BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038569
(362 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6
PE=1 SV=1
Length = 327
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 217/290 (74%), Gaps = 12/290 (4%)
Query: 67 NISAVYGSEPEQMGSGNNSSSSSDAASSLMVAVAEIQRNNTTSSEEQVSSAIRAQIASHP 126
+S V+GS+ ++ S S+ SS+AAS EI+RN+ S + I+A+IA HP
Sbjct: 44 RVSDVFGSD--ELLSVAVSALSSEAAS----IAPEIRRNDDNVS----LTVIKAKIACHP 93
Query: 127 LYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADPELDEFMETYC 186
YP+LLQAYIDCQKVGA PEIA +L++I+RE DV + VV S C+GADPELDEFMETYC
Sbjct: 94 SYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQE-VVPSSCFGADPELDEFMETYC 152
Query: 187 DILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDEADPGGSWEEDLSGGETE 246
DILVKYKSDL++P+DEA+ FLN +E QL NLC V + G E D S +E+LSGG+ E
Sbjct: 153 DILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSE-DGVISSDEELSGGDHE 211
Query: 247 VSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNW 306
V+E R DR+ KD L+RK+G ISTLK EFSKKKKKGKLP+EARQ L DWWNLHY W
Sbjct: 212 VAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKW 271
Query: 307 PYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMDSVCG 356
PYPTE DK+ALA++TGLDQ+QINNWFINQRKRHWKPSE++ F +MD G
Sbjct: 272 PYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSG 321
>sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2
PE=1 SV=3
Length = 310
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/238 (61%), Positives = 185/238 (77%), Gaps = 4/238 (1%)
Query: 116 SAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGAD 175
S I+++IASHPLYP+LLQ YIDCQKVGA EIA +L++I+RE V R+ V C+GAD
Sbjct: 67 SVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRD-VAPLSCFGAD 125
Query: 176 PELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCN-VVSRSHGSDEADPGG 234
PELDEFMETYCDILVKYK+DL++P+DEA++F+N +E QL NLC S + SD D
Sbjct: 126 PELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATALSD--DGAV 183
Query: 235 SWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQ 294
S +E+L + ++ + DR+ KD L+RK+G +IS+LK EFSKKKKKGKLP+EARQ
Sbjct: 184 SSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQ 243
Query: 295 ILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMD 352
L DWWN+H WPYPTE DK++LAE TGLDQ+QINNWFINQRKRHWKPSE++ F++MD
Sbjct: 244 ALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMD 301
>sp|P46639|KNAT1_ARATH Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana GN=KNAT1
PE=1 SV=1
Length = 398
Score = 253 bits (645), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/301 (47%), Positives = 200/301 (66%), Gaps = 18/301 (5%)
Query: 72 YGSEPEQMGSGNNSSSSSDAASSLMVAVAEIQR--NNTTSSEEQVSS------AIRAQIA 123
+ S+ +Q + NN S S+A+SS + + + R +NT + + A++A+I
Sbjct: 80 FRSDHDQPNNNNNPSVKSEASSSRINHYSMLMRAIHNTQEANNNNNDNVSDVEAMKAKII 139
Query: 124 SHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADPELDEFME 183
+HP Y LLQAY+DCQK+GA P++ + + R++ + + S DPELD+FME
Sbjct: 140 AHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPELDQFME 199
Query: 184 TYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLC----NVVSRSHG-SDEADPGGSWEE 238
YCD+LVKY+ +L++P EA F+ +E+QLS LC ++++ G SD +E
Sbjct: 200 AYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQE 259
Query: 239 DLSGGETEVSECFRMPPV--DRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQIL 296
+ SGGETE+ E + P DRE K++L++KY GY+S+LK E SKKKKKGKLPKEARQ L
Sbjct: 260 NNSGGETELPE---IDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKL 316
Query: 297 FDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMDSVCG 356
WW LHY WPYP+E++KVALAESTGLDQ+QINNWFINQRKRHWKPSE +QF +MD +
Sbjct: 317 LTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQH 376
Query: 357 P 357
P
Sbjct: 377 P 377
>sp|Q41330|KN1_SOLLC Homeotic protein knotted-1 OS=Solanum lycopersicum GN=KN1 PE=2 SV=1
Length = 355
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 208/334 (62%), Gaps = 20/334 (5%)
Query: 37 QNNNNNNNNNNDDDDDDDNIEAYGGEHEIGNISAVYGS-----EPEQMGSGNNSSSSSDA 91
+NNN NN+ + ++ YGG +G + +YG +P + + S+S
Sbjct: 2 ENNNYNNHVSGENSGGQRGHFFYGGNQVLGGAAPIYGRGGDCYDPMIVKTEGGGSTSHHN 61
Query: 92 ASSLMVAVAEIQRNNTT------SSEEQVSSAIRAQIASHPLYPKLLQAYIDCQKVGASP 145
+ ++ +++T + +V A++A+I +HP LL AY+DCQKVGA P
Sbjct: 62 HTFHYPSIIRNHHHDSTETSGGGAGAGEVIEALKAKIIAHPQCSNLLDAYMDCQKVGAPP 121
Query: 146 EIANVLDDIRREGDVSNRNWVVSSCCWGADPELDEFMETYCDILVKYKSDLSKPYDEASS 205
E+A L +R+E + R + DPELD+FME Y D+LVKY+ +L++P EA
Sbjct: 122 EVAARLSAVRQEFEARQRRSLTDRDV-SKDPELDQFMEAYYDMLVKYREELTRPLQEAME 180
Query: 206 FLNNMETQLSNLCNVVSRSHGSDEADPG-GSWEEDL--SGGETEVSECFRMPPV--DRET 260
F+ +E QL+ L N R S++ G GS EED SGGETE+ E + P DRE
Sbjct: 181 FMQKIEAQLNMLGNAPVRIFNSEDKCEGVGSSEEDQDNSGGETELPE---IDPRAEDREL 237
Query: 261 KDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAES 320
K++L+RKY GY+S+LK E SKKKKKGKLPK+ARQ L WW LHY WPYP+E++KVALAES
Sbjct: 238 KNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVALAES 297
Query: 321 TGLDQRQINNWFINQRKRHWKPSESVQFNLMDSV 354
TGLDQ+QINNWFINQRKRHWKPSE +QF +MD +
Sbjct: 298 TGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGL 331
>sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare GN=KNOX3 PE=1 SV=1
Length = 364
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/285 (49%), Positives = 187/285 (65%), Gaps = 17/285 (5%)
Query: 80 GSGNNSSSSSDAASSLMVAVAEIQRNNTTSSEEQVSSAIRAQIASHPLYPKLLQAYIDCQ 139
GSG ++ A SL+ A A+ + ++SS AI+A+I SHP Y LL AY+DCQ
Sbjct: 70 GSGCSNPVLQLANGSLLEACAKAAKEPSSSSYAADVEAIKAKIISHPHYSSLLAAYLDCQ 129
Query: 140 KVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADPELDEFMETYCDILVKYKSDLSKP 199
KVGA PE++ L + ++ ++ R + +PELD+FME Y ++LVKY+ +L++P
Sbjct: 130 KVGAPPEVSARLTAVAQDLELRQRT-ALGGLGTATEPELDQFMEAYHEMLVKYREELTRP 188
Query: 200 YDEASSFLNNMETQLSNLC-------NVVSRSHGSDEADPGGSWEEDLSGGETEVSECFR 252
EA FL +ETQL++L N++S GS E D GS GGETE+ E
Sbjct: 189 LQEAMEFLRRVETQLNSLSISGRSLRNILST--GSSEEDQEGS------GGETELPE-ID 239
Query: 253 MPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEA 312
VD+E K +L++KY GY+S+LK E SKKKKKGKLPKEARQ L WW +HY WPYP+E+
Sbjct: 240 AHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSES 299
Query: 313 DKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMDSVCGP 357
KVALAESTGLD +QINNWFINQRKRHWKP++ +QF +MD+ P
Sbjct: 300 QKVALAESTGLDLKQINNWFINQRKRHWKPTDEMQFVMMDAYHPP 344
>sp|Q9FP29|KNOS1_ORYSJ Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica
GN=OSH6 PE=2 SV=1
Length = 301
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/254 (52%), Positives = 175/254 (68%), Gaps = 18/254 (7%)
Query: 114 VSSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWG 173
++ ++AQIA HP YP LL AYI+C+KVGA PE+A++L +I RE G
Sbjct: 39 LTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQI--G 96
Query: 174 ADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCN------VVSRSHGS 227
DPELDEFME YC +LV+YK +LS+P+DEA+SFL++++TQLSNLC+ + +H S
Sbjct: 97 VDPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATH-S 155
Query: 228 DEADPGGSWEEDLSGGETEV-----SECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKK 282
DE GS +ED GET++ + R+ D E K+ L++KY G +S L+ EF KK
Sbjct: 156 DEMV--GSSDEDQCSGETDMLDIGQEQSSRL--ADHELKEMLLKKYSGCLSRLRSEFLKK 211
Query: 283 KKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKP 342
+KKGKLPK+AR L +WWN HY WPYPTE DK+ LA TGLD +QINNWFINQRKRHWKP
Sbjct: 212 RKKGKLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKP 271
Query: 343 SESVQFNLMDSVCG 356
S+ ++F LM+ V G
Sbjct: 272 SDGMRFALMEGVAG 285
>sp|O04135|KNAP2_MALDO Homeobox protein knotted-1-like 2 OS=Malus domestica PE=2 SV=1
Length = 397
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 170/248 (68%), Gaps = 14/248 (5%)
Query: 117 AIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADP 176
AI+A+I +HP Y LL+AY+DCQ+VGA ++ L R+E + R+ S DP
Sbjct: 131 AIKAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVARQEFEARQRSSGTSRET-SKDP 189
Query: 177 ELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCN--------VVSRSHGSD 228
ELD+FME Y D+LVKY+ +L++P EA F+ +ETQL+ L N + S S
Sbjct: 190 ELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFSPSEDKC 249
Query: 229 EADPGGSWEEDLSGGETEVSECFRMPPV--DRETKDNLIRKYGGYISTLKHEFSKKKKKG 286
E E++ SGGETEV E + P DRE K++L+RKY GY+S+LK E SKKKKKG
Sbjct: 250 EGIGSSEEEQENSGGETEVPE---IDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKG 306
Query: 287 KLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESV 346
KLPK+ARQ L WW LHY WPYP+E++KVALAESTGLDQ+QINNWFINQRKRHWKPSE +
Sbjct: 307 KLPKDARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDM 366
Query: 347 QFNLMDSV 354
QF +MD +
Sbjct: 367 QFMVMDGL 374
>sp|P46609|KNOS6_ORYSJ Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica
GN=OSH1 PE=2 SV=2
Length = 361
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/243 (53%), Positives = 168/243 (69%), Gaps = 17/243 (6%)
Query: 117 AIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADP 176
AI+A+I SHP Y LL AY+DCQKVGA PE+A L + ++ ++ R + +P
Sbjct: 103 AIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRT-ALGVLGAATEP 161
Query: 177 ELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLC-------NVVSRSHGSDE 229
ELD+FME Y ++LVKY+ +L++P EA FL +ETQL+ L N++S GS E
Sbjct: 162 ELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNILSS--GSSE 219
Query: 230 ADPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLP 289
D GS GGETE+ E VD+E K +L++KY GY+S+LK E SKKKKKGKLP
Sbjct: 220 EDQEGS------GGETELPE-IDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLP 272
Query: 290 KEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFN 349
K+ARQ L +WW LHY WPYP+E+ KVALAESTGLD +QINNWFINQRKRHWKPS+ +QF
Sbjct: 273 KDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFV 332
Query: 350 LMD 352
+MD
Sbjct: 333 MMD 335
>sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus domestica PE=2 SV=1
Length = 398
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 170/248 (68%), Gaps = 14/248 (5%)
Query: 117 AIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADP 176
AI+A+I +HP Y L++AY+DCQ+VGA ++ L R+E + R+ S DP
Sbjct: 132 AIKAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVARQEFEARQRSSGTSRET-SKDP 190
Query: 177 ELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCN--------VVSRSHGSD 228
ELD+FME Y D+LVKY+ +L++P EA F+ +ETQL+ L N + S S
Sbjct: 191 ELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNMLGNNNNAPPLRIFSPSEDKC 250
Query: 229 EADPGGSWEEDLSGGETEVSECFRMPPV--DRETKDNLIRKYGGYISTLKHEFSKKKKKG 286
E E++ SGGETEV E + P DRE K++L+RKY GY+S+LK E SKKKKKG
Sbjct: 251 EGIGSSEDEQENSGGETEVPE---IDPRAEDRELKNHLLRKYSGYLSSLKQELSKKKKKG 307
Query: 287 KLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESV 346
KLPKEARQ L WW LHY WPYP+E++KVALAESTGLDQ+QINNWFINQRKRHWKPSE +
Sbjct: 308 KLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDM 367
Query: 347 QFNLMDSV 354
QF +MD +
Sbjct: 368 QFMVMDGL 375
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1
Length = 359
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/280 (47%), Positives = 179/280 (63%), Gaps = 18/280 (6%)
Query: 80 GSGNNSSSSSDAASSLMVAVAEIQRNNTTSSEEQVSSAIRAQIASHPLYPKLLQAYIDCQ 139
GSGN ++ L+ A + + +++S AI+A+I SHP Y LL AY++C
Sbjct: 67 GSGNPVLQLANGGG-LLDACVKAKEPSSSSPYAGDVEAIKAKIISHPHYYSLLTAYLECN 125
Query: 140 KVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADPELDEFMETYCDILVKYKSDLSKP 199
KVGA PE++ L +I +E + R + +PELD+FME Y ++LVK++ +L++P
Sbjct: 126 KVGAPPEVSARLTEIAQEVEARQRT-ALGGLAAATEPELDQFMEAYHEMLVKFREELTRP 184
Query: 200 YDEASSFLNNMETQLSNLC-------NVVSRSHGSDEADPGGSWEEDLSGGETEVSECFR 252
EA F+ +E+QL++L N++S GS E D G SGGETE+ E
Sbjct: 185 LQEAMEFMRRVESQLNSLSISGRSLRNILSS--GSSEEDQEG------SGGETELPEV-D 235
Query: 253 MPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEA 312
VD+E K +L++KY GY+S+LK E SKKKKKGKLPKEARQ L WW+ HY WPYP+E
Sbjct: 236 AHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSET 295
Query: 313 DKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMD 352
KVALAESTGLD +QINNWFINQRKRHWKPSE + +MD
Sbjct: 296 QKVALAESTGLDLKQINNWFINQRKRHWKPSEEMHHLMMD 335
>sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza sativa subsp. japonica
GN=OSH10 PE=2 SV=1
Length = 337
Score = 224 bits (572), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/240 (51%), Positives = 157/240 (65%), Gaps = 13/240 (5%)
Query: 109 SSEEQVSSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVS 168
S E+ + AI+A+I SHPLYP LL+A+IDCQKVGA PE+ L + E D + +
Sbjct: 53 SFHERETDAIKAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYLQ 112
Query: 169 SCCWGADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGS- 227
+DPELDEFMETY D+LV Y+ +L++P EA F NME Q+ + + S G
Sbjct: 113 GQS--SDPELDEFMETYIDMLVSYRQELTRPIQEADQFFRNMEAQIDSFTLDDNGSEGGN 170
Query: 228 ---DEADPGGSWEEDLSGGETEV-SECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKK 283
DE + GG + S G E+ S C D+E K +L+ KY GY+S+L E SKKK
Sbjct: 171 SSEDEQEAGGG--DMASAGLPEITSPCAE----DKELKSHLLNKYSGYLSSLWRELSKKK 224
Query: 284 KKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPS 343
KKGKLP++ARQ L WW LHY WPYP+E +K ALAESTGLD +QINNWFINQRKRHWKP+
Sbjct: 225 KKGKLPRDARQKLLHWWQLHYRWPYPSELEKAALAESTGLDAKQINNWFINQRKRHWKPT 284
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica
GN=OSH71 PE=2 SV=1
Length = 311
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 163/250 (65%), Gaps = 13/250 (5%)
Query: 114 VSSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWG 173
++ ++AQIA HP YP LL AYI+C+KVGA PE+ +L++I REG G
Sbjct: 51 LTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEI-G 109
Query: 174 ADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDEADPG 233
DPELDEFMETYC +L +YK +L++P+DEA+SFL + TQL++LC + + G
Sbjct: 110 LDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVG 169
Query: 234 GSWEEDLSG-------GETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKG 286
S +E SG G+ S D E K+ L++KY G +S L+ EF KK+KKG
Sbjct: 170 SSEDEPCSGDADAADFGQEHSSRL-----ADHELKEMLLKKYSGCLSRLRSEFLKKRKKG 224
Query: 287 KLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESV 346
KLPK+AR L DWWN HY WPYPTE DKV LA TGLD +QINNWFINQRKRHWKPSE +
Sbjct: 225 KLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDM 284
Query: 347 QFNLMDSVCG 356
+F LM+ V G
Sbjct: 285 RFALMEGVTG 294
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica
GN=OSH71 PE=2 SV=2
Length = 311
Score = 223 bits (568), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 163/250 (65%), Gaps = 13/250 (5%)
Query: 114 VSSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWG 173
++ ++AQIA HP YP LL AYI+C+KVGA PE+ +L++I REG G
Sbjct: 51 LTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGATAGGEI-G 109
Query: 174 ADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDEADPG 233
DPELDEFMETYC +L +YK +L++P+DEA+SFL + TQL++LC + + G
Sbjct: 110 LDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVG 169
Query: 234 GSWEEDLSG-------GETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKG 286
S +E SG G+ S D E K+ L++KY G +S L+ EF KK+KKG
Sbjct: 170 SSEDEPCSGDADAADFGQEHSSRL-----ADHELKEMLLKKYSGCLSRLRSEFLKKRKKG 224
Query: 287 KLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESV 346
KLPK+AR L DWWN HY WPYPTE DKV LA TGLD +QINNWFINQRKRHWKPSE +
Sbjct: 225 KLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHWKPSEDM 284
Query: 347 QFNLMDSVCG 356
+F LM+ V G
Sbjct: 285 RFALMEGVTG 294
>sp|Q9M6D9|STM_BRAOL Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea GN=STM
PE=2 SV=1
Length = 383
Score = 221 bits (563), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 138/308 (44%), Positives = 185/308 (60%), Gaps = 17/308 (5%)
Query: 58 AYGGEHEIGNISAVYG-SEPEQMGSGNNSSSSSDAASSLMVAVAEIQRNNTT-----SSE 111
AY H+ ++ + + P Q SS S ++ + + EI N S
Sbjct: 57 AYQSHHQHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQNELLAGGLQSP 116
Query: 112 EQVSSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCC 171
S ++A+I +HP Y +LL AY++CQKVGA PE+ L++ + + + +
Sbjct: 117 VLSSLLVKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAAS-MGPTGS 175
Query: 172 WGADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDEA- 230
G DP LD+FME YC++LVKY+ +LSKP+ EA FL ++E Q +L S G EA
Sbjct: 176 LGEDPGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235
Query: 231 ---DPGGSWEEDLSGGETEVSECFRMPPV-DRETKDNLIRKYGGYISTLKHEFSKKKKKG 286
+ GS EE E +++ F P DRE K L+RKY GY+ +LK EF KK+KKG
Sbjct: 236 IERNNNGSSEE-----EVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKG 290
Query: 287 KLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESV 346
KLPKEARQ L DWW+ HY WPYP+E K+ALAESTGLDQ+QINNWFINQRKRHWKPSE +
Sbjct: 291 KLPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDM 350
Query: 347 QFNLMDSV 354
QF +MD+
Sbjct: 351 QFVVMDAT 358
>sp|Q38874|STM_ARATH Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana GN=STM
PE=1 SV=2
Length = 382
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/243 (51%), Positives = 161/243 (66%), Gaps = 12/243 (4%)
Query: 118 IRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADPE 177
++A+I +HP Y +LL AY++CQKVGA PE+ L++ + + + + C G DP
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAAS-MGPTGCLGEDPG 179
Query: 178 LDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSR---SHGSDEADPG- 233
LD+FME YC++LVKY+ +LSKP+ EA FL +E Q +L +G D
Sbjct: 180 LDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNN 239
Query: 234 -GSWEEDLSGGETEVSECFRMPPV-DRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKE 291
GS EE E +++ F P DRE K L+RKY GY+ +LK EF KK+KKGKLPKE
Sbjct: 240 NGSSEE-----EVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKE 294
Query: 292 ARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLM 351
ARQ L DWW+ HY WPYP+E K+ALAESTGLDQ+QINNWFINQRKRHWKPSE +QF +M
Sbjct: 295 ARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVM 354
Query: 352 DSV 354
D+
Sbjct: 355 DAT 357
>sp|Q75LX9|KNOS5_ORYSJ Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp.
japonica GN=Os03g0673500 PE=3 SV=1
Length = 337
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 150/238 (63%), Gaps = 13/238 (5%)
Query: 116 SAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNR--NWVVSSCCWG 173
+ I+A+I SHPLYP LL+A++DC+KVGA PE+ L + DV + + +
Sbjct: 69 AMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDVPQYSGDRCLPAQQPA 128
Query: 174 ADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDEADPG 233
ADPELD+FMETYC +L +Y +L++P EA F +E Q+ +L DE D
Sbjct: 129 ADPELDQFMETYCYMLTRYGQELARPIQEAEEFFRGIEEQIDSLA--------LDE-DVS 179
Query: 234 GSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKK--KGKLPKE 291
+E++++GG E S F V T+ +L+ KY GY+++L E S KKK G LP++
Sbjct: 180 YDYEDEVAGGLPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTGHLPRD 239
Query: 292 ARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFN 349
AR L WW+LHY WPYP+EA+K ALAESTGLD++Q+ NWFINQRKRHWKP + +
Sbjct: 240 ARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKPKPAAAMD 297
>sp|O80416|KNOSC_ORYSJ Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. japonica
GN=OSH15 PE=2 SV=1
Length = 355
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 162/258 (62%), Gaps = 32/258 (12%)
Query: 115 SSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLD------DIRREGDVSNRNWVVS 168
+ +I+A+I +HP Y LL AY+DCQKVGA PE+ L D R G R
Sbjct: 88 AESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDAR----- 142
Query: 169 SCCWGADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSH--- 225
DPELD+FME YC++L KY+ +L++P DEA FL +E+QL +
Sbjct: 143 ------DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGS 196
Query: 226 -----GSDEADPGGSWEEDL--SGGETEVSECFRMPPV--DRETKDNLIRKYGGYISTLK 276
+++ GS E+D+ SG E E E + P D+E K L++KY GY+S+L+
Sbjct: 197 ARLLLADGKSECVGSSEDDMDPSGRENEPPE---IDPRAEDKELKFQLLKKYSGYLSSLR 253
Query: 277 HEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQR 336
EFSKKKKKGKLPKEARQ L WW LHY WPYP+E +K+ALAESTGLDQ+QINNWFINQR
Sbjct: 254 QEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQR 313
Query: 337 KRHWKPSESVQFNLMDSV 354
KRHWKPSE + F +M+
Sbjct: 314 KRHWKPSEDMPFVMMEGF 331
>sp|O65034|KNOSC_ORYSI Homeobox protein knotted-1-like 12 OS=Oryza sativa subsp. indica
GN=OSH15 PE=2 SV=2
Length = 355
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/258 (48%), Positives = 162/258 (62%), Gaps = 32/258 (12%)
Query: 115 SSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLD------DIRREGDVSNRNWVVS 168
+ +I+A+I +HP Y LL AY+DCQKVGA PE+ L D R G R
Sbjct: 88 AESIKAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTATAAKLDARPPGRHDAR----- 142
Query: 169 SCCWGADPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSH--- 225
DPELD+FME YC++L KY+ +L++P DEA FL +E+QL +
Sbjct: 143 ------DPELDQFMEAYCNMLAKYREELTRPIDEAMEFLKRVESQLDTIAGGAHGGGAGS 196
Query: 226 -----GSDEADPGGSWEEDL--SGGETEVSECFRMPPV--DRETKDNLIRKYGGYISTLK 276
+++ GS E+D+ SG E E E + P D+E K L++KY GY+S+L+
Sbjct: 197 ARLLLADGKSECVGSSEDDMDPSGRENEPPE---IDPRAEDKELKFQLLKKYSGYLSSLR 253
Query: 277 HEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQR 336
EFSKKKKKGKLPKEARQ L WW LHY WPYP+E +K+ALAESTGLDQ+QINNWFINQR
Sbjct: 254 QEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQR 313
Query: 337 KRHWKPSESVQFNLMDSV 354
KRHWKPSE + F +M+
Sbjct: 314 KRHWKPSEDMPFVMMEGF 331
>sp|O22299|LET6_SOLLC Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum
GN=LET6 PE=2 SV=1
Length = 355
Score = 213 bits (542), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/236 (51%), Positives = 155/236 (65%), Gaps = 10/236 (4%)
Query: 124 SHPLYPKLLQAYIDCQKVGASPEIANVLDDI-RREGDVSNRNWVVSSCCWGADPELDEFM 182
+HP Y +LL AY++CQK+GA PE+ L++I + + G DP LD+FM
Sbjct: 102 AHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFM 161
Query: 183 ETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGS---DEADPGGSWEED 239
E YC++L KY+ +LSKP+ EA FL+ +E Q L + SH S + D GS +E
Sbjct: 162 EAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDE- 220
Query: 240 LSGGETEVSECFRMPPV-DRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFD 298
E +V+ F P DRE K L+RKY GY+ +LK EF KK+KKGKLPKEARQ L D
Sbjct: 221 ----EVDVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVD 276
Query: 299 WWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMDSV 354
WW H WPYP+E+ K+ALAESTGLDQ+QINNWFINQRKRHWKPSE +QF +MD+
Sbjct: 277 WWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA 332
>sp|Q41853|RSH1_MAIZE Homeobox protein rough sheath 1 OS=Zea mays GN=RS1 PE=2 SV=1
Length = 351
Score = 207 bits (528), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 158/242 (65%), Gaps = 21/242 (8%)
Query: 124 SHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADPELDEFME 183
+HP Y LL AY+DCQKVGA P++ L + + D S + DPELD+FME
Sbjct: 96 AHPQYSALLAAYLDCQKVGAPPDVLERLTAMAAKLDAS-----AAGRHEPRDPELDQFME 150
Query: 184 TYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNV-------VSRSHGSDEADPGGSW 236
YC++LVKY+ +L++P DEA FL +E QL + +S + G E GS
Sbjct: 151 AYCNMLVKYREELTRPIDEAMEFLKRVEAQLDCISGGGGSSSARLSLADGKSEG--VGSS 208
Query: 237 EEDL--SGGETEVSECFRMPPV--DRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEA 292
E+D+ +G E + E + P D+E K L++KY GY+S+L+ EFSKKKKKGKLPKEA
Sbjct: 209 EDDMDPNGRENDPPE---IDPRAEDKELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEA 265
Query: 293 RQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSESVQFNLMD 352
RQ L WW LHY WPYP+E +K+ALAESTGLDQ+QINNWFINQRKRHWKPSE + F +M+
Sbjct: 266 RQKLLHWWELHYKWPYPSETEKIALAESTGLDQKQINNWFINQRKRHWKPSEDMPFVMME 325
Query: 353 SV 354
Sbjct: 326 GF 327
>sp|Q10ED2|KNOS8_ORYSJ Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica
GN=OSH43 PE=2 SV=1
Length = 341
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 145/249 (58%), Gaps = 31/249 (12%)
Query: 116 SAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRR-----EGDVSNRNWVVSSC 170
+A++A+I SHP Y LL AY+ C+KVGA P++ L + E D R
Sbjct: 81 AAVKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQLDEADGHPRR--RHEP 138
Query: 171 CWGADP-ELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDE 229
DP +LD+FM+ YC +L +Y+ +L +P EA+ F + +ETQL +L GS E
Sbjct: 139 QRDDDPDQLDQFMDAYCSMLTRYREELERPILEAAEFFSRVETQLDSLAESNCEGTGSSE 198
Query: 230 ADPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLP 289
E+D P D++ K L+RKYGG + L+ FSK+ KKGKLP
Sbjct: 199 E------EQD---------------PSDKQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLP 237
Query: 290 KEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSE--SVQ 347
KEARQ L WW LHY WPYP+E +K+ LA++TGLDQ+QINNWFINQRKRHWKP+
Sbjct: 238 KEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHWKPTPVAGTA 297
Query: 348 FNLMDSVCG 356
F M++ G
Sbjct: 298 FPTMEAAGG 306
>sp|Q948L5|KNOS7_ORYSJ Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica
GN=OSH3 PE=2 SV=1
Length = 365
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 153/249 (61%), Gaps = 13/249 (5%)
Query: 118 IRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGA--D 175
++A+I SHP Y +LL A++DC KVG E A + R + R +S A D
Sbjct: 73 VKARIVSHPRYHRLLAAFLDCHKVGCPAEAAEEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 176 PELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSN------LCNVVSRSHGS-- 227
PELD+FME YC +LV+ K +LS+P EA FL +E++L++ L ++S S
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQEAEEFLRTVESELNSINSGPPLTALISESKAGLD 192
Query: 228 ---DEADPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKK 284
D+ GS E + E E D+ K +L+RKY GY+ L+ E SKK+K
Sbjct: 193 SSDDDEHEDGSGMEMMEAAEDEDLGIIDPRSDDKALKRHLLRKYSGYLGGLRKELSKKRK 252
Query: 285 KGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSE 344
KGKLPKEARQ L WW LHY WP P+E +K+ALAESTGL+Q+QINN FINQRKRHWKP+E
Sbjct: 253 KGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHWKPTE 312
Query: 345 SVQFNLMDS 353
++F +M++
Sbjct: 313 EMEFAVMEA 321
>sp|Q10EC6|KNOS9_ORYSJ Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica
GN=Os03g0772100 PE=2 SV=2
Length = 347
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 139/251 (55%), Gaps = 31/251 (12%)
Query: 116 SAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDI---RREGDVSNRNWVVSSCCW 172
+A++A+I SHP Y LL AY+ C+KVGA P++ L + +++ D ++ +
Sbjct: 79 AAMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPR 138
Query: 173 GA----DPELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSD 228
D +LD+FM +D + A+ + QL ++ + GS
Sbjct: 139 RDDDVPDHQLDQFMH----------ADEVQGGAGAADPGSRGVLQLDSIADSNCEGTGSS 188
Query: 229 EADPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKL 288
E E+D S E E + P D++ K L+ KYGG + L+ FSK+ KKGKL
Sbjct: 189 EE------EQDTSCPEAE-----EIDPSDKQLKHQLLMKYGGSLGDLRQAFSKRTKKGKL 237
Query: 289 PKEARQILFDWWNLHYN-WPYPTEADKVALAESTGLDQRQINNWFINQRKRHWKPSE--S 345
PKEAR L WW LHY+ WPYP+E +K+ LA++TGLDQ+QI+NWFINQRKRHWKP+
Sbjct: 238 PKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHWKPTPVAG 297
Query: 346 VQFNLMDSVCG 356
+ F +++ G
Sbjct: 298 MTFPTVEAAGG 308
>sp|P46608|HSBH1_SOYBN Homeobox protein SBH1 OS=Glycine max GN=H1 PE=2 SV=1
Length = 379
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 126/239 (52%), Gaps = 39/239 (16%)
Query: 117 AIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDD-IRREGDVSNRNWVVSSCCWGAD 175
A++A+I +HP Y +LL AY++CQKVGA PE+ L++ ++ + S C G D
Sbjct: 123 AVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCIGED 182
Query: 176 PELDEFMETYCDILVKYKSDLSKPYDEASSFLNNMETQLSNLCNVVSRSHGSDEADPGGS 235
P LD+FME YC++L KY+ +LSKP EA FL +E Q NL S ++ D GS
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFASNEGGDRNGS 242
Query: 236 WEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQI 295
EED+ ++ DR+ K L+RKY GY+ +LK EF KK+KKGKLPKEARQ
Sbjct: 243 SEEDV-----DLHNMIDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQ 297
Query: 296 LFDWWNLHYNWPYPTEADK---------------------------------VALAEST 321
L +WWN HY WPYP+E+ K + + +
Sbjct: 298 LLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPS 356
>sp|P56667|KNX10_MAIZE Homeobox protein knotted-1-like 10 (Fragment) OS=Zea mays GN=KNOX10
PE=3 SV=1
Length = 88
Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 57/85 (67%), Positives = 69/85 (81%)
Query: 257 DRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVA 316
D + K+ L+ KY GY+S+L E S+KKKKGKLP++ARQ L WW LHY WPYP+E +K A
Sbjct: 2 DNDLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPSELEKAA 61
Query: 317 LAESTGLDQRQINNWFINQRKRHWK 341
LAESTGL+ +QINNWFINQRKRHWK
Sbjct: 62 LAESTGLEAKQINNWFINQRKRHWK 86
>sp|P56662|KNOX4_MAIZE Homeobox protein knotted-1-like 4 (Fragment) OS=Zea mays GN=KNOX4
PE=2 SV=1
Length = 85
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 74/85 (87%)
Query: 259 ETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALA 318
E K L++KY GY+S+L+ EFSKKKKKGKLPKEARQ L WW LHY WPYP+E +K+ALA
Sbjct: 1 ELKYQLLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPSETEKIALA 60
Query: 319 ESTGLDQRQINNWFINQRKRHWKPS 343
E+TGLDQ+QINNWFINQRKRHWKPS
Sbjct: 61 EATGLDQKQINNWFINQRKRHWKPS 85
>sp|P56666|KNOX8_MAIZE Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8
PE=2 SV=1
Length = 85
Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats.
Identities = 62/85 (72%), Positives = 72/85 (84%)
Query: 259 ETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALA 318
E K L+RKYGGY+ L+ EFSK+KKKGKLPKEARQ L WW LHY WPYP+E +K+ALA
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALA 60
Query: 319 ESTGLDQRQINNWFINQRKRHWKPS 343
E+TGLD +QINNWFINQRKRHWKP+
Sbjct: 61 ETTGLDPKQINNWFINQRKRHWKPA 85
>sp|P48000|KNAT3_ARATH Homeobox protein knotted-1-like 3 OS=Arabidopsis thaliana GN=KNAT3
PE=1 SV=1
Length = 431
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 124/254 (48%), Gaps = 28/254 (11%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASP--EIANVLDDIRREGDVSNRNWVVSSCCWGA-- 174
+A+I SHPLY +LL A++ C ++ A+P ++ + + + V + + + G
Sbjct: 160 KAEILSHPLYEQLLSAHVACLRI-ATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQGLVG 218
Query: 175 -DPELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVVSRSHG--- 226
D ELD+FM Y +L +K L + EA +E L +L V S G
Sbjct: 219 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV-SPGEGMGA 277
Query: 227 --SDEADPGGSWEEDLSGGETEV----------SECFRMPPVDRETKDNLIRKYGGYIST 274
SD+ D + ++ G +V SE M V +E K L + Y I
Sbjct: 278 TMSDDEDEQVESDANMFDGGLDVLGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 337
Query: 275 LKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFIN 334
++ E +K++ GKLP + +L WW H WPYPTE DK L + TGL +QINNWFIN
Sbjct: 338 IREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 397
Query: 335 QRKRHWK--PSESV 346
QRKR+W PS S
Sbjct: 398 QRKRNWHSNPSSST 411
>sp|Q9FPQ8|KNAT7_ARATH Homeobox protein knotted-1-like 7 OS=Arabidopsis thaliana GN=KNAT7
PE=2 SV=1
Length = 291
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 118/248 (47%), Gaps = 26/248 (10%)
Query: 118 IRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADP- 176
++ +IA+HP+Y +LL A++ C +V + +++ + R++ ++ + D
Sbjct: 29 LKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLLRSYASTAVGYHHDRH 88
Query: 177 ELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVV-----SRSHGS 227
ELD F+ Y +L +K L + EA +E L +L +
Sbjct: 89 ELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGSGATMSE 148
Query: 228 DEADPGGSWEED-----LSGGE----------TEVSECFRMPPVDRETKDNLIRKYGGYI 272
DE D + D SGG TE SE M V +E K L + + I
Sbjct: 149 DEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTE-SERSLMERVRQELKLELKQGFKSRI 207
Query: 273 STLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWF 332
++ E +K++ GKLP + +L +WW H WPYPTE DK L E TGL +QINNWF
Sbjct: 208 EDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLKQINNWF 267
Query: 333 INQRKRHW 340
INQRKR+W
Sbjct: 268 INQRKRNW 275
>sp|P48002|KNAT5_ARATH Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5
PE=1 SV=2
Length = 383
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 115 SSAIRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRR-EGDVSNRNWVVSS-CCW 172
S++ +A I HP+Y +LL A++ C +V A +D I R + +S + V +
Sbjct: 115 SASYKAAILRHPMYEQLLAAHVACLRV------ATPVDQIPRIDAQLSQLHTVAAKYSTL 168
Query: 173 GA---DPELDEFMETYCDILVKYKSDLSKPY----DEASSFLNNMETQLSNLCNVV-SRS 224
G + ELD FM Y +L +K L EA + +E L +L V S S
Sbjct: 169 GVVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSES 228
Query: 225 HGS----DEADPGGSWEEDLSGGETEVSECFR--------------MPPVDRETKDNLIR 266
+G DE D E ++ G + S+C M V +E K L +
Sbjct: 229 NGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQ 288
Query: 267 KYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQR 326
+ I ++ E +K++ GKLP + +L +WW H WPYPTE DK L + TGL +
Sbjct: 289 GFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLK 348
Query: 327 QINNWFINQRKRHW 340
QINNWFINQRKR+W
Sbjct: 349 QINNWFINQRKRNW 362
>sp|O04136|KNAP3_MALDO Homeobox protein knotted-1-like 3 OS=Malus domestica PE=2 SV=1
Length = 427
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 121/254 (47%), Gaps = 28/254 (11%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASP--EIANVLDDIRREGDVSNRNWVVSSCCWGADP 176
+A+I +HPLY LL A++ C ++ A+P ++ + + + +V + + + G D
Sbjct: 168 KAEILAHPLYEPLLSAHVACLRI-ATPVDQLPRIDAQLAQSQNVVAKYSALGNGMVGDDK 226
Query: 177 ELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVVSRSHGSDEA-- 230
ELD+FM Y +L +K L + EA +E L +L V S G+
Sbjct: 227 ELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV-SPGEGTSATMS 285
Query: 231 --------------DPGGSWEEDLSGGETEVSECFR--MPPVDRETKDNLIRKYGGYIST 274
D G + + G +E R M V +E K L + Y I
Sbjct: 286 DDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 345
Query: 275 LKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFIN 334
++ E +K++ GKLP + +L WW H WPYPTE DK L + TGL +QINNWFIN
Sbjct: 346 IREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFIN 405
Query: 335 QRKRHWK--PSESV 346
QRKR+W PS S
Sbjct: 406 QRKRNWHSNPSTST 419
>sp|P56661|KNOX3_MAIZE Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3
PE=2 SV=1
Length = 88
Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 70/87 (80%)
Query: 257 DRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVA 316
D+E K L+RKY G + L+ E KK+KK KLPKEARQ L WW LHY WPYP+E +K+A
Sbjct: 2 DKELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIA 61
Query: 317 LAESTGLDQRQINNWFINQRKRHWKPS 343
LAESTGL+Q+QINNWFINQRKRHWKPS
Sbjct: 62 LAESTGLEQKQINNWFINQRKRHWKPS 88
>sp|P46606|HD1_BRANA Homeobox protein HD1 OS=Brassica napus GN=HD1 PE=2 SV=1
Length = 294
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 118/254 (46%), Gaps = 37/254 (14%)
Query: 118 IRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGA--- 174
++ +IA+HP+Y +LL A++ C +V + ++ E +S+ + ++ S A
Sbjct: 31 MKGEIATHPMYDQLLAAHVACLRVATPIDQLPII-----EAQLSHSHHLLRSYASTAVGF 85
Query: 175 ----DPELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVV----- 221
ELD F+ Y +L +K L + EA +E L +L
Sbjct: 86 SHHDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGS 145
Query: 222 SRSHGSDEADPGGSWEED-----LSGGE----------TEVSECFRMPPVDRETKDNLIR 266
+ DE D + D SGG TE SE M V +E K L +
Sbjct: 146 GATMSEDEDDLQMDFSSDNSGVDFSGGHDMTGFGPLLPTE-SERSLMERVRQELKLELKQ 204
Query: 267 KYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQR 326
+ I ++ E +K++ GKLP + +L +WW H WPYPTE DK L E TGL +
Sbjct: 205 GFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPTEDDKAKLVEETGLQLK 264
Query: 327 QINNWFINQRKRHW 340
QINNWFINQRKR+W
Sbjct: 265 QINNWFINQRKRNW 278
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11
PE=3 SV=1
Length = 88
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 71/88 (80%)
Query: 256 VDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKV 315
DRE K+ L++KY G +S L+ EF KK+KKGKLPK+AR L DWWN HY WPYPTE DKV
Sbjct: 1 ADRELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKV 60
Query: 316 ALAESTGLDQRQINNWFINQRKRHWKPS 343
LA +TGLD +QINNWFINQRKRHWKPS
Sbjct: 61 RLAAATGLDPKQINNWFINQRKRHWKPS 88
>sp|P48001|KNAT4_ARATH Homeobox protein knotted-1-like 4 OS=Arabidopsis thaliana GN=KNAT4
PE=2 SV=3
Length = 393
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASP--EIANVLDDIRREGDVSNRNWVVSSC---CWG 173
+A+I SHPLY +LL A++ C ++ A+P ++ + + + +V + + + G
Sbjct: 124 KAEILSHPLYEQLLSAHVACLRI-ATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQGLLAG 182
Query: 174 ADPELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNV-------VS 222
D ELD FM Y +L +K L + EA +E L + V +
Sbjct: 183 DDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEGTGAT 242
Query: 223 RSHGSDEADPGGSWEED-----LSGGETEVSECFR--MPPVDRETKDNLIRKYGGYISTL 275
S DE + D L G +E R M V +E K L + Y I +
Sbjct: 243 MSEDEDEQVESDAHLFDGSLDGLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDI 302
Query: 276 KHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQ 335
+ E +K++ GKLP + +L WW H WPYPTE DK L + TGL +QINNWFINQ
Sbjct: 303 REEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQ 362
Query: 336 RKRHWK--PSESV 346
RKR+W PS S
Sbjct: 363 RKRNWHSNPSSST 375
>sp|Q0J6N4|KNOSD_ORYSJ Homeobox protein knotted-1-like 13 OS=Oryza sativa subsp. japonica
GN=OSH45 PE=2 SV=2
Length = 374
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDD--IRREGDVSNRNWVVSSCCWGADP 176
+A+I +HPLY +LL A++ C ++ + +D + +G V+ + + ++
Sbjct: 109 KAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAAAGDDGR 168
Query: 177 ELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNV-------VSRSH 225
ELD+FM Y +L +K L + EA +E L +L + S
Sbjct: 169 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSD 228
Query: 226 GSDEA--------DPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGGYISTLKH 277
G D+ DP +++ G SE M V +E K L + Y + ++
Sbjct: 229 GEDDQADSEANMYDPSLDGADNMGFGLPTESERSLMERVRQELKHELKQGYKEKLIDIRE 288
Query: 278 EFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRK 337
E +K++ GKLP + L WW H WPYPTE DK L + TGL +QINNWFINQRK
Sbjct: 289 EILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPTEEDKARLVQETGLQLKQINNWFINQRK 348
Query: 338 RHWK--PSESV 346
R+W PS S
Sbjct: 349 RNWHSNPSSST 359
>sp|P56669|HLG3_MAIZE Homeobox protein liguleless 3 (Fragment) OS=Zea mays GN=LG3 PE=3
SV=1
Length = 85
Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/85 (69%), Positives = 69/85 (81%)
Query: 259 ETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALA 318
E K+ L++KY G +S L+ EF KK+KKGKLPK+AR +L +WWN HY WPYPTE DKV LA
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPTEEDKVRLA 60
Query: 319 ESTGLDQRQINNWFINQRKRHWKPS 343
TGLD +QINNWFINQRKRHWKPS
Sbjct: 61 AMTGLDPKQINNWFINQRKRHWKPS 85
>sp|Q94LW3|KNOS3_ORYSJ Homeobox protein knotted-1-like 3 OS=Oryza sativa subsp. japonica
GN=HOS66 PE=2 SV=1
Length = 314
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 34/252 (13%)
Query: 118 IRAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRREGDVSNRNWVVSSCCWGADP- 176
++ +IA HPL +L+ A++ C +V + ++D ++ + ++ S P
Sbjct: 53 LKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLID-----AQLAQSSGLLHSYAAHHRPF 107
Query: 177 -------ELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVV---- 221
ELD F+ Y +L ++ L + EA +E L +L
Sbjct: 108 LSPHDKQELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEG 167
Query: 222 ---SRSHGSDEADPG-------GSWEEDLSGGETEV---SECFRMPPVDRETKDNLIRKY 268
+ S DE P GS DL G + SE M V +E K L + +
Sbjct: 168 TGATMSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGF 227
Query: 269 GGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQI 328
I ++ E +K++ GKLP + IL WW H WPYPTE DK L E TGL +QI
Sbjct: 228 KSRIEDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPTEDDKAKLVEETGLQLKQI 287
Query: 329 NNWFINQRKRHW 340
NNWFINQRKR+W
Sbjct: 288 NNWFINQRKRNW 299
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5
PE=2 SV=1
Length = 85
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 68/85 (80%)
Query: 259 ETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALA 318
E K+ L++KY G +S L+ EF KK+KKGKLPK+AR L DWWN HY WPYPTE DKV LA
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLA 60
Query: 319 ESTGLDQRQINNWFINQRKRHWKPS 343
TGLD +QINNWFINQRKRHWKPS
Sbjct: 61 AMTGLDPKQINNWFINQRKRHWKPS 85
>sp|O22300|LET12_SOLLC Homeobox protein knotted-1-like LET12 OS=Solanum lycopersicum
GN=LET12 PE=2 SV=1
Length = 426
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 113/251 (45%), Gaps = 35/251 (13%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASPEIANVLDDIRR--EGDVSNRNWVVSSCCWGA-- 174
+A I +HPLY +LL A++ C + IA +D + R ++N V G
Sbjct: 164 KADILNHPLYDQLLSAHVSCLR------IATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 217
Query: 175 ----DPELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVV----- 221
D +LD+FM Y +L +K L + EA +E L +L V
Sbjct: 218 PPLDDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEGT 277
Query: 222 ----------SRSHGSDEADPGGSWEEDLSGGETEVSECFR--MPPVDRETKDNLIRKYG 269
++ D G + + G +E R M V +E K L + Y
Sbjct: 278 GATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELKHELKQGYK 337
Query: 270 GYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQIN 329
I ++ E +K++ GKLP + +L WW H WPYPTE DK L + TGL +QIN
Sbjct: 338 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQIN 397
Query: 330 NWFINQRKRHW 340
NWFINQRKR+W
Sbjct: 398 NWFINQRKRNW 408
>sp|Q0E3C3|KNOS2_ORYSJ Homeobox protein knotted-1-like 2 OS=Oryza sativa subsp. japonica
GN=HOS58 PE=2 SV=2
Length = 313
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 114/250 (45%), Gaps = 34/250 (13%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASP--EIANVLDDIRREGDVSNRNWVVSSCCWGADP 176
+A +A+HPLY +LL+A++ C +V A+P ++ + I ++ +
Sbjct: 43 KAAVAAHPLYERLLEAHVACLRV-ATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSGG 101
Query: 177 -ELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNV----------- 220
ELD FM Y +L +K L + EA +E L +L
Sbjct: 102 EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMS 161
Query: 221 ----------VSRSHGSDEADPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRKYGG 270
+ G+D +D G L+ GE + E R E K+ L + Y
Sbjct: 162 DDEDNQVDSEANMFDGNDGSDGMGFGPLMLTEGERSLVERVR-----HELKNELKQGYKE 216
Query: 271 YISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINN 330
+ ++ E +K++ GKLP + IL WW H WPYPTE DK L + TGL +QINN
Sbjct: 217 KLVDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINN 276
Query: 331 WFINQRKRHW 340
WFINQRKR+W
Sbjct: 277 WFINQRKRNW 286
>sp|Q94LW4|KNOSB_ORYSJ Homeobox protein knotted-1-like 11 OS=Oryza sativa subsp. japonica
GN=HOS59 PE=2 SV=2
Length = 323
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 108/253 (42%), Gaps = 36/253 (14%)
Query: 119 RAQIASHPLYPKLLQAYIDCQKVGASPEIANVLD------DIRREGDVSNRNWVVSSCCW 172
+A IA+HPLY +LL+A++ C +V + +D + +
Sbjct: 48 KAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGGAP 107
Query: 173 GADPELDEFMETYCDILVKYKSDLSKPYD----EASSFLNNMETQLSNLCNVVSRS---- 224
ELD FM Y +L +K L + EA +E L +L R
Sbjct: 108 SGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGA 167
Query: 225 -----------------HGSDEADPGGSWEEDLSGGETEVSECFRMPPVDRETKDNLIRK 267
G+D +D G L+ GE + E R +E K L +
Sbjct: 168 TMSDDEDNQVDSESNMFDGNDGSDGMGFGPLMLTEGERSLVERVR-----QELKHELKQG 222
Query: 268 YGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQ 327
Y + ++ E +K++ GKLP + L WW H WPYPTE DK L + TGL +Q
Sbjct: 223 YREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQ 282
Query: 328 INNWFINQRKRHW 340
INNWFINQRKR+W
Sbjct: 283 INNWFINQRKRNW 295
>sp|P56659|KNOX1_MAIZE Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1
PE=2 SV=1
Length = 88
Score = 88.6 bits (218), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 53/85 (62%)
Query: 256 VDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKV 315
V +E K L + + I ++ E +K++ GKLP + IL WW H WPYPTE DK
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKA 60
Query: 316 ALAESTGLDQRQINNWFINQRKRHW 340
L E TGL +QINNWFINQRKR+W
Sbjct: 61 KLVEETGLQLKQINNWFINQRKRNW 85
>sp|P56660|KNOX2_MAIZE Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2
PE=2 SV=1
Length = 88
Score = 86.7 bits (213), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 52/85 (61%)
Query: 256 VDRETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKV 315
V +E K L + Y + ++ E +K++ GKLP + L WW H WPYPTE DK
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKA 60
Query: 316 ALAESTGLDQRQINNWFINQRKRHW 340
L + TGL +QINNWFINQRKR+W
Sbjct: 61 RLVQETGLQLKQINNWFINQRKRNW 85
>sp|P56665|KNOX7_MAIZE Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7
PE=2 SV=1
Length = 85
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 259 ETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALA 318
E K+ L + Y + ++ E +K++ GKLP + +L WW H WPYPTE DK L
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 319 ESTGLDQRQINNWFINQRKRHW 340
+ TGL +QINNWFINQRKR+W
Sbjct: 61 QETGLQLKQINNWFINQRKRNW 82
>sp|P56664|KNOX6_MAIZE Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6
PE=2 SV=1
Length = 85
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 259 ETKDNLIRKYGGYISTLKHEFSKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALA 318
E K+ L + Y + ++ E +K++ GKLP + +L WW H WPYPTE DK L
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLV 60
Query: 319 ESTGLDQRQINNWFINQRKRHW 340
+ TGL +QINNWFINQRKR+W
Sbjct: 61 QETGLQLKQINNWFINQRKRNW 82
>sp|Q54VB4|HBX9_DICDI Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1
Length = 639
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 39/58 (67%)
Query: 281 KKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKR 338
K+KK+GKLP EA IL W H PYPTE +KVALA ST L QINNWF N R+R
Sbjct: 559 KRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616
>sp|Q2HJ84|PKNX1_BOVIN Homeobox protein PKNOX1 OS=Bos taurus GN=PKNOX1 PE=2 SV=1
Length = 436
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 280 SKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRH 339
S K K+G LPK A ++ W H PYPTE +K +A T L Q+NNWFIN R+R
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317
Query: 340 WKPSESVQFNLMDSVC 355
+P ++DS C
Sbjct: 318 LQP-------MLDSSC 326
>sp|O70477|PKNX1_MOUSE Homeobox protein PKNOX1 OS=Mus musculus GN=Pknox1 PE=2 SV=3
Length = 436
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 280 SKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRH 339
S K K+G LPK A ++ W H PYPTE +K +A T L Q+NNWFIN R+R
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317
Query: 340 WKPSESVQFNLMDSVC 355
+P ++DS C
Sbjct: 318 LQP-------MLDSSC 326
>sp|P55347|PKNX1_HUMAN Homeobox protein PKNOX1 OS=Homo sapiens GN=PKNOX1 PE=1 SV=3
Length = 436
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 280 SKKKKKGKLPKEARQILFDWWNLHYNWPYPTEADKVALAESTGLDQRQINNWFINQRKRH 339
S K K+G LPK A ++ W H PYPTE +K +A T L Q+NNWFIN R+R
Sbjct: 258 SSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNNWFINARRRI 317
Query: 340 WKPSESVQFNLMDSVC 355
+P ++DS C
Sbjct: 318 LQP-------MLDSSC 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,472,349
Number of Sequences: 539616
Number of extensions: 6311755
Number of successful extensions: 107600
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 301
Number of HSP's that attempted gapping in prelim test: 36611
Number of HSP's gapped (non-prelim): 29401
length of query: 362
length of database: 191,569,459
effective HSP length: 119
effective length of query: 243
effective length of database: 127,355,155
effective search space: 30947302665
effective search space used: 30947302665
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)