Your job contains 1 sequence.
>038576
MHLLALPSSLGLLQNLQTLSLDDCELGDMAIIGDLKKLVILALRGSDMEELAGEIGQLTQ
LRLLNLSKCFELKVIPPNVISSLSRLEELYIGQSPIQWGKVEGVDGERRNASLDELNNLS
KLTSLEILIQDEKTLPRDLSFFKMLQRYRILIGDSREYDAWDGISRISKLKLTNGANICL
NEGHIMQLKRIEDLTSGGDSEALYTSFKNVENGMEAMMRGINHRRELKQIFKQESSNAKD
LEKLSIFMCDNLTHLVPSSTSFQNLTTLTVWGCHGMINVLTSSTARSLVRLRQMTIKVCV
MITEIVADEDDEGDNYAAQDEIVFSELKELNLSNLQSLTSFSCSGNNCAFKFPSLERLVV
NRCPNMKIFSEGELSTPKLQKVQMSLVDEKLWAWDRDLNTTIQYVYLKIKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 038576
(411 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2131689 - symbol:AT4G27220 species:3702 "Arabi... 173 1.1e-09 1
TAIR|locus:2091662 - symbol:AT3G14460 species:3702 "Arabi... 121 7.3e-06 2
TAIR|locus:2136447 - symbol:AT4G27190 species:3702 "Arabi... 137 2.6e-05 2
TAIR|locus:2005517 - symbol:RPS2 "RESISTANT TO P. SYRINGA... 127 0.00012 1
TAIR|locus:2203881 - symbol:AT1G62630 species:3702 "Arabi... 120 0.00071 1
TAIR|locus:2163426 - symbol:TAO1 "target of AVRB operatio... 121 0.00077 1
WB|WBGene00022129 - symbol:lron-11 species:6239 "Caenorha... 117 0.00079 1
>TAIR|locus:2131689 [details] [associations]
symbol:AT4G27220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006952
EMBL:AL161566 eggNOG:COG4886 GO:GO:0043531 HOGENOM:HOG000091014
ProtClustDB:CLSN2686073 EMBL:AL030978 EMBL:DQ446872 IPI:IPI00548786
PIR:T05746 RefSeq:NP_194452.1 UniGene:At.65426
ProteinModelPortal:O81825 SMR:O81825 PRIDE:O81825
EnsemblPlants:AT4G27220.1 GeneID:828830 KEGG:ath:AT4G27220
TAIR:At4g27220 InParanoid:O81825 OMA:LAINIMA PhylomeDB:O81825
ArrayExpress:O81825 Genevestigator:O81825 Uniprot:O81825
Length = 919
Score = 173 (66.0 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 95/359 (26%), Positives = 155/359 (43%)
Query: 23 DCE-LGDMAIIGDLKKLVILALRGSDMEELAGEIGQLTQLRLLNLSKCFELKVIPPNVIS 81
+C+ L ++ + L KL L L S + EL + L+ LR + +S ++L+ IP I
Sbjct: 550 NCKKLRNLPSLESLVKLQFLDLHESAIRELPRGLEALSSLRYICVSNTYQLQSIPAGTIL 609
Query: 82 SLSRLEELYIGQSPIQWGKVEGVDGERRNASLDELNNLSKLTSLEILIQDEKTLPRDL-S 140
LS LE L + S WG ++G + E + A+LDE+ L L L I + D + + S
Sbjct: 610 QLSSLEVLDMAGSAYSWG-IKGEEREGQ-ATLDEVTCLPHLQFLAIKLLDVLSFSYEFDS 667
Query: 141 FFKMLQRYRILIGDSREYD---AWDGISRISKLKLTNGANICLNEGHI--MQLKRIEDLT 195
K L +++ L R +G IS + ++N A+I H+ + L E L
Sbjct: 668 LTKRLTKFQFLFSPIRSVSPPGTGEGCLAISDVNVSN-ASIGWLLQHVTSLDLNYCEGLN 726
Query: 196 SGGDSEALYTSFKNVENGMEAMMRGINHRRELKQIFKQESSNAKDLEKLSIFMCDNLT-H 254
G E L T K+ M+A+ L + + +LE+LS+ DN+
Sbjct: 727 --GMFENLVTKSKSSFVAMKALSIHYFPSLSLASGCESQLDLFPNLEELSL---DNVNLE 781
Query: 255 LVPSSTSF-----QNLTTLTVWGCHGMINVLTSST-ARSLVRLRQMTIKVCVMITEIVAD 308
+ F Q L L V GC + + + A +L L+++ + C+ + E+
Sbjct: 782 SIGELNGFLGMRLQKLKLLQVSGCRQLKRLFSDQILAGTLPNLQEIKVVSCLRLEELFNF 841
Query: 309 EDDEGDNYAAQDEIVFSELKELNLSNLQSLTSFSCSGNNCAFKFPSLERLVVNRCPNMK 367
D + A E + +L + L L L S C N SLE L V C ++K
Sbjct: 842 SSVPVD-FCA--ESLLPKLTVIKLKYLPQLRSL-C---NDRVVLESLEHLEVESCESLK 893
>TAIR|locus:2091662 [details] [associations]
symbol:AT3G14460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000767
InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0043531
InterPro:IPR025875 Pfam:PF12799 EMBL:AB028617 IPI:IPI00537428
RefSeq:NP_188064.1 UniGene:At.65087 ProteinModelPortal:Q9LRR5
SMR:Q9LRR5 PRIDE:Q9LRR5 EnsemblPlants:AT3G14460.1 GeneID:820669
KEGG:ath:AT3G14460 TAIR:At3g14460 eggNOG:NOG295903
HOGENOM:HOG000238375 InParanoid:Q9LRR5 OMA:AVISARY PhylomeDB:Q9LRR5
ProtClustDB:CLSN2684935 Genevestigator:Q9LRR5 GermOnline:AT3G14460
Uniprot:Q9LRR5
Length = 1424
Score = 121 (47.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 200 SEALYTS-FKNVENGMEAM-MRGINHRRELKQIFKQESSNAKDLEKLSIFMCDNLTHLVP 257
SEA+ S + + E ME + + I+H EL Q +L+ L I CD LT L
Sbjct: 1060 SEAIKPSQYDDDETDMEYLKVTDISHLMELPQ----------NLQSLHIDSCDGLTSLPE 1109
Query: 258 SST-SFQNLTTLTVWGCHGMINVLTS---STARSL-VR-LRQMTIKVCVMITEIVADED- 310
+ T S+ NL L + CH + + S +T ++L +R +++ + T + +
Sbjct: 1110 NLTESYPNLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKKLNFTESLQPTRSYSQLEY 1169
Query: 311 ----DEGDNYAAQDEIVFSELKELNLSNLQSLTSFSCSGNNCAFKFPSLERLVVNRCPNM 366
N +F +L+ L++ + +S +FS + +LE L + CPN+
Sbjct: 1170 LFIGSSCSNLVNFPLSLFPKLRSLSIRDCESFKTFSIHAGLGDDRI-ALESLEIRDCPNL 1228
Query: 367 KIFSEGELSTPKLQKVQMS 385
+ F +G L TPKL + +S
Sbjct: 1229 ETFPQGGLPTPKLSSMLLS 1247
Score = 68 (29.0 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 35 LKKLVILALRGSDMEELAGEIGQLTQLRLLNLSKCFELKVIPPNVISSLS-RLEELYIGQ 93
LK L L L + ++EL + L L+ L LS C +L +P ++ ++ RL +L +G
Sbjct: 595 LKLLRYLDLSSTKIKELPEFVCTLCNLQTLLLSNCRDLTSLPKSIAELINLRLLDL-VG- 652
Query: 94 SPIQWGKVEGVDGERRNASLDELNN 118
+P+ VE G ++ SL +L+N
Sbjct: 653 TPL----VEMPPGIKKLRSLQKLSN 673
>TAIR|locus:2136447 [details] [associations]
symbol:AT4G27190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 PROSITE:PS51450
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006952 EMBL:AL035680 EMBL:AL161566 GO:GO:0043531
GO:GO:0017111 eggNOG:KOG4658 EMBL:DQ446871 IPI:IPI00536711
PIR:T06049 RefSeq:NP_194449.1 UniGene:At.65425
ProteinModelPortal:Q9T048 SMR:Q9T048 PRIDE:Q9T048
EnsemblPlants:AT4G27190.1 GeneID:828827 KEGG:ath:AT4G27190
TAIR:At4g27190 HOGENOM:HOG000091014 InParanoid:Q9T048 OMA:WIMSSSQ
PhylomeDB:Q9T048 ProtClustDB:CLSN2686073 Genevestigator:Q9T048
Uniprot:Q9T048
Length = 985
Score = 137 (53.3 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 39/133 (29%), Positives = 74/133 (55%)
Query: 23 DC-ELGDMAIIGDLKKLVILALRGSDMEELAGEIGQLTQLRLLNLSKCFELKVIPPNVIS 81
DC +L + + L KL +L L G+ + E + +L + R L+LS+ L+ IP V+S
Sbjct: 583 DCFKLVKLPSLETLAKLELLDLCGTHILEFPRGLEELKRFRHLDLSRTLHLESIPARVVS 642
Query: 82 SLSRLEELYIGQSPIQWGKVEGVDGERRNASLDELNNLSKLTSLEILIQDEK-TLPRDLS 140
LS LE L + S +W V+G + ++ A+++E+ L +L L I + L + +
Sbjct: 643 RLSSLETLDMTSSHYRWS-VQG-ETQKGQATVEEIGCLQRLQVLSIRLHSSPFLLNKRNT 700
Query: 141 FFKMLQRYRILIG 153
+ K L+++++++G
Sbjct: 701 WIKRLKKFQLVVG 713
Score = 42 (19.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 225 RELKQIF-KQESSNAKDLEKLSIFMCDNLTHL 255
R+L+ + K+ +LE++ I CD+L +L
Sbjct: 847 RKLRTLLDKRNFLTIPNLEEIEISYCDSLQNL 878
>TAIR|locus:2005517 [details] [associations]
symbol:RPS2 "RESISTANT TO P. SYRINGAE 2" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006952 "defense response" evidence=ISS;TAS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0009626 "plant-type
hypersensitive response" evidence=IMP] [GO:0016045 "detection of
bacterium" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0042742 "defense response to bacterium" evidence=RCA;IMP]
[GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009595 "detection of
biotic stimulus" evidence=RCA] [GO:0009617 "response to bacterium"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009863
"salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0043900 "regulation of multi-organism process" evidence=RCA]
[GO:0045087 "innate immune response" evidence=RCA] [GO:0050776
"regulation of immune response" evidence=RCA] [GO:0050832 "defense
response to fungus" evidence=RCA] [GO:0051707 "response to other
organism" evidence=RCA] InterPro:IPR000767 InterPro:IPR002182
InterPro:IPR003593 Pfam:PF00931 PRINTS:PR00364 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0016045
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0042742
eggNOG:COG4886 GO:GO:0043531 EMBL:AL049483 GO:GO:0009626
GO:GO:0017111 UniGene:At.46720 UniGene:At.69675 EMBL:U14158
EMBL:U12860 EMBL:AF368301 EMBL:AF487797 EMBL:AF487798 EMBL:AF487799
EMBL:AF487800 EMBL:AF487801 EMBL:AF487802 EMBL:AF487803
EMBL:AF487804 EMBL:AF487805 EMBL:AF487806 EMBL:AF487807
EMBL:AF487808 EMBL:AF487809 EMBL:AF487810 EMBL:AF487811
EMBL:AF487812 EMBL:AF487813 EMBL:AF487814 EMBL:AF487815
EMBL:AF487816 EMBL:AF487817 EMBL:AF487818 EMBL:AF487819
EMBL:AF487820 EMBL:AF487821 EMBL:AF487822 EMBL:AF487823
EMBL:AK117214 EMBL:BT005972 EMBL:U97217 IPI:IPI00547830 PIR:A54809
RefSeq:NP_194339.1 UniGene:At.75226 PDB:2FT5 PDBsum:2FT5
ProteinModelPortal:Q42484 SMR:Q42484 DIP:DIP-53465N IntAct:Q42484
STRING:Q42484 EnsemblPlants:AT4G26090.1 GeneID:828715
KEGG:ath:AT4G26090 TAIR:At4g26090 InParanoid:Q42484 KO:K13459
OMA:AFNNDLE PhylomeDB:Q42484 ProtClustDB:CLSN2685902
Genevestigator:Q42484 GermOnline:AT4G26090 Uniprot:Q42484
Length = 909
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 79/320 (24%), Positives = 134/320 (41%)
Query: 104 VDGERRNASLDELNNLSKLTSLEIL-IQDEKTLPRD----LSFFKMLQRYRILIG----D 154
+ G + + EL NL KL L++ Q +T+PRD LS ++L Y G
Sbjct: 588 MSGTKISVLPQELGNLRKLKHLDLQRTQFLQTIPRDAICWLSKLEVLNLYYSYAGWELQS 647
Query: 155 SREYDAWD-GISRISKLK-LTNGANICLNEGHIMQL-------KRIEDLTSGGDSEALYT 205
E +A + G + + L+ LT L+ + L K I+ L +E LY
Sbjct: 648 FGEDEAEELGFADLEYLENLTTLGITVLSLETLKTLFEFGALHKHIQHLHVEECNELLYF 707
Query: 206 SFKNVEN-GMEAMMRGINHRRELKQIFKQ---ESSNAKDLEKLSIFMCDNLTHLVPSSTS 261
+ ++ N G I +L+ + E+ LE L++ NLT + +S S
Sbjct: 708 NLPSLTNHGRNLRRLSIKSCHDLEYLVTPADFENDWLPSLEVLTLHSLHNLTRVWGNSVS 767
Query: 262 ---FQNLTTLTVWGCHGMINVLTSSTARSLVRLRQMTIKVCVMITEIVADEDDEGDNYAA 318
+N+ + + C+ + NV S + L +L + + C I E++++ + +
Sbjct: 768 QDCLRNIRCINISHCNKLKNV---SWVQKLPKLEVIELFDCREIEELISEHESP----SV 820
Query: 319 QDEIVFSELKELNLSNLQSLTSFSCSGNNCAFKFPSLERLVVNRCPNMKIFSEGELSTPK 378
+D +F LK L +L L S S F F +E LV+ CP +K E T
Sbjct: 821 EDPTLFPSLKTLRTRDLPELNSILPS----RFSFQKVETLVITNCPRVKKLPFQERRTQ- 875
Query: 379 LQKVQMSLVDEKLW-AWDRD 397
+ +EK W A ++D
Sbjct: 876 -MNLPTVYCEEKWWKALEKD 894
>TAIR|locus:2203881 [details] [associations]
symbol:AT1G62630 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006952
GO:GO:0043531 EMBL:AC007190 InterPro:IPR025875 Pfam:PF12799
EMBL:AC005698 EMBL:U97220 IPI:IPI00529535 PIR:H96651
RefSeq:NP_176451.1 UniGene:At.52327 ProteinModelPortal:Q9SI85
SMR:Q9SI85 PaxDb:Q9SI85 PRIDE:Q9SI85 EnsemblPlants:AT1G62630.1
GeneID:842560 KEGG:ath:AT1G62630 TAIR:At1g62630 eggNOG:NOG277177
HOGENOM:HOG000238348 InParanoid:Q9SI85 OMA:WKHLMED PhylomeDB:Q9SI85
ProtClustDB:CLSN2682331 Genevestigator:Q9SI85 GermOnline:AT1G62630
Uniprot:Q9SI85
Length = 893
Score = 120 (47.3 bits), Expect = 0.00071, P = 0.00071
Identities = 70/277 (25%), Positives = 124/277 (44%)
Query: 110 NASLDEL-NNLSKLTSLEILIQDEKTLPRDLSFFKMLQRYRILIGDSREY----DAWDGI 164
N SL EL +S L SL+ L + R LS K +Q + +I + E+ ++ DGI
Sbjct: 580 NQSLFELPEEISNLVSLKYLNLSHTGI-RHLS--KGIQELKKIIHLNLEHTSKLESIDGI 636
Query: 165 SRISKLKLTN--GANICLNEGHIMQLKRIEDLTSGGDSEALYTSFKNVENGMEAMMRGIN 222
S + LK+ G+ + + + +L+ +E L E L T+ + R +
Sbjct: 637 SSLHNLKVLKLYGSRLPWDLNTVKELETLEHL------EILTTTIDPRAKQFLSSHR-LM 689
Query: 223 HRRELKQIFKQES-SNAKDLEKLSI---------FMCDNLTHL-VPSSTSFQNLTTLTVW 271
R L QIF S + LE LS+ MC +++ + + +F +L +T++
Sbjct: 690 SRSRLLQIFGSNIFSPDRQLESLSVSTDKLREFEIMCCSISEIKMGGICNFLSLVDVTIY 749
Query: 272 GCHGMINVLTSSTARSLVRLRQMTIKVCVMITEIVADEDD-EGDNYAAQDEIVFSELKEL 330
C G+ + A +LR +++ + +I+ +E EG++ + F ELK L
Sbjct: 750 NCEGLRELTFLIFAP---KLRSLSVVDAKDLEDIINEEKACEGEDSGI---VPFPELKYL 803
Query: 331 NLSNLQSLTSFSCSGNNCAFKFPSLERLVVNRCPNMK 367
NL +L L + F LE++ + CPN++
Sbjct: 804 NLDDLPKLKNIY----RRPLPFLCLEKITIGECPNLR 836
>TAIR|locus:2163426 [details] [associations]
symbol:TAO1 "target of AVRB operation1" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006952 "defense response" evidence=IEA;ISS] [GO:0007165
"signal transduction" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR000767 InterPro:IPR002182 Pfam:PF00931 Pfam:PF01582
PRINTS:PR00364 PROSITE:PS50104 SMART:SM00255 EMBL:CP002688
GO:GO:0007165 GO:GO:0042742 GO:GO:0043531 GO:GO:0005622
EMBL:AB017065 InterPro:IPR011713 Pfam:PF07725 SUPFAM:SSF52200
HOGENOM:HOG000064702 IPI:IPI00534020 RefSeq:NP_199264.1
UniGene:At.22810 ProteinModelPortal:Q9FI14 SMR:Q9FI14 PRIDE:Q9FI14
EnsemblPlants:AT5G44510.1 GeneID:834478 KEGG:ath:AT5G44510
TAIR:At5g44510 InParanoid:Q9FI14 OMA:ELPSSIW PhylomeDB:Q9FI14
ProtClustDB:CLSN2916724 ArrayExpress:Q9FI14 Genevestigator:Q9FI14
Uniprot:Q9FI14
Length = 1187
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 67/255 (26%), Positives = 112/255 (43%)
Query: 32 IGDLKKLVILAL-RGSDMEELAGEIGQLTQLRLLNLSKCFELKVIPPNVISSLSRLEELY 90
IG+L L L L R S + +L G +T L+ LNLS C L IP + I ++ L+++Y
Sbjct: 724 IGNLTNLKKLFLNRCSSLVKLPSSFGNVTSLKELNLSGCSSLLEIPSS-IGNIVNLKKVY 782
Query: 91 I-GQSPIQWGKVEGVDGERRNASLDELNNLSKLTSLEILIQDEKTLPR--DLSFFKMLQR 147
G S + V+ N +L EL+ L+ +SL L R DL+ L
Sbjct: 783 ADGCSSL----VQLPSSIGNNTNLKELHLLN-CSSLMECPSSMLNLTRLEDLNLSGCLSL 837
Query: 148 YRI-LIGDSREYDAWDGISRISKLKLTNGANICLNEGHIMQLKRIEDLTSGGDSEALY-- 204
++ IG+ + + L L++ +++ I ++ L G S L
Sbjct: 838 VKLPSIGN---------VINLQSLYLSDCSSLMELPFTIENATNLDTLYLDGCSNLLELP 888
Query: 205 TSFKNVENGMEAMMRGINHRRELKQIFKQESSNAKDLEKLSIFMCDNLTHLVPSSTSFQN 264
+S N+ N + G + +EL + + NA +L+ LS+ C +L L S N
Sbjct: 889 SSIWNITNLQSLYLNGCSSLKELPSLVE----NAINLQSLSLMKCSSLVELPSSIWRISN 944
Query: 265 LTTLTVWGCHGMINV 279
L+ L V C ++ +
Sbjct: 945 LSYLDVSNCSSLLEL 959
>WB|WBGene00022129 [details] [associations]
symbol:lron-11 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00700000104286 HSSP:P07359 EMBL:FO081276
EMBL:AF304125 RefSeq:NP_491035.1 UniGene:Cel.7069
ProteinModelPortal:G5EGE7 SMR:G5EGE7 EnsemblMetazoa:Y71F9B.8
GeneID:171837 KEGG:cel:CELE_Y71F9B.8 CTD:171837 WormBase:Y71F9B.8
OMA:AFVDNIN NextBio:872913 Uniprot:G5EGE7
Length = 542
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 65/233 (27%), Positives = 102/233 (43%)
Query: 31 IIGDLKKLVILALRGSDMEELAGE-IGQLTQLRLLNLSKCFELKVIPPNVISSLSRLEEL 89
+ LK L L + +D++ L E L+QL+ L+++ L +PP+V+ LS L L
Sbjct: 113 VFSKLKNLKTLIISSNDVQ-LGPECFAGLSQLQTLSIADN-RLSFLPPSVLKPLSGLRNL 170
Query: 90 YIGQSPIQWGKVEGVDGERRNASLDELNNLSKLTSLEI-LIQDEKTLPRDLSFFKMLQRY 148
+ + + ++ +L NL L+SLE + +K L K L
Sbjct: 171 DLSANKLLSMPASVMNNLGGLETLKLKQNL--LSSLETGMFLSQKEL-------KHLDVS 221
Query: 149 RILIGDSREYDAWDGISRISKLKLTNGANICLNEGHIMQLKRIEDLTSGGDSEALYTSFK 208
LIGD E A G+ ++ L LTN + L G+ L ++ L S L+ S +
Sbjct: 222 ENLIGDIEE-GALYGLEKLETLNLTNNQLVRL-PGNTWSLPALKTLDL---SSNLFVSLE 276
Query: 209 NVE-NGMEAMMR-GINHRRELKQIFKQESSNAKDLEKLSIFMCDNLTHLVPSS 259
+G+ A+ I+H R LK I L LSI LTH+ PS+
Sbjct: 277 TASFDGLPALQYLNISHSRNLKTIQMATFVQLSSLHWLSI-SSSALTHIHPSA 328
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 411 392 0.00095 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 615 (65 KB)
Total size of DFA: 236 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.99u 0.13s 34.12t Elapsed: 00:00:02
Total cpu time: 33.99u 0.13s 34.12t Elapsed: 00:00:02
Start: Sat May 11 13:05:08 2013 End: Sat May 11 13:05:10 2013