEEeCccccccccc
Confidence 88999999988887777655554443
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.72 E-value=2.1e-05 Score=60.33 Aligned_cols=191 Identities=12% Similarity=0.090 Sum_probs=124.2
Q ss_pred ccceecccccCCCCCCCc--cceeEEEEe-cceEEEeeC--C-ceEEEeccCCccccceeccccCCCC-ceEEEEEecCc
Q 038568 12 FKHHCIASLKIPSPDPHH--MIISCLAVH-NSLLYAASL--N-EINVFDLISDYSHVDTFSNDLSSSG-SVKSITFHITK 84 (357)
Q Consensus 12 ~~~~~~~~~~~~~g~~h~--~~i~~~~~s-~~~l~t~~~--d-~i~iw~~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~ 84 (357)
...+.++++. |. .....+.|+ +.++.+.+. . .|+.+|+ ++++.++.+.. ... --..++...+.
T Consensus 7 ~~~~v~~~~p------hd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~-~tgkv~~~~~l---~~~~fgeGi~~~~~~ 76 (243)
T 3mbr_X 7 QGYRVVKRYP------HDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDL-ETGRILQRAEV---PPPYFGAGIVAWRDR 76 (243)
T ss_dssp CCEEEEEEEE------CCTTCCEEEEEEETTEEEEEECCTTSCEEEEEET-TTCCEEEEEEC---CTTCCEEEEEEETTE
T ss_pred cceEEEEEcC------CCCccccccEEEECCEEEEECCCCCCceEEEEEC-CCCCEEEEEeC---CCCcceeEEEEeCCE
Confidence 3455666664 54 456799999 555555554 3 8999999 99999888764 222 12345666666
Q ss_pred -eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCe
Q 038568 85 -IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRS 163 (357)
Q Consensus 85 -l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~ 163 (357)
....-.++.+.++|..+.+....+... + .=..++.....|+.+..++.
T Consensus 77 ly~ltw~~~~v~v~D~~tl~~~~ti~~~----------------------------~---~Gwglt~dg~~L~vSdgs~~ 125 (243)
T 3mbr_X 77 LIQLTWRNHEGFVYDLATLTPRARFRYP----------------------------G---EGWALTSDDSHLYMSDGTAV 125 (243)
T ss_dssp EEEEESSSSEEEEEETTTTEEEEEEECS----------------------------S---CCCEEEECSSCEEEECSSSE
T ss_pred EEEEEeeCCEEEEEECCcCcEEEEEeCC----------------------------C---CceEEeeCCCEEEEECCCCe
Confidence 444556899999999988766655431 1 12455555566666667899
Q ss_pred EEEEEcCcchhhhhcccc-cc---ccEEEEEEecCCeEEEE-eCCCeEEEEEccccccccccccceeeeeEee-------
Q 038568 164 FKIWNASNYKCLESVNKA-HE---DAVNAVVVSDNGVVYTG-SADGRIRVWERSVVDHNKERKSRHMLVTTLV------- 231 (357)
Q Consensus 164 i~iwd~~~~~~~~~~~~~-~~---~~v~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~------- 231 (357)
|.++|..+.+.+.++... +. ..++.+.+. +|++.+. -.+..|.+.|.++++ .+..+.
T Consensus 126 l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~----------V~~~idl~~l~~~ 194 (243)
T 3mbr_X 126 IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK----------VVAWIDLQALVPD 194 (243)
T ss_dssp EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB----------EEEEEECGGGSTT
T ss_pred EEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC----------EEEEEECCcCccc
Confidence 999999998888777322 11 345667766 6664444 467899999988322 222221
Q ss_pred ------ccccceeEEEEecCCCEEEEEec
Q 038568 232 ------KHRSTVNALALNGDGSLLFSGGC 254 (357)
Q Consensus 232 ------~~~~~v~~~~~~~~~~~l~~~~~ 254 (357)
....-.+.|+++|+++.|++.+.
T Consensus 195 ~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 195 ADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 11235689999998776666654
No 255
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.72 E-value=6.7e-05 Score=61.94 Aligned_cols=231 Identities=14% Similarity=0.078 Sum_probs=132.0
Q ss_pred cceeEEEEe-cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecC-c-eE-EeecCCeEEEEecCCccce
Q 038568 30 MIISCLAVH-NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT-K-IF-TAHQDCKIRVWKITASRQH 105 (357)
Q Consensus 30 ~~i~~~~~s-~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~-l~-~~~~d~~i~vwd~~~~~~~ 105 (357)
+..+|.+.. ..+|+.+....|+..++ +.......+. ....+..++|.+. + |+ +-...+.|..++++.....
T Consensus 34 d~~~C~~~~~~~~ll~~~~~~I~~i~~-~g~~~~~~~~----~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFANRIDIRQVLP-HRSEYTLLLN----NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TSSCEEESSSCCEEEEECBSCEEEECT-TSCCEEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCcccccccCceeEeecccceEEEeC-CCCeeEEeec----CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 345566555 44555554447888888 5544333333 3445789999964 3 44 4446788988988765432
Q ss_pred eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhccccc
Q 038568 106 QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAH 182 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 182 (357)
..+. ........+++.+ .++++-...+.|.+.++.... ...+....
T Consensus 109 ~~~~------------------------------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~ 157 (349)
T 3v64_C 109 EVVS------------------------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQS 157 (349)
T ss_dssp EEEC------------------------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTT
T ss_pred EEEe------------------------------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCC
Confidence 2211 1112335667765 344555556789999886433 22221233
Q ss_pred cccEEEEEEecC-CeE-EEEeCC-CeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEEe-cCCe
Q 038568 183 EDAVNAVVVSDN-GVV-YTGSAD-GRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSGG-CDRW 257 (357)
Q Consensus 183 ~~~v~~~~~~~~-~~l-~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~dg~ 257 (357)
-.....++++|. +.| ++-... +.|..+++.. .....+ ...-.....|+++|++..|+.+. ..+.
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG-----------~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~ 226 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG-----------SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV 226 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-----------CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC-----------CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE
Confidence 356789999985 454 444444 7888888751 111111 12234568999998666665554 5678
Q ss_pred EEEEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc
Q 038568 258 IVVWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 258 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 310 (357)
|..+|+...........- ......++...+ .+++-...+.|..++..+++
T Consensus 227 I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 227 IERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 999998754332222211 122334444444 55666667888888866654
No 256
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.72 E-value=1.9e-06 Score=74.50 Aligned_cols=223 Identities=12% Similarity=0.093 Sum_probs=126.0
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE-e-c--CeEEEEe-
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV-K-Q--GLMYSVS- 159 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~--~~l~~~~- 159 (357)
+++...++.|.+.|+.+.+....+ .++. ......+++ . | +++++++
T Consensus 105 fVnd~~~~rVavIdl~t~~~~~ii-~ip~----------------------------g~~phg~~~~~~p~~~~v~~~~~ 155 (595)
T 1fwx_A 105 FMNDKANTRVARVRCDVMKCDAIL-EIPN----------------------------AKGIHGLRPQKWPRSNYVFCNGE 155 (595)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEE-ECSS----------------------------CCSEEEEEECCSSBCSEEEEEEC
T ss_pred EEEcCCCCEEEEEECCCceEeeEE-eCCC----------------------------CCCCcceeeeecCCCcEEEEecc
Confidence 556666778999999998766655 3321 123445554 2 4 5555553
Q ss_pred -----------------cCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEEeCC---------------CeE
Q 038568 160 -----------------WDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTGSAD---------------GRI 206 (357)
Q Consensus 160 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d---------------~~i 206 (357)
.++.+.+.|..+.+.+.++..+ . ....++++|+| ++++.+.+ ..|
T Consensus 156 ~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg-g-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v 233 (595)
T 1fwx_A 156 DETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS-G-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHI 233 (595)
T ss_dssp SCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES-S-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEE
T ss_pred cccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC-C-CccceEECCCCCEEEEEecCcccCcchhhccccccceE
Confidence 3457888999888877777221 2 34567788888 44444433 234
Q ss_pred EEEEccccccc-ccc--------------ccceee-eeEeeccccceeEEEEecCCCEEEEEe-cCCeEEEEecccCCce
Q 038568 207 RVWERSVVDHN-KER--------------KSRHML-VTTLVKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERDHRM 269 (357)
Q Consensus 207 ~i~d~~~~~~~-~~~--------------~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~ 269 (357)
.++|....... +.+ ...... +..+. -.....++.++|||+++++++ .+.+|.++|+.+.+..
T Consensus 234 ~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~ 312 (595)
T 1fwx_A 234 VVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAV 312 (595)
T ss_dssp EEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHH
T ss_pred EEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccc
Confidence 55554321100 000 000111 11221 122456799999999877766 5889999999865310
Q ss_pred ---------eeeeeccCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC-------cceeeeeeecCCcCce-----E
Q 038568 270 ---------VFAEALWGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE-------NCYRCMAFLEGHEKPV-----K 326 (357)
Q Consensus 270 ---------~~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~-------~~~~~~~~~~~h~~~v-----~ 326 (357)
........ ......++|+++ ...+...|+.|.+||+.+. +..+.+..+..|-.+- .
T Consensus 313 ~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~ 391 (595)
T 1fwx_A 313 FYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVM 391 (595)
T ss_dssp HHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETT
T ss_pred cccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceecc
Confidence 01112211 223456677665 5566778999999999762 1134566666664432 1
Q ss_pred EEEEeeCCCCCCCCeEEEEEc
Q 038568 327 SLVAISSSSSASNGIVSIGSG 347 (357)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~s~ 347 (357)
++..+||++ +|+++
T Consensus 392 g~t~~~DGk-------~l~~~ 405 (595)
T 1fwx_A 392 GETLDATND-------WLVCL 405 (595)
T ss_dssp TTSTTCCSS-------EEEEE
T ss_pred ceEeCCCCC-------EEEEc
Confidence 223467776 66655
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.71 E-value=1.3e-05 Score=65.57 Aligned_cols=237 Identities=11% Similarity=0.101 Sum_probs=130.6
Q ss_pred eeEEEEe--cceEEEeeCC-ceEEEeccCCccccceecccc-----------------CCCCceEEEEEec-Cc-eEEee
Q 038568 32 ISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDL-----------------SSSGSVKSITFHI-TK-IFTAH 89 (357)
Q Consensus 32 i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~-----------------~~~~~v~~l~~~~-~~-l~~~~ 89 (357)
..+++++ +++++++..+ .|..|+. .+++ +..+.... .....+..+++.+ ++ |+.+.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEG-PNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECC-TTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECC-CCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 4567787 6778888888 9999988 5533 22222100 0123578999997 55 77776
Q ss_pred cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe--------
Q 038568 90 QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-------- 159 (357)
Q Consensus 90 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------- 159 (357)
..+.|..+|..++........... ........+++.+ ..+..+.
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~--------------------------~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~ 152 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDG--------------------------VPFKWLYAVTVDQRTGIVYFTDVSTLYDDR 152 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETT--------------------------EECSCEEEEEECTTTCCEEEEESCSSCCTT
T ss_pred CCCCEEEEeCCCCEEEEecccCCC--------------------------CcccccceEEEecCCCEEEEECCccccccc
Confidence 666688888765432111111000 0112345566654 2333332
Q ss_pred ----------cCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-eEEEE-eCCCeEEEEEccccccccccccceeee
Q 038568 160 ----------WDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-VVYTG-SADGRIRVWERSVVDHNKERKSRHMLV 227 (357)
Q Consensus 160 ----------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~ 227 (357)
.++.|..+|..+++..... ........++++|++ .|+++ ...+.|..|++.... .......
T Consensus 153 ~~~~~~~~~~~~g~v~~~d~~~~~~~~~~--~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~-----~~~~~~~ 225 (322)
T 2fp8_A 153 GVQQIMDTSDKTGRLIKYDPSTKETTLLL--KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK-----KGTAEVL 225 (322)
T ss_dssp CHHHHHHHTCCCEEEEEEETTTTEEEEEE--EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT-----TTCEEEE
T ss_pred ccceehcccCCCceEEEEeCCCCEEEEec--cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc-----CCccceE
Confidence 2367888887655432211 122345678999998 35444 566899999986211 0011111
Q ss_pred eEeeccccceeEEEEecCCCEEEEEec----------CCeEEEEecccCCceeeeeeccCC-ccceEEEeecCc-eEEEe
Q 038568 228 TTLVKHRSTVNALALNGDGSLLFSGGC----------DRWIVVWERERDHRMVFAEALWGH-TGALLCLINVGD-LLASG 295 (357)
Q Consensus 228 ~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~-~l~~~ 295 (357)
.. ..+ ...++++++|++.++... .+.|..+|.. ++....+....+. -..+..+.+... ++++.
T Consensus 226 ~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 226 VK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp EE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred Ee---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 11 123 678999999986666544 4678888875 4433333222211 123444444444 55555
Q ss_pred cCCCeEEEeeCCC
Q 038568 296 SADRTVRIWQRGK 308 (357)
Q Consensus 296 ~~dg~i~vw~~~~ 308 (357)
..++.|..+++..
T Consensus 301 ~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 301 LFHGSVGILVYDK 313 (322)
T ss_dssp SSCSEEEEEEC--
T ss_pred cCCCceEEEeccc
Confidence 5678898888764
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.71 E-value=1.6e-05 Score=64.88 Aligned_cols=244 Identities=14% Similarity=0.101 Sum_probs=130.7
Q ss_pred ceEEEEEecCc--eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe
Q 038568 74 SVKSITFHITK--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151 (357)
Q Consensus 74 ~v~~l~~~~~~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 151 (357)
...+++|.+++ ++++..++.|..|+..+++.. .+.......... ...+ ...............+++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~----~~~g------~~~~~~~~~~~~p~gi~~~ 88 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKA----FCEN------STDAEKRPLCGRTYDISYN 88 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHH----HHTT------CCCGGGHHHHCCEEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEeccccccccc----cccc------ccchhccccCCCCceEEEc
Confidence 44568888765 778888899999988765422 111100000000 0000 0000000112346788888
Q ss_pred c--CeEEEEecCCeEEEEEcCcchhhhhccc----cccccEEEEEEec-CCeEEEEeC------------------CCeE
Q 038568 152 Q--GLMYSVSWDRSFKIWNASNYKCLESVNK----AHEDAVNAVVVSD-NGVVYTGSA------------------DGRI 206 (357)
Q Consensus 152 ~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~~~~~~-~~~l~~~~~------------------d~~i 206 (357)
+ ..|+.+...+.|..+|..+++. ..+.. ........+++.+ +|.+..+.. ++.|
T Consensus 89 ~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 89 LQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp TTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred CCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceE
Confidence 5 6677776666788888775532 12201 1123467899999 886555432 3667
Q ss_pred EEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEE-ecCCeEEEEecccCC--ceeeeeeccCCccceE
Q 038568 207 RVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERERDH--RMVFAEALWGHTGALL 283 (357)
Q Consensus 207 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~ 283 (357)
..||.. . ... ..+.........++++|+++.|+.+ ..++.|.+|++.... ....+..+. + ..
T Consensus 168 ~~~d~~------~----~~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---g-P~ 232 (322)
T 2fp8_A 168 IKYDPS------T----KET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---N-PG 232 (322)
T ss_dssp EEEETT------T----TEE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---S-EE
T ss_pred EEEeCC------C----CEE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---C-CC
Confidence 788764 1 111 1111112345679999999866655 556899999987532 111222222 2 44
Q ss_pred EEeecCc--eEEEecC----------CCeEEEeeCCCCcceeeeeeecCC----cCceEEEEEeeCCCCCCCCeEEEEEc
Q 038568 284 CLINVGD--LLASGSA----------DRTVRIWQRGKENCYRCMAFLEGH----EKPVKSLVAISSSSSASNGIVSIGSG 347 (357)
Q Consensus 284 ~~~~~~~--~l~~~~~----------dg~i~vw~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~~~~~l~s~ 347 (357)
.++.+++ +.++... .+.|..+|.. + +.+..+... ...++++++ .++. ++++.
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G---~~~~~~~~~~g~~~~~~~~~~~-~~g~-------L~v~~ 300 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-G---NILEVIPLPPPFAGEHFEQIQE-HDGL-------LYIGT 300 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-S---CEEEEEECCTTTTTSCCCEEEE-ETTE-------EEEEC
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCC-C---CEEEEEECCCCCccccceEEEE-eCCE-------EEEee
Confidence 4555554 4333332 4668888764 4 223333222 234667766 4554 66666
Q ss_pred CCCCeEEec
Q 038568 348 SLNGEIKVW 356 (357)
Q Consensus 348 ~~dg~v~~w 356 (357)
...+.|..+
T Consensus 301 ~~~~~i~~~ 309 (322)
T 2fp8_A 301 LFHGSVGIL 309 (322)
T ss_dssp SSCSEEEEE
T ss_pred cCCCceEEE
Confidence 667777665
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.69 E-value=3.6e-05 Score=68.09 Aligned_cols=287 Identities=9% Similarity=-0.010 Sum_probs=147.7
Q ss_pred EEecceEEEeeCC-ceEEEeccCCccccceeccccCC-CCceE-EEEEecC------ceEEee------cCCeEEEEecC
Q 038568 36 AVHNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSS-SGSVK-SITFHIT------KIFTAH------QDCKIRVWKIT 100 (357)
Q Consensus 36 ~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~-~~~v~-~l~~~~~------~l~~~~------~d~~i~vwd~~ 100 (357)
++.+..++.++.| .|..+|. .+++.+-........ ...+. .-....+ .+++++ .++.|.-+|..
T Consensus 114 a~~~~~v~~~t~dg~l~AlD~-~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~ 192 (582)
T 1flg_A 114 AIYGDKVFFGTLDASVVALNK-NTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPD 192 (582)
T ss_dssp EEETTEEEEEETTTEEEEEES-SSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTT
T ss_pred EEECCEEEEEeCCCEEEEEEC-CCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECC
Confidence 4456778888888 9999999 888887665531100 00111 1112234 455554 37899999999
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEe--ccccccccc---------------ccccEEEEEEec--CeEEEEec-
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVR--RHKKRLWLE---------------HWDAVSDLVVKQ--GLMYSVSW- 160 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------------~~~~v~~~~~~~--~~l~~~~~- 160 (357)
+++..-....... ..... .+..... ......|.. ....-...++.+ ++++.+..
T Consensus 193 tG~~~W~~~~~~~----~~~p~--~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn 266 (582)
T 1flg_A 193 TGEEIWMRPFVEG----HMGRL--NGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGN 266 (582)
T ss_dssp TCCEEEEEESSTT----CEEEE--TTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECC
T ss_pred CCCEEeecCCCcc----ccccc--cCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCC
Confidence 9886553322100 00000 0000000 000001100 000112345555 56665552
Q ss_pred -------------------C----CeEEEEEcCcchhhhhcccccc---------ccEEEEEEe-cCC----eEEEEeCC
Q 038568 161 -------------------D----RSFKIWNASNYKCLESVNKAHE---------DAVNAVVVS-DNG----VVYTGSAD 203 (357)
Q Consensus 161 -------------------d----g~i~iwd~~~~~~~~~~~~~~~---------~~v~~~~~~-~~~----~l~~~~~d 203 (357)
| +.|..+|.++++.+..++..+. .++. +... .+| .++.++.+
T Consensus 267 ~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~ 345 (582)
T 1flg_A 267 PGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRN 345 (582)
T ss_dssp BSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTT
T ss_pred CCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCC
Confidence 2 6899999999998887743221 1221 1221 355 47788999
Q ss_pred CeEEEEEccccccccccccc-------------eeeee--------------------Eeecccc--ceeEEEEecCCCE
Q 038568 204 GRIRVWERSVVDHNKERKSR-------------HMLVT--------------------TLVKHRS--TVNALALNGDGSL 248 (357)
Q Consensus 204 ~~i~i~d~~~~~~~~~~~~~-------------~~~~~--------------------~~~~~~~--~v~~~~~~~~~~~ 248 (357)
|.++++|.++.+........ .+++. ......+ .-..++++|+..+
T Consensus 346 G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~ 425 (582)
T 1flg_A 346 GFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGL 425 (582)
T ss_dssp SEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCC
T ss_pred ceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCE
Confidence 99999998744322110000 00000 0000000 0124567776555
Q ss_pred EEEEe---------------------------------cCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEe
Q 038568 249 LFSGG---------------------------------CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASG 295 (357)
Q Consensus 249 l~~~~---------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~ 295 (357)
+++.. .+|.|..||+.+++............. ..+...+.+++.+
T Consensus 426 ~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~--g~~~tagglvf~g 503 (582)
T 1flg_A 426 FYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWA--GVLATAGNLVFTG 503 (582)
T ss_dssp EEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCS--CCEEETTTEEEEE
T ss_pred EEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcc--cceEeCCCEEEEE
Confidence 54432 268899999999886543332111111 1233456688889
Q ss_pred cCCCeEEEeeCCCCcceeeeeeecCCcCce-EEEEEeeCCC
Q 038568 296 SADRTVRIWQRGKENCYRCMAFLEGHEKPV-KSLVAISSSS 335 (357)
Q Consensus 296 ~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~ 335 (357)
+.||.++.||.++++ .+-.++.....+ .-+.+..+++
T Consensus 504 ~~dg~l~A~D~~tG~---~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 504 TGDGYFKAFDAKSGK---ELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTE
T ss_pred CCCCcEEEEECCCCC---EEEEecCCCCcccCceEEEECCE
Confidence 999999999999984 444444322211 2255666765
No 260
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.68 E-value=2.8e-06 Score=73.51 Aligned_cols=250 Identities=9% Similarity=0.063 Sum_probs=145.0
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeE-----------EEecccccccccccccEEEEEEec-
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYV-----------TVRRHKKRLWLEHWDAVSDLVVKQ- 152 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~- 152 (357)
|.+|+..|.++|+-+.+.+.+..+..+......--........+ .+.......+.--...-..+.+..
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 88999999999999999998888877653321100000000000 000111101111111114555522
Q ss_pred ----CeEE-EEecCCeEEEEEcCcchhhhhccccccccEEEEEE-e-cCC-eEEEEe------------------CCCeE
Q 038568 153 ----GLMY-SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVV-S-DNG-VVYTGS------------------ADGRI 206 (357)
Q Consensus 153 ----~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~-~l~~~~------------------~d~~i 206 (357)
++++ +...++.|.+.|+.+.++...+..........+++ . |++ ++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 4444 44456789999999998777442244456778887 4 777 566663 34578
Q ss_pred EEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCC------------------------------
Q 038568 207 RVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR------------------------------ 256 (357)
Q Consensus 207 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------------------------------ 256 (357)
.++|.. ..+...++.-.. ....++++|+|+++++.+.+.
T Consensus 178 tvID~~----------t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 178 TAVDAD----------KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp EEEETT----------TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred EEEECC----------CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 888877 333444443222 346788999999998888653
Q ss_pred --------eEEEEeccc--CCc-eeeeeeccCCccceEEEeecC--c-eEEEecCCCeEEEeeCCCCcc---------ee
Q 038568 257 --------WIVVWERER--DHR-MVFAEALWGHTGALLCLINVG--D-LLASGSADRTVRIWQRGKENC---------YR 313 (357)
Q Consensus 257 --------~i~vwd~~~--~~~-~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~vw~~~~~~~---------~~ 313 (357)
.|.|.|..+ +.. ...+.. + ....++.++| + .++++..+.+|.++|+.+.+. ..
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv--g--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~ 322 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPI--A--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA 322 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEE--E--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEec--C--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccc
Confidence 244445444 211 111111 1 1122344444 4 566666789999999996421 01
Q ss_pred eeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 314 CMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 314 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
....... ......++|+|++. ..++.-.|++|.+||
T Consensus 323 v~~~v~v-G~gP~h~aF~~dG~-------aY~t~~ldsqV~kwd 358 (595)
T 1fwx_A 323 VVAEPEL-GLGPLHTAFDGRGN-------AYTSLFLDSQVVKWN 358 (595)
T ss_dssp EEECCBC-CSCEEEEEECTTSE-------EEEEETTTTEEEEEE
T ss_pred eEEEcCC-CCCcceEEECCCCe-------EEEEEecCCcEEEEE
Confidence 2333332 34578899999986 778888999999996
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.67 E-value=1.4e-05 Score=70.68 Aligned_cols=196 Identities=11% Similarity=0.034 Sum_probs=107.4
Q ss_pred cceEEEeeC-C-ceEEEeccCCccccceeccccCCC--------CceEEEEEecCceEEeecCCeEEEEecCCccceeee
Q 038568 39 NSLLYAASL-N-EINVFDLISDYSHVDTFSNDLSSS--------GSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLV 108 (357)
Q Consensus 39 ~~~l~t~~~-d-~i~iw~~~~~~~~~~~~~~~~~~~--------~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 108 (357)
+..+++++. + .|.-+|...+++.+-.+....... ..-..++...+.++.++.|+.+..+|..+++..-..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~ 141 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEV 141 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCCEEEEEECCCCCEEEEe
Confidence 566666666 6 888888622556655544210000 001123445556888889999999999998865444
Q ss_pred eecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEec------CCeEEEEEcCcchhhhhccccc
Q 038568 109 STLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSW------DRSFKIWNASNYKCLESVNKAH 182 (357)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~ 182 (357)
........ +.....++ .....++.++. ++.|..+|.++++.+.++....
T Consensus 142 ~~~~~~~~---------------------~~~~~~P~----v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~ 196 (571)
T 2ad6_A 142 EVCDPKVG---------------------STLTQAPF----VAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATG 196 (571)
T ss_dssp ECCCGGGT---------------------CBCCSCCE----EETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred cCCCCCcc---------------------ceeccCCE----EECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCC
Confidence 32110000 00001111 12355555554 7899999999988776552111
Q ss_pred cc-------------------------------------cEEEEEEecC-CeEEEEeCC----------------CeEEE
Q 038568 183 ED-------------------------------------AVNAVVVSDN-GVVYTGSAD----------------GRIRV 208 (357)
Q Consensus 183 ~~-------------------------------------~v~~~~~~~~-~~l~~~~~d----------------~~i~i 208 (357)
.. ....+++.++ +.++.+..+ +.|..
T Consensus 197 ~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~A 276 (571)
T 2ad6_A 197 SDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWG 276 (571)
T ss_dssp CHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEE
T ss_pred CccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEE
Confidence 00 0013455654 355555432 35888
Q ss_pred EEccccccccccccceeeeeEee--cc--------ccceeEEEEecCCC---EEEEEecCCeEEEEecccCCcee
Q 038568 209 WERSVVDHNKERKSRHMLVTTLV--KH--------RSTVNALALNGDGS---LLFSGGCDRWIVVWERERDHRMV 270 (357)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~--~~--------~~~v~~~~~~~~~~---~l~~~~~dg~i~vwd~~~~~~~~ 270 (357)
+|.++ .+.+-.++ .| ..++. +....+|+ .++.++.+|.++++|..+++.+.
T Consensus 277 ld~~t----------G~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 277 RDLDT----------GMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp EETTT----------CCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred EecCC----------CcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 88872 22222222 11 12221 22234674 67788899999999999887543
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.66 E-value=4.2e-05 Score=67.65 Aligned_cols=265 Identities=11% Similarity=0.006 Sum_probs=134.7
Q ss_pred EEEeeCC-ceEEEeccCCccccceeccccC-CCCceEE-EEEecCceEEee------cCCeEEEEecCCccceeeeeecC
Q 038568 42 LYAASLN-EINVFDLISDYSHVDTFSNDLS-SSGSVKS-ITFHITKIFTAH------QDCKIRVWKITASRQHQLVSTLP 112 (357)
Q Consensus 42 l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~-l~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~ 112 (357)
|+.++.| .|..+|. .+++.+-....... ....+.+ -....+.++.++ .++.|.-+|..+++..-......
T Consensus 124 V~v~t~dg~l~AlDa-~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNA-ETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEET-TTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEEC-CCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 7788888 9999999 88888766543110 0001111 112234466655 37999999999998765554432
Q ss_pred ccccceeeee-cCCC------eEEEecccccccccccccE-EEEEEec--CeEEEEecC----------------CeEEE
Q 038568 113 TVKDRLIRSV-LPNN------YVTVRRHKKRLWLEHWDAV-SDLVVKQ--GLMYSVSWD----------------RSFKI 166 (357)
Q Consensus 113 ~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~v-~~~~~~~--~~l~~~~~d----------------g~i~i 166 (357)
.......... ..++ ...........+..-...+ ...++.+ ++++.+..+ +.|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 2100000000 0000 0000000000010001111 1234444 566666554 37999
Q ss_pred EEcCcchhhhhcccccc---------ccEEEEEEe-cCC---e-EEEEeCCCeEEEEEcccccccccccc----------
Q 038568 167 WNASNYKCLESVNKAHE---------DAVNAVVVS-DNG---V-VYTGSADGRIRVWERSVVDHNKERKS---------- 222 (357)
Q Consensus 167 wd~~~~~~~~~~~~~~~---------~~v~~~~~~-~~~---~-l~~~~~d~~i~i~d~~~~~~~~~~~~---------- 222 (357)
+|.++++.+..++..+. .++. +... .+| . ++.++.+|.+.++|.++.+.......
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~ 361 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSV 361 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEE
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccccc
Confidence 99999998877643322 1221 2222 455 3 66688999999999874432211000
Q ss_pred ---ceeeee--------------Eeecc--ccceeEEEEecCCCEEEEEe------------------------------
Q 038568 223 ---RHMLVT--------------TLVKH--RSTVNALALNGDGSLLFSGG------------------------------ 253 (357)
Q Consensus 223 ---~~~~~~--------------~~~~~--~~~v~~~~~~~~~~~l~~~~------------------------------ 253 (357)
...++. .+.+. ...-..++++|+..++++..
T Consensus 362 ~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 441 (599)
T 1w6s_A 362 DLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPG 441 (599)
T ss_dssp CTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEEC
T ss_pred ccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccC
Confidence 000000 00000 00012456777666554431
Q ss_pred ---------cCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCc
Q 038568 254 ---------CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 254 ---------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 310 (357)
.+|.|..||+.+++..-....- ....--.+.-.+.+++.++.||.++.||.++++
T Consensus 442 p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 442 PKGDRQNYEGLGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp TTSBTTTTBCCEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCCcccCCCcCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 3478999999988754433221 111111234456778889999999999999984
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.61 E-value=0.00013 Score=59.28 Aligned_cols=223 Identities=12% Similarity=0.073 Sum_probs=127.4
Q ss_pred eEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc--e-EEeecCCeEEEEecCCc---cceeeeeecCcc
Q 038568 41 LLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--I-FTAHQDCKIRVWKITAS---RQHQLVSTLPTV 114 (357)
Q Consensus 41 ~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l-~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~ 114 (357)
+|+.+..+.|+..|+ ++.+....+. ....+..++|.+.. | ++-...+.|..+++... .....+..
T Consensus 3 ~ll~~~~~~I~~i~~-~~~~~~~~~~----~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~---- 73 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTL-DRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---- 73 (316)
T ss_dssp EEEEECBSSEEEEET-TSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----
T ss_pred EEEEECCCeEEEEEC-CCcceEehhc----CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----
Confidence 455555558888898 6655544443 44567899999743 4 44455688999988752 11111100
Q ss_pred ccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeE-EEEecCCeEEEEEcCcchhhhhccccccccEEEEEE
Q 038568 115 KDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLM-YSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVV 191 (357)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 191 (357)
........+++.+ +.| ++-...+.|.+.++.... ...+..........+++
T Consensus 74 -------------------------~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iav 127 (316)
T 1ijq_A 74 -------------------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVV 127 (316)
T ss_dssp -------------------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEE
T ss_pred -------------------------CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEe
Confidence 1112345677764 444 454567889999986432 22221223356789999
Q ss_pred ecC-CeEEEEeC-C-CeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEEe-cCCeEEEEecccC
Q 038568 192 SDN-GVVYTGSA-D-GRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERD 266 (357)
Q Consensus 192 ~~~-~~l~~~~~-d-~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~ 266 (357)
+|. +.|+.+.. . +.|..+++. ......+ ...-.....+++++++..|+.+. ..+.|..+|+...
T Consensus 128 dp~~g~ly~~d~~~~~~I~~~~~d-----------G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 128 DPVHGFMYWTDWGTPAKIKKGGLN-----------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETT-----------SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCEEEEEccCCCCeEEEEcCC-----------CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 985 45544443 3 688888775 1111111 12234578999999776665554 5678999999753
Q ss_pred CceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc
Q 038568 267 HRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 267 ~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 310 (357)
... .+............++..++ ++++-...+.|..++..+++
T Consensus 197 ~~~-~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 197 NRK-TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp SCE-EEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred ceE-EEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 322 22221111122344454455 55666677889999887664
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.56 E-value=4.1e-05 Score=67.74 Aligned_cols=71 Identities=10% Similarity=0.123 Sum_probs=47.0
Q ss_pred ecceEEEeeCC-ceEEEeccCCccccceeccccCCCCc------eEEEEEecCceEEeecCCeEEEEecCCccceeeee
Q 038568 38 HNSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGS------VKSITFHITKIFTAHQDCKIRVWKITASRQHQLVS 109 (357)
Q Consensus 38 s~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~------v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 109 (357)
.+..+++++.+ .|.-+|. .+++.+-.+......... -..+++..+.++.++.|+.|.-+|..+++..-...
T Consensus 67 ~~g~vyv~~~~~~v~AlD~-~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDA-KTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEES-SSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEEC-CCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 36666667765 8888999 888887776541111000 02234455568888899999999999998654443
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.54 E-value=3.9e-05 Score=69.26 Aligned_cols=260 Identities=11% Similarity=0.055 Sum_probs=129.7
Q ss_pred cceEEEeeCC------------ceEEEeccCCccc--cceeccccCCCCceEEEEEecCc--eEEee-cCCeEEEEecCC
Q 038568 39 NSLLYAASLN------------EINVFDLISDYSH--VDTFSNDLSSSGSVKSITFHITK--IFTAH-QDCKIRVWKITA 101 (357)
Q Consensus 39 ~~~l~t~~~d------------~i~iw~~~~~~~~--~~~~~~~~~~~~~v~~l~~~~~~--l~~~~-~d~~i~vwd~~~ 101 (357)
+++++.|+.+ .+.+||. .+.+- +..+.. ++.....++++..++ ++.|+ .+..+.+||..+
T Consensus 198 g~l~v~GG~~~~~~~~~~~~~~~~~~yd~-~t~~w~~~~~~~~--~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t 274 (656)
T 1k3i_A 198 GRVLMWSSYRNDAFGGSPGGITLTSSWDP-STGIVSDRTVTVT--KHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS 274 (656)
T ss_dssp TEEEEEEECCCTTTCSCCCSEEEEEEECT-TTCCBCCCEEEEC--SCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred CEEEEEecccccccccCCCCeEEEEEEeC-CCCcEEeCcccCC--CCCCccccccCCCCCCEEEeCCCCCCceEEecCcC
Confidence 6777777632 4788998 65432 222221 133334456776655 66666 355799999887
Q ss_pred ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe-c-CeEEEEe-cC-----CeEEEEEcCcch
Q 038568 102 SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK-Q-GLMYSVS-WD-----RSFKIWNASNYK 173 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~l~~~~-~d-----g~i~iwd~~~~~ 173 (357)
.+.... ..++ ..... .+++.. . ++++.|+ .+ ..+.+||..+.+
T Consensus 275 ~~W~~~-~~~~---------------------------~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 275 DSWIPG-PDMQ---------------------------VARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp TEEEEC-CCCS---------------------------SCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred CceeEC-CCCC---------------------------ccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 653322 1111 11111 223333 3 6677777 33 568999987654
Q ss_pred hhh-------hccccccccEEEEEEecCC-eEEEEeCC---------CeEEEEEccccccccccccceeeeeEeec----
Q 038568 174 CLE-------SVNKAHEDAVNAVVVSDNG-VVYTGSAD---------GRIRVWERSVVDHNKERKSRHMLVTTLVK---- 232 (357)
Q Consensus 174 ~~~-------~~~~~~~~~v~~~~~~~~~-~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~---- 232 (357)
-.. .+...... ..+..++ .++.|+.+ ..+..||... .. ..........
T Consensus 326 W~~~~~~~~~p~~~~~~~----~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~------~~-w~~~~~~~~~~~~~ 394 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTADKQ----GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG------SG-DVKSAGKRQSNRGV 394 (656)
T ss_dssp EEEETTSCSGGGCCCCTT----GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST------TC-EEEEEEECEETTEE
T ss_pred ceeCCCcccccccccccc----ceeecCCceEEEECCCCcEEEecCccceeeeecCC------cc-eeecCCcccccccc
Confidence 211 11000000 1111233 23444433 4567788762 11 0111111110
Q ss_pred --cccceeEEEEec-CCCEEEEEecCC-----------eEEEEecccCCceeee-eeccCCccceEEEee-cCceEEEec
Q 038568 233 --HRSTVNALALNG-DGSLLFSGGCDR-----------WIVVWERERDHRMVFA-EALWGHTGALLCLIN-VGDLLASGS 296 (357)
Q Consensus 233 --~~~~v~~~~~~~-~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~-~~~~l~~~~ 296 (357)
....-.++.|.. ++++++.|+.++ .|.+||..+..-.... ..+........++.. ++.+++.|+
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECC
Confidence 011223444544 677888887543 6888888765422111 011111112232333 666888887
Q ss_pred CC-----------CeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCC
Q 038568 297 AD-----------RTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSL 349 (357)
Q Consensus 297 ~d-----------g~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~ 349 (357)
.+ ..+.+||..+.+ +..+..+...........+.|+++ +++.||.
T Consensus 475 ~~~~~~~~~~~~~~~v~~ydp~t~~-W~~~~~~~~~R~~hs~a~ll~dg~-------v~v~GG~ 530 (656)
T 1k3i_A 475 QRRGIPFEDSTPVFTPEIYVPEQDT-FYKQNPNSIVRVYHSISLLLPDGR-------VFNGGGG 530 (656)
T ss_dssp BSBCCTTCCCSBCCCCEEEEGGGTE-EEECCCCSSCCCTTEEEEECTTSC-------EEEEECC
T ss_pred cccCcCcCCCCcccceEEEcCCCCc-eeecCCCCCccccccHhhcCCCcE-------EEecCCC
Confidence 54 468999998752 443333332222233445668888 8888884
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.54 E-value=0.00027 Score=59.44 Aligned_cols=225 Identities=12% Similarity=0.075 Sum_probs=130.8
Q ss_pred cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEe-ecCCeEEEEecCCccc---eeeeeecC
Q 038568 39 NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTA-HQDCKIRVWKITASRQ---HQLVSTLP 112 (357)
Q Consensus 39 ~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~-~~d~~i~vwd~~~~~~---~~~~~~~~ 112 (357)
..+|+.+....|+..++ +.......+. ....+..|+|.+.. |+.+ ...+.|..+++..... ...+.
T Consensus 83 ~~~ll~~~~~~I~~i~l-~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~--- 154 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTL-DRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI--- 154 (400)
T ss_dssp SCEEEEEETTEEEEECT-TSCSCEEEEC----SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE---
T ss_pred cceeEEeccceeEEEcc-CCcceeEecc----ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE---
Confidence 34566555558888888 6544443333 55678899999743 4444 4567888888865321 11110
Q ss_pred ccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEE
Q 038568 113 TVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAV 189 (357)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 189 (357)
.........+++.+ ++.++-...+.|.+.++........+ .........|
T Consensus 155 --------------------------~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~-~~~~~~P~~i 207 (400)
T 3p5b_L 155 --------------------------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAI 207 (400)
T ss_dssp --------------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE-ECSSCCEEEE
T ss_pred --------------------------eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE-eCCCCCcceE
Confidence 01223456777775 44445556788999988654332222 3334457899
Q ss_pred EEecC-CeEEEEe--CCCeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEEe-cCCeEEEEecc
Q 038568 190 VVSDN-GVVYTGS--ADGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERE 264 (357)
Q Consensus 190 ~~~~~-~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~ 264 (357)
+++|. +.|+... ..+.|...++. ......+ ...-.....|++++++..|+.+. ..+.|..+|++
T Consensus 208 avdp~~g~ly~td~~~~~~I~~~~~d-----------G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 208 VVDPVHGFMYWTDWGTPAKIKKGGLN-----------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp EEETTTTEEEEEECSSSCCEEEEETT-----------SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEecccCeEEEEeCCCCCEEEEEeCC-----------CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 99985 4554443 24678888875 1111111 22235678999998777666654 46789999987
Q ss_pred cCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc
Q 038568 265 RDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 265 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 310 (357)
......... ....-.....++...+ ++.+-...+.|..++..+++
T Consensus 277 G~~~~~~~~-~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 277 GGNRKTILE-DEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 322 (400)
T ss_dssp SCCCEEEEE-CSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCC
T ss_pred CCccEEEEe-CCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCC
Confidence 544322222 1111222345555555 56666677889999877664
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.52 E-value=6e-05 Score=66.67 Aligned_cols=197 Identities=9% Similarity=-0.008 Sum_probs=108.7
Q ss_pred cceEEEeeC-C-ceEEEeccCCccccceeccccCCC--------CceEEEEE--ecCc----eEEeecCCeEEEEecCCc
Q 038568 39 NSLLYAASL-N-EINVFDLISDYSHVDTFSNDLSSS--------GSVKSITF--HITK----IFTAHQDCKIRVWKITAS 102 (357)
Q Consensus 39 ~~~l~t~~~-d-~i~iw~~~~~~~~~~~~~~~~~~~--------~~v~~l~~--~~~~----l~~~~~d~~i~vwd~~~~ 102 (357)
+..+++++. + .|.-+|...+++.+-.+....... .....+++ ..+. ++.++.|+.|.-+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 666777776 6 888888722566655554211000 00123455 3444 888889999999999999
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEe------cCCeEEEEEcCcchhhh
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVS------WDRSFKIWNASNYKCLE 176 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~ 176 (357)
+..-......... . +.....++ .....++.++ .+|.|+.+|.++++.+.
T Consensus 142 ~~~W~~~~~~~~~-~--------------------~~~~ssP~----v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 142 ETVWKVENSDIKV-G--------------------STLTIAPY----VVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp CEEEEEECCCGGG-T--------------------CBCCSCCE----EETTEEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CEEEeecCCCCCc-c--------------------ceeecCCE----EECCEEEEEecccccCCCCeEEEEECCCCcEEE
Confidence 8654433211000 0 00001111 1234555555 37899999999988776
Q ss_pred hccccccc-------------------------------------cEEEEEEecCC-eEEEEeCC---------------
Q 038568 177 SVNKAHED-------------------------------------AVNAVVVSDNG-VVYTGSAD--------------- 203 (357)
Q Consensus 177 ~~~~~~~~-------------------------------------~v~~~~~~~~~-~l~~~~~d--------------- 203 (357)
.+...... .-..+++.++. .++.+..+
T Consensus 197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y 276 (599)
T 1w6s_A 197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW 276 (599)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccc
Confidence 55211100 00134455544 66666554
Q ss_pred -CeEEEEEccccccccccccceeeeeEee--ccc--------cceeEEEEe-cCC---CEEEEEecCCeEEEEecccCCc
Q 038568 204 -GRIRVWERSVVDHNKERKSRHMLVTTLV--KHR--------STVNALALN-GDG---SLLFSGGCDRWIVVWERERDHR 268 (357)
Q Consensus 204 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~--------~~v~~~~~~-~~~---~~l~~~~~dg~i~vwd~~~~~~ 268 (357)
+.|..+|.++ .+.+-.++ .|. .++. +... .+| ..++.++.+|.++++|.++++.
T Consensus 277 ~~sv~Ald~~T----------G~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 277 TMTIFGRDADT----------GEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp SSEEEEEETTT----------CCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEeCCC----------CceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 3788888872 22222222 221 1121 2222 467 4677788999999999998876
Q ss_pred eee
Q 038568 269 MVF 271 (357)
Q Consensus 269 ~~~ 271 (357)
+..
T Consensus 346 lw~ 348 (599)
T 1w6s_A 346 VSA 348 (599)
T ss_dssp EEE
T ss_pred eec
Confidence 543
No 268
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.50 E-value=0.00022 Score=56.36 Aligned_cols=193 Identities=13% Similarity=0.141 Sum_probs=114.0
Q ss_pred cceeEEEEe--cceEEEee-CC-ceEEEeccCCccccceeccccCCCCceEEEEEecC-c-e-EEeecCCeEEEEecCCc
Q 038568 30 MIISCLAVH--NSLLYAAS-LN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT-K-I-FTAHQDCKIRVWKITAS 102 (357)
Q Consensus 30 ~~i~~~~~s--~~~l~t~~-~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~-l-~~~~~d~~i~vwd~~~~ 102 (357)
..+..++++ ++.|+.+. .+ .|..++. +.......+.. .......+++.++ + | ++-...+.|.+++++..
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~-~g~~~~~~~~~---~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASL-HGGEPTTIIRQ---DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEES-SSCCCEEEECT---TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEec-CCCCcEEEEEC---CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCC
Confidence 346788898 45555554 45 9999998 65443333322 2356789999985 3 4 44455678999998653
Q ss_pred cceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEec---CCeEEEEEcCcchhhhh
Q 038568 103 RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSW---DRSFKIWNASNYKCLES 177 (357)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~---dg~i~iwd~~~~~~~~~ 177 (357)
... .+.. ........+++++ ..|+.+.. .+.|..+++.. .....
T Consensus 112 ~~~-~~~~-----------------------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~ 160 (267)
T 1npe_A 112 QRR-VLFD-----------------------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRI 160 (267)
T ss_dssp SCE-EEEC-----------------------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEE
T ss_pred CEE-EEEE-----------------------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEE
Confidence 321 1110 1113457888887 55555554 36888888753 22222
Q ss_pred ccccccccEEEEEEecCC-e-EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC
Q 038568 178 VNKAHEDAVNAVVVSDNG-V-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD 255 (357)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~-~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 255 (357)
+..........+++++++ . +++-...+.|..+|+.. ......... ......++.. ++.++++...+
T Consensus 161 ~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g----------~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 161 LAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ----------PGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE----------EEEEEEEEC-CCSEEEEEEE-TTEEEEEETTT
T ss_pred EEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC----------CceEEEecC-CCCceEEEEe-CCEEEEEECCC
Confidence 211223467889999975 5 45555678999999861 111111222 2234566664 34444444456
Q ss_pred CeEEEEecccCCce
Q 038568 256 RWIVVWERERDHRM 269 (357)
Q Consensus 256 g~i~vwd~~~~~~~ 269 (357)
+.|.++|..+++..
T Consensus 229 ~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 229 NSVIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTTTEEE
T ss_pred CeEEEEeCCCCCce
Confidence 89999999877644
No 269
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.45 E-value=0.00037 Score=56.91 Aligned_cols=235 Identities=10% Similarity=0.012 Sum_probs=125.1
Q ss_pred ccceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccce
Q 038568 29 HMIISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQH 105 (357)
Q Consensus 29 ~~~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~ 105 (357)
...+.+|.|+ +..+++ +.+ .|.. .. +.++.-........+...+..+.+.++. ++.++.++.|.. ..+.++..
T Consensus 79 ~~~~~~i~~~~~~~~~~-g~~g~i~~-S~-DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW 154 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIV-GEPPIMLH-TT-DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNW 154 (327)
T ss_dssp CCEEEEEEEETTEEEEE-EETTEEEE-ES-STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSE
T ss_pred CccEEEEEecCCeEEEE-ECCCeEEE-EC-CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCC
Confidence 4578899998 454444 444 4433 22 4444444433211134567788876554 555555665422 12234333
Q ss_pred eeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEE-EcCcchhhhhcccccc
Q 038568 106 QLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIW-NASNYKCLESVNKAHE 183 (357)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~ 183 (357)
..+.. .....+..+.+.+ ..++..+.+|.+..- |- .++.-..+.....
T Consensus 155 ~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~ 204 (327)
T 2xbg_A 155 QALVQ-----------------------------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTS 204 (327)
T ss_dssp EEEEC-----------------------------SCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSS
T ss_pred EEeec-----------------------------CCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCC
Confidence 33221 2334677888887 445555555555443 32 1222222212345
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEEecCCeEEEEe
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSGGCDRWIVVWE 262 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 262 (357)
..+..+.+.+++.++.++.+|.+++.+.. .+. ....+..- ......+..+.+.+++..++++ .+|.| .+.
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~G~~~~s~~D------~G~-tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S 275 (327)
T 2xbg_A 205 RRLHNMGFTPDGRLWMIVNGGKIAFSDPD------NSE-NWGELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCS 275 (327)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEETT------EEE-EECCCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEE
T ss_pred CccceeEECCCCCEEEEeCCceEEEecCC------CCC-eeEeccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEe
Confidence 67888999998887777888888776421 000 11111100 0122357888998877766665 46766 444
Q ss_pred cccCCceeeeeeccCCccceEEEeec-CceEEEecCCCeEEEeeC
Q 038568 263 RERDHRMVFAEALWGHTGALLCLINV-GDLLASGSADRTVRIWQR 306 (357)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vw~~ 306 (357)
.+.++..............+.++.+. +..+++++.+|.|.-++-
T Consensus 276 ~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 276 QDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp SSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 55455433332221223445666664 446777788998776654
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.44 E-value=0.0004 Score=56.42 Aligned_cols=223 Identities=13% Similarity=0.087 Sum_probs=127.0
Q ss_pred eEEEeeCCceEEEeccCCcc-ccceeccccCCCCceEEEEEecCc--e-EEeecCCeEEEEecCCccceeeeeecCcccc
Q 038568 41 LLYAASLNEINVFDLISDYS-HVDTFSNDLSSSGSVKSITFHITK--I-FTAHQDCKIRVWKITASRQHQLVSTLPTVKD 116 (357)
Q Consensus 41 ~l~t~~~d~i~iw~~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~--l-~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 116 (357)
+|+.+....|+..++ +... ....+.. ....+.+++|.+.. | .+-...+.|..++++.......+..
T Consensus 6 ~ll~~~~~~I~~i~l-~~~~~~~~~~~~---~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~------ 75 (318)
T 3sov_A 6 LLLYANRRDLRLVDA-TNGKENATIVVG---GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------ 75 (318)
T ss_dssp EEEEECEEEEEEEET-TCTTSCCEEEEE---EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE------
T ss_pred EEEEEccCeEEEEEC-CCCceEEEEEec---CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc------
Confidence 344444338888998 5543 1111111 23456789999743 4 4445667888888876532111110
Q ss_pred ceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEec
Q 038568 117 RLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD 193 (357)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (357)
........+++.+ .++++-...+.|.++++.... ...+..........+++.|
T Consensus 76 -----------------------~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp 131 (318)
T 3sov_A 76 -----------------------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDP 131 (318)
T ss_dssp -----------------------ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEG
T ss_pred -----------------------CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeC
Confidence 1112345667765 444455567789999986432 2222123445678999998
Q ss_pred C-CeEEEEe--CCCeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEE-ecCCeEEEEecccCCc
Q 038568 194 N-GVVYTGS--ADGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERERDHR 268 (357)
Q Consensus 194 ~-~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~ 268 (357)
. +.|+... ..+.|..+++. ......+ ...-...+.|+++|++..|+.+ +..+.|..+|++....
T Consensus 132 ~~g~ly~td~~~~~~I~r~~~d-----------G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 200 (318)
T 3sov_A 132 SSGFMYWTDWGEVPKIERAGMD-----------GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 200 (318)
T ss_dssp GGTEEEEEECSSSCEEEEEETT-----------SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCEEEEEecCCCCEEEEEEcC-----------CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce
Confidence 5 5555544 35778888765 1111111 1223456899999976666555 4577899999875433
Q ss_pred eeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcc
Q 038568 269 MVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENC 311 (357)
Q Consensus 269 ~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~ 311 (357)
..... +.......++...+ ++.+-...+.|..++..+++.
T Consensus 201 ~~~~~---~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 201 QAVVK---GSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEC---SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEec---CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCc
Confidence 22221 12223345555555 556666778999999877643
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.40 E-value=0.00035 Score=54.31 Aligned_cols=198 Identities=10% Similarity=0.010 Sum_probs=121.7
Q ss_pred cccccEEEEEEec--C-eEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeE-EEEeCCCeEEEEEccccc
Q 038568 140 EHWDAVSDLVVKQ--G-LMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVV-YTGSADGRIRVWERSVVD 215 (357)
Q Consensus 140 ~~~~~v~~~~~~~--~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~ 215 (357)
+-...+..++++| + ++++...++.|...|.. ++.+..+..........+++.+++.+ ++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 4456799999998 4 45557778899999987 77777763333456788899888865 444467789998876211
Q ss_pred cccccccceeeeeEe------eccccceeEEEEecCCCEEEEEecCCeEEEEeccc---CCceeeeee--c--cCCccce
Q 038568 216 HNKERKSRHMLVTTL------VKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER---DHRMVFAEA--L--WGHTGAL 282 (357)
Q Consensus 216 ~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~--~--~~~~~~v 282 (357)
. ....... .........|+|+|.++.|+++.+.....+|.++. ...+..... + ..+....
T Consensus 103 ~-------i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~ 175 (255)
T 3qqz_A 103 E-------VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDV 175 (255)
T ss_dssp C-------EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCC
T ss_pred e-------eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCc
Confidence 1 0011111 12344578999999988777777765556665541 111111111 0 1122345
Q ss_pred EEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeec-CCc------CceEEEEEeeCCCCCCCCeEEEEEcCCCCe
Q 038568 283 LCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLE-GHE------KPVKSLVAISSSSSASNGIVSIGSGSLNGE 352 (357)
Q Consensus 283 ~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-~h~------~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~ 352 (357)
.++++++. +++.......|..+|.... ......+. +.. ..--+|+|.++++ +.++ +.-..
T Consensus 176 S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-------lyIv-sE~n~ 245 (255)
T 3qqz_A 176 SGAEFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-------IYIV-SEPNR 245 (255)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-------EEEE-ETTTE
T ss_pred eeEEEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCC-------EEEE-cCCce
Confidence 77788776 7777778889999997643 22223333 211 2457999999987 5555 44445
Q ss_pred EEe
Q 038568 353 IKV 355 (357)
Q Consensus 353 v~~ 355 (357)
+..
T Consensus 246 ~y~ 248 (255)
T 3qqz_A 246 FYR 248 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.36 E-value=0.0006 Score=55.11 Aligned_cols=226 Identities=11% Similarity=0.045 Sum_probs=123.0
Q ss_pred ccccceecccccCCCCCCCccceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-e
Q 038568 10 EAFKHHCIASLKIPSPDPHHMIISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-I 85 (357)
Q Consensus 10 ~~~~~~~~~~~~~~~g~~h~~~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l 85 (357)
.....+.+..+. -......++++ ++++++-..+ .|..||. +. +....+. ....+..+++.+++ |
T Consensus 18 ~~~~~~~~~~~p------~~~~pegia~~~~g~lyv~d~~~~~I~~~d~-~g-~~~~~~~----~~~~p~gia~~~dG~l 85 (306)
T 2p4o_A 18 ELAPAKIITSFP------VNTFLENLASAPDGTIFVTNHEVGEIVSITP-DG-NQQIHAT----VEGKVSGLAFTSNGDL 85 (306)
T ss_dssp CCCCEEEEEEEC------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC-CEEEEEE----CSSEEEEEEECTTSCE
T ss_pred cCCCceEeEeCC------CCCCcceEEECCCCCEEEEeCCCCeEEEECC-CC-ceEEEEe----CCCCceeEEEcCCCcE
Confidence 344555666664 22567789998 6666665566 9999998 54 3333333 44578899999887 5
Q ss_pred EEeec--CC-eEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEE-ec
Q 038568 86 FTAHQ--DC-KIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSV-SW 160 (357)
Q Consensus 86 ~~~~~--d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~-~~ 160 (357)
+.+.. ++ .|..++..+++... +...+. ......++..+ ..++.. ..
T Consensus 86 ~vad~~~~~~~v~~~d~~~g~~~~-~~~~~~----------------------------~~~~~g~~~~~~~~~~v~d~~ 136 (306)
T 2p4o_A 86 VATGWNADSIPVVSLVKSDGTVET-LLTLPD----------------------------AIFLNGITPLSDTQYLTADSY 136 (306)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEE-EEECTT----------------------------CSCEEEEEESSSSEEEEEETT
T ss_pred EEEeccCCcceEEEEcCCCCeEEE-EEeCCC----------------------------ccccCcccccCCCcEEEEECC
Confidence 55542 22 46666766654322 211110 01112223233 333333 35
Q ss_pred CCeEEEEEcCcch--hh------hh-ccccccccEEEEEEecCC-e-EEEEeCCCeEEEEEccccccccccccceeeeeE
Q 038568 161 DRSFKIWNASNYK--CL------ES-VNKAHEDAVNAVVVSDNG-V-VYTGSADGRIRVWERSVVDHNKERKSRHMLVTT 229 (357)
Q Consensus 161 dg~i~iwd~~~~~--~~------~~-~~~~~~~~v~~~~~~~~~-~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 229 (357)
++.|..+|..+++ .. .. .....-...+.+ ++++ . +++-...+.|..|++... +. ......
T Consensus 137 ~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~-----g~--~~~~~~ 207 (306)
T 2p4o_A 137 RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDST-----DK--PGEPEI 207 (306)
T ss_dssp TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTT-----SC--BCCCEE
T ss_pred CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCC-----CC--CCccEE
Confidence 7888888876431 11 00 001111234455 6666 4 455566789999998621 00 000111
Q ss_pred eeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeec
Q 038568 230 LVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288 (357)
Q Consensus 230 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 288 (357)
+.. ......++++++|+++++....+.|.++|.. ++.. .............++++.
T Consensus 208 ~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~-~~~~~~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 208 FVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTT-IIAQAEQGVIGSTAVAFG 263 (306)
T ss_dssp EEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEE-EEECGGGTCTTEEEEEEC
T ss_pred Eec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEE-EEeecccccCCceEEEEe
Confidence 111 1345779999999877777778899999975 4321 122222222446777776
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.35 E-value=0.00083 Score=56.24 Aligned_cols=189 Identities=13% Similarity=-0.007 Sum_probs=106.8
Q ss_pred ccEEEEEEec--CeEE-EEecCCeEEEEEcCcchhhhhccccccccEEEEEEecC-Ce-EEEEeCCCeEEEEEccccccc
Q 038568 143 DAVSDLVVKQ--GLMY-SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDN-GV-VYTGSADGRIRVWERSVVDHN 217 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~ 217 (357)
.....++|.+ +.|+ +-...+.|..+++........+ .........+++.+. +. +++-...+.|.+.++.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d----- 189 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD----- 189 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE-CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT-----
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE-eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC-----
Confidence 3577899986 4444 4456788999998765432222 222234567888864 44 4555567788888765
Q ss_pred cccccceeeeeEeeccccceeEEEEecCCCEEEEEec-C-CeEEEEecccCCceeeeeeccCCccceEEEeecC--c-eE
Q 038568 218 KERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC-D-RWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D-LL 292 (357)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l 292 (357)
. ..........-.....++++|.+..|+.... + +.|..+++.......... ..-.....+++++ . +.
T Consensus 190 -g----~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGlavd~~~~~lY 261 (386)
T 3v65_B 190 -G----AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYAGRRMY 261 (386)
T ss_dssp -S----CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEEGGGTEEE
T ss_pred -C----CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE---CCCCCeeeEEEeCCCCEEE
Confidence 1 1111112223345789999997666655543 4 678888887543222211 1222345667663 3 45
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
++-...+.|..+++..... + ..+........+|++. .+. ++++-...+.|..+
T Consensus 262 ~aD~~~~~I~~~d~dG~~~-~--~~~~~~~~~P~giav~-~~~-------ly~td~~~~~V~~~ 314 (386)
T 3v65_B 262 WVDAKHHVIERANLDGSHR-K--AVISQGLPHPFAITVF-EDS-------LYWTDWHTKSINSA 314 (386)
T ss_dssp EEETTTTEEEEECTTSCSC-E--EEECSSCSSEEEEEEE-TTE-------EEEEETTTTEEEEE
T ss_pred EEECCCCEEEEEeCCCCee-E--EEEECCCCCceEEEEE-CCE-------EEEeeCCCCeEEEE
Confidence 5556678899999875321 1 1222223445777773 333 55555556666543
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.31 E-value=0.00078 Score=54.44 Aligned_cols=218 Identities=12% Similarity=0.050 Sum_probs=115.6
Q ss_pred CceEEEEEecCc-eEEe-ecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE
Q 038568 73 GSVKSITFHITK-IFTA-HQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150 (357)
Q Consensus 73 ~~v~~l~~~~~~-l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 150 (357)
.....++|.+++ |+.+ ..++.|..||.... ..... ........+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-------------------------------~~~~~p~gia~ 79 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-------------------------------TVEGKVSGLAF 79 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-------------------------------ECSSEEEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-------------------------------eCCCCceeEEE
Confidence 567789999877 5544 46788999987643 21111 11235778888
Q ss_pred ec-CeEEEEec--CC-eEEEEEcCcchhhhhccccccccEEEEEEecCCeEE-EEeCCCeEEEEEcccccccccccccee
Q 038568 151 KQ-GLMYSVSW--DR-SFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVY-TGSADGRIRVWERSVVDHNKERKSRHM 225 (357)
Q Consensus 151 ~~-~~l~~~~~--dg-~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~ 225 (357)
.+ ..++.+.. ++ .|..+|..+++...............++..+++.++ +-..++.|..+|.... . ..
T Consensus 80 ~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~------~--~~ 151 (306)
T 2p4o_A 80 TSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP------S--GS 151 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT------E--EE
T ss_pred cCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC------c--Ee
Confidence 88 43444442 22 466677666654322211122233455555666544 4445888888887511 0 00
Q ss_pred eee--------EeeccccceeEEEEecCCCEEEEE-ecCCeEEEEecccCCceeeeeeccCCccce--EEEeecCceEEE
Q 038568 226 LVT--------TLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERERDHRMVFAEALWGHTGAL--LCLINVGDLLAS 294 (357)
Q Consensus 226 ~~~--------~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v--~~~~~~~~~l~~ 294 (357)
... .....-...+.+ +|+++.|+.+ ...+.|..|++.....+.....+... ... .++..+++++++
T Consensus 152 v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 152 IWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBTTCCEEEE
T ss_pred EEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECCCCCEEEE
Confidence 000 000111234455 7888766555 45788999998752111111111000 112 334444556666
Q ss_pred ecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEe---eCCC
Q 038568 295 GSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAI---SSSS 335 (357)
Q Consensus 295 ~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~ 335 (357)
....+.|.+++.. ++ ...+..+.......++++|. |++.
T Consensus 229 ~~~~~~V~~~~~~-G~-~~~~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 229 THIYNSVVRIAPD-RS-TTIIAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp CBTTCCEEEECTT-CC-EEEEECGGGTCTTEEEEEECCSTTTTT
T ss_pred eCCCCeEEEECCC-CC-EEEEeecccccCCceEEEEecccCCCC
Confidence 6667889999875 32 12222333333568899998 7765
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.26 E-value=0.0012 Score=54.35 Aligned_cols=188 Identities=12% Similarity=-0.026 Sum_probs=106.5
Q ss_pred ccEEEEEEec--CeEEEE-ecCCeEEEEEcCcchhhhhccccccccEEEEEEecC-Ce-EEEEeCCCeEEEEEccccccc
Q 038568 143 DAVSDLVVKQ--GLMYSV-SWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDN-GV-VYTGSADGRIRVWERSVVDHN 217 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~~~~ 217 (357)
.....++|++ +.|+.+ ...+.|..+++........+ .........+++.+. +. +++-...+.|.+.++.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~-~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~d----- 146 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV-STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD----- 146 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE-eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCC-----
Confidence 3467889986 555544 45788999998765432222 222234567888864 44 4555667889999876
Q ss_pred cccccceeeeeEeeccccceeEEEEecCCCEEEEEe-cC-CeEEEEecccCCceeeeeeccCCccceEEEeecC--c-eE
Q 038568 218 KERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-CD-RWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D-LL 292 (357)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l 292 (357)
.. .........-.....++++|.+..|+... .+ +.|..++++........ ...-.....+++++ . +.
T Consensus 147 -G~----~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~---~~~~~~PnGla~d~~~~~lY 218 (349)
T 3v64_C 147 -GA----HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA---DTHLFWPNGLTIDYAGRRMY 218 (349)
T ss_dssp -SC----SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC---CSSCSCEEEEEEETTTTEEE
T ss_pred -CC----ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE---ECCCCCcceEEEeCCCCEEE
Confidence 11 11111222334568999999666555444 44 78888888754322111 11223346677764 3 44
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
++-...+.|..+++..... +. .+........++++. .+. ++++-...+.|..
T Consensus 219 ~aD~~~~~I~~~~~dG~~~-~~--~~~~~~~~P~giav~-~~~-------ly~td~~~~~V~~ 270 (349)
T 3v64_C 219 WVDAKHHVIERANLDGSHR-KA--VISQGLPHPFAITVF-EDS-------LYWTDWHTKSINS 270 (349)
T ss_dssp EEETTTTEEEEEETTSCSC-EE--EECSSCSSEEEEEEE-TTE-------EEEEETTTTEEEE
T ss_pred EEECCCCEEEEEeCCCCce-EE--EEeCCCCCceEEEEE-CCE-------EEEecCCCCeEEE
Confidence 5555678899999875321 11 122223445677773 332 4555545555544
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.22 E-value=4.5e-05 Score=68.83 Aligned_cols=185 Identities=9% Similarity=0.042 Sum_probs=89.8
Q ss_pred EEEEec--CeEEEEec-CCeEEEEEcCcchhhhhccccccccEEEEEEecCCe-EEEEe-CC-----CeEEEEEcccccc
Q 038568 147 DLVVKQ--GLMYSVSW-DRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGV-VYTGS-AD-----GRIRVWERSVVDH 216 (357)
Q Consensus 147 ~~~~~~--~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~-~d-----~~i~i~d~~~~~~ 216 (357)
++++.. .+++.|+. +..+.+||..+.+-...-.......-.+++..++++ ++.|+ .+ ..+.+||..+.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~-- 324 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK-- 324 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT--
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC--
Confidence 344444 66777773 458999998765422211011122223455556774 66666 34 56889998621
Q ss_pred ccccccceeeee-----EeeccccceeEEEEecCCCEEEEEecC---------CeEEEEecccCCceeeeeeccC-----
Q 038568 217 NKERKSRHMLVT-----TLVKHRSTVNALALNGDGSLLFSGGCD---------RWIVVWERERDHRMVFAEALWG----- 277 (357)
Q Consensus 217 ~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g~i~vwd~~~~~~~~~~~~~~~----- 277 (357)
....+. .+..... ...+..+++.++.|+.+ ..+..||..+............
T Consensus 325 ------~W~~~~~~~~~p~~~~~~---~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~ 395 (656)
T 1k3i_A 325 ------TWTSLPNAKVNPMLTADK---QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA 395 (656)
T ss_dssp ------EEEEETTSCSGGGCCCCT---TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC
T ss_pred ------cceeCCCccccccccccc---cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC
Confidence 111110 0000000 01122344444555444 3567888876653222211111
Q ss_pred -CccceEEEe---ecCceEEEecCCC-----------eEEEeeCCCCcceeeeeeecCCcCc-eEEEEEeeCCCCCCCCe
Q 038568 278 -HTGALLCLI---NVGDLLASGSADR-----------TVRIWQRGKENCYRCMAFLEGHEKP-VKSLVAISSSSSASNGI 341 (357)
Q Consensus 278 -~~~~v~~~~---~~~~~l~~~~~dg-----------~i~vw~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~ 341 (357)
....-.++. ..+.+++.|+.++ .|.+||..+.. +..+..-..+... -.++...|+++
T Consensus 396 ~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~mp~~R~~~~~~~l~~g~------ 468 (656)
T 1k3i_A 396 PDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP-NTVFASNGLYFARTFHTSVVLPDGS------ 468 (656)
T ss_dssp CCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC-EEEECTTCCSSCCBSCEEEECTTSC------
T ss_pred CCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC-eeEEccCCCCCCcccCCeEECCCCC------
Confidence 011122332 3455788887543 68888887753 2222200112222 23456677887
Q ss_pred EEEEEcCCC
Q 038568 342 VSIGSGSLN 350 (357)
Q Consensus 342 ~~l~s~~~d 350 (357)
+++.||.+
T Consensus 469 -i~v~GG~~ 476 (656)
T 1k3i_A 469 -TFITGGQR 476 (656)
T ss_dssp -EEEECCBS
T ss_pred -EEEECCcc
Confidence 88888854
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0021 Score=54.63 Aligned_cols=149 Identities=9% Similarity=0.116 Sum_probs=86.1
Q ss_pred ceEEEEEecC--c-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEE
Q 038568 74 SVKSITFHIT--K-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVV 150 (357)
Q Consensus 74 ~v~~l~~~~~--~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 150 (357)
....|+++|. + |+.+...+.|+.+|+..+...... ........+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-------------------------------~~~~~P~~ia~ 186 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-------------------------------SGLSKVRTICW 186 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-------------------------------CCCSCEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-------------------------------cCCCCcceEEE
Confidence 4567888862 3 666655578888888765432221 12245678888
Q ss_pred ec--CeEEEEec-CC----eEEEEEcCcchhh--hhccccccccEEEEEEec-CCeEE-EEeCCCeEEEEEccccccccc
Q 038568 151 KQ--GLMYSVSW-DR----SFKIWNASNYKCL--ESVNKAHEDAVNAVVVSD-NGVVY-TGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 151 ~~--~~l~~~~~-dg----~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~l~-~~~~d~~i~i~d~~~~~~~~~ 219 (357)
++ +.|+.+.. ++ .+...+ ..+... ..+ ........++++| ++.|+ +-..++.|..++.. .
T Consensus 187 d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l--~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~------~ 257 (430)
T 3tc9_A 187 THEADSMIITNDQNNNDRPNNYILT-RESGFKVITEL--TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFT------T 257 (430)
T ss_dssp CTTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEE--EECSSCCCEEECTTTCCEEEEETTTTEEEEEETT------T
T ss_pred eCCCCEEEEEeCCCCcccceEEEEe-CCCceeeeeee--ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECC------C
Confidence 88 54555554 22 233334 333322 122 1233456788999 66644 44567889999976 1
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEE-EecCCeEEEEeccc
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFS-GGCDRWIVVWERER 265 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~vwd~~~ 265 (357)
.. ...+... ........++|+|++++|+. -...+.|..++.+.
T Consensus 258 ~~--~~~~~~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 258 QE--TTPLFTI-QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TE--EEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred Cc--EEEEEEc-CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 11 1111111 11234678999999995544 45678899988763
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.16 E-value=0.0044 Score=56.79 Aligned_cols=228 Identities=11% Similarity=0.074 Sum_probs=127.0
Q ss_pred eEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecC-c--eEEeecCCeEEEEecCCccceeeeeecCccccc
Q 038568 41 LLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT-K--IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDR 117 (357)
Q Consensus 41 ~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~--l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 117 (357)
+|+.+....|+..++ ........+. ....+..|+|.+. + +++-...+.|+.+++...........+
T Consensus 397 ~Ll~an~~~Ir~i~l-~~~~~~~l~~----~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v------ 465 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTL-DRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV------ 465 (791)
T ss_dssp EEEEECBSSEEEECT-TSCCCEEEEC----SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE------
T ss_pred ccccccccceeEeec-cCCcceeeec----CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE------
Confidence 444444447788887 5544333333 4566789999874 3 444455678888888653210000000
Q ss_pred eeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecC
Q 038568 118 LIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDN 194 (357)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 194 (357)
+.........|++.. +++++-...+.|.+.++.... ...+..........|++.|.
T Consensus 466 --------------------i~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 466 --------------------ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp --------------------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETT
T ss_pred --------------------EecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecC
Confidence 001223445677765 445555567889999986433 33331334456789999986
Q ss_pred -CeEEEEe-C-CCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe-cCCeEEEEecccCCcee
Q 038568 195 -GVVYTGS-A-DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERDHRMV 270 (357)
Q Consensus 195 -~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~ 270 (357)
+.|+... . .+.|...++. ...........-.....|++++.+..|+.+. ..+.|..+++.......
T Consensus 525 ~g~LYwtD~g~~~~I~~~~~d----------G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 525 HGFMYWTDWGTPAKIKKGGLN----------GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp TTEEEEEECSSSCEEEEEETT----------SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCEEEecCCCCCeEEEEecC----------CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 5555443 2 3678888875 1111111222235678999998666666554 46789999987554333
Q ss_pred eeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcc
Q 038568 271 FAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENC 311 (357)
Q Consensus 271 ~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~ 311 (357)
.... ...-.....++..++ ++++-...+.|...+..+++.
T Consensus 595 v~~~-~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 595 ILED-EKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEC-TTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCC
T ss_pred EecC-CCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcc
Confidence 3221 111122345666666 555555678888888777643
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.11 E-value=0.0023 Score=51.88 Aligned_cols=192 Identities=12% Similarity=-0.042 Sum_probs=105.7
Q ss_pred ccEEEEEEec--CeEEEE-ecCCeEEEEEcCcc---hhhhhccccccccEEEEEEec-CCe-EEEEeCCCeEEEEEcccc
Q 038568 143 DAVSDLVVKQ--GLMYSV-SWDRSFKIWNASNY---KCLESVNKAHEDAVNAVVVSD-NGV-VYTGSADGRIRVWERSVV 214 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~~~-~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~d~~i~i~d~~~~ 214 (357)
.....++|++ +.|+.+ ..++.|..+++... .....+....-.....+++.+ .+. +++-...+.|.++++.
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~-- 107 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-- 107 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC--
Confidence 4567888987 445444 45689999998751 222222122223457888886 444 4455667899999875
Q ss_pred ccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC--CeEEEEecccCCceeeeeeccCCccceEEEeecC--c
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD--RWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D 290 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~ 290 (357)
. ................++++|.+..|+.+... +.|..+++...... .+.. ..-.....+++++ .
T Consensus 108 ----g----~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~-~~~~--~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 108 ----G----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLVT--ENIQWPNGITLDLLSG 176 (316)
T ss_dssp ----S----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEEC--SSCSCEEEEEEETTTT
T ss_pred ----C----CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE-EEEE--CCCCCceEEEEeccCC
Confidence 1 11111122233456899999966655555443 68888888643321 1111 1223345667764 3
Q ss_pred -eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 291 -LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 291 -~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
++++-...+.|..+|+.... .+.+...........++++.. +. ++++-...+.|..+
T Consensus 177 ~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~~-~~-------ly~~d~~~~~V~~~ 234 (316)
T 1ijq_A 177 RLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFE-DK-------VFWTDIINEAIFSA 234 (316)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEET-TE-------EEEEETTTTEEEEE
T ss_pred EEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEEC-CE-------EEEEECCCCeEEEE
Confidence 44555567899999987532 233322222223456777743 33 55555556666554
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.09 E-value=3.2e-05 Score=70.02 Aligned_cols=220 Identities=12% Similarity=0.076 Sum_probs=116.9
Q ss_pred EEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEe-ecCCeEEEEecCCc----cceeeeeecCcc
Q 038568 42 LYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTA-HQDCKIRVWKITAS----RQHQLVSTLPTV 114 (357)
Q Consensus 42 l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~-~~d~~i~vwd~~~~----~~~~~~~~~~~~ 114 (357)
|+.+....|+..++ ++.+....+. ....+..|+|.+.. |+.+ ...+.|+.+++.+. .....+.
T Consensus 380 ll~~~~~~I~~id~-~~~~~~~~~~----~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~----- 449 (699)
T 1n7d_A 380 LFFTNRHEVRKMTL-DRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----- 449 (699)
T ss_dssp BCCCCTTC-CEECT-TSCCEECCSC----CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC-----
T ss_pred EEecCccceEEEeC-CCCcceeeec----cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe-----
Confidence 33333337777787 6544444333 33456688898743 5544 34578888887651 1111000
Q ss_pred ccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEE
Q 038568 115 KDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVV 191 (357)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 191 (357)
........+++.+ .++++-...+.|.++++........+ .........+++
T Consensus 450 -------------------------~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-~~~~~~P~giav 503 (699)
T 1n7d_A 450 -------------------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-REQGSKPRAIVV 503 (699)
T ss_dssp -------------------------SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEEC-CCSSCCCCCEEC
T ss_pred -------------------------CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEE-eCCCCCcceEEE
Confidence 0111233456653 34444455678999987654322222 222344577888
Q ss_pred ecCC-eEEEEeC--CCeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEE-EEEecCCeEEEEecccC
Q 038568 192 SDNG-VVYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLL-FSGGCDRWIVVWERERD 266 (357)
Q Consensus 192 ~~~~-~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~ 266 (357)
+|.+ +|+.+.. .+.|..+++. . .....+ ...-...+.|+|+|++..| ++-...+.|.++++...
T Consensus 504 Dp~~g~ly~td~~~~~~I~~~~~d------G-----~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 504 DPVHGFMYWTDWGTPAKIKKGGLN------G-----VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CSSSSCCEECCCSSSCCEEBCCSS------S-----CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred ccCCCcEEEcccCCCCeEEEEeCC------C-----CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 8854 5444432 2677777664 1 111111 1122346789999875544 44456778999999754
Q ss_pred CceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCC
Q 038568 267 HRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 267 ~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~ 309 (357)
...... ...........+++.++ ++++....+.|..++..++
T Consensus 573 ~~~~~~-~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 573 NRKTIL-EDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp CCEEEC-CCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred ceEEEE-ecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 332222 11111122233444555 5566666789999998776
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.07 E-value=0.0011 Score=60.77 Aligned_cols=193 Identities=11% Similarity=0.108 Sum_probs=103.0
Q ss_pred cEEEEEEe-c--CeEEEE-ecCC----eEEEEEcCcc-hhhhhccccccccEEEEEEecCC-eEEEEeCC-----CeEEE
Q 038568 144 AVSDLVVK-Q--GLMYSV-SWDR----SFKIWNASNY-KCLESVNKAHEDAVNAVVVSDNG-VVYTGSAD-----GRIRV 208 (357)
Q Consensus 144 ~v~~~~~~-~--~~l~~~-~~dg----~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d-----~~i~i 208 (357)
.+....|+ | ++|+-+ +.+| .|+++|+.++ +.+... .......+.|+||+ .|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~---~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK---VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC---EEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc---ccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67889999 8 555543 3333 4999999988 633211 11223568899998 45555544 25777
Q ss_pred EEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEec---CCeEEEEecccCC-ceeeeeeccCCccceEE
Q 038568 209 WERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC---DRWIVVWERERDH-RMVFAEALWGHTGALLC 284 (357)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~ 284 (357)
+++. ........+... ........+.|+|||++|+..+. ...|+++|+.++. .................
T Consensus 252 ~~lg------t~~~~~~lv~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s 324 (751)
T 2xe4_A 252 HVMG------KLQSEDVCLYEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYD 324 (751)
T ss_dssp EETT------SCGGGCEEEEEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEE
T ss_pred EECC------CCchhcEEEEec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEE
Confidence 7765 211111222211 22234567899999998887653 4468889988652 11001112223344455
Q ss_pred Ee-ecCc-eEEEecCC----CeEEEeeCCCCcceeeeeeecCCcC--ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 285 LI-NVGD-LLASGSAD----RTVRIWQRGKENCYRCMAFLEGHEK--PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 285 ~~-~~~~-~l~~~~~d----g~i~vw~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
.. ..++ +++....+ ..|..+++.++..++.. +-.+.. .+..+.+. +. .++++...||..++|
T Consensus 325 ~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~~~--~~------~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 325 VQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIAVR--SN------YLVVAGRRAGLTRIW 394 (751)
T ss_dssp EEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEEEC--SS------EEEEEEEETTEEEEE
T ss_pred EeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEEEE--CC------EEEEEEEeCCEEEEE
Confidence 55 2355 33443333 36677777643222220 122222 34455543 33 266677777765554
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.02 E-value=0.0027 Score=49.36 Aligned_cols=201 Identities=9% Similarity=0.078 Sum_probs=120.2
Q ss_pred CccceeEEEEe--cceEE-EeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-e-EEeecCCeEEEEecCC
Q 038568 28 HHMIISCLAVH--NSLLY-AASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-I-FTAHQDCKIRVWKITA 101 (357)
Q Consensus 28 h~~~i~~~~~s--~~~l~-t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l-~~~~~d~~i~vwd~~~ 101 (357)
-.+.+..++|+ ++.|+ +...+ .|...|. . ++.++.+.- .-......|++.+++ + ++.-.++.+.++++..
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~-~-g~v~~~i~l--~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTT-N-GDLIRTIPL--DFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEET-T-CCEEEEEEC--SSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeC-C-CCEEEEEec--CCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 55679999999 45454 45566 9999998 5 777777642 123567888888877 4 4434567888988876
Q ss_pred ccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEecCCeEEEEEcCc---chhhh
Q 038568 102 SRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVSWDRSFKIWNASN---YKCLE 176 (357)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~---~~~~~ 176 (357)
............ . ............+++++ +.|+++.......+|.+.. ...+.
T Consensus 101 ~~~i~~~~~~~~-~--------------------~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~ 159 (255)
T 3qqz_A 101 NSEVKILKKIKI-P--------------------LQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELH 159 (255)
T ss_dssp TCCEEEEEEEEC-C--------------------CSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCE
T ss_pred CCeeeeeeeecc-c--------------------cccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCcee
Confidence 543222211100 0 00012345578999999 5677776665556665541 11111
Q ss_pred hc------cccccccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeec-c------ccceeEEE
Q 038568 177 SV------NKAHEDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK-H------RSTVNALA 241 (357)
Q Consensus 177 ~~------~~~~~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~------~~~v~~~~ 241 (357)
.+ .......+.+++++|.. .++.......+..+|.. . .......+.. . -.....|+
T Consensus 160 i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~------g---~~~~~~~L~~g~~~l~~~~~qpEGia 230 (255)
T 3qqz_A 160 ISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV------G---EVIGEMSLTKGSRGLSHNIKQAEGVA 230 (255)
T ss_dssp EEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT------C---CEEEEEECSTTGGGCSSCCCSEEEEE
T ss_pred eecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC------C---CEEEEEEcCCccCCcccccCCCCeeE
Confidence 11 01123457899999976 46677778889999976 1 1112222221 1 12567899
Q ss_pred EecCCCEEEEEecCCeEEEEec
Q 038568 242 LNGDGSLLFSGGCDRWIVVWER 263 (357)
Q Consensus 242 ~~~~~~~l~~~~~dg~i~vwd~ 263 (357)
|.++|++. ..++-+.+++|.-
T Consensus 231 ~d~~G~ly-IvsE~n~~y~f~~ 251 (255)
T 3qqz_A 231 MDASGNIY-IVSEPNRFYRFTP 251 (255)
T ss_dssp ECTTCCEE-EEETTTEEEEEEC
T ss_pred ECCCCCEE-EEcCCceEEEEEe
Confidence 99999844 4477777777654
No 283
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.01 E-value=0.0042 Score=51.22 Aligned_cols=229 Identities=12% Similarity=0.069 Sum_probs=113.1
Q ss_pred CceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe
Q 038568 73 GSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151 (357)
Q Consensus 73 ~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 151 (357)
.....|+|.|++ |+.+..+|.|.+++ .++ ...+...+ ++.........++++
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~-~~~~~~~~------------------------v~~~g~~~p~gia~~ 83 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGR-LSTYAELS------------------------VYHRGESGLLGLALH 83 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTE-EEEEEECC------------------------CCCSTTCSEEEEEEC
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCC-ccEeecce------------------------EeecCCCCceeEEEC
Confidence 346789999997 77777889999998 332 12221111 001223456788888
Q ss_pred cC-----eEEEEecC------CeEEEEEcCcc-----hhh-hhcc--ccccccEEEEEEecCCeEEEEeCC---------
Q 038568 152 QG-----LMYSVSWD------RSFKIWNASNY-----KCL-ESVN--KAHEDAVNAVVVSDNGVVYTGSAD--------- 203 (357)
Q Consensus 152 ~~-----~l~~~~~d------g~i~iwd~~~~-----~~~-~~~~--~~~~~~v~~~~~~~~~~l~~~~~d--------- 203 (357)
|+ .|+.+... +.|..++...+ +.+ ..+. .........++|.|+|.|..+..+
T Consensus 84 pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d 163 (352)
T 2ism_A 84 PRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQD 163 (352)
T ss_dssp TTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGC
T ss_pred CCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccC
Confidence 74 55555432 56777776532 111 1121 011123468999999965544321
Q ss_pred -----CeEEEEEcccccccccccc-----ceeeeeEeeccccceeEEEEec-CCCEEEEEecCCe--------EEEEecc
Q 038568 204 -----GRIRVWERSVVDHNKERKS-----RHMLVTTLVKHRSTVNALALNG-DGSLLFSGGCDRW--------IVVWERE 264 (357)
Q Consensus 204 -----~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~--------i~vwd~~ 264 (357)
|.|.-++... ....... .........++. ....++|+| +++++++-...+. |.+. .
T Consensus 164 ~~~~~g~I~ri~~dG--~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~ 238 (352)
T 2ism_A 164 LASLGGKILRLTPEG--EPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--V 238 (352)
T ss_dssp TTCSSSEEEEECTTS--SBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEE--C
T ss_pred CCCCceEEEEEcCCC--CCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--c
Confidence 4565555431 0000000 000111112332 357899999 5664444332222 3332 2
Q ss_pred cCCc---------------eeeeeeccCCccceEEEee-cCceEEEecCCCeEEEeeCCCCcc---e-eeeeeecCCcCc
Q 038568 265 RDHR---------------MVFAEALWGHTGALLCLIN-VGDLLASGSADRTVRIWQRGKENC---Y-RCMAFLEGHEKP 324 (357)
Q Consensus 265 ~~~~---------------~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vw~~~~~~~---~-~~~~~~~~h~~~ 324 (357)
.+.. ..+...+..|. ....+++ .++++++.-..+.|...++..... . .....+. -...
T Consensus 239 ~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~-ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~r 316 (352)
T 2ism_A 239 PGGNYGWPRVVGRGNDPRYRDPLYFWPQGF-PPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-GFGR 316 (352)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECTTCC-CEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-SSCC
T ss_pred cCCcCCCCcccCCCCCCCCcCCeEecCCCC-CCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-cCCC
Confidence 2210 01111222222 2334444 445666666677788877764321 0 1112222 2357
Q ss_pred eEEEEEeeCCC
Q 038568 325 VKSLVAISSSS 335 (357)
Q Consensus 325 v~~~~~~~~~~ 335 (357)
+..+++.||+.
T Consensus 317 p~~v~~~pdG~ 327 (352)
T 2ism_A 317 LREVQVGPDGA 327 (352)
T ss_dssp EEEEEECTTSC
T ss_pred eeEEEECCCCc
Confidence 89999999987
No 284
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.94 E-value=0.0041 Score=51.36 Aligned_cols=57 Identities=9% Similarity=-0.126 Sum_probs=30.1
Q ss_pred eEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCC------eEEEeeCCCCcceee
Q 038568 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADR------TVRIWQRGKENCYRC 314 (357)
Q Consensus 257 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg------~i~vw~~~~~~~~~~ 314 (357)
.+.+||+.+.+- ..+..+........++...+.+++.|+.++ .|.++++++++..+.
T Consensus 286 ~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKW-DKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---C-EEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCce-eeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 578899886542 233333322333345556677777787543 466668887754433
No 285
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.92 E-value=0.0056 Score=49.65 Aligned_cols=190 Identities=12% Similarity=0.012 Sum_probs=106.8
Q ss_pred ccEEEEEEec--CeEE-EEecCCeEEEEEcCcchhhhhccccccccEEEEEEec-CCe-EEEEeCCCeEEEEEccccccc
Q 038568 143 DAVSDLVVKQ--GLMY-SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD-NGV-VYTGSADGRIRVWERSVVDHN 217 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~d~~i~i~d~~~~~~~ 217 (357)
.....+.|.+ +.|+ +-...+.|..+++........+....-.....+++.+ .+. +++-...+.|.++++.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~d----- 109 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD----- 109 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECC-----
Confidence 3566888887 4444 4455678999998765322222122223456788886 444 4555567889999876
Q ss_pred cccccceeeeeEeeccccceeEEEEecCCCEEEEEe--cCCeEEEEecccCCceeeeeeccCCccceEEEeecC--c-eE
Q 038568 218 KERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG--CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D-LL 292 (357)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l 292 (357)
. ................++++|.+..|+... ..+.|...+++......... ..-.....+++++ . +.
T Consensus 110 -G----~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~l~~Pnglavd~~~~~lY 181 (318)
T 3sov_A 110 -G----SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN---SEIYWPNGLTLDYEEQKLY 181 (318)
T ss_dssp -S----CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEETTTTEEE
T ss_pred -C----CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE---CCCCCccEEEEeccCCEEE
Confidence 1 111111123334568999999766666555 25788888887433221111 1122345667764 3 45
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
++-...+.|..+++.... .+.+. .+......++++..+ . ++.+-...+.|..+
T Consensus 182 ~aD~~~~~I~~~d~dG~~-~~~~~--~~~~~~P~glav~~~-~-------lywtd~~~~~V~~~ 234 (318)
T 3sov_A 182 WADAKLNFIHKSNLDGTN-RQAVV--KGSLPHPFALTLFED-I-------LYWTDWSTHSILAC 234 (318)
T ss_dssp EEETTTTEEEEEETTSCS-CEEEE--CSCCSCEEEEEEETT-E-------EEEEETTTTEEEEE
T ss_pred EEECCCCEEEEEcCCCCc-eEEEe--cCCCCCceEEEEeCC-E-------EEEEecCCCeEEEE
Confidence 555667899999987532 12222 223344567776533 2 45555455555543
No 286
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.87 E-value=0.0069 Score=49.10 Aligned_cols=188 Identities=11% Similarity=0.134 Sum_probs=110.9
Q ss_pred CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecC----C-e--EE--EEeC--CCeEEEEEccccccccccc
Q 038568 153 GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDN----G-V--VY--TGSA--DGRIRVWERSVVDHNKERK 221 (357)
Q Consensus 153 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~----~-~--l~--~~~~--d~~i~i~d~~~~~~~~~~~ 221 (357)
.+++.....+-+.+||+ +++.+..+ .. ..++.+..-|+ + . ++ +... +++|++|++.. ..
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~-~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp------~~ 110 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSY-NT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG------KN 110 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEE-CC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT------TT
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEc-cC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC------CC
Confidence 56677777889999999 88888877 22 45666666553 2 1 33 3333 57999997741 01
Q ss_pred cceeeeeEee-------ccccceeEEEE--ecC-CC-EEEEEecCCeEEEEecccC----CceeeeeeccCCccceEEEe
Q 038568 222 SRHMLVTTLV-------KHRSTVNALAL--NGD-GS-LLFSGGCDRWIVVWERERD----HRMVFAEALWGHTGALLCLI 286 (357)
Q Consensus 222 ~~~~~~~~~~-------~~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~v~~~~ 286 (357)
..+..+. .....+..+++ +|. ++ ++++...+|.+..|++... ......+.+.- ...+-.+.
T Consensus 111 ---~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~Egcv 186 (355)
T 3amr_A 111 ---GTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMA 186 (355)
T ss_dssp ---CCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEE
T ss_pred ---CceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEE
Confidence 0122221 11155677777 664 44 6888889999999998532 11223334332 33555666
Q ss_pred ecCc--eEEEecCCCeEEEeeCCCC--cceeeeeeec-CC-cCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 287 NVGD--LLASGSADRTVRIWQRGKE--NCYRCMAFLE-GH-EKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 287 ~~~~--~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~-~h-~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.++. .|+.+-++.-|..++.+.. ...+.+.... ++ ...+..|+..+... ..+++|+|+-.+.++.+||
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~---g~gyLivSsQG~~s~~Vyd 260 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD---GKGYLMASSQGNSSYAIYD 260 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG---GCEEEEEEEGGGTEEEEEE
T ss_pred EcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC---CCEEEEEEcCCCCEEEEEE
Confidence 6654 8999999877777775422 1224444432 22 23688998865431 0123555654677887775
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.86 E-value=0.0098 Score=50.54 Aligned_cols=150 Identities=10% Similarity=0.085 Sum_probs=81.7
Q ss_pred ceEEEEEecC---c-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEE
Q 038568 74 SVKSITFHIT---K-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV 149 (357)
Q Consensus 74 ~v~~l~~~~~---~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 149 (357)
....|+|.|+ + |+.+...+.|+.+++.++...... ........++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-------------------------------~~~~~P~gia 188 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-------------------------------TNIGQCADVN 188 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-------------------------------CCCSCEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-------------------------------cCCCCccEEE
Confidence 4567888873 3 666655578888888665432221 1234577888
Q ss_pred Eec-CeEEEEecCC-----eEEEEEcCcchhhh-hccccccccEEEEEEec-CCeEEEE-eCCCeEEEEEcccccccccc
Q 038568 150 VKQ-GLMYSVSWDR-----SFKIWNASNYKCLE-SVNKAHEDAVNAVVVSD-NGVVYTG-SADGRIRVWERSVVDHNKER 220 (357)
Q Consensus 150 ~~~-~~l~~~~~dg-----~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~l~~~-~~d~~i~i~d~~~~~~~~~~ 220 (357)
+++ ..|+.+...+ .+...+.. +.... .. .........++++| ++.|..+ ..++.|+.+|.. .+
T Consensus 189 vd~dG~lyVad~~~~~~~~gv~~~~~~-~~~~~~~~-~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~------~g 260 (433)
T 4hw6_A 189 FTLNGDMVVVDDQSSDTNTGIYLFTRA-SGFTERLS-LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA------TG 260 (433)
T ss_dssp ECTTCCEEEEECCSCTTSEEEEEECGG-GTTCCEEE-EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTT------TC
T ss_pred ECCCCCEEEEcCCCCcccceEEEEECC-CCeecccc-ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC------CC
Confidence 888 3355554422 13333322 11110 01 11223456688888 6665544 456788888875 11
Q ss_pred ccceeeeeEeeccccceeEEEEecCCCEEEEE-ecCCeEEEEecc
Q 038568 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERE 264 (357)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~ 264 (357)
... ..+... +....-..++|+|+++.|+.+ ...+.|+.++..
T Consensus 261 ~~~-~~~~~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 261 TLT-EEEVMM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp CEE-EEEEEC-SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred eEE-EEEecc-CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 100 111111 111223469999999855554 457889998865
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.81 E-value=0.011 Score=49.68 Aligned_cols=193 Identities=12% Similarity=-0.033 Sum_probs=106.7
Q ss_pred cccEEEEEEec--CeEEEE-ecCCeEEEEEcCcch---hhhhccccccccEEEEEEec-CCe-EEEEeCCCeEEEEEccc
Q 038568 142 WDAVSDLVVKQ--GLMYSV-SWDRSFKIWNASNYK---CLESVNKAHEDAVNAVVVSD-NGV-VYTGSADGRIRVWERSV 213 (357)
Q Consensus 142 ~~~v~~~~~~~--~~l~~~-~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~d~~i~i~d~~~ 213 (357)
...+..++|++ +.|+.+ ...+.|..+++.... ....+..........+++.+ .+. +++-...+.|.+.++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~- 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK- 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT-
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC-
Confidence 35678899987 555544 456789888886522 11222122345677888887 444 4555567889888876
Q ss_pred cccccccccceeeeeEeeccccceeEEEEecCCCEEEEEec--CCeEEEEecccCCceeeeeeccCCccceEEEeecC--
Q 038568 214 VDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC--DRWIVVWERERDHRMVFAEALWGHTGALLCLINVG-- 289 (357)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-- 289 (357)
. ......+.........|+++|.+..|+.... .+.|...+++......... ..-.....+++++
T Consensus 190 -----g----~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~---~~l~~P~glavd~~~ 257 (400)
T 3p5b_L 190 -----G----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITLDLLS 257 (400)
T ss_dssp -----T----CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC---SSCSCEEEEEEETTT
T ss_pred -----C----CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE---CCCCceEEEEEEeCC
Confidence 1 1111122223345789999997666665543 4678888887544322221 1223446666663
Q ss_pred c-eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 290 D-LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 290 ~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
. +.++-...+.|..+|+.... .+.+......-....+|+...+ . ++++-...+.|..+
T Consensus 258 ~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~~~-~-------lywtd~~~~~V~~~ 316 (400)
T 3p5b_L 258 GRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-K-------VFWTDIINEAIFSA 316 (400)
T ss_dssp TEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEETT-E-------EEEEESSSCSEEEE
T ss_pred CEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEeCC-E-------EEEecCCCCeEEEE
Confidence 3 44444567889999987542 2222222222234456666332 2 55555555555543
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.78 E-value=0.006 Score=51.86 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=88.3
Q ss_pred cEEEEEEec----CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCC-----eEEEEEcccc
Q 038568 144 AVSDLVVKQ----GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADG-----RIRVWERSVV 214 (357)
Q Consensus 144 ~v~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~ 214 (357)
....+++.+ ..|+.+...+.|+.+|..+++..... ........+++++++.|+.+...+ .+..++..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~--~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-- 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT--TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-- 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC--CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG--
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee--cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC--
Confidence 456788885 56666665588999998776554333 344568899999998755555422 23333322
Q ss_pred ccccccccceeeeeEeeccccceeEEEEec-CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecC--c-
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNG-DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D- 290 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~- 290 (357)
...... ..+. .......++++| ++.++++-..++.|+.+|..++.....+..... ...-..+++++ +
T Consensus 216 ----~~~~~~---~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~-~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 216 ----SGFTER---LSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT-KGSNFHIVWHPTGDW 286 (433)
T ss_dssp ----GTTCCE---EEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC-CSSCEEEEECTTSSE
T ss_pred ----CCeecc---cccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC-CCCcccEEEeCCCCE
Confidence 000000 1111 234457789999 666666666788999999986653112211111 12223456655 4
Q ss_pred eEEEecCCCeEEEeeCC
Q 038568 291 LLASGSADRTVRIWQRG 307 (357)
Q Consensus 291 ~l~~~~~dg~i~vw~~~ 307 (357)
++++-...+.|+.++..
T Consensus 287 LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEETTTTEEEEEEBC
T ss_pred EEEEeCCCCEEEEEeCC
Confidence 45555667899998865
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.74 E-value=0.011 Score=47.51 Aligned_cols=204 Identities=12% Similarity=0.101 Sum_probs=116.2
Q ss_pred CceEEEEEecCc--eEEee-cCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEE
Q 038568 73 GSVKSITFHITK--IFTAH-QDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV 149 (357)
Q Consensus 73 ~~v~~l~~~~~~--l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 149 (357)
..-.+++|.+.. |+.++ ..++|..|+...+..... .++..... -.....+..+.
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~--~~~~~s~~---------------------g~~~~~~sGl~ 69 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV--VIDGASSN---------------------GDGEQQMSGLS 69 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE--CCTTTCCS---------------------SCCSEEEEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE--ecCCcccc---------------------CCCcceeeEEE
Confidence 344578998743 55555 689999999875533222 22210000 01112347888
Q ss_pred E---ec-CeEEEEec--------------CCeEEEEEcC---cchhhhhccc-----c-------ccccEEEEEEecCCe
Q 038568 150 V---KQ-GLMYSVSW--------------DRSFKIWNAS---NYKCLESVNK-----A-------HEDAVNAVVVSDNGV 196 (357)
Q Consensus 150 ~---~~-~~l~~~~~--------------dg~i~iwd~~---~~~~~~~~~~-----~-------~~~~v~~~~~~~~~~ 196 (357)
+ .+ +.|+.... +..|..+|+. +++.+..... . .......++..++|.
T Consensus 70 ~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn 149 (334)
T 2p9w_A 70 LLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN 149 (334)
T ss_dssp ESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC
T ss_pred EeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC
Confidence 8 45 44443322 6789999998 7776544310 1 123588999999995
Q ss_pred -EEEEeCC-CeEEEEEccccccccccccceeeee-Ee--eccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceee
Q 038568 197 -VYTGSAD-GRIRVWERSVVDHNKERKSRHMLVT-TL--VKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF 271 (357)
Q Consensus 197 -l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 271 (357)
.++++.. +.|..++.. .. ...... .. .......+.|+++|+++.|++...+|.|..+|+...... .
T Consensus 150 aYVt~s~~~~~I~rV~pd------G~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~ 220 (334)
T 2p9w_A 150 SYVAFALGMPAIARVSAD------GK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-P 220 (334)
T ss_dssp EEEEEEESSCEEEEECTT------SC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-C
T ss_pred EEEeCCCCCCeEEEEeCC------CC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-e
Confidence 5667777 777766654 10 011110 01 111233679999999998888877999999999854321 1
Q ss_pred eee-------ccCCccceEEEeecCce-EEEecCCCeEEEeeCCC
Q 038568 272 AEA-------LWGHTGALLCLINVGDL-LASGSADRTVRIWQRGK 308 (357)
Q Consensus 272 ~~~-------~~~~~~~v~~~~~~~~~-l~~~~~dg~i~vw~~~~ 308 (357)
+.. .......+......++. +++....+.+.+.+...
T Consensus 221 v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 221 EPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 111 01112223344556664 66666677666666554
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.72 E-value=0.023 Score=50.75 Aligned_cols=223 Identities=13% Similarity=0.076 Sum_probs=130.1
Q ss_pred ceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc---eEEeecCCeEEEEecCCccceeeeeecCcccc
Q 038568 40 SLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQHQLVSTLPTVKD 116 (357)
Q Consensus 40 ~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 116 (357)
.+|+.+....|+..++ ++......+.. ..-..+..|+|.+.. +++-..++.|..++++.......+.
T Consensus 7 ~~Ll~s~~~~I~~i~l-~~~~~~~~~~~--~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~------- 76 (628)
T 4a0p_A 7 AFLLFSRRADIRRISL-ETNNNNVAIPL--TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE------- 76 (628)
T ss_dssp CEEEEEETTEEEEEES-SCTTCEEECCC--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------
T ss_pred cEEEEEeCCcEEEEEC-CCCCcceEEEc--CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe-------
Confidence 3455554448899998 65443332221 123467899999853 4455567889888887543222211
Q ss_pred ceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEec
Q 038568 117 RLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD 193 (357)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (357)
........+++.. ++.++-...+.|.+.++.... ...+....-.....|++.|
T Consensus 77 -----------------------~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp 132 (628)
T 4a0p_A 77 -----------------------FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDP 132 (628)
T ss_dssp -----------------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEET
T ss_pred -----------------------CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEcc
Confidence 1112345666665 444555557889999986433 2222123345578999998
Q ss_pred -CCeEEEEe--CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe-cCCeEEEEecccCCce
Q 038568 194 -NGVVYTGS--ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERDHRM 269 (357)
Q Consensus 194 -~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~ 269 (357)
+|.|+... ..+.|...++. . .....+...-.....|+++++++.|+.+. ..+.|..+|+.....
T Consensus 133 ~~G~lY~tD~g~~~~I~r~~~d------G-----~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~- 200 (628)
T 4a0p_A 133 AEGFMYWTEWGGKPKIDRAAMD------G-----SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR- 200 (628)
T ss_dssp TTTEEEEEECSSSCEEEEEETT------S-----CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCCeEEEeCCCCCCEEEEEeCC------C-----CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-
Confidence 45655544 25677777765 1 11112222345678999999766666554 567899999976443
Q ss_pred eeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcc
Q 038568 270 VFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENC 311 (357)
Q Consensus 270 ~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~ 311 (357)
..+... ......++..++ .+++-...+.|...|..+++.
T Consensus 201 ~v~~~~---l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 201 EVIADD---LPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEEEEC---CSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEeecc---CCCceEEEEECCEEEEecCCCCEEEEEECCCCCc
Confidence 222221 222345565556 445555678899998776643
No 292
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.70 E-value=0.0068 Score=55.61 Aligned_cols=194 Identities=8% Similarity=0.045 Sum_probs=100.7
Q ss_pred ceEEEEEe-cCc--eEEe-ecC----CeEEEEecCCc-cceeeeeecCccccceeeeecCCCeEEEeccccccccccccc
Q 038568 74 SVKSITFH-ITK--IFTA-HQD----CKIRVWKITAS-RQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDA 144 (357)
Q Consensus 74 ~v~~l~~~-~~~--l~~~-~~d----~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (357)
.+...+|+ ||+ |+-+ ..+ .+|+++|+.++ +.... .+ ...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~------------------------------~~~ 222 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV------------------------------SGT 222 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE------------------------------EEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc------------------------------cCc
Confidence 67889999 997 4422 222 35999999887 52110 00 011
Q ss_pred EEEEEEec--CeEEEEecC-----CeEEEEEcCcchhh--hhccccccccEEEEEEecCCe-EEEEe---CCCeEEEEEc
Q 038568 145 VSDLVVKQ--GLMYSVSWD-----RSFKIWNASNYKCL--ESVNKAHEDAVNAVVVSDNGV-VYTGS---ADGRIRVWER 211 (357)
Q Consensus 145 v~~~~~~~--~~l~~~~~d-----g~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~-l~~~~---~d~~i~i~d~ 211 (357)
...+.|+| +.|+....+ ..|..+++.+++.. ..+..........+.|+||+. |+... ....|.++|+
T Consensus 223 ~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 223 NGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp CSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred eeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 34567887 456555554 35888888776532 222112234466889999993 44333 2346777887
Q ss_pred cccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC----CeEEEEecccCCceee-eeeccCCccceEEEe
Q 038568 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD----RWIVVWERERDHRMVF-AEALWGHTGALLCLI 286 (357)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~vwd~~~~~~~~~-~~~~~~~~~~v~~~~ 286 (357)
.. ...................++.|+.++.+++....+ ..|..+|+.+...... +.. ......+..+.
T Consensus 303 ~~------~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~-~~~~~~l~~~~ 375 (751)
T 2xe4_A 303 RK------GNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVD-HSEDVFMESIA 375 (751)
T ss_dssp SS------CTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEEC-CCSSEEEEEEE
T ss_pred CC------CCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEEC-CCCCcEEEEEE
Confidence 62 110110011112233445555555444444444433 3677777764221111 111 11122456667
Q ss_pred ecCc-eEEEecCCCeEE--EeeC
Q 038568 287 NVGD-LLASGSADRTVR--IWQR 306 (357)
Q Consensus 287 ~~~~-~l~~~~~dg~i~--vw~~ 306 (357)
+.++ ++++...++..+ ++++
T Consensus 376 ~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 376 VRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp ECSSEEEEEEEETTEEEEEEEEC
T ss_pred EECCEEEEEEEeCCEEEEEEEec
Confidence 7666 566667777554 4554
No 293
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.69 E-value=0.031 Score=51.37 Aligned_cols=256 Identities=12% Similarity=0.175 Sum_probs=143.7
Q ss_pred ccceeEEEEe-cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCcccee
Q 038568 29 HMIISCLAVH-NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQ 106 (357)
Q Consensus 29 ~~~i~~~~~s-~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~ 106 (357)
...|.+|.-+ ..+|..|..+-+..||- ...+....... .....|.++.-..++ |..++.+| +..||..+.+...
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~GL~ryDG-~~~~~~~~~~~--~~~~~i~~i~~d~~g~lWigT~~G-l~~yd~~~~~f~~ 96 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKGLFSYDG-YSTQQHFTYGE--NNNTRIYCGVIIDNTYLYMGTDNG-ILVYNYRADRYEQ 96 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSCEEEECS-SCEEECSCTTS--TTSSCEEEEEEETTTEEEEEETTE-EEEEETTTTEECC
T ss_pred cceEEEEEECCCCCEEEEECCCccccCC-CceEEEEccCC--CCCceEEEEEEcCCCcEEEEeCCC-eEEEeCCCCEEEC
Confidence 4679999988 66777777666667775 33221111111 134578888877776 77777655 7889987653211
Q ss_pred eeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhh--c-ccccc
Q 038568 107 LVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLES--V-NKAHE 183 (357)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~-~~~~~ 183 (357)
... .....|.++......|..++.+ -|..+|..+++.... . .....
T Consensus 97 ---~~~---------------------------~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~ 145 (758)
T 3ott_A 97 ---PET---------------------------DFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPN 145 (758)
T ss_dssp ---CSC---------------------------CCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSC
T ss_pred ---ccc---------------------------CCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCC
Confidence 000 1123466665444667777766 588888765442211 0 01123
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeec----cccceeEEEEecCCCEEEEEecCCeEE
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK----HRSTVNALALNGDGSLLFSGGCDRWIV 259 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~ 259 (357)
..|.++....++.|..+..+ -+..++... .. .... .... ....|.++...+++..|..|+.. -+.
T Consensus 146 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~------~~--~~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~ 214 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYN-GLCRYIPSN------GK--FEGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLF 214 (758)
T ss_dssp SCEEEEEECTTCCEEEEETT-EEEEEETTT------TE--EEEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEE
T ss_pred CeEEEEEEcCCCCEEEEeCC-CHhhCccCC------Cc--eEEe-cCCCccccccceeEEEEEECCCCEEEEEECC-CCe
Confidence 56888888888877777654 577787651 11 1110 0110 12347888888777766666654 588
Q ss_pred EEecccCCceeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeee-----cCCcCceEEEEEeeC
Q 038568 260 VWERERDHRMVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFL-----EGHEKPVKSLVAISS 333 (357)
Q Consensus 260 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~ 333 (357)
.+|..+.+.. ....+ ....|.++..+.+ .|..|+.+ -+.+++..+++ .+..... .-....|.++....+
T Consensus 215 ~~~~~~~~~~-~~~~l--~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~ 289 (758)
T 3ott_A 215 QYFPSTGQIK-QTEAF--HNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTP-LQHIIHDSRNIQSLTNNIIWNIFADQE 289 (758)
T ss_dssp EEETTTTEEE-EEEEE--EEEEEEEEEECTTCCEEEEETT-EEEEECCTTSC-CEEECCCTTCTTSCSCSCEEEEEECTT
T ss_pred EEcCCCCeEE-eccCC--CCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCc-EEEEEcCCCCcCcCCcCeEEEEEEcCC
Confidence 8887755321 22222 1345777776655 55555544 47888877642 1111110 012345888877666
Q ss_pred CC
Q 038568 334 SS 335 (357)
Q Consensus 334 ~~ 335 (357)
+.
T Consensus 290 g~ 291 (758)
T 3ott_A 290 HN 291 (758)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.60 E-value=0.00052 Score=62.21 Aligned_cols=190 Identities=12% Similarity=-0.052 Sum_probs=99.3
Q ss_pred cEEEEEEec--CeEEEE-ecCCeEEEEEcCc----chhhhhccccccccEEEEEEecC-Ce-EEEEeCCCeEEEEEcccc
Q 038568 144 AVSDLVVKQ--GLMYSV-SWDRSFKIWNASN----YKCLESVNKAHEDAVNAVVVSDN-GV-VYTGSADGRIRVWERSVV 214 (357)
Q Consensus 144 ~v~~~~~~~--~~l~~~-~~dg~i~iwd~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~-l~~~~~d~~i~i~d~~~~ 214 (357)
.+..++|.+ +.|+.+ ...+.|+.+++.. ......+ .........|++.+. +. +++-...+.|.++++.
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i-~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d-- 483 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-- 483 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC-CSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS--
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE-eCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC--
Confidence 455778876 555554 3457899998875 1222222 112223456777743 44 4444567889888875
Q ss_pred ccccccccceeeeeEeeccccceeEEEEecCCCEEEEEec--CCeEEEEecccCCceeeeeeccCCccceEEEeecC--c
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC--DRWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D 290 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~ 290 (357)
. ......+.........++++|.+.+|+.+.. .+.|.++++.......... ..-.....+++++ .
T Consensus 484 ----g----~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~---~~l~~PnGlavd~~~~ 552 (699)
T 1n7d_A 484 ----G----VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITLDLLSG 552 (699)
T ss_dssp ----S----CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESC---SSCSSCCCEEECTTTC
T ss_pred ----C----CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEe---CCCCCccEEEEeccCC
Confidence 1 1111111222244678899996655555443 2678888876433211111 1112234566654 3
Q ss_pred -eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 291 -LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 291 -~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
++++-...+.|..+++.... .+.+...........+|++..+ . ++++....+.|..+
T Consensus 553 ~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~-------lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 553 RLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-K-------VFWTDIINEAIFSA 610 (699)
T ss_dssp CEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-E-------EEEECSTTTCEEEE
T ss_pred EEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-E-------EEEEeCCCCeEEEE
Confidence 55555667889999987532 2222221111223345555443 2 55666666666654
No 295
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.58 E-value=0.02 Score=46.06 Aligned_cols=233 Identities=9% Similarity=0.114 Sum_probs=112.3
Q ss_pred cceEEEeeC--C-ceEEEeccCCcc--ccceeccccCCCCceEEEEEecCc-eEEeecC----CeEEEEecCCccceeee
Q 038568 39 NSLLYAASL--N-EINVFDLISDYS--HVDTFSNDLSSSGSVKSITFHITK-IFTAHQD----CKIRVWKITASRQHQLV 108 (357)
Q Consensus 39 ~~~l~t~~~--d-~i~iw~~~~~~~--~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d----~~i~vwd~~~~~~~~~~ 108 (357)
+.+++.|+. . .+.+||. .+.+ .+..+.. .... .+++...+. ++.|+.+ ..+.+||+.+.+... +
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~-~~~~W~~~~~~p~---~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~-~ 85 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNP-KDYSWTDIRCPFE---KRRD-AACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYS-K 85 (306)
T ss_dssp CEEEEEECCSSTTSEEEEET-TTTEEEECCCCSC---CCBS-CEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEE-E
T ss_pred ceEEEEeCCCCCceEEEecC-CCCCEecCCCCCc---ccce-eEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEE-C
Confidence 345555553 3 8888998 5532 2222221 1122 233333444 6666654 567788887765432 2
Q ss_pred eecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecC------CeEEEEEcCcchh--hhhccc
Q 038568 109 STLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWD------RSFKIWNASNYKC--LESVNK 180 (357)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~--~~~~~~ 180 (357)
...+. . ......+.+...+++.|+.+ ..+.+||..+.+- +..+
T Consensus 86 ~~~p~--------------------------~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~-- 136 (306)
T 3ii7_A 86 LGPPT--------------------------P-RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM-- 136 (306)
T ss_dssp ECCSS--------------------------C-CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC--
T ss_pred CCCCc--------------------------c-ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC--
Confidence 22211 0 11112222333566666654 4588889876542 2222
Q ss_pred cccccEEEEEEecCCe-EEEEeC---------CCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEE
Q 038568 181 AHEDAVNAVVVSDNGV-VYTGSA---------DGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLF 250 (357)
Q Consensus 181 ~~~~~v~~~~~~~~~~-l~~~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 250 (357)
.....-.+++.. ++. ++.|+. -..+.+||+.. .....+..+......- ++... ++++++
T Consensus 137 p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~--------~~W~~~~~~p~~r~~~-~~~~~-~~~i~v 205 (306)
T 3ii7_A 137 LTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPAT--------ETWTELCPMIEARKNH-GLVFV-KDKIFA 205 (306)
T ss_dssp SSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTT--------TEEEEECCCSSCCBSC-EEEEE-TTEEEE
T ss_pred cCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCC--------CeEEECCCccchhhcc-eEEEE-CCEEEE
Confidence 111111122222 444 555543 34578888762 1222222222111111 22222 566777
Q ss_pred EEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCC-----CeEEEeeCCCCcceeeeeeec
Q 038568 251 SGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSAD-----RTVRIWQRGKENCYRCMAFLE 319 (357)
Q Consensus 251 ~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~ 319 (357)
.|+.+ ..+.+||+.+.+ ...+..+........++...+.+++.|+.+ ..+.+||..+.+ +..+..+.
T Consensus 206 ~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~ 282 (306)
T 3ii7_A 206 VGGQNGLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK-WVANSKVR 282 (306)
T ss_dssp ECCEETTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTE-EEEEEEEE
T ss_pred EeCCCCCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe-EEeCCCcc
Confidence 77653 358899988653 222222222222334455566677777754 568899998763 44444443
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.56 E-value=0.024 Score=46.66 Aligned_cols=230 Identities=11% Similarity=0.014 Sum_probs=114.2
Q ss_pred CceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe
Q 038568 73 GSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151 (357)
Q Consensus 73 ~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 151 (357)
.....|+|.|++ |+.+..+|.|++++. .++ ..+..++ ++.........++++
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~--~~~~~~~------------------------v~~~g~~g~~gia~~ 81 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGK--KLVASFD------------------------VANVGEAGLLGLALH 81 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCE--EEEEECC------------------------CCCSTTCSEEEEEEC
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc--eEeeccc------------------------eeecCCCceeeEEeC
Confidence 456789999987 777888899999873 333 2222211 000122456778888
Q ss_pred cC-----eEEEEec----C----CeEEEEEcCcc-------hhh-hhccccccccEEEEEEecCCeEEEEeCC-------
Q 038568 152 QG-----LMYSVSW----D----RSFKIWNASNY-------KCL-ESVNKAHEDAVNAVVVSDNGVVYTGSAD------- 203 (357)
Q Consensus 152 ~~-----~l~~~~~----d----g~i~iwd~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~l~~~~~d------- 203 (357)
|+ .|+.+.. + +.|..|+.... +.+ ..+..........|+|.|+|.|..+..+
T Consensus 82 pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~ 161 (354)
T 3a9g_A 82 PEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLA 161 (354)
T ss_dssp TTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGG
T ss_pred CCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccc
Confidence 73 5554443 2 56777776543 111 1121111123467899999965444322
Q ss_pred -------CeEEEEEccccccccccccceeeeeEeeccccceeEEEEec-CCCEEEEEecCC---eEEEEecccCCc----
Q 038568 204 -------GRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG-DGSLLFSGGCDR---WIVVWERERDHR---- 268 (357)
Q Consensus 204 -------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~vwd~~~~~~---- 268 (357)
|.|..++... .......-........++. ....++|+| +++++++-...+ .|.+... +..
T Consensus 162 ~d~~~~~G~I~ri~~dG--~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~--G~nyGwp 236 (354)
T 3a9g_A 162 QDLSSLAGKILRVDEEG--RPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILK--GGNYGWP 236 (354)
T ss_dssp TCTTCCSSEEEEECTTS--CCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECT--TCBCCTT
T ss_pred cCCCCCCeEEEEEcCCC--CCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecC--CCcCCCC
Confidence 4555555430 0000000000011122333 346899999 565444432221 2443321 110
Q ss_pred -----------eeeeeec-cCCccceEEEee---------cCceEEEecCCCeEEEeeCCCCccee-eeeeecCCcCceE
Q 038568 269 -----------MVFAEAL-WGHTGALLCLIN---------VGDLLASGSADRTVRIWQRGKENCYR-CMAFLEGHEKPVK 326 (357)
Q Consensus 269 -----------~~~~~~~-~~~~~~v~~~~~---------~~~~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~h~~~v~ 326 (357)
......+ ..| .....+.+ .+.++++.-..+.|...++....... ....+.+-...+.
T Consensus 237 ~~~g~~~~~~~~~p~~~~~~~~-~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~ 315 (354)
T 3a9g_A 237 LATGKAGRGEFVDPVIDTGSET-WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLR 315 (354)
T ss_dssp TCCSCCCCTTSCCCSEECTTCC-CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEE
T ss_pred cccCCCCCCCCcCCEeecCCCC-cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCee
Confidence 0111122 122 23444444 34466766677888888887532111 1122333345789
Q ss_pred EEEEeeCCC
Q 038568 327 SLVAISSSS 335 (357)
Q Consensus 327 ~~~~~~~~~ 335 (357)
.+++.||+.
T Consensus 316 ~v~~~pDG~ 324 (354)
T 3a9g_A 316 DVVIDDDGG 324 (354)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCc
Confidence 999999987
No 297
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.53 E-value=0.0073 Score=50.11 Aligned_cols=143 Identities=15% Similarity=0.082 Sum_probs=87.9
Q ss_pred CCeEEEEEcCcchhhhhcccc---ccccEEEEEEecCCeEEEEeCCCeEEEEEcccccccccc-c--cceeeeeEeec--
Q 038568 161 DRSFKIWNASNYKCLESVNKA---HEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKER-K--SRHMLVTTLVK-- 232 (357)
Q Consensus 161 dg~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~--~~~~~~~~~~~-- 232 (357)
++.||.-++......+.+... .-..+..+..+|+|.+++-..+..|.+..+......... . ...+ ...+.-
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q-~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQ-IFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTE-EEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccc-eeEEEcCC
Confidence 467888787644333333122 122577899999997666677789999998732211110 0 0111 122221
Q ss_pred ----cccceeEEEEec---CCCEEEEEecCCeEEEEecccCCc-eeeee------eccCCccceEEEeecCc----eEEE
Q 038568 233 ----HRSTVNALALNG---DGSLLFSGGCDRWIVVWERERDHR-MVFAE------ALWGHTGALLCLINVGD----LLAS 294 (357)
Q Consensus 233 ----~~~~v~~~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~------~~~~~~~~v~~~~~~~~----~l~~ 294 (357)
...+|..+.|+| .+..|++-..|+.|++||+..... +..+. ........+.+++|.++ |+++
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLN 198 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEE
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEe
Confidence 257799999999 456899999999999999985321 11111 11122356778888776 5566
Q ss_pred ecCCCeEEEe
Q 038568 295 GSADRTVRIW 304 (357)
Q Consensus 295 ~~~dg~i~vw 304 (357)
...+|.|+-.
T Consensus 199 ~t~~GDIYAl 208 (452)
T 3pbp_A 199 TTEGGDIFAF 208 (452)
T ss_dssp CTTSCEEEEE
T ss_pred cCCCCCEEEE
Confidence 6788887654
No 298
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.52 E-value=0.033 Score=47.24 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=84.1
Q ss_pred eeEEEEe---cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc--eEEeecC-C----eEEEEecC
Q 038568 32 ISCLAVH---NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK--IFTAHQD-C----KIRVWKIT 100 (357)
Q Consensus 32 i~~~~~s---~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--l~~~~~d-~----~i~vwd~~ 100 (357)
...|+++ +..|+++... .|+.+|+ +... +..+.. .......|+|++++ |+.+... + .+.+.+.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~-~~~~-v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDF-EKEY-VSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEET-TTTE-EEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEEC-CCCE-EEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 4567776 3667777776 8899998 6544 333333 45668899999876 5555431 1 2333332
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEE-EEecCCeEEEEEcCcchhhhh
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMY-SVSWDRSFKIWNASNYKCLES 177 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~-~~~~dg~i~iwd~~~~~~~~~ 177 (357)
.+..... ..+ ........++++| ..|+ +-..++.|..++...+.....
T Consensus 213 ~g~~~~~-~~l----------------------------~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 213 ESGFKVI-TEL----------------------------TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GGTSCSE-EEE----------------------------EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceeee-eee----------------------------ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 2221100 000 0112345667777 3444 444678899999876543222
Q ss_pred ccccccccEEEEEEecCCe-E-EEEeCCCeEEEEEcc
Q 038568 178 VNKAHEDAVNAVVVSDNGV-V-YTGSADGRIRVWERS 212 (357)
Q Consensus 178 ~~~~~~~~v~~~~~~~~~~-l-~~~~~d~~i~i~d~~ 212 (357)
...........++++|++. | ++-...+.|..++..
T Consensus 264 ~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 264 FTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 2112234567899999994 4 444567889998865
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.51 E-value=0.056 Score=49.63 Aligned_cols=154 Identities=12% Similarity=-0.033 Sum_probs=88.5
Q ss_pred ccEEEEEEec--CeEE-EEecCCeEEEEEcCcchh---hhhccccccccEEEEEEecCC-e-EEEEeCCCeEEEEEcccc
Q 038568 143 DAVSDLVVKQ--GLMY-SVSWDRSFKIWNASNYKC---LESVNKAHEDAVNAVVVSDNG-V-VYTGSADGRIRVWERSVV 214 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~-~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~d~~i~i~d~~~~ 214 (357)
..+..++|.+ +.|+ +-...+.|+.+++..... ...+..........|++.+.+ . +++-...+.|.+.++.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld-- 501 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK-- 501 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT--
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC--
Confidence 4567888887 4444 445567888888864311 111212233456678888765 4 5555667899999886
Q ss_pred ccccccccceeeeeEeeccccceeEEEEecCCCEEEEEec--CCeEEEEecccCCceeeeeeccCCccceEEEeec--Cc
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC--DRWIVVWERERDHRMVFAEALWGHTGALLCLINV--GD 290 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~ 290 (357)
. ......+.........|+++|.+.+|+.... .+.|.+.++........+. ..-.....++++ ..
T Consensus 502 ----G----~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~---~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 502 ----G----VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITLDLLSG 570 (791)
T ss_dssp ----S----SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC---SSCSCEEEEEEETTTT
T ss_pred ----C----CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe---CCCCCceEEEEecCCC
Confidence 1 1111112223345789999997666665543 3679888887544322221 122345566665 33
Q ss_pred -eEEEecCCCeEEEeeCCCC
Q 038568 291 -LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 291 -~l~~~~~dg~i~vw~~~~~ 309 (357)
++++-...+.|...++...
T Consensus 571 ~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 571 RLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp EEEEEETTTTEEEEEETTSC
T ss_pred eEEEEeCCCCcEEEEecCCC
Confidence 4444455678999998654
No 300
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.50 E-value=0.078 Score=50.96 Aligned_cols=240 Identities=10% Similarity=0.063 Sum_probs=122.1
Q ss_pred ceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeE
Q 038568 49 EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYV 128 (357)
Q Consensus 49 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (357)
.|++.+. +....+..+.. +....|...+.+...++.++ .+.+.+++++.++.. .....
T Consensus 493 ~Irli~~-~~~~~~~~w~~--p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~-~~~~~----------------- 550 (1158)
T 3ei3_A 493 SVRLVSQ-EPKALVSEWKE--PQAKNISVASCNSSQVVVAV-GRALYYLQIHPQELR-QISHT----------------- 550 (1158)
T ss_dssp CEEEEES-SSCCEEEEECC--TTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTEEE-EEEEE-----------------
T ss_pred EEEEEEC-CCCeEEEEEEC--CCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCcee-eeccc-----------------
Confidence 4555555 43334444442 13345777676666655554 567777777654221 11110
Q ss_pred EEecccccccccccccEEEEEEec--------CeEEEEec-CCeEEEEEcCcchhhhhccccccccEEEEEEec-CC--e
Q 038568 129 TVRRHKKRLWLEHWDAVSDLVVKQ--------GLMYSVSW-DRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD-NG--V 196 (357)
Q Consensus 129 ~~~~~~~~~~~~~~~~v~~~~~~~--------~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~ 196 (357)
.-...|.|+++.+ .+++.|.. |++++|+++.+.+.+............++.+.. ++ +
T Consensus 551 -----------~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~ 619 (1158)
T 3ei3_A 551 -----------EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHY 619 (1158)
T ss_dssp -----------ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEE
T ss_pred -----------CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcE
Confidence 2245788888875 58888886 999999999875554433112223444444432 23 5
Q ss_pred EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeecc
Q 038568 197 VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW 276 (357)
Q Consensus 197 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 276 (357)
|.+|-.||.+..+.+... ++..... .....+ ..++.-..+...+..-+.+..+.-..+|.-+ ++ + ....+.
T Consensus 620 L~igl~dG~l~~~~~d~~----tg~l~d~-r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~-l-~~s~l~ 690 (1158)
T 3ei3_A 620 LLCALGDGALFYFGLNIE----TGLLSDR-KKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HK-L-VFSNVN 690 (1158)
T ss_dssp EEEEETTSEEEEEEECTT----TCCEEEE-EEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SS-E-EEEEBS
T ss_pred EEEEeCCCeEEEEEEcCC----CCccccc-eeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-Cc-e-EEeccC
Confidence 889999999887776521 1111111 111222 3344433444344332223334444444433 22 1 111211
Q ss_pred CCccceE-EEeec----CceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCC
Q 038568 277 GHTGALL-CLINV----GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 277 ~~~~~v~-~~~~~----~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
. ..+. ...|+ ++-++..+ ++.++|..+.+-+.+. +..+.- ...+..++++|..+
T Consensus 691 ~--~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~-~~~ipL-~~Tprri~y~~~~~ 749 (1158)
T 3ei3_A 691 L--KEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLH-IRTVPL-YESPRKICYQEVSQ 749 (1158)
T ss_dssp S--SCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEE-EEEEEC-SSEEEEEEEEGGGT
T ss_pred h--HHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCee-EEEEeC-CCCceEEEEcCCCC
Confidence 1 1222 22332 34455444 4459999886543222 333332 35788999999876
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.46 E-value=0.029 Score=45.11 Aligned_cols=176 Identities=9% Similarity=0.098 Sum_probs=85.2
Q ss_pred ecCeEEEEecC----CeEEEEEcCcchh--hhhccccccccEEEEEEecCC-eEEEEeCC------CeEEEEEccccccc
Q 038568 151 KQGLMYSVSWD----RSFKIWNASNYKC--LESVNKAHEDAVNAVVVSDNG-VVYTGSAD------GRIRVWERSVVDHN 217 (357)
Q Consensus 151 ~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~ 217 (357)
...+++.|+.+ ..+.+||+.+.+- +..+ .....-.+++.. ++ .++.|+.+ ..+.+||+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~---- 127 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP--PTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRT---- 127 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC--SSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTT----
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC--CccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCC----
Confidence 33566666654 5688888876542 2222 111111122222 44 45666654 4588888762
Q ss_pred cccccceeeeeEeeccccceeEEEEecCCCEEEEEec---------CCeEEEEecccCCceeeeeeccCCccceEEEeec
Q 038568 218 KERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC---------DRWIVVWERERDHRMVFAEALWGHTGALLCLINV 288 (357)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 288 (357)
.....+..+......-..+. -++++++.|+. -..+.+||+.+.+ ...+..+........++...
T Consensus 128 ----~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~ 200 (306)
T 3ii7_A 128 ----ESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-WTELCPMIEARKNHGLVFVK 200 (306)
T ss_dssp ----TEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTE-EEEECCCSSCCBSCEEEEET
T ss_pred ----CceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCe-EEECCCccchhhcceEEEEC
Confidence 11222222221111111222 25666676654 3458899988663 22222222222223344455
Q ss_pred CceEEEecCC-----CeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCC
Q 038568 289 GDLLASGSAD-----RTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLN 350 (357)
Q Consensus 289 ~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~d 350 (357)
+.+++.|+.+ ..+.+||+.+.+ +..+..+.........+.+ ++. +++.||.+
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~-------i~v~GG~~ 257 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMPWKGVTVKCAAV--GSI-------VYVLAGFQ 257 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTTTE-EEECCCCSCCBSCCEEEEE--TTE-------EEEEECBC
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCCCCccceeEEEE--CCE-------EEEEeCcC
Confidence 6677777654 468899998763 4444333322222222222 444 77777754
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.40 E-value=0.033 Score=44.52 Aligned_cols=241 Identities=8% Similarity=0.117 Sum_probs=136.2
Q ss_pred cceEEEe---eCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCc
Q 038568 39 NSLLYAA---SLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPT 113 (357)
Q Consensus 39 ~~~l~t~---~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 113 (357)
.+++.+- +.+ .|.|-|+ ..+..+..-.. .-. +.-.+|.. +++--...+++++|+++.+.+....
T Consensus 36 DkyicVrE~~~~~~~VvIiDl-~n~~~~~Rrpi--~Ad----sAIMnP~~~ViALrag~~LQiFnletK~klks~~---- 104 (365)
T 2xzh_A 36 DKFICIREKVGEQAQVVIIDM-NDPSNPIRRPI--SAD----SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT---- 104 (365)
T ss_dssp TTEEEEEEEETTEEEEEEEET-TSTTSCEEEEC--CCS----EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEE----
T ss_pred CceEEEEecCCCCCEEEEEEC-CCCCCcccccc--ccc----eeeeCCCccEEEEecCCeEEEechHHhhhhccee----
Confidence 4555543 234 8999999 55443322111 011 23346765 3333346889999999886554432
Q ss_pred cccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCc-chhhhhccccc----cccEE
Q 038568 114 VKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASN-YKCLESVNKAH----EDAVN 187 (357)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~----~~~v~ 187 (357)
....|.--.|-. +.|+..+ +..|.-|++.. ..+.+.+ ..| ...|.
T Consensus 105 ---------------------------~~e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvF-dR~~~L~~~QII 155 (365)
T 2xzh_A 105 ---------------------------MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQII 155 (365)
T ss_dssp ---------------------------CSSCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEE-ECCGGGTTCEEE
T ss_pred ---------------------------cCCccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceee-ecchhcccceEE
Confidence 235677777777 6666666 45799999864 2343333 222 34566
Q ss_pred EEEEecCCe--EEEEe------CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecC--C-CEEEEEec--
Q 038568 188 AVVVSDNGV--VYTGS------ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGD--G-SLLFSGGC-- 254 (357)
Q Consensus 188 ~~~~~~~~~--l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~~-- 254 (357)
.-..+++.. +++|- -.|.+.+|..+ ....+.+.+|...-..+.+..+ . .+++.+..
T Consensus 156 nY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-----------r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 156 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-----------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp EEEECTTSCEEEEEEEEEETTEEEEEEEEEETT-----------TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred EEEECCCCCEEEEEeEeccCCccceeEEEEeec-----------ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 666677763 44442 23677888876 2344456666554433333211 1 13333322
Q ss_pred -CCeEEEEecccC---Ccee---eeeecc---CCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCc
Q 038568 255 -DRWIVVWERERD---HRMV---FAEALW---GHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322 (357)
Q Consensus 255 -dg~i~vwd~~~~---~~~~---~~~~~~---~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~ 322 (357)
.+.++|.++... .... ....+. ....--.++..+.+ .+..-..-|.|++||++++ .++..-+-..
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTg---t~i~~nrIS~ 301 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG---TCIYMNRISG 301 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC---CEEEEEECCS
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccC---cEEEEeccCC
Confidence 268999998543 1111 111111 11223345555555 7777788899999999998 6677666667
Q ss_pred CceEEEEEeeC
Q 038568 323 KPVKSLVAISS 333 (357)
Q Consensus 323 ~~v~~~~~~~~ 333 (357)
++|..-+-+..
T Consensus 302 d~iF~ta~~~~ 312 (365)
T 2xzh_A 302 ETIFVTAPHEA 312 (365)
T ss_dssp SCEEEEEEEGG
T ss_pred CceEEecccCC
Confidence 77766555444
No 303
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.39 E-value=0.035 Score=44.44 Aligned_cols=149 Identities=9% Similarity=0.186 Sum_probs=75.8
Q ss_pred CeEEEEecC-----CeEEEEEcCcch-----hhhhccccccccEEEEEEecCCe-EEEEeCC-----CeEEEEEcccccc
Q 038568 153 GLMYSVSWD-----RSFKIWNASNYK-----CLESVNKAHEDAVNAVVVSDNGV-VYTGSAD-----GRIRVWERSVVDH 216 (357)
Q Consensus 153 ~~l~~~~~d-----g~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~d-----~~i~i~d~~~~~~ 216 (357)
.+++.|+.+ ..+.+||+.+.+ .+..+ .....-.+++.. +++ ++.|+.+ ..+.+||+..
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~--p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~--- 137 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM--NVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNI--- 137 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC--SSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTT---
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC--CCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCC---
Confidence 566666654 468899987755 22222 111111122222 454 5556543 3577888761
Q ss_pred ccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCce
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDL 291 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 291 (357)
.....+..+......-..+. .++++++.|+.+ ..+.+||+.+.+- .....+........++...+.+
T Consensus 138 -----~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~~~~i 209 (301)
T 2vpj_A 138 -----DQWSMLGDMQTAREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHW-TNVTPMATKRSGAGVALLNDHI 209 (301)
T ss_dssp -----TEEEEEEECSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEETTEE
T ss_pred -----CeEEECCCCCCCcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcE-EeCCCCCcccccceEEEECCEE
Confidence 12222222221111112222 266777777654 4588999876542 2222222222223444556667
Q ss_pred EEEecCC-----CeEEEeeCCCCcceeeee
Q 038568 292 LASGSAD-----RTVRIWQRGKENCYRCMA 316 (357)
Q Consensus 292 l~~~~~d-----g~i~vw~~~~~~~~~~~~ 316 (357)
++.|+.+ ..+.+||+.+.+ +..+.
T Consensus 210 ~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~ 238 (301)
T 2vpj_A 210 YVVGGFDGTAHLSSVEAYNIRTDS-WTTVT 238 (301)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTE-EEEEC
T ss_pred EEEeCCCCCcccceEEEEeCCCCc-EEECC
Confidence 7777764 468999998763 44343
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.38 E-value=0.07 Score=47.63 Aligned_cols=222 Identities=13% Similarity=0.085 Sum_probs=118.5
Q ss_pred eEEEeeCCceEEEeccCCcc-ccceeccccCCCCceEEEEEecCc--eEEe-ecCCeEEEEecCCccceeeeeecCcccc
Q 038568 41 LLYAASLNEINVFDLISDYS-HVDTFSNDLSSSGSVKSITFHITK--IFTA-HQDCKIRVWKITASRQHQLVSTLPTVKD 116 (357)
Q Consensus 41 ~l~t~~~d~i~iw~~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~--l~~~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~ 116 (357)
+|.-+....|+..++ +... ....+.. .-..+..|+|++.. |+.+ ...+.|..++++.......+..
T Consensus 11 ~~~~~~~~~I~~i~~-~~~~~~~~~~~~---~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~------ 80 (619)
T 3s94_A 11 LLLYANRRDLRLVDA-TNGKENATIVVG---GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------ 80 (619)
T ss_dssp CEEEECSSBEEEECC-C---------CB---CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC------
T ss_pred eEEEeccccEEEEeC-CCCcceEEEEEc---CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe------
Confidence 344444448888888 5432 1222221 44567899999743 4444 4467788888875422111111
Q ss_pred ceeeeecCCCeEEEecccccccccccccEEEEEEec--C-eEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEec
Q 038568 117 RLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--G-LMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSD 193 (357)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 193 (357)
........+++.. + ++++-...+.|.+.++.... ...+....-.....|++.|
T Consensus 81 -----------------------~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp 136 (619)
T 3s94_A 81 -----------------------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDP 136 (619)
T ss_dssp -----------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEET
T ss_pred -----------------------CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEec
Confidence 1123567788876 4 44555567899999986433 2233123344567899988
Q ss_pred C-CeEEEEeC--CCeEEEEEccccccccccccceeeeeEe-eccccceeEEEEecCCCEEEEE-ecCCeEEEEecccCCc
Q 038568 194 N-GVVYTGSA--DGRIRVWERSVVDHNKERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERERDHR 268 (357)
Q Consensus 194 ~-~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~~ 268 (357)
. +.|+.... .+.|...++. +.....+ ...-...+.|++++++..|+.+ ...+.|..+|+.....
T Consensus 137 ~~g~ly~tD~g~~~~I~r~~~d-----------G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~ 205 (619)
T 3s94_A 137 SSGFMYWTDWGEVPKIERAGMD-----------GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 205 (619)
T ss_dssp TTTEEEEEECSSSCEEEEEETT-----------SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE
T ss_pred CCCeEEEeccCCCCEEEEEECC-----------CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc
Confidence 6 55544442 4566666654 1111111 1223457899999976655555 4567899999875433
Q ss_pred eeeeeeccCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc
Q 038568 269 MVFAEALWGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 269 ~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~ 310 (357)
.........|. ..++..++ .+++-...+.|...|..+++
T Consensus 206 ~~~~~~~~~~P---~gi~~~~~~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 206 QAVVKGSLPHP---FALTLFEDILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp C---------C---CCEEESSSEEEEECTTTCSEEEEESSSCC
T ss_pred EEEEeCCCCCc---eEEEEeCCEEEEecCCCCEEEEEECCCCc
Confidence 22221111222 34555566 44555567788888887764
No 305
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.31 E-value=0.057 Score=45.08 Aligned_cols=242 Identities=8% Similarity=0.119 Sum_probs=137.2
Q ss_pred cceEEEe---eCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCc
Q 038568 39 NSLLYAA---SLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPT 113 (357)
Q Consensus 39 ~~~l~t~---~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 113 (357)
.+++.+- +.+ .|.|-|+ .++..+..-.. .--+.-.+|.. +++--...++.|+|+++.+......
T Consensus 35 DkyicVrE~~~~~~~vvIiDl-~~~~~~~rrpi------~AdsAIMnP~~~iiALrag~~lQiFnle~K~klks~~---- 103 (494)
T 1bpo_A 35 DKFICIREKVGEQAQVVIIDM-NDPSNPIRRPI------SADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT---- 103 (494)
T ss_dssp TTEEEEEECCTTCCEEEEEET-TSTTSCEEEEC------CCSEEEECSSSSCEEEEETTEEEEEETTTTEEEEEEE----
T ss_pred CceEEEEecCCCCCeEEEEEC-CCCCcceeccc------ccceeeeCCCCcEEEEecCCeEEEEchHHhhhhccee----
Confidence 5555543 234 8999999 55443322111 11234456655 3333347899999999886554432
Q ss_pred cccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCc-chhhhhccccc----cccEE
Q 038568 114 VKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASN-YKCLESVNKAH----EDAVN 187 (357)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~----~~~v~ 187 (357)
....|.--.|-. +.|+..+ +..|.-|++.. ..+.+.+ ..| ...|.
T Consensus 104 ---------------------------~~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvF-dR~~~L~~~QII 154 (494)
T 1bpo_A 104 ---------------------------MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQII 154 (494)
T ss_dssp ---------------------------CSSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEE-ECCGGGTTCEEE
T ss_pred ---------------------------cCCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhhe-ecchhcccceEE
Confidence 234566666666 6666665 45799999864 2344444 222 35566
Q ss_pred EEEEecCCe--EEEEe------CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCC---CEEEEEec--
Q 038568 188 AVVVSDNGV--VYTGS------ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDG---SLLFSGGC-- 254 (357)
Q Consensus 188 ~~~~~~~~~--l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~-- 254 (357)
.-..+++.. +++|- -.|.+.+|..+ ....+.+.+|...-..+.+..+. ..++.+..
T Consensus 155 nY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e-----------r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 223 (494)
T 1bpo_A 155 NYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD-----------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 223 (494)
T ss_dssp EEEECTTSSEEEEEEEEEETTEEEEEEEEEEST-----------TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECST
T ss_pred EEEECCCCCeEEEEeecccCCcccceEEEeecc-----------ccccchheeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 666777773 44442 24678888876 23345566666554444433211 23333333
Q ss_pred -CCeEEEEecccC---Ccee---eeeecc---CCccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCc
Q 038568 255 -DRWIVVWERERD---HRMV---FAEALW---GHTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHE 322 (357)
Q Consensus 255 -dg~i~vwd~~~~---~~~~---~~~~~~---~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~ 322 (357)
.+.++|.++... .... ....+. .-...-.++..+++ .+..-..-|.|++||++++ .++..-+-..
T Consensus 224 ~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTg---t~i~~nrIs~ 300 (494)
T 1bpo_A 224 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG---TCIYMNRISG 300 (494)
T ss_dssp TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC---CEEEEEECCS
T ss_pred CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccc---eeeeeecccC
Confidence 378999998643 1110 111111 11223345555555 7777888999999999998 6666666666
Q ss_pred CceEEEEEeeCC
Q 038568 323 KPVKSLVAISSS 334 (357)
Q Consensus 323 ~~v~~~~~~~~~ 334 (357)
++|..-+-....
T Consensus 301 ~~iF~t~~~~~~ 312 (494)
T 1bpo_A 301 ETIFVTAPHEAT 312 (494)
T ss_dssp SCEEEEEEETTT
T ss_pred CceEEecccCCC
Confidence 777665554443
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.28 E-value=0.047 Score=43.72 Aligned_cols=150 Identities=14% Similarity=0.235 Sum_probs=73.1
Q ss_pred CeEEEEecC-----CeEEEEEcCcch--hhhhccccccccEEEEEEecCCeEEEEeCCC-----eEEEEEcccccccccc
Q 038568 153 GLMYSVSWD-----RSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDNGVVYTGSADG-----RIRVWERSVVDHNKER 220 (357)
Q Consensus 153 ~~l~~~~~d-----g~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~ 220 (357)
.+++.|+.+ ..+.+||..+.+ .+..+ .....-.+++...+..++.|+.++ .+.+||+.+
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~------- 133 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM--RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKS------- 133 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCC--SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTT-------
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCC--CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCC-------
Confidence 566666654 357888887654 22222 111111222222332456666543 466777651
Q ss_pred ccceeeeeEeeccccceeEEEEecCCCEEEEEecC-------CeEEEEecccCCceeeeeeccCCccceEEEeecCceEE
Q 038568 221 KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD-------RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLA 293 (357)
Q Consensus 221 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~ 293 (357)
.....+..+....... +++. -++++++.|+.+ ..+.+||+.+.+- .....+........++...+.+++
T Consensus 134 -~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~iyv 209 (302)
T 2xn4_A 134 -NEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW-TYIAEMSTRRSGAGVGVLNNLLYA 209 (302)
T ss_dssp -TEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE-EEECCCSSCCBSCEEEEETTEEEE
T ss_pred -CeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE-EECCCCccccccccEEEECCEEEE
Confidence 1222222222111111 2222 256667776542 3588999876542 222222222222344455666777
Q ss_pred EecCC-----CeEEEeeCCCCcceeeee
Q 038568 294 SGSAD-----RTVRIWQRGKENCYRCMA 316 (357)
Q Consensus 294 ~~~~d-----g~i~vw~~~~~~~~~~~~ 316 (357)
.|+.+ ..+.+||+.+.+ +..+.
T Consensus 210 ~GG~~~~~~~~~~~~yd~~~~~-W~~~~ 236 (302)
T 2xn4_A 210 VGGHDGPLVRKSVEVYDPTTNA-WRQVA 236 (302)
T ss_dssp ECCBSSSSBCCCEEEEETTTTE-EEEEC
T ss_pred ECCCCCCcccceEEEEeCCCCC-EeeCC
Confidence 77764 368899998763 44343
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.28 E-value=0.055 Score=44.34 Aligned_cols=178 Identities=8% Similarity=0.094 Sum_probs=98.3
Q ss_pred EEEEEEec-CeEEEEe-------------cCCeEEEEEcCcch-hhhhcc-cc-----ccccEEEEEEec--CC--eEEE
Q 038568 145 VSDLVVKQ-GLMYSVS-------------WDRSFKIWNASNYK-CLESVN-KA-----HEDAVNAVVVSD--NG--VVYT 199 (357)
Q Consensus 145 v~~~~~~~-~~l~~~~-------------~dg~i~iwd~~~~~-~~~~~~-~~-----~~~~v~~~~~~~--~~--~l~~ 199 (357)
.-++...+ ..+++++ .+|.|.++|.++.. ....+. .+ ..-....+.+.+ ++ +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 34455556 5555554 68999999987421 111221 11 223566777655 34 4544
Q ss_pred Ee-C--CCeEEEEEccccccccccccceeeeeEeecc-ccceeEEEEecCCCEEEEEec-----------------CCeE
Q 038568 200 GS-A--DGRIRVWERSVVDHNKERKSRHMLVTTLVKH-RSTVNALALNGDGSLLFSGGC-----------------DRWI 258 (357)
Q Consensus 200 ~~-~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-----------------dg~i 258 (357)
+. . +..|.+|++. ........+..+.+. -...+.+.+.++|++.++... .|.|
T Consensus 132 vnh~~~~s~ielf~~d------~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQ------EEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp EECSTTCCEEEEEEEE------TTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred EECCCCCCeEEEEEEE------CCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 43 2 5678888876 222233344444432 245789999999987777541 2456
Q ss_pred EEEecccCCceeeeeeccCCccceEEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEee-CC
Q 038568 259 VVWERERDHRMVFAEALWGHTGALLCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAIS-SS 334 (357)
Q Consensus 259 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~ 334 (357)
+-+|.. +. ... ...-...+.++++++ +.++-+..+.|..|++...........+. ..+....++..+ ++
T Consensus 206 yr~d~~--~~-~~~---~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G 278 (355)
T 3sre_A 206 TYYSPN--DV-RVV---AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTG 278 (355)
T ss_dssp EEECTT--CC-EEE---EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTC
T ss_pred EEEECC--eE-EEe---ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCC
Confidence 555553 21 111 111223466777766 44555567899999987432222223332 245567888888 47
Q ss_pred C
Q 038568 335 S 335 (357)
Q Consensus 335 ~ 335 (357)
.
T Consensus 279 ~ 279 (355)
T 3sre_A 279 D 279 (355)
T ss_dssp C
T ss_pred c
Confidence 6
No 308
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.22 E-value=0.13 Score=47.38 Aligned_cols=259 Identities=14% Similarity=0.182 Sum_probs=138.2
Q ss_pred ccceeEEEEe-cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCceEEeecCCeEEEEecCCccceee
Q 038568 29 HMIISCLAVH-NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQL 107 (357)
Q Consensus 29 ~~~i~~~~~s-~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 107 (357)
...|.++... ...|..|+.+-+..||. .+.+....... ....|.++....+.|..++.+ -+..+|..+.+.. .
T Consensus 62 ~~~i~~i~~d~~g~lWigT~~Gl~~yd~-~~~~f~~~~~~---~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~ 135 (758)
T 3ott_A 62 NTRIYCGVIIDNTYLYMGTDNGILVYNY-RADRYEQPETD---FPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-S 135 (758)
T ss_dssp SSCEEEEEEETTTEEEEEETTEEEEEET-TTTEECCCSCC---CCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEE-E
T ss_pred CceEEEEEEcCCCcEEEEeCCCeEEEeC-CCCEEECcccC---CCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-E
Confidence 4568998877 66777777667788998 55433221111 234577776544447777665 5778887654422 1
Q ss_pred eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCcchhhhh-ccc---cc
Q 038568 108 VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKCLES-VNK---AH 182 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~-~~~---~~ 182 (357)
+..... ......|.++.... ..|..++.+ -|..+|..+++.... ... ..
T Consensus 136 ~~~~~~-------------------------~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~ 189 (758)
T 3ott_A 136 FDTRRN-------------------------GLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQS 189 (758)
T ss_dssp ECHHHH-------------------------CCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCS
T ss_pred eccCCC-------------------------CcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccc
Confidence 110000 01124577887776 666667665 477788765442111 100 01
Q ss_pred cccEEEEEEecCC-eEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEE
Q 038568 183 EDAVNAVVVSDNG-VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVW 261 (357)
Q Consensus 183 ~~~v~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 261 (357)
...|.++...+++ .|..|.. +.+..+|... .. ......+ ....|.++...++|.+.+ |+.+| +.++
T Consensus 190 ~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~------~~--~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~~G-l~~~ 256 (758)
T 3ott_A 190 NLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST------GQ--IKQTEAF--HNNSIKSLALDGNGDLLA-GTDNG-LYVY 256 (758)
T ss_dssp SCCEEEEEEETTTTEEEEEEE-EEEEEEETTT------TE--EEEEEEE--EEEEEEEEEECTTCCEEE-EETTE-EEEE
T ss_pred cceeEEEEEECCCCEEEEEEC-CCCeEEcCCC------Ce--EEeccCC--CCCeEEEEEEcCCCCEEE-EeCCc-eeEE
Confidence 2348888887765 4566664 4677888651 11 1111111 234588888887776544 45554 8888
Q ss_pred ecccCCceeeeeec----cCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCcceeeeeee----cCCcCceEEEEEee
Q 038568 262 ERERDHRMVFAEAL----WGHTGALLCLINVGD-LLASGSADRTVRIWQRGKENCYRCMAFL----EGHEKPVKSLVAIS 332 (357)
Q Consensus 262 d~~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~----~~h~~~v~~~~~~~ 332 (357)
+..+.......... .-....|.++..+.+ .|-.|+..| +.++..... .+..... ......|.++.-..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~~~~--~~~~~~~~~~~~~~~~~v~~i~~D~ 333 (758)
T 3ott_A 257 HNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRYNSA--LQFIPISQITGTGDGNQFYSLFRDS 333 (758)
T ss_dssp CCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECT
T ss_pred ecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-ccccccCCc--eeEEecccCCCCCCCceEEEEEEcC
Confidence 87765321111110 012345777777655 555666667 544433221 1211100 01234577777666
Q ss_pred CCC
Q 038568 333 SSS 335 (357)
Q Consensus 333 ~~~ 335 (357)
++.
T Consensus 334 ~g~ 336 (758)
T 3ott_A 334 KGF 336 (758)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.21 E-value=0.057 Score=43.20 Aligned_cols=143 Identities=15% Similarity=0.191 Sum_probs=72.0
Q ss_pred CeEEEEecC-----CeEEEEEcCcchh--hhhccccccccEEEEEEecCC-eEEEEeCC-----CeEEEEEccccccccc
Q 038568 153 GLMYSVSWD-----RSFKIWNASNYKC--LESVNKAHEDAVNAVVVSDNG-VVYTGSAD-----GRIRVWERSVVDHNKE 219 (357)
Q Consensus 153 ~~l~~~~~d-----g~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~ 219 (357)
..++.|+.+ ..+.+||+.+.+- +... .....-.+++.. ++ .++.|+.+ ..+.+||+.+
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~------ 184 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM--QTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHT------ 184 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC--SSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTT------
T ss_pred EEEEEcccCCCcccceEEEEcCCCCeEEECCCC--CCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCC------
Confidence 555566543 3588888776442 2222 111111122222 45 45566544 4578888762
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEE
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLAS 294 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 294 (357)
.....+..+.........+. -++++++.|+.+ ..+.+||+.+.+- ..+..+........++...+.+++.
T Consensus 185 --~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~i~v~ 259 (301)
T 2vpj_A 185 --GHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW-TTVTSMTTPRCYVGATVLRGRLYAI 259 (301)
T ss_dssp --TEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEETTEEEEE
T ss_pred --CcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcE-EECCCCCCcccceeEEEECCEEEEE
Confidence 12222222221111112222 256777777764 4689999986542 2222222222223444556667777
Q ss_pred ecCC-----CeEEEeeCCCC
Q 038568 295 GSAD-----RTVRIWQRGKE 309 (357)
Q Consensus 295 ~~~d-----g~i~vw~~~~~ 309 (357)
|+.+ ..+.+||.++.
T Consensus 260 GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 260 AGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CCBCSSSBEEEEEEEETTTT
T ss_pred cCcCCCcccccEEEEcCCCC
Confidence 7765 46788898875
No 310
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.19 E-value=0.18 Score=48.50 Aligned_cols=173 Identities=13% Similarity=0.182 Sum_probs=105.7
Q ss_pred CeEEEEEcCcchhhhhccccccccEEEEEEe---cC--CeEEEEe----------CCCeEEEEEccccccccccccceee
Q 038568 162 RSFKIWNASNYKCLESVNKAHEDAVNAVVVS---DN--GVVYTGS----------ADGRIRVWERSVVDHNKERKSRHML 226 (357)
Q Consensus 162 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~---~~--~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~ 226 (357)
+.|++.|..+.+.+..+.......+.+++.- .+ .++++|. ..|.|++|++. . ...+.
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~------~--~kL~l 878 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS------D--GKLQT 878 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE------T--TEEEE
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE------C--CEEEE
Confidence 4688889888877766644455556666542 22 3577775 35789999986 1 12333
Q ss_pred eeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeC
Q 038568 227 VTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQR 306 (357)
Q Consensus 227 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~ 306 (357)
+... ..+++|++++-- +| +|++| ....|++|++...+.+........+ -.+..+...+++++.|..-..|.+...
T Consensus 879 v~~~-~v~g~v~al~~~-~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~vgD~~~Sv~~~~y 953 (1158)
T 3ei3_A 879 VAEK-EVKGAVYSMVEF-NG-KLLAS-INSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILVGDLMRSVLLLAY 953 (1158)
T ss_dssp EEEE-EESSCEEEEEEE-TT-EEEEE-ETTEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEEEESSBCEEEEEE
T ss_pred EEEE-EcCCcCEEEeee-CC-EEEEE-cCCEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEEEEhhheEEEEEE
Confidence 3322 246778887744 45 45444 3578999999866543311111111 113456667889999998888887665
Q ss_pred CCCc-ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 307 GKEN-CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 307 ~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
+..+ ....+. -..+...++++.+-.++ .++.+..+|.+.+.
T Consensus 954 ~~~~~~L~~~a-~D~~~~~vta~~~ld~~--------t~l~aD~~gNl~vl 995 (1158)
T 3ei3_A 954 KPMEGNFEEIA-RDFNPNWMSAVEILDDD--------NFLGAENAFNLFVC 995 (1158)
T ss_dssp ETTTTEEEEEE-ECCSCBCEEEEEEEETT--------EEEEEETTSEEEEE
T ss_pred EcCCCeEEEEE-eecccccEEEEEEEccC--------cEEEEcCCCcEEEE
Confidence 4321 222222 23456678999998765 57778888888764
No 311
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.15 E-value=0.068 Score=42.99 Aligned_cols=155 Identities=9% Similarity=0.101 Sum_probs=94.3
Q ss_pred EEEEEEec--CeEEEEe-cCCeEEEEEcCcchhhh-hcccc----c--cccEEEEEE---ecCCeEEEEeC---------
Q 038568 145 VSDLVVKQ--GLMYSVS-WDRSFKIWNASNYKCLE-SVNKA----H--EDAVNAVVV---SDNGVVYTGSA--------- 202 (357)
Q Consensus 145 v~~~~~~~--~~l~~~~-~dg~i~iwd~~~~~~~~-~~~~~----~--~~~v~~~~~---~~~~~l~~~~~--------- 202 (357)
-.+..|++ ..+..++ ..++|..||...+.... .+ .. . ...+..|.+ .|+++|++...
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~-~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVI-DGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECC-TTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEec-CCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 34678877 6666666 78999999987543222 22 11 1 124678999 58886544333
Q ss_pred -----CCeEEEEEcc---ccccccccccceeeeeEeec-----------cccceeEEEEecCCCEEEEEecC-CeEEEEe
Q 038568 203 -----DGRIRVWERS---VVDHNKERKSRHMLVTTLVK-----------HRSTVNALALNGDGSLLFSGGCD-RWIVVWE 262 (357)
Q Consensus 203 -----d~~i~i~d~~---~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~d-g~i~vwd 262 (357)
+..|..||+. +.+. .....+.. .......++..++|+..++++.. +.|...+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~--------~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKP--------VWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCC--------SEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccCCCCEEEEEcCCcCCCCCE--------EEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 6789999976 2211 11111111 11347899999999999988888 8888887
Q ss_pred cccCCceeeee-ec--cCCccceEEEeecCc--eEEEecCCCeEEEeeCCCC
Q 038568 263 RERDHRMVFAE-AL--WGHTGALLCLINVGD--LLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 263 ~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~ 309 (357)
..... ..... .. .........+++.|+ .|++....|.|..+|+.+.
T Consensus 166 pdG~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 166 ADGKT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp TTSCC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCCCE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 76432 22211 11 111222456677654 5665555999999999854
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.10 E-value=0.078 Score=42.62 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=71.3
Q ss_pred CeEEEEecC-----CeEEEEEcCcchh--hhhccccccccEEEEEEecCC-eEEEEeCC-----CeEEEEEccccccccc
Q 038568 153 GLMYSVSWD-----RSFKIWNASNYKC--LESVNKAHEDAVNAVVVSDNG-VVYTGSAD-----GRIRVWERSVVDHNKE 219 (357)
Q Consensus 153 ~~l~~~~~d-----g~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~ 219 (357)
.+++.|+.+ ..+.+||+.+.+- +..+ .....-.+++.. ++ .++.|+.+ ..+.+||+..
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~------ 193 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM--LTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPER------ 193 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTTTEEEECCCC--SSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTT------
T ss_pred EEEEEcCCCCCcccccEEEECCCCCeEeECCCC--CccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCC------
Confidence 555555533 3588888876532 2222 111111122222 44 45666554 4578888762
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEE
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLAS 294 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 294 (357)
.....+..+.........+.+ ++++++.|+.+ ..+.+||+.+.+ ...+..+........++...+.+++.
T Consensus 194 --~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~ 268 (308)
T 1zgk_A 194 --NEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET-WTFVAPMKHRRSALGITVHQGRIYVL 268 (308)
T ss_dssp --TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred --CeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc-EEECCCCCCCccceEEEEECCEEEEE
Confidence 122222222211111222222 56777777764 468999988653 22222222222223344455667777
Q ss_pred ecCC-----CeEEEeeCCCC
Q 038568 295 GSAD-----RTVRIWQRGKE 309 (357)
Q Consensus 295 ~~~d-----g~i~vw~~~~~ 309 (357)
|+.+ ..+.+||+.+.
T Consensus 269 GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 269 GGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp CCBCSSCBCCEEEEEETTTT
T ss_pred cCcCCCcccceEEEEcCCCC
Confidence 7754 45788888875
No 313
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.06 E-value=0.096 Score=50.63 Aligned_cols=228 Identities=9% Similarity=0.113 Sum_probs=123.0
Q ss_pred ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCe
Q 038568 49 EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNY 127 (357)
Q Consensus 49 ~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (357)
+|.|-|+ ..+..+..-. -.--+.-.+|.. +++--...++.|+|+++........
T Consensus 49 ~vvIidl-~~~~~~~rrp------i~AdsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~------------------ 103 (1630)
T 1xi4_A 49 QVVIIDM-NDPSNPIRRP------ISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHT------------------ 103 (1630)
T ss_pred eEEEEEC-CCCCCccccc------ccchhhccCCCcceEEEecCCeEEEeehHHhhhhcccc------------------
Confidence 8999998 5543331111 111233345654 4444446889999998876544332
Q ss_pred EEEecccccccccccccEEEEEEec-CeEEEEecCCeEEEEEcCc-chhhhhccccc----cccEEEEEEecCCe--EEE
Q 038568 128 VTVRRHKKRLWLEHWDAVSDLVVKQ-GLMYSVSWDRSFKIWNASN-YKCLESVNKAH----EDAVNAVVVSDNGV--VYT 199 (357)
Q Consensus 128 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~----~~~v~~~~~~~~~~--l~~ 199 (357)
...+|.--.|-. +.|+..+ +..|.-|++.. ..+...+ ..| ...|..-..+++.. +++
T Consensus 104 -------------~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~f-dR~~~L~~~QIinY~~d~~~kW~~l~ 168 (1630)
T 1xi4_A 104 -------------MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLT 168 (1630)
T ss_pred -------------cCCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHH-hcchhcccCeeEEeeeCCCCCeEEEE
Confidence 234566677766 6666555 45799999963 3444444 333 45566666677773 444
Q ss_pred Ee------CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEec--C-CCEEEEEec---CCeEEEEecccC-
Q 038568 200 GS------ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNG--D-GSLLFSGGC---DRWIVVWERERD- 266 (357)
Q Consensus 200 ~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~l~~~~~---dg~i~vwd~~~~- 266 (357)
|- -.|.+.+|..+ ....+.+.+|.+.-..+.... . ...++.+.. .+.++|.++...
T Consensus 169 gi~~~~~~v~G~mQLyS~e-----------r~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~ 237 (1630)
T 1xi4_A 169 GISAQQNRVVGAMQLYSVD-----------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPP 237 (1630)
T ss_pred eeccCCCcccceeeeeecc-----------cccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCc
Confidence 42 35788888876 223334455554433333321 1 122222211 368999988543
Q ss_pred --Cceeee---eeccC---CccceEEEeecCc--eEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEE
Q 038568 267 --HRMVFA---EALWG---HTGALLCLINVGD--LLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVA 330 (357)
Q Consensus 267 --~~~~~~---~~~~~---~~~~v~~~~~~~~--~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~ 330 (357)
...... ..+.. -...-.++..+++ .+..-+.-|.|.++|+.++ .++..-+-...+|...+.
T Consensus 238 ~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~---~~i~~~ris~~~iF~~~~ 308 (1630)
T 1xi4_A 238 TGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG---TCIYMNRISGETIFVTAP 308 (1630)
T ss_pred cCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccc---hhhhhccccCCceEEecc
Confidence 111000 00111 1112234444444 7777788899999999998 444444444455544433
No 314
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.02 E-value=0.13 Score=44.08 Aligned_cols=162 Identities=8% Similarity=0.037 Sum_probs=88.9
Q ss_pred ceEEEEEecC-c--eEEeec-CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEE
Q 038568 74 SVKSITFHIT-K--IFTAHQ-DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLV 149 (357)
Q Consensus 74 ~v~~l~~~~~-~--l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 149 (357)
....|+|.|. . |+.+.. .+.|++.|+.++.......... ........++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~---------------------------~~~~~p~~ia 192 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT---------------------------IPTNRIRSIA 192 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT---------------------------SSCSBEEEEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc---------------------------cccCCCcEEE
Confidence 3568899983 2 555544 3668888887665433322100 1234578899
Q ss_pred E-------ec--CeEEEEecCC-------eEEEEEcCc-chhh-----hhccccccccEEEEEEecC-Ce-EEEEeCCCe
Q 038568 150 V-------KQ--GLMYSVSWDR-------SFKIWNASN-YKCL-----ESVNKAHEDAVNAVVVSDN-GV-VYTGSADGR 205 (357)
Q Consensus 150 ~-------~~--~~l~~~~~dg-------~i~iwd~~~-~~~~-----~~~~~~~~~~v~~~~~~~~-~~-l~~~~~d~~ 205 (357)
| ++ +.|+.+...+ .|.+.+... +... ..+ . .......++++|+ +. +++-..++.
T Consensus 193 ~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v-~-~~~~p~giavdp~~g~LYvtd~~~g~ 270 (496)
T 3kya_A 193 FNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLI-A-AYKQCNGATIHPINGELYFNSYEKGQ 270 (496)
T ss_dssp ECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEE-E-EESCCCCEEECTTTCCEEEEETTTTE
T ss_pred EeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceee-c-cCCCceEEEEcCCCCeEEEEECCCCE
Confidence 9 77 5466665543 255665333 2221 122 1 1234457788884 44 556667888
Q ss_pred EEEEEcc-------ccccccccccc----eeeeeEeeccccceeEEEEecCCCEEEEE-ecCCeEEEEeccc
Q 038568 206 IRVWERS-------VVDHNKERKSR----HMLVTTLVKHRSTVNALALNGDGSLLFSG-GCDRWIVVWERER 265 (357)
Q Consensus 206 i~i~d~~-------~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~ 265 (357)
|..+|+. ........... ...+... +.......|+|+|++++|+.+ +....|+.++...
T Consensus 271 V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 271 VFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 9999986 11110000000 1111111 223446789999999965554 4577899877653
No 315
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.01 E-value=0.17 Score=45.17 Aligned_cols=186 Identities=13% Similarity=0.006 Sum_probs=106.0
Q ss_pred ccEEEEEEec--CeEE-EEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-e-EEEEeCCCeEEEEEccccccc
Q 038568 143 DAVSDLVVKQ--GLMY-SVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-V-VYTGSADGRIRVWERSVVDHN 217 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~d~~i~i~d~~~~~~~ 217 (357)
.....++|++ +.++ +-..++.|..+++........+ .........+++.+.+ . +++-...+.|.+.++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~-~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d----- 110 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV-EFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD----- 110 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE-eCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC-----
Confidence 4577899988 5554 4455788999988654332222 2222356678887654 4 4555567889999875
Q ss_pred cccccceeeeeEeeccccceeEEEEecCCCEEEEEec--CCeEEEEecccCCceeeeeeccCCccceEEEeecC--c-eE
Q 038568 218 KERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGC--DRWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D-LL 292 (357)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~l 292 (357)
... ...+ ....-.....|+++|....|+.... .+.|...++.......... .-.....+++++ + +.
T Consensus 111 -G~~--~~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~----~~~~P~GlalD~~~~~LY 181 (628)
T 4a0p_A 111 -GQH--RQVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP----NVGRANGLTIDYAKRRLY 181 (628)
T ss_dssp -STT--CEEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----SCSSEEEEEEETTTTEEE
T ss_pred -CCc--EEEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC----CCCCcceEEEccccCEEE
Confidence 111 1111 1123345689999996555655542 5678888887544322221 223445666664 3 44
Q ss_pred EEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 293 ASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 293 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
++-...+.|...++..... +.+. .......++++..+ . +++|-...+.|..
T Consensus 182 ~aD~~~~~I~~~d~dG~~~-~v~~---~~l~~P~glav~~~-~-------ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 182 WTDLDTNLIESSNMLGLNR-EVIA---DDLPHPFGLTQYQD-Y-------IYWTDWSRRSIER 232 (628)
T ss_dssp EEETTTTEEEEEETTSCSC-EEEE---ECCSCEEEEEEETT-E-------EEEEETTTTEEEE
T ss_pred EEECCCCEEEEEcCCCCce-EEee---ccCCCceEEEEECC-E-------EEEecCCCCEEEE
Confidence 5555678899999876432 2222 22233457776553 2 4555444555544
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.91 E-value=0.12 Score=41.57 Aligned_cols=70 Identities=19% Similarity=0.190 Sum_probs=40.5
Q ss_pred CCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCC-----CeEEEeeCCCCcceee
Q 038568 245 DGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSAD-----RTVRIWQRGKENCYRC 314 (357)
Q Consensus 245 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~ 314 (357)
++++++.|+.+ ..+.+||+.+.+- .....+........++...+.+++.|+.+ ..+.+||+.+.+ +..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~ 245 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET-WTF 245 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE-EEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeE-eeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc-EEE
Confidence 56677777654 4588999876532 22222222222223445566677777764 568999998763 443
Q ss_pred ee
Q 038568 315 MA 316 (357)
Q Consensus 315 ~~ 316 (357)
+.
T Consensus 246 ~~ 247 (308)
T 1zgk_A 246 VA 247 (308)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.89 E-value=0.079 Score=39.77 Aligned_cols=145 Identities=12% Similarity=0.030 Sum_probs=74.0
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEec
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWER 263 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 263 (357)
..+..++|+|++.|.+. .+|.+.-.+..+.+...-.. ....+-.. +- ..-..+.|.|+|.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~-Gw-~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMG-RAKKIGNG-GW-NQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHH-HCEEEECS-CG-GGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccc-cccEeccc-cc-ccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 46779999999987666 78876665543110000000 00111000 11 11478899999987777 6699988876
Q ss_pred ccCCceeeee--ec--cCCccceEEEeecCc-eEEEecCCCeEEEeeCCCCc--ce--eeeeeecCCcCceEEEEEeeCC
Q 038568 264 ERDHRMVFAE--AL--WGHTGALLCLINVGD-LLASGSADRTVRIWQRGKEN--CY--RCMAFLEGHEKPVKSLVAISSS 334 (357)
Q Consensus 264 ~~~~~~~~~~--~~--~~~~~~v~~~~~~~~-~l~~~~~dg~i~vw~~~~~~--~~--~~~~~~~~h~~~v~~~~~~~~~ 334 (357)
.+...-.-+. .. ..-=..+..+.+.|+ .|.+.. |+.++-+...+.. .+ .....-+..-..-+-+.|.+++
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 3322110000 00 011135678888888 666666 8875443333211 00 0011111223344557788888
Q ss_pred C
Q 038568 335 S 335 (357)
Q Consensus 335 ~ 335 (357)
.
T Consensus 194 ~ 194 (236)
T 1tl2_A 194 T 194 (236)
T ss_dssp C
T ss_pred c
Confidence 6
No 318
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.86 E-value=0.067 Score=40.15 Aligned_cols=154 Identities=10% Similarity=0.069 Sum_probs=80.0
Q ss_pred CceEEEEEecCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe
Q 038568 73 GSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151 (357)
Q Consensus 73 ~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 151 (357)
..+.+++|+|++ |... .+|.+.-.+..+.....-+.... .+=..-.....++.|.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t-----------------------~IG~~Gw~~F~a~~fD 96 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAK-----------------------KIGNGGWNQFQFLFFD 96 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCE-----------------------EEECSCGGGCSEEEEC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCccccccccc-----------------------EecccccccceEEEEC
Confidence 367799999988 6666 77876665554322111111000 0000011124788888
Q ss_pred c-CeEEEEecCCeEEEEEcCcchhhhhcc------ccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccce
Q 038568 152 Q-GLMYSVSWDRSFKIWNASNYKCLESVN------KAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRH 224 (357)
Q Consensus 152 ~-~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 224 (357)
+ ..|..+ .||.|.-++..+...-.-+. ...-..+..|.+.|+|.|.+.. |+.++-.... .. .....
T Consensus 97 ~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P--~~---~~~~w 169 (236)
T 1tl2_A 97 PNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPP--VS---NQDNW 169 (236)
T ss_dssp TTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCC--SS---TTCCH
T ss_pred CCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCC--CC---CCccc
Confidence 8 566666 67999888764322111110 1112467999999999877777 8885432211 00 00000
Q ss_pred e-eeeEee-ccccceeEEEEecCCCEEEEEecCCeEE
Q 038568 225 M-LVTTLV-KHRSTVNALALNGDGSLLFSGGCDRWIV 259 (357)
Q Consensus 225 ~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 259 (357)
. ....+- ..-..-..+.|.+++.+.++. ++.++
T Consensus 170 l~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 170 LARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp HHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 0 011111 222334457788888766665 77443
No 319
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.84 E-value=0.24 Score=44.21 Aligned_cols=153 Identities=13% Similarity=0.041 Sum_probs=88.1
Q ss_pred ccEEEEEEec--CeEEEEe-cCCeEEEEEcCcchhhhhccccccccEEEEEEecCC-e-EEEEeCCCeEEEEEccccccc
Q 038568 143 DAVSDLVVKQ--GLMYSVS-WDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNG-V-VYTGSADGRIRVWERSVVDHN 217 (357)
Q Consensus 143 ~~v~~~~~~~--~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l~~~~~d~~i~i~d~~~~~~~ 217 (357)
.....++|++ +.|+.+. ..+.|..+++........+....-.....+++.+.+ . +++-...+.|.+.++.
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d----- 114 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD----- 114 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-----
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC-----
Confidence 4567888887 5555444 467888888865432222212223567889999844 4 4555667899999986
Q ss_pred cccccceeeeeEe-eccccceeEEEEecCCCEEEEEec--CCeEEEEecccCCceeeeeeccCCccceEEEeecC--c-e
Q 038568 218 KERKSRHMLVTTL-VKHRSTVNALALNGDGSLLFSGGC--DRWIVVWERERDHRMVFAEALWGHTGALLCLINVG--D-L 291 (357)
Q Consensus 218 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~ 291 (357)
. .....+ ...-.....|+++|.+..|+.... .+.|...+++......... ..-.....++.++ . +
T Consensus 115 -G-----~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~---~~~~~P~Glald~~~~~L 185 (619)
T 3s94_A 115 -G-----SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN---SEIYWPNGLTLDYEEQKL 185 (619)
T ss_dssp -S-----CSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSSEEEEEEETTTTEE
T ss_pred -C-----CCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe---CCCCCCcEEEEEccCCEE
Confidence 1 111111 123345678999997666655543 4677777776433222221 1223345666664 3 4
Q ss_pred EEEecCCCeEEEeeCCCC
Q 038568 292 LASGSADRTVRIWQRGKE 309 (357)
Q Consensus 292 l~~~~~dg~i~vw~~~~~ 309 (357)
.++-...+.|...++...
T Consensus 186 Y~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 186 YWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EEEETTTCCEEEESSSCC
T ss_pred EEEeCCCCeEEEecCCCC
Confidence 455556778988888754
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.83 E-value=0.14 Score=41.29 Aligned_cols=71 Identities=6% Similarity=0.102 Sum_probs=40.6
Q ss_pred cCCCEEEEEec-C-----CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCC-----eEEEeeCCCCcce
Q 038568 244 GDGSLLFSGGC-D-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADR-----TVRIWQRGKENCY 312 (357)
Q Consensus 244 ~~~~~l~~~~~-d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vw~~~~~~~~ 312 (357)
.++++++.|+. + ..+.+||+.+.+ ......+........++...+.+++.|+.++ .+.+||+.+. .+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W 224 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN-KW 224 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT-EE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCe-EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCC-eE
Confidence 35667777766 2 468999988653 2222222222222334455666777777654 5888998876 34
Q ss_pred eeee
Q 038568 313 RCMA 316 (357)
Q Consensus 313 ~~~~ 316 (357)
..+.
T Consensus 225 ~~~~ 228 (315)
T 4asc_A 225 APFE 228 (315)
T ss_dssp EEEC
T ss_pred EECC
Confidence 4443
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.74 E-value=0.2 Score=41.81 Aligned_cols=118 Identities=9% Similarity=0.075 Sum_probs=72.8
Q ss_pred cEEEEEEec-CeEEEEecCCeEEEEEcCcchh----------hh--hcccc-----ccccEEEEEEecCC----eEEEEe
Q 038568 144 AVSDLVVKQ-GLMYSVSWDRSFKIWNASNYKC----------LE--SVNKA-----HEDAVNAVVVSDNG----VVYTGS 201 (357)
Q Consensus 144 ~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~----------~~--~~~~~-----~~~~v~~~~~~~~~----~l~~~~ 201 (357)
.|..+..+| ..+++-..+..|.|-.+..+.. +. .+..+ ...+|..+.|+|-+ .|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 567788888 4444444567888888763210 11 11111 25679999999965 499999
Q ss_pred CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe--cCCeEEEE
Q 038568 202 ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG--CDRWIVVW 261 (357)
Q Consensus 202 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~vw 261 (357)
.|+.|++||+......+..-...............|.+++|.+++-.|...+ .+|.|+-.
T Consensus 147 sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 147 EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999842211110000000011122336788999999887777755 78888765
No 322
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.72 E-value=0.16 Score=40.28 Aligned_cols=219 Identities=12% Similarity=0.085 Sum_probs=118.2
Q ss_pred CCceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEe
Q 038568 72 SGSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVK 151 (357)
Q Consensus 72 ~~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 151 (357)
...|..++.-....+.-. ||.+..|-.....+..... .....|..++..
T Consensus 23 ~~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~------------------------------~~~~~i~~ia~G 71 (282)
T 3qhy_B 23 QSGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPA------------------------------ATQSGVDAIAAG 71 (282)
T ss_dssp SSSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCG------------------------------GGGSCCCEEEEC
T ss_pred cCCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCc------------------------------cCCCCEEEEEeC
Confidence 346777777666522234 8999999866543322100 122357777777
Q ss_pred c-CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEe
Q 038568 152 Q-GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL 230 (357)
Q Consensus 152 ~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 230 (357)
. ..++. . ||.|..|-....-.+..- ......|..++...+..++. . +|.|..|-...... ...+
T Consensus 72 ~~hs~~l-~-~G~v~~wG~n~~Gqlg~P-~~~~~~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gq------lg~~---- 136 (282)
T 3qhy_B 72 NYHSLAL-K-DGEVIAWGGNEDGQTTVP-AEARSGVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQ------TTVP---- 136 (282)
T ss_dssp SSEEEEE-E-TTEEEEEECCTTSTTCCC-GGGSSSEEEEEEETTEEEEE-E-TTEEEEEECCTTST------TSCC----
T ss_pred CCEEEEE-E-CCEEEEeeCCCCCCCCCC-cccCCCeEEEECcCCEEEEE-e-CCeEEEecCCCCCc------CCCC----
Confidence 7 33444 5 999999986643322211 22234677777765544444 3 99999997652111 1111
Q ss_pred eccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCc
Q 038568 231 VKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 231 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 310 (357)
......|..++...+ ..+.-. ||.|+.|-.....++... ..-...|..++......+.- .||.|+.|-.....
T Consensus 137 ~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg~p---~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~g 209 (282)
T 3qhy_B 137 AEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTTVP---AEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYK 209 (282)
T ss_dssp GGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTSCC---GGGGSSEEEEEECSSEEEEE-ETTEEEEEECCTTS
T ss_pred ccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCCCc---eecCCCeEEEEecCCEEEEE-ECCeEEEEECCCCC
Confidence 112234666655433 222333 799999977654332211 11134577777766633333 69999999766431
Q ss_pred ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEec
Q 038568 311 CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVW 356 (357)
Q Consensus 311 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~w 356 (357)
+.- ........|..++...... .+++ ||.|..|
T Consensus 210 qlg---~p~~~~~~v~~i~~G~~h~-------~al~---~g~v~~w 242 (282)
T 3qhy_B 210 QTT---VPTEALSGVSAIASGEWYS-------LALK---NGKVIAW 242 (282)
T ss_dssp TTC---CCGGGGSSCCEEEECSSCE-------EEEE---TTEEEEE
T ss_pred CCC---CCcccCCCceEEEcCCCEE-------EEEE---CCEEEEe
Confidence 111 1111123466676555442 3333 7788777
No 323
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.70 E-value=0.18 Score=40.92 Aligned_cols=185 Identities=15% Similarity=0.207 Sum_probs=109.4
Q ss_pred eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---------CeE
Q 038568 85 IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---------GLM 155 (357)
Q Consensus 85 l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------~~l 155 (357)
++.....+-+.+||+ .++.++.+.. +.++.+..-| .++
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~--------------------------------g~~nnVD~r~~~~l~g~~~dla 89 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNT--------------------------------GKLNNVDIRYDFPLNGKKVDIA 89 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECC--------------------------------SCEEEEEEEEEEEETTEEEEEE
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccC--------------------------------CCcccEEEecccccCCceEeEE
Confidence 666667788999999 6665554421 2344444433 133
Q ss_pred EEEec---CCeEEEEEcC--cchhhhhccc---c--cc-ccEEEEEE--ecC-C--eEEEEeCCCeEEEEEccccccccc
Q 038568 156 YSVSW---DRSFKIWNAS--NYKCLESVNK---A--HE-DAVNAVVV--SDN-G--VVYTGSADGRIRVWERSVVDHNKE 219 (357)
Q Consensus 156 ~~~~~---dg~i~iwd~~--~~~~~~~~~~---~--~~-~~v~~~~~--~~~-~--~l~~~~~d~~i~i~d~~~~~~~~~ 219 (357)
++... +++|.+|++. ++ .+..+.. . .. ..+..+++ +|. + ++++...+|.+..|++.... .
T Consensus 90 ~as~R~~~~n~l~vf~iDp~~~-~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~---~ 165 (355)
T 3amr_A 90 AASNRSEGKNTIEIYAIDGKNG-TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADK---N 165 (355)
T ss_dssp EEEECSTTCCEEEEEEECTTTC-CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECT---T
T ss_pred EEeCCCCCCCeEEEEEECCCCC-ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCC---C
Confidence 44443 4789999773 33 2333311 1 11 45666777 663 4 48888889999999985210 1
Q ss_pred cccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCC--ceeeeeec-cCC-ccceEEEee--cC--c-
Q 038568 220 RKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDH--RMVFAEAL-WGH-TGALLCLIN--VG--D- 290 (357)
Q Consensus 220 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~-~~~-~~~v~~~~~--~~--~- 290 (357)
+....+.++.+.. .+.+..+...+....|+.+-++.-|..++.+... ....+... .++ ...+-.++. .+ +
T Consensus 166 g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~g 244 (355)
T 3amr_A 166 GYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKG 244 (355)
T ss_dssp SCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCE
T ss_pred CcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCE
Confidence 1124456666654 4578899999988899999998777777754221 11122222 122 224554544 33 2
Q ss_pred eEEEec-CCCeEEEeeCC
Q 038568 291 LLASGS-ADRTVRIWQRG 307 (357)
Q Consensus 291 ~l~~~~-~dg~i~vw~~~ 307 (357)
+|++++ .+++..+||.+
T Consensus 245 yLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 245 YLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEEGGGTEEEEEESS
T ss_pred EEEEEcCCCCEEEEEECC
Confidence 555444 67899999997
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.66 E-value=0.21 Score=41.03 Aligned_cols=59 Identities=10% Similarity=0.105 Sum_probs=36.5
Q ss_pred CceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEE-EcCCCCeEE
Q 038568 289 GDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIG-SGSLNGEIK 354 (357)
Q Consensus 289 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~-s~~~dg~v~ 354 (357)
++++++.-..+.|...++..++.......+......+..+++.|++. +++ +-..+|.|.
T Consensus 289 g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~-------lyv~td~~~g~I~ 348 (353)
T 2g8s_A 289 QKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY-------LYVLTDESSGELL 348 (353)
T ss_dssp TEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC-------EEEEECSTTEEEE
T ss_pred CcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc-------EEEEEeCCCCEEE
Confidence 45777777788888888875422222222223345789999999987 555 444566553
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.51 E-value=0.24 Score=39.87 Aligned_cols=144 Identities=15% Similarity=0.154 Sum_probs=71.5
Q ss_pred CeEEEEecC--------CeEEEEEcCcch--hhhhccccccccEEEEEEecCCeEEEEeC-C-----CeEEEEEcccccc
Q 038568 153 GLMYSVSWD--------RSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDNGVVYTGSA-D-----GRIRVWERSVVDH 216 (357)
Q Consensus 153 ~~l~~~~~d--------g~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~l~~~~~-d-----~~i~i~d~~~~~~ 216 (357)
..++.|+.+ ..+.+||..+.+ .+..+ .....-.+++...+..++.|+. + ..+.+||+.+
T Consensus 100 ~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--- 174 (315)
T 4asc_A 100 SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL--PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKK--- 174 (315)
T ss_dssp EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC--SSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTT---
T ss_pred EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC--CCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCC---
Confidence 555566532 458888987653 22222 1111112223333334566665 2 4688888762
Q ss_pred ccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCC-----eEEEEecccCCceeeeeeccCCccceEEEeecCce
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR-----WIVVWERERDHRMVFAEALWGHTGALLCLINVGDL 291 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 291 (357)
.....+..+.........+. -++++++.|+.++ .+.+||+.+.+ ...+..+........++...+.+
T Consensus 175 -----~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~l 246 (315)
T 4asc_A 175 -----FEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNK-WAPFEAFPQERSSLSLVSLVGTL 246 (315)
T ss_dssp -----TEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEE
T ss_pred -----CeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCe-EEECCCCCCcccceeEEEECCEE
Confidence 12222222221111112222 2667777777654 58889987653 22222222222223444556667
Q ss_pred EEEecCC--------------CeEEEeeCCCC
Q 038568 292 LASGSAD--------------RTVRIWQRGKE 309 (357)
Q Consensus 292 l~~~~~d--------------g~i~vw~~~~~ 309 (357)
++.|+.+ ..+.+||+.+.
T Consensus 247 ~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 247 YAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EEECCccccCcCCccccccccCcEEEecCCCC
Confidence 7777653 24778888876
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.50 E-value=0.23 Score=39.61 Aligned_cols=144 Identities=14% Similarity=0.166 Sum_probs=71.5
Q ss_pred cCeEEEEecCC-----eEEEEEcCcchh--hhhccccccccEEEEEEecCC-eEEEEeC-------CCeEEEEEcccccc
Q 038568 152 QGLMYSVSWDR-----SFKIWNASNYKC--LESVNKAHEDAVNAVVVSDNG-VVYTGSA-------DGRIRVWERSVVDH 216 (357)
Q Consensus 152 ~~~l~~~~~dg-----~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~-~l~~~~~-------d~~i~i~d~~~~~~ 216 (357)
...++.|+.++ .+.+||+.+.+- +..+ .....-.+++.. ++ .++.|+. -..+.+||+..
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~--- 182 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM--NTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATT--- 182 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC--SSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTT---
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC--CCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCC---
Confidence 35666666543 477888776432 2222 111111222222 44 3555543 23578888762
Q ss_pred ccccccceeeeeEeeccccceeEEEEecCCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCce
Q 038568 217 NKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDL 291 (357)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 291 (357)
.....+..+....... ++.. -++++++.|+.+ ..+.+||+.+.+- ..+..+........++...+.+
T Consensus 183 -----~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~~~~r~~~~~~~~~~~i 254 (302)
T 2xn4_A 183 -----NEWTYIAEMSTRRSGA-GVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAW-RQVADMNMCRRNAGVCAVNGLL 254 (302)
T ss_dssp -----TEEEEECCCSSCCBSC-EEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEEETTEE
T ss_pred -----CcEEECCCCccccccc-cEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCE-eeCCCCCCccccCeEEEECCEE
Confidence 1222222222111111 2222 256777777764 3688999886532 2222222222222344456667
Q ss_pred EEEecCCC-----eEEEeeCCCC
Q 038568 292 LASGSADR-----TVRIWQRGKE 309 (357)
Q Consensus 292 l~~~~~dg-----~i~vw~~~~~ 309 (357)
++.|+.++ .+.+||+.+.
T Consensus 255 ~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 255 YVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEECCBCSSSBCCCEEEEETTTT
T ss_pred EEECCcCCCcccccEEEEcCCCC
Confidence 77777653 4889999876
No 327
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.47 E-value=0.17 Score=41.65 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=47.4
Q ss_pred ccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEe---eccccceeEEEEecC---CCEEEEEec---
Q 038568 184 DAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL---VKHRSTVNALALNGD---GSLLFSGGC--- 254 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~--- 254 (357)
.....+++.|++.|+++..+|.|+++|.. + . ..+..+ .........|+++|+ +..|+++..
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~~-------G--~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~ 98 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISPS-------G--K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFA 98 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECSS-------C--E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeCC-------C--c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccC
Confidence 35678999999988888888999998732 1 1 122211 122355789999997 455555443
Q ss_pred -C----CeEEEEecccC
Q 038568 255 -D----RWIVVWERERD 266 (357)
Q Consensus 255 -d----g~i~vwd~~~~ 266 (357)
+ +.|..|+....
T Consensus 99 ~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 99 EGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp GGGCEEEEEEEEEECSS
T ss_pred CCCCcceEEEEEEECCC
Confidence 3 56777877643
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.37 E-value=0.19 Score=48.68 Aligned_cols=185 Identities=11% Similarity=0.148 Sum_probs=104.2
Q ss_pred Eec-CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeee
Q 038568 150 VKQ-GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVT 228 (357)
Q Consensus 150 ~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 228 (357)
.+| ..+++--...++.|+|+.+...+..+ .....|.-=.|-.+..|+..+ +..|+-|++.. ...+..
T Consensus 73 MnP~~~iiALrag~~lQiFnl~~k~klks~--~~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~---------~s~P~k 140 (1630)
T 1xi4_A 73 MNPASKVIALKAGKTLQIFNIEMKSKMKAH--TMTDDVTFWKWISLNTVALVT-DNAVYHWSMEG---------ESQPVK 140 (1630)
T ss_pred cCCCcceEEEecCCeEEEeehHHhhhhccc--ccCCCceEEEecCCCeeEEEc-CCeEEEeccCC---------CCccHH
Confidence 445 33333334789999999998888887 345567777777666544333 45899999962 122333
Q ss_pred Eeecc----ccceeEEEEecCCCEEEEEe-------cCCeEEEEecccCCceeeeeeccCCccceEEEeecCc-----eE
Q 038568 229 TLVKH----RSTVNALALNGDGSLLFSGG-------CDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD-----LL 292 (357)
Q Consensus 229 ~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~l 292 (357)
.+..| ...|..-..+++.++++..+ -.|.+.+|+.+... .+.+.||.+.-..+...+. .+
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~----sQ~iegha~~F~~~~~~~~~~~~~l~ 216 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLF 216 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc----chhhhHhHhhhheeccCCCCCCceEE
Confidence 33323 35576777788888776443 35788999887553 3445566555444433322 22
Q ss_pred EEecC---CCeEEEeeCCCC-c---ce--eeeeeec---CCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 293 ASGSA---DRTVRIWQRGKE-N---CY--RCMAFLE---GHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 293 ~~~~~---dg~i~vw~~~~~-~---~~--~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
+.+.. .+.++|-++..+ . .+ +.+..+. ...+-..++..++.-. ++..-..-|.|.+||
T Consensus 217 ~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-------~iy~itk~G~~~~~d 286 (1630)
T 1xi4_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-------VVFLITKYGYIHLYD 286 (1630)
T ss_pred EEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-------EEEEEecCceEEEEe
Confidence 22221 368888888553 1 00 0011111 1122233455555544 555666677777775
No 329
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.35 E-value=0.3 Score=39.19 Aligned_cols=232 Identities=8% Similarity=0.121 Sum_probs=127.9
Q ss_pred cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCcccee-eeeecCcccc
Q 038568 39 NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQ-LVSTLPTVKD 116 (357)
Q Consensus 39 ~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~ 116 (357)
.+.||.-....+.|+|+ ++.+.++.+. ..+.|.-=.|-.+. |+-.+ +..|.-|+++...... .+...+..
T Consensus 78 ~~ViALrag~~LQiFnl-etK~klks~~----~~e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L-- 149 (365)
T 2xzh_A 78 SKVIALKAGKTLQIFNI-EMKSKMKAHT----MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSL-- 149 (365)
T ss_dssp SSEEEEEETTEEEEEET-TTTEEEEEEE----CSSCEEEEEECSSSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGG--
T ss_pred ccEEEEecCCeEEEech-HHhhhhccee----cCCccEEEEecCCCeEEEEc-CCcEEEEcccCCCCCceeeecchhc--
Confidence 45555555339999999 8888888887 56788877887655 44433 4679999997643222 22211111
Q ss_pred ceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-------cCCeEEEEEcCcchhhhhccccccccEE
Q 038568 117 RLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-------WDRSFKIWNASNYKCLESVNKAHEDAVN 187 (357)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 187 (357)
....|..-..++ +.++..+ -.|.+.+|..+.+. -+.+ .+|.....
T Consensus 150 ------------------------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~i-eGhaa~F~ 203 (365)
T 2xzh_A 150 ------------------------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI-EGHAASFA 203 (365)
T ss_dssp ------------------------TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEE-CCSEEEEE
T ss_pred ------------------------ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-ccee-eeeeeeeE
Confidence 012333333333 2222221 13678899876532 2233 56655544
Q ss_pred EEEEecCC---eEEE-EeC---CCeEEEEEcccc-ccccccccceeeeeEee---ccccceeEEEEecCCCEEEEEecCC
Q 038568 188 AVVVSDNG---VVYT-GSA---DGRIRVWERSVV-DHNKERKSRHMLVTTLV---KHRSTVNALALNGDGSLLFSGGCDR 256 (357)
Q Consensus 188 ~~~~~~~~---~l~~-~~~---d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg 256 (357)
.+....+. .|++ +.. .+++++.++... ..... ...+....+. ....-.-++..++.-..++.-+.-|
T Consensus 204 ~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~--f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G 281 (365)
T 2xzh_A 204 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQP--FPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 281 (365)
T ss_dssp EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCC--CCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTS
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCC--cccccceeeCCccccCCceEEEEecccCCEEEEEeCCc
Confidence 44332221 2322 222 268899888532 11111 0111111111 1234456788888778899999999
Q ss_pred eEEEEecccCCceeeeeeccCCccceEEEeecC--ceEEEecCCCeEEEeeCCCC
Q 038568 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVG--DLLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 257 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~vw~~~~~ 309 (357)
.|++||+.++..+..-+ + ....|..-+.+. .-++.....|.|.--.++..
T Consensus 282 ~ihlyDleTgt~i~~nr-I--S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 282 YIHLYDLETGTCIYMNR-I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp EEEEEETTTCCEEEEEE-C--CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred EEEEEEcccCcEEEEec-c--CCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 99999999998654332 2 233443333322 25555557777766666543
No 330
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.20 E-value=0.4 Score=39.14 Aligned_cols=238 Identities=11% Similarity=0.079 Sum_probs=116.5
Q ss_pred CCCceEEEEEecCc-eEEeec-CCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEE
Q 038568 71 SSGSVKSITFHITK-IFTAHQ-DCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDL 148 (357)
Q Consensus 71 ~~~~v~~l~~~~~~-l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 148 (357)
.-.....|+|.|++ ++.+.. .|.|++++...++. ..+..++ .++.........|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~~~-----------------------~v~~~g~~GllGi 85 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGEVP-----------------------GVSPSGEGGLLGI 85 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECT-----------------------TCCCBTTBSEEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecccC-----------------------ceeecCCCCceee
Confidence 34567899999998 666666 89999998655432 2222111 1111334567889
Q ss_pred EEec-----CeEEEE---ecCCeEEEEEcCcch----------hh-hhccccccccEEEEEEecCCeEEEE-e-------
Q 038568 149 VVKQ-----GLMYSV---SWDRSFKIWNASNYK----------CL-ESVNKAHEDAVNAVVVSDNGVVYTG-S------- 201 (357)
Q Consensus 149 ~~~~-----~~l~~~---~~dg~i~iwd~~~~~----------~~-~~~~~~~~~~v~~~~~~~~~~l~~~-~------- 201 (357)
+++| ..|+.. ..++.|.-|.+..+. .+ ..+..........|.|.|+|.|..+ +
T Consensus 86 a~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~ 165 (347)
T 3das_A 86 ALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGL 165 (347)
T ss_dssp EECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGG
T ss_pred EeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCcc
Confidence 9987 344433 234556666654321 11 1111111223456999999964433 2
Q ss_pred ------CCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEe-cCCeEEEEecccCCc------
Q 038568 202 ------ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERDHR------ 268 (357)
Q Consensus 202 ------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~------ 268 (357)
..|.|.-++... .....+.-........+|.+ ...++|+|+|.+.++=. .|+.=.|--+..+..
T Consensus 166 ~qd~~~~~G~IlRi~~dG--~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~ 242 (347)
T 3das_A 166 SQDRKSLGGKILRMTPDG--EPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEA 242 (347)
T ss_dssp TTCTTCSTTCEEEECTTS--SBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTC
T ss_pred ccCCCCCCCEEEEEeCCC--CccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcc
Confidence 134554444431 00000000000111224443 46899999876554432 232222222222211
Q ss_pred ---------eeeeeeccCCccceEEEeecC-ceEEEecCCCeEEEeeCCCCcc-eeeeeeecCCcCceEEEEEeeCCC
Q 038568 269 ---------MVFAEALWGHTGALLCLINVG-DLLASGSADRTVRIWQRGKENC-YRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 269 ---------~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~vw~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
......+..+......++|.. ..+...-..+.|....+..... .+....+.+....+.+|+..||+.
T Consensus 243 ~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ 320 (347)
T 3das_A 243 EGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDK 320 (347)
T ss_dssp CSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTE
T ss_pred cCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCc
Confidence 001111111222345555544 4555555566666666654421 112233445557899999999987
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.18 E-value=0.38 Score=38.73 Aligned_cols=71 Identities=11% Similarity=0.253 Sum_probs=39.3
Q ss_pred cCCCEEEEEec------CCeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCC-----CeEEEeeCCCCcce
Q 038568 244 GDGSLLFSGGC------DRWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSAD-----RTVRIWQRGKENCY 312 (357)
Q Consensus 244 ~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vw~~~~~~~~ 312 (357)
.++++++.|+. -..+.+||+.+.+ ......+........++...+.+++.|+.+ ..+.+||+.+.+ +
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD-WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK-W 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC-E
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCE-EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe-E
Confidence 46667777764 2358999988654 222222222222223444566666666643 357789988763 4
Q ss_pred eeee
Q 038568 313 RCMA 316 (357)
Q Consensus 313 ~~~~ 316 (357)
..+.
T Consensus 235 ~~~~ 238 (318)
T 2woz_A 235 EVMT 238 (318)
T ss_dssp EECC
T ss_pred EECC
Confidence 4443
No 332
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.13 E-value=0.44 Score=39.03 Aligned_cols=93 Identities=13% Similarity=0.222 Sum_probs=55.2
Q ss_pred CCeEEEEEcCcchh----hhhccccccccEEEEEEecCCeEEEEeC------------------CCeEEEEEcccccccc
Q 038568 161 DRSFKIWNASNYKC----LESVNKAHEDAVNAVVVSDNGVVYTGSA------------------DGRIRVWERSVVDHNK 218 (357)
Q Consensus 161 dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~l~~~~~------------------d~~i~i~d~~~~~~~~ 218 (357)
+.+|.+|++..... +..+....-...+.+.+.++|.+.++.. .|.|..+|..
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~------ 211 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN------ 211 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT------
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC------
Confidence 46777877654322 2222122234678999999997555432 1334444321
Q ss_pred ccccceeeeeEeeccccceeEEEEecCCCEEEEEe-cCCeEEEEecccC
Q 038568 219 ERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGG-CDRWIVVWERERD 266 (357)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~ 266 (357)
+ ...+...-...+.++|+||++.|+.+. ..+.|..|++...
T Consensus 212 ------~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 212 ------D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp ------C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred ------e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 1 112222234568999999998777665 5788999998743
No 333
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.01 E-value=0.65 Score=39.92 Aligned_cols=152 Identities=11% Similarity=0.099 Sum_probs=82.0
Q ss_pred eeEEEEe---cceEEEee-CC-ceEEEeccCCccccceeccccCCCCceEEEEE-------ecCc--eEEeecCC-----
Q 038568 32 ISCLAVH---NSLLYAAS-LN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITF-------HITK--IFTAHQDC----- 92 (357)
Q Consensus 32 i~~~~~s---~~~l~t~~-~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~-------~~~~--l~~~~~d~----- 92 (357)
-..|+|+ +..|+.+. .. .|++.|+ +.+.....+............|+| ++++ |+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~-~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDL-KNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEET-TTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEEC-CCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4567777 24455444 44 8999998 664444333321112346889999 8775 55555443
Q ss_pred --eEEEEecCC-cccee-e-eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec---CeEEEEecCCeE
Q 038568 93 --KIRVWKITA-SRQHQ-L-VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ---GLMYSVSWDRSF 164 (357)
Q Consensus 93 --~i~vwd~~~-~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i 164 (357)
.|.+.+... +.... . ...+. . ......++.+| .++++-..++.|
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~---------------------------~-~~~p~giavdp~~g~LYvtd~~~g~V 271 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA---------------------------A-YKQCNGATIHPINGELYFNSYEKGQV 271 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE---------------------------E-ESCCCCEEECTTTCCEEEEETTTTEE
T ss_pred CceEEEEecCCCCceeecccceeec---------------------------c-CCCceEEEEcCCCCeEEEEECCCCEE
Confidence 244554322 11100 0 00000 0 11234567777 445555677889
Q ss_pred EEEEcC-------cchh-----------hhh-ccccccccEEEEEEecCCe--EEEEeCCCeEEEEEcc
Q 038568 165 KIWNAS-------NYKC-----------LES-VNKAHEDAVNAVVVSDNGV--VYTGSADGRIRVWERS 212 (357)
Q Consensus 165 ~iwd~~-------~~~~-----------~~~-~~~~~~~~v~~~~~~~~~~--l~~~~~d~~i~i~d~~ 212 (357)
..+|+. ++.. ... +..........++++|++. +++-.....|+.++..
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 999987 4432 011 1112234467899999994 4444567888887754
No 334
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.97 E-value=0.039 Score=44.80 Aligned_cols=193 Identities=11% Similarity=0.071 Sum_probs=101.4
Q ss_pred cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEe---cC-ceEEe--ecCCeEEEEecCCccceeeeeec
Q 038568 39 NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFH---IT-KIFTA--HQDCKIRVWKITASRQHQLVSTL 111 (357)
Q Consensus 39 ~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~---~~-~l~~~--~~d~~i~vwd~~~~~~~~~~~~~ 111 (357)
+.+++.++.| .|.-.|. ++++..-.+... ...++....-. .+ .++.+ +.||.|..++..++.....+...
T Consensus 10 ~~~V~v~t~dG~l~Ald~-~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDR-RNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEET-TTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEEC-CCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 6788899999 9999999 888888887752 11222221111 12 24433 58999999998877543222211
Q ss_pred CccccceeeeecCCCeEEEecccccccccccccEEE---EEE-------ecCeEEEEecCCeEEEEEcCcchhhhhcccc
Q 038568 112 PTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD---LVV-------KQGLMYSVSWDRSFKIWNASNYKCLESVNKA 181 (357)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 181 (357)
. . -...++.. ... ....+++|+.+|.+...|+++|+.+..+...
T Consensus 87 ~-l-------------------------v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 Q-L-------------------------VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp H-H-------------------------HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred c-c-------------------------eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 0 0 01111111 001 2367899999999999999999999887432
Q ss_pred cccc------EEEEEE------ecCCeEEEEeCCCeEEEEEccccccccccccceee-eeEeecccc--ce-eEEEEecC
Q 038568 182 HEDA------VNAVVV------SDNGVVYTGSADGRIRVWERSVVDHNKERKSRHML-VTTLVKHRS--TV-NALALNGD 245 (357)
Q Consensus 182 ~~~~------v~~~~~------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~--~v-~~~~~~~~ 245 (357)
.... ..|... ..++.++.+..+..+.+.+ + .+. .... ......... ++ ..-..+.+
T Consensus 141 ~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~------sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~D 212 (339)
T 2be1_A 141 SKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-Y------DGA-SYNVTYSTWQQNVLDVPLALQNTFSKD 212 (339)
T ss_dssp CBCC--------------------CCEEEEEEEEEECEECC-T------TSC-CCCCEEEEEECCTTTHHHHTTCSSCSS
T ss_pred CCcccccccccccccccccccccCCCeEEEecceEEEEEEC-C------CCC-eEEEecccccccccccccccccccccC
Confidence 2111 111111 1123566666666655544 2 111 1110 111111100 00 00001224
Q ss_pred CCEEEEEecCCeEEEEecccCCce
Q 038568 246 GSLLFSGGCDRWIVVWERERDHRM 269 (357)
Q Consensus 246 ~~~l~~~~~dg~i~vwd~~~~~~~ 269 (357)
+.+ +.++.||.|.-+|..++...
T Consensus 213 g~~-~~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 213 GMC-IAPFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp SCC-EEEETTTEEEEECSTTCCEE
T ss_pred CcE-EEECCCCEEEEEECCCCcEE
Confidence 555 45788999999998877743
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.77 E-value=0.59 Score=37.57 Aligned_cols=64 Identities=13% Similarity=0.255 Sum_probs=37.3
Q ss_pred CCCEEEEEecC-----CeEEEEecccCCceeeeeeccCCccceEEEeecCceEEEecCC--------------CeEEEee
Q 038568 245 DGSLLFSGGCD-----RWIVVWERERDHRMVFAEALWGHTGALLCLINVGDLLASGSAD--------------RTVRIWQ 305 (357)
Q Consensus 245 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--------------g~i~vw~ 305 (357)
++++++.|+.+ ..+.+||+.+.+ ...+..+........++...+.+++.|+.+ ..+.+||
T Consensus 206 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd 284 (318)
T 2woz_A 206 KGKIVIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYE 284 (318)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEETTTCC-EEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEE
T ss_pred CCEEEEEcCcCCCCccceEEEEECCCCe-EEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEe
Confidence 56777777653 357789987654 222222222222234445566677777654 3578889
Q ss_pred CCCC
Q 038568 306 RGKE 309 (357)
Q Consensus 306 ~~~~ 309 (357)
+.+.
T Consensus 285 ~~~~ 288 (318)
T 2woz_A 285 DDKK 288 (318)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8876
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.56 E-value=0.27 Score=39.92 Aligned_cols=110 Identities=7% Similarity=0.080 Sum_probs=65.6
Q ss_pred CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEe---cCCeEEEE--eCCCeEEEEEccccccccccccceeee
Q 038568 153 GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVS---DNGVVYTG--SADGRIRVWERSVVDHNKERKSRHMLV 227 (357)
Q Consensus 153 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~---~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~ 227 (357)
+.++.++.||.|.-.|.++|+.+.++......++....-. .++.++.+ ..||.|..++.. .+ ...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~------~G----~~~ 80 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH------QG----LQK 80 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT------TE----EEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC------CC----cEE
Confidence 5788999999999999999998888733211222221100 13344433 589999999976 21 111
Q ss_pred eEeec----cccceeE---EEE-e----cCCCEEEEEecCCeEEEEecccCCceeee
Q 038568 228 TTLVK----HRSTVNA---LAL-N----GDGSLLFSGGCDRWIVVWERERDHRMVFA 272 (357)
Q Consensus 228 ~~~~~----~~~~v~~---~~~-~----~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 272 (357)
..+.. ...++.. ... . ..+..+++|+.+|.+...|+++++.+...
T Consensus 81 ~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 81 LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 11110 1112211 000 0 13557899999999999999999865444
No 337
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.45 E-value=0.87 Score=37.33 Aligned_cols=69 Identities=12% Similarity=0.119 Sum_probs=40.0
Q ss_pred ceeEEEEe--cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecC----c-eEEeecC------CeEEE
Q 038568 31 IISCLAVH--NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHIT----K-IFTAHQD------CKIRV 96 (357)
Q Consensus 31 ~i~~~~~s--~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----~-l~~~~~d------~~i~v 96 (357)
.-..++|. |+ |+++..+ .|++++- ...+.+..+............|+++|+ + |+.+... +.|..
T Consensus 32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGG-MLIAERPGRIRLFRE-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSC-EEEEETTTEEEEEET-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCe-EEEEeCCCeEEEEEC-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 35688998 65 5555666 8888873 332222222110013457889999998 3 5444332 56777
Q ss_pred EecCC
Q 038568 97 WKITA 101 (357)
Q Consensus 97 wd~~~ 101 (357)
++...
T Consensus 110 ~~~~~ 114 (352)
T 2ism_A 110 LRHLG 114 (352)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 77664
No 338
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.42 E-value=0.68 Score=37.93 Aligned_cols=50 Identities=6% Similarity=-0.012 Sum_probs=26.3
Q ss_pred CeEEEEecccCCceeeeeeccC-CccceEEEeecCceEEEecC------CCeEEEeeC
Q 038568 256 RWIVVWERERDHRMVFAEALWG-HTGALLCLINVGDLLASGSA------DRTVRIWQR 306 (357)
Q Consensus 256 g~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~------dg~i~vw~~ 306 (357)
..+.+||+.+.+- .....+.. ......++...+.+++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W-~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQW-SYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEE-EEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcE-EECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 5789999886542 22222221 11112334445556666664 245777876
No 339
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.40 E-value=1 Score=37.82 Aligned_cols=232 Identities=8% Similarity=0.108 Sum_probs=128.4
Q ss_pred cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCcccee-eeeecCcccc
Q 038568 39 NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQ-LVSTLPTVKD 116 (357)
Q Consensus 39 ~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~~~ 116 (357)
.+.||.=...++.|+|+ ++.+.++.+. ....|.-=.|-.+. |+-.+ +..|.-|+++...... .+...+..
T Consensus 77 ~~iiALrag~~lQiFnl-e~K~klks~~----~~e~VvfWkWis~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L-- 148 (494)
T 1bpo_A 77 SKVIALKAGKTLQIFNI-EMKSKMKAHT----MTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSL-- 148 (494)
T ss_dssp SSCEEEEETTEEEEEET-TTTEEEEEEE----CSSCCCEEEEEETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGG--
T ss_pred CcEEEEecCCeEEEEch-HHhhhhccee----cCCCceEEEecCCCeEEEEc-CCeeEEecccCCCCchhheecchhc--
Confidence 34555554339999999 8888888887 45567677776554 44444 4679999997643222 22211111
Q ss_pred ceeeeecCCCeEEEecccccccccccccEEEEEEec--CeEEEEe-------cCCeEEEEEcCcchhhhhccccccccEE
Q 038568 117 RLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ--GLMYSVS-------WDRSFKIWNASNYKCLESVNKAHEDAVN 187 (357)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 187 (357)
....|..-..++ +.++..+ -.|.+.+|..+.+. -+.+ .+|.....
T Consensus 149 ------------------------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~i-eGhaa~F~ 202 (494)
T 1bpo_A 149 ------------------------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI-EGHAASFA 202 (494)
T ss_dssp ------------------------TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEE-CCSEEEEE
T ss_pred ------------------------ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchh-eeeeeeeE
Confidence 012333333333 2222211 24678899886533 2233 56666555
Q ss_pred EEEEecCC---e-EEEEeC---CCeEEEEEcccc-ccccccccceeeeeEee---ccccceeEEEEecCCCEEEEEecCC
Q 038568 188 AVVVSDNG---V-VYTGSA---DGRIRVWERSVV-DHNKERKSRHMLVTTLV---KHRSTVNALALNGDGSLLFSGGCDR 256 (357)
Q Consensus 188 ~~~~~~~~---~-l~~~~~---d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg 256 (357)
.+....+. . ++.+.. .+.+.+.++... ...... ..+....+. ....-..++..++.-..++.-+.-|
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f--~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G 280 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG 280 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC--CCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTS
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc--cceeeeeeCCcccccCceeEEEecccCCEEEEEecCc
Confidence 55443222 2 333322 378999998632 111000 111111111 1234456788899888899999999
Q ss_pred eEEEEecccCCceeeeeeccCCccceEEEeecC--ceEEEecCCCeEEEeeCCCC
Q 038568 257 WIVVWERERDHRMVFAEALWGHTGALLCLINVG--DLLASGSADRTVRIWQRGKE 309 (357)
Q Consensus 257 ~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~vw~~~~~ 309 (357)
.|++||+.++..+..-+ + ....|...+.+. .-++.....|.|.--.++..
T Consensus 281 ~i~lyDleTgt~i~~nr-I--s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 281 YIHLYDLETGTCIYMNR-I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EEEEEETTTCCEEEEEE-C--CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred eEEEEecccceeeeeec-c--cCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 99999999998654333 2 233443333332 25555557776666655543
No 340
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.46 E-value=1.4 Score=34.74 Aligned_cols=238 Identities=12% Similarity=0.091 Sum_probs=131.7
Q ss_pred ceeEEEEe-cceEEEeeCC-ceEEEeccCCccccceeccccCCCCceEEEEEecCc-eEEeecCCeEEEEecCCccceee
Q 038568 31 IISCLAVH-NSLLYAASLN-EINVFDLISDYSHVDTFSNDLSSSGSVKSITFHITK-IFTAHQDCKIRVWKITASRQHQL 107 (357)
Q Consensus 31 ~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-l~~~~~d~~i~vwd~~~~~~~~~ 107 (357)
.|..++.. ...++. . | .|..|-....++. ..-.. ....|..++...+. ++. . ||.|..|-.....+...
T Consensus 25 ~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gql-g~p~~---~~~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQL-TMPAA---TQSGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSSEEEEE-E-TTEEEEEECCSSSTT-SCCGG---GGSCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCC-CCCcc---CCCCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence 57777776 334444 4 7 9999987333332 21111 33467777777666 444 4 89999998665432211
Q ss_pred eeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhccccccccEE
Q 038568 108 VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVN 187 (357)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 187 (357)
.. .-...|..++......+.-. ||.|..|-....-.+..- ......|.
T Consensus 97 P~------------------------------~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~-~~~~~~i~ 144 (282)
T 3qhy_B 97 PA------------------------------EARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVP-AEAQSGVT 144 (282)
T ss_dssp CG------------------------------GGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEE
T ss_pred Cc------------------------------ccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCC-ccCCCCeE
Confidence 00 11246888888775555555 999999986653333221 23345677
Q ss_pred EEEEecCCeEEEEeCCCeEEEEEccccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCC
Q 038568 188 AVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDH 267 (357)
Q Consensus 188 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 267 (357)
.++.-....++. . ||.|..|-...... ...+. .....|..++...+ ..++. .||.|+.|-.....
T Consensus 145 ~i~~G~~~~~~l-~-~G~v~~wG~n~~gq------lg~p~----~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~g 209 (282)
T 3qhy_B 145 ALDGGVYTALAV-K-NGGVIAWGDNYFGQ------TTVPA----EAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRYK 209 (282)
T ss_dssp EEEECSSEEEEE-E-TTEEEEEECCTTST------TSCCG----GGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTTS
T ss_pred EEEcccCEEEEE-E-CCEEEEecCCCCCC------CCCce----ecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCCC
Confidence 776654433443 3 79999997652111 11110 11245666665433 23333 59999999766543
Q ss_pred ceeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCCCcceeeeeeecCCcCceEEEEEeeCC
Q 038568 268 RMVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGKENCYRCMAFLEGHEKPVKSLVAISSS 334 (357)
Q Consensus 268 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 334 (357)
++.... .....|..++......+.-. ||.|+.|-.....+.. . ...|.+++.....
T Consensus 210 qlg~p~---~~~~~v~~i~~G~~h~~al~-~g~v~~wG~n~~gq~~---v----~~~v~~iaaG~~h 265 (282)
T 3qhy_B 210 QTTVPT---EALSGVSAIASGEWYSLALK-NGKVIAWGSSRTAPSS---V----QSGVSSIEAGPNA 265 (282)
T ss_dssp TTCCCG---GGGSSCCEEEECSSCEEEEE-TTEEEEESTTCCCCGG---G----SSCEEEEEECSSC
T ss_pred CCCCCc---ccCCCceEEEcCCCEEEEEE-CCEEEEecCCCCcccc---C----CCCcEEEEECcCe
Confidence 321111 11234666666555433334 9999999776542211 1 2357777666654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.27 E-value=3.1 Score=37.81 Aligned_cols=147 Identities=12% Similarity=0.114 Sum_probs=75.9
Q ss_pred CeEEEEecC------CeEEEEEcCcch--hhhhccccccccEEEEEEecCC-eEEEEeCCC--eEEEEEccccccccccc
Q 038568 153 GLMYSVSWD------RSFKIWNASNYK--CLESVNKAHEDAVNAVVVSDNG-VVYTGSADG--RIRVWERSVVDHNKERK 221 (357)
Q Consensus 153 ~~l~~~~~d------g~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~--~i~i~d~~~~~~~~~~~ 221 (357)
..++.|+.+ ..+.+||..+.+ .+..+ .....-.+++...++ .++.|+.++ .+.+||+.+
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~--p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t-------- 522 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL--SHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE-------- 522 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC--SBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT--------
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC--CCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC--------
Confidence 556666543 357888887643 22222 111111223332355 466666544 688888762
Q ss_pred cceeeeeE---eeccccceeEEEEecC-CCEEEEEec--C-----CeEEEEecccCCc-----eeeeeec-cCCccceEE
Q 038568 222 SRHMLVTT---LVKHRSTVNALALNGD-GSLLFSGGC--D-----RWIVVWERERDHR-----MVFAEAL-WGHTGALLC 284 (357)
Q Consensus 222 ~~~~~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~vwd~~~~~~-----~~~~~~~-~~~~~~v~~ 284 (357)
.....+.. .........++.+..+ +++++.|+. + +.+.+||+.+..- ....... ........+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~ 602 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEE
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceE
Confidence 12222221 1111222233555655 667777765 2 4588999987761 2222221 111222344
Q ss_pred Eeec-CceEEEecC--------CCeEEEeeCCCC
Q 038568 285 LINV-GDLLASGSA--------DRTVRIWQRGKE 309 (357)
Q Consensus 285 ~~~~-~~~l~~~~~--------dg~i~vw~~~~~ 309 (357)
+... +.+++.|+. ...+.+||+.+.
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 4555 667777774 346899999876
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.11 E-value=2.5 Score=36.10 Aligned_cols=62 Identities=10% Similarity=0.148 Sum_probs=37.9
Q ss_pred ccEEEEEEecCCeEEEEeCCC-eEEEEEccccccccccccceeeeeEee------ccccceeEEEEecC---CCEEEEEe
Q 038568 184 DAVNAVVVSDNGVVYTGSADG-RIRVWERSVVDHNKERKSRHMLVTTLV------KHRSTVNALALNGD---GSLLFSGG 253 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~l~~~~ 253 (357)
.....|+|.|+|.|+++...+ .|++++... + ....+..+. ........|+|+|+ +..|..+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~------g--~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPES------G--SVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT------C--CEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCC------C--cEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 345799999999877777775 688887531 1 111122221 12456779999995 55555443
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.61 E-value=2.5 Score=34.48 Aligned_cols=110 Identities=12% Similarity=0.028 Sum_probs=63.6
Q ss_pred eccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeec----cCCccceEEEeecCc-----eEEE---ecCC
Q 038568 231 VKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEAL----WGHTGALLCLINVGD-----LLAS---GSAD 298 (357)
Q Consensus 231 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~-----~l~~---~~~d 298 (357)
...-...+.|+|.|+|+++++--..|.|++++...+... .+..+ .......+.++++|+ .|.. ...+
T Consensus 28 a~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 28 ATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred ecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 333455689999999997777655899999987654422 22211 123455788898873 3332 2345
Q ss_pred CeEEEeeCCCCc-------ceee-eeeec-CCcCceEEEEEeeCCCCCCCCeEEEEEcC
Q 038568 299 RTVRIWQRGKEN-------CYRC-MAFLE-GHEKPVKSLVAISSSSSASNGIVSIGSGS 348 (357)
Q Consensus 299 g~i~vw~~~~~~-------~~~~-~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~l~s~~ 348 (357)
+.|.-|.+..+. ..+. +..+. .....-..|.|.|++. +.++.+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-------Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-------LYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-------EEEECB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-------EEEEEC
Confidence 566666665421 1122 22222 1122346799999987 666644
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.03 E-value=5.1 Score=36.38 Aligned_cols=148 Identities=11% Similarity=0.131 Sum_probs=73.3
Q ss_pred CeEEEEecC----CeEEEEEcCcchhhhhc-c-----ccccccEEEEEEec-CC-eEEEEeCC------CeEEEEEcccc
Q 038568 153 GLMYSVSWD----RSFKIWNASNYKCLESV-N-----KAHEDAVNAVVVSD-NG-VVYTGSAD------GRIRVWERSVV 214 (357)
Q Consensus 153 ~~l~~~~~d----g~i~iwd~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~-~l~~~~~d------~~i~i~d~~~~ 214 (357)
..++.|+.+ ..+.+||..+.+-...- . ......-.+++..+ ++ .++.|+.+ ..+.+||+.+
T Consensus 399 ~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t- 477 (695)
T 2zwa_A 399 DVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKT- 477 (695)
T ss_dssp CEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTT-
T ss_pred EEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCC-
Confidence 666666643 45788888765321110 0 01111122334443 55 45666543 3477788761
Q ss_pred ccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCC--eEEEEecccCCceeeeee---ccCCccceEEEeec-
Q 038568 215 DHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDR--WIVVWERERDHRMVFAEA---LWGHTGALLCLINV- 288 (357)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~---~~~~~~~v~~~~~~- 288 (357)
.....+..+...... .+++.-.++++++.|+.++ .+.+||..+.. ...... .........++.+.
T Consensus 478 -------~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 478 -------REWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp -------TEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEET
T ss_pred -------CcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeC
Confidence 122222222211111 1222224778888887655 68999988654 212211 11111122233444
Q ss_pred --CceEEEecC--C-----CeEEEeeCCCCc
Q 038568 289 --GDLLASGSA--D-----RTVRIWQRGKEN 310 (357)
Q Consensus 289 --~~~l~~~~~--d-----g~i~vw~~~~~~ 310 (357)
+.+++.|+. + +.+.+||+.+..
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 446777765 2 468899998875
No 345
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.28 E-value=7.9 Score=32.99 Aligned_cols=100 Identities=12% Similarity=0.032 Sum_probs=55.5
Q ss_pred cceeEEEEecCCCEEEEEecCCeEEEEecccCCceeeeeecc------CCccceEEEeecC----c-eEEEecC------
Q 038568 235 STVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVFAEALW------GHTGALLCLINVG----D-LLASGSA------ 297 (357)
Q Consensus 235 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~----~-~l~~~~~------ 297 (357)
.....|+|.|+|+++++-...+.|++++..++... .+..+. ......+.++++| + .|.....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~-~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVK-TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe-EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 45679999999997776554457988886544322 222221 1244567888886 3 3333221
Q ss_pred -------CCeEEEeeCCCCc----ceeeee-eec-CCcCceEEEEEeeCCC
Q 038568 298 -------DRTVRIWQRGKEN----CYRCMA-FLE-GHEKPVKSLVAISSSS 335 (357)
Q Consensus 298 -------dg~i~vw~~~~~~----~~~~~~-~~~-~h~~~v~~~~~~~~~~ 335 (357)
...|.-|+..... ..+.+. .+. ........|+|.|++.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 2355556553321 112222 122 1223468999999987
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.07 E-value=13 Score=32.56 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=52.0
Q ss_pred cccEEEEEEecCCe--EEEEeCCCeEEEEEcccccccccc---ccceeeeeEeeccccceeEEEEecCCCEEEEEecCCe
Q 038568 183 EDAVNAVVVSDNGV--VYTGSADGRIRVWERSVVDHNKER---KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRW 257 (357)
Q Consensus 183 ~~~v~~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 257 (357)
......+..+|||+ ++.|-.+.++.++|++........ ........... -.......+|.++|.-..+---|.+
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecce
Confidence 34445678899994 556667899999999843221000 11111122222 3345678999999965556668999
Q ss_pred EEEEeccc
Q 038568 258 IVVWERER 265 (357)
Q Consensus 258 i~vwd~~~ 265 (357)
|..|++..
T Consensus 401 vvkWni~~ 408 (638)
T 3sbq_A 401 VVKWNMEE 408 (638)
T ss_dssp EEEEEHHH
T ss_pred EEEEeccH
Confidence 99999975
No 347
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=86.72 E-value=12 Score=30.92 Aligned_cols=163 Identities=11% Similarity=0.096 Sum_probs=86.4
Q ss_pred cEEEEEEecCeEEEEecCCeEEEEEcCcchhhh-----------hccccccccEEEEEEec-CCeEEEEeCCCeEEEEEc
Q 038568 144 AVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLE-----------SVNKAHEDAVNAVVVSD-NGVVYTGSADGRIRVWER 211 (357)
Q Consensus 144 ~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------~~~~~~~~~v~~~~~~~-~~~l~~~~~d~~i~i~d~ 211 (357)
.|..++......+....+|.|..|-....-.+. .+.......+..++... +...++-..||.|..|-.
T Consensus 160 ~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 160 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEEC
T ss_pred eEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeC
Confidence 577777777667777789999999754321111 00011223466666543 234556678899999975
Q ss_pred cccccccccccceee-eeEeec-cccceeEEEEecCCCEEEEEecCCeEEEEecccCCce---------eeeeeccCCcc
Q 038568 212 SVVDHNKERKSRHML-VTTLVK-HRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM---------VFAEALWGHTG 280 (357)
Q Consensus 212 ~~~~~~~~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~ 280 (357)
............... ...+.. ....|..++... .+.++-..||.|+.|-.....++ .+.....-...
T Consensus 240 n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~ 317 (389)
T 3kci_A 240 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 317 (389)
T ss_dssp CGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTC
T ss_pred CCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCC
Confidence 422111010001111 111111 122355555543 34555578999999976432111 11111111123
Q ss_pred ceEEEeecCceEEEecCCCeEEEeeCCC
Q 038568 281 ALLCLINVGDLLASGSADRTVRIWQRGK 308 (357)
Q Consensus 281 ~v~~~~~~~~~l~~~~~dg~i~vw~~~~ 308 (357)
.|..++......++-..||.|+.|-...
T Consensus 318 ~v~~ia~G~~h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 318 KVIAIATGSLHCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp CEEEEEECSSEEEEEETTCCEEEEECCT
T ss_pred CEEEEEeccCeEEEECCCCCEEEeeCCC
Confidence 4667776666666678899999997654
No 348
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=86.72 E-value=12 Score=30.60 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=32.3
Q ss_pred cceeEEEEec-------CCCEEEEEecCCeEEEEecccCCceeeeeeccCCccceEEEeecCc
Q 038568 235 STVNALALNG-------DGSLLFSGGCDRWIVVWERERDHRMVFAEALWGHTGALLCLINVGD 290 (357)
Q Consensus 235 ~~v~~~~~~~-------~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 290 (357)
.....++|.. ++.++++.-..+.|...++..++.......+......+..+++.++
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd 333 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPD 333 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTT
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCC
Confidence 4567788864 4667777667888888888754322111112122235666666655
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.56 E-value=14 Score=31.48 Aligned_cols=56 Identities=20% Similarity=0.130 Sum_probs=34.1
Q ss_pred cceeEEEEecCCC-EEEEEecCCeEEEEecccCCceeeeeec---c------CCccceEEEeecCc
Q 038568 235 STVNALALNGDGS-LLFSGGCDRWIVVWERERDHRMVFAEAL---W------GHTGALLCLINVGD 290 (357)
Q Consensus 235 ~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~------~~~~~v~~~~~~~~ 290 (357)
...+.|+|.|++. .|+++...|.|++++.........+..+ . ......+.++++|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3457899999985 4555678899999975432111111111 1 11355788999885
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=84.94 E-value=22 Score=33.64 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=29.4
Q ss_pred ceeEEEEecCCCEEEEEecCCeEEEEecccCCcee
Q 038568 236 TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMV 270 (357)
Q Consensus 236 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 270 (357)
.+.+++..++..++++-+.|+++|+|++.+++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 46677777888899999999999999999887543
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.17 E-value=20 Score=33.94 Aligned_cols=35 Identities=17% Similarity=0.460 Sum_probs=29.0
Q ss_pred cEEEEEEec--CeEEEEecCCeEEEEEcCcchhhhhc
Q 038568 144 AVSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLESV 178 (357)
Q Consensus 144 ~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~ 178 (357)
.+.+++..+ .++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 456666666 78999999999999999999887764
No 352
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=81.04 E-value=23 Score=29.52 Aligned_cols=255 Identities=8% Similarity=0.004 Sum_probs=123.9
Q ss_pred cceeEEEEecceEEEeeCC-ceEEEeccCCccc----------cceeccccCCCCceEEEEEecCceEEeecC-CeEEEE
Q 038568 30 MIISCLAVHNSLLYAASLN-EINVFDLISDYSH----------VDTFSNDLSSSGSVKSITFHITKIFTAHQD-CKIRVW 97 (357)
Q Consensus 30 ~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~----------~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d-~~i~vw 97 (357)
..|..|+.-+...+.-..| .|..|-....+++ ...+.. .....|..++.-.+..+.-..| +.|..|
T Consensus 16 ~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~--l~~~~i~~va~G~~ht~al~~~gg~v~~w 93 (406)
T 4d9s_A 16 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA--LDGHQIVSVTCGADHTVAYSQSGMEVYSW 93 (406)
T ss_dssp CCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGG--GTTSCEEEEEECSSEEEEEETTTTEEEEE
T ss_pred cceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecc--cCCCCEEEEEeCcceEEEEECCCCEEEEE
Confidence 4566666655555555566 8888876222221 011111 0234677777666663333444 589999
Q ss_pred ecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhh-
Q 038568 98 KITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLE- 176 (357)
Q Consensus 98 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~- 176 (357)
-.....++-.-.. .. . .... .+.......|..++......+.-..+|.|..|-....-.+.
T Consensus 94 G~n~~GqLG~g~~----~~----------~--~~p~--~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~ 155 (406)
T 4d9s_A 94 GWGDFGRLGHGNS----SD----------L--FTPL--PIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGL 155 (406)
T ss_dssp ECCGGGTTCSSSC----CC----------E--EEEE--ECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCS
T ss_pred cCCCCcCCCCCCC----Cc----------c--ccce--EecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCC
Confidence 6543221110000 00 0 0000 00001223677777777677777889999999754321111
Q ss_pred ----------hccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccc--eeeeeEeeccccceeEEEEec
Q 038568 177 ----------SVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSR--HMLVTTLVKHRSTVNALALNG 244 (357)
Q Consensus 177 ----------~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~ 244 (357)
.+.......|..++...+ ..++-..+|.|+.|-............. ..+..........|..++..
T Consensus 156 g~~~~~~~p~~v~~~~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G- 233 (406)
T 4d9s_A 156 GDTEDSLVPQKIQAFEGIRIKMVAAGAE-HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG- 233 (406)
T ss_dssp SSCCCEEEEEECGGGTTCCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC-
T ss_pred CCCCCcccceEecccCCCcEEEEecCCC-eEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC-
Confidence 010011224555554332 4445567899999975422111000001 11111111112345555543
Q ss_pred CCCEEEEEecCCeEEEEecccCCce---------eeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCC
Q 038568 245 DGSLLFSGGCDRWIVVWERERDHRM---------VFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRG 307 (357)
Q Consensus 245 ~~~~l~~~~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~ 307 (357)
..+.+.-..+|.|+.|-.....++ .+.....-....|..++......++-..||.|+.|-..
T Consensus 234 -~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n 304 (406)
T 4d9s_A 234 -WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWN 304 (406)
T ss_dssp -SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred -CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEEEEcCCCeEEEeeCC
Confidence 335555678899999965432211 01111111123466666666666666789999999654
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.03 E-value=7.7 Score=35.01 Aligned_cols=36 Identities=11% Similarity=0.369 Sum_probs=30.0
Q ss_pred ccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhhc
Q 038568 143 DAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLESV 178 (357)
Q Consensus 143 ~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 178 (357)
..|.++.+...++++-+.|+++|+|++++++++...
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 456666666689999999999999999999877665
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.98 E-value=34 Score=29.19 Aligned_cols=28 Identities=4% Similarity=0.029 Sum_probs=22.8
Q ss_pred CceEEEEEecCc---eEEeecCCeEEEEecC
Q 038568 73 GSVKSITFHITK---IFTAHQDCKIRVWKIT 100 (357)
Q Consensus 73 ~~v~~l~~~~~~---l~~~~~d~~i~vwd~~ 100 (357)
.....|+|.|++ |+.+...|.|++++..
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 355789999986 8888899999999754
No 355
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=75.03 E-value=35 Score=28.39 Aligned_cols=255 Identities=11% Similarity=0.051 Sum_probs=125.8
Q ss_pred ceeEEEEe-cceEEEeeCC-ceEEEeccCCccc----------cceeccccCCCCceEEEEEecCceEEeecCCeEEEEe
Q 038568 31 IISCLAVH-NSLLYAASLN-EINVFDLISDYSH----------VDTFSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWK 98 (357)
Q Consensus 31 ~i~~~~~s-~~~l~t~~~d-~i~iw~~~~~~~~----------~~~~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd 98 (357)
.|..++.. ...+|....+ .|+.|-....++. ...+.. .....|..|+--....+.-..||.|..|-
T Consensus 69 ~i~~va~G~~ht~al~~~gg~v~~wG~n~~GqLG~g~~~~~~~p~~v~~--l~~~~i~~ia~G~~h~~alt~~G~v~~wG 146 (406)
T 4d9s_A 69 QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGIRIKQIACGDSHCLAVTMEGEVQSWG 146 (406)
T ss_dssp CEEEEEECSSEEEEEETTTTEEEEEECCGGGTTCSSSCCCEEEEEECGG--GTTCCEEEEEECSSEEEEEETTSCEEEEE
T ss_pred CEEEEEeCcceEEEEECCCCEEEEEcCCCCcCCCCCCCCccccceEecc--cCCCCEEEEEEChhheEEEcCCCcEEEeC
Confidence 57777666 3444444455 8888865222111 001111 12336777776666666667899999997
Q ss_pred cCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhh-
Q 038568 99 ITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLES- 177 (357)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~- 177 (357)
.....++-.-... .. ..+. .+.......|..++......+.-..+|.|..|-....-.+..
T Consensus 147 ~n~~GqLG~g~~~----~~------------~~p~--~v~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g 208 (406)
T 4d9s_A 147 RNQNGQLGLGDTE----DS------------LVPQ--KIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLG 208 (406)
T ss_dssp CCTTSTTCSSSCC----CE------------EEEE--ECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSS
T ss_pred CCCCccCCCCCCC----Cc------------ccce--EecccCCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCC
Confidence 6543221110000 00 0000 000011235777777666777778899999997543221110
Q ss_pred ----------ccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccccccceeee-eEee-ccccceeEEEEecC
Q 038568 178 ----------VNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLV-TTLV-KHRSTVNALALNGD 245 (357)
Q Consensus 178 ----------~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~ 245 (357)
+.......|..++.-.. ..++-..+|.|+.|-................. ..+. .....|..++-.
T Consensus 209 ~~~~~~~p~~v~~~~~~~i~~va~G~~-ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G-- 285 (406)
T 4d9s_A 209 DRTDRLVPERVTSTGGEKMSMVACGWR-HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG-- 285 (406)
T ss_dssp SSCCEEEEEECCCSTTCCEEEEEECSS-EEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--
T ss_pred CCCCcCccEEecccCCceEEEEEECCC-cEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--
Confidence 00111234555544322 34445678999998754221111111011111 1111 112235555443
Q ss_pred CCEEEEEecCCeEEEEecccCCce---------eeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCC
Q 038568 246 GSLLFSGGCDRWIVVWERERDHRM---------VFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGK 308 (357)
Q Consensus 246 ~~~l~~~~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~ 308 (357)
....++-..||.|+.|=.....++ .+..........|..++......++-..||.|+.|=...
T Consensus 286 ~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 286 WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSSEEEEEETTSCEEEEECCT
T ss_pred CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCCeEEEEeCCCCEEEecCCC
Confidence 345555578899999965432111 111111112335666776666666667899999997643
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.03 E-value=22 Score=31.15 Aligned_cols=73 Identities=11% Similarity=0.029 Sum_probs=47.5
Q ss_pred cceeEEEEecCCCEEEEEec-CCeEEEEecccCCce------e----eeeeccCCccceEEEeecCc--eEEEecCCCeE
Q 038568 235 STVNALALNGDGSLLFSGGC-DRWIVVWERERDHRM------V----FAEALWGHTGALLCLINVGD--LLASGSADRTV 301 (357)
Q Consensus 235 ~~v~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~------~----~~~~~~~~~~~v~~~~~~~~--~l~~~~~dg~i 301 (357)
.....+.++|||+++++++. +.++.++|++..... . ...... -.-..+..+|+++ ...+---|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceE
Confidence 34567889999998887765 889999999842210 0 011111 1223355677766 45566689999
Q ss_pred EEeeCCC
Q 038568 302 RIWQRGK 308 (357)
Q Consensus 302 ~vw~~~~ 308 (357)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999865
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.51 E-value=28 Score=31.57 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=25.7
Q ss_pred ceEEEeecCceEEEecCCCeEEEeeCCCCc
Q 038568 281 ALLCLINVGDLLASGSADRTVRIWQRGKEN 310 (357)
Q Consensus 281 ~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~ 310 (357)
.|.++.+...++++-+.|.++|+|++.+++
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCc
Confidence 466777777799999999999999999973
No 358
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=70.06 E-value=47 Score=27.73 Aligned_cols=255 Identities=5% Similarity=-0.009 Sum_probs=123.7
Q ss_pred CceEEEEEecCceEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEec
Q 038568 73 GSVKSITFHITKIFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQ 152 (357)
Q Consensus 73 ~~v~~l~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 152 (357)
..|..|+.-....+.-..||.|..|-.....++-.-......... | ........|..++...
T Consensus 75 ~~v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~------P------------~~v~~~~~i~~va~G~ 136 (423)
T 3mvd_K 75 PDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESK------P------------DLIDLPGKALCISAGD 136 (423)
T ss_dssp SSEEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSS------C------------EECCCSSCEEEEEECS
T ss_pred CCceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccC------C------------eEEcCCCCEEEEEcCc
Confidence 346667666666666678999999976543221110000000000 0 0001123577777766
Q ss_pred CeEEEEecCCeEEEEEc--Ccchhhhh---------ccccccccEEEEEEecCCeEEEEeCCCeEEEEEcccccccccc-
Q 038568 153 GLMYSVSWDRSFKIWNA--SNYKCLES---------VNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKER- 220 (357)
Q Consensus 153 ~~l~~~~~dg~i~iwd~--~~~~~~~~---------~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~- 220 (357)
...+.-..||.|..|-. ...-.+.. ........|..++...+ ..++-..+|.|+.|-..........
T Consensus 137 ~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G~~-hs~alt~~G~v~~wG~n~~GqLG~~~ 215 (423)
T 3mvd_K 137 SHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASGAD-HLVILTTAGKVFTVGCAEQGQLGRLS 215 (423)
T ss_dssp SEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEECSS-EEEEEETTSCEEEEECCTTSTTSSCC
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecCCC-eEEEEecCCeEEEeeCCcCCccCCCc
Confidence 66667788999999975 22111100 00112334555554332 4455567899999965421111000
Q ss_pred ------------ccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCceee--------eeeccCCcc
Q 038568 221 ------------KSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMVF--------AEALWGHTG 280 (357)
Q Consensus 221 ------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~--------~~~~~~~~~ 280 (357)
.....+..........|..++.... ..++.-..+|.|+.|-.....++-. .........
T Consensus 216 ~~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~ 294 (423)
T 3mvd_K 216 ERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELK 294 (423)
T ss_dssp TTTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCC
T ss_pred ccccccccccccccccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCC
Confidence 0001111111122334555554422 2333336889999996543211100 000000123
Q ss_pred ceEEEeecCceEEEecCCCeEEEeeCCCCc---------ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCC
Q 038568 281 ALLCLINVGDLLASGSADRTVRIWQRGKEN---------CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNG 351 (357)
Q Consensus 281 ~v~~~~~~~~~l~~~~~dg~i~vw~~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg 351 (357)
.|..++....+.+.-..||.|+.|-..... .......+..-...|..|+..... .++ -..||
T Consensus 295 ~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~h--------s~a-lt~~G 365 (423)
T 3mvd_K 295 DIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVC--------SYA-VTIDG 365 (423)
T ss_dssp SEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTE--------EEE-EETTS
T ss_pred CeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCe--------EEE-EcCCC
Confidence 566676666666666789999999654210 011111222222367777665543 222 34678
Q ss_pred eEEec
Q 038568 352 EIKVW 356 (357)
Q Consensus 352 ~v~~w 356 (357)
.|..|
T Consensus 366 ~v~~w 370 (423)
T 3mvd_K 366 KLYSW 370 (423)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 88877
No 359
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=69.00 E-value=50 Score=27.59 Aligned_cols=255 Identities=9% Similarity=-0.003 Sum_probs=127.6
Q ss_pred eeEEEEecceEEEeeCC-ceEEEeccCCccccce-------e-ccccCCCCceEEEEEecCceEEeecCCeEEEEec--C
Q 038568 32 ISCLAVHNSLLYAASLN-EINVFDLISDYSHVDT-------F-SNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKI--T 100 (357)
Q Consensus 32 i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~~-------~-~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~--~ 100 (357)
|..|+..+...+.-..| .|+.|-....+++-.. . .........|..|+......+.-..||.|..|-. .
T Consensus 77 v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~~wG~~~n 156 (423)
T 3mvd_K 77 AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGSFRD 156 (423)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCEEEEECEEC
T ss_pred ceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEEEEeCCCC
Confidence 66666555555555677 9999976222221100 0 0000023467777766666566678999999985 3
Q ss_pred CccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhh---
Q 038568 101 ASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLES--- 177 (357)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~--- 177 (357)
...++-.-.. ...... . .+ .....|..++......+.-..+|.|..|-....-.+..
T Consensus 157 ~~GqlG~~~~---~~~~~p----------~-----~~--~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~ 216 (423)
T 3mvd_K 157 SHGNMGLTID---GNKRTP----------I-----DL--MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSE 216 (423)
T ss_dssp SSSEEESBTT---BCEEEE----------E-----ES--STTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCT
T ss_pred CCCCcCcCCC---CCCcee----------e-----Ee--cCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcc
Confidence 2211110000 000000 0 00 12346777777777777778899999996543211111
Q ss_pred -------------------ccccccccEEEEEEecCCeEEEEeCCCeEEEEEccccccccc-cccceeeeeEeeccccce
Q 038568 178 -------------------VNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKE-RKSRHMLVTTLVKHRSTV 237 (357)
Q Consensus 178 -------------------~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~v 237 (357)
+.......|..++......++.-..++.|..|-......... .................|
T Consensus 217 ~~~~~~~~~~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v 296 (423)
T 3mvd_K 217 RSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDI 296 (423)
T ss_dssp TTTTSCSTTTTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSE
T ss_pred cccccccccccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCe
Confidence 001112345555544332344446889999997542211100 000000011111112346
Q ss_pred eEEEEecCCCEEEEEecCCeEEEEecccCCc---------eeeeeeccCCccceEEEeecCceEEEecCCCeEEEeeCCC
Q 038568 238 NALALNGDGSLLFSGGCDRWIVVWERERDHR---------MVFAEALWGHTGALLCLINVGDLLASGSADRTVRIWQRGK 308 (357)
Q Consensus 238 ~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vw~~~~ 308 (357)
..++.. ..+.+.-..||.|+.|-.....+ .........-...|..++......++-..||.|+.|-...
T Consensus 297 ~~ia~G--~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~ 374 (423)
T 3mvd_K 297 RHIAGG--QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGV 374 (423)
T ss_dssp EEEEEC--SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEEEEEETTSCEEEEECCT
T ss_pred EEEEcc--cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeEEEEcCCCCEEEECCCC
Confidence 555543 34555567889999996542211 1111112222226777777666656668899999997654
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.78 E-value=19 Score=35.02 Aligned_cols=35 Identities=11% Similarity=0.058 Sum_probs=28.4
Q ss_pred ceeEEEEecCCCEEEEEecCCeEEEEecccCCcee
Q 038568 236 TVNALALNGDGSLLFSGGCDRWIVVWERERDHRMV 270 (357)
Q Consensus 236 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 270 (357)
.+.+++..++..++++-+.|+++|+|++.++..+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 34556667788899999999999999999886543
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=57.07 E-value=82 Score=26.02 Aligned_cols=171 Identities=9% Similarity=0.038 Sum_probs=88.6
Q ss_pred eEEEEEcCcc--hhhhhccc-----cccccEEEEEEe---cC-----Ce-EEEEeCCCeEEEEEccccccccccc----c
Q 038568 163 SFKIWNASNY--KCLESVNK-----AHEDAVNAVVVS---DN-----GV-VYTGSADGRIRVWERSVVDHNKERK----S 222 (357)
Q Consensus 163 ~i~iwd~~~~--~~~~~~~~-----~~~~~v~~~~~~---~~-----~~-l~~~~~d~~i~i~d~~~~~~~~~~~----~ 222 (357)
.|.+||+++. +.++++.. .....+..+++. |+ +. .++=.....|.++|+...+.-.... .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6788898888 77666521 124568888887 22 23 4444557889999987432211000 0
Q ss_pred ceeeeeEeecc----ccceeEEEEecC----CCEEEEEecCCeEEEEeccc-----CCceeeeeec--cCCccceEEEee
Q 038568 223 RHMLVTTLVKH----RSTVNALALNGD----GSLLFSGGCDRWIVVWERER-----DHRMVFAEAL--WGHTGALLCLIN 287 (357)
Q Consensus 223 ~~~~~~~~~~~----~~~v~~~~~~~~----~~~l~~~~~dg~i~vwd~~~-----~~~~~~~~~~--~~~~~~v~~~~~ 287 (357)
.........+. ...+..|+++|+ ++.|.-....+ -++|.+.+ ......++.+ .+....-..++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 00000111111 246888999997 67777665554 23443321 1110111111 111122233444
Q ss_pred c---CceEEEecCCCeEEEeeCCC-C---cceeeeeeecCCcCceEEEEEeeCCC
Q 038568 288 V---GDLLASGSADRTVRIWQRGK-E---NCYRCMAFLEGHEKPVKSLVAISSSS 335 (357)
Q Consensus 288 ~---~~~l~~~~~dg~i~vw~~~~-~---~~~~~~~~~~~h~~~v~~~~~~~~~~ 335 (357)
+ +.++++--..+.|..|+..+ . +....+..-. .-..+.++.+.+++.
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGG 336 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSC
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCe
Confidence 3 34677777888999999876 2 1122233222 334567777766654
No 362
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=56.07 E-value=84 Score=25.86 Aligned_cols=162 Identities=11% Similarity=0.075 Sum_probs=82.6
Q ss_pred EEEEEEec--CeEEEEecCCeEEEEEcCcchhhh-----------hccccccccEEEEEEecCCeEEEEeCCCeEEEEEc
Q 038568 145 VSDLVVKQ--GLMYSVSWDRSFKIWNASNYKCLE-----------SVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWER 211 (357)
Q Consensus 145 v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~-----------~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~ 211 (357)
+..++... ...+.-..||.|..|-....-.+. .+.......|..++.... ..++-..+|.|..|-.
T Consensus 107 ~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~-hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 107 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGA-HSACVTAAGDLYTWGK 185 (389)
T ss_dssp EEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSS-EEEEEETTSCEEEEEC
T ss_pred eeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcC-eEEEEeCCCeEEEeCC
Confidence 33444444 666677889999999654322111 010011224555554322 4455567899999975
Q ss_pred ccccccccccc--ceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCce---------eeeeeccCCcc
Q 038568 212 SVVDHNKERKS--RHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM---------VFAEALWGHTG 280 (357)
Q Consensus 212 ~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~ 280 (357)
........... ...+..........|..++......+.+.-..||.|+.|-.....++ .+.........
T Consensus 186 n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~ 265 (389)
T 3kci_A 186 GRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 265 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTS
T ss_pred CCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCC
Confidence 42211100000 11111111112234666665443356666678999999965432111 11111111122
Q ss_pred ceEEEeecCceEEEecCCCeEEEeeCC
Q 038568 281 ALLCLINVGDLLASGSADRTVRIWQRG 307 (357)
Q Consensus 281 ~v~~~~~~~~~l~~~~~dg~i~vw~~~ 307 (357)
.|..++......++-..||.|+.|-..
T Consensus 266 ~v~~v~~G~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 266 GVVKVECGSQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred cEEEEeCCCCEEEEEeCCCeEEEEeCC
Confidence 466676666666666789999999764
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=54.45 E-value=80 Score=27.82 Aligned_cols=60 Identities=12% Similarity=0.184 Sum_probs=36.3
Q ss_pred ccEEEEEEecCCeEEEEeCC-------------CeEEEEEccccccccccccceeeeeEeec-cccceeEEEEecCCCEE
Q 038568 184 DAVNAVVVSDNGVVYTGSAD-------------GRIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLL 249 (357)
Q Consensus 184 ~~v~~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 249 (357)
.....|.|.++|.|..+... ..+..++.. ..+....+.. ....++.++|+||++.|
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~----------tGel~~fl~~P~~aEpnGiafSPD~ktL 545 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA----------TGEIRRFMVGPIGCEVTGISFSPDQKTL 545 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTT----------TCCEEEEEECCTTCEEEEEEECTTSSEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCC----------CCeEEEEEeCCCCccccCCEECCCCCEE
Confidence 44677899999865543221 145555443 2222222332 24578999999999988
Q ss_pred EEEe
Q 038568 250 FSGG 253 (357)
Q Consensus 250 ~~~~ 253 (357)
++.-
T Consensus 546 fV~v 549 (592)
T 4a9v_A 546 FVGI 549 (592)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.37 E-value=1.7e+02 Score=28.40 Aligned_cols=27 Identities=26% Similarity=0.299 Sum_probs=21.0
Q ss_pred ceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEecC
Q 038568 324 PVKSLVAISSSSSASNGIVSIGSGSLNGEIKVWD 357 (357)
Q Consensus 324 ~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~wd 357 (357)
.+.+++..++.. ++++-+.|+++|+||
T Consensus 239 ~~vs~~~~~~~~-------~lftL~~D~~LRiWs 265 (1139)
T 4fhn_B 239 TIISMIFLSTYN-------VLVMLSLDYKLKVLD 265 (1139)
T ss_dssp CBSCCEEETTTT-------EEEEEBTTCEEEEEE
T ss_pred eeEEeeccCCcc-------EEEEEeCCCEEEEEE
Confidence 344555666666 899999999999996
No 365
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=48.92 E-value=1.1e+02 Score=25.21 Aligned_cols=118 Identities=10% Similarity=0.215 Sum_probs=60.7
Q ss_pred ccEEEEEEe---------cCeEE-EEecCCeEEEEEcCcchhhhhcc----cc-------------ccccEEEEEEecC-
Q 038568 143 DAVSDLVVK---------QGLMY-SVSWDRSFKIWNASNYKCLESVN----KA-------------HEDAVNAVVVSDN- 194 (357)
Q Consensus 143 ~~v~~~~~~---------~~~l~-~~~~dg~i~iwd~~~~~~~~~~~----~~-------------~~~~v~~~~~~~~- 194 (357)
+.+..+.+. ..+++ +=+..+.|.++|+.+++..+... .. -...+..|+.+|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456666666 12223 33346789999998766433220 00 0246778888886
Q ss_pred ---C-eEEEEe-CCCeEEEEEccccccccccccceeeeeEeeccc---cceeEEEEe-cCCCEEEEEecCCeEEEEeccc
Q 038568 195 ---G-VVYTGS-ADGRIRVWERSVVDHNKERKSRHMLVTTLVKHR---STVNALALN-GDGSLLFSGGCDRWIVVWERER 265 (357)
Q Consensus 195 ---~-~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~-~~~~~l~~~~~dg~i~vwd~~~ 265 (357)
+ .|.-.. ....+.-...+...... ....+..+ +.. ..-..++++ .+|.++++--..+.|..|+..+
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~----~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKG----GKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTT----CCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcc----hhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 4 233333 32234333322111100 01111111 122 233456776 5777777777888999999875
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=48.04 E-value=1.1e+02 Score=24.66 Aligned_cols=168 Identities=10% Similarity=0.068 Sum_probs=90.0
Q ss_pred CCCceEEEEEec----Cc-eEEeecCCeEEEEecCCccceee--eeecCccccceeeeecCCCeEEEecccccccccccc
Q 038568 71 SSGSVKSITFHI----TK-IFTAHQDCKIRVWKITASRQHQL--VSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWD 143 (357)
Q Consensus 71 ~~~~v~~l~~~~----~~-l~~~~~d~~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (357)
....|.++...+ +. ++.++.+|.++.-.+..-..... ...+ .+.. .+
T Consensus 93 ~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i-------------------------~lke-~D 146 (327)
T 3uc1_A 93 PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAV-------------------------NLRD-ND 146 (327)
T ss_dssp TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESC-------------------------BCCT-TC
T ss_pred CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEE-------------------------EECC-CC
Confidence 455666665443 22 99999999999988765332111 0000 0012 23
Q ss_pred cEEEEEEe-c-CeEEEEecCCeEEEEEcC--cchhhh-------hccccccccEEEEEEecC-CeEEEEeCCCeEEEEEc
Q 038568 144 AVSDLVVK-Q-GLMYSVSWDRSFKIWNAS--NYKCLE-------SVNKAHEDAVNAVVVSDN-GVVYTGSADGRIRVWER 211 (357)
Q Consensus 144 ~v~~~~~~-~-~~l~~~~~dg~i~iwd~~--~~~~~~-------~~~~~~~~~v~~~~~~~~-~~l~~~~~d~~i~i~d~ 211 (357)
.+..+... . ..++..+..|.+..+... .-.... .+.......|.++...++ ..++..+..|.++.-.+
T Consensus 147 ~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 147 ELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 34444333 3 778888889998888776 211110 111133455666655544 47889999999998887
Q ss_pred cccccccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEEEeccc
Q 038568 212 SVVDHNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERER 265 (357)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 265 (357)
......... ........+......+..+....+...++..+.+|.+.-++...
T Consensus 227 ~e~~~~~R~-~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 227 EEYPVQGRG-GKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp GGSCBCCTT-SCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred HHccccCcC-CCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 632221110 01122222222123344444434445666677777777776653
No 367
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=43.54 E-value=2e+02 Score=26.56 Aligned_cols=157 Identities=10% Similarity=0.071 Sum_probs=0.0
Q ss_pred cccEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeec----cccceeEEEEec-CCCEEEEEecC
Q 038568 183 EDAVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK----HRSTVNALALNG-DGSLLFSGGCD 255 (357)
Q Consensus 183 ~~~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~d 255 (357)
...|.+|+++|.. .++++...+.|...+ ......+.+..... ....+.+|+++| +.+.++++..+
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~--------DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~ 85 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD--------AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGR 85 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE--------TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec--------CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCc
Q ss_pred Ce----EEEEecccCCceeeeeeccCCcc-------ceEEEeecCc---eEEEecCCCeEEEeeCCCCcceeeeeeec--
Q 038568 256 RW----IVVWERERDHRMVFAEALWGHTG-------ALLCLINVGD---LLASGSADRTVRIWQRGKENCYRCMAFLE-- 319 (357)
Q Consensus 256 g~----i~vwd~~~~~~~~~~~~~~~~~~-------~v~~~~~~~~---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-- 319 (357)
.. -.||....+.............. .+..+++++. .++.+...+.|. .....++.++.+....
T Consensus 86 ~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 86 YVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp CTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCC
T ss_pred cCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccc
Q ss_pred -CCcCceEEEEEee-CCCCCCCCeEEEEEcCCC-CeEEe
Q 038568 320 -GHEKPVKSLVAIS-SSSSASNGIVSIGSGSLN-GEIKV 355 (357)
Q Consensus 320 -~h~~~v~~~~~~~-~~~~~~~~~~~l~s~~~d-g~v~~ 355 (357)
.....+..+.++| +.. .+..+..+ +.|..
T Consensus 165 ~~~~~~~~~i~~~p~~~~-------~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNG-------TIYASATAPQGMYV 196 (789)
T ss_dssp CSTTTCEEEEEECTTSTT-------CEEEEESSTTCEEE
T ss_pred cCCCCCeEEEEECCCCCC-------EEEEEEcCCCeEEE
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=41.31 E-value=1.1e+02 Score=27.02 Aligned_cols=58 Identities=12% Similarity=0.201 Sum_probs=34.9
Q ss_pred cEEEEEEecCCeEEEEeCCC-------------eEEEEEccccccccccccceeeeeEeec-cccceeEEEEecCCCEEE
Q 038568 185 AVNAVVVSDNGVVYTGSADG-------------RIRVWERSVVDHNKERKSRHMLVTTLVK-HRSTVNALALNGDGSLLF 250 (357)
Q Consensus 185 ~v~~~~~~~~~~l~~~~~d~-------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~ 250 (357)
..--|+|+|.|.|..+...+ .+.+.+.. ..+..+.+.. ....++.++|+||++.|+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~----------~g~~~rf~~~P~gaE~TG~~fspDg~tlf 546 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPA----------TGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTT----------TCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCC----------CCeEEEEEeCCCCccCcCeeECCCCCEEE
Confidence 34568899999766554322 23333332 2222222322 357899999999998887
Q ss_pred EE
Q 038568 251 SG 252 (357)
Q Consensus 251 ~~ 252 (357)
+.
T Consensus 547 vn 548 (592)
T 3zwu_A 547 VG 548 (592)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=38.32 E-value=1.5e+02 Score=23.73 Aligned_cols=193 Identities=12% Similarity=0.072 Sum_probs=100.0
Q ss_pred CeEEEEecCCeEEEEEcCcchhh-------hhccccccccEEEEE-EecCCeEEEEeCCCeEEEEEccccccccccccce
Q 038568 153 GLMYSVSWDRSFKIWNASNYKCL-------ESVNKAHEDAVNAVV-VSDNGVVYTGSADGRIRVWERSVVDHNKERKSRH 224 (357)
Q Consensus 153 ~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~v~~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 224 (357)
..+++.+.+|.|+--.+.+.+.. ........+.+..+. .+....++.-+..|.++-......... .....+
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~-~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEA-SRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBC-CSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCC-CccCCC
Confidence 46788899999998776543322 111112233444433 344446777777888776654311110 001122
Q ss_pred eeeeE---eeccccceeEEE-Eec--CCCEEEEEecCCeEEEEecccCCcee----eeeeccCCccceEEEeec-CceEE
Q 038568 225 MLVTT---LVKHRSTVNALA-LNG--DGSLLFSGGCDRWIVVWERERDHRMV----FAEALWGHTGALLCLINV-GDLLA 293 (357)
Q Consensus 225 ~~~~~---~~~~~~~v~~~~-~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~v~~~~~~-~~~l~ 293 (357)
.++.. +. ....|..+. +.+ +..+++..+.+|.|+--.+..-.... ....+.....-+..+... .+.|+
T Consensus 83 ~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 83 QHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred EEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 22211 22 233454443 332 56799999999999998876432110 111222222223222222 34788
Q ss_pred EecCCCeEEEeeCC--CCc------ceeeeeeecCCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 294 SGSADRTVRIWQRG--KEN------CYRCMAFLEGHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 294 ~~~~dg~i~vw~~~--~~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
..+..|.+..+... .-. .....-.+. ..+.|.++...+.+. .|+..+..|.++.
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~-------~ll~~T~~G~~Kr 223 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGT-------YLLVATSGGYAKR 223 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTC-------EEEEEETTSEEEE
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCC-------EEEEEeCCCcEEE
Confidence 88888988888776 211 011111222 245577776665554 6777777887753
No 370
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=35.71 E-value=1.8e+02 Score=23.76 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=35.7
Q ss_pred ccEEEEEEec---CeEEEEecCC----eEEEEEcCcchhhhhcc-----cc--------ccccEEEEEEec---CCeEEE
Q 038568 143 DAVSDLVVKQ---GLMYSVSWDR----SFKIWNASNYKCLESVN-----KA--------HEDAVNAVVVSD---NGVVYT 199 (357)
Q Consensus 143 ~~v~~~~~~~---~~l~~~~~dg----~i~iwd~~~~~~~~~~~-----~~--------~~~~v~~~~~~~---~~~l~~ 199 (357)
..|.+|++.| ..+..+...| .|...+ ..++.-..+. .. ....|.++++.| .+.+.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4688999986 5666666655 444432 2222111110 00 112577888886 346777
Q ss_pred EeCCCeEEEE
Q 038568 200 GSADGRIRVW 209 (357)
Q Consensus 200 ~~~d~~i~i~ 209 (357)
+...+.|...
T Consensus 134 g~~~ggl~~S 143 (394)
T 3b7f_A 134 GTSPQGLFRS 143 (394)
T ss_dssp EEETTEEEEE
T ss_pred EecCCcEEEE
Confidence 6666665544
No 371
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=35.48 E-value=1.7e+02 Score=25.57 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=41.1
Q ss_pred EEEEEEecCC---eEEEEeCCCeEEEEEccccccccccccceeeeeEe--ecccccee-EEEEecCCCEEEEEecCCeEE
Q 038568 186 VNAVVVSDNG---VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTL--VKHRSTVN-ALALNGDGSLLFSGGCDRWIV 259 (357)
Q Consensus 186 v~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~ 259 (357)
.++++....+ .++.|..+|.|.-..+.. ..........+ .....+|. .|.++++..+|++++.++.++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~------~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADG------PPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTR 475 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEE------TTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCC------CCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccce
Confidence 4555555433 378888999887655431 10010112222 22346775 899999999999998776554
Q ss_pred E
Q 038568 260 V 260 (357)
Q Consensus 260 v 260 (357)
|
T Consensus 476 v 476 (539)
T 3al9_A 476 V 476 (539)
T ss_dssp E
T ss_pred e
Confidence 4
No 372
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=35.39 E-value=1.6e+02 Score=22.94 Aligned_cols=164 Identities=7% Similarity=0.007 Sum_probs=88.3
Q ss_pred CCCceEEEEEe--cCc-eEEeecCCeEEEEecCCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEE
Q 038568 71 SSGSVKSITFH--ITK-IFTAHQDCKIRVWKITASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSD 147 (357)
Q Consensus 71 ~~~~v~~l~~~--~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 147 (357)
....|..+... ++. ++..+.+|.++-..+..-. ... . . ... -.+ ...+.+..
T Consensus 66 ~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~-~---G---~~~----------------i~l-kegD~l~~ 120 (276)
T 3no0_A 66 REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKA-Q---G---MPI----------------IKL-TEGDEVVS 120 (276)
T ss_dssp TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCS-T---T---EEC----------------SCC-CTTCCEEE
T ss_pred CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhc-C---C---eEE----------------Eec-CCCCEEEE
Confidence 55667766442 223 8899999999999876432 100 0 0 000 000 11234444
Q ss_pred EEEec--CeEEEEecCCeEEEEEcCcch---------hhhhccccccccEEEEEEec-CCeEEEEeCCCeEEEEEccccc
Q 038568 148 LVVKQ--GLMYSVSWDRSFKIWNASNYK---------CLESVNKAHEDAVNAVVVSD-NGVVYTGSADGRIRVWERSVVD 215 (357)
Q Consensus 148 ~~~~~--~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~ 215 (357)
+.... ..++..+..|.+..++...-. ....+ .....|..+...+ +..++..+..|.++...+....
T Consensus 121 ~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L--~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~ 198 (276)
T 3no0_A 121 IASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKL--EKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIP 198 (276)
T ss_dssp EEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC--CTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSC
T ss_pred EEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEcc--CCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcc
Confidence 43333 678888899998888754311 11122 2334555555444 4478888999999998876332
Q ss_pred cccccccceeeeeEeeccccceeEEEEecCCCEEEEEecCCeEEE--Eeccc
Q 038568 216 HNKERKSRHMLVTTLVKHRSTVNALALNGDGSLLFSGGCDRWIVV--WERER 265 (357)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v--wd~~~ 265 (357)
..... .+-...+ ...+.+..+....+...++..+.+|.+.. ++...
T Consensus 199 ~~~R~---gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 199 KTNRG---VKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp CCCTT---CCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred cCCCC---CcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 21111 1111111 22334444433333446667777888777 77653
No 373
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=33.80 E-value=1.7e+02 Score=22.78 Aligned_cols=153 Identities=13% Similarity=0.087 Sum_probs=85.5
Q ss_pred CeEEEEecCCeEEEEEcCcch----hhhhccccccccEEEEEEe-cCCeEEEEeCCCeEEEEEccccccccccccceeee
Q 038568 153 GLMYSVSWDRSFKIWNASNYK----CLESVNKAHEDAVNAVVVS-DNGVVYTGSADGRIRVWERSVVDHNKERKSRHMLV 227 (357)
Q Consensus 153 ~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 227 (357)
..++..+.+|.++-..+.... -+..+.....+.+..+... .+..++..+..|.+..++........ ....+...
T Consensus 81 ~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~g-R~a~Gv~~ 159 (276)
T 3no0_A 81 NRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPST-PGARGVQG 159 (276)
T ss_dssp SEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCC-TTCCCEEC
T ss_pred CEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcC-CCCCCEEE
Confidence 689999999999999876543 0111111223445444443 33468888999999888865322110 11122222
Q ss_pred eEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCcee----eeeeccCCccceEEEe-ecCc-eEEEecCCCeE
Q 038568 228 TTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRMV----FAEALWGHTGALLCLI-NVGD-LLASGSADRTV 301 (357)
Q Consensus 228 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~~~~~~~~v~~~~-~~~~-~l~~~~~dg~i 301 (357)
..+.. ...|..+...+++..++..+..|.++...+..-.... -...+ .....+..+. ..++ .++..+.+|.+
T Consensus 160 i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ 237 (276)
T 3no0_A 160 IKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKA 237 (276)
T ss_dssp CCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCE
T ss_pred EccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeE
Confidence 23332 3456666555666788899999999988875322100 01111 1223343332 2333 66777778877
Q ss_pred EE--eeCCC
Q 038568 302 RI--WQRGK 308 (357)
Q Consensus 302 ~v--w~~~~ 308 (357)
.. ++...
T Consensus 238 ir~~~~~~~ 246 (276)
T 3no0_A 238 FYDKINQKD 246 (276)
T ss_dssp EEEEEEGGG
T ss_pred EEeeeCHHH
Confidence 77 77653
No 374
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=33.67 E-value=1.7e+02 Score=26.34 Aligned_cols=61 Identities=15% Similarity=0.274 Sum_probs=36.0
Q ss_pred EEEEeCCCeEE-EEEccccccccccccceeeeeEe--eccccceeEEEEecCCCEEEEEecCCeEEE
Q 038568 197 VYTGSADGRIR-VWERSVVDHNKERKSRHMLVTTL--VKHRSTVNALALNGDGSLLFSGGCDRWIVV 260 (357)
Q Consensus 197 l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 260 (357)
++.|..+|.|. +.-...... .......+.++ .....+|..|.++++...|++++.++.++|
T Consensus 432 lFLGT~~G~I~Kvv~~~~~~~---~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 432 MFIGTDVGTVLKVVSVPKETW---HDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEETTSEEEEEEEEC---------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEECCCCeEEEEEEcCCCCc---cccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 77888999875 322210000 00011122222 234567899999999999999998886555
No 375
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=33.29 E-value=2e+02 Score=23.51 Aligned_cols=53 Identities=8% Similarity=0.018 Sum_probs=27.1
Q ss_pred cceEEEeeCCceEEEeccCCccccceeccccCCCCceEEEEEec--Cc-eEEeecCC
Q 038568 39 NSLLYAASLNEINVFDLISDYSHVDTFSNDLSSSGSVKSITFHI--TK-IFTAHQDC 92 (357)
Q Consensus 39 ~~~l~t~~~d~i~iw~~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-l~~~~~d~ 92 (357)
...|..|...-+.+++....+.....+.. ......|.+|++.| .. |..++..|
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEEEecCC
Confidence 34666676654444443122222222210 01446799999997 33 76666655
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=33.22 E-value=2.4e+02 Score=24.35 Aligned_cols=74 Identities=15% Similarity=0.272 Sum_probs=42.3
Q ss_pred cEEEEEEec----CC-e--EEEEeCCCeEEEEEccccccccccccceeeeeEee--ccccceeEEEEecCCCEEEEEecC
Q 038568 185 AVNAVVVSD----NG-V--VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLV--KHRSTVNALALNGDGSLLFSGGCD 255 (357)
Q Consensus 185 ~v~~~~~~~----~~-~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 255 (357)
..++|+... ++ + ++.|..+|.|.=.-+..... ........+.++. ....+|..|.++++..+|++++.+
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~--~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~ 482 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKET--WHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTA 482 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-------------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSS
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCC--ccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECC
Confidence 356776653 24 2 78889999875443320000 0000111222222 235789999999999999999988
Q ss_pred CeEEE
Q 038568 256 RWIVV 260 (357)
Q Consensus 256 g~i~v 260 (357)
+.++|
T Consensus 483 ~V~~v 487 (495)
T 1q47_A 483 GVAQL 487 (495)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 76554
No 377
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=31.83 E-value=3e+02 Score=25.12 Aligned_cols=61 Identities=15% Similarity=0.268 Sum_probs=34.5
Q ss_pred cEEEEEEecCC--eEEEEeCCCeEEEEEccccccccccccceeeeeEeec----cccceeEEEEec-CCCEEEEEe
Q 038568 185 AVNAVVVSDNG--VVYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVK----HRSTVNALALNG-DGSLLFSGG 253 (357)
Q Consensus 185 ~v~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~ 253 (357)
.|..|+++|.. .++++...+.|...+-. ....+.+..... ....|.+|+++| +.+.++++.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~--------G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~ 91 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPS--------TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVA 91 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETT--------TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEE
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCC--------CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEe
Confidence 78899999874 67777766666555421 122232221111 124588999998 334444443
No 378
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=31.75 E-value=1.9e+02 Score=26.02 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=36.4
Q ss_pred eEEEecCCCeEEEe-eCCCCcceeeeeeec--CCcCceEEEEEeeCC--CCCCCCeEEEEEcCCCCeEEe
Q 038568 291 LLASGSADRTVRIW-QRGKENCYRCMAFLE--GHEKPVKSLVAISSS--SSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 291 ~l~~~~~dg~i~vw-~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~--~~~~~~~~~l~s~~~dg~v~~ 355 (357)
.+..|..+|.|.=. ..... ...+.... ....+|..|.++++. . +|..++.++.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~--~~~~ee~~~~~~~~pI~~l~l~~~~~~~-------~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHA--VHIIEETQLFQDFEPVQTLLLSSKKGNR-------FVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSS--EEEEEEEECCTTCCCCCEEEECCSSSSC-------EEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCC--ceEEEEecccCCCCcceeeEeccCCCcc-------EEEEEEcCeEEEE
Confidence 77888899977543 33332 12222222 245789999999886 6 8888888877664
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=27.15 E-value=2.1e+02 Score=24.65 Aligned_cols=58 Identities=10% Similarity=0.031 Sum_probs=37.2
Q ss_pred eEEEecCCCeEEEeeCCCCc-----ceeeeeeecC--CcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 291 LLASGSADRTVRIWQRGKEN-----CYRCMAFLEG--HEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 291 ~l~~~~~dg~i~vw~~~~~~-----~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
.+..|..+|.|.=.-+.... ....+..+.. ...+|..|.++++.. +|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~-------~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ-------QLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT-------EEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCC-------EEEEEECCeEEEE
Confidence 67888889877544332211 0112333332 357999999999987 8888888887765
No 380
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=24.65 E-value=98 Score=22.34 Aligned_cols=34 Identities=9% Similarity=0.171 Sum_probs=27.0
Q ss_pred CCCceEEEEEecCc---eEEeecCCeEEEEecCCccc
Q 038568 71 SSGSVKSITFHITK---IFTAHQDCKIRVWKITASRQ 104 (357)
Q Consensus 71 ~~~~v~~l~~~~~~---l~~~~~d~~i~vwd~~~~~~ 104 (357)
....+.++.|.+.. +++.+.++++.++|.+-++.
T Consensus 117 g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 117 GRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred CCceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 45667778887765 88888899999999988764
No 381
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=23.23 E-value=3.5e+02 Score=23.56 Aligned_cols=69 Identities=17% Similarity=0.216 Sum_probs=40.4
Q ss_pred EEEEEEec-CCe--EEEEeCCCeEEEEEccccccccccccceeeeeEeeccccce-eEEEEecCCCEEEEEecCCeEEE
Q 038568 186 VNAVVVSD-NGV--VYTGSADGRIRVWERSVVDHNKERKSRHMLVTTLVKHRSTV-NALALNGDGSLLFSGGCDRWIVV 260 (357)
Q Consensus 186 v~~~~~~~-~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~v 260 (357)
.++|+... +++ ++.|..+|.|.-.-+... ......+.+ .+ ....+| ..|.++++...|++++..+.++|
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~----~~~~~~ee~-~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPG----SDGHPYSTQ-SI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSS----CCSCCSEEE-ES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCC----CCeeEEeee-cc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 45555543 343 777888998874443210 000011111 12 344577 48999999899999988886665
No 382
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=22.27 E-value=3.3e+02 Score=24.59 Aligned_cols=55 Identities=9% Similarity=0.221 Sum_probs=34.9
Q ss_pred EEEEeCCCeEEEE-EccccccccccccceeeeeEe--eccccceeEEEEecCC--CEEEEEecCCeEEE
Q 038568 197 VYTGSADGRIRVW-ERSVVDHNKERKSRHMLVTTL--VKHRSTVNALALNGDG--SLLFSGGCDRWIVV 260 (357)
Q Consensus 197 l~~~~~d~~i~i~-d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~v 260 (357)
++.|..+|.|.=. ... . ....+... .....+|..|.++++. .+|++++.++.++|
T Consensus 418 ~flGT~~G~l~Kvv~~~------~---~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 418 MFVSTDRGALHKAISLE------H---AVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEETTSEEEEEEECS------S---SEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEcCCcEEEEEEecC------C---CceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 7788888887533 322 1 11122222 1235688899999987 89999888776555
No 383
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.61 E-value=1.7e+02 Score=18.84 Aligned_cols=58 Identities=7% Similarity=-0.024 Sum_probs=25.8
Q ss_pred CeEEEEecCCeEEEEEcCcchhhhhccccccccEEEEEEecCCeEEEEeCCCeEEEEEc
Q 038568 153 GLMYSVSWDRSFKIWNASNYKCLESVNKAHEDAVNAVVVSDNGVVYTGSADGRIRVWER 211 (357)
Q Consensus 153 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~ 211 (357)
.+.+.-..||.+.+|+...+..+..-.......-..+.+..+|.|+.-..++.+ +|.-
T Consensus 25 ~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S 82 (113)
T 3mez_B 25 DYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVS 82 (113)
T ss_dssp TEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEEC
T ss_pred CEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEEC
Confidence 444444567777777653222222220111111234555666654444444443 5654
No 384
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=21.16 E-value=1.2e+02 Score=21.85 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=26.5
Q ss_pred cccccEEEEEEec---CeEEEEecCCeEEEEEcCcch
Q 038568 140 EHWDAVSDLVVKQ---GLMYSVSWDRSFKIWNASNYK 173 (357)
Q Consensus 140 ~~~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~~~~ 173 (357)
.....+.++.|.+ ..+++...+|++.++|.+-|+
T Consensus 116 ~g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 116 SGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp TTCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CCCceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 4456677788877 567777889999999998665
No 385
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=20.70 E-value=4.2e+02 Score=23.53 Aligned_cols=58 Identities=9% Similarity=-0.035 Sum_probs=37.3
Q ss_pred eEEEecCCCeEEEeeCCCCcc---eeeeeeec--CCcCceEEEEEeeCCCCCCCCeEEEEEcCCCCeEEe
Q 038568 291 LLASGSADRTVRIWQRGKENC---YRCMAFLE--GHEKPVKSLVAISSSSSASNGIVSIGSGSLNGEIKV 355 (357)
Q Consensus 291 ~l~~~~~dg~i~vw~~~~~~~---~~~~~~~~--~h~~~v~~~~~~~~~~~~~~~~~~l~s~~~dg~v~~ 355 (357)
.+..|.++|.|.-.-+..... ...+..+. ....+|..+.++++.. .|..++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~-------~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERR-------KLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTT-------EEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCC-------EEEEEecceEEEc
Confidence 677888888876443332110 11222232 3467899999999887 8888888877765
No 386
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=20.03 E-value=3.7e+02 Score=22.14 Aligned_cols=256 Identities=9% Similarity=0.027 Sum_probs=126.2
Q ss_pred cceeEEEEecceEEEeeCC-ceEEEeccCCccccc-------e-eccccCCCCceEEEEEecCceEEeecCCeEEEEec-
Q 038568 30 MIISCLAVHNSLLYAASLN-EINVFDLISDYSHVD-------T-FSNDLSSSGSVKSITFHITKIFTAHQDCKIRVWKI- 99 (357)
Q Consensus 30 ~~i~~~~~s~~~l~t~~~d-~i~iw~~~~~~~~~~-------~-~~~~~~~~~~v~~l~~~~~~l~~~~~d~~i~vwd~- 99 (357)
..|..++......+.-..| .|+.|-....+++-. . ..........|..++--.+..+.-..||.|..|-.
T Consensus 59 ~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~l~~~i~~va~G~~hs~alt~~G~v~~wG~~ 138 (413)
T 1a12_A 59 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSF 138 (413)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECE
T ss_pred CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCeEecCCCcEEEEecCCCeEEEEcCCCcEEEeeCC
Confidence 3466666654455555567 999997622222100 0 00000023467777766666666678899999975
Q ss_pred -CCccceeeeeecCccccceeeeecCCCeEEEecccccccccccccEEEEEEecCeEEEEecCCeEEEEEcCcchhhhh-
Q 038568 100 -TASRQHQLVSTLPTVKDRLIRSVLPNNYVTVRRHKKRLWLEHWDAVSDLVVKQGLMYSVSWDRSFKIWNASNYKCLES- 177 (357)
Q Consensus 100 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~- 177 (357)
+...++-.-.. ... ... | ..+ .....|..++.-....+.-..||.|..|-....-.+..
T Consensus 139 ~n~~GqlG~~~~---~~~-~~~---P----------~~v--~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~ 199 (413)
T 1a12_A 139 RDNNGVIGLLEP---MKK-SMV---P----------VQV--QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRV 199 (413)
T ss_dssp EETTEEEESSBB---TBC-EEE---E----------EEE--CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSC
T ss_pred cCCCCccCcCCc---ccc-ccC---C----------EEe--cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCC
Confidence 22111100000 000 000 0 000 12346777777776677777899999997543211100
Q ss_pred ----------------cc----cc------ccccEEEEEEecCCeEEEEeCCCeEEEEEcccccccccccc--ceee--e
Q 038568 178 ----------------VN----KA------HEDAVNAVVVSDNGVVYTGSADGRIRVWERSVVDHNKERKS--RHML--V 227 (357)
Q Consensus 178 ----------------~~----~~------~~~~v~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~--~ 227 (357)
+. .. ....|..++.... ..++-..+|.|+.|-............ ...+ +
T Consensus 200 ~~~~~~~~~~~~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~-hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v 278 (413)
T 1a12_A 200 PELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY-FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNL 278 (413)
T ss_dssp GGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETT-EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEEC
T ss_pred ccccccccccccccccccCceEeeccccccCCccEEEEEeCCC-EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEc
Confidence 00 00 2234666655443 333445789999997652211100000 0111 1
Q ss_pred eEeeccccceeEEEEecCCCEEEEEecCCeEEEEecccCCce---------eeeeeccCCccceEEEeecCceEEEecCC
Q 038568 228 TTLVKHRSTVNALALNGDGSLLFSGGCDRWIVVWERERDHRM---------VFAEALWGHTGALLCLINVGDLLASGSAD 298 (357)
Q Consensus 228 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 298 (357)
..+......|..++.. ....+.-..||.|+.|-.....++ .....+. ....|..++......++-..|
T Consensus 279 ~~l~~~~~~v~~ia~G--~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P~~v~-~l~~v~~v~~G~~hs~alt~~ 355 (413)
T 1a12_A 279 TSFKNSTKSWVGFSGG--QHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS-RLPAVSSVACGASVGYAVTKD 355 (413)
T ss_dssp GGGCCTTCCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEEEECC-SSSSEEEEEECSSEEEEEETT
T ss_pred hhccCCCceEEEEecc--cceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCCEEec-ccCceeEEEECcceEEEEeCC
Confidence 1111111235555543 335555567899999965431110 0111111 112577777766666666789
Q ss_pred CeEEEeeCCC
Q 038568 299 RTVRIWQRGK 308 (357)
Q Consensus 299 g~i~vw~~~~ 308 (357)
|.|+.|-...
T Consensus 356 G~v~~wG~n~ 365 (413)
T 1a12_A 356 GRVFAWGMGT 365 (413)
T ss_dssp SCEEEEECCT
T ss_pred CCEEEecCCC
Confidence 9999997653
Done!