Query 038577
Match_columns 860
No_of_seqs 1174 out of 4588
Neff 11.4
Searched_HMMs 29240
Date Mon Mar 25 21:42:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymu_A WD-40 repeat protein; u 100.0 4.5E-69 1.5E-73 608.2 80.9 563 6-709 10-577 (577)
2 1nr0_A Actin interacting prote 100.0 1.8E-69 6.3E-74 610.4 72.8 565 17-710 23-609 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 1.1E-65 3.8E-70 580.5 79.4 529 44-712 8-539 (577)
4 1pgu_A Actin interacting prote 100.0 1.6E-62 5.4E-67 560.1 69.2 544 15-712 21-614 (615)
5 1nr0_A Actin interacting prote 100.0 5.5E-63 1.9E-67 557.7 64.4 521 14-611 61-610 (611)
6 3sfz_A APAF-1, apoptotic pepti 100.0 9.8E-64 3.3E-68 615.9 61.3 573 16-711 619-1248(1249)
7 3sfz_A APAF-1, apoptotic pepti 100.0 4.2E-60 1.4E-64 583.6 60.6 558 46-713 609-1208(1249)
8 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-57 3.7E-62 531.6 58.3 565 8-624 13-795 (902)
9 2oaj_A Protein SNI1; WD40 repe 100.0 6.8E-57 2.3E-61 524.9 60.1 524 49-619 14-739 (902)
10 1pgu_A Actin interacting prote 100.0 1.1E-56 3.9E-61 511.7 58.3 507 15-612 67-614 (615)
11 3mkq_A Coatomer beta'-subunit; 100.0 2E-48 6.9E-53 458.6 64.4 438 45-547 6-502 (814)
12 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-47 8.1E-52 449.5 50.9 438 88-609 7-502 (814)
13 3ow8_A WD repeat-containing pr 100.0 9.1E-42 3.1E-46 350.8 42.8 292 297-611 23-320 (321)
14 1vyh_C Platelet-activating fac 100.0 4.9E-42 1.7E-46 366.5 41.1 290 299-611 101-410 (410)
15 1got_B GT-beta; complex (GTP-b 100.0 8.5E-41 2.9E-45 347.7 45.5 293 133-505 47-340 (340)
16 1vyh_C Platelet-activating fac 100.0 2.5E-41 8.6E-46 361.0 41.1 288 258-548 102-409 (410)
17 1got_B GT-beta; complex (GTP-b 100.0 2.2E-40 7.5E-45 344.6 45.5 290 296-609 45-340 (340)
18 1k32_A Tricorn protease; prote 100.0 1E-39 3.6E-44 391.1 57.8 525 2-614 2-639 (1045)
19 2ynn_A Coatomer subunit beta'; 100.0 2.8E-40 9.5E-45 337.8 43.6 291 257-550 6-302 (304)
20 4g56_B MGC81050 protein; prote 100.0 8.8E-42 3E-46 356.8 32.3 321 18-382 11-345 (357)
21 2ynn_A Coatomer subunit beta'; 100.0 4.9E-40 1.7E-44 336.0 44.2 294 297-613 4-303 (304)
22 1r5m_A SIR4-interacting protei 100.0 1.1E-40 3.8E-45 360.9 41.6 339 33-421 26-424 (425)
23 3ow8_A WD repeat-containing pr 100.0 2.9E-40 9.8E-45 339.6 42.5 288 259-549 27-320 (321)
24 4g56_B MGC81050 protein; prote 100.0 1.3E-40 4.4E-45 348.0 38.3 327 97-553 9-346 (357)
25 2pbi_B Guanine nucleotide-bind 100.0 1.7E-39 5.7E-44 339.4 44.0 296 133-505 56-354 (354)
26 2pbi_B Guanine nucleotide-bind 100.0 1.9E-39 6.4E-44 338.9 43.8 290 297-609 55-354 (354)
27 1r5m_A SIR4-interacting protei 100.0 8.7E-40 3E-44 353.9 41.6 326 262-611 43-424 (425)
28 3iz6_a 40S ribosomal protein R 100.0 4.5E-41 1.5E-45 355.6 30.0 313 31-382 45-377 (380)
29 4gqb_B Methylosome protein 50; 100.0 5.4E-40 1.9E-44 339.6 37.2 304 34-382 16-333 (344)
30 3iz6_a 40S ribosomal protein R 100.0 1.5E-40 5.2E-45 351.5 32.3 309 288-614 48-377 (380)
31 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-39 8.8E-44 337.1 40.9 304 44-387 7-342 (345)
32 3frx_A Guanine nucleotide-bind 100.0 7.4E-39 2.5E-43 329.5 42.9 299 297-613 8-318 (319)
33 4gqb_B Methylosome protein 50; 100.0 2E-39 6.8E-44 335.4 38.2 287 262-553 28-334 (344)
34 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.7E-39 3.3E-43 332.7 43.0 305 131-513 5-340 (345)
35 1k32_A Tricorn protease; prote 100.0 2.5E-37 8.6E-42 370.5 61.0 534 51-714 13-639 (1045)
36 1gxr_A ESG1, transducin-like e 100.0 5E-39 1.7E-43 335.8 40.0 320 264-610 9-335 (337)
37 3frx_A Guanine nucleotide-bind 100.0 7E-38 2.4E-42 322.2 46.6 297 131-509 7-318 (319)
38 2xzm_R RACK1; ribosome, transl 100.0 2E-38 6.9E-43 330.5 42.7 305 297-614 12-342 (343)
39 4ery_A WD repeat-containing pr 100.0 2.7E-38 9.2E-43 325.5 42.8 291 257-549 16-311 (312)
40 1erj_A Transcriptional repress 100.0 2.5E-38 8.5E-43 336.2 43.6 285 304-613 62-390 (393)
41 2pm9_A Protein WEB1, protein t 100.0 8.8E-41 3E-45 360.3 22.7 345 266-613 14-415 (416)
42 4ery_A WD repeat-containing pr 100.0 1.1E-37 3.7E-42 321.0 43.2 293 296-611 13-311 (312)
43 2pm9_A Protein WEB1, protein t 100.0 1.8E-40 6.3E-45 357.9 22.5 342 51-423 11-415 (416)
44 2hes_X YDR267CP; beta-propelle 100.0 9.1E-38 3.1E-42 323.1 41.4 303 41-422 3-328 (330)
45 1gxr_A ESG1, transducin-like e 100.0 1.5E-37 5.3E-42 324.5 43.4 327 140-507 8-336 (337)
46 1erj_A Transcriptional repress 100.0 6.5E-38 2.2E-42 333.0 40.6 289 87-423 58-390 (393)
47 2hes_X YDR267CP; beta-propelle 100.0 1.9E-37 6.6E-42 320.7 42.2 293 295-612 3-328 (330)
48 3vl1_A 26S proteasome regulato 100.0 1.1E-37 3.8E-42 336.4 39.9 331 267-612 59-419 (420)
49 4aow_A Guanine nucleotide-bind 100.0 5.9E-37 2E-41 320.4 44.0 306 294-614 26-339 (340)
50 3vl1_A 26S proteasome regulato 100.0 5.6E-38 1.9E-42 338.7 35.4 344 143-550 58-419 (420)
51 2xzm_R RACK1; ribosome, transl 100.0 1.5E-36 5.1E-41 316.4 42.5 297 181-509 13-341 (343)
52 3zwl_B Eukaryotic translation 100.0 3.6E-36 1.2E-40 318.6 43.7 297 297-617 23-351 (369)
53 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-35 5.4E-40 321.4 48.6 325 258-613 112-443 (445)
54 2j04_B YDR362CP, TAU91; beta p 100.0 3.5E-38 1.2E-42 342.3 26.4 371 83-509 123-518 (524)
55 4aow_A Guanine nucleotide-bind 100.0 3E-35 1E-39 307.5 47.0 298 132-510 29-339 (340)
56 1sq9_A Antiviral protein SKI8; 100.0 2.1E-36 7.1E-41 323.8 37.2 307 298-614 8-397 (397)
57 2j04_B YDR362CP, TAU91; beta p 100.0 7.9E-38 2.7E-42 339.5 26.2 314 273-613 170-518 (524)
58 3gre_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 332.5 31.9 384 99-547 33-437 (437)
59 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-35 1.5E-39 317.9 46.8 322 134-509 111-443 (445)
60 3dm0_A Maltose-binding peripla 100.0 1.6E-35 5.4E-40 340.0 43.5 310 298-611 374-692 (694)
61 3v7d_B Cell division control p 100.0 8.4E-35 2.9E-39 318.0 46.6 289 298-617 113-426 (464)
62 1k8k_C P40, ARP2/3 complex 41 100.0 9.6E-36 3.3E-40 315.6 37.6 311 302-615 4-364 (372)
63 3gre_A Serine/threonine-protei 100.0 2.1E-36 7E-41 328.0 32.9 360 148-609 34-437 (437)
64 3v7d_B Cell division control p 100.0 9.1E-35 3.1E-39 317.8 46.1 319 258-609 115-460 (464)
65 3i2n_A WD repeat-containing pr 100.0 8E-36 2.7E-40 314.3 35.7 313 300-615 12-356 (357)
66 1sq9_A Antiviral protein SKI8; 100.0 1.9E-35 6.7E-40 316.2 37.6 292 256-552 8-397 (397)
67 3zwl_B Eukaryotic translation 100.0 6.4E-35 2.2E-39 309.0 39.9 298 257-559 25-355 (369)
68 3ei3_B DNA damage-binding prot 100.0 3.5E-35 1.2E-39 312.1 36.4 293 293-612 60-382 (383)
69 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-34 7.2E-39 297.2 41.0 291 257-559 11-305 (313)
70 3odt_A Protein DOA1; ubiquitin 100.0 2.6E-34 9E-39 296.4 41.1 292 295-619 7-303 (313)
71 3k26_A Polycomb protein EED; W 100.0 1.2E-35 4.1E-40 314.2 31.5 289 302-612 14-366 (366)
72 3dm0_A Maltose-binding peripla 100.0 3.8E-34 1.3E-38 328.4 45.1 295 132-507 373-692 (694)
73 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-34 5.4E-39 306.2 37.3 287 262-552 6-363 (372)
74 3k26_A Polycomb protein EED; W 100.0 7.8E-35 2.7E-39 307.9 33.8 287 260-550 14-366 (366)
75 4a11_B DNA excision repair pro 100.0 1.3E-34 4.3E-39 311.4 35.3 358 161-550 21-405 (408)
76 4a11_B DNA excision repair pro 100.0 4.8E-35 1.6E-39 314.7 32.0 357 31-422 22-405 (408)
77 3dwl_C Actin-related protein 2 100.0 1E-35 3.5E-40 315.8 26.2 306 301-610 6-377 (377)
78 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-36 4.7E-41 317.9 18.3 317 186-600 12-349 (588)
79 3ei3_B DNA damage-binding prot 100.0 4.1E-34 1.4E-38 303.9 37.9 283 259-550 68-382 (383)
80 4aez_A CDC20, WD repeat-contai 100.0 6.3E-34 2.2E-38 303.8 39.3 284 309-619 96-387 (401)
81 4gga_A P55CDC, cell division c 100.0 1.5E-33 5.1E-38 302.8 42.4 300 16-398 109-413 (420)
82 4h5i_A Guanine nucleotide-exch 100.0 1.7E-34 5.9E-39 302.3 33.4 305 188-551 13-344 (365)
83 4e54_B DNA damage-binding prot 100.0 7.6E-36 2.6E-40 322.1 23.8 309 134-511 112-433 (435)
84 3i2n_A WD repeat-containing pr 100.0 5.2E-34 1.8E-38 300.4 36.8 291 92-424 17-355 (357)
85 4e54_B DNA damage-binding prot 100.0 2.8E-35 9.4E-40 317.7 26.7 296 47-384 114-434 (435)
86 2j04_A TAU60, YPL007P, hypothe 100.0 5.9E-36 2E-40 313.2 20.1 318 92-496 14-349 (588)
87 4gga_A P55CDC, cell division c 100.0 2.9E-33 9.8E-38 300.5 38.8 283 308-617 107-400 (420)
88 2pm7_B Protein transport prote 100.0 2.3E-33 7.7E-38 285.5 35.0 248 344-611 4-284 (297)
89 3dw8_B Serine/threonine-protei 100.0 2.5E-33 8.6E-38 305.1 37.0 329 347-710 26-444 (447)
90 4aez_A CDC20, WD repeat-contai 100.0 5.4E-33 1.9E-37 296.6 38.2 284 267-558 96-388 (401)
91 3dwl_C Actin-related protein 2 100.0 4.2E-35 1.4E-39 311.0 21.7 281 263-548 10-377 (377)
92 4ggc_A P55CDC, cell division c 100.0 3.8E-32 1.3E-36 280.9 40.3 278 309-613 28-316 (318)
93 2pm7_B Protein transport prote 100.0 5.8E-33 2E-37 282.5 33.0 248 300-549 3-284 (297)
94 4h5i_A Guanine nucleotide-exch 100.0 8.4E-33 2.9E-37 289.5 34.7 297 141-467 14-344 (365)
95 4ggc_A P55CDC, cell division c 100.0 4.7E-32 1.6E-36 280.2 39.9 279 96-423 28-316 (318)
96 1yfq_A Cell cycle arrest prote 100.0 1.6E-32 5.4E-37 287.0 35.9 278 302-609 7-321 (342)
97 3f3f_A Nucleoporin SEH1; struc 100.0 1.2E-32 4E-37 289.2 34.4 298 301-620 6-345 (351)
98 3dw8_B Serine/threonine-protei 100.0 1.6E-32 5.6E-37 298.6 35.8 300 305-610 27-444 (447)
99 1p22_A F-BOX/WD-repeat protein 100.0 3.4E-32 1.2E-36 293.9 36.2 277 305-617 132-419 (435)
100 1p22_A F-BOX/WD-repeat protein 100.0 6.1E-32 2.1E-36 291.9 37.0 280 262-558 131-422 (435)
101 3bg1_A Protein SEC13 homolog; 100.0 4.7E-33 1.6E-37 285.8 26.5 245 345-611 9-292 (316)
102 3jrp_A Fusion protein of prote 100.0 9.9E-32 3.4E-36 285.6 37.2 262 341-619 3-294 (379)
103 1yfq_A Cell cycle arrest prote 100.0 6E-32 2.1E-36 282.6 35.0 278 261-547 8-321 (342)
104 3f3f_A Nucleoporin SEH1; struc 100.0 4.3E-32 1.5E-36 284.9 33.0 311 45-387 4-344 (351)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-32 4.2E-37 294.2 28.0 286 310-616 38-346 (402)
106 3jrp_A Fusion protein of prote 100.0 2.3E-31 7.8E-36 282.8 37.2 254 297-552 2-289 (379)
107 3bg1_A Protein SEC13 homolog; 100.0 2.3E-32 8E-37 280.6 28.1 247 301-549 8-292 (316)
108 3bws_A Protein LP49; two-domai 100.0 2.1E-30 7.2E-35 280.5 44.6 298 287-612 102-432 (433)
109 3mmy_A MRNA export factor; mRN 100.0 1.5E-31 5.1E-36 282.9 34.0 293 37-378 24-344 (368)
110 3mmy_A MRNA export factor; mRN 100.0 8.9E-32 3E-36 284.7 31.9 292 292-610 25-344 (368)
111 3vu4_A KMHSV2; beta-propeller 100.0 7.6E-31 2.6E-35 273.9 35.1 310 290-614 3-338 (355)
112 1l0q_A Surface layer protein; 100.0 2.5E-29 8.6E-34 268.0 45.3 325 278-615 4-345 (391)
113 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.9E-30 1.7E-34 278.1 36.7 279 307-611 5-390 (450)
114 3bws_A Protein LP49; two-domai 100.0 3E-29 1E-33 271.4 42.9 322 51-422 59-432 (433)
115 2aq5_A Coronin-1A; WD40 repeat 100.0 5.5E-31 1.9E-35 281.4 28.3 284 266-553 36-345 (402)
116 2w18_A PALB2, fancn, partner a 100.0 2.4E-29 8.3E-34 246.5 36.8 304 133-548 27-355 (356)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-29 3.7E-34 275.4 37.6 281 265-549 5-390 (450)
118 1l0q_A Surface layer protein; 100.0 8.4E-29 2.9E-33 263.9 43.1 277 319-623 2-286 (391)
119 1nir_A Nitrite reductase; hemo 100.0 2.6E-29 9E-34 275.4 39.2 344 271-630 144-532 (543)
120 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-29 4.4E-34 264.6 34.5 305 78-467 3-337 (355)
121 2xyi_A Probable histone-bindin 100.0 1.6E-29 5.4E-34 272.0 34.8 312 87-423 39-411 (430)
122 4gq1_A NUP37; propeller, trans 100.0 6.9E-31 2.4E-35 278.5 23.8 348 54-507 17-388 (393)
123 2xyi_A Probable histone-bindin 100.0 1.3E-29 4.6E-34 272.5 33.3 251 343-614 122-412 (430)
124 3jro_A Fusion protein of prote 100.0 2.1E-30 7.2E-35 298.4 27.5 251 300-552 3-287 (753)
125 2w18_A PALB2, fancn, partner a 100.0 4.5E-29 1.6E-33 244.6 32.4 281 267-610 42-355 (356)
126 3jro_A Fusion protein of prote 100.0 9.3E-31 3.2E-35 301.4 23.6 256 134-425 2-288 (753)
127 3lrv_A PRE-mRNA-splicing facto 100.0 6.6E-30 2.2E-34 266.3 27.3 267 314-612 44-333 (343)
128 1nir_A Nitrite reductase; hemo 100.0 5.5E-28 1.9E-32 264.9 38.4 328 197-561 145-525 (543)
129 4gq1_A NUP37; propeller, trans 100.0 1.9E-29 6.3E-34 267.5 23.9 255 315-610 98-387 (393)
130 3lrv_A PRE-mRNA-splicing facto 100.0 8.9E-29 3E-33 257.7 27.6 266 271-548 43-331 (343)
131 2ecf_A Dipeptidyl peptidase IV 100.0 1.1E-26 3.9E-31 269.6 34.0 324 264-613 36-460 (741)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.3E-26 4.5E-31 246.7 31.2 300 52-404 62-410 (415)
133 2ecf_A Dipeptidyl peptidase IV 100.0 2.5E-26 8.7E-31 266.6 35.0 320 52-421 36-458 (741)
134 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.4E-26 1.1E-30 243.6 33.0 293 18-362 68-410 (415)
135 1xfd_A DIP, dipeptidyl aminope 100.0 2.2E-26 7.5E-31 266.5 30.0 347 15-411 19-429 (723)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-25 4.3E-30 259.1 34.9 320 17-382 30-437 (706)
137 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-25 3.8E-30 260.6 29.5 368 143-558 18-451 (723)
138 2z3z_A Dipeptidyl aminopeptida 99.9 3.7E-24 1.3E-28 246.8 34.9 317 54-424 27-437 (706)
139 3u4y_A Uncharacterized protein 99.9 1.1E-23 3.8E-28 218.4 35.2 287 312-615 3-307 (331)
140 3vgz_A Uncharacterized protein 99.9 6.4E-23 2.2E-27 215.0 37.8 273 265-541 41-335 (353)
141 3u4y_A Uncharacterized protein 99.9 5.3E-23 1.8E-27 213.4 35.1 279 271-552 4-306 (331)
142 1z68_A Fibroblast activation p 99.9 2.5E-24 8.6E-29 248.6 26.6 329 17-387 20-450 (719)
143 1pby_B Quinohemoprotein amine 99.9 3.1E-23 1.1E-27 215.9 32.3 277 277-561 2-321 (337)
144 3vgz_A Uncharacterized protein 99.9 1.2E-22 4E-27 213.1 36.8 271 307-603 41-335 (353)
145 1ri6_A Putative isomerase YBHE 99.9 1.1E-22 3.9E-27 212.2 35.2 273 278-553 6-313 (343)
146 1ri6_A Putative isomerase YBHE 99.9 3.7E-22 1.3E-26 208.3 38.4 300 65-404 5-335 (343)
147 1pby_B Quinohemoprotein amine 99.9 5.6E-23 1.9E-27 213.9 30.1 273 320-622 3-320 (337)
148 2ojh_A Uncharacterized protein 99.9 1.3E-22 4.3E-27 206.9 27.5 257 70-371 18-293 (297)
149 2ojh_A Uncharacterized protein 99.9 2.3E-22 8E-27 205.0 28.8 251 31-329 21-294 (297)
150 4a5s_A Dipeptidyl peptidase 4 99.9 7.2E-22 2.5E-26 227.5 34.1 365 16-427 20-454 (740)
151 1z68_A Fibroblast activation p 99.9 1.2E-22 4.2E-27 234.5 26.7 364 56-474 19-451 (719)
152 3hfq_A Uncharacterized protein 99.9 1.1E-20 3.6E-25 197.3 36.2 270 285-555 15-324 (347)
153 4a5s_A Dipeptidyl peptidase 4 99.9 1.7E-20 5.6E-25 216.2 40.0 365 52-474 16-457 (740)
154 1jmx_B Amine dehydrogenase; ox 99.9 7.5E-21 2.6E-25 198.9 31.7 272 312-622 5-335 (349)
155 3hfq_A Uncharacterized protein 99.9 2E-20 6.7E-25 195.2 34.5 266 329-616 16-323 (347)
156 1jmx_B Amine dehydrogenase; ox 99.9 7.1E-21 2.4E-25 199.1 30.9 284 270-560 5-335 (349)
157 3o4h_A Acylamino-acid-releasin 99.9 1.3E-21 4.4E-26 219.6 26.5 270 306-612 21-315 (582)
158 3scy_A Hypothetical bacterial 99.9 3.7E-19 1.3E-23 186.7 39.8 295 32-358 27-360 (361)
159 3scy_A Hypothetical bacterial 99.9 1E-19 3.5E-24 190.9 35.6 279 276-556 13-345 (361)
160 3o4h_A Acylamino-acid-releasin 99.9 5.8E-21 2E-25 214.3 25.2 244 349-616 21-278 (582)
161 3pe7_A Oligogalacturonate lyas 99.9 3.8E-20 1.3E-24 196.6 28.1 295 35-378 13-380 (388)
162 3pe7_A Oligogalacturonate lyas 99.9 3.5E-20 1.2E-24 196.9 26.3 307 291-610 15-380 (388)
163 2oiz_A Aromatic amine dehydrog 99.8 1.4E-18 4.8E-23 180.6 33.0 302 22-362 14-360 (361)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.2E-18 4.1E-23 182.5 31.3 264 329-613 14-342 (365)
165 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.4E-18 1.5E-22 178.2 34.6 274 32-339 14-342 (365)
166 2oit_A Nucleoporin 214KDA; NH2 99.8 1.3E-18 4.5E-23 185.3 30.5 266 30-337 21-332 (434)
167 2oiz_A Aromatic amine dehydrog 99.8 7.2E-18 2.5E-22 175.2 35.2 298 62-404 13-360 (361)
168 1qks_A Cytochrome CD1 nitrite 99.8 4.6E-17 1.6E-21 177.3 41.7 334 274-623 165-549 (567)
169 3c5m_A Oligogalacturonate lyas 99.8 1.7E-18 5.7E-23 184.6 27.2 299 35-384 13-388 (396)
170 3c5m_A Oligogalacturonate lyas 99.8 4.5E-19 1.5E-23 189.0 21.8 310 290-614 14-386 (396)
171 2oit_A Nucleoporin 214KDA; NH2 99.8 1.1E-18 3.9E-23 185.8 21.8 220 371-613 23-279 (434)
172 1qks_A Cytochrome CD1 nitrite 99.8 6.9E-16 2.4E-20 168.0 42.9 323 208-561 169-549 (567)
173 1q7f_A NHL, brain tumor CG1071 99.8 2.5E-16 8.6E-21 158.8 32.7 242 347-613 27-281 (286)
174 2gop_A Trilobed protease; beta 99.8 1.9E-16 6.4E-21 165.1 31.5 264 17-350 19-341 (347)
175 3azo_A Aminopeptidase; POP fam 99.8 2.3E-17 7.9E-22 188.4 26.7 296 259-559 18-378 (662)
176 3azo_A Aminopeptidase; POP fam 99.8 5.1E-17 1.8E-21 185.6 28.2 325 136-505 18-408 (662)
177 2gop_A Trilobed protease; beta 99.8 3E-16 1E-20 163.5 31.6 268 266-560 16-339 (347)
178 3fvz_A Peptidyl-glycine alpha- 99.8 3.7E-16 1.3E-20 160.7 29.8 244 349-612 23-322 (329)
179 4a2l_A BT_4663, two-component 99.7 1.5E-11 5E-16 142.9 69.4 514 22-614 53-616 (795)
180 2dg1_A DRP35, lactonase; beta 99.7 1.4E-15 4.7E-20 157.4 30.0 277 307-603 6-301 (333)
181 4a2l_A BT_4663, two-component 99.7 3.4E-12 1.2E-16 148.2 61.2 513 18-611 93-658 (795)
182 3fvz_A Peptidyl-glycine alpha- 99.7 1.9E-15 6.3E-20 155.4 29.3 241 307-549 24-321 (329)
183 3dsm_A Uncharacterized protein 99.7 5E-15 1.7E-19 151.8 32.2 268 328-622 16-311 (328)
184 2xdw_A Prolyl endopeptidase; a 99.7 9.1E-15 3.1E-19 167.6 37.8 276 274-552 81-416 (710)
185 2xdw_A Prolyl endopeptidase; a 99.7 5E-15 1.7E-19 169.8 35.4 277 316-614 81-416 (710)
186 3sjl_D Methylamine dehydrogena 99.7 4.2E-15 1.4E-19 150.6 30.5 282 312-622 38-373 (386)
187 3dsm_A Uncharacterized protein 99.7 1E-14 3.4E-19 149.5 33.9 268 284-561 15-312 (328)
188 3sjl_D Methylamine dehydrogena 99.7 4.8E-15 1.6E-19 150.2 30.4 284 270-561 38-374 (386)
189 2mad_H Methylamine dehydrogena 99.7 2.9E-14 1E-18 147.7 37.2 275 314-619 28-357 (373)
190 1q7f_A NHL, brain tumor CG1071 99.7 2E-14 6.8E-19 144.9 34.6 242 262-509 27-281 (286)
191 2z2n_A Virginiamycin B lyase; 99.7 1.3E-13 4.5E-18 140.0 39.6 281 262-552 12-297 (299)
192 2dg1_A DRP35, lactonase; beta 99.7 4.4E-15 1.5E-19 153.6 28.9 268 266-541 7-301 (333)
193 2z2n_A Virginiamycin B lyase; 99.7 1.3E-13 4.5E-18 140.0 39.1 281 305-614 13-297 (299)
194 3e5z_A Putative gluconolactona 99.7 8.6E-15 2.9E-19 148.3 28.5 241 345-614 23-288 (296)
195 3no2_A Uncharacterized protein 99.7 2E-14 6.8E-19 142.4 30.0 244 360-623 4-263 (276)
196 2mad_H Methylamine dehydrogena 99.7 1.9E-13 6.4E-18 141.6 37.6 276 272-557 28-357 (373)
197 3v9f_A Two-component system se 99.7 3.8E-10 1.3E-14 130.7 69.3 523 22-614 29-613 (781)
198 3e5z_A Putative gluconolactona 99.7 2.5E-14 8.6E-19 144.8 29.5 243 300-553 21-289 (296)
199 3c75_H MADH, methylamine dehyd 99.7 9E-15 3.1E-19 151.4 26.1 275 316-619 82-409 (426)
200 2bkl_A Prolyl endopeptidase; m 99.7 7.6E-15 2.6E-19 167.7 26.3 278 22-341 78-400 (695)
201 1rwi_B Serine/threonine-protei 99.7 2E-14 7E-19 143.5 24.8 242 351-615 25-267 (270)
202 2bkl_A Prolyl endopeptidase; m 99.7 3E-14 1E-18 162.7 29.3 274 273-553 76-400 (695)
203 3c75_H MADH, methylamine dehyd 99.6 8.3E-14 2.8E-18 144.2 29.2 276 274-557 82-409 (426)
204 3v9f_A Two-component system se 99.6 4.9E-10 1.7E-14 129.8 63.3 539 18-611 71-655 (781)
205 3no2_A Uncharacterized protein 99.6 1.1E-13 3.6E-18 137.1 27.6 235 321-562 7-264 (276)
206 1rwi_B Serine/threonine-protei 99.6 7E-14 2.4E-18 139.6 25.9 243 308-553 25-267 (270)
207 2qc5_A Streptogramin B lactona 99.6 2.9E-12 1E-16 130.0 37.4 277 262-549 17-299 (300)
208 1yr2_A Prolyl oligopeptidase; 99.6 1.8E-13 6.3E-18 157.4 31.3 277 22-340 117-443 (741)
209 2qc5_A Streptogramin B lactona 99.6 3.8E-12 1.3E-16 129.2 37.4 275 306-610 19-298 (300)
210 1yr2_A Prolyl oligopeptidase; 99.6 2.9E-13 1E-17 155.6 31.2 275 273-552 115-443 (741)
211 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 4.1E-12 1.4E-16 129.9 31.2 240 349-612 17-299 (314)
212 1mda_H Methylamine dehydrogena 99.6 2.8E-13 9.5E-18 138.1 21.4 267 319-622 32-356 (368)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 7.8E-12 2.7E-16 127.8 30.6 242 52-338 17-299 (314)
214 4a0p_A LRP6, LRP-6, low-densit 99.5 1.2E-07 4.3E-12 104.6 64.7 522 23-620 6-557 (628)
215 3g4e_A Regucalcin; six bladed 99.5 5E-11 1.7E-15 120.2 33.7 236 53-327 13-262 (297)
216 3g4e_A Regucalcin; six bladed 99.5 5.8E-11 2E-15 119.7 33.6 230 306-540 12-262 (297)
217 3hrp_A Uncharacterized protein 99.5 3.7E-11 1.3E-15 126.4 32.9 250 350-610 131-408 (409)
218 1kb0_A Quinohemoprotein alcoho 99.5 7.9E-12 2.7E-16 140.4 28.6 280 276-562 77-519 (677)
219 3q7m_A Lipoprotein YFGL, BAMB; 99.5 5.7E-11 2E-15 124.7 33.4 302 275-609 52-375 (376)
220 3hrp_A Uncharacterized protein 99.5 5.7E-11 2E-15 125.0 32.1 236 307-548 131-408 (409)
221 1mda_H Methylamine dehydrogena 99.5 4.3E-12 1.5E-16 129.3 22.0 259 287-562 47-358 (368)
222 3s94_A LRP-6, low-density lipo 99.5 1.4E-07 4.9E-12 104.0 59.3 476 25-552 11-553 (619)
223 1yiq_A Quinohemoprotein alcoho 99.5 2E-11 7E-16 137.3 28.8 283 276-562 70-517 (689)
224 3dr2_A Exported gluconolactona 99.4 2.4E-11 8.1E-16 123.2 26.0 227 347-604 42-299 (305)
225 1yiq_A Quinohemoprotein alcoho 99.4 2.8E-11 9.6E-16 136.2 27.4 281 318-623 70-516 (689)
226 3iuj_A Prolyl endopeptidase; h 99.4 7.1E-11 2.4E-15 134.3 29.3 240 307-553 129-408 (693)
227 3s94_A LRP-6, low-density lipo 99.4 3E-07 1E-11 101.5 57.0 471 73-614 17-553 (619)
228 1kb0_A Quinohemoprotein alcoho 99.4 1.6E-10 5.6E-15 129.7 31.6 303 208-536 79-536 (677)
229 2ghs_A AGR_C_1268P; regucalcin 99.4 5.4E-10 1.9E-14 114.1 32.9 222 352-601 51-291 (326)
230 2ghs_A AGR_C_1268P; regucalcin 99.4 7.1E-10 2.4E-14 113.2 33.5 224 308-540 50-292 (326)
231 3iuj_A Prolyl endopeptidase; h 99.4 3.2E-11 1.1E-15 137.1 25.9 243 348-615 127-408 (693)
232 2qe8_A Uncharacterized protein 99.4 6.1E-11 2.1E-15 122.2 25.6 236 350-605 17-314 (343)
233 2ece_A 462AA long hypothetical 99.4 5.7E-10 1.9E-14 113.4 31.2 223 315-538 90-399 (462)
234 3q7m_A Lipoprotein YFGL, BAMB; 99.4 6.5E-10 2.2E-14 116.6 33.3 301 208-547 55-375 (376)
235 1xip_A Nucleoporin NUP159; bet 99.4 1.3E-11 4.5E-16 125.8 18.4 182 393-599 39-231 (388)
236 3dr2_A Exported gluconolactona 99.4 2.2E-10 7.4E-15 116.1 26.6 237 300-547 38-303 (305)
237 1fwx_A Nitrous oxide reductase 99.3 1.9E-10 6.6E-15 121.3 25.3 272 279-554 18-435 (595)
238 2ece_A 462AA long hypothetical 99.3 1.5E-09 5.1E-14 110.4 30.3 235 359-600 93-399 (462)
239 1xip_A Nucleoporin NUP159; bet 99.3 3.9E-11 1.3E-15 122.4 18.7 170 15-213 40-232 (388)
240 2qe8_A Uncharacterized protein 99.3 5.9E-11 2E-15 122.4 20.2 265 265-546 17-317 (343)
241 4a0p_A LRP6, LRP-6, low-densit 99.3 3.7E-06 1.3E-10 92.8 64.3 464 17-512 41-553 (628)
242 3hxj_A Pyrrolo-quinoline quino 99.3 2.9E-11 1E-15 124.6 15.8 299 272-613 27-325 (330)
243 1fwx_A Nitrous oxide reductase 99.3 5.2E-10 1.8E-14 118.1 24.1 237 364-612 18-361 (595)
244 1npe_A Nidogen, entactin; glyc 99.2 3.6E-08 1.2E-12 97.4 33.6 251 277-532 2-263 (267)
245 3hxj_A Pyrrolo-quinoline quino 99.2 9.1E-11 3.1E-15 120.8 14.6 302 55-422 22-324 (330)
246 1kv9_A Type II quinohemoprotei 99.2 3.2E-09 1.1E-13 119.2 27.1 282 276-562 66-500 (668)
247 1npe_A Nidogen, entactin; glyc 99.2 1.2E-07 4.1E-12 93.6 35.3 237 362-622 2-248 (267)
248 2hz6_A Endoplasmic reticulum t 99.2 7.7E-12 2.6E-16 129.9 5.0 191 360-560 8-202 (369)
249 1kv9_A Type II quinohemoprotei 99.2 6E-09 2.1E-13 116.9 28.8 280 318-623 66-499 (668)
250 2iwa_A Glutamine cyclotransfer 99.2 1.1E-08 3.8E-13 97.9 26.3 219 382-613 10-238 (266)
251 2ad6_A Methanol dehydrogenase 99.1 2.7E-08 9.1E-13 109.2 30.4 280 276-562 62-506 (571)
252 1w6s_A Methanol dehydrogenase 99.1 5.4E-08 1.8E-12 106.3 30.0 282 276-562 62-515 (599)
253 2hz6_A Endoplasmic reticulum t 99.1 1.8E-11 6.3E-16 127.0 2.6 189 402-621 8-201 (369)
254 1flg_A Protein (quinoprotein e 99.1 1.4E-07 4.9E-12 103.4 33.3 282 276-562 68-528 (582)
255 1w6s_A Methanol dehydrogenase 99.1 4.6E-08 1.6E-12 106.9 29.1 282 318-623 62-514 (599)
256 2ad6_A Methanol dehydrogenase 99.1 3.3E-08 1.1E-12 108.4 28.1 279 318-622 62-504 (571)
257 3nol_A Glutamine cyclotransfer 99.0 9.5E-08 3.2E-12 90.0 24.8 203 383-601 33-244 (262)
258 2iwa_A Glutamine cyclotransfer 99.0 1.2E-07 4.1E-12 90.7 25.4 197 266-467 22-238 (266)
259 1flg_A Protein (quinoprotein e 99.0 2.6E-07 9E-12 101.3 30.7 280 318-622 68-526 (582)
260 3ei3_A DNA damage-binding prot 99.0 0.00019 6.7E-09 84.7 59.3 427 74-550 492-999 (1158)
261 2p4o_A Hypothetical protein; p 98.9 1.6E-06 5.6E-11 87.3 30.5 238 340-602 23-278 (306)
262 3nok_A Glutaminyl cyclase; bet 98.9 2.4E-07 8.1E-12 87.1 21.3 203 382-600 44-253 (268)
263 3ei3_A DNA damage-binding prot 98.9 0.00045 1.5E-08 81.6 60.2 469 25-547 485-1059(1158)
264 3mbr_X Glutamine cyclotransfer 98.9 1.9E-06 6.5E-11 80.5 26.6 204 382-600 10-222 (243)
265 2fp8_A Strictosidine synthase; 98.9 2E-06 6.7E-11 87.5 29.3 241 350-613 19-314 (322)
266 3v64_C Agrin; beta propeller, 98.8 1E-05 3.5E-10 82.7 33.8 244 267-515 36-282 (349)
267 3ott_A Two-component system se 98.8 0.00056 1.9E-08 78.6 64.2 470 21-553 71-589 (758)
268 3nol_A Glutamine cyclotransfer 98.8 1.6E-06 5.5E-11 81.7 24.3 185 265-455 43-245 (262)
269 2p4o_A Hypothetical protein; p 98.8 5.2E-06 1.8E-10 83.6 30.1 228 307-541 32-279 (306)
270 3v65_B Low-density lipoprotein 98.8 9.7E-06 3.3E-10 84.2 30.9 243 269-516 81-326 (386)
271 3nok_A Glutaminyl cyclase; bet 98.7 1.5E-06 5.2E-11 81.7 21.2 184 265-455 55-255 (268)
272 2fp8_A Strictosidine synthase; 98.7 6.6E-06 2.3E-10 83.6 28.0 237 307-550 19-313 (322)
273 2xzh_A Clathrin heavy chain 1; 98.7 0.00019 6.6E-09 68.8 35.2 283 17-337 30-331 (365)
274 1ijq_A LDL receptor, low-densi 98.7 5.1E-05 1.7E-09 76.4 34.1 231 279-513 4-243 (316)
275 3v64_C Agrin; beta propeller, 98.7 4.2E-05 1.4E-09 78.2 33.8 235 319-558 45-283 (349)
276 1ijq_A LDL receptor, low-densi 98.7 9.9E-05 3.4E-09 74.3 35.5 236 363-620 3-246 (316)
277 3mbr_X Glutamine cyclotransfer 98.7 9.3E-06 3.2E-10 75.8 25.3 186 264-455 20-224 (243)
278 3v65_B Low-density lipoprotein 98.7 3.4E-05 1.2E-09 80.2 32.1 236 319-559 88-327 (386)
279 3p5b_L Low density lipoprotein 98.7 0.00011 3.6E-09 76.7 35.9 241 282-525 88-337 (400)
280 3qqz_A Putative uncharacterize 98.7 2.5E-05 8.5E-10 74.3 27.7 210 386-610 21-251 (255)
281 2xe4_A Oligopeptidase B; hydro 98.6 1.2E-05 4E-10 91.9 29.6 193 351-548 175-398 (751)
282 3sov_A LRP-6, low-density lipo 98.6 5.6E-05 1.9E-09 75.8 31.2 229 285-515 12-245 (318)
283 1k3i_A Galactose oxidase precu 98.6 4.3E-06 1.5E-10 94.2 24.1 242 354-614 190-499 (656)
284 1k3i_A Galactose oxidase precu 98.6 1.7E-06 5.9E-11 97.4 20.6 280 269-601 190-530 (656)
285 3tc9_A Hypothetical hydrolase; 98.6 1.7E-05 5.7E-10 83.6 26.1 237 308-549 138-429 (430)
286 3qqz_A Putative uncharacterize 98.6 6.7E-05 2.3E-09 71.4 27.0 201 302-505 22-250 (255)
287 3tc9_A Hypothetical hydrolase; 98.5 4.1E-05 1.4E-09 80.6 28.3 251 351-611 138-429 (430)
288 3sov_A LRP-6, low-density lipo 98.5 8.7E-05 3E-09 74.4 29.2 235 363-620 6-246 (318)
289 3p5b_L Low density lipoprotein 98.5 0.00038 1.3E-08 72.5 34.9 237 363-620 85-328 (400)
290 4hw6_A Hypothetical protein, I 98.5 4.6E-05 1.6E-09 80.2 26.7 236 308-549 140-432 (433)
291 1bpo_A Protein (clathrin); cla 98.5 0.0015 5E-08 65.5 36.2 284 16-337 28-330 (494)
292 2xe4_A Oligopeptidase B; hydro 98.5 2.7E-05 9.1E-10 89.0 26.8 242 308-553 175-461 (751)
293 3ott_A Two-component system se 98.4 0.0064 2.2E-07 69.8 60.1 464 22-549 112-625 (758)
294 4hw6_A Hypothetical protein, I 98.4 0.00028 9.4E-09 74.3 30.0 253 350-611 139-432 (433)
295 3kya_A Putative phosphatase; s 98.4 0.00022 7.6E-09 74.8 28.4 259 351-616 140-479 (496)
296 2xbg_A YCF48-like protein; pho 98.4 0.00089 3E-08 67.6 31.8 275 93-419 35-319 (327)
297 2xbg_A YCF48-like protein; pho 98.3 0.0028 9.4E-08 64.0 34.4 273 189-506 35-320 (327)
298 3m0c_C LDL receptor, low-densi 98.3 0.00087 3E-08 75.7 32.9 228 284-515 402-639 (791)
299 3amr_A 3-phytase; beta-propell 98.3 0.00026 8.7E-09 69.8 24.6 200 402-624 39-276 (355)
300 3kya_A Putative phosphatase; s 98.3 0.00047 1.6E-08 72.3 27.6 245 308-555 140-480 (496)
301 3m0c_C LDL receptor, low-densi 98.3 0.0016 5.6E-08 73.4 33.4 209 264-474 423-640 (791)
302 3amr_A 3-phytase; beta-propell 98.2 0.00053 1.8E-08 67.6 24.7 195 275-474 39-272 (355)
303 2p9w_A MAL S 1 allergenic prot 98.1 0.0017 5.9E-08 63.4 26.4 202 347-550 10-265 (334)
304 1bpo_A Protein (clathrin); cla 98.1 0.01 3.6E-07 59.6 33.9 232 370-620 47-297 (494)
305 3s25_A Hypothetical 7-bladed b 98.0 0.0057 2E-07 60.3 27.5 254 3-331 6-286 (302)
306 1n7d_A LDL receptor, low-densi 97.9 2.1E-05 7.1E-10 88.4 9.8 227 285-514 385-620 (699)
307 2ism_A Putative oxidoreductase 97.9 0.0089 3.1E-07 60.8 28.6 232 350-600 31-333 (352)
308 2p9w_A MAL S 1 allergenic prot 97.9 0.0019 6.4E-08 63.1 21.7 158 390-550 11-215 (334)
309 1n7d_A LDL receptor, low-densi 97.9 8.4E-05 2.9E-09 83.5 13.4 231 370-620 385-622 (699)
310 2ism_A Putative oxidoreductase 97.9 0.0062 2.1E-07 62.0 26.3 238 14-283 32-333 (352)
311 2xzh_A Clathrin heavy chain 1; 97.8 0.029 9.8E-07 54.1 29.3 235 269-510 71-334 (365)
312 3a9g_A Putative uncharacterize 97.8 0.013 4.5E-07 59.5 27.1 250 3-283 19-330 (354)
313 3a9g_A Putative uncharacterize 97.7 0.024 8.3E-07 57.6 28.1 229 306-538 28-330 (354)
314 2vpj_A Kelch-like protein 12; 97.7 0.0042 1.4E-07 61.9 21.7 230 360-616 14-282 (301)
315 2vpj_A Kelch-like protein 12; 97.7 0.0025 8.6E-08 63.6 19.7 215 329-552 31-280 (301)
316 1xi4_A Clathrin heavy chain; a 97.7 0.005 1.7E-07 71.5 23.6 283 18-337 30-330 (1630)
317 2g8s_A Glucose/sorbosone dehyd 97.6 0.059 2E-06 54.7 28.6 146 391-537 17-214 (353)
318 3sre_A PON1, serum paraoxonase 97.6 0.022 7.5E-07 57.1 24.3 205 351-558 51-308 (355)
319 3pbp_A Nucleoporin NUP82; beta 97.5 0.006 2E-07 61.4 19.3 145 22-167 31-207 (452)
320 3das_A Putative oxidoreductase 97.5 0.059 2E-06 53.8 26.7 250 135-410 25-326 (347)
321 2xn4_A Kelch-like protein 2; s 97.5 0.0079 2.7E-07 59.9 20.7 229 277-510 17-278 (302)
322 3sre_A PON1, serum paraoxonase 97.5 0.012 4.1E-07 59.1 21.4 194 267-465 52-297 (355)
323 2xn4_A Kelch-like protein 2; s 97.5 0.008 2.8E-07 59.9 20.5 216 329-552 30-278 (302)
324 1xi4_A Clathrin heavy chain; a 97.5 0.034 1.2E-06 64.9 27.1 229 371-618 48-295 (1630)
325 3ii7_A Kelch-like protein 7; p 97.5 0.0094 3.2E-07 59.5 20.3 215 329-552 24-274 (306)
326 3ii7_A Kelch-like protein 7; p 97.5 0.011 3.9E-07 58.9 20.8 226 278-510 14-274 (306)
327 3sbq_A Nitrous-oxide reductase 97.4 0.062 2.1E-06 55.9 25.3 259 279-551 73-409 (638)
328 3das_A Putative oxidoreductase 97.4 0.12 4.1E-06 51.6 28.0 261 51-329 30-330 (347)
329 2g8s_A Glucose/sorbosone dehyd 97.4 0.15 5.1E-06 51.7 30.1 243 142-409 18-340 (353)
330 3pbp_A Nucleoporin NUP82; beta 97.4 0.011 3.8E-07 59.5 18.7 146 399-547 28-209 (452)
331 1zgk_A Kelch-like ECH-associat 97.3 0.01 3.4E-07 59.4 18.1 216 329-553 39-290 (308)
332 4asc_A Kelch repeat and BTB do 97.3 0.057 2E-06 54.0 23.4 197 270-471 40-282 (315)
333 1zgk_A Kelch-like ECH-associat 97.2 0.017 5.7E-07 57.7 18.4 230 274-510 23-289 (308)
334 4asc_A Kelch repeat and BTB do 97.2 0.047 1.6E-06 54.6 21.4 218 329-553 13-280 (315)
335 1cru_A Protein (soluble quinop 97.1 0.35 1.2E-05 50.8 32.7 108 53-160 27-162 (454)
336 1tl2_A L10, protein (tachylect 97.1 0.0071 2.4E-07 54.7 12.8 144 53-202 41-194 (236)
337 2uvk_A YJHT; unknown function, 97.1 0.014 4.7E-07 59.8 16.9 237 317-558 19-350 (357)
338 3sbq_A Nitrous-oxide reductase 96.9 0.18 6E-06 52.6 22.6 240 363-613 72-409 (638)
339 1tl2_A L10, protein (tachylect 96.9 0.047 1.6E-06 49.4 16.2 114 94-220 41-158 (236)
340 3s25_A Hypothetical 7-bladed b 96.9 0.37 1.3E-05 47.3 30.7 213 273-510 22-257 (302)
341 1cru_A Protein (soluble quinop 96.9 0.58 2E-05 49.1 30.2 159 141-328 26-249 (454)
342 2woz_A Kelch repeat and BTB do 96.9 0.1 3.5E-06 52.2 20.9 186 363-552 18-233 (318)
343 2woz_A Kelch repeat and BTB do 96.9 0.16 5.3E-06 50.8 22.3 218 330-554 25-291 (318)
344 2be1_A Serine/threonine-protei 96.8 0.0075 2.6E-07 59.9 11.3 190 362-555 11-236 (339)
345 2uvk_A YJHT; unknown function, 96.4 0.13 4.5E-06 52.4 18.1 234 275-512 19-346 (357)
346 2be1_A Serine/threonine-protei 96.3 0.12 4E-06 51.3 16.4 191 277-471 11-236 (339)
347 2zwa_A Leucine carboxyl methyl 95.7 0.47 1.6E-05 53.1 19.8 196 359-554 396-639 (695)
348 2zwa_A Leucine carboxyl methyl 94.3 2 6.8E-05 48.1 19.8 199 401-616 396-639 (695)
349 3qhy_B Beta-lactamase inhibito 93.8 3.1 0.00011 40.2 17.5 207 328-551 41-247 (282)
350 3qhy_B Beta-lactamase inhibito 93.4 2.1 7.3E-05 41.4 15.6 184 351-551 25-208 (282)
351 4hvt_A Ritya.17583.B, post-pro 92.8 14 0.00049 41.0 25.1 235 354-611 133-429 (711)
352 2wg3_C Hedgehog-interacting pr 89.9 21 0.00071 37.2 26.8 106 307-413 14-160 (463)
353 2wg3_C Hedgehog-interacting pr 88.9 25 0.00084 36.7 29.2 105 350-454 14-158 (463)
354 3no0_A DNA gyrase subunit A; D 88.4 18 0.00062 34.6 21.3 184 361-549 35-245 (276)
355 3q6k_A 43.2 kDa salivary prote 88.3 22 0.00077 35.6 24.4 136 414-550 124-306 (381)
356 4hvt_A Ritya.17583.B, post-pro 87.0 42 0.0014 37.3 26.5 235 311-549 133-429 (711)
357 1k8k_G P16, ARP2/3 complex 16 86.7 2.2 7.4E-05 35.6 7.2 81 727-812 39-131 (151)
358 3b7f_A Glycosyl hydrolase, BNR 86.4 30 0.001 35.1 30.8 261 277-545 23-367 (394)
359 1suu_A DNA gyrase subunit A; t 85.4 29 0.00099 33.9 26.4 188 274-465 6-230 (312)
360 1zi0_A DNA gyrase subunit A; b 85.1 29 0.001 33.7 26.3 231 274-508 1-277 (307)
361 3dwl_G Actin-related protein 2 85.0 1.7 5.7E-05 36.3 5.8 67 727-793 40-118 (152)
362 2vxg_A LD41624, GE-1, CG6181-P 84.1 7.5 0.00026 32.2 9.4 80 728-809 5-85 (139)
363 3kci_A Probable E3 ubiquitin-p 82.8 43 0.0015 33.9 26.2 236 361-611 62-344 (389)
364 1wp5_A Topoisomerase IV; broke 81.2 43 0.0015 32.8 24.2 231 274-508 3-277 (323)
365 4gq2_M Nucleoporin NUP120; bet 77.5 27 0.00093 40.5 14.7 42 581-622 235-276 (950)
366 3mez_B Mannose-specific lectin 75.3 29 0.00099 27.5 10.6 59 64-123 24-84 (113)
367 3no0_A DNA gyrase subunit A; D 74.8 60 0.002 30.9 23.8 197 307-508 24-246 (276)
368 1suu_A DNA gyrase subunit A; t 74.3 67 0.0023 31.2 27.1 190 359-550 6-231 (312)
369 3l6v_A GYRA, DNA gyrase subuni 73.7 77 0.0026 31.7 25.1 148 273-422 4-180 (370)
370 4gq2_M Nucleoporin NUP120; bet 72.9 1.4E+02 0.0049 34.5 24.8 41 521-561 237-277 (950)
371 3uc1_A DNA gyrase subunit A; D 72.8 74 0.0025 31.1 24.3 229 277-508 4-279 (327)
372 3uc1_A DNA gyrase subunit A; D 70.8 83 0.0028 30.8 22.0 197 351-549 43-278 (327)
373 1zi0_A DNA gyrase subunit A; b 70.5 80 0.0027 30.6 26.9 189 359-550 1-226 (307)
374 3b7f_A Glycosyl hydrolase, BNR 67.9 1.1E+02 0.0036 31.0 31.7 136 23-165 22-201 (394)
375 3q6k_A 43.2 kDa salivary prote 67.6 1.1E+02 0.0036 30.8 24.8 166 287-453 124-342 (381)
376 3zwu_A Alkaline phosphatase PH 67.0 17 0.00058 39.0 9.0 60 521-599 477-548 (592)
377 4a9v_A PHOX; hydrolase, beta-p 65.9 13 0.00045 39.3 7.6 55 17-71 480-549 (592)
378 4fhn_B Nucleoporin NUP120; pro 65.3 19 0.00066 42.9 10.0 41 583-623 239-279 (1139)
379 3zwu_A Alkaline phosphatase PH 63.0 22 0.00074 38.3 8.8 57 55-111 478-548 (592)
380 3f7f_A Nucleoporin NUP120; nuc 62.7 31 0.0011 37.7 9.9 38 582-621 222-259 (729)
381 4a9v_A PHOX; hydrolase, beta-p 62.3 32 0.0011 36.5 9.6 61 520-599 476-548 (592)
382 1wp5_A Topoisomerase IV; broke 55.5 1.6E+02 0.0053 28.8 25.6 189 359-550 3-225 (323)
383 4fjo_A DNA repair protein REV1 51.6 37 0.0013 26.0 6.0 36 776-812 30-68 (97)
384 3l6v_A GYRA, DNA gyrase subuni 51.5 2E+02 0.0067 28.7 26.7 190 358-550 4-265 (370)
385 4fhn_B Nucleoporin NUP120; pro 46.2 1.6E+02 0.0055 35.0 13.5 37 352-388 240-276 (1139)
386 3f7f_A Nucleoporin NUP120; nuc 46.2 80 0.0027 34.6 9.7 36 55-92 224-259 (729)
387 3a0c_A Mannose/sialic acid-bin 46.0 1.1E+02 0.0036 24.0 10.9 85 56-171 22-106 (110)
388 3kci_A Probable E3 ubiquitin-p 44.4 2.6E+02 0.0088 28.0 31.7 193 351-550 106-345 (389)
389 3s6n_2 SurviVal of motor neuro 43.0 27 0.00094 33.0 4.9 65 768-835 180-244 (280)
390 3vu7_H DNA repair protein REV1 42.8 36 0.0012 27.5 4.9 32 776-808 57-91 (124)
391 3mez_A Mannose-specific lectin 41.9 1.1E+02 0.0039 23.9 7.9 55 56-121 22-76 (111)
392 1b2p_A Protein (lectin); manno 41.5 1.3E+02 0.0046 23.9 11.0 25 97-122 63-87 (119)
393 3teq_A Stromal interaction mol 40.8 40 0.0014 25.7 4.5 46 802-847 47-98 (101)
394 4h3o_A Lectin; cadmium, plant 38.5 1.4E+02 0.0047 23.2 11.6 26 97-123 53-78 (105)
395 1sqj_A OXG-RCBH, oligoxylogluc 38.2 4.7E+02 0.016 29.3 24.4 147 306-455 14-190 (789)
396 3dzw_A Agglutinin; lectin, man 33.7 1.7E+02 0.0057 22.8 10.9 57 56-123 21-77 (109)
397 3mez_A Mannose-specific lectin 33.0 1.8E+02 0.006 22.8 9.0 77 18-111 24-101 (111)
398 4a5p_A Protein MXIA, protein V 31.9 34 0.0012 34.2 3.8 73 738-810 198-275 (383)
399 1deq_A Fibrinogen (alpha chain 26.3 1.8E+02 0.0061 28.5 7.4 65 776-840 87-151 (390)
400 3a5i_A Flagellar biosynthesis 23.8 45 0.0015 33.4 3.1 71 740-810 206-282 (389)
401 1sqj_A OXG-RCBH, oligoxylogluc 23.2 8.2E+02 0.028 27.3 26.9 152 189-370 14-190 (789)
402 2x49_A INVA, invasion protein 23.0 61 0.0021 31.7 3.8 73 738-810 148-225 (333)
403 3mez_B Mannose-specific lectin 20.8 3E+02 0.01 21.4 9.9 15 438-452 59-73 (113)
No 1
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.5e-69 Score=608.22 Aligned_cols=563 Identities=24% Similarity=0.405 Sum_probs=495.1
Q ss_pred cccccccccCCcEEEe-CCCEEEeeeC-CeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEccc
Q 038577 6 QNLLGAPYRGGNAVLS-QNTKLISPVG-NRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHC 83 (860)
Q Consensus 6 ~~~~g~~~~~~~~~~s-dg~~l~~~~~-~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~ 83 (860)
..+-|+-.....++|| ||++||++++ +.|+|||. +++....+.+|...|++++|||||++||+++.|++|+|||. +
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~ 87 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-N 87 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-T
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-C
Confidence 3455666666789999 9999999865 78999995 67777778899999999999999999999999999999996 5
Q ss_pred CeEEEEee-cCCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeec
Q 038577 84 HVVLHRVR-FKYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSK 161 (860)
Q Consensus 84 ~~~~~~~~-~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~ 161 (860)
++.+..+. |..+|.+++|+||+++|+++ .++.+++|+..... .....+|...+.++.|+|++..+++++.
T Consensus 88 ~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 159 (577)
T 2ymu_A 88 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL--------LQTLTGHSSSVWGVAFSPDGQTIASASD 159 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCE--------EEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccce--------eeeccCCCCceeeeeeecCCccceeccc
Confidence 67777776 89999999999999999998 78999999977653 5677889999999999999999999999
Q ss_pred CCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCC
Q 038577 162 DLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPS 241 (860)
Q Consensus 162 dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~ 241 (860)
++.+++|+.... .......|...|..+.|+|++. ++++++.|+.+++|+....
T Consensus 160 ~~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~-----~l~~~~~d~~v~~w~~~~~--------------- 212 (577)
T 2ymu_A 160 DKTVKLWNRNGQ-------LLQTLTGHSSSVWGVAFSPDGQ-----TIASASDDKTVKLWNRNGQ--------------- 212 (577)
T ss_dssp TSEEEEECTTSC-------EEEEEECCSSCEEEEEECTTSS-----CEEEEETTSEEEEECTTSC---------------
T ss_pred ccceecccccee-------eeeeccCCCcceeeeeecCCCC-----EEEEEcCCCEEEEEeCCCc---------------
Confidence 999999986544 4567788999999999999999 9999999999999986432
Q ss_pred CCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEE
Q 038577 242 PGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWL 321 (860)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 321 (860)
....+..+...|.+++|+|+++++++++.+|.|++|+. +++.+..+..+...+.+++|+|+++.+
T Consensus 213 --------------~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l 277 (577)
T 2ymu_A 213 --------------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTI 277 (577)
T ss_dssp --------------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred --------------EEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEE
Confidence 12334567889999999999999999999999999997 677888899999999999999999999
Q ss_pred EEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEee
Q 038577 322 VFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA 401 (860)
Q Consensus 322 ~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 401 (860)
++++.+ +.+++|+.. ++....+.+|...|.+++|+|+++.+++++.|+.|++||.. +..+..+..|...+.+++|+|
T Consensus 278 ~~~~~d-~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~~~v~~~~~s~ 354 (577)
T 2ymu_A 278 ASASDD-KTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHSSSVWGVAFSP 354 (577)
T ss_dssp EEEETT-SCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECT
T ss_pred EEEeCC-CEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCCCCEEEEEECC
Confidence 988776 999999964 56677788999999999999999999999999999999976 455677889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeE
Q 038577 402 NNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVH 481 (860)
Q Consensus 402 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~ 481 (860)
+++++++++.|+.+++||. +++....+.. +...+.+++++|+++++++++.|+ .|++||. +++.+..+.+|...|+
T Consensus 355 ~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~d~-~v~~~~~-~~~~~~~~~~~~~~v~ 430 (577)
T 2ymu_A 355 DGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQTIASASDDK-TVKLWNR-NGQLLQTLTGHSSSVW 430 (577)
T ss_dssp TSSEEEEEETTSEEEEEET-TCCEEEEEEC-CSSCEEEEEECTTSSCEEEEETTS-EEEEECT-TCCEEEEEECCSSCEE
T ss_pred CCCEEEEEeCCCEEEEEcC-CCCEEEEecC-CCCCeEEEEECCCCCEEEEEeCCC-EEEEEeC-CCCEEEEecCCCCCeE
Confidence 9999999999999999995 5566666554 456899999999999999999998 9999995 5788899999999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEeccc
Q 038577 482 GLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRR 561 (860)
Q Consensus 482 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 561 (860)
+++|+|++++|++++.|+.|++||.. ++....+..|...|++++|+|++++|++++.|+.|++||. +++++..+.+|.
T Consensus 431 ~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~ 508 (577)
T 2ymu_A 431 GVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS 508 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCS
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCC
Confidence 99999999999999999999999964 4557777889999999999999999999999999999995 788889998886
Q ss_pred ccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecccccccceeeeccCCCCCC
Q 038577 562 DISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNSKNMTE 641 (860)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (860)
. .|++++|+|||++|++++.||.|++||. +++++..+.
T Consensus 509 ~--------------------~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~--------------------- 546 (577)
T 2ymu_A 509 S--------------------SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT--------------------- 546 (577)
T ss_dssp S--------------------CEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE---------------------
T ss_pred C--------------------CEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc---------------------
Confidence 5 5999999999999999999999999996 556555432
Q ss_pred CCCCccccCCCCCccccccccccCccccCCCCCCCCCCCCccceeEEEECCCCCeEEEeccccE-EEEe
Q 038577 642 AGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNRGRPTIQTKCLKIAPTGRNFVAATTEGV-LVYS 709 (860)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-~i~~ 709 (860)
.|..+|.+++|+|||++|++++.||. .+|+
T Consensus 547 --------------------------------------~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 547 --------------------------------------GHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp --------------------------------------CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --------------------------------------CCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 12347899999999999999999995 4895
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-69 Score=610.42 Aligned_cols=565 Identities=14% Similarity=0.148 Sum_probs=464.0
Q ss_pred cEEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCe--EEEEee-c
Q 038577 17 NAVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHV--VLHRVR-F 92 (860)
Q Consensus 17 ~~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~--~~~~~~-~ 92 (860)
.++|| ||++|+++.++.|++||+.+++....+.+|...|++++|||||++||+++.|++|+|||+.+++ ....+. |
T Consensus 23 ~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~ 102 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF 102 (611)
T ss_dssp CCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECS
T ss_pred EEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeeccc
Confidence 58899 9999999999999999999998888888999999999999999999999999999999997543 344555 8
Q ss_pred CCceeEEEECCCCCEEEEEeC-----CeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCC-eEEEeecCCeEE
Q 038577 93 KYPVNAILFSPNGKYIAVGTG-----KLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSN-YLLVGSKDLAVR 166 (860)
Q Consensus 93 ~~~v~~~~fspdg~~la~~~~-----~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~-~l~s~~~dg~v~ 166 (860)
.++|.+++|+|||++||++++ +.|++||. ++. ...+.+|.+.|.+++|+|++. .|++++.|++|+
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~-------~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~ 173 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTS-------NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA 173 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCB-------CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCC-------cceecCCCCCceEEEECCCCCeEEEEEeCCCeEE
Confidence 899999999999999998843 36777774 331 356789999999999999987 599999999999
Q ss_pred EEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCc
Q 038577 167 LFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPE 246 (860)
Q Consensus 167 vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (860)
+||.... .....+.+|.+.|.+++|+|+++ +|++++.|++|++||..++...
T Consensus 174 lwd~~~~------~~~~~l~~H~~~V~~v~fspdg~-----~las~s~D~~i~lwd~~~g~~~----------------- 225 (611)
T 1nr0_A 174 IFEGPPF------KFKSTFGEHTKFVHSVRYNPDGS-----LFASTGGDGTIVLYNGVDGTKT----------------- 225 (611)
T ss_dssp EEETTTB------EEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSCEEEEETTTCCEE-----------------
T ss_pred EEECCCC------eEeeeeccccCceEEEEECCCCC-----EEEEEECCCcEEEEECCCCcEe-----------------
Confidence 9998776 56778899999999999999999 9999999999999998765320
Q ss_pred ceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecC---ceeEEEEEeeCCCEEEE
Q 038577 247 RRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISR---EKITTAVFNELGNWLVF 323 (860)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~---~~i~~~~~s~~~~~l~~ 323 (860)
..+. .......+|...|.+++|+|++++|++++.|+.|++||+.+++....+..+. .....+.| ++..+++
T Consensus 226 ---~~~~-~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s 299 (611)
T 1nr0_A 226 ---GVFE-DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVS 299 (611)
T ss_dssp ---EECB-CTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEE
T ss_pred ---eeec-cccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE--cCCEEEE
Confidence 0000 0001122688899999999999999999999999999999999888876542 23445555 7788888
Q ss_pred EEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe-ecCCCceEEEEEeeC
Q 038577 324 GCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTF-TEHTNAVTALHFMAN 402 (860)
Q Consensus 324 ~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~i~~~~~ 402 (860)
++.+ +.+++|+...+.....+.+|...|.+++|+|+|++|++++.|+.|++||+.++.....+ ..|...|.+++|+++
T Consensus 300 ~s~d-~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 300 ISAN-GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp EETT-CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred EeCC-CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 7765 99999999999888888999999999999999999999999999999999999887765 579999999999976
Q ss_pred CCEEEEEeCCCcEEEEEccccceeeE--eeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCe
Q 038577 403 NHSLLSASLDGTVRAWDLFRYRNFRT--FTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPV 480 (860)
Q Consensus 403 ~~~l~s~~~dg~i~~wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v 480 (860)
+ .+++++.|+.+++|++.+...... ...........++++|+|..++++.. + .+++|+ .++ +..+. |...+
T Consensus 379 ~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~-~-~v~~~~--~~~-~~~~~-~~~~v 451 (611)
T 1nr0_A 379 G-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACY-K-HIAIYS--HGK-LTEVP-ISYNS 451 (611)
T ss_dssp S-CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEES-S-EEEEEE--TTE-EEEEE-CSSCE
T ss_pred C-cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeC-c-eEEEEe--CCc-eeeee-cCCCc
Confidence 6 788999999999999876543210 00111234578899999988887754 4 799998 344 55554 88899
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCCcce-eEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC-CceeEE--
Q 038577 481 HGLVFSPTNATLASSSWDKTVRLWNVFEGKGS-VESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN-GELMYT-- 556 (860)
Q Consensus 481 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~-- 556 (860)
.+++|+|||++|++++.|++|++||+.++... .....|...|++++|+|||++|++++.|++|++||+.+ ++....
T Consensus 452 ~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~ 531 (611)
T 1nr0_A 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS 531 (611)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC
T ss_pred eEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeee
Confidence 99999999999999999999999999876421 22367999999999999999999999999999999987 554332
Q ss_pred EecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecccccccceeeeccC
Q 038577 557 IEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNS 636 (860)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (860)
..+|. ..|.+++|+|||++|++++.|++|++||+.++.....
T Consensus 532 ~~~H~--------------------~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~------------------ 573 (611)
T 1nr0_A 532 WTFHT--------------------AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPI------------------ 573 (611)
T ss_dssp CCCCS--------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCE------------------
T ss_pred eeecc--------------------cceeEEEECCCCCEEEEEECCCcEEEEECCCcccccc------------------
Confidence 11233 4699999999999999999999999999987531100
Q ss_pred CCCCCCCCCccccCCCCCccccccccccCccccCCCCCCCCCCCC-ccceeEEEECCCCCeEEEeccccEE-EEec
Q 038577 637 KNMTEAGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNRGRP-TIQTKCLKIAPTGRNFVAATTEGVL-VYSI 710 (860)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~spdg~~~~~~~~~g~~-i~~~ 710 (860)
..+ ..| ...|.+++|+|||+ +++++.||.+ +|++
T Consensus 574 --------------------------------~~~-------~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 574 --------------------------------IIK-------GAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp --------------------------------EET-------TSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred --------------------------------hhh-------ccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 000 112 34799999999999 9999999955 9986
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-65 Score=580.47 Aligned_cols=529 Identities=25% Similarity=0.429 Sum_probs=467.1
Q ss_pred EEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-cCCceeEEEECCCCCEEEEE-eCCeEEEEeC
Q 038577 44 TVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-FKYPVNAILFSPNGKYIAVG-TGKLVQIWRS 121 (860)
Q Consensus 44 ~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~fspdg~~la~~-~~~~i~iwd~ 121 (860)
++..+.||.+.|++++|||||++||+++.|+.|+|||. ++++++.+. |..+|++++|+|||++||++ .|+.|+|||.
T Consensus 8 e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~ 86 (577)
T 2ymu_A 8 ERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR 86 (577)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 44557799999999999999999999999999999995 678888887 99999999999999999998 7899999996
Q ss_pred CCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCC
Q 038577 122 PGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDK 201 (860)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~ 201 (860)
.+ + ++..+.+|.+.|.+++|+||+++|++++.|+.+++|+.... ......+|...+..+.++|++
T Consensus 87 ~~-~-------~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~~~ 151 (577)
T 2ymu_A 87 NG-Q-------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-------LLQTLTGHSSSVWGVAFSPDG 151 (577)
T ss_dssp TS-C-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCC-------EEEEECCCSSCEEEEEECTTS
T ss_pred CC-C-------EEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccc-------eeeeccCCCCceeeeeeecCC
Confidence 53 3 47889999999999999999999999999999999997654 566778899999999999999
Q ss_pred CCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEE
Q 038577 202 KTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVV 281 (860)
Q Consensus 202 ~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 281 (860)
. .+++++.++.+++|+.... .......+...+.++.++|+++++++
T Consensus 152 ~-----~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~ 197 (577)
T 2ymu_A 152 Q-----TIASASDDKTVKLWNRNGQ-----------------------------LLQTLTGHSSSVWGVAFSPDGQTIAS 197 (577)
T ss_dssp S-----CEEEEETTSEEEEECTTSC-----------------------------EEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred c-----cceecccccceecccccee-----------------------------eeeeccCCCcceeeeeecCCCCEEEE
Confidence 9 9999999999999986542 12233456778999999999999999
Q ss_pred EEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCC
Q 038577 282 GFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDS 361 (860)
Q Consensus 282 ~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 361 (860)
++.||.|++|+. +++.+..+..+...+.+++|+|+++.+++++.+ +.+++||. +++.+..+.+|...|.+++|+|++
T Consensus 198 ~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~ 274 (577)
T 2ymu_A 198 ASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-KTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDG 274 (577)
T ss_dssp EETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETT-SCEEEECT-TSCEEEEECCCSSCEEEEEECTTS
T ss_pred EcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCC-CEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCC
Confidence 999999999996 678888899999999999999999999988776 99999996 456777888999999999999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEE
Q 038577 362 QLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLA 441 (860)
Q Consensus 362 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 441 (860)
+.+++++.|+.|++|+. +++....+.+|...|.+++|+|+++.+++++.|+.+++||+... ....+. .+...+.+++
T Consensus 275 ~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~-~~~~~v~~~~ 351 (577)
T 2ymu_A 275 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLT-GHSSSVWGVA 351 (577)
T ss_dssp SEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEEC-CCSSCEEEEE
T ss_pred CEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEe-CCCCCEEEEE
Confidence 99999999999999996 56778889999999999999999999999999999999998654 344443 3456899999
Q ss_pred ECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCC
Q 038577 442 SDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHD 521 (860)
Q Consensus 442 ~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 521 (860)
++|+++++++++.++ .+++||. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++....+..|...
T Consensus 352 ~s~~g~~l~~~~~dg-~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 352 FSPDGQTIASASDDK-TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 428 (577)
T ss_dssp ECTTSSEEEEEETTS-EEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSC
T ss_pred ECCCCCEEEEEeCCC-EEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCC
Confidence 999999999999998 9999995 57888999999999999999999999999999999999996 45557777889999
Q ss_pred eEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecC
Q 038577 522 VLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGS 601 (860)
Q Consensus 522 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~ 601 (860)
|++++|+||+++|++++.|+.|++||. +++.+..+.+|.. .|++++|+|||++|++++.
T Consensus 429 v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~--------------------~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 429 VWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSS--------------------SVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSS--------------------CEEEEEECTTSCEEEEEET
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC--------------------CEEEEEEcCCCCEEEEEeC
Confidence 999999999999999999999999996 6778888888765 5999999999999999999
Q ss_pred CCeEEEEECCCceEEEEEeecccccccceeeeccCCCCCCCCCCccccCCCCCccccccccccCccccCCCCCCCCCCCC
Q 038577 602 SKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNSKNMTEAGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNRGRP 681 (860)
Q Consensus 602 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 681 (860)
|+.|++||. ++++++.+.. +
T Consensus 488 d~~i~iw~~-~~~~~~~~~~-----------------------------------------------------------h 507 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTG-----------------------------------------------------------H 507 (577)
T ss_dssp TSEEEEEET-TSCEEEEEEC-----------------------------------------------------------C
T ss_pred CCEEEEEcC-CCCEEEEEeC-----------------------------------------------------------C
Confidence 999999995 5665554321 1
Q ss_pred ccceeEEEECCCCCeEEEeccccEE-EEecCC
Q 038577 682 TIQTKCLKIAPTGRNFVAATTEGVL-VYSIDE 712 (860)
Q Consensus 682 ~~~~~~~~~spdg~~~~~~~~~g~~-i~~~~~ 712 (860)
..+|++++|+|||+++++++.||.+ +|+...
T Consensus 508 ~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 508 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 2368999999999999999999955 998653
No 4
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.6e-62 Score=560.08 Aligned_cols=544 Identities=13% Similarity=0.170 Sum_probs=476.4
Q ss_pred CCcEEEe-CCCEEEeeeCCeEEEEECCCC----cEEeeccCCccC-eeEEEEcC--CCCEEEEEcCCCcEEEEEcccC--
Q 038577 15 GGNAVLS-QNTKLISPVGNRVSVTDLIKS----KTVTLPVESSSN-ICRIAVSP--DGTFLLTVDENQRCHFINLHCH-- 84 (860)
Q Consensus 15 ~~~~~~s-dg~~l~~~~~~~i~v~d~~~~----~~~~~~~~h~~~-v~~va~sp--dg~~la~~~~d~~i~vwd~~~~-- 84 (860)
...++|+ ||++|+++.++.|++||+.++ +....+.+|... |++++|+| +|++||+++.||.|++||+.++
T Consensus 21 v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~ 100 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKE 100 (615)
T ss_dssp CCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGG
T ss_pred eeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcc
Confidence 4479999 999999999999999999998 777778899999 99999999 9999999999999999999855
Q ss_pred ------eEEEEee-cCCceeEEEECCCCCEEEEEeC-----CeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCC
Q 038577 85 ------VVLHRVR-FKYPVNAILFSPNGKYIAVGTG-----KLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPD 152 (860)
Q Consensus 85 ------~~~~~~~-~~~~v~~~~fspdg~~la~~~~-----~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d 152 (860)
+.+..+. |..+|.+++|+|++++|+++.+ +.|.+|| .++ ....+.+|...|.+++|+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~-------~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 101 SNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGN-------SLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp GTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCC-------EEEECCSCSSCEEEEEECSS
T ss_pred cccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCC-------cceeeecCCccEEEEEECCC
Confidence 6666666 8999999999999999999944 5788887 333 46788999999999999999
Q ss_pred CC-eEEEeecCCeEEEEeecccccCcccccceEeecCCC---cEEEEEEccC-CCCCccceEEEEcCCccEEEeeecCCC
Q 038577 153 SN-YLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRD---SVVGCFFSVD-KKTDKVNRIYTIARDCYMFSWGFSGND 227 (860)
Q Consensus 153 ~~-~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~---~i~~~~~~~~-~~~~~~~~l~s~~~dg~i~~w~~~~~~ 227 (860)
++ .+++++.|+.|++||..+. .....+.+|.. .|.+++|+|+ ++ ++++++.||.|++||+.++.
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPF------KFSASDRTHHKQGSFVRDVEFSPDSGE-----FVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTB------EEEEEECSSSCTTCCEEEEEECSTTCC-----EEEEEETTCCEEEEETTTCC
T ss_pred CCcEEEEEeCCCcEEEEeCCCc------ceeeeecccCCCCceEEEEEECCCCCC-----EEEEEeCCCeEEEEECCCCC
Confidence 98 7999999999999999887 66788889999 9999999999 88 99999999999999998753
Q ss_pred CCCccccCCCCCCCCCCCcceeeeEEeeeeccc-c---CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEe
Q 038577 228 GKIDETMEDSEPPSPGTPERRVKKWGLLRKDDF-S---QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLS 303 (860)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~ 303 (860)
. ...+ . .|...|.+++|+ +++++++++.||.|++||+.+++.+..+.
T Consensus 241 ~----------------------------~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 241 F----------------------------LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp E----------------------------EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred E----------------------------eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 2 1222 3 678899999999 99999999999999999999999998888
Q ss_pred ec----CceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 038577 304 IS----REKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS 379 (860)
Q Consensus 304 ~~----~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 379 (860)
.+ ...+.++.|+ ++..+++++.+ |.+++||+.+++.+..+.+|...|.+++| |+ +++++.||.|++|++.
T Consensus 292 ~~~~~~~~~~~~~~~~-~~~~l~~~~~~-g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 292 LDKQQLGNQQVGVVAT-GNGRIISLSLD-GTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWSSS 365 (615)
T ss_dssp CCTTCGGGCEEEEEEE-ETTEEEEEETT-SCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETTTT
T ss_pred CCCCcccCceeEEEeC-CCCeEEEEECC-CCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEEch
Confidence 77 3567788886 88888888776 99999999999999999999999999999 88 9999999999999988
Q ss_pred CCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeE
Q 038577 380 SGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEI 459 (860)
Q Consensus 380 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 459 (860)
.+. ..|...|.+++| +++..+++++.|+.+++|++.+.+... .+.+++++|++.+++++ .++ .+
T Consensus 366 ---~~~--~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~--------~~~~~~~s~~~~~~~~~-~~~-~~ 429 (615)
T 1pgu_A 366 ---SMH--QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGS--------QPKVASANNDGFTAVLT-NDD-DL 429 (615)
T ss_dssp ---EEE--CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSS--------CEEEEEECSSSEEEEEE-TTS-EE
T ss_pred ---hhc--CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccC--------CceEEEEcCCCCEEEEe-CCC-ce
Confidence 333 789999999999 667899999999999999987765433 56889999999988887 555 89
Q ss_pred EEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCcce-eEEcccCCCeEEEEEeeCCCEEEEE
Q 038577 460 FVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW-DKTVRLWNVFEGKGS-VESFPHTHDVLTVVYRPDGRQLACS 537 (860)
Q Consensus 460 ~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~ 537 (860)
.+|++.+++.+..+. |...+.+++|+ ++++++++. ||.|++||+.+++.. .....|...|++++|+|++++|+++
T Consensus 430 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 506 (615)
T 1pgu_A 430 LILQSFTGDIIKSVR-LNSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 506 (615)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEEC--SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEeccCCceeeecc-cCCCceEEEEc--CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc
Confidence 999999999998887 88999999999 889999999 999999999887644 4555799999999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEec-ccccCCCccccccccccccCCCCcEEEEEEec----------CCCEEEEecCCCeEE
Q 038577 538 TLDGQIHFWDPLNGELMYTIEG-RRDISGGRLMTDRRSAANSSSGKCFTTLCYSA----------DGSYILAGGSSKYIC 606 (860)
Q Consensus 538 ~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~----------~g~~l~~~~~dg~v~ 606 (860)
+.||.|++||+.+++.+..+.+ |.. .|++++|+| ++++|++++.||.|+
T Consensus 507 ~~dg~i~iw~~~~~~~~~~~~~~h~~--------------------~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~ 566 (615)
T 1pgu_A 507 DVMGKILLYDLQSREVKTSRWAFRTS--------------------KINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 566 (615)
T ss_dssp ETTSCEEEEETTTTEEEECCSCCCSS--------------------CEEEEEECCCC------CCSCCEEEEEETTSCEE
T ss_pred CCCCeEEEeeCCCCcceeEeecCCCC--------------------ceeEEEEcCccccccccccCCCEEEEEcCCCcEE
Confidence 9999999999999999888776 543 599999999 999999999999999
Q ss_pred EEECCCc-eEEEEEeecccccccceeeeccCCCCCCCCCCccccCCCCCccccccccccCccccCCCCCCCCCCCCccce
Q 038577 607 MYDVADQ-VLLRRFQITHNLSLDGVIDFLNSKNMTEAGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNRGRPTIQT 685 (860)
Q Consensus 607 vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 685 (860)
+||+.++ +++..+ ..+..+|
T Consensus 567 iw~~~~~~~~~~~~-----------------------------------------------------------~~h~~~v 587 (615)
T 1pgu_A 567 IYSVKRPMKIIKAL-----------------------------------------------------------NAHKDGV 587 (615)
T ss_dssp EEESSCTTCCEEET-----------------------------------------------------------TSSTTCE
T ss_pred EEECCCCceechhh-----------------------------------------------------------hcCccce
Confidence 9999886 333211 1223479
Q ss_pred eEEEECCCCCeEEEeccccE-EEEecCC
Q 038577 686 KCLKIAPTGRNFVAATTEGV-LVYSIDE 712 (860)
Q Consensus 686 ~~~~~spdg~~~~~~~~~g~-~i~~~~~ 712 (860)
.+++|+|||+ +++++.||. .+|+++.
T Consensus 588 ~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 588 NNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999999999 999999995 4998763
No 5
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.5e-63 Score=557.65 Aligned_cols=521 Identities=16% Similarity=0.159 Sum_probs=426.0
Q ss_pred cCCcEEEe-CCCEEEeee-CCeEEEEECCCCc--EEeeccCCccCeeEEEEcCCCCEEEEEcCC----CcEEEEEcccCe
Q 038577 14 RGGNAVLS-QNTKLISPV-GNRVSVTDLIKSK--TVTLPVESSSNICRIAVSPDGTFLLTVDEN----QRCHFINLHCHV 85 (860)
Q Consensus 14 ~~~~~~~s-dg~~l~~~~-~~~i~v~d~~~~~--~~~~~~~h~~~v~~va~spdg~~la~~~~d----~~i~vwd~~~~~ 85 (860)
....++|| ||++||+++ ++.|+|||+.+++ ....+.+|.+.|.+++|+|||++||+++.+ +.|++|| +++
T Consensus 61 ~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~ 138 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGT 138 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCC
Confidence 34469999 999999986 5889999997654 344566899999999999999999998764 3677776 455
Q ss_pred EEEEee-cCCceeEEEECCCCC-EEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecC
Q 038577 86 VLHRVR-FKYPVNAILFSPNGK-YIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKD 162 (860)
Q Consensus 86 ~~~~~~-~~~~v~~~~fspdg~-~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d 162 (860)
.+..+. |...|.+++|+|++. .|+++ .|+.|++||..+++ +...+.+|.+.|.+++|+|||++|++++.|
T Consensus 139 ~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-------~~~~l~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 139 SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-------FKSTFGEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-------EEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-------EeeeeccccCceEEEEECCCCCEEEEEECC
Confidence 555555 899999999999986 57777 78999999987664 577899999999999999999999999999
Q ss_pred CeEEEEeecccccCcccccceEee-------cCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccC
Q 038577 163 LAVRLFYVKEKLKGIHTNKPFLLL-------GHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETME 235 (860)
Q Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~-------~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~ 235 (860)
++|++||+.++ .....+. +|.+.|.+++|+|+++ +|++++.|++|++||+.++..
T Consensus 212 ~~i~lwd~~~g------~~~~~~~~~~~~~~~h~~~V~~v~~spdg~-----~l~s~s~D~~v~lWd~~~~~~------- 273 (611)
T 1nr0_A 212 GTIVLYNGVDG------TKTGVFEDDSLKNVAHSGSVFGLTWSPDGT-----KIASASADKTIKIWNVATLKV------- 273 (611)
T ss_dssp SCEEEEETTTC------CEEEECBCTTSSSCSSSSCEEEEEECTTSS-----EEEEEETTSEEEEEETTTTEE-------
T ss_pred CcEEEEECCCC------cEeeeeccccccccccCCCEEEEEECCCCC-----EEEEEeCCCeEEEEeCCCCce-------
Confidence 99999999877 3344442 7999999999999999 999999999999999987532
Q ss_pred CCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEe
Q 038577 236 DSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFN 315 (860)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s 315 (860)
...+. .-.........+.+ +++.+++++.+|.+++|+...++....+..|...|.+++|+
T Consensus 274 -------------~~~~~-----~~~~~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s 333 (611)
T 1nr0_A 274 -------------EKTIP-----VGTRIEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSS 333 (611)
T ss_dssp -------------EEEEE-----CCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred -------------eeeec-----CCCCccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEe
Confidence 01110 00112223455555 67889999999999999999998888889999999999999
Q ss_pred eCCCEEEEEEccCCcEEEEEccCceEEEEe-cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE---EeecCC
Q 038577 316 ELGNWLVFGCAKLGQLLVWEWRSESYILKQ-QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFV---TFTEHT 391 (860)
Q Consensus 316 ~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~ 391 (860)
|+|+.+++++.+ +.|++||+.++.....+ .+|...|.+++|++++ .+++++.|+.+++|+...+.... ......
T Consensus 334 pdg~~l~s~s~D-~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~ 411 (611)
T 1nr0_A 334 ADGKTLFSADAE-GHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLS 411 (611)
T ss_dssp TTSSEEEEEETT-SCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSSSSSSCTTSCCEEECS
T ss_pred CCCCEEEEEeCC-CcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecCCccccccceeeeecC
Confidence 999999988876 99999999998877655 5799999999999876 68899999999999987643221 001233
Q ss_pred CceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCce--
Q 038577 392 NAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRL-- 469 (860)
Q Consensus 392 ~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~-- 469 (860)
..+.+++++|++..++++ .++.+++|+. ++ ...+. ....+.+++++|+|+++++++.|+ .|++||+.++..
T Consensus 412 ~~~~~~~~s~dg~~~~~~-~~~~v~~~~~--~~-~~~~~--~~~~v~~va~spdg~~lasgs~D~-~v~lwd~~~~~~~~ 484 (611)
T 1nr0_A 412 SQPLGLAVSADGDIAVAA-CYKHIAIYSH--GK-LTEVP--ISYNSSCVALSNDKQFVAVGGQDS-KVHVYKLSGASVSE 484 (611)
T ss_dssp SCEEEEEECTTSSCEEEE-ESSEEEEEET--TE-EEEEE--CSSCEEEEEECTTSCEEEEEETTS-EEEEEEEETTEEEE
T ss_pred CCCcEEEEeCCCcEEEEE-eCceEEEEeC--Cc-eeeee--cCCCceEEEEeCCCCEEEEeCCCC-eEEEEEccCCceee
Confidence 456789999999877777 4678999983 33 44443 455789999999999999999999 999999987654
Q ss_pred EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC-CcceeE-Ec-ccCCCeEEEEEeeCCCEEEEEeCCCeEEEE
Q 038577 470 LDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE-GKGSVE-SF-PHTHDVLTVVYRPDGRQLACSTLDGQIHFW 546 (860)
Q Consensus 470 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~-~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 546 (860)
... .+|...|++++|+|+|++|++++.|++|++||+.+ ++.... .. .|...|.+++|+|||++|++++.|++|++|
T Consensus 485 ~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW 563 (611)
T 1nr0_A 485 VKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 563 (611)
T ss_dssp EEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEE
Confidence 233 67999999999999999999999999999999987 443222 23 399999999999999999999999999999
Q ss_pred eCCCCc-ee-EEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECC
Q 038577 547 DPLNGE-LM-YTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 547 d~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~ 611 (860)
|+.++. .. ..+.+|. ...|.+++|+|+++ |++++.|++|++|+++
T Consensus 564 ~~~~~~~~~~~~~~~h~-------------------~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 564 NMNKPSDHPIIIKGAHA-------------------MSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp ETTCTTSCCEEETTSST-------------------TSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred ECCCcccccchhhccCc-------------------ccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 998875 33 4455551 13599999999998 9999999999999974
No 6
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.8e-64 Score=615.92 Aligned_cols=573 Identities=19% Similarity=0.279 Sum_probs=489.9
Q ss_pred CcEEEe-CCCEEEeee-CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-c
Q 038577 16 GNAVLS-QNTKLISPV-GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-F 92 (860)
Q Consensus 16 ~~~~~s-dg~~l~~~~-~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~ 92 (860)
..++|| ||++|++++ ++.|++||+.+++....+.+|...|.+++|+|+|++||+++.|+.|++||+.+++.+..+. |
T Consensus 619 ~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 698 (1249)
T 3sfz_A 619 YHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEH 698 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 368999 999999976 5789999999999988888999999999999999999999999999999999999999887 8
Q ss_pred CCceeEEEECC--CCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEe
Q 038577 93 KYPVNAILFSP--NGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFY 169 (860)
Q Consensus 93 ~~~v~~~~fsp--dg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd 169 (860)
...|.+++|+| ++.+++++ .|+.|++||+.+++ +...+.+|.+.|++++|+|++++|++++.||.|++||
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~-------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE-------CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS-------EEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc-------hhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 99999999999 45678887 78999999999887 4788899999999999999999999999999999999
Q ss_pred ecccccCcccccceEee-------------cCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCC
Q 038577 170 VKEKLKGIHTNKPFLLL-------------GHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMED 236 (860)
Q Consensus 170 ~~~~~~~~~~~~~~~~~-------------~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~ 236 (860)
+.++ .....+. .+...+.+++|+|++. .+++++ ++.+.+|+..++..
T Consensus 772 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~-----~l~~~~-~~~v~~~d~~~~~~-------- 831 (1249)
T 3sfz_A 772 VRSA------NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD-----KIIVAA-KNKVLLFDIHTSGL-------- 831 (1249)
T ss_dssp GGGT------EEEEEEECCCCC--------CCCCCBCCCCBCTTSS-----EEEEEE-TTEEEEEETTTCCE--------
T ss_pred CCCC------cccceecccccccccCCccccccceEEEEEECCCCC-----EEEEEc-CCcEEEEEecCCCc--------
Confidence 9877 2222221 2344788899999998 788776 78999999987532
Q ss_pred CCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEee
Q 038577 237 SEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNE 316 (860)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 316 (860)
......++...+.+++|+|+++.+++++.+|.|++|++.++.....+..|...|.+++|+|
T Consensus 832 -------------------~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 832 -------------------LAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp -------------------EEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred -------------------eeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 1122346778999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEccCCcEEEEEccCceE-----------------------------EEE--------ecCcccCeEEEEEcC
Q 038577 317 LGNWLVFGCAKLGQLLVWEWRSESY-----------------------------ILK--------QQGHYFDVNCLAYSP 359 (860)
Q Consensus 317 ~~~~l~~~~~~~g~i~v~d~~~~~~-----------------------------~~~--------~~~~~~~v~~~~~s~ 359 (860)
+|+.+++++.+ |.+++|++.+... ... ...+...+.+++|+|
T Consensus 893 dg~~l~s~s~d-g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp 971 (1249)
T 3sfz_A 893 DGSSFLTASDD-QTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSP 971 (1249)
T ss_dssp TSSEEEEEETT-SCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECT
T ss_pred CCCEEEEEeCC-CeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcC
Confidence 99999988776 9999999753200 000 011345689999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEE
Q 038577 360 DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVS 439 (860)
Q Consensus 360 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 439 (860)
+++++++|+.+|.|++|++.++.....+.+|...|.+++|+|+++++++++.||.|++||+.+++.... ..+...+.+
T Consensus 972 ~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~v~~ 1049 (1249)
T 3sfz_A 972 HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL--QAHQETVKD 1049 (1249)
T ss_dssp TSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC--BCCSSCEEE
T ss_pred CCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE--ecCCCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999998876643 355668999
Q ss_pred EEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccC
Q 038577 440 LASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHT 519 (860)
Q Consensus 440 ~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 519 (860)
++++|++. +++++.++ .+++||+.+++....+.+|.+.|.+++|+|+++++++++.||+|++||+.+++....+..|.
T Consensus 1050 ~~~~~~~~-l~~~~~dg-~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~ 1127 (1249)
T 3sfz_A 1050 FRLLQDSR-LLSWSFDG-TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHN 1127 (1249)
T ss_dssp EEECSSSE-EEEEESSS-EEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCS
T ss_pred EEEcCCCc-EEEEECCC-cEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCC
Confidence 99999765 56777777 99999999999999999999999999999999999999999999999999998888888899
Q ss_pred CCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEe
Q 038577 520 HDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAG 599 (860)
Q Consensus 520 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~ 599 (860)
..|++++|+|+|++|++++.||.|++||+.+++.+..+..... ......+...|++++|+|||++|+++
T Consensus 1128 ~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~~l~fs~dg~~l~s~ 1196 (1249)
T 3sfz_A 1128 GCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISV-----------EEGTATHGGWVTDVCFSPDSKTLVSA 1196 (1249)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC------------------CCSCCCEEEECTTSSCEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccc-----------cccccccCceEEEEEECCCCCEEEEC
Confidence 9999999999999999999999999999999987766521110 00112234569999999999999998
Q ss_pred cCCCeEEEEECCCceEEEEEeecccccccceeeeccCCCCCCCCCCccccCCCCCccccccccccCccccCCCCCCCCCC
Q 038577 600 GSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNSKNMTEAGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNRG 679 (860)
Q Consensus 600 ~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 679 (860)
+ |.|++||+.+++.+..+.
T Consensus 1197 ~--g~v~vwd~~~g~~~~~~~----------------------------------------------------------- 1215 (1249)
T 3sfz_A 1197 G--GYLKWWNVATGDSSQTFY----------------------------------------------------------- 1215 (1249)
T ss_dssp S--SSEEEBCSSSCBCCCCCC-----------------------------------------------------------
T ss_pred C--CeEEEEECCCCceeeeee-----------------------------------------------------------
Confidence 6 899999999886543111
Q ss_pred CCccceeEEEECCCCCeEEEeccccEE-EEecC
Q 038577 680 RPTIQTKCLKIAPTGRNFVAATTEGVL-VYSID 711 (860)
Q Consensus 680 ~~~~~~~~~~~spdg~~~~~~~~~g~~-i~~~~ 711 (860)
.+..++.+++|+|||+.+++++.+|.+ +|++.
T Consensus 1216 ~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1216 TNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp CSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred ccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 112367889999999999999999955 89753
No 7
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.2e-60 Score=583.55 Aligned_cols=558 Identities=19% Similarity=0.286 Sum_probs=470.8
Q ss_pred eeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-cCCceeEEEECCCCCEEEEE-eCCeEEEEeCCC
Q 038577 46 TLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-FKYPVNAILFSPNGKYIAVG-TGKLVQIWRSPG 123 (860)
Q Consensus 46 ~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~ 123 (860)
..+.+|.+.|++++|||||++||+++.||+|++||+.+++.+..+. |...|.+++|+|||++||++ .|+.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 4456899999999999999999999999999999999999999888 89999999999999999999 789999999998
Q ss_pred CCcccceeEEEEEeeccCCCeEEEEEcC--CCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCC
Q 038577 124 FKKEVFAFELIRTLADCNDKVTALNWSP--DSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDK 201 (860)
Q Consensus 124 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~--d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~ 201 (860)
++ ++..+.+|...|.+++|+| ++.++++++.|+.|++||+.++ .....+.+|.+.|.+++|+|++
T Consensus 689 ~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~------~~~~~~~~h~~~v~~~~~sp~~ 755 (1249)
T 3sfz_A 689 GK-------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK------ECRNTMFGHTNSVNHCRFSPDD 755 (1249)
T ss_dssp CC-------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS------SEEEEECCCSSCEEEEEECSST
T ss_pred Cc-------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc------chhheecCCCCCEEEEEEecCC
Confidence 87 5788899999999999999 4568999999999999999988 6678889999999999999999
Q ss_pred CCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEE
Q 038577 202 KTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVV 281 (860)
Q Consensus 202 ~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 281 (860)
. ++++++.||.|++||+.++.......... ...............+.+++|+|+++.+++
T Consensus 756 ~-----~l~s~s~dg~v~vwd~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~ 815 (1249)
T 3sfz_A 756 E-----LLASCSADGTLRLWDVRSANERKSINVKR---------------FFLSSEDPPEDVEVIVKCCSWSADGDKIIV 815 (1249)
T ss_dssp T-----EEEEEESSSEEEEEEGGGTEEEEEEECCC---------------CC--------CCCCCBCCCCBCTTSSEEEE
T ss_pred C-----EEEEEECCCeEEEEeCCCCcccceecccc---------------cccccCCccccccceEEEEEECCCCCEEEE
Confidence 9 99999999999999998753210000000 000000111223447889999999999998
Q ss_pred EEcCCeEEEEECCCceeEEEEe-ecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCC
Q 038577 282 GFSNGVFGLYQMPDFVCIHLLS-ISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPD 360 (860)
Q Consensus 282 ~~~~g~i~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~ 360 (860)
++ ++.+.+|++.++.....+. .+...+.+++|+|++..+++++.+ |.+++||+.++.....+.+|...|.+++|+|+
T Consensus 816 ~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 816 AA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ-YCVELWNIDSRLKVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp EE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS-SCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred Ec-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC-CeEEEEEcCCCceeeecCCCccceEEEEECCC
Confidence 87 7899999999998887776 678899999999999999988776 99999999999999999999999999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCee-----------------------------EEE--------eecCCCceEEEEEeeCC
Q 038577 361 SQLLATGADDNKVKVWTVSSGFC-----------------------------FVT--------FTEHTNAVTALHFMANN 403 (860)
Q Consensus 361 ~~~l~~~~~dg~i~iwd~~~~~~-----------------------------~~~--------~~~~~~~v~~i~~~~~~ 403 (860)
|+.+++++.||.|++|++.+... ... ...+...+.+++|+|++
T Consensus 894 g~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 973 (1249)
T 3sfz_A 894 GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL 973 (1249)
T ss_dssp SSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS
T ss_pred CCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC
Confidence 99999999999999999653100 000 11245679999999999
Q ss_pred CEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEE
Q 038577 404 HSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGL 483 (860)
Q Consensus 404 ~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l 483 (860)
+++++++.||.|++|++.+++....+. .+...+.+++|+|+|+++++++.|+ .|++||+.+++... +.+|...|.++
T Consensus 974 ~~l~~g~~~g~i~i~d~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg-~i~vwd~~~~~~~~-~~~~~~~v~~~ 1050 (1249)
T 3sfz_A 974 EYVAFGDEDGAIKIIELPNNRVFSSGV-GHKKAVRHIQFTADGKTLISSSEDS-VIQVWNWQTGDYVF-LQAHQETVKDF 1050 (1249)
T ss_dssp SEEEEEETTSCCEEEETTTTSCEEECC-CCSSCCCCEEECSSSSCEEEECSSS-BEEEEETTTTEEEC-CBCCSSCEEEE
T ss_pred CEEEEEcCCCCEEEEEcCCCceeeecc-cCCCceEEEEECCCCCEEEEEcCCC-EEEEEECCCCceEE-EecCCCcEEEE
Confidence 999999999999999999988776655 3455789999999999999999998 99999999988764 55799999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEeccccc
Q 038577 484 VFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDI 563 (860)
Q Consensus 484 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 563 (860)
+|+|++ .+++++.||.|++||+.+++....+..|...|++++|+|+++++++++.||.|++||+.+++++..+.+|..
T Consensus 1051 ~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~- 1128 (1249)
T 3sfz_A 1051 RLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNG- 1128 (1249)
T ss_dssp EECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSS-
T ss_pred EEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCC-
Confidence 999966 578899999999999999998888889999999999999999999999999999999999998888887765
Q ss_pred CCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecccccccceeeeccCCCCCCCC
Q 038577 564 SGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNSKNMTEAG 643 (860)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (860)
.|++++|+|||++|++++.||.|++||+.+++.+..+....
T Consensus 1129 -------------------~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~-------------------- 1169 (1249)
T 3sfz_A 1129 -------------------CVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPIS-------------------- 1169 (1249)
T ss_dssp -------------------CEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC--------------------
T ss_pred -------------------cEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEecccc--------------------
Confidence 59999999999999999999999999999987653221000
Q ss_pred CCccccCCCCCccccccccccCccccCCCCCCCCCCCCccceeEEEECCCCCeEEEeccccEEEEecCCc
Q 038577 644 PMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPNRGRPTIQTKCLKIAPTGRNFVAATTEGVLVYSIDES 713 (860)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~i~~~~~~ 713 (860)
. ......+..++.+++|+|||+.+++++ ..+.+|++...
T Consensus 1170 -----------------------~-------~~~~~~~~~~v~~l~fs~dg~~l~s~~-g~v~vwd~~~g 1208 (1249)
T 3sfz_A 1170 -----------------------V-------EEGTATHGGWVTDVCFSPDSKTLVSAG-GYLKWWNVATG 1208 (1249)
T ss_dssp -------------------------------------CCSCCCEEEECTTSSCEEEES-SSEEEBCSSSC
T ss_pred -----------------------c-------cccccccCceEEEEEECCCCCEEEECC-CeEEEEECCCC
Confidence 0 000122345789999999999999886 34669998653
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-57 Score=531.57 Aligned_cols=565 Identities=12% Similarity=0.114 Sum_probs=428.0
Q ss_pred cccccccCCcEEEe-CCCEEEeee-CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCe
Q 038577 8 LLGAPYRGGNAVLS-QNTKLISPV-GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHV 85 (860)
Q Consensus 8 ~~g~~~~~~~~~~s-dg~~l~~~~-~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~ 85 (860)
..|.......++|+ ||++||+++ ++.|++||..+.+..... .|...|.+++|+| |++||+++.|++|++||+.+++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 34555556679999 999999986 589999999888776655 6889999999999 8899999999999999999999
Q ss_pred EEEEeecCCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcccceeEEE------EEeeccCCCeEEEEEcCC-CCeEE
Q 038577 86 VLHRVRFKYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKEVFAFELI------RTLADCNDKVTALNWSPD-SNYLL 157 (860)
Q Consensus 86 ~~~~~~~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~------~~~~~h~~~v~~l~~s~d-~~~l~ 157 (860)
.+..+.+...|++++|+|++++|++| .++.|++||+.+++.. ++... ..+.+|.+.|.+++|+|+ +..++
T Consensus 91 ~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~--~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 91 VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS--SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE--EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc--cceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 99999988999999999999999999 7899999999987521 11000 234679999999999996 47899
Q ss_pred EeecCCeEEEEeecccccCcccccceEeecC------------------CCcEEEEEEccCCCCCccceEEEEcCCccEE
Q 038577 158 VGSKDLAVRLFYVKEKLKGIHTNKPFLLLGH------------------RDSVVGCFFSVDKKTDKVNRIYTIARDCYMF 219 (860)
Q Consensus 158 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h------------------~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~ 219 (860)
+|+.||.| +||+.++ .....+.+| ...|.+++|+|++. +|++++.||+|+
T Consensus 169 ~g~~dg~v-lWd~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-----~lasgs~Dg~i~ 236 (902)
T 2oaj_A 169 ISYEYVTL-TYSLVEN------EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-----HIITIHEDNSLV 236 (902)
T ss_dssp EECSSCEE-EEETTTT------EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-----EEEEEETTCCEE
T ss_pred EEeCCCcE-EEECCCC------ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-----EEEEEECCCeEE
Confidence 99999999 9999887 344445444 67899999999999 999999999999
Q ss_pred EeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEec----CCC-CEEEEEEcC-----CeEE
Q 038577 220 SWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYH----RGL-DMVVVGFSN-----GVFG 289 (860)
Q Consensus 220 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~~l~~~~~~-----g~i~ 289 (860)
+||+.++.................. . .......+...|.+++|+ |++ ..+++|+.+ ..+.
T Consensus 237 lWd~~~g~~~~~r~l~~~~~~~~~~-~---------~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~ 306 (902)
T 2oaj_A 237 FWDANSGHMIMARTVFETEINVPQP-D---------YIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLT 306 (902)
T ss_dssp EEETTTCCEEEEECSSCSCTTSCCT-T---------CCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEE
T ss_pred EEECCCCcEEEEEeecccccCCCCC-c---------CCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEE
Confidence 9999875431100000000000000 0 000000234579999996 443 456677665 3788
Q ss_pred EEECC------------------CceeEEEEe-ecCceeEEEEEee----------CCCEEEEEEccCCcEEEEEccCce
Q 038577 290 LYQMP------------------DFVCIHLLS-ISREKITTAVFNE----------LGNWLVFGCAKLGQLLVWEWRSES 340 (860)
Q Consensus 290 ~~~~~------------------~~~~~~~~~-~~~~~i~~~~~s~----------~~~~l~~~~~~~g~i~v~d~~~~~ 340 (860)
+|++. +.+....+. .+...+..+.+.+ +...+++.+. +|.|++|++.++.
T Consensus 307 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~-dg~l~~~~~~~g~ 385 (902)
T 2oaj_A 307 MIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILG-NGEIETMLYPSGI 385 (902)
T ss_dssp EEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEET-TSCEEEEETTTCC
T ss_pred EEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcC-CCcEEEEECCCCC
Confidence 88842 122334443 2456788888765 2345666665 5999999987764
Q ss_pred EEEE-----------------------------------------ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 038577 341 YILK-----------------------------------------QQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS 379 (860)
Q Consensus 341 ~~~~-----------------------------------------~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 379 (860)
.... +.+|...+.+++|+|++++|++|+.|++|++||+.
T Consensus 386 ~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~ 465 (902)
T 2oaj_A 386 FTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDAS 465 (902)
T ss_dssp EECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESS
T ss_pred cccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECC
Confidence 3321 12333444555668899999999999999999998
Q ss_pred CCeeE----EE--ee-----cCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccc------------------------
Q 038577 380 SGFCF----VT--FT-----EHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYR------------------------ 424 (860)
Q Consensus 380 ~~~~~----~~--~~-----~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~------------------------ 424 (860)
++... .. +. +|...|.+++|+|++++|++|+.||+|++|++.+++
T Consensus 466 ~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (902)
T 2oaj_A 466 HGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNN 545 (902)
T ss_dssp CCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGG
T ss_pred CccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccC
Confidence 76421 11 11 788999999999999999999999999999998763
Q ss_pred ---------------------eeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEE-----Eec-Ccc
Q 038577 425 ---------------------NFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLD-----ILS-GHE 477 (860)
Q Consensus 425 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~-----~~~-~h~ 477 (860)
+...+. .+...|.+++|+|+| +||+|+.|+ .|++||++++..+. .+. +|.
T Consensus 546 ~~~~~~~~~~~~~~~~~~g~~~~~~l~-~h~~~V~svafSpdG-~lAsgs~D~-tv~lwd~~~~~~~~~~~~~~~~~gh~ 622 (902)
T 2oaj_A 546 TNGVLVDVRDRAPTGVRQGFMPSTAVH-ANKGKTSAINNSNIG-FVGIAYAAG-SLMLIDRRGPAIIYMENIREISGAQS 622 (902)
T ss_dssp SSCSEEECGGGCCTTCSEEEEEEEEEC-CCSCSEEEEEECBTS-EEEEEETTS-EEEEEETTTTEEEEEEEGGGTCSSCC
T ss_pred CccccccccccCCCCCCCccceeEEEE-cCCCcEEEEEecCCc-EEEEEeCCC-cEEEEECCCCeEEEEeehhHhccccc
Confidence 123333 356789999999999 999999998 99999998877654 233 899
Q ss_pred cCeEEEEEc-----CCC---CEEEEEeCCCcEEEEEc---cCCcceeEEccc-----CCCeEEEE-Ee------------
Q 038577 478 GPVHGLVFS-----PTN---ATLASSSWDKTVRLWNV---FEGKGSVESFPH-----THDVLTVV-YR------------ 528 (860)
Q Consensus 478 ~~v~~l~~s-----~~~---~~l~s~~~dg~i~iwd~---~~~~~~~~~~~~-----~~~v~~~~-~s------------ 528 (860)
+.|++++|+ ||| ++|++++.|++|++||+ .+++....+.+| .++|..++ |+
T Consensus 623 ~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~ 702 (902)
T 2oaj_A 623 ACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIP 702 (902)
T ss_dssp CCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHH
T ss_pred cceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHH
Confidence 999999999 885 89999999999999999 677766665554 47777776 66
Q ss_pred ----------eCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEE---E------E
Q 038577 529 ----------PDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTL---C------Y 589 (860)
Q Consensus 529 ----------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l---~------~ 589 (860)
+++..|+++ +..|++|++.++++.++...+.- .+.++ . |
T Consensus 703 ~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~~~~~--------------------~~~~v~~~~~~~~~~~ 760 (902)
T 2oaj_A 703 KMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKGFKYPL--------------------AATGLSYISTVEKNND 760 (902)
T ss_dssp HHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEECSSCE--------------------EEEEEEEEEEECSSSC
T ss_pred HHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeEcccce--------------------eeeEEEEEEecccccc
Confidence 455444444 77899999999998877755432 24554 5 7
Q ss_pred ecCCCEEEEecCCCeEEEEECCCceEEEEEeeccc
Q 038577 590 SADGSYILAGGSSKYICMYDVADQVLLRRFQITHN 624 (860)
Q Consensus 590 s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~ 624 (860)
+++|..|++++.||.|++|++++.+++..+..+..
T Consensus 761 ~~~~~~l~~~~~~g~i~~~s~p~l~~~~~~~~~~~ 795 (902)
T 2oaj_A 761 RKNLTVIITLEINGHLRVFTIPDFKEQMSEHIPFP 795 (902)
T ss_dssp EEEEEEEEEEETTSEEEEEETTTCCEEEEEECSSC
T ss_pred ccCceEEEEEeCCCcEEEEECcchHHHhhccCCcc
Confidence 89999999999999999999999999998887653
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-57 Score=524.91 Aligned_cols=524 Identities=11% Similarity=0.102 Sum_probs=397.0
Q ss_pred cCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcc
Q 038577 49 VESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKE 127 (860)
Q Consensus 49 ~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~ 127 (860)
.+|...|++++|+|+|++||+|+.||.|+||+..+++.+..+.|..+|.+++|+| |++|+++ .|+.|++||+.+++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~-- 90 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK-- 90 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS--
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc--
Confidence 4899999999999999999999999999999999988888877889999999999 8888887 79999999999876
Q ss_pred cceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccc-------eEeecCCCcEEEEEEccC
Q 038577 128 VFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKP-------FLLLGHRDSVVGCFFSVD 200 (860)
Q Consensus 128 ~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~-------~~~~~h~~~i~~~~~~~~ 200 (860)
++..+. |.+.|++++|+|++++|++|+.||.|++||+.++ ... .... ..+.+|.+.|.+++|+|+
T Consensus 91 -----~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 91 -----VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRD-QLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp -----EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTT-EEE-EEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred -----EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCC-ccc-cceeccccccccccccCCCCeEEEEEccC
Confidence 355554 7789999999999999999999999999999876 110 0000 234789999999999996
Q ss_pred C-CCCccceEEEEcCCccEEEeeecCCCCCCccccCCC-CCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCE
Q 038577 201 K-KTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDS-EPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDM 278 (860)
Q Consensus 201 ~-~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 278 (860)
+ . .+++++.||.+ +||+.++........... ..+... . .......|...|.+++|+|+|++
T Consensus 163 ~~~-----~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~---~--------~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 163 DIG-----TVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGD---F--------SEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp EEE-----EEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCST---T--------CCCTTSCBCCCEEEEEECTTSSE
T ss_pred CCC-----EEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcc---c--------ccccccccCCCeEEEEEcCCCCE
Confidence 4 5 89999999999 999987532110000000 000000 0 00112234578999999999999
Q ss_pred EEEEEcCCeEEEEECCCceeEEEEe-----e-------------cCceeEEEEEee----CCCEEEEEE-ccC----CcE
Q 038577 279 VVVGFSNGVFGLYQMPDFVCIHLLS-----I-------------SREKITTAVFNE----LGNWLVFGC-AKL----GQL 331 (860)
Q Consensus 279 l~~~~~~g~i~~~~~~~~~~~~~~~-----~-------------~~~~i~~~~~s~----~~~~l~~~~-~~~----g~i 331 (860)
|++++.||.|++||+.+++.+.... . +...|.+++|++ ++..+++++ .++ ..+
T Consensus 226 lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v 305 (902)
T 2oaj_A 226 IITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSL 305 (902)
T ss_dssp EEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCE
T ss_pred EEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceE
Confidence 9999999999999999888765411 1 234799999975 333554444 332 378
Q ss_pred EEEEcc------------------CceEEEEec-CcccCeEEEEEcC----------CCCEEEEEeCCCcEEEEECCCCe
Q 038577 332 LVWEWR------------------SESYILKQQ-GHYFDVNCLAYSP----------DSQLLATGADDNKVKVWTVSSGF 382 (860)
Q Consensus 332 ~v~d~~------------------~~~~~~~~~-~~~~~v~~~~~s~----------~~~~l~~~~~dg~i~iwd~~~~~ 382 (860)
.+|+.. +.+....+. .+...|..+.+.+ +...+++++.||.|++|++.++.
T Consensus 306 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~ 385 (902)
T 2oaj_A 306 TMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGI 385 (902)
T ss_dssp EEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCC
T ss_pred EEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCC
Confidence 888842 222233333 4667788888866 34478889999999999997774
Q ss_pred eEEE-------e----------------------------------ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q 038577 383 CFVT-------F----------------------------------TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLF 421 (860)
Q Consensus 383 ~~~~-------~----------------------------------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~ 421 (860)
.... + .+|...+.+++|+|+++.|++|+.|++|++||+.
T Consensus 386 ~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~ 465 (902)
T 2oaj_A 386 FTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDAS 465 (902)
T ss_dssp EECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESS
T ss_pred cccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECC
Confidence 3322 1 2233344445557889999999999999999998
Q ss_pred cccee--eEee--------CCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc-----------------------
Q 038577 422 RYRNF--RTFT--------TPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR----------------------- 468 (860)
Q Consensus 422 ~~~~~--~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~----------------------- 468 (860)
++... ..+. ..+...+.+++|+|+|++||+|+.|+ +|++||+.+++
T Consensus 466 ~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg-tV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (902)
T 2oaj_A 466 HGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG-DVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLN 544 (902)
T ss_dssp CCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS-CEEEEEEEECCC---------------CCSCCGG
T ss_pred CccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc-EEEEEEecCccccCccccCCCcccceeeeecccc
Confidence 77421 1111 14556899999999999999999999 99999998763
Q ss_pred ----------------------eEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCccee-----EEc-ccCC
Q 038577 469 ----------------------LLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSV-----ESF-PHTH 520 (860)
Q Consensus 469 ----------------------~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~-----~~~-~~~~ 520 (860)
++..+.+|.++|++++||||| +||+|+.|++|++||+.+...+. .+. +|..
T Consensus 545 ~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~ 623 (902)
T 2oaj_A 545 NTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA 623 (902)
T ss_dssp GSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC
T ss_pred CCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhcccccc
Confidence 367788999999999999999 99999999999999998775432 122 7888
Q ss_pred CeEEEEEe-----eCC---CEEEEEeCCCeEEEEeC---CCCceeEEEecccccCCCccccccccccccCCCCcEEEEE-
Q 038577 521 DVLTVVYR-----PDG---RQLACSTLDGQIHFWDP---LNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLC- 588 (860)
Q Consensus 521 ~v~~~~~s-----~~~---~~l~~~~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~- 588 (860)
.|++++|+ ||| ++|++|+.||+|++||+ .+|+....+.+|.... +..+|.+++
T Consensus 624 ~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~---------------~~~~v~~i~~ 688 (902)
T 2oaj_A 624 CVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVT---------------SKGPIHKIDA 688 (902)
T ss_dssp CEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECC---------------SSCCCCEEEE
T ss_pred ceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecC---------------CCCceEEEEe
Confidence 99999999 885 89999999999999999 8899888888875320 011233333
Q ss_pred Ee----------------------cCCCEEEEecCCCeEEEEECCCceEEEEE
Q 038577 589 YS----------------------ADGSYILAGGSSKYICMYDVADQVLLRRF 619 (860)
Q Consensus 589 ~s----------------------~~g~~l~~~~~dg~v~vwd~~~~~~~~~~ 619 (860)
|+ ++|..|+++ +..|++|++.+++++++.
T Consensus 689 ~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~ 739 (902)
T 2oaj_A 689 FSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKG 739 (902)
T ss_dssp EETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEE
T ss_pred EecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeE
Confidence 43 566555555 678999999999887644
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.1e-56 Score=511.73 Aligned_cols=507 Identities=14% Similarity=0.167 Sum_probs=435.6
Q ss_pred CCcEEEe---CCCEEEeee-CCeEEEEECCCC--------cEEeeccCCccCeeEEEEcCCCCEEEEEcCC----CcEEE
Q 038577 15 GGNAVLS---QNTKLISPV-GNRVSVTDLIKS--------KTVTLPVESSSNICRIAVSPDGTFLLTVDEN----QRCHF 78 (860)
Q Consensus 15 ~~~~~~s---dg~~l~~~~-~~~i~v~d~~~~--------~~~~~~~~h~~~v~~va~spdg~~la~~~~d----~~i~v 78 (860)
...++|+ ||++|++++ ++.|++||+.++ +....+.+|...|.+++|+|+|++|++++.+ +.|.+
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEE
Confidence 4457787 688999876 578999999865 5566666899999999999999999999887 67888
Q ss_pred EEcccCeEEEEee-cCCceeEEEECCCCC-EEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCC---CeEEEEEcCC
Q 038577 79 INLHCHVVLHRVR-FKYPVNAILFSPNGK-YIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCND---KVTALNWSPD 152 (860)
Q Consensus 79 wd~~~~~~~~~~~-~~~~v~~~~fspdg~-~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~s~d 152 (860)
|| +++.+..+. |...|.+++|+|+++ +++++ .++.|++||..+++ +...+.+|.. .|.+++|+|+
T Consensus 147 ~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-------~~~~~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 147 WD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK-------FSASDRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp TT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE-------EEEEECSSSCTTCCEEEEEECST
T ss_pred EE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc-------eeeeecccCCCCceEEEEEECCC
Confidence 87 667777776 899999999999997 67777 78999999998776 5788899999 9999999999
Q ss_pred -CCeEEEeecCCeEEEEeecccccCcccccceEe-e---cCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCC
Q 038577 153 -SNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLL-L---GHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGND 227 (860)
Q Consensus 153 -~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-~---~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~ 227 (860)
+++|++++.||.|++||+.++ .....+ . +|...|.+++|+ ++. ++++++.|+.+++||+.++.
T Consensus 218 ~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~~~~~~~~~v~~~~~~-~~~-----~l~~~~~d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 218 SGEFVITVGSDRKISCFDGKSG------EFLKYIEDDQEPVQGGIFALSWL-DSQ-----KFATVGADATIRVWDVTTSK 285 (615)
T ss_dssp TCCEEEEEETTCCEEEEETTTC------CEEEECCBTTBCCCSCEEEEEES-SSS-----EEEEEETTSEEEEEETTTTE
T ss_pred CCCEEEEEeCCCeEEEEECCCC------CEeEEecccccccCCceEEEEEc-CCC-----EEEEEcCCCcEEEEECCCCc
Confidence 999999999999999999887 456666 5 899999999999 888 99999999999999998643
Q ss_pred CCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCc
Q 038577 228 GKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISRE 307 (860)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~ 307 (860)
. ...+ ..........+.++.+. +++.+++++.+|.|++|++.+++.+..+..|..
T Consensus 286 ~--------------------~~~~----~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 340 (615)
T 1pgu_A 286 C--------------------VQKW----TLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNK 340 (615)
T ss_dssp E--------------------EEEE----ECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSS
T ss_pred E--------------------EEEE----cCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCC
Confidence 2 0011 00001223567788875 899999999999999999999999999999999
Q ss_pred eeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 038577 308 KITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 308 ~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 387 (860)
.|.+++| |+ +++++. +|.|++|++. .+. ..|...|.+++| +++..+++++.|+.+++|++.++...
T Consensus 341 ~v~~~~~-~~---l~~~~~-dg~i~~w~~~---~~~--~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~--- 406 (615)
T 1pgu_A 341 GITALTV-NP---LISGSY-DGRIMEWSSS---SMH--QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFG--- 406 (615)
T ss_dssp CEEEEET-TT---TEEEET-TSCEEETTTT---EEE--CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECS---
T ss_pred CEEEEEe-cC---cEEECC-CCeEEEEEch---hhc--CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccCccc---
Confidence 9999999 87 666555 4999999998 232 789999999999 66789999999999999998654332
Q ss_pred ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEec-CCCeEEEEECCC
Q 038577 388 TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTL-DSFEIFVWSMKT 466 (860)
Q Consensus 388 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~i~v~d~~~ 466 (860)
..+.+++++|++..++++ .++.+.+|++.+++....+. ....+.+++++ ++++++++. ++ .|++||+.+
T Consensus 407 ----~~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~l~~~~~~d~-~i~~~~~~~ 476 (615)
T 1pgu_A 407 ----SQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVR--LNSPGSAVSLS--QNYVAVGLEEGN-TIQVFKLSD 476 (615)
T ss_dssp ----SCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEE--CSSCEEEEEEC--SSEEEEEETTTS-CEEEEETTE
T ss_pred ----CCceEEEEcCCCCEEEEe-CCCceEEEeccCCceeeecc--cCCCceEEEEc--CCEEEEeecCCC-eEEEEECCC
Confidence 268899999999777776 88899999999988888876 44578999999 899999998 87 999999998
Q ss_pred CceE-EEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc-cCCCeEEEEEee----------CCCEE
Q 038577 467 GRLL-DILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP-HTHDVLTVVYRP----------DGRQL 534 (860)
Q Consensus 467 ~~~~-~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~----------~~~~l 534 (860)
++.. ..+.+|...|++++|+|++++|++++.||.|++||+.+++....+.. |...|++++|+| ++++|
T Consensus 477 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l 556 (615)
T 1pgu_A 477 LEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLV 556 (615)
T ss_dssp EEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEE
T ss_pred ccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEE
Confidence 8776 67788999999999999999999999999999999999987777766 999999999999 99999
Q ss_pred EEEeCCCeEEEEeCCCC-ceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 038577 535 ACSTLDGQIHFWDPLNG-ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVAD 612 (860)
Q Consensus 535 ~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~ 612 (860)
++++.||.|++||+.++ +++..+.+|.. .|++++|+|+++ |++++.||.|++|++..
T Consensus 557 ~~~~~dg~i~iw~~~~~~~~~~~~~~h~~--------------------~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 557 ATGSLDTNIFIYSVKRPMKIIKALNAHKD--------------------GVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEESSCTTCCEEETTSSTT--------------------CEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEEcCCCcEEEEECCCCceechhhhcCcc--------------------ceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999999999999998 77877777764 599999999999 99999999999999875
No 11
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2e-48 Score=458.65 Aligned_cols=438 Identities=15% Similarity=0.161 Sum_probs=372.6
Q ss_pred EeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-cCCceeEEEECCCCCEEEEE-eCCeEEEEeCC
Q 038577 45 VTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-FKYPVNAILFSPNGKYIAVG-TGKLVQIWRSP 122 (860)
Q Consensus 45 ~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~ 122 (860)
...+.+|.+.|++++|||+|++||+++.+|.|+|||+.+++.+..+. |..+|++++|+|++++||++ .++.|++||+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 44556899999999999999999999999999999999999999888 89999999999999999999 78999999999
Q ss_pred CCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEcc-CC
Q 038577 123 GFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSV-DK 201 (860)
Q Consensus 123 ~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~ 201 (860)
+++ ....+.+|.+.|++++|+|++++|++++.||.|++||+.++ . .....+.+|...|.+++|+| ++
T Consensus 86 ~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--~---~~~~~~~~~~~~v~~~~~~p~~~ 153 (814)
T 3mkq_A 86 TGE-------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN--W---ALEQTFEGHEHFVMCVAFNPKDP 153 (814)
T ss_dssp TCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT--S---EEEEEEECCSSCEEEEEEETTEE
T ss_pred CCc-------EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC--c---eEEEEEcCCCCcEEEEEEEcCCC
Confidence 887 47788999999999999999999999999999999999875 1 34567889999999999999 77
Q ss_pred CCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecC--CCCEE
Q 038577 202 KTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHR--GLDMV 279 (860)
Q Consensus 202 ~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l 279 (860)
. .+++++.||.|++||+.++.. .. .....+...+.+++|+| ++.++
T Consensus 154 ~-----~l~~~~~dg~v~vwd~~~~~~----------------------~~-----~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 154 S-----TFASGCLDRTVKVWSLGQSTP----------------------NF-----TLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp E-----EEEEEETTSEEEEEETTCSSC----------------------SE-----EEECCCTTCCCEEEECCSTTCCEE
T ss_pred C-----EEEEEeCCCeEEEEECCCCcc----------------------ee-----EEecCCCCCEEEEEEEECCCCCEE
Confidence 7 999999999999999876432 11 11123447799999999 99999
Q ss_pred EEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcC
Q 038577 280 VVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSP 359 (860)
Q Consensus 280 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~ 359 (860)
++++.+|.|++||+.+++.+..+..+...+.+++|+|+++.+++++.+ |.|++||+.+++....+..|...+.+++|+|
T Consensus 202 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSED-GTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETT-SCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 999999999999999999999999999999999999999999888776 9999999999999999999999999999999
Q ss_pred CCC--EEEEEeCCCcEEEEECCCCeeEE-------------------------------------------EeecCCCce
Q 038577 360 DSQ--LLATGADDNKVKVWTVSSGFCFV-------------------------------------------TFTEHTNAV 394 (860)
Q Consensus 360 ~~~--~l~~~~~dg~i~iwd~~~~~~~~-------------------------------------------~~~~~~~~v 394 (860)
++. +++++ .++.+.+|++..+.... .+..+...+
T Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (814)
T 3mkq_A 281 TGRKNYIASG-FDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFP 359 (814)
T ss_dssp TCGGGEEEEE-ETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCC
T ss_pred CCCceEEEEE-eCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCC
Confidence 987 45554 46778888875432211 112244568
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec
Q 038577 395 TALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS 474 (860)
Q Consensus 395 ~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~ 474 (860)
.+++|+|+|+++++++ |+.+.+|++....... ...+.+++|+|+++++++++.++ .+++|+. +.
T Consensus 360 ~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~~------~~~i~~~~~spdg~~la~~~~~g-~v~l~~~--------~~ 423 (814)
T 3mkq_A 360 QSLAHSPNGRFVTVVG-DGEYVIYTALAWRNKA------FGKCQDFVWGPDSNSYALIDETG-QIKYYKN--------FK 423 (814)
T ss_dssp SEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE------EEECSEEEECTTSSCEEEECTTC-CEEEEET--------TE
T ss_pred ceeEECCCCCEEEEec-CCEEEEEECccccccC------CCceEEEEEeCCCCeEEEEeCCC-cEEEEEC--------CC
Confidence 8999999999999988 8999999986543322 23567899999999999999988 9999963 35
Q ss_pred CcccCeEEEEEcCCC---CEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEE------eCCCeEEE
Q 038577 475 GHEGPVHGLVFSPTN---ATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACS------TLDGQIHF 545 (860)
Q Consensus 475 ~h~~~v~~l~~s~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~------~~dg~i~i 545 (860)
+|...+.+++|+|++ .+|++++.|+.|++||+.+++.......+.. .++|+|||++|+++ +.++.+.+
T Consensus 424 ~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~~~~~~~~~~~~~~ 500 (814)
T 3mkq_A 424 EVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVNTNSNGDEASGYTL 500 (814)
T ss_dssp ECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEE---EEEECTTSSEEEEEECCCSSCSCSEEEE
T ss_pred CccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEEcCcccCCceEEEE
Confidence 688889999999998 6889999999999999999886666655553 89999999999999 66655555
Q ss_pred Ee
Q 038577 546 WD 547 (860)
Q Consensus 546 wd 547 (860)
|.
T Consensus 501 ~~ 502 (814)
T 3mkq_A 501 LF 502 (814)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 12
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.4e-47 Score=449.52 Aligned_cols=438 Identities=15% Similarity=0.222 Sum_probs=375.5
Q ss_pred EEee-cCCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeE
Q 038577 88 HRVR-FKYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAV 165 (860)
Q Consensus 88 ~~~~-~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v 165 (860)
+.+. |.+.|.+++|+|+|++||++ .++.|+|||+.+++ ....+.+|.+.|.+++|+|++++|++++.||.|
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc-------eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 3344 89999999999999999999 68899999999876 478888999999999999999999999999999
Q ss_pred EEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCC
Q 038577 166 RLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTP 245 (860)
Q Consensus 166 ~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 245 (860)
++||+.++ .....+.+|.+.|.+++|+|+++ +|++++.||.|++|++.++..
T Consensus 80 ~vw~~~~~------~~~~~~~~~~~~v~~~~~s~~~~-----~l~~~~~dg~i~vw~~~~~~~----------------- 131 (814)
T 3mkq_A 80 RVFNYNTG------EKVVDFEAHPDYIRSIAVHPTKP-----YVLSGSDDLTVKLWNWENNWA----------------- 131 (814)
T ss_dssp EEEETTTC------CEEEEEECCSSCEEEEEECSSSS-----EEEEEETTSEEEEEEGGGTSE-----------------
T ss_pred EEEECCCC------cEEEEEecCCCCEEEEEEeCCCC-----EEEEEcCCCEEEEEECCCCce-----------------
Confidence 99999988 66788899999999999999999 999999999999999986421
Q ss_pred cceeeeEEeeeeccccCCCCceEEEEecC-CCCEEEEEEcCCeEEEEECCCceeEEEEeecC-ceeEEEEEee--CCCEE
Q 038577 246 ERRVKKWGLLRKDDFSQAPSKVTACDYHR-GLDMVVVGFSNGVFGLYQMPDFVCIHLLSISR-EKITTAVFNE--LGNWL 321 (860)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~-~~i~~~~~s~--~~~~l 321 (860)
....+..|...|.+++|+| +++.+++++.||.|++||+.++.....+..+. ..+..++|+| ++..+
T Consensus 132 ----------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 132 ----------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp ----------EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred ----------EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 1234456788999999999 88999999999999999998888877777665 7899999999 88988
Q ss_pred EEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEee
Q 038577 322 VFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA 401 (860)
Q Consensus 322 ~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 401 (860)
++++.+ |.|++||..++..+..+.+|...|.+++|+|+++++++++.||.|++||+.++.....+..|...+.+++|+|
T Consensus 202 ~~~~~d-g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 202 ITASDD-LTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp EEECTT-SEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EEEeCC-CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 888765 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCE-EEEEeCCCcEEEEEccccceeeEee------------------------------------------CCCCCcEE
Q 038577 402 NNHS-LLSASLDGTVRAWDLFRYRNFRTFT------------------------------------------TPSSRQFV 438 (860)
Q Consensus 402 ~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~------------------------------------------~~~~~~~~ 438 (860)
++.. +++++.++.+.+|++........+. ......+.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (814)
T 3mkq_A 281 TGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ 360 (814)
T ss_dssp TCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCS
T ss_pred CCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCc
Confidence 9864 3555567788899876433221111 11223467
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEccc
Q 038577 439 SLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPH 518 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 518 (860)
+++++|+|+++++++ ++ .+.+|++...... +.+.+.+++|+|+++++++++.+|.|++|+.. .+|
T Consensus 361 ~~~~spdg~~la~~~-~~-~~~i~~~~~~~~~-----~~~~i~~~~~spdg~~la~~~~~g~v~l~~~~--------~~~ 425 (814)
T 3mkq_A 361 SLAHSPNGRFVTVVG-DG-EYVIYTALAWRNK-----AFGKCQDFVWGPDSNSYALIDETGQIKYYKNF--------KEV 425 (814)
T ss_dssp EEEECTTSSEEEEEE-TT-EEEEEETTTTEEE-----EEEECSEEEECTTSSCEEEECTTCCEEEEETT--------EEC
T ss_pred eeEECCCCCEEEEec-CC-EEEEEECcccccc-----CCCceEEEEEeCCCCeEEEEeCCCcEEEEECC--------CCc
Confidence 899999999999998 55 8999998754432 35678899999999999999999999999632 346
Q ss_pred CCCeEEEEEeeCC---CEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCE
Q 038577 519 THDVLTVVYRPDG---RQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSY 595 (860)
Q Consensus 519 ~~~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~ 595 (860)
...+.+++|+|++ .+|++++.|+.|++||+.+++.+..+..+. ..++|+|||++
T Consensus 426 ~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~-----------------------~~v~~s~dg~~ 482 (814)
T 3mkq_A 426 TSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNA-----------------------KDVIWSDNGEL 482 (814)
T ss_dssp TTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCE-----------------------EEEEECTTSSE
T ss_pred cceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCC-----------------------CEEEEcCCCCE
Confidence 6778899999998 688999999999999999999998887764 38999999999
Q ss_pred EEEe------cCCCeEEEEE
Q 038577 596 ILAG------GSSKYICMYD 609 (860)
Q Consensus 596 l~~~------~~dg~v~vwd 609 (860)
|+++ +.++.+.+|-
T Consensus 483 la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 483 VMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp EEEEECCCSSCSCSEEEEEE
T ss_pred EEEEEcCcccCCceEEEEEe
Confidence 9999 6666555554
No 13
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.1e-42 Score=350.79 Aligned_cols=292 Identities=22% Similarity=0.373 Sum_probs=266.2
Q ss_pred eeEEEEeecCceeEEEEEeeC----CCEEEEEEccCCcEEEEEccCceE--EEEecCcccCeEEEEEcCCCCEEEEEeCC
Q 038577 297 VCIHLLSISREKITTAVFNEL----GNWLVFGCAKLGQLLVWEWRSESY--ILKQQGHYFDVNCLAYSPDSQLLATGADD 370 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~~~~g~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 370 (860)
........|.+.|.+++|+|+ +..+++++.+ +.|++|++..+.. ...+.+|...|.+++|++++..+++++.|
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D-~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D 101 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLD-DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD 101 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETT-SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCC-CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC
Confidence 334556679999999999985 4567776655 9999999987754 44578999999999999999999999999
Q ss_pred CcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEE
Q 038577 371 NKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVIC 450 (860)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 450 (860)
+.|++||+.+++.+..+..|...+.+++|+|++++|++++.||.+++|++.+++....+... ...+.+++++|++++++
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~la 180 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTR-GKFILSIAYSPDGKYLA 180 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECS-SSCEEEEEECTTSSEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCC-CceEEEEEECCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999998887776654 44789999999999999
Q ss_pred EEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeC
Q 038577 451 AGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPD 530 (860)
Q Consensus 451 ~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 530 (860)
+++.|+ .|++||+++++.+..+.+|..+|.+++|+|++++|++++.||.|++||+.+++....+.+|...|.+++|+|+
T Consensus 181 sg~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 181 SGAIDG-IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp EEETTS-CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEcCCC-eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 999998 9999999999999999999999999999999999999999999999999999888888899999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEEC
Q 038577 531 GRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 531 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
+++|++++.||.|++||+.+++++..+.+|.. .|.+++|+|+|++|++++.||.|++||.
T Consensus 260 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~--------------------~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 260 DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQD--------------------QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCC--------------------cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999988875 5999999999999999999999999997
Q ss_pred C
Q 038577 611 A 611 (860)
Q Consensus 611 ~ 611 (860)
+
T Consensus 320 p 320 (321)
T 3ow8_A 320 P 320 (321)
T ss_dssp C
T ss_pred C
Confidence 4
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-42 Score=366.48 Aligned_cols=290 Identities=23% Similarity=0.400 Sum_probs=272.2
Q ss_pred EEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 038577 299 IHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTV 378 (860)
Q Consensus 299 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 378 (860)
...+..|..+|++++|+|++..+++++.+ |.|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~D-g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASED-ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESS-SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 34567889999999999999999988876 99999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCe
Q 038577 379 SSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFE 458 (860)
Q Consensus 379 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 458 (860)
.+++++..+.+|...|.+++|+|+++++++++.|+.|++||+.++.+...+..+ ...+.++.++|++.++++++.|+ .
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g~~l~s~s~D~-~ 257 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQ-T 257 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSSEEEEEETTS-C
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC-CccEEEEEECCCCCEEEEEcCCC-e
Confidence 999999999999999999999999999999999999999999999988887654 45789999999999999999999 9
Q ss_pred EEEEECCCCceEEEecCcccCeEEEEEcCC--------------------CCEEEEEeCCCcEEEEEccCCcceeEEccc
Q 038577 459 IFVWSMKTGRLLDILSGHEGPVHGLVFSPT--------------------NATLASSSWDKTVRLWNVFEGKGSVESFPH 518 (860)
Q Consensus 459 i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~--------------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 518 (860)
|++||+.+++....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+.++.....+.+|
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECC
Confidence 999999999999999999999999999996 678999999999999999999888888899
Q ss_pred CCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEE
Q 038577 519 THDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILA 598 (860)
Q Consensus 519 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~ 598 (860)
...|++++|+|+|++|++++.||.|++||+.+++++..+.+|.. .|++++|+|++.+|++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~--------------------~v~~l~~~~~~~~l~s 397 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH--------------------FVTSLDFHKTAPYVVT 397 (410)
T ss_dssp SSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS--------------------CEEEEEECSSSSCEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC--------------------cEEEEEEcCCCCEEEE
Confidence 99999999999999999999999999999999999999988875 5999999999999999
Q ss_pred ecCCCeEEEEECC
Q 038577 599 GGSSKYICMYDVA 611 (860)
Q Consensus 599 ~~~dg~v~vwd~~ 611 (860)
|+.||+|++|+++
T Consensus 398 gs~D~~i~vW~~r 410 (410)
T 1vyh_C 398 GSVDQTVKVWECR 410 (410)
T ss_dssp EETTSEEEEEC--
T ss_pred EeCCCcEEEEeCC
Confidence 9999999999863
No 15
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=8.5e-41 Score=347.72 Aligned_cols=293 Identities=24% Similarity=0.384 Sum_probs=260.2
Q ss_pred EEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEE
Q 038577 133 LIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTI 212 (860)
Q Consensus 133 ~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~ 212 (860)
....+.+|.+.|.+++|+||+++|++++.||.|++||..++ .....+..|...|.+++|+|++. +++++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~------~~~~~~~~~~~~v~~~~~s~~~~-----~l~s~ 115 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT------NKVHAIPLRSSWVMTCAYAPSGN-----YVACG 115 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC------CEEEEEECSSSCEEEEEECTTSS-----EEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC------CcceEeecCCccEEEEEECCCCC-----EEEEE
Confidence 56789999999999999999999999999999999999887 56778889999999999999998 99999
Q ss_pred cCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEE
Q 038577 213 ARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQ 292 (860)
Q Consensus 213 ~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~ 292 (860)
+.|+.+++|++.+...
T Consensus 116 ~~d~~v~iw~~~~~~~---------------------------------------------------------------- 131 (340)
T 1got_B 116 GLDNICSIYNLKTREG---------------------------------------------------------------- 131 (340)
T ss_dssp ETTCEEEEEETTTCSB----------------------------------------------------------------
T ss_pred eCCCeEEEEECccCCC----------------------------------------------------------------
Confidence 9999999998765311
Q ss_pred CCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCc
Q 038577 293 MPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNK 372 (860)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 372 (860)
.......+..|...+.++.|++++. +++++. |+.|++||+.+++.+..+.+|...|.+++|+|+++++++|+.||.
T Consensus 132 --~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~-d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~ 207 (340)
T 1got_B 132 --NVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDAS 207 (340)
T ss_dssp --SCEEEEEEECCSSCEEEEEEEETTE-EEEEET-TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred --cceeEEEecCCCccEEEEEECCCCc-EEEEEC-CCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCc
Confidence 0112233455667778888887765 555554 499999999999999999999999999999999999999999999
Q ss_pred EEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCC-CCcEEEEEECCCCCEEEE
Q 038577 373 VKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPS-SRQFVSLASDQSGEVICA 451 (860)
Q Consensus 373 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 451 (860)
|++||+.++.....+.+|...|.+++|+|++++|++++.||.|++||+++++....+.... ...+.+++|+|+|+++++
T Consensus 208 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 287 (340)
T 1got_B 208 AKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA 287 (340)
T ss_dssp EEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred EEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEE
Confidence 9999999999999999999999999999999999999999999999999888777665432 346899999999999999
Q ss_pred EecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 038577 452 GTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWN 505 (860)
Q Consensus 452 ~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 505 (860)
++.|+ .|++||+.+++.+..+.+|.++|.+++|+|++.+|++++.||+|++||
T Consensus 288 g~~d~-~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 288 GYDDF-NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTS-EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ECCCC-eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99998 999999999999999999999999999999999999999999999996
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-41 Score=361.01 Aligned_cols=288 Identities=21% Similarity=0.357 Sum_probs=272.0
Q ss_pred ccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc
Q 038577 258 DDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 258 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~ 337 (860)
..+.+|...|++++|+|++.++++|+.||.|++||+.+++....+..|...|.+++|+|+++.+++++.+ +.|++||+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D-~~i~iwd~~ 180 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD-MTIKLWDFQ 180 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT-SCCCEEETT
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEeCC
Confidence 3456889999999999999999999999999999999999999999999999999999999999888776 999999999
Q ss_pred CceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEE
Q 038577 338 SESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRA 417 (860)
Q Consensus 338 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~ 417 (860)
+++.+..+.+|...|.+++|+|+++++++|+.|+.|++||+.++.++..+.+|...|.++.++|++.++++++.|+.|++
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccccceeeEeeCCCCCcEEEEEECCC--------------------CCEEEEEecCCCeEEEEECCCCceEEEecCcc
Q 038577 418 WDLFRYRNFRTFTTPSSRQFVSLASDQS--------------------GEVICAGTLDSFEIFVWSMKTGRLLDILSGHE 477 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~ 477 (860)
||+.+++....+.. +...+.+++|+|+ |.++++++.|+ .|++||+++++.+..+.+|.
T Consensus 261 wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~-~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 261 WVVATKECKAELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK-TIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EETTTCCEEEEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS-EEEEEETTTTEEEEEEECCS
T ss_pred EECCCCceeeEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC-eEEEEECCCCceEEEEECCC
Confidence 99999888777654 4568999999996 67899999999 99999999999999999999
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeC
Q 038577 478 GPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDP 548 (860)
Q Consensus 478 ~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 548 (860)
..|.+++|+|++++|++++.||.|++||+.+++....+..|...|++++|+|++.+|++|+.||.|++|++
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 99999999999999999999999999999999888888899999999999999999999999999999986
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.2e-40 Score=344.63 Aligned_cols=290 Identities=20% Similarity=0.330 Sum_probs=265.0
Q ss_pred ceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 038577 296 FVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKV 375 (860)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 375 (860)
......+..|...|.+++|+|+++.+++++.+ |.|++||..++..+..+..|...|.+++|+|+++++++|+.|+.|++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~D-g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQD-GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCC-CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 34567788999999999999999999988776 99999999999999999999999999999999999999999999999
Q ss_pred EECCCC----eeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEE
Q 038577 376 WTVSSG----FCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICA 451 (860)
Q Consensus 376 wd~~~~----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 451 (860)
|++.++ .....+.+|...|.++.|++++ .+++++.|+.|++||+.+++....+.. +...+.+++++|+++++++
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCCEEEE
Confidence 999865 4566788999999999999887 489999999999999999988877764 4558999999999999999
Q ss_pred EecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEc--ccCCCeEEEEEee
Q 038577 452 GTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESF--PHTHDVLTVVYRP 529 (860)
Q Consensus 452 ~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~ 529 (860)
++.|+ .|++||+++++....+.+|...|.+++|+|++++|++++.||+|++||+.+++...... .+...|++++|+|
T Consensus 202 g~~d~-~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 202 GACDA-SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EETTS-CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EeCCC-cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 99999 99999999999999999999999999999999999999999999999999887554443 2335799999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEE
Q 038577 530 DGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYD 609 (860)
Q Consensus 530 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd 609 (860)
+|++|++|+.||.|++||+.+++.+..+.+|.. .|.+++|+|+|++|++|+.||.|++||
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~--------------------~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN--------------------RVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEECCCCeEEEEEcccCcEeeEeecCCC--------------------cEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999998875 599999999999999999999999997
No 18
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=1e-39 Score=391.09 Aligned_cols=525 Identities=11% Similarity=0.045 Sum_probs=393.3
Q ss_pred CceecccccccccC--CcEEEeCCCEEEeeeCCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCC------
Q 038577 2 NYRFQNLLGAPYRG--GNAVLSQNTKLISPVGNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDEN------ 73 (860)
Q Consensus 2 ~~~~~~~~g~~~~~--~~~~~sdg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d------ 73 (860)
+|++....|....+ ...+|| +++|++...+.|++|++.+++...+. +|...+.+++|||||++||+++.+
T Consensus 2 ~~kl~~~~g~~~~~~~~~~~~S-~~~iaf~~~~~l~~~~~~gg~~~~lt-~~~~~v~~~~~SPDG~~la~~s~~~~~~~~ 79 (1045)
T 1k32_A 2 TFKLHEMHGLCMPNLLLNPDIH-GDRIIFVCCDDLWEHDLKSGSTRKIV-SNLGVINNARFFPDGRKIAIRVMRGSSLNT 79 (1045)
T ss_dssp -----------CCCCCEEEEEE-TTEEEEEETTEEEEEETTTCCEEEEE-CSSSEEEEEEECTTSSEEEEEEEESTTCCE
T ss_pred cccccccccccccceEeCcEEe-CCEEEEEECCcEEEEECCCCcEEEee-eCCCcccCeEECCCCCEEEEEEeeccCCCC
Confidence 35666655553322 245566 66899998899999999999876665 799999999999999999988543
Q ss_pred CcEEEEEcccCeEEEEeecCCce-------eEEEECCCCCEEEEEeC-------CeEEEEeCCCCCcccceeEEEEEeec
Q 038577 74 QRCHFINLHCHVVLHRVRFKYPV-------NAILFSPNGKYIAVGTG-------KLVQIWRSPGFKKEVFAFELIRTLAD 139 (860)
Q Consensus 74 ~~i~vwd~~~~~~~~~~~~~~~v-------~~~~fspdg~~la~~~~-------~~i~iwd~~~~~~~~~~~~~~~~~~~ 139 (860)
..|++||+.+++......|...+ .+++|||||++++++.. ..|++|++.+++ ...+..
T Consensus 80 ~~i~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~ 151 (1045)
T 1k32_A 80 ADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGIN--------FVPLNL 151 (1045)
T ss_dssp EEEEEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTE--------EEECCS
T ss_pred CeEEEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCC--------eEEecC
Confidence 47999999988854444477777 89999999996666632 358888887764 234443
Q ss_pred cCCCeEEEEEcCCCCeEEEeec------------CCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccc
Q 038577 140 CNDKVTALNWSPDSNYLLVGSK------------DLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVN 207 (860)
Q Consensus 140 h~~~v~~l~~s~d~~~l~s~~~------------dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~ 207 (860)
+. ...++|+| | ++++++. +....+|..... .....+.+|...+.++.|+++ .
T Consensus 152 ~~--~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~------~~~~~l~~~~~~v~~~~~s~d-~----- 215 (1045)
T 1k32_A 152 GP--ATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS------GAFKKIVDMSTHVSSPVIVGH-R----- 215 (1045)
T ss_dssp CS--CSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEET------TEEEEEECCSSCCEEEEEETT-E-----
T ss_pred CC--cceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCC------CCeEECcCCCCcccceEEeCC-E-----
Confidence 33 35678999 8 8888753 345677765443 234556899999999999988 5
Q ss_pred eEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCe
Q 038577 208 RIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGV 287 (860)
Q Consensus 208 ~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~ 287 (860)
.+++++.|+.+.+|.+..... ....+..+. .+...+|+|+|+.++++ .++.
T Consensus 216 l~~~~~~dg~~~l~~~~~~g~---------------------------~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~ 266 (1045)
T 1k32_A 216 IYFITDIDGFGQIYSTDLDGK---------------------------DLRKHTSFT-DYYPRHLNTDGRRILFS-KGGS 266 (1045)
T ss_dssp EEEEECTTSSCEEEEEETTSC---------------------------SCEECCCCC-SSCEEEEEESSSCEEEE-ETTE
T ss_pred EEEEEeccCceEEEEEeCCCC---------------------------cceEecCCC-CcceeeEcCCCCEEEEE-eCCE
Confidence 788888899999998764221 001111222 35567999999999887 5899
Q ss_pred EEEEECCCceeEEEEee-----------cCceeEEEEEe-eCCCEEEEEEccCCcEEEEEccCceEEEEecCccc-CeEE
Q 038577 288 FGLYQMPDFVCIHLLSI-----------SREKITTAVFN-ELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYF-DVNC 354 (860)
Q Consensus 288 i~~~~~~~~~~~~~~~~-----------~~~~i~~~~~s-~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~-~v~~ 354 (860)
|++|++... .+..+.. +...+..++|+ |||+.++++. ++.+.+|+..++.... +..|.. .+..
T Consensus 267 i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 342 (1045)
T 1k32_A 267 IYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVSGTYVLK-VPEPLRIRYVR 342 (1045)
T ss_dssp EEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTTSSBEEE-CSCCSCEEEEE
T ss_pred EEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCCCCceEE-ccCCCcceEEe
Confidence 999999443 3334443 23368999999 9999999887 4899999998876543 556666 8999
Q ss_pred EEEcCCCCEEEEEeCCCcEE-EEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCC
Q 038577 355 LAYSPDSQLLATGADDNKVK-VWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPS 433 (860)
Q Consensus 355 ~~~s~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~ 433 (860)
++|+ +|+.+++++.++.+. +|++.++.... +..|...+..++|+|||++|++++.++.+++||+.+++....... +
T Consensus 343 ~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~-~ 419 (1045)
T 1k32_A 343 RGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS-R 419 (1045)
T ss_dssp ECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-S
T ss_pred eeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC-C
Confidence 9999 999999999888888 99998776544 447888999999999999999999999999999998877665533 4
Q ss_pred CCcEEEEEECCCCCEEEEEecCC---------CeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 038577 434 SRQFVSLASDQSGEVICAGTLDS---------FEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLW 504 (860)
Q Consensus 434 ~~~~~~~~~~~~~~~l~~~~~~~---------~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iw 504 (860)
...+..++|+|||+++++++.++ ..|++||+.+++ ...+..|...+..++|+|||++|++++.++...+|
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 45678899999999998877643 489999999887 67777888889999999999999999988777777
Q ss_pred EccCCcc-------------------------------------------eeEEcccCCCeEEEEEeeCCCEEEE-----
Q 038577 505 NVFEGKG-------------------------------------------SVESFPHTHDVLTVVYRPDGRQLAC----- 536 (860)
Q Consensus 505 d~~~~~~-------------------------------------------~~~~~~~~~~v~~~~~s~~~~~l~~----- 536 (860)
+...... ...+..+...+..++++|||.++++
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g 578 (1045)
T 1k32_A 499 DRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 578 (1045)
T ss_dssp CSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCC
T ss_pred chhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccC
Confidence 6432210 1122235577899999999987875
Q ss_pred --------EeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEE
Q 038577 537 --------STLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMY 608 (860)
Q Consensus 537 --------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vw 608 (860)
......|.+||+.+++..... . .+.+++|||||++|++++.+ .|++|
T Consensus 579 ~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~---------------------~v~~~~~S~DG~~l~~~~~~-~i~~~ 633 (1045)
T 1k32_A 579 EFAAYYQGAPEKGVLLKYDVKTRKVTEVK---N---------------------NLTDLRLSADRKTVMVRKDD-GKIYT 633 (1045)
T ss_dssp SHHHHHHCCCCCEEEEEEETTTCCEEEEE---E---------------------EEEEEEECTTSCEEEEEETT-SCEEE
T ss_pred cccccccccCCCceEEEEECCCCcEEEee---c---------------------CcceEEECCCCCEEEEEcCC-cEEEE
Confidence 123457899999888754332 2 27899999999999998876 79999
Q ss_pred ECCCce
Q 038577 609 DVADQV 614 (860)
Q Consensus 609 d~~~~~ 614 (860)
|+.+++
T Consensus 634 d~~~~~ 639 (1045)
T 1k32_A 634 FPLEKP 639 (1045)
T ss_dssp EESSCT
T ss_pred eCccCc
Confidence 998876
No 19
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.8e-40 Score=337.81 Aligned_cols=291 Identities=22% Similarity=0.324 Sum_probs=266.2
Q ss_pred eccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc
Q 038577 257 KDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW 336 (860)
Q Consensus 257 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~ 336 (860)
...+.+|...|.+++|+|+++++++++.||.|++||+.++..+..+..+...+.+++|+|+++++++++.+ +.|++||+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i~vwd~ 84 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNY 84 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEET
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-CEEEEEEC
Confidence 34566788999999999999999999999999999999999999999999999999999999999998876 99999999
Q ss_pred cCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-eeEEEeecCCCceEEEEEee-CCCEEEEEeCCCc
Q 038577 337 RSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSG-FCFVTFTEHTNAVTALHFMA-NNHSLLSASLDGT 414 (860)
Q Consensus 337 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~ 414 (860)
.+++.+..+.+|...|.+++|+|+++++++|+.|++|++||+.++ .....+.+|...|.+++|+| ++..|++++.|+.
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999999999999877 55677889999999999999 6789999999999
Q ss_pred EEEEEccccceeeEeeCCCCCcEEEEEECC--CCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEE
Q 038577 415 VRAWDLFRYRNFRTFTTPSSRQFVSLASDQ--SGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATL 492 (860)
Q Consensus 415 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 492 (860)
|++||+.+......+...+...+..+.++| ++.++++++.|+ .|++||+++++.+..+.+|...|.+++|+|++++|
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~-~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 243 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDL-TIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTS-EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCC-eEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEE
Confidence 999999988877777777767788888876 788999999999 99999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCC--EEEEEeCCCeEEEEeCCC
Q 038577 493 ASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGR--QLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 493 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~iwd~~~ 550 (860)
++++.||+|++||+.+++....+..|...+.+++|+|++. ++++|+.|| +.+|++.+
T Consensus 244 ~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 244 ISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 9999999999999999988888888999999999999875 577777655 77887754
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.8e-42 Score=356.76 Aligned_cols=321 Identities=16% Similarity=0.128 Sum_probs=241.3
Q ss_pred EEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcC------CCcEEEEEcccCeEE---
Q 038577 18 AVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDE------NQRCHFINLHCHVVL--- 87 (860)
Q Consensus 18 ~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~------d~~i~vwd~~~~~~~--- 87 (860)
+.+. ++.++....+.....|++.... +..|...|.+++|||||++||+++. |+.|++|+..++...
T Consensus 11 ~d~g~~~~~~~~~g~~~~~~w~~p~~~----p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~ 86 (357)
T 4g56_B 11 VDLGTENLYFQSNGSSKGSAWGRPVTA----PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL 86 (357)
T ss_dssp ---------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG
T ss_pred CCCCccceEEecCCCccccccCCCCCC----cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE
Confidence 4445 5555555555778999886543 3479999999999999999999987 678999998776543
Q ss_pred --EEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeE
Q 038577 88 --HRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAV 165 (860)
Q Consensus 88 --~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v 165 (860)
....|...|.+++|+|++++++++.++.|+|||+.+++.... ......+|.+.|++++|+|++++|++++.|+.|
T Consensus 87 ~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~---~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v 163 (357)
T 4g56_B 87 CTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLV---NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSV 163 (357)
T ss_dssp CSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CC---CCEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred ecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEE---EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 334588899999999999999888999999999988763211 123456899999999999999999999999999
Q ss_pred EEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCC
Q 038577 166 RLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTP 245 (860)
Q Consensus 166 ~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~ 245 (860)
++||+.++ .....+.+|...|.+++|++++.. .+++++.|++|++||+.++...
T Consensus 164 ~iwd~~~~------~~~~~~~~h~~~v~~v~~s~~~~~----~~~s~~~dg~v~~wd~~~~~~~---------------- 217 (357)
T 4g56_B 164 KVWDLSQK------AVLKSYNAHSSEVNCVAACPGKDT----IFLSCGEDGRILLWDTRKPKPA---------------- 217 (357)
T ss_dssp EEEETTTT------EEEEEECCCSSCEEEEEECTTCSS----CEEEEETTSCEEECCTTSSSCB----------------
T ss_pred EEEECCCC------cEEEEEcCCCCCEEEEEEccCCCc----eeeeeccCCceEEEECCCCcee----------------
Confidence 99999988 678889999999999999998753 7899999999999999875431
Q ss_pred cceeeeEEeeeeccccCCCCceEEEEecCCC-CEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEE
Q 038577 246 ERRVKKWGLLRKDDFSQAPSKVTACDYHRGL-DMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFG 324 (860)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 324 (860)
.......+...+.+++|+|++ .++++|+.|+.|++||+.+++.+..+..+...|.+++|+|++..++++
T Consensus 218 ----------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 218 ----------TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp ----------CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEE
T ss_pred ----------eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEE
Confidence 112233456779999999985 678899999999999999999999999999999999999998654444
Q ss_pred EccCCcEEEEEccCceEEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCe
Q 038577 325 CAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSP-DSQLLATGADDNKVKVWTVSSGF 382 (860)
Q Consensus 325 ~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~ 382 (860)
++.|+.|++||+++++.+.. .+|...|++++|+| ++.+|++++.||+|++|++.+..
T Consensus 288 gs~D~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 288 ISEDCTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EETTSCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EeCCCEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 45569999999999887765 47999999999998 79999999999999999997543
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.9e-40 Score=335.95 Aligned_cols=294 Identities=17% Similarity=0.281 Sum_probs=264.1
Q ss_pred eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 038577 297 VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVW 376 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 376 (860)
+...++..|.+.|.+++|+|+++++++++.+ |.|++||+.++..+..+..|..+|.+++|+|++++|++|+.|+.|++|
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~d-g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYS-GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETT-SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCC-CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEE
Confidence 4466788899999999999999999998876 999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECC-CCCEEEEEecC
Q 038577 377 TVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQ-SGEVICAGTLD 455 (860)
Q Consensus 377 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~ 455 (860)
|+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.++.........+...+.+++|+| ++..+++++.|
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999988666555556677899999999 67899999999
Q ss_pred CCeEEEEECCCCceEEEe-cCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCC
Q 038577 456 SFEIFVWSMKTGRLLDIL-SGHEGPVHGLVFSP--TNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGR 532 (860)
Q Consensus 456 ~~~i~v~d~~~~~~~~~~-~~h~~~v~~l~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~ 532 (860)
+ .|++||+.++.....+ .+|...+..+.|+| ++++|++++.|++|++||+.+++....+.+|...|.+++|+|+++
T Consensus 163 ~-~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 241 (304)
T 2ynn_A 163 R-TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (304)
T ss_dssp S-EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred C-eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCC
Confidence 9 9999999887766555 45668899999987 778999999999999999999988888889999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCC--EEEEecCCCeEEEEEC
Q 038577 533 QLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGS--YILAGGSSKYICMYDV 610 (860)
Q Consensus 533 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~--~l~~~~~dg~v~vwd~ 610 (860)
+|++++.||.|++||+.+++++..+..+.. .+.+++|+|++. ++++|+.|| +.+|++
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~asg~~~g-~~~~~~ 300 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKTLNVGLE--------------------RSWCIATHPTGRKNYIASGFDNG-FTVLSL 300 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCSSS--------------------SEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCceeeeccCCCc--------------------cEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence 999999999999999999999999987764 489999999886 577776655 778877
Q ss_pred CCc
Q 038577 611 ADQ 613 (860)
Q Consensus 611 ~~~ 613 (860)
.+.
T Consensus 301 ~~~ 303 (304)
T 2ynn_A 301 GND 303 (304)
T ss_dssp C--
T ss_pred ccC
Confidence 653
No 22
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-40 Score=360.89 Aligned_cols=339 Identities=11% Similarity=0.133 Sum_probs=288.2
Q ss_pred eEEEEECCCCcEEeeccCCccCeeEEEEcCCCC-EEEEEcCCCcEEEEEc----ccCe------EEEEeec---------
Q 038577 33 RVSVTDLIKSKTVTLPVESSSNICRIAVSPDGT-FLLTVDENQRCHFINL----HCHV------VLHRVRF--------- 92 (860)
Q Consensus 33 ~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~-~la~~~~d~~i~vwd~----~~~~------~~~~~~~--------- 92 (860)
.+.+|+............|...|++++|+|+|+ +||+++.||.|++||+ .+++ ....+.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccccccc
Confidence 366888877766655556779999999999999 9999999999999999 8888 4555543
Q ss_pred --CCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEe
Q 038577 93 --KYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFY 169 (860)
Q Consensus 93 --~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd 169 (860)
...|++++|+|++++|+++ .++.|++|| .+++ ....+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGA-------LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSC-------EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCC-------eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 5589999999999999999 789999999 3333 4678889999999999999999999999999999999
Q ss_pred ecccccCcccccceEeecCCCc---------------EEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCcccc
Q 038577 170 VKEKLKGIHTNKPFLLLGHRDS---------------VVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETM 234 (860)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~h~~~---------------i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~ 234 (860)
+.++ .....+..+... +.++.|++++ .+++++.||.|++|++.++..
T Consensus 178 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~i~~~d~~~~~~------ 239 (425)
T 1r5m_A 178 VISG------TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD------KFVIPGPKGAIFVYQITEKTP------ 239 (425)
T ss_dssp TTTT------EEEEEECCC---------------CCCBSCCEEEETT------EEEEECGGGCEEEEETTCSSC------
T ss_pred CCCC------cEEEEeeccccCccceeeccccCCcceeeEEEEcCCC------EEEEEcCCCeEEEEEcCCCce------
Confidence 9887 556667777666 8899999986 799999999999999987532
Q ss_pred CCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEE
Q 038577 235 EDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVF 314 (860)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~ 314 (860)
...+..+...|.+++|+|+++++++++.+|.|++|++.+++....+..+...+.+++|
T Consensus 240 ----------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 297 (425)
T 1r5m_A 240 ----------------------TGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASW 297 (425)
T ss_dssp ----------------------SEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEE
T ss_pred ----------------------eeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEE
Confidence 2233467788999999999999999999999999999999999999989999999999
Q ss_pred eeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe------------
Q 038577 315 NELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF------------ 382 (860)
Q Consensus 315 s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~------------ 382 (860)
+|++ .+++++.+ +.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|++||+.++.
T Consensus 298 ~~~~-~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 375 (425)
T 1r5m_A 298 VGDD-KVISCSMD-GSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDG 375 (425)
T ss_dssp ETTT-EEEEEETT-SEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-----------
T ss_pred CCCC-EEEEEeCC-CcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeeccccc
Confidence 9999 66666554 999999999999999999999999999999999999999999999999999887
Q ss_pred --------eEEEeecCCC--ceEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q 038577 383 --------CFVTFTEHTN--AVTALHFMANNHSLLSASLDGTVRAWDLF 421 (860)
Q Consensus 383 --------~~~~~~~~~~--~v~~i~~~~~~~~l~s~~~dg~i~~wd~~ 421 (860)
.+..+..|.. .|.+++|+|++++|++++.||.|++|++.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 376 ILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ---CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 8889999976 99999999999999999999999999974
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=339.63 Aligned_cols=288 Identities=21% Similarity=0.298 Sum_probs=265.9
Q ss_pred cccCCCCceEEEEecCC----CCEEEEEEcCCeEEEEECCCcee--EEEEeecCceeEEEEEeeCCCEEEEEEccCCcEE
Q 038577 259 DFSQAPSKVTACDYHRG----LDMVVVGFSNGVFGLYQMPDFVC--IHLLSISREKITTAVFNELGNWLVFGCAKLGQLL 332 (860)
Q Consensus 259 ~~~~~~~~v~~~~~~~~----~~~l~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~ 332 (860)
...+|...|.+++|+|+ +.+|++|+.|+.|++|++.+.+. ...+.+|...|.+++|++++..+++++.+ +.|+
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D-~~i~ 105 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD-AHIR 105 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT-SEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC-CcEE
Confidence 34578999999999885 57899999999999999876654 45678899999999999999998888766 9999
Q ss_pred EEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCC
Q 038577 333 VWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLD 412 (860)
Q Consensus 333 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d 412 (860)
+||+.+++.+..+..|...+.+++|+|++++|++++.||.|++|++.+++....+..|...|.+++|+|++++|++++.|
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~d 185 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 185 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCC
Confidence 99999999999998999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEE
Q 038577 413 GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATL 492 (860)
Q Consensus 413 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 492 (860)
|.|++||+.+++.+..+.. +...+.+++|+|++++|++++.|+ .|++||+++++....+.+|...|.+++|+|++++|
T Consensus 186 g~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spd~~~l~s~s~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEG-HAMPIRSLTFSPDSQLLVTASDDG-YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp SCEEEEETTTTEEEEEECC-CSSCCCEEEECTTSCEEEEECTTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCCcEEEEEcc-cCCceeEEEEcCCCCEEEEEcCCC-eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence 9999999999988877764 445789999999999999999998 99999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q 038577 493 ASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 493 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 549 (860)
++++.|++|++||+.+++....+..|...|.+++|+|++++|++++.||.|++||..
T Consensus 264 ~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999888888999999999999999999999999999999963
No 24
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-40 Score=347.95 Aligned_cols=327 Identities=17% Similarity=0.196 Sum_probs=243.1
Q ss_pred eEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeec------CCeEEEEee
Q 038577 97 NAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSK------DLAVRLFYV 170 (860)
Q Consensus 97 ~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~------dg~v~vwd~ 170 (860)
..+.+.+++.++...++.....|+++... ...|...|++++|||||++||+++. |+.|++|+.
T Consensus 9 sg~d~g~~~~~~~~~g~~~~~~w~~p~~~-----------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~ 77 (357)
T 4g56_B 9 SGVDLGTENLYFQSNGSSKGSAWGRPVTA-----------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKD 77 (357)
T ss_dssp ------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESS
T ss_pred cCCCCCccceEEecCCCccccccCCCCCC-----------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEEC
Confidence 34566777777777777888999876443 3579999999999999999999997 778999988
Q ss_pred cccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceee
Q 038577 171 KEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVK 250 (860)
Q Consensus 171 ~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (860)
.++... ........+|...|.+++|+|++ .+++++.||+|++||+.++..
T Consensus 78 ~~~~~~--~~~~~~~~~~~~~V~~~~~s~d~------~~l~~s~dg~v~lWd~~~~~~---------------------- 127 (357)
T 4g56_B 78 PEGAPN--ESLCTAGVQTEAGVTDVAWVSEK------GILVASDSGAVELWEILEKES---------------------- 127 (357)
T ss_dssp CC---C--GGGCSEEEECSSCEEEEEEETTT------EEEEEETTSCEEEC-----------------------------
T ss_pred CCCCcc--eeEecccCCCCCCEEEEEEcCCC------CEEEEECCCEEEEeeccccce----------------------
Confidence 766111 12334556788889999999887 466677788888887765321
Q ss_pred eEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCc
Q 038577 251 KWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQ 330 (860)
Q Consensus 251 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~ 330 (860)
...
T Consensus 128 ------------------------------------------------~~~----------------------------- 130 (357)
T 4g56_B 128 ------------------------------------------------LLV----------------------------- 130 (357)
T ss_dssp -------------------------------------------------CC-----------------------------
T ss_pred ------------------------------------------------eEE-----------------------------
Confidence 000
Q ss_pred EEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCC-EEEEE
Q 038577 331 LLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNH-SLLSA 409 (860)
Q Consensus 331 i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~ 409 (860)
......+|...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|++++. .++++
T Consensus 131 ----------~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 131 ----------NKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp ----------CCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEE
T ss_pred ----------EeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeee
Confidence 0011246888999999999999999999999999999999999999999999999999999874 78999
Q ss_pred eCCCcEEEEEccccceeeEeeC-CCCCcEEEEEECCCC-CEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcC
Q 038577 410 SLDGTVRAWDLFRYRNFRTFTT-PSSRQFVSLASDQSG-EVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSP 487 (860)
Q Consensus 410 ~~dg~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~ 487 (860)
+.||.|++||+++++....+.. .....+.+++|+|++ .++++++.++ .|++||+++++.+..+.+|...|++++|+|
T Consensus 201 ~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp 279 (357)
T 4g56_B 201 GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-NVSLVNIKNPDSAQTSAVHSQNITGLAYSY 279 (357)
T ss_dssp ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-CEEEEESSCGGGCEEECCCSSCEEEEEECS
T ss_pred ccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-ceeEEECCCCcEeEEEeccceeEEEEEEcC
Confidence 9999999999999887766653 345578999999985 6788888888 999999999999999999999999999999
Q ss_pred CC-CEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEee-CCCEEEEEeCCCeEEEEeCCCCce
Q 038577 488 TN-ATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRP-DGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 488 ~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
++ ++|++++.|++|++||+.+++ +....+|...|++++|+| ++++|++++.||+|++|++.+...
T Consensus 280 ~~~~~lasgs~D~~i~iwd~~~~~-~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 280 HSSPFLASISEDCTVAVLDADFSE-VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp SSSCCEEEEETTSCEEEECTTSCE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred CCCCEEEEEeCCCEEEEEECCCCc-EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 87 579999999999999999887 556678999999999998 899999999999999999976433
No 25
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-39 Score=339.35 Aligned_cols=296 Identities=25% Similarity=0.388 Sum_probs=262.5
Q ss_pred EEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEE
Q 038577 133 LIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTI 212 (860)
Q Consensus 133 ~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~ 212 (860)
....+.+|.+.|.+++|+||+++|++++.||+|++||..+. .....+..|...|.+++|+|++. .++++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~------~~~~~~~~~~~~v~~~~~sp~g~-----~lasg 124 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT------NKEHAVTMPCTWVMACAYAPSGC-----AIACG 124 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC------CEEEEEECSSSCCCEEEECTTSS-----EEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC------CcceEEecCCCCEEEEEECCCCC-----EEEEe
Confidence 56789999999999999999999999999999999998877 56677888999999999999999 99999
Q ss_pred cCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEE
Q 038577 213 ARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQ 292 (860)
Q Consensus 213 ~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~ 292 (860)
+.|+.+++|++......
T Consensus 125 ~~d~~i~v~~~~~~~~~--------------------------------------------------------------- 141 (354)
T 2pbi_B 125 GLDNKCSVYPLTFDKNE--------------------------------------------------------------- 141 (354)
T ss_dssp STTSEEEEEECCCCTTC---------------------------------------------------------------
T ss_pred eCCCCEEEEEEeccccc---------------------------------------------------------------
Confidence 99999999987653210
Q ss_pred CCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcC--CCCEEEEEeCC
Q 038577 293 MPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSP--DSQLLATGADD 370 (860)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d 370 (860)
........+..|...+.+++|+|++..+++++.+ +.|++||+++++.+..+.+|...|.+++++| +++.|++|+.|
T Consensus 142 -~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 142 -NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD-GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp -CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT-SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred -cccccceeeeccCCcEEEEEEeCCCCEEEEEeCC-CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 0001122334567788888899888888887766 9999999999999999999999999999988 57899999999
Q ss_pred CcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCC-CCcEEEEEECCCCCEE
Q 038577 371 NKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPS-SRQFVSLASDQSGEVI 449 (860)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 449 (860)
|.|++||+++++++..+..|...|.+++|+|++..|++++.|++|++||+++.+....+.... ...+.+++|+|++.++
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l 299 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLL 299 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEE
Confidence 999999999999999999999999999999999999999999999999999887766665432 3468899999999999
Q ss_pred EEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 038577 450 CAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWN 505 (860)
Q Consensus 450 ~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 505 (860)
++++.|+ .|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||+|++|+
T Consensus 300 ~~g~~d~-~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 300 FAGYNDY-TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEETTS-CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEECCC-cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999998 999999999999999999999999999999999999999999999996
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.9e-39 Score=338.93 Aligned_cols=290 Identities=23% Similarity=0.324 Sum_probs=262.5
Q ss_pred eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 038577 297 VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVW 376 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 376 (860)
+....+.+|...|.+++|+|+++.+++++.+ |.|++||..++.....+..|...|.+++|+|+|..+++|+.|+.+++|
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~D-g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQD-GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCC-CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 4567788999999999999999999988766 999999999999888888899999999999999999999999999999
Q ss_pred ECCCC------eeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECC--CCCE
Q 038577 377 TVSSG------FCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQ--SGEV 448 (860)
Q Consensus 377 d~~~~------~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 448 (860)
++... .....+..|...|.+++|+|++..|++++.|++|++||+.+++....+..+ ...+.++.++| ++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH-GADVLCLDLAPSETGNT 212 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEECCCSSCCE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeCCCCCE
Confidence 98643 345667789999999999999999999999999999999999988887754 45788888877 5789
Q ss_pred EEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc--cCCCeEEEE
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP--HTHDVLTVV 526 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~ 526 (860)
+++++.|+ .|++||+++++.+..+.+|...|.+++|+|++.+|++++.|++|++||+...+....... +...+.+++
T Consensus 213 l~sgs~Dg-~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 213 FVSGGCDK-KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp EEEEETTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred EEEEeCCC-eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 99999999 999999999999999999999999999999999999999999999999988765444433 345789999
Q ss_pred EeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEE
Q 038577 527 YRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYIC 606 (860)
Q Consensus 527 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~ 606 (860)
|+|++++|++++.|+.|++||+.+++.+..+.+|.. .|++++|+|||++|++++.||.|+
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~--------------------~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN--------------------RVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--------------------CEEEEEECTTSSCEEEEETTSEEE
T ss_pred EeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC--------------------cEEEEEECCCCCEEEEEcCCCCEE
Confidence 999999999999999999999999999999888875 599999999999999999999999
Q ss_pred EEE
Q 038577 607 MYD 609 (860)
Q Consensus 607 vwd 609 (860)
+|+
T Consensus 352 vW~ 354 (354)
T 2pbi_B 352 VWA 354 (354)
T ss_dssp EEC
T ss_pred ecC
Confidence 996
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-40 Score=353.88 Aligned_cols=326 Identities=15% Similarity=0.256 Sum_probs=288.1
Q ss_pred CCCCceEEEEecCCCC-EEEEEEcCCeEEEEEC----CCce------eEEEEee----------cCceeEEEEEeeCCCE
Q 038577 262 QAPSKVTACDYHRGLD-MVVVGFSNGVFGLYQM----PDFV------CIHLLSI----------SREKITTAVFNELGNW 320 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~-~l~~~~~~g~i~~~~~----~~~~------~~~~~~~----------~~~~i~~~~~s~~~~~ 320 (860)
.|...|.+++|+|+++ +|++|+.||.|++|++ .+++ ....+.. +...|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 3457899999999999 9999999999999999 8887 4555554 5679999999999999
Q ss_pred EEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCc-------
Q 038577 321 LVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNA------- 393 (860)
Q Consensus 321 l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------- 393 (860)
+++++.+ |.|++|| .++.....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..+...
T Consensus 123 l~~~~~d-g~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 123 IVTGVEN-GELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEETT-SCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEeCC-CeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 9998876 9999999 677788888899999999999999999999999999999999999999998888777
Q ss_pred --------eEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECC
Q 038577 394 --------VTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMK 465 (860)
Q Consensus 394 --------v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~ 465 (860)
+.+++|++++ .+++++.||.|++||+.+++....+. .+...+.+++++|+++++++++.++ .|++||+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~-~i~i~d~~ 277 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLLSASDDG-TLRIWHGG 277 (425)
T ss_dssp -----CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEEEEETTS-CEEEECSS
T ss_pred cccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEEEEcCCC-EEEEEECC
Confidence 9999999986 68899999999999999988777765 3456899999999999999999998 99999999
Q ss_pred CCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEE
Q 038577 466 TGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHF 545 (860)
Q Consensus 466 ~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 545 (860)
+++.+..+.+|...|.+++|+|++ ++++++.||.|++||+.+++.......|...+.+++|+|++++|++++.||.|++
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 356 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNV 356 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEE
Confidence 999999999999999999999999 9999999999999999999877778889999999999999999999999999999
Q ss_pred EeCCCCc--------------------eeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeE
Q 038577 546 WDPLNGE--------------------LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYI 605 (860)
Q Consensus 546 wd~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v 605 (860)
||+.+++ .+..+.+|.. +..|++++|+|++++|++++.||.|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 357 YDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD------------------NDYIFDLSWNCAGNKISVAYSLQEG 418 (425)
T ss_dssp EECHHHHC--------------CEECCEEEEECCTTC------------------CCCEEEEEECTTSSEEEEEESSSCC
T ss_pred EECCCCccceeeeecccccccCcccchhhhhhcCccc------------------CCceEEEEccCCCceEEEEecCceE
Confidence 9999887 5666665532 0159999999999999999999999
Q ss_pred EEEECC
Q 038577 606 CMYDVA 611 (860)
Q Consensus 606 ~vwd~~ 611 (860)
++||++
T Consensus 419 ~iw~~~ 424 (425)
T 1r5m_A 419 SVVAIP 424 (425)
T ss_dssp EEEECC
T ss_pred EEEeec
Confidence 999986
No 28
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.5e-41 Score=355.58 Aligned_cols=313 Identities=17% Similarity=0.271 Sum_probs=268.9
Q ss_pred CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-cCCceeEEEECCCCCEEE
Q 038577 31 GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-FKYPVNAILFSPNGKYIA 109 (860)
Q Consensus 31 ~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~~~~v~~~~fspdg~~la 109 (860)
+..+..|+..+......+.+|.+.|++++|+|+|++||+++.|++|+|||+.+++.+..+. |...|.+++|+|+|++||
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~la 124 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVA 124 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEE
T ss_pred cccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEE
Confidence 4456678888888888888999999999999999999999999999999999999998888 889999999999999999
Q ss_pred EE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCC-CeEEEeecCCeEEEEeecccccCcccccceEe--
Q 038577 110 VG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDS-NYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLL-- 185 (860)
Q Consensus 110 ~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-- 185 (860)
++ .|+.+++|++.+.............+.+|.+.|.+++|+|++ ..|++++.|++|++||+.++ .....+
T Consensus 125 s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~------~~~~~~~~ 198 (380)
T 3iz6_a 125 CGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG------QRISIFGS 198 (380)
T ss_dssp ECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC------CEEEEECC
T ss_pred EeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC------cEEEEeec
Confidence 99 899999999976432111111345678999999999999975 57999999999999999987 334444
Q ss_pred ---ecCCCcEEEEEEcc-CCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeecccc
Q 038577 186 ---LGHRDSVVGCFFSV-DKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFS 261 (860)
Q Consensus 186 ---~~h~~~i~~~~~~~-~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (860)
.+|...|.++.|++ ++. .+++++.|++|++||+..... ....+.
T Consensus 199 ~~~~~h~~~v~~~~~~~~~~~-----~l~sgs~D~~v~~wd~~~~~~---------------------------~~~~~~ 246 (380)
T 3iz6_a 199 EFPSGHTADVLSLSINSLNAN-----MFISGSCDTTVRLWDLRITSR---------------------------AVRTYH 246 (380)
T ss_dssp CSSSSCCSCEEEEEECSSSCC-----EEEEEETTSCEEEEETTTTCC---------------------------CCEEEC
T ss_pred ccCCCCccCeEEEEeecCCCC-----EEEEEECCCeEEEEECCCCCc---------------------------ceEEEC
Confidence 68999999999977 666 999999999999999874211 123456
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCc-------eeEEEEEeeCCCEEEEEEccCCcEEEE
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISRE-------KITTAVFNELGNWLVFGCAKLGQLLVW 334 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~-------~i~~~~~s~~~~~l~~~~~~~g~i~v~ 334 (860)
+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..+.. .+.+++|+|+|+++++++.+ |.|++|
T Consensus 247 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-g~i~vw 325 (380)
T 3iz6_a 247 GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-GDCYVW 325 (380)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-SCEEEE
T ss_pred CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-CCEEEE
Confidence 7888999999999999999999999999999999998887765432 38999999999999988765 999999
Q ss_pred EccCceEEEEe----cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 038577 335 EWRSESYILKQ----QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF 382 (860)
Q Consensus 335 d~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 382 (860)
|...++....+ .+|...|.+++|+|+|.+|++|+.||.|++|++...+
T Consensus 326 d~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 326 DTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99998888776 6799999999999999999999999999999987543
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=339.65 Aligned_cols=304 Identities=15% Similarity=0.124 Sum_probs=239.6
Q ss_pred EEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcc------------cCeEEEEeecCCceeEEEE
Q 038577 34 VSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLH------------CHVVLHRVRFKYPVNAILF 101 (860)
Q Consensus 34 i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~------------~~~~~~~~~~~~~v~~~~f 101 (860)
.+.|++..... ..|...|.+++|||||++|++++ |+++++||.. .+.......+...|.+++|
T Consensus 16 ~r~w~~~~~~~----~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 16 AREWNLPPNAP----ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp -------CCSC----SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred ccccCCCCCCc----ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence 45677655432 35777899999999999999887 6777777632 1223334456788999999
Q ss_pred CCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCccccc
Q 038577 102 SPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNK 181 (860)
Q Consensus 102 spdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 181 (860)
+||+.+++.+.|+.|+|||+.+++.. ......+.+|.+.|++++|+|||++|++|+.|++|++||+.++ ..
T Consensus 91 s~d~~l~~~s~dg~v~lWd~~~~~~~---~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~------~~ 161 (344)
T 4gqb_B 91 VGERGILVASDSGAVELWELDENETL---IVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ------VV 161 (344)
T ss_dssp ETTTEEEEEETTSEEEEEEECTTSSC---EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT------EE
T ss_pred eCCCeEEEEECCCEEEEEeccCCCce---eEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC------cE
Confidence 99987666668999999999988642 1223456689999999999999999999999999999999988 67
Q ss_pred ceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeecccc
Q 038577 182 PFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFS 261 (860)
Q Consensus 182 ~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (860)
...+.+|.+.|.+++|++++.. .+++++.|++|++||+.++.. .......
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~----~l~s~s~D~~v~iwd~~~~~~--------------------------~~~~~~~ 211 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDS----VFLSCSEDNRILLWDTRCPKP--------------------------ASQIGCS 211 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTT----EEEEEETTSCEEEEETTSSSC--------------------------EEECC--
T ss_pred EEEEcCcCCceEEEEecCCCCC----ceeeeccccccccccccccce--------------------------eeeeecc
Confidence 8899999999999999999853 689999999999999987543 1111223
Q ss_pred CCCCceEEEEecCC-CCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce
Q 038577 262 QAPSKVTACDYHRG-LDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES 340 (860)
Q Consensus 262 ~~~~~v~~~~~~~~-~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~ 340 (860)
.+...+.+++|+|+ ++++++|+.||.|++||+.+++.+..+..|...|.+++|+|++..++++++.|+.|++||..+++
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 45567899999995 56788999999999999999999999999999999999999996544444455999999999887
Q ss_pred EEEEecCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe
Q 038577 341 YILKQQGHYFDVNCLAYSPDSQ-LLATGADDNKVKVWTVSSGF 382 (860)
Q Consensus 341 ~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~ 382 (860)
.. .+.+|...|++++|+|++. +|++++.||+|++|++.+..
T Consensus 292 ~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 292 LF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 65 5689999999999999986 57789999999999997653
No 30
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-40 Score=351.48 Aligned_cols=309 Identities=22% Similarity=0.359 Sum_probs=268.2
Q ss_pred EEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEE
Q 038577 288 FGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATG 367 (860)
Q Consensus 288 i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 367 (860)
+..|+..+..+...+.+|.+.|.+++|+|+++++++++.+ |.|++||..+++....+..|...|.+++|+|+|+++++|
T Consensus 48 ~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D-~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 48 AVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQD-GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETT-SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred ccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe
Confidence 3446666777888999999999999999999999988876 999999999999999999999999999999999999999
Q ss_pred eCCCcEEEEECCCCe-------eEEEeecCCCceEEEEEeeCC-CEEEEEeCCCcEEEEEccccceeeEee----CCCCC
Q 038577 368 ADDNKVKVWTVSSGF-------CFVTFTEHTNAVTALHFMANN-HSLLSASLDGTVRAWDLFRYRNFRTFT----TPSSR 435 (860)
Q Consensus 368 ~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~----~~~~~ 435 (860)
+.|+.+++|++.+.. ....+.+|.+.|.++.|.|++ ..|++++.|++|++||+.+++....+. ..+..
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 999999999987532 344677899999999999974 579999999999999999998887663 34556
Q ss_pred cEEEEEECC-CCCEEEEEecCCCeEEEEECC-CCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCccee
Q 038577 436 QFVSLASDQ-SGEVICAGTLDSFEIFVWSMK-TGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSV 513 (860)
Q Consensus 436 ~~~~~~~~~-~~~~l~~~~~~~~~i~v~d~~-~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 513 (860)
.+.++++++ ++.++++++.|+ .|++||++ .++.+..+.+|.+.|.+++|+|++++|++++.||+|++||+.++....
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~-~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~ 285 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDT-TVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQ 285 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTS-CEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEE
T ss_pred CeEEEEeecCCCCEEEEEECCC-eEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEE
Confidence 789999976 889999999999 99999998 567888999999999999999999999999999999999999987655
Q ss_pred EEccc-------CCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEE
Q 038577 514 ESFPH-------THDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTT 586 (860)
Q Consensus 514 ~~~~~-------~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 586 (860)
.+..+ ...+++++|+|+|++|++|+.||.|++||+.+++.+..+.... ..|...|++
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~----------------~~h~~~v~~ 349 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQ----------------NSHEGRISC 349 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSC----------------SSCCCCCCE
T ss_pred EecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEeccc----------------CCCCCceEE
Confidence 54432 2348999999999999999999999999999998887763211 112346999
Q ss_pred EEEecCCCEEEEecCCCeEEEEECCCce
Q 038577 587 LCYSADGSYILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 587 l~~s~~g~~l~~~~~dg~v~vwd~~~~~ 614 (860)
++|+|||++|++|+.||+|++|++...+
T Consensus 350 l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 350 LGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 9999999999999999999999998653
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=337.09 Aligned_cols=304 Identities=20% Similarity=0.293 Sum_probs=249.6
Q ss_pred EEeeccCCcc-CeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEE--e--ecCCceeEEEECCCCCEEEEE-eCCeEE
Q 038577 44 TVTLPVESSS-NICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHR--V--RFKYPVNAILFSPNGKYIAVG-TGKLVQ 117 (860)
Q Consensus 44 ~~~~~~~h~~-~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~--~--~~~~~v~~~~fspdg~~la~~-~~~~i~ 117 (860)
.+..+.+|.. .|.+++|||+|++||+++.|++|+|||+.++..... + .|...|.+++|+|+|++||++ .|+.++
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTC 86 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEE
Confidence 4555668987 899999999999999999999999999998865432 2 288999999999999999999 789999
Q ss_pred EEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEE
Q 038577 118 IWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFF 197 (860)
Q Consensus 118 iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 197 (860)
+|+...+. ..+...+.+|.+.|.+++|+|++++|++++.|+.|++||+...... .....+.+|...|.+++|
T Consensus 87 iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~---~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 87 IWKKNQDD-----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY---ECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEEECCC------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE---EEEEEECCCCSCEEEEEE
T ss_pred EEEccCCC-----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe---EEEEEecCcCCCeEEEEE
Confidence 99988764 2256788999999999999999999999999999999999876111 335677899999999999
Q ss_pred ccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCC
Q 038577 198 SVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLD 277 (860)
Q Consensus 198 ~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 277 (860)
+|++. +|++++.|++|++|+...+. |. ....+.+|...|.+++|+|+++
T Consensus 159 ~p~~~-----~l~s~s~d~~i~~w~~~~~~------------------------~~--~~~~~~~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 159 HPSQE-----LLASASYDDTVKLYREEEDD------------------------WV--CCATLEGHESTVWSLAFDPSGQ 207 (345)
T ss_dssp CSSSS-----CEEEEETTSCEEEEEEETTE------------------------EE--EEEEECCCSSCEEEEEECTTSS
T ss_pred CCCCC-----EEEEEeCCCcEEEEEecCCC------------------------EE--EEEEecCCCCceEEEEECCCCC
Confidence 99999 99999999999999987642 11 1234567889999999999999
Q ss_pred EEEEEEcCCeEEEEECCC---------------ceeEEEEee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce-
Q 038577 278 MVVVGFSNGVFGLYQMPD---------------FVCIHLLSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES- 340 (860)
Q Consensus 278 ~l~~~~~~g~i~~~~~~~---------------~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~- 340 (860)
+|++++.||.|++|+... ..++..+.. |...|.+++|+|++..+++++.+ +.+++|+...+.
T Consensus 208 ~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d-~~i~vw~~~~~~~ 286 (345)
T 3fm0_A 208 RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGD-DAIRVFQEDPNSD 286 (345)
T ss_dssp EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETT-SCEEEEEECTTSC
T ss_pred EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCC-CeEEEEEeCCCCC
Confidence 999999999999998521 133444444 67789999999999999998876 999999987542
Q ss_pred -------E-EEEecCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEe
Q 038577 341 -------Y-ILKQQGHYFDVNCLAYSPDS-QLLATGADDNKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 341 -------~-~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~ 387 (860)
. .....+|...|.+++|+|++ .+|++|+.||.|++|++.+++.....
T Consensus 287 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 287 PQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp TTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-------
T ss_pred cceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 1 12235799999999999998 49999999999999999887765443
No 32
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.4e-39 Score=329.52 Aligned_cols=299 Identities=18% Similarity=0.263 Sum_probs=255.2
Q ss_pred eeEEEEeecCceeEEEEEeeCC-CEEEEEEccCCcEEEEEccC-----ceEEEEecCcccCeEEEEEcCCCCEEEEEeCC
Q 038577 297 VCIHLLSISREKITTAVFNELG-NWLVFGCAKLGQLLVWEWRS-----ESYILKQQGHYFDVNCLAYSPDSQLLATGADD 370 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~~~g~i~v~d~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 370 (860)
....++.+|.+.|.+++|+|++ +.+++++. |+.|++|++.. +..+..+.+|...|.+++|+|+++++++|+.|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~-D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASR-DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEET-TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecC-CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 4456788999999999999977 56666655 59999999864 34566778999999999999999999999999
Q ss_pred CcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCC-----
Q 038577 371 NKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQS----- 445 (860)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~----- 445 (860)
++|++||+.+++.+..+.+|...|.+++|+|++.++++++.|+.|++||+.. +....+. .+...+.++.+.|.
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~-~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLL-GHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEEC-CCSSCEEEEEECCC-----
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEe-ccCCcEEEEEEccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999964 4444443 34567899999885
Q ss_pred -CCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEE
Q 038577 446 -GEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLT 524 (860)
Q Consensus 446 -~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 524 (860)
+..+++++.|+ .|++||+++++....+.+|..+|.+++|+|++++|++++.||.|++||+.+++....+. +...+.+
T Consensus 165 ~~~~l~s~~~d~-~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~ 242 (319)
T 3frx_A 165 DSVTIISAGNDK-MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-AQDEVFS 242 (319)
T ss_dssp -CCEEEEEETTS-CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE-CCSCEEE
T ss_pred CccEEEEEeCCC-EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCcEEE
Confidence 45899999998 99999999999999999999999999999999999999999999999999987555544 5578999
Q ss_pred EEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCe
Q 038577 525 VVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKY 604 (860)
Q Consensus 525 ~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~ 604 (860)
++|+|++.+|++++.+ .+++|++..+..+..+..+... ....+...+.+++|+|||++|++|+.||.
T Consensus 243 ~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~spdg~~l~sg~~Dg~ 309 (319)
T 3frx_A 243 LAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAG------------YSKAAEPHAVSLAWSADGQTLFAGYTDNV 309 (319)
T ss_dssp EEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTT------------CCGGGCCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccc------------cccCcCcceeEEEECCCCCEEEEeecCce
Confidence 9999999999998855 5999999988777766543211 00112335899999999999999999999
Q ss_pred EEEEECCCc
Q 038577 605 ICMYDVADQ 613 (860)
Q Consensus 605 v~vwd~~~~ 613 (860)
|++||+.++
T Consensus 310 i~vWd~~t~ 318 (319)
T 3frx_A 310 IRVWQVMTA 318 (319)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEeec
Confidence 999999764
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=335.44 Aligned_cols=287 Identities=17% Similarity=0.157 Sum_probs=238.4
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECC-----------CceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCc
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMP-----------DFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQ 330 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~-----------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~ 330 (860)
.+...|.+++|+|||++|++++ ++.+++||.. ..........+...|.+++|+|++ .+++++. ||.
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~-dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD-SGA 104 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET-TSE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC-CCE
Confidence 4566799999999999888776 6667777521 111112223345679999999985 5666655 499
Q ss_pred EEEEEccCceEEE----EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCC-CE
Q 038577 331 LLVWEWRSESYIL----KQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANN-HS 405 (860)
Q Consensus 331 i~v~d~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~ 405 (860)
|++||+.+++... ...+|...|++++|+|+|++|++|+.|++|++||+.+++++..+.+|...|.+++|++++ ..
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 9999999876433 335899999999999999999999999999999999999999999999999999999988 47
Q ss_pred EEEEeCCCcEEEEEccccceeeEeeCC-CCCcEEEEEECCC-CCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEE
Q 038577 406 LLSASLDGTVRAWDLFRYRNFRTFTTP-SSRQFVSLASDQS-GEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGL 483 (860)
Q Consensus 406 l~s~~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l 483 (860)
+++++.|+.|++||+++++....+... ....+.+++++|+ ++++++|+.|+ .|++||+++++.+..+.+|...|+++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-~v~~wd~~~~~~~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-TVSLVDTKSTSCVLSSAVHSQCVTGL 263 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-EEEEEESCC--CCEEEECCSSCEEEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-cEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 899999999999999999888777543 3446889999985 56788888888 99999999999999999999999999
Q ss_pred EEcCCC-CEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCC-EEEEEeCCCeEEEEeCCCCce
Q 038577 484 VFSPTN-ATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGR-QLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 484 ~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~ 553 (860)
+|+|++ ++|++++.|++|++||+.+++ +....+|...|++++|+|+++ +|++++.||+|++|++.+...
T Consensus 264 ~fsp~g~~~lasgs~D~~i~vwd~~~~~-~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 264 VFSPHSVPFLASLSEDCSLAVLDSSLSE-LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTCCE-EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEccCCCeEEEEEeCCCeEEEEECCCCc-EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 999998 579999999999999998886 566789999999999999986 677999999999999987543
No 34
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-39 Score=332.71 Aligned_cols=305 Identities=23% Similarity=0.324 Sum_probs=239.0
Q ss_pred eEEEEEeeccCC-CeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceE
Q 038577 131 FELIRTLADCND-KVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRI 209 (860)
Q Consensus 131 ~~~~~~~~~h~~-~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l 209 (860)
..++..+.+|.+ .|.+++|+|+|++||+++.|+.|++||+..+ ... .......+|...|.+++|+|+++ +|
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~-~~~--~~~~~~~~h~~~v~~~~~sp~g~-----~l 76 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD-SWI--CKSVLSEGHQRTVRKVAWSPCGN-----YL 76 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT-EEE--EEEEECSSCSSCEEEEEECTTSS-----EE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC-cce--eeeeeccccCCcEEEEEECCCCC-----EE
Confidence 446788999988 9999999999999999999999999999876 110 11223367999999999999988 89
Q ss_pred EEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEE
Q 038577 210 YTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFG 289 (860)
Q Consensus 210 ~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 289 (860)
++++.|+++++|+...+..
T Consensus 77 ~s~s~D~~v~iw~~~~~~~------------------------------------------------------------- 95 (345)
T 3fm0_A 77 ASASFDATTCIWKKNQDDF------------------------------------------------------------- 95 (345)
T ss_dssp EEEETTSCEEEEEECCC-E-------------------------------------------------------------
T ss_pred EEEECCCcEEEEEccCCCe-------------------------------------------------------------
Confidence 9999999999998765210
Q ss_pred EEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc---eEEEEecCcccCeEEEEEcCCCCEEEE
Q 038577 290 LYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE---SYILKQQGHYFDVNCLAYSPDSQLLAT 366 (860)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~ 366 (860)
+.+..+..|...|.+++|+|+++.+++++.+ +.|++||+.++ ..+..+.+|...|.+++|+|++++|++
T Consensus 96 -------~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 96 -------ECVTTLEGHENEVKSVAWAPSGNLLATCSRD-KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp -------EEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred -------EEEEEccCCCCCceEEEEeCCCCEEEEEECC-CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 1223334455556666666666666555544 66777776554 345566789999999999999999999
Q ss_pred EeCCCcEEEEECCCCe--eEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc---------------ceeeEe
Q 038577 367 GADDNKVKVWTVSSGF--CFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY---------------RNFRTF 429 (860)
Q Consensus 367 ~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~---------------~~~~~~ 429 (860)
++.|+.|++||..++. +...+.+|...|.+++|+|++++|++++.|++|++|+.... +++..+
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTL 247 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEE
T ss_pred EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEe
Confidence 9999999999998775 45688899999999999999999999999999999997432 223344
Q ss_pred eCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc---------eEEEecCcccCeEEEEEcCCC-CEEEEEeCCC
Q 038577 430 TTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR---------LLDILSGHEGPVHGLVFSPTN-ATLASSSWDK 499 (860)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~---------~~~~~~~h~~~v~~l~~s~~~-~~l~s~~~dg 499 (860)
...+...+.+++++|++..+++++.|+ .|++|+...+. ......+|...|++++|+|++ .+||+++.||
T Consensus 248 ~~~h~~~v~~v~~~~~~~~l~s~~~d~-~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg 326 (345)
T 3fm0_A 248 SGFHSRTIYDIAWCQLTGALATACGDD-AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG 326 (345)
T ss_dssp CSSCSSCEEEEEECTTTCCEEEEETTS-CEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTS
T ss_pred cCCCCCcEEEEEEecCCCEEEEEeCCC-eEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCC
Confidence 444667899999999999999999998 99999987542 122346899999999999998 5999999999
Q ss_pred cEEEEEccCCccee
Q 038577 500 TVRLWNVFEGKGSV 513 (860)
Q Consensus 500 ~i~iwd~~~~~~~~ 513 (860)
+|++|++.+.+...
T Consensus 327 ~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 327 EVAFWKYQRPEGLH 340 (345)
T ss_dssp CEEEEEECC-----
T ss_pred cEEEEEecCCCCcc
Confidence 99999998876443
No 35
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=2.5e-37 Score=370.48 Aligned_cols=534 Identities=12% Similarity=0.068 Sum_probs=395.3
Q ss_pred CccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEe-----CC--eEEEEeCCC
Q 038577 51 SSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGT-----GK--LVQIWRSPG 123 (860)
Q Consensus 51 h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~-----~~--~i~iwd~~~ 123 (860)
+...+.+++||| ++||+++. +.|++|++.+++......|...+.+++|||||++||++. ++ .|++|++.+
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~ 89 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN 89 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC
Confidence 456789999996 58888775 789999999998777667999999999999999999883 23 799999988
Q ss_pred CCcccceeEEEEEeeccCCCe-------EEEEEcCCCCeEEEeecC------CeEEEEeecccccCcccccceEeecCCC
Q 038577 124 FKKEVFAFELIRTLADCNDKV-------TALNWSPDSNYLLVGSKD------LAVRLFYVKEKLKGIHTNKPFLLLGHRD 190 (860)
Q Consensus 124 ~~~~~~~~~~~~~~~~h~~~v-------~~l~~s~d~~~l~s~~~d------g~v~vwd~~~~~~~~~~~~~~~~~~h~~ 190 (860)
++ ...+..|...+ ..++|||||+.+++++.+ ..|.+|++.++ ....+..+.
T Consensus 90 g~--------~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g-------~~~~l~~~~- 153 (1045)
T 1k32_A 90 GE--------IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGI-------NFVPLNLGP- 153 (1045)
T ss_dssp TE--------EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGT-------EEEECCSCS-
T ss_pred CC--------eEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCC-------CeEEecCCC-
Confidence 75 46788888888 999999999977777644 35777777665 223333332
Q ss_pred cEEEEEEccCCCCCccceEEEEcCC------------ccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeec
Q 038577 191 SVVGCFFSVDKKTDKVNRIYTIARD------------CYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKD 258 (860)
Q Consensus 191 ~i~~~~~~~~~~~~~~~~l~s~~~d------------g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (860)
...+.|+| | .+++++.+ ....+|....+ . ...
T Consensus 154 -~~~~~~sp-G------~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~-~---------------------------~~~ 197 (1045)
T 1k32_A 154 -ATHILFAD-G------RRVIGRNTFELPHWKGYRGGTRGKIWIEVNS-G---------------------------AFK 197 (1045)
T ss_dssp -CSEEEEET-T------EEEEEESCSCCTTSTTCCSTTCCEEEEEEET-T---------------------------EEE
T ss_pred -cceeeeCC-C------EEEEeccCCCccccccccCCCcCCEEEECCC-C---------------------------CeE
Confidence 23566888 4 57776532 23444432221 0 112
Q ss_pred cccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCC-ceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc
Q 038577 259 DFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPD-FVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 259 ~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~ 337 (860)
.+..+...+.++.|+++ ..++++..+|.+.+|.+.. +.....+..+. .+...+|+|||+.++++. ++.|.+|+..
T Consensus 198 ~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~--~~~i~~~d~~ 273 (1045)
T 1k32_A 198 KIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK--GGSIYIFNPD 273 (1045)
T ss_dssp EEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE--TTEEEEECTT
T ss_pred ECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe--CCEEEEecCC
Confidence 22567888999999998 6666777888888887643 33444444443 466779999999999874 4899999995
Q ss_pred CceEEEEecC-----------cccCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCC-ceEEEEEeeCCC
Q 038577 338 SESYILKQQG-----------HYFDVNCLAYS-PDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTN-AVTALHFMANNH 404 (860)
Q Consensus 338 ~~~~~~~~~~-----------~~~~v~~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~i~~~~~~~ 404 (860)
..... .+.. |...+.+++|+ |||+.+++++ ++.+.+|+..++... .+..|.. .+..++|+ +++
T Consensus 274 ~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 274 TEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp TCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEE
T ss_pred ceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCC
Confidence 54433 4444 33468999999 9999999888 789999999877654 4566777 89999999 999
Q ss_pred EEEEEeCCCcEE-EEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEE
Q 038577 405 SLLSASLDGTVR-AWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGL 483 (860)
Q Consensus 405 ~l~s~~~dg~i~-~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l 483 (860)
.++.++.++.+. +|++.+++.. .+. .+...+..++++|+|++|++++.++ .+++||+.+++....+.+|.+.+.++
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~-~l~-~~~~~~~~~~~SpDG~~la~~~~~~-~v~~~d~~tg~~~~~~~~~~~~v~~~ 426 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAE-KFE-ENLGNVFAMGVDRNGKFAVVANDRF-EIMTVDLETGKPTVIERSREAMITDF 426 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEE-ECC-CCCCSEEEEEECTTSSEEEEEETTS-EEEEEETTTCCEEEEEECSSSCCCCE
T ss_pred eEEEEECCCceEEEEECCCCCce-Eec-CCccceeeeEECCCCCEEEEECCCC-eEEEEECCCCceEEeccCCCCCccce
Confidence 999998888888 8898776543 333 4556789999999999999999888 99999999999888888899999999
Q ss_pred EEcCCCCEEEEEeCCC----------cEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCce
Q 038577 484 VFSPTNATLASSSWDK----------TVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 484 ~~s~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
+|||||++|++++.++ .|++||+.+++ ...+..|...+..++|+|||++|++++.++...+|+......
T Consensus 427 ~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~ 505 (1045)
T 1k32_A 427 TISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNF 505 (1045)
T ss_dssp EECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCE
T ss_pred EECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcccc
Confidence 9999999999887654 89999999876 666677888899999999999999999988888898664432
Q ss_pred e-------EEEecccccCCC---------------cccc-ccccccccCCCCcEEEEEEecCCCEEEE------------
Q 038577 554 M-------YTIEGRRDISGG---------------RLMT-DRRSAANSSSGKCFTTLCYSADGSYILA------------ 598 (860)
Q Consensus 554 ~-------~~~~~~~~~~~~---------------~~~~-~~~~~~~~~~~~~i~~l~~s~~g~~l~~------------ 598 (860)
. ..+....+.... .... .........+...+..++++|||+++++
T Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~ 585 (1045)
T 1k32_A 506 SFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQ 585 (1045)
T ss_dssp ECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHH
T ss_pred ccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCccccccc
Confidence 1 111111000000 0000 0011112234567899999999998885
Q ss_pred -ecCCCeEEEEECCCceEEEEEeecccccccceeeeccCCCCCCCCCCccccCCCCCccccccccccCccccCCCCCCCC
Q 038577 599 -GGSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNSKNMTEAGPMDLIDDDNSDTEEGVEKQTRGKLDYDLPGALPN 677 (860)
Q Consensus 599 -~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 677 (860)
.+....|.+||+.+++... +.
T Consensus 586 ~~~~~~~l~~~d~~~~~~~~-l~--------------------------------------------------------- 607 (1045)
T 1k32_A 586 GAPEKGVLLKYDVKTRKVTE-VK--------------------------------------------------------- 607 (1045)
T ss_dssp CCCCCEEEEEEETTTCCEEE-EE---------------------------------------------------------
T ss_pred ccCCCceEEEEECCCCcEEE-ee---------------------------------------------------------
Confidence 1234578888988876421 10
Q ss_pred CCCCccceeEEEECCCCCeEEEeccccEEEEecCCcc
Q 038577 678 RGRPTIQTKCLKIAPTGRNFVAATTEGVLVYSIDESF 714 (860)
Q Consensus 678 ~~~~~~~~~~~~~spdg~~~~~~~~~g~~i~~~~~~~ 714 (860)
..+..+++||||+.+++++.+++.+|+++...
T Consensus 608 -----~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 608 -----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp -----EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred -----cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 15678899999999999998888899986544
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5e-39 Score=335.82 Aligned_cols=320 Identities=18% Similarity=0.263 Sum_probs=283.2
Q ss_pred CCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceE--
Q 038577 264 PSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESY-- 341 (860)
Q Consensus 264 ~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~-- 341 (860)
...+.+++++|+|+.++++..++.+..|.............|...|.+++|+|+++.+++++ +|.+++||+.++..
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCS
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC--CCeEEEEECCCCCcee
Confidence 34688999999999999998888877777766666666667889999999999999999887 49999999987642
Q ss_pred -EEEe--cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--eEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEE
Q 038577 342 -ILKQ--QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF--CFVTFTEHTNAVTALHFMANNHSLLSASLDGTVR 416 (860)
Q Consensus 342 -~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 416 (860)
...+ ..|...|.+++|+|+++++++++.||.|++||+.+++ ....+..|...|.+++|+|+++++++++.||.|+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 166 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA 166 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 2222 3788999999999999999999999999999999877 6677888999999999999999999999999999
Q ss_pred EEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEe
Q 038577 417 AWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSS 496 (860)
Q Consensus 417 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 496 (860)
+||+.+++....+.. +...+.+++++|+++++++++.++ .|++||+++++.+..+. |...+.+++|+|+++++++++
T Consensus 167 ~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg-~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 167 VWDLHNQTLVRQFQG-HTDGASCIDISNDGTKLWTGGLDN-TVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCCceeeeeec-ccCceEEEEECCCCCEEEEEecCC-cEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEc
Confidence 999999888777765 455799999999999999999998 99999999999888775 788999999999999999999
Q ss_pred CCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCcccccccccc
Q 038577 497 WDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAA 576 (860)
Q Consensus 497 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (860)
.|+.|++||+.+++ ......|...+.+++|+|++++|++++.||.|++||+.+++.+......
T Consensus 244 ~~~~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~---------------- 306 (337)
T 1gxr_A 244 ESSNVEVLHVNKPD-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKES---------------- 306 (337)
T ss_dssp TTSCEEEEETTSSC-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS----------------
T ss_pred CCCcEEEEECCCCC-eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCC----------------
Confidence 99999999998886 5567789999999999999999999999999999999999887554432
Q ss_pred ccCCCCcEEEEEEecCCCEEEEecCCCeEEEEEC
Q 038577 577 NSSSGKCFTTLCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 577 ~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
..+.+++|+|++++|++++.||.|++|++
T Consensus 307 -----~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 307 -----SSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp -----SCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred -----CcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 24999999999999999999999999996
No 37
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7e-38 Score=322.24 Aligned_cols=297 Identities=21% Similarity=0.279 Sum_probs=245.3
Q ss_pred eEEEEEeeccCCCeEEEEEcCCC-CeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceE
Q 038577 131 FELIRTLADCNDKVTALNWSPDS-NYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRI 209 (860)
Q Consensus 131 ~~~~~~~~~h~~~v~~l~~s~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l 209 (860)
+.+...+.+|.+.|.+++|+|++ ++|++++.|++|++|++... ..........+.+|...|.+++|+|++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~dg-------- 77 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGD-DQKFGVPVRSFKGHSHIVQDCTLTADG-------- 77 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEE-TTEEEEEEEEEECCSSCEEEEEECTTS--------
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCC-CccccccceEEeCCcccEEEEEECCCC--------
Confidence 45678899999999999999965 89999999999999998764 110011233445555555555555554
Q ss_pred EEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEE
Q 038577 210 YTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFG 289 (860)
Q Consensus 210 ~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~ 289 (860)
+++++++.||.|+
T Consensus 78 -------------------------------------------------------------------~~l~s~s~D~~v~ 90 (319)
T 3frx_A 78 -------------------------------------------------------------------AYALSASWDKTLR 90 (319)
T ss_dssp -------------------------------------------------------------------SEEEEEETTSEEE
T ss_pred -------------------------------------------------------------------CEEEEEeCCCEEE
Confidence 4555555555555
Q ss_pred EEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCC------CCE
Q 038577 290 LYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPD------SQL 363 (860)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~------~~~ 363 (860)
+||+.+++....+..|...|.+++|+|++..+++++.+ +.|++||++. ..+..+.+|...|.+++++|. +..
T Consensus 91 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D-~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 168 (319)
T 3frx_A 91 LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD-KTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVT 168 (319)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT-SCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCE
T ss_pred EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccE
Confidence 55555666667778888999999999999999988776 9999999974 566677899999999999985 458
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEEC
Q 038577 364 LATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASD 443 (860)
Q Consensus 364 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 443 (860)
+++++.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||+.+++....+... ..+.+++|+
T Consensus 169 l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~s 246 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVFSLAFS 246 (319)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEEEEEEC
T ss_pred EEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEEEEEEc
Confidence 999999999999999999999999999999999999999999999999999999999999988887754 479999999
Q ss_pred CCCCEEEEEecCCCeEEEEECCCCceEEEec--------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q 038577 444 QSGEVICAGTLDSFEIFVWSMKTGRLLDILS--------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 444 ~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~--------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 509 (860)
|++.+++++..+ .+++|++..+..+..+. .|...+.+++|+|||++|++++.||.|++||+.++
T Consensus 247 p~~~~la~~~~~--~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 247 PNRYWLAAATAT--GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp SSSSEEEEEETT--EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CCCCEEEEEcCC--CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 999999988765 59999999887776654 34667999999999999999999999999998764
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-38 Score=330.49 Aligned_cols=305 Identities=18% Similarity=0.295 Sum_probs=251.9
Q ss_pred eeEEEEeecCceeEEEEE-----ee-CCCEEEEEEccCCcEEEEEccC-------ceEEEEecCcccCeEEEEEcCCCCE
Q 038577 297 VCIHLLSISREKITTAVF-----NE-LGNWLVFGCAKLGQLLVWEWRS-------ESYILKQQGHYFDVNCLAYSPDSQL 363 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~-----s~-~~~~l~~~~~~~g~i~v~d~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~ 363 (860)
+....+.+|.+.|.+++| ++ +++.|++++.+ +.|++||+.+ +.....+.+|...|.+++|+|++.+
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D-~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRD-KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETT-SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCC-CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 455678899999999999 66 88888888766 9999999874 3456677899999999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee-CCCCCcEEEEEE
Q 038577 364 LATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT-TPSSRQFVSLAS 442 (860)
Q Consensus 364 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~ 442 (860)
+++|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.......... ..+...+.++++
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 9999999999999999999999999999999999999999999999999999999997433222111 245567999999
Q ss_pred CCCC----------CEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce
Q 038577 443 DQSG----------EVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS 512 (860)
Q Consensus 443 ~~~~----------~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 512 (860)
+|++ .++++++.|+ .|++|| ..++....+.+|...|.+++|+|++++|++++.||.|++||+......
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~-~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDG-RLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTS-EEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred ccccccccccCCCCCEEEEEcCCC-EEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 9987 7899999998 999999 456777888999999999999999999999999999999999554444
Q ss_pred eEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeE--EEecccccCCCccccccccccccCCCCcEEEEEEe
Q 038577 513 VESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMY--TIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYS 590 (860)
Q Consensus 513 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s 590 (860)
.....+...|.+++|+|++.++++++ |+.|++||+.+++... .+..+... .......+...|.+++|+
T Consensus 249 ~~~~~~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 249 QREFDAGSTINQIAFNPKLQWVAVGT-DQGVKIFNLMTQSKAPVCTIEAEPIT---------KAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp SEEEECSSCEEEEEECSSSCEEEEEE-SSCEEEEESSSCCSCSEEECCCCSGG---------GBTTBCCSCCCEEEEEEC
T ss_pred ceeecCCCcEEEEEECCCCCEEEEEC-CCCEEEEEeCCCCCCceEEeecCcch---------hhhhhcCCCCceEEEEEC
Confidence 44445667899999999999887664 7779999998876544 33211100 000112344569999999
Q ss_pred cCCCEEEEecCCCeEEEEECCCce
Q 038577 591 ADGSYILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 591 ~~g~~l~~~~~dg~v~vwd~~~~~ 614 (860)
|+|++|++|+.||.|++|+++++.
T Consensus 319 p~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 319 ALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp SSSCCEEEEETTSEEEEEEEEEEE
T ss_pred CCCCeEEEecCCceEEEEEEEccC
Confidence 999999999999999999998764
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.7e-38 Score=325.49 Aligned_cols=291 Identities=22% Similarity=0.365 Sum_probs=269.8
Q ss_pred eccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc
Q 038577 257 KDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW 336 (860)
Q Consensus 257 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~ 336 (860)
...+.+|...|.+++|+|+++++++++.||.|++|+..+++....+..|...|.+++|+|+++.+++++.+ +.|++||+
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~vwd~ 94 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD-KTLKIWDV 94 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEET
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC-CEEEEEEC
Confidence 44567899999999999999999999999999999999999999999999999999999999999988776 99999999
Q ss_pred cCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEE
Q 038577 337 RSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVR 416 (860)
Q Consensus 337 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 416 (860)
.+++.+..+.+|...|.+++|+|+++++++|+.||.|++||+.+++.+..+..|..+|.+++|+|+++++++++.||.|+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEE---EEEcCCCCEEE
Q 038577 417 AWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHG---LVFSPTNATLA 493 (860)
Q Consensus 417 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~---l~~s~~~~~l~ 493 (860)
+||+.+++....+.......+..++++|+++++++++.++ .|++||+++++.+..+.+|...+.+ ....+++.+|+
T Consensus 175 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 253 (312)
T 4ery_A 175 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV 253 (312)
T ss_dssp EEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTT-EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEE
T ss_pred EEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCC-eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEE
Confidence 9999999888888777777899999999999999999998 9999999999999999988765433 23346789999
Q ss_pred EEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEe--CCCeEEEEeCC
Q 038577 494 SSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACST--LDGQIHFWDPL 549 (860)
Q Consensus 494 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~ 549 (860)
+++.||.|++||+.+++....+.+|...|.+++|+|+++++++++ .|+.|++|+.+
T Consensus 254 sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 254 SGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999988888889999999999999999999997 69999999864
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.5e-38 Score=336.24 Aligned_cols=285 Identities=24% Similarity=0.451 Sum_probs=253.8
Q ss_pred ecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCccc------------------CeEEEEEcCCCCEEE
Q 038577 304 ISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYF------------------DVNCLAYSPDSQLLA 365 (860)
Q Consensus 304 ~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~------------------~v~~~~~s~~~~~l~ 365 (860)
.|...|.+++|+|+|+++++++ + +.+++|++.+++.+..+..|.. .|.+++|+|+|++|+
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~-~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-N-KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-B-SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-C-CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 5888999999999999999875 3 8999999999988877755432 389999999999999
Q ss_pred EEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECC-
Q 038577 366 TGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQ- 444 (860)
Q Consensus 366 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~- 444 (860)
+|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++....+.. ...+.+++++|
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~ 217 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPG 217 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECST
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc--CCCcEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999888777664 34689999999
Q ss_pred CCCEEEEEecCCCeEEEEECCCCceEEEe-------cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-------
Q 038577 445 SGEVICAGTLDSFEIFVWSMKTGRLLDIL-------SGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGK------- 510 (860)
Q Consensus 445 ~~~~l~~~~~~~~~i~v~d~~~~~~~~~~-------~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~------- 510 (860)
+++++++++.|+ .|++||+++++.+..+ .+|...|.+++|+|++++|++++.||.|++||+.+..
T Consensus 218 ~~~~l~~~s~d~-~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 218 DGKYIAAGSLDR-AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TCCEEEEEETTS-CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCEEEEEcCCC-cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 899999999998 9999999999888776 5799999999999999999999999999999997632
Q ss_pred -----ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEE
Q 038577 511 -----GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFT 585 (860)
Q Consensus 511 -----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 585 (860)
....+.+|...|.+++|+|++.+|++++.||.|++||+.+++++..+.+|.. .|.
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~--------------------~v~ 356 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN--------------------SVI 356 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC--------------------CEE
Confidence 2345567999999999999999999999999999999999999999998875 599
Q ss_pred EEEEec------CCCEEEEecCCCeEEEEECCCc
Q 038577 586 TLCYSA------DGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 586 ~l~~s~------~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
+++|++ ++++|++|+.||.|++|++...
T Consensus 357 ~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 357 SVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 999886 6889999999999999998643
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-41 Score=360.35 Aligned_cols=345 Identities=15% Similarity=0.211 Sum_probs=286.3
Q ss_pred ceEEEEecCCCC-EEEEE----------EcCCeEEEEECCCce---eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcE
Q 038577 266 KVTACDYHRGLD-MVVVG----------FSNGVFGLYQMPDFV---CIHLLSISREKITTAVFNELGNWLVFGCAKLGQL 331 (860)
Q Consensus 266 ~v~~~~~~~~~~-~l~~~----------~~~g~i~~~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i 331 (860)
.+.+++|+|+++ ++++| +.||.|++|++.++. ....+ .+...|.+++|+|+++++++++.+ |.|
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-g~v 91 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDN-GSL 91 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESS-SCE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccC-CeE
Confidence 577899999987 88898 889999999998775 33333 467799999999999999988776 999
Q ss_pred EEEEccC----ceEEEEecCcccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCe------eEE---EeecCCCceEEE
Q 038577 332 LVWEWRS----ESYILKQQGHYFDVNCLAYSPD-SQLLATGADDNKVKVWTVSSGF------CFV---TFTEHTNAVTAL 397 (860)
Q Consensus 332 ~v~d~~~----~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~------~~~---~~~~~~~~v~~i 397 (860)
++||+.+ ......+.+|...|.+++|+|+ +.+|++++.||.|++||+.++. ... ....|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 9999988 4577888899999999999998 8999999999999999999876 332 336789999999
Q ss_pred EEeeC-CCEEEEEeCCCcEEEEEccccceeeEeeCCC-----CCcEEEEEECCCC-CEEEEEecCC--CeEEEEECCCC-
Q 038577 398 HFMAN-NHSLLSASLDGTVRAWDLFRYRNFRTFTTPS-----SRQFVSLASDQSG-EVICAGTLDS--FEIFVWSMKTG- 467 (860)
Q Consensus 398 ~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~l~~~~~~~--~~i~v~d~~~~- 467 (860)
+|+|+ +..+++++.||.|++||+.+++....+.... ...+.+++++|++ .++++++.++ +.|++||++++
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 99999 7899999999999999999998888887654 6689999999998 5777777664 27999999986
Q ss_pred ceEEEec-CcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCC-CEEEEEeCCCeEE
Q 038577 468 RLLDILS-GHEGPVHGLVFSP-TNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDG-RQLACSTLDGQIH 544 (860)
Q Consensus 468 ~~~~~~~-~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~ 544 (860)
+.+..+. +|...|.+++|+| ++++|++++.||.|++||+.+++....+..|...|.+++|+|++ .+|++++.||.|+
T Consensus 252 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 252 TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6777787 8999999999999 99999999999999999999998888888999999999999999 8999999999999
Q ss_pred EEeCCCCceeEEEec--------------ccc--cCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEE
Q 038577 545 FWDPLNGELMYTIEG--------------RRD--ISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMY 608 (860)
Q Consensus 545 iwd~~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vw 608 (860)
+||+.++........ +.. ........... .....+..++++++|+|||++|++++.|+.|++|
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w 410 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHL-QAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSIT 410 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCC-CCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCB
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccc-cCCccccCCccceEEeeCCeEEEEeCCCCeEEEE
Confidence 999988765433211 000 00000000011 1122245678899999999999999999999999
Q ss_pred ECCCc
Q 038577 609 DVADQ 613 (860)
Q Consensus 609 d~~~~ 613 (860)
++.++
T Consensus 411 ~~~~~ 415 (416)
T 2pm9_A 411 NPKIS 415 (416)
T ss_dssp CCCCC
T ss_pred EeccC
Confidence 99875
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-37 Score=320.97 Aligned_cols=293 Identities=23% Similarity=0.436 Sum_probs=263.8
Q ss_pred ceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 038577 296 FVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKV 375 (860)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 375 (860)
......+..|...|.+++|+|+++++++++.+ |.+++|+..+++....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~d-g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeCC-CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 45566778899999999999999999988766 99999999999999999999999999999999999999999999999
Q ss_pred EECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecC
Q 038577 376 WTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLD 455 (860)
Q Consensus 376 wd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 455 (860)
||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+.+++....+..+ ...+.+++++|+++++++++.|
T Consensus 92 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 92 WDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAH-SDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCC-CCcEEEEEEcCCCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999998888777643 4579999999999999999999
Q ss_pred CCeEEEEECCCCceEEEec-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeE--EEEE-eeCC
Q 038577 456 SFEIFVWSMKTGRLLDILS-GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVL--TVVY-RPDG 531 (860)
Q Consensus 456 ~~~i~v~d~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~--~~~~-s~~~ 531 (860)
+ .|++||+++++.+..+. .+..++..++|+|++++|++++.||.|++||+.+++....+..|..... ...+ .+++
T Consensus 171 ~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 171 G-LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp S-CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred C-cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 8 99999999998887764 5667899999999999999999999999999999987777776665432 2334 4678
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec--CCCeEEEEE
Q 038577 532 RQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG--SSKYICMYD 609 (860)
Q Consensus 532 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~--~dg~v~vwd 609 (860)
.+|++++.||.|++||+.+++.+..+.+|.. .|.+++|+|++++|++++ .|+.|++|+
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--------------------~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD--------------------VVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSS--------------------CEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCC--------------------cEEEEeecCcCCceEEEEccCCccEEEec
Confidence 8999999999999999999999999998876 599999999999999986 699999998
Q ss_pred CC
Q 038577 610 VA 611 (860)
Q Consensus 610 ~~ 611 (860)
.+
T Consensus 310 ~d 311 (312)
T 4ery_A 310 SD 311 (312)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-40 Score=357.86 Aligned_cols=342 Identities=12% Similarity=0.119 Sum_probs=281.7
Q ss_pred CccCeeEEEEcCCCC-EEEEE----------cCCCcEEEEEcccCe---EEEEeecCCceeEEEECCCCCEEEEE-eCCe
Q 038577 51 SSSNICRIAVSPDGT-FLLTV----------DENQRCHFINLHCHV---VLHRVRFKYPVNAILFSPNGKYIAVG-TGKL 115 (860)
Q Consensus 51 h~~~v~~va~spdg~-~la~~----------~~d~~i~vwd~~~~~---~~~~~~~~~~v~~~~fspdg~~la~~-~~~~ 115 (860)
+...|.+++|||+|+ +||++ +.|+.|++||+.++. .+..+.|...|.+++|+|++++|+++ .++.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 446789999999997 99999 889999999999875 55566688999999999999999998 7899
Q ss_pred EEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCC-CCeEEEeecCCeEEEEeecccccCc---ccccceEeecCCCc
Q 038577 116 VQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPD-SNYLLVGSKDLAVRLFYVKEKLKGI---HTNKPFLLLGHRDS 191 (860)
Q Consensus 116 i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d-~~~l~s~~~dg~v~vwd~~~~~~~~---~~~~~~~~~~h~~~ 191 (860)
|++||+.+.... ......+.+|...|.+++|+|+ +++|++++.|+.|++||+....... .........+|...
T Consensus 91 v~vw~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 91 LELYSTNEANNA---INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp EEEECCSSTTSC---CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred EEEeeccccccc---ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCC
Confidence 999999872210 1146788999999999999998 8999999999999999998872000 00122345789999
Q ss_pred EEEEEEccC-CCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEE
Q 038577 192 VVGCFFSVD-KKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTAC 270 (860)
Q Consensus 192 i~~~~~~~~-~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 270 (860)
|.+++|+|+ +. ++++++.|+.|++||+.++.. ...+.......++...+.++
T Consensus 168 v~~~~~~~~~~~-----~l~~~~~dg~v~iwd~~~~~~----------------------~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 168 VISLAWNQSLAH-----VFASAGSSNFASIWDLKAKKE----------------------VIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp CCEEEECSSCTT-----EEEEESSSSCEEEEETTTTEE----------------------EEEECCCCCSSCCCCCEEEE
T ss_pred eeEEEeCCCCCc-----EEEEEcCCCCEEEEECCCCCc----------------------ceEEeccccccccCCceEEE
Confidence 999999999 56 899999999999999987432 11111111122337789999
Q ss_pred EecCCC-CEEEEEEcCC---eEEEEECCCc-eeEEEEe-ecCceeEEEEEee-CCCEEEEEEccCCcEEEEEccCceEEE
Q 038577 271 DYHRGL-DMVVVGFSNG---VFGLYQMPDF-VCIHLLS-ISREKITTAVFNE-LGNWLVFGCAKLGQLLVWEWRSESYIL 343 (860)
Q Consensus 271 ~~~~~~-~~l~~~~~~g---~i~~~~~~~~-~~~~~~~-~~~~~i~~~~~s~-~~~~l~~~~~~~g~i~v~d~~~~~~~~ 343 (860)
+|+|++ .++++++.++ .|++||+.++ .....+. .|...+.+++|+| +++.+++++.+ |.|++||+.+++.+.
T Consensus 221 ~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-g~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 221 EWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-NTVLLWNPESAEQLS 299 (416)
T ss_dssp EECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-SEEEEECSSSCCEEE
T ss_pred EECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-CCEEEeeCCCCccce
Confidence 999997 6899999998 9999999886 5667777 7889999999999 88888888765 999999999999999
Q ss_pred EecCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEee----------------------------------
Q 038577 344 KQQGHYFDVNCLAYSPDS-QLLATGADDNKVKVWTVSSGFCFVTFT---------------------------------- 388 (860)
Q Consensus 344 ~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------------------------- 388 (860)
.+..|...|.+++|+|++ .++++++.||.|++|++.++.......
T Consensus 300 ~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 300 QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 999999999999999999 899999999999999998764322111
Q ss_pred -cCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc
Q 038577 389 -EHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY 423 (860)
Q Consensus 389 -~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~ 423 (860)
.|..++.+++|+|+|++|++++.|+.|++|++.+.
T Consensus 380 ~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp STTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 15678889999999999999999999999998653
No 44
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-38 Score=323.14 Aligned_cols=303 Identities=17% Similarity=0.291 Sum_probs=230.1
Q ss_pred CCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccC--eEEEEe--e-cCCceeEEEECCCCCEEEEE-eCC
Q 038577 41 KSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCH--VVLHRV--R-FKYPVNAILFSPNGKYIAVG-TGK 114 (860)
Q Consensus 41 ~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~--~~~~~~--~-~~~~v~~~~fspdg~~la~~-~~~ 114 (860)
+.+....+.+|...|.+++|+|+ +||+++.|+.|++||+.++ ..+..+ . |...|.+++|+|++++||++ .|+
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 34556667799999999999998 9999999999999999875 455555 2 88899999999999999999 789
Q ss_pred eEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEE
Q 038577 115 LVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVG 194 (860)
Q Consensus 115 ~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~ 194 (860)
.|++||+...........+...+.+|.+.|.+++|+|++++|++++.|++|++||+...... ......+.+|...|.+
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~--~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEE--YECISVLQEHSQDVKH 158 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCC--CEEEEEECCCSSCEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCC--eEEEEEeccCCCceEE
Confidence 99999986543221223457788999999999999999999999999999999999533011 1335667889999999
Q ss_pred EEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecC
Q 038577 195 CFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHR 274 (860)
Q Consensus 195 ~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 274 (860)
++|+|++. +|++++.|++|++|+...+.
T Consensus 159 v~~~p~~~-----~l~s~s~D~~i~iW~~~~~~----------------------------------------------- 186 (330)
T 2hes_X 159 VIWHPSEA-----LLASSSYDDTVRIWKDYDDD----------------------------------------------- 186 (330)
T ss_dssp EEECSSSS-----EEEEEETTSCEEEEEEETTE-----------------------------------------------
T ss_pred EEECCCCC-----EEEEEcCCCeEEEEECCCCC-----------------------------------------------
Confidence 99999988 89999999999999875420
Q ss_pred CCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeC--CCEEEEEEccCCcEEEEEccCc--------eEEEE
Q 038577 275 GLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNEL--GNWLVFGCAKLGQLLVWEWRSE--------SYILK 344 (860)
Q Consensus 275 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~~~g~i~v~d~~~~--------~~~~~ 344 (860)
.+++..+..|...|.+++|+|+ +..+++++.+ +.|++||+..+ .....
T Consensus 187 ---------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-~~v~iw~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 187 ---------------------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-STVRVWKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp ---------------------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-SCEEEEEEEEECTTSCEEEEEEEE
T ss_pred ---------------------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-CeEEEEEecCCCccccceeEEeee
Confidence 1233444556667777777777 4556666554 99999998764 33444
Q ss_pred ecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--eEE-EeecCCC-ceEEEEEee--CCCEEEEEeCCCcEEE
Q 038577 345 QQG-HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF--CFV-TFTEHTN-AVTALHFMA--NNHSLLSASLDGTVRA 417 (860)
Q Consensus 345 ~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~-~~~~~~~-~v~~i~~~~--~~~~l~s~~~dg~i~~ 417 (860)
+.. |...|.+++|++++ .|++++.||.|++|+..++. ... ....|.. .|.+++|+| ++++|++++.||.|++
T Consensus 245 ~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~ 323 (330)
T 2hes_X 245 LPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNF 323 (330)
T ss_dssp CCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEE
T ss_pred cccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEE
Confidence 444 88999999999765 89999999999999998774 333 3356877 899999999 6889999999999999
Q ss_pred EEccc
Q 038577 418 WDLFR 422 (860)
Q Consensus 418 wd~~~ 422 (860)
|++.+
T Consensus 324 W~~~~ 328 (330)
T 2hes_X 324 WSLEK 328 (330)
T ss_dssp EEC--
T ss_pred EEecc
Confidence 99854
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.5e-37 Score=324.49 Aligned_cols=327 Identities=16% Similarity=0.200 Sum_probs=284.0
Q ss_pred cCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEE
Q 038577 140 CNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMF 219 (860)
Q Consensus 140 h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~ 219 (860)
|.+.|.+++|+|||++++++..++.+..|..... .......+|...|.+++|+|+++ ++++++ ||.++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~-----~l~~~~-dg~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH------ARQINTLNHGEVVCAVTISNPTR-----HVYTGG-KGCVK 75 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE------EEEEEEECCSSCCCEEEECSSSS-----EEEEEC-BSEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc------cccceeccCCCceEEEEEecCCc-----EEEEcC-CCeEE
Confidence 4567899999999999999888877777765544 34555668999999999999999 999998 99999
Q ss_pred EeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce--
Q 038577 220 SWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV-- 297 (860)
Q Consensus 220 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~-- 297 (860)
+|++.++.... . ........+...+.+++|+|+++++++++.+|.|++|++.+++
T Consensus 76 iw~~~~~~~~~--------------------~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 132 (337)
T 1gxr_A 76 VWDISHPGNKS--------------------P---VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR 132 (337)
T ss_dssp EEETTSTTCCS--------------------C---SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E
T ss_pred EEECCCCCcee--------------------e---eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc
Confidence 99998753200 0 0111123577899999999999999999999999999998877
Q ss_pred eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 038577 298 CIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWT 377 (860)
Q Consensus 298 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 377 (860)
....+..+...+.+++|+|+++.+++++.+ |.+++||+++++....+..|...+.+++|+|+++.+++++.||.|++||
T Consensus 133 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 133 IKAELTSSAPACYALAISPDSKVCFSCCSD-GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETT-SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeeecccCCCceEEEEECCCCCEEEEEeCC-CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence 566777888899999999999999988776 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCC
Q 038577 378 VSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSF 457 (860)
Q Consensus 378 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (860)
+.+++.+..+. +...+.+++|+|+++.+++++.|+.+++||+.+.+... ...+...+.+++++|+++++++++.++
T Consensus 212 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg- 287 (337)
T 1gxr_A 212 LREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ--LHLHESCVLSLKFAYCGKWFVSTGKDN- 287 (337)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred CCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE--EcCCccceeEEEECCCCCEEEEecCCC-
Confidence 99998888774 78899999999999999999999999999998876543 234556899999999999999999998
Q ss_pred eEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 038577 458 EIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVF 507 (860)
Q Consensus 458 ~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 507 (860)
.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|++.
T Consensus 288 ~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 288 LLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred cEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9999999999888554 488999999999999999999999999999973
No 46
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.5e-38 Score=333.02 Aligned_cols=289 Identities=18% Similarity=0.305 Sum_probs=249.8
Q ss_pred EEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccC------------------CCeEEEE
Q 038577 87 LHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCN------------------DKVTALN 148 (860)
Q Consensus 87 ~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~------------------~~v~~l~ 148 (860)
...+.|...|.+++|+|||++||++.++.+++|++.+++. +..+..|. ..|.+++
T Consensus 58 ~~~~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 130 (393)
T 1erj_A 58 HKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSL-------VARLSDDSAANKDPENLNTSSSPSSDLYIRSVC 130 (393)
T ss_dssp EEEEECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCE-------EEEECC-----------------CCCCBEEEEE
T ss_pred EEecCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCE-------EEEecCccccccccccccccccCCCceeEEEEE
Confidence 3445699999999999999999999899999999998863 44444443 2499999
Q ss_pred EcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCC
Q 038577 149 WSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDG 228 (860)
Q Consensus 149 ~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~ 228 (860)
|+|||++|++++.|+.|++||+.++ .....+.+|...|.+++|+|++. +|++++.|++|++||+.++..
T Consensus 131 ~s~dg~~l~s~~~d~~i~iwd~~~~------~~~~~~~~h~~~v~~~~~~p~~~-----~l~s~s~d~~v~iwd~~~~~~ 199 (393)
T 1erj_A 131 FSPDGKFLATGAEDRLIRIWDIENR------KIVMILQGHEQDIYSLDYFPSGD-----KLVSGSGDRTVRIWDLRTGQC 199 (393)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSS-----EEEEEETTSEEEEEETTTTEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCC------cEEEEEccCCCCEEEEEEcCCCC-----EEEEecCCCcEEEEECCCCee
Confidence 9999999999999999999999987 66788999999999999999999 999999999999999987432
Q ss_pred CCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecC-CCCEEEEEEcCCeEEEEECCCceeEEEE-----
Q 038577 229 KIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHR-GLDMVVVGFSNGVFGLYQMPDFVCIHLL----- 302 (860)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~~~~~----- 302 (860)
.. . ..+...+.+++++| +++++++|+.||.|++||+.++..+..+
T Consensus 200 ----------------------~~------~-~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~ 250 (393)
T 1erj_A 200 ----------------------SL------T-LSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE 250 (393)
T ss_dssp ----------------------EE------E-EECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC----
T ss_pred ----------------------EE------E-EEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccccc
Confidence 00 1 12345799999999 8999999999999999999998887766
Q ss_pred --eecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc------------eEEEEecCcccCeEEEEEcCCCCEEEEEe
Q 038577 303 --SISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE------------SYILKQQGHYFDVNCLAYSPDSQLLATGA 368 (860)
Q Consensus 303 --~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 368 (860)
..|...|.+++|+|+|+.+++++.+ +.|++||+.+. .....+.+|...|.+++|+|++.+|++|+
T Consensus 251 ~~~~h~~~v~~v~~~~~g~~l~s~s~d-~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 251 SGTGHKDSVYSVVFTRDGQSVVSGSLD-RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp --CCCSSCEEEEEECTTSSEEEEEETT-SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred CCCCCCCCEEEEEECCCCCEEEEEeCC-CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 4677899999999999999988766 99999998753 34456678999999999999999999999
Q ss_pred CCCcEEEEECCCCeeEEEeecCCCceEEEEEee------CCCEEEEEeCCCcEEEEEcccc
Q 038577 369 DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA------NNHSLLSASLDGTVRAWDLFRY 423 (860)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~------~~~~l~s~~~dg~i~~wd~~~~ 423 (860)
.|+.|++||..+++.+..+.+|...|.+++|++ +++.|++++.||.|++|++.+.
T Consensus 330 ~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 330 KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 999999999999999999999999999999986 6789999999999999998543
No 47
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-37 Score=320.68 Aligned_cols=293 Identities=20% Similarity=0.304 Sum_probs=235.4
Q ss_pred CceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc--eEEEEe-cC-cccCeEEEEEcCCCCEEEEEeCC
Q 038577 295 DFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE--SYILKQ-QG-HYFDVNCLAYSPDSQLLATGADD 370 (860)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~--~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~~d 370 (860)
+.+.+..+..|...|.+++|+++ .+++++. |+.|++||+..+ .....+ .+ |...|.+++|+|++++|++|+.|
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~-D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 79 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGST-DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD 79 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEES-SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcC-CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC
Confidence 45677888999999999999987 6666655 499999999875 444445 44 99999999999999999999999
Q ss_pred CcEEEEECCC-------CeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc----ceeeEeeCCCCCcEEE
Q 038577 371 NKVKVWTVSS-------GFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY----RNFRTFTTPSSRQFVS 439 (860)
Q Consensus 371 g~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~----~~~~~~~~~~~~~~~~ 439 (860)
+.|++||+.. ...+..+.+|...|.+++|+|++++|++++.|+.|++||+... +....+ ..+...+.+
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~-~~h~~~v~~ 158 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVL-QEHSQDVKH 158 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEE-CCCSSCEEE
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEe-ccCCCceEE
Confidence 9999999853 4567788899999999999999999999999999999999532 233333 345668999
Q ss_pred EEECCCCCEEEEEecCCCeEEEEECCCC--ceEEEecCcccCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCc-----
Q 038577 440 LASDQSGEVICAGTLDSFEIFVWSMKTG--RLLDILSGHEGPVHGLVFSPT--NATLASSSWDKTVRLWNVFEGK----- 510 (860)
Q Consensus 440 ~~~~~~~~~l~~~~~~~~~i~v~d~~~~--~~~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~----- 510 (860)
++|+|++.+|++++.|+ .|++||..++ +.+..+.+|.+.|.+++|+|+ +.+|++++.|++|++||+..+.
T Consensus 159 v~~~p~~~~l~s~s~D~-~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 159 VIWHPSEALLASSSYDD-TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEECSSSSEEEEEETTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEECCCCCEEEEEcCCC-eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 99999999999999999 9999998876 678889999999999999998 7789999999999999987642
Q ss_pred ---ceeEEcc-cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc--eeEEE-ecccccCCCccccccccccccCCCCc
Q 038577 511 ---GSVESFP-HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGE--LMYTI-EGRRDISGGRLMTDRRSAANSSSGKC 583 (860)
Q Consensus 511 ---~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (860)
....+.. |...|.+++|++++ +|++++.||.|++||..+++ ..... .+|.. ..
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~-------------------~~ 297 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGV-------------------YE 297 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTT-------------------SC
T ss_pred eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccccc-------------------ce
Confidence 1222223 88999999999665 89999999999999988774 22222 33331 15
Q ss_pred EEEEEEec--CCCEEEEecCCCeEEEEECCC
Q 038577 584 FTTLCYSA--DGSYILAGGSSKYICMYDVAD 612 (860)
Q Consensus 584 i~~l~~s~--~g~~l~~~~~dg~v~vwd~~~ 612 (860)
|.+++|+| ++++|++++.||.|++||+++
T Consensus 298 v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 298 INVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99999999 799999999999999999865
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-37 Score=336.42 Aligned_cols=331 Identities=18% Similarity=0.217 Sum_probs=276.5
Q ss_pred eEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec
Q 038577 267 VTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ 346 (860)
Q Consensus 267 v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~ 346 (860)
+++++|+|+++++++++.||.+++|+..+++....+..+ ..+....|+++++.+++++.+ |.|++||+.++.....+.
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTE-GDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETT-SCEEEECTTSCEEEEETT
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECC-CCEEEEeCCCcceeeecc
Confidence 457899999999999999999999999887766555544 455566789999999988776 999999999999888888
Q ss_pred CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccccee
Q 038577 347 GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNF 426 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~ 426 (860)
+|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++.|++++.|+.|++||+.+++..
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred eEeeCC--CCCcE---------------------EEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec-CcccCeEE
Q 038577 427 RTFTTP--SSRQF---------------------VSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS-GHEGPVHG 482 (860)
Q Consensus 427 ~~~~~~--~~~~~---------------------~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~ 482 (860)
..+... ....+ .+++|+|+++++++++.++ .|++||+++++....+. +|...|.+
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG-VITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS-CEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC-eEEEEECCCCceeEEcccccCCCcee
Confidence 877643 22233 3445579999999999998 99999999998877664 58899999
Q ss_pred EEEcCCCC-EEEEEeCCCcEEEEEccCCcc-eeEEcc-cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEec
Q 038577 483 LVFSPTNA-TLASSSWDKTVRLWNVFEGKG-SVESFP-HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEG 559 (860)
Q Consensus 483 l~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 559 (860)
++|+|+++ +|++++.||.|++||+.+++. ...+.. |...+.++ +++++++|++++.||.|++|++.+......+..
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~ 374 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIE 374 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEEC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCcccee
Confidence 99999999 999999999999999998764 444444 66777777 456889999999999999999887432221111
Q ss_pred ccccCCCccccccccccccCCCCcEEEEEEecCCC---EEEEecCCCeEEEEECCC
Q 038577 560 RRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGS---YILAGGSSKYICMYDVAD 612 (860)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~---~l~~~~~dg~v~vwd~~~ 612 (860)
... ......+...|.+++|+|+++ .|++++.+|.+.+|++++
T Consensus 375 ~~~-----------~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 375 FET-----------PTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTS-----------CEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccC-----------ccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 000 001122334699999999999 888888999999999875
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.9e-37 Score=320.43 Aligned_cols=306 Identities=19% Similarity=0.307 Sum_probs=259.8
Q ss_pred CCceeEEEEeecCceeEEEEEeeCC-CEEEEEEccCCcEEEEEccCc-----eEEEEecCcccCeEEEEEcCCCCEEEEE
Q 038577 294 PDFVCIHLLSISREKITTAVFNELG-NWLVFGCAKLGQLLVWEWRSE-----SYILKQQGHYFDVNCLAYSPDSQLLATG 367 (860)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~~~g~i~v~d~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 367 (860)
+..+...++++|.+.|++++|+|++ ++|++++. |+.|++||+.+. .....+.+|...|.+++|+|++++|+++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~-D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASR-DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEET-TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcC-CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 3445567899999999999999985 66766665 499999998754 3566778999999999999999999999
Q ss_pred eCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCC-
Q 038577 368 ADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSG- 446 (860)
Q Consensus 368 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 446 (860)
+.|+.|++|+............+...+....+++++..+++++.|+.+++||+............+...+..+++++++
T Consensus 105 ~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 184 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSS 184 (340)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSS
T ss_pred cccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCC
Confidence 9999999999999999999989999999999999999999999999999999987766666666667788899998765
Q ss_pred -CEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEE
Q 038577 447 -EVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTV 525 (860)
Q Consensus 447 -~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 525 (860)
.++++++.|+ .|++||+++++.+..+.+|.++|++++|+|++++|++++.||.|++||+.+.+.... ..+...+.++
T Consensus 185 ~~~~~s~~~d~-~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~-~~~~~~v~~~ 262 (340)
T 4aow_A 185 NPIIVSCGWDK-LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDIINAL 262 (340)
T ss_dssp SCEEEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE-EECSSCEEEE
T ss_pred CcEEEEEcCCC-EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee-ecCCceEEee
Confidence 5677888888 999999999999999999999999999999999999999999999999998875544 4456789999
Q ss_pred EEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeE
Q 038577 526 VYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYI 605 (860)
Q Consensus 526 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v 605 (860)
+|+|++.++ +++.|+.|++||++++..+..+..+... .....+...|++++|+|||++|++|+.||.|
T Consensus 263 ~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~-----------~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 263 CFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVIS-----------TSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp EECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC------------------CCCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred ecCCCCcee-eccCCCEEEEEECCCCeEEEecccccee-----------eeccCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 999988755 4556999999999999888877654321 1122345679999999999999999999999
Q ss_pred EEEECCCce
Q 038577 606 CMYDVADQV 614 (860)
Q Consensus 606 ~vwd~~~~~ 614 (860)
++||+++|.
T Consensus 331 ~iW~~~tGt 339 (340)
T 4aow_A 331 RVWQVTIGT 339 (340)
T ss_dssp EEEEEEC--
T ss_pred EEEeCCCcC
Confidence 999999985
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.6e-38 Score=338.70 Aligned_cols=344 Identities=13% Similarity=0.120 Sum_probs=292.4
Q ss_pred CeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEee
Q 038577 143 KVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWG 222 (860)
Q Consensus 143 ~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~ 222 (860)
.+++++|+|++++|++++.|+.|++||+.+. .....+..| ..+....|++++. +|++++.||.|++||
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~------~~~~~~~~~-~~~~~~~~~~~~~-----~l~~~~~dg~i~iwd 125 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIR------DGSKMLKRA-DYTAVDTAKLQMR-----RFILGTTEGDIKVLD 125 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSE------ETTTTSCSC-CEEEEEEECSSSC-----EEEEEETTSCEEEEC
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccc------ceeeEEecC-CceEEEEEecCCC-----EEEEEECCCCEEEEe
Confidence 3457999999999999999999999999887 334444555 4455567899999 999999999999999
Q ss_pred ecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEE
Q 038577 223 FSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLL 302 (860)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~ 302 (860)
+.++.. ...+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+
T Consensus 126 ~~~~~~----------------------------~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 126 SNFNLQ----------------------------REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp TTSCEE----------------------------EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CCCcce----------------------------eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 876421 2345678899999999999999999999999999999999999999
Q ss_pred eecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecC---cccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 038577 303 SISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQG---HYFDVNCLAYSPDSQLLATGADDNKVKVWTVS 379 (860)
Q Consensus 303 ~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 379 (860)
..|...|.+++|+|+++.+++++.+ |.|++||+++++.+..+.. |...+.++++.|++...
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d-~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--------------- 241 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLD-GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ--------------- 241 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETT-SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS---------------
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCC-CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcce---------------
Confidence 9999999999999999999988776 9999999999999888864 66778888887654322
Q ss_pred CCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCC-EEEEEecCCCe
Q 038577 380 SGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGE-VICAGTLDSFE 458 (860)
Q Consensus 380 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~ 458 (860)
....+...+.+++|+|+++++++++.||.|++||+.+++....+...+...+.+++++|++. ++++++.++ .
T Consensus 242 ------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-~ 314 (420)
T 3vl1_A 242 ------LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-M 314 (420)
T ss_dssp ------CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-E
T ss_pred ------eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-e
Confidence 12346778899999999999999999999999999999988888877788999999999999 999999998 9
Q ss_pred EEEEECCCCce-EEEecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc---------ceeEEcccCCCeEEEEE
Q 038577 459 IFVWSMKTGRL-LDILSG-HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGK---------GSVESFPHTHDVLTVVY 527 (860)
Q Consensus 459 i~v~d~~~~~~-~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~ 527 (860)
|++||+++++. +..+.+ |...|.++.+ +++++|++++.||.|++||+.... .......+...+.+++|
T Consensus 315 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 393 (420)
T 3vl1_A 315 LAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCY 393 (420)
T ss_dssp EEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEE
T ss_pred EEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEE
Confidence 99999998754 666766 6778888855 578899999999999999997742 23345578889999999
Q ss_pred eeCCC---EEEEEeCCCeEEEEeCCC
Q 038577 528 RPDGR---QLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 528 s~~~~---~l~~~~~dg~i~iwd~~~ 550 (860)
+|+++ .+++++.+|.+.+|++.+
T Consensus 394 s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 394 VSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCCCcceEEEEcCCceEEEEeccC
Confidence 99999 788888899999999864
No 51
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.5e-36 Score=316.36 Aligned_cols=297 Identities=16% Similarity=0.230 Sum_probs=249.4
Q ss_pred cceEeecCCCcEEEEEE-----cc-CCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEe
Q 038577 181 KPFLLLGHRDSVVGCFF-----SV-DKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGL 254 (860)
Q Consensus 181 ~~~~~~~h~~~i~~~~~-----~~-~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (860)
....+.+|.+.|.+++| ++ ++. +|++++.|++|++|++....... .. .
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~-----~l~sgs~D~~v~iWd~~~~~~~~--------------------~~-~ 66 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSP-----VLISGSRDKTVMIWKLYEEEQNG--------------------YF-G 66 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCC-----EEEEEETTSCEEEEEECSSCCSS--------------------BS-E
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCC-----EEEEEcCCCEEEEEECCcCCccc--------------------cc-c
Confidence 45678999999999999 66 777 99999999999999997643200 00 0
Q ss_pred eeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEE
Q 038577 255 LRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVW 334 (860)
Q Consensus 255 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~ 334 (860)
.....+.+|...|.+++|+|++.++++++.||.|++||+.+++.+..+..|...|.+++|+|+++.+++++.+ +.|++|
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d-~~i~~w 145 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE-REIKLW 145 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT-SCEEEE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC-CEEEEE
Confidence 1234466888999999999999999999999999999999999999999999999999999999999988776 999999
Q ss_pred EccCceEEEEe--cCcccCeEEEEEcCCC----------CEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeC
Q 038577 335 EWRSESYILKQ--QGHYFDVNCLAYSPDS----------QLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMAN 402 (860)
Q Consensus 335 d~~~~~~~~~~--~~~~~~v~~~~~s~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~ 402 (860)
|+......... ..|...|.+++|+|++ .++++++.||.|++|| ........+.+|...|.+++|+|+
T Consensus 146 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 146 NILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp ESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTT
T ss_pred eccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCC
Confidence 99854333222 2688899999999987 7999999999999999 456777888999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEcccc-ceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEE--Eec-----
Q 038577 403 NHSLLSASLDGTVRAWDLFRY-RNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLD--ILS----- 474 (860)
Q Consensus 403 ~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~--~~~----- 474 (860)
+++|++++.||.|++||+.+. .....+.. ...+.+++|+|++.+++++. ++ .+++||+.+++... .+.
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~--~~~v~~v~~sp~~~~la~~~-d~-~v~iw~~~~~~~~~~~~~~~~~~~ 300 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFDA--GSTINQIAFNPKLQWVAVGT-DQ-GVKIFNLMTQSKAPVCTIEAEPIT 300 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEEC--SSCEEEEEECSSSCEEEEEE-SS-CEEEEESSSCCSCSEEECCCCSGG
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeecC--CCcEEEEEECCCCCEEEEEC-CC-CEEEEEeCCCCCCceEEeecCcch
Confidence 999999999999999999543 33333332 34689999999999887665 55 69999998876543 433
Q ss_pred ------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q 038577 475 ------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 475 ------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 509 (860)
+|...|.+++|+|+|++|++|+.||.|++|++.++
T Consensus 301 ~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 301 KAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred hhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 68889999999999999999999999999998764
No 52
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-36 Score=318.58 Aligned_cols=297 Identities=19% Similarity=0.229 Sum_probs=267.3
Q ss_pred eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 038577 297 VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVW 376 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 376 (860)
.....+..|...|.+++|+|+++++++++.+ |.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKD-SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESS-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCC-CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 4456678899999999999999999988766 999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCC-----CcEEEEEccccceeeEee-----------C-CCCCcEEE
Q 038577 377 TVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLD-----GTVRAWDLFRYRNFRTFT-----------T-PSSRQFVS 439 (860)
Q Consensus 377 d~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~-----------~-~~~~~~~~ 439 (860)
|+.+++.+..+. +...+.+++|+|+++++++++.+ +.+++||+........+. . .....+.+
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999998887 88999999999999999999999 999999998764322221 1 11227899
Q ss_pred EEECCCCCEEEEEecCCCeEEEEECCC-CceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEccc
Q 038577 440 LASDQSGEVICAGTLDSFEIFVWSMKT-GRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPH 518 (860)
Q Consensus 440 ~~~~~~~~~l~~~~~~~~~i~v~d~~~-~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 518 (860)
++++|+++++++++.++ .|++||+++ ++.+..+..|...|.+++|+|++++|++++.||.|++||+.+++....+ .+
T Consensus 181 ~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~-~~ 258 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDG-KISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY-ET 258 (369)
T ss_dssp EEECGGGCEEEEEETTS-EEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-EC
T ss_pred EEEcCCCCEEEEEcCCC-EEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee-cC
Confidence 99999999999999998 999999998 7888999999999999999999999999999999999999998754444 48
Q ss_pred CCCeEEEEEeeCCCEEEEEeCCC--------------eEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcE
Q 038577 519 THDVLTVVYRPDGRQLACSTLDG--------------QIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCF 584 (860)
Q Consensus 519 ~~~v~~~~~s~~~~~l~~~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 584 (860)
...+..++|+|+++++++++.++ .+++||..+++.+..+.+|.. .|
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------------~v 318 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG--------------------PL 318 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS--------------------CE
T ss_pred CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC--------------------cE
Confidence 88999999999999999999988 899999999999999988875 59
Q ss_pred EEEEEecCCCEEEEecCCCeEEEEECCCceEEE
Q 038577 585 TTLCYSADGSYILAGGSSKYICMYDVADQVLLR 617 (860)
Q Consensus 585 ~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~ 617 (860)
++++|+|+|++|++++.||.|++|+++++....
T Consensus 319 ~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 319 NTVAISPQGTSYASGGEDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEECHHHHTC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECccccchh
Confidence 999999999999999999999999999876443
No 53
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-35 Score=321.41 Aligned_cols=325 Identities=20% Similarity=0.370 Sum_probs=284.6
Q ss_pred ccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc
Q 038577 258 DDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 258 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~ 337 (860)
..+.+|...+.. ++.++++++++|+.||.|++||+.+++.+..+..|...|.+++|+ ++.+++++.+ |.|++||+.
T Consensus 112 ~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~d-g~i~vwd~~ 187 (445)
T 2ovr_B 112 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTD-RTLKVWNAE 187 (445)
T ss_dssp EEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETT-SCEEEEETT
T ss_pred EEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCC-CeEEEEECC
Confidence 345667766533 355578999999999999999999999999999999999999997 5677777665 999999999
Q ss_pred CceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEE
Q 038577 338 SESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRA 417 (860)
Q Consensus 338 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~ 417 (860)
+++.+..+.+|...|.+++++ ++.+++|+.||.|++||+.+++.+..+.+|...|.++.+ ++..+++++.||.|++
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEE
T ss_pred cCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEE
Confidence 999999999999999999996 568999999999999999999999999999999999998 6789999999999999
Q ss_pred EEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC
Q 038577 418 WDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW 497 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~ 497 (860)
||+.+++....+.. +...+.++.+ ++.++++++.|+ .|++||+++++.+..+.+|...+.++.+ +++++++++.
T Consensus 264 wd~~~~~~~~~~~~-~~~~v~~~~~--~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~ 337 (445)
T 2ovr_B 264 WDPETETCLHTLQG-HTNRVYSLQF--DGIHVVSGSLDT-SIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNA 337 (445)
T ss_dssp EEGGGTEEEEEECC-CSSCEEEEEE--CSSEEEEEETTS-CEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEET
T ss_pred EECCCCcEeEEecC-CCCceEEEEE--CCCEEEEEeCCC-eEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeC
Confidence 99999988887764 4457888888 889999999998 9999999999999999999999998887 4679999999
Q ss_pred CCcEEEEEccCCcceeEEcc---cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCcccccccc
Q 038577 498 DKTVRLWNVFEGKGSVESFP---HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRS 574 (860)
Q Consensus 498 dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (860)
||.|++||+.+++....+.. |...|++++|+ +++|++++.||.|++||+.+++.+..+.....
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------------ 403 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLES------------ 403 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTT------------
T ss_pred CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeecccc------------
Confidence 99999999999887777665 88899999995 68999999999999999999999888842110
Q ss_pred ccccCCCCcEEEEEEecCCCEEEEecCCCe----EEEEECCCc
Q 038577 575 AANSSSGKCFTTLCYSADGSYILAGGSSKY----ICMYDVADQ 613 (860)
Q Consensus 575 ~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~----v~vwd~~~~ 613 (860)
..+...|.+++|+|+|.+|++++.||+ |.+||+...
T Consensus 404 ---~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 404 ---GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp ---GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred ---CCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 011246999999999999999999997 999998753
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-38 Score=342.25 Aligned_cols=371 Identities=12% Similarity=0.078 Sum_probs=258.2
Q ss_pred cCeEEEEeecCCceeEEEECCCC---------CEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCC
Q 038577 83 CHVVLHRVRFKYPVNAILFSPNG---------KYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDS 153 (860)
Q Consensus 83 ~~~~~~~~~~~~~v~~~~fspdg---------~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~ 153 (860)
+++....+.+.+.|.+|+|+|++ ++||++..... .. ..+|++
T Consensus 123 ~~r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~-------~~----------------------~~~~~~ 173 (524)
T 2j04_B 123 GKRRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYM-------DE----------------------PLNEHL 173 (524)
T ss_dssp CCSCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC---------------------------------------
T ss_pred CCcceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEeccc-------CC----------------------ccchhh
Confidence 34444556678999999999987 79998832210 00 136899
Q ss_pred CeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCC-CccceEEEEcCCccEEEeeecCCCCCCcc
Q 038577 154 NYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKT-DKVNRIYTIARDCYMFSWGFSGNDGKIDE 232 (860)
Q Consensus 154 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~-~~~~~l~s~~~dg~i~~w~~~~~~~~~~~ 232 (860)
+.+++++.|++|+||++.++ +. .......+.+|.+.|.+++|+|++.. ....+|++++.||+|++|++..+......
T Consensus 174 ~~laS~s~D~tI~iWd~~~~-~~-~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~ 251 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTS-TL-HCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV 251 (524)
T ss_dssp --------CEEEEEEEEETT-TC-CEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE
T ss_pred hhhccCCCCceEEEEEccCC-CC-CceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc
Confidence 99999999999999999876 21 00112456788899999999997210 00128999999999999999765321000
Q ss_pred ccCCCCCCCCCCCcceeeeEEe-eeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce-eEEEEeecCceeE
Q 038577 233 TMEDSEPPSPGTPERRVKKWGL-LRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV-CIHLLSISREKIT 310 (860)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~-~~~~~~~~~~~i~ 310 (860)
.... .....+.+|...|.+++|+|+ ..|++|+.||.|++||+.++. ....+..|...|.
T Consensus 252 ------------------~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~ 312 (524)
T 2j04_B 252 ------------------FKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL 312 (524)
T ss_dssp ------------------EECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE
T ss_pred ------------------ceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEE
Confidence 0000 011235567889999999986 489999999999999998764 4566888999999
Q ss_pred EE--EEeeCC-CEEEEEEccCCcEEEEEccCceEEEEecCccc--CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 038577 311 TA--VFNELG-NWLVFGCAKLGQLLVWEWRSESYILKQQGHYF--DVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFV 385 (860)
Q Consensus 311 ~~--~~s~~~-~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 385 (860)
++ +|+++| ..+++++.+ ++|++||+++++....+.+|.. .|.+++|+|+++.+++++.|++|++||++++.++.
T Consensus 313 sv~~~~s~~g~~~laS~S~D-~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~ 391 (524)
T 2j04_B 313 SVSTAYSDFEDTVVSTVAVD-GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH 391 (524)
T ss_dssp EEEEECCTTSCCEEEEEETT-SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE
T ss_pred EEEEEcCCCCCeEEEEeccC-CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccce
Confidence 99 567887 666666655 9999999998876655656643 58899999999999999999999999999999888
Q ss_pred EeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee----CCCCCcEEEEEECCCCCEEEEEecCCCeEEE
Q 038577 386 TFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT----TPSSRQFVSLASDQSGEVICAGTLDSFEIFV 461 (860)
Q Consensus 386 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v 461 (860)
.+.+|.+.|++++|+|+++.|++|+.||+|++||+... ...... ......+..++++|++..+.. .++ ..+
T Consensus 392 ~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~--~~~--~~~ 466 (524)
T 2j04_B 392 PLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI--DSS--YEV 466 (524)
T ss_dssp EEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEEE--CCC--CCC
T ss_pred eeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEEc--cCC--cee
Confidence 89999999999999999999999999999999998653 222211 111224678999999986532 232 333
Q ss_pred EECC-CCceEEEecCcccCeEEEEEcCCCC---EEEEEeCCCcEEEEEccCC
Q 038577 462 WSMK-TGRLLDILSGHEGPVHGLVFSPTNA---TLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 462 ~d~~-~~~~~~~~~~h~~~v~~l~~s~~~~---~l~s~~~dg~i~iwd~~~~ 509 (860)
|+.. ++..+..+.+|..+|.+++|+|++. ++|+|+.||.|+||++...
T Consensus 467 ~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 467 YPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred cccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 4332 4677888999999999999999964 9999999999999998643
No 55
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3e-35 Score=307.52 Aligned_cols=298 Identities=20% Similarity=0.283 Sum_probs=242.2
Q ss_pred EEEEEeeccCCCeEEEEEcCC-CCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEE
Q 038577 132 ELIRTLADCNDKVTALNWSPD-SNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIY 210 (860)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~s~d-~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~ 210 (860)
.+..+|.||.+.|++++|+|+ +++|++|+.|++|++||+... +.........+.+|...|.+++|+|+++ +|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~-~~~~~~~~~~l~~h~~~V~~~~~s~dg~-----~l~ 102 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRD-ETNYGIPQRALRGHSHFVSDVVISSDGQ-----FAL 102 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCS-SSCSEEEEEEECCCSSCEEEEEECTTSS-----EEE
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC-CcccceeeEEEeCCCCCEEEEEECCCCC-----EEE
Confidence 356789999999999999998 589999999999999999876 2211223445666666666666666666 666
Q ss_pred EEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEE
Q 038577 211 TIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGL 290 (860)
Q Consensus 211 s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~ 290 (860)
+++.|+.+++|+..
T Consensus 103 s~~~d~~i~~~~~~------------------------------------------------------------------ 116 (340)
T 4aow_A 103 SGSWDGTLRLWDLT------------------------------------------------------------------ 116 (340)
T ss_dssp EEETTSEEEEEETT------------------------------------------------------------------
T ss_pred EEcccccceEEeec------------------------------------------------------------------
Confidence 66666666665544
Q ss_pred EECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEE-EecCcccCeEEEEEcCCC--CEEEEE
Q 038577 291 YQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYIL-KQQGHYFDVNCLAYSPDS--QLLATG 367 (860)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~-~~~~~~~~v~~~~~s~~~--~~l~~~ 367 (860)
..........+...+....+++++..+++++.+ +.+++||........ ...+|...+.+++|++++ ..++++
T Consensus 117 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 117 ----TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp ----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred ----ccceeeeecCCCCceeEEEEeecCccceeecCC-CeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 334444444555677778888999999888766 999999998765443 346789999999998864 578899
Q ss_pred eCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCC
Q 038577 368 ADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGE 447 (860)
Q Consensus 368 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (860)
+.|+.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.||.|++||+.+.+.+..+... ..+.+++++|++.
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~ 269 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRY 269 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEEEECSSSS
T ss_pred cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEeeecCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999888877654 4789999999987
Q ss_pred EEEEEecCCCeEEEEECCCCceEEEec---------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q 038577 448 VICAGTLDSFEIFVWSMKTGRLLDILS---------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGK 510 (860)
Q Consensus 448 ~l~~~~~~~~~i~v~d~~~~~~~~~~~---------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 510 (860)
+++.+ .++ .|++||++++..+..+. +|...|++++|+|++++|++|+.||.|++||+.+|+
T Consensus 270 ~~~~~-~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 270 WLCAA-TGP-SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEE-ETT-EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eeecc-CCC-EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 76555 566 99999999887766553 688999999999999999999999999999999875
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.1e-36 Score=323.79 Aligned_cols=307 Identities=15% Similarity=0.178 Sum_probs=261.3
Q ss_pred eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce------EEEEecCcccCeEEEEEcCC----C---CEE
Q 038577 298 CIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES------YILKQQGHYFDVNCLAYSPD----S---QLL 364 (860)
Q Consensus 298 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~------~~~~~~~~~~~v~~~~~s~~----~---~~l 364 (860)
....+..|...|.+++|+| +.+++++.+ |.|++|++.++. ....+.+|...|.+++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGD-GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETT-SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCC-CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 3455678999999999998 677777665 999999999887 67788899999999999999 9 999
Q ss_pred EEEeCCCcEEEEECCCCee-----EEEeecC-----CCceEEEEEe----eCCCE-EEEEeCCCcEEEEEccc------c
Q 038577 365 ATGADDNKVKVWTVSSGFC-----FVTFTEH-----TNAVTALHFM----ANNHS-LLSASLDGTVRAWDLFR------Y 423 (860)
Q Consensus 365 ~~~~~dg~i~iwd~~~~~~-----~~~~~~~-----~~~v~~i~~~----~~~~~-l~s~~~dg~i~~wd~~~------~ 423 (860)
++++.||.|++|++.++.. ...+..| ...|.+++|+ |+++. |++++.||.|++||+.+ .
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 9999999999999998887 8888888 5999999999 99999 99999999999999998 6
Q ss_pred ceee-----Eee------CCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC---c---ccCeEEEEEc
Q 038577 424 RNFR-----TFT------TPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG---H---EGPVHGLVFS 486 (860)
Q Consensus 424 ~~~~-----~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~---h---~~~v~~l~~s 486 (860)
+... .+. ..+...+.+++++|++ ++++++.++ .|++||+++++.+..+.. | ...|.+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-EEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-cEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 6655 554 3456678999999999 999999888 999999999999999998 9 9999999999
Q ss_pred CCCCEEEEEeCC---CcEEEEEccCCcceeEEcc-------------cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 487 PTNATLASSSWD---KTVRLWNVFEGKGSVESFP-------------HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 487 ~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
|++++|++++.| |.|++||+.+++....+.. |...|.+++|+|++++|++++.||.|++||+.+
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999 9999999999987777777 999999999999999999999999999999999
Q ss_pred CceeEEEe------cccccCCCccccccccccccCCCCcEEEEEEecCC----------CEEEEecCCCeEEEEECCCce
Q 038577 551 GELMYTIE------GRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADG----------SYILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 551 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g----------~~l~~~~~dg~v~vwd~~~~~ 614 (860)
++.+..+. +|.... ..........+...|++++|+|+| ++|++++.||.|++|++.+|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDI-----LAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGC-----CCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CceeEEEecccCcccchhhh-----hccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 99999998 441000 000000111224579999999999 799999999999999998864
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-38 Score=339.47 Aligned_cols=314 Identities=9% Similarity=0.015 Sum_probs=234.8
Q ss_pred cCCCCEEEEEEcCCeEEEEECCCceeE----EEEeecCceeEEEEEeeC------CCEEEEEEccCCcEEEEEccCceE-
Q 038577 273 HRGLDMVVVGFSNGVFGLYQMPDFVCI----HLLSISREKITTAVFNEL------GNWLVFGCAKLGQLLVWEWRSESY- 341 (860)
Q Consensus 273 ~~~~~~l~~~~~~g~i~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~------~~~l~~~~~~~g~i~v~d~~~~~~- 341 (860)
+|+++.+++++.||.|++|++.+++.. ..+..+.+.|..++|+|+ +..|++++.+ |+|++||+.++..
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~D-gtvrlWd~~~~~~~ 248 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQE-GTINFLEIIDNATD 248 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETT-SCEEEEECCCCSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecC-CeEEEEEcCCCccc
Confidence 588899999999999999999776542 345667788999999997 4677777665 9999999976531
Q ss_pred ----------EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-eEEEeecCCCceEEE--EEeeCC-CEEE
Q 038577 342 ----------ILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF-CFVTFTEHTNAVTAL--HFMANN-HSLL 407 (860)
Q Consensus 342 ----------~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~i--~~~~~~-~~l~ 407 (860)
...+.+|...|++++|++++ .|++|+.||+|++||++++. ....+.+|...|.++ +|+|++ .+|+
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 23567899999999999864 89999999999999998763 455688999999999 567887 8999
Q ss_pred EEeCCCcEEEEEccccceeeEeeCCCC-CcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEc
Q 038577 408 SASLDGTVRAWDLFRYRNFRTFTTPSS-RQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFS 486 (860)
Q Consensus 408 s~~~dg~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s 486 (860)
+++.|++|++||+++++....+..... ..+.+++|+|++..+++++.++ .|++||++++..+..+.+|.+.|++++|+
T Consensus 328 S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~-tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS-SLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS-EEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred EeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC-cEEEEECcccccceeeecCCCceEEEEeC
Confidence 999999999999998877666553322 2467899999999999999888 99999999999888899999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCcceeEEc-----ccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC-CCceeEEEecc
Q 038577 487 PTNATLASSSWDKTVRLWNVFEGKGSVESF-----PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL-NGELMYTIEGR 560 (860)
Q Consensus 487 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~ 560 (860)
|++++|++|+.||+|++||+.... ..... .+...+.+++|+|++..+. ... .+.+|+.. ++..+..+.+|
T Consensus 407 p~g~~l~Sgs~Dgtv~lwd~~~~~-~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh 482 (524)
T 2j04_B 407 RLHPMVLAGSADGSLIITNAARRL-LHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAH 482 (524)
T ss_dssp SSCCBCEEEETTTEEECCBSCSST-TTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------C
T ss_pred CCCCeEEEEECCCEEEEEechHhh-ccccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCC
Confidence 999999999999999999986542 21111 1222477999999998553 222 23444443 56677777777
Q ss_pred cccCCCccccccccccccCCCCcEEEEEEecCCC---EEEEecCCCeEEEEECCCc
Q 038577 561 RDISGGRLMTDRRSAANSSSGKCFTTLCYSADGS---YILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~---~l~~~~~dg~v~vwd~~~~ 613 (860)
.. .|.+++|+|++. +|++|+.+|.|+||++.-.
T Consensus 483 ~~--------------------~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 483 GI--------------------NITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp CC--------------------SCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred Cc--------------------eEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 64 599999999964 9999999999999998653
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-37 Score=332.46 Aligned_cols=384 Identities=13% Similarity=0.194 Sum_probs=294.2
Q ss_pred EEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEe-eccCCCeEEEEEcC-CCCeEEEeecCCeEEEEeecccccC
Q 038577 99 ILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTL-ADCNDKVTALNWSP-DSNYLLVGSKDLAVRLFYVKEKLKG 176 (860)
Q Consensus 99 ~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~-d~~~l~s~~~dg~v~vwd~~~~~~~ 176 (860)
..|+|+++.++++. .|+..+ + ++..+ .+|.+.|++++|+| ++++|++|+.||.|++||+......
T Consensus 33 ~~f~~~~~~~~~~~-----~w~~~g-~-------~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~ 99 (437)
T 3gre_A 33 KEFGPIQEIVRSPN-----MGNLRG-K-------LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG 99 (437)
T ss_dssp GGGCCCCCCCCCCC-----GGGCCC-C-------EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT
T ss_pred hhcCCccccccccc-----cccccc-e-------EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC
Confidence 35788888887654 477443 3 46777 89999999999999 9999999999999999999873111
Q ss_pred cccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeec---CCCCCCccccCCCCCCCCCCCcceeeeEE
Q 038577 177 IHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFS---GNDGKIDETMEDSEPPSPGTPERRVKKWG 253 (860)
Q Consensus 177 ~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (860)
.. .......+|...|.+++|+|++. +|++++.||.|++||+. .+.. .......
T Consensus 100 ~~-~~~~~~~~h~~~v~~~~~~~~~~-----~l~s~s~dg~i~vwd~~~~~~~~~------------------~~~~~~~ 155 (437)
T 3gre_A 100 EV-YSSSLTYDCSSTVTQITMIPNFD-----AFAVSSKDGQIIVLKVNHYQQESE------------------VKFLNCE 155 (437)
T ss_dssp CC-CSCSEEEECSSCEEEEEECTTSS-----EEEEEETTSEEEEEEEEEEEETTE------------------EEEEEEE
T ss_pred cc-cceeeeccCCCCEEEEEEeCCCC-----EEEEEeCCCEEEEEEeccccCCce------------------eeccccc
Confidence 10 11122236999999999999998 99999999999999995 2211 0000111
Q ss_pred eeeeccccC--CCCceEEEE--ecCCCCEEEEEEcCCeEEEEECCCceeEEEEee--cCceeEEEEEeeCCCEEEEEEcc
Q 038577 254 LLRKDDFSQ--APSKVTACD--YHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSI--SREKITTAVFNELGNWLVFGCAK 327 (860)
Q Consensus 254 ~~~~~~~~~--~~~~v~~~~--~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~~ 327 (860)
......+.. +...+.++. +++++.++++++.||.|++||+.+++.+..+.. |...|.+++|+|+++.+++++.+
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 235 (437)
T 3gre_A 156 CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR 235 (437)
T ss_dssp EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT
T ss_pred eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC
Confidence 111222222 566788888 668999999999999999999999999999988 78899999999999999998876
Q ss_pred CCcEEEEEccCceEEEEec-CcccCeEEEEEcC----CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeC
Q 038577 328 LGQLLVWEWRSESYILKQQ-GHYFDVNCLAYSP----DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMAN 402 (860)
Q Consensus 328 ~g~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~ 402 (860)
|.|++||+++++.+..+. .|...|.+++|+| ++.++++|+.||.|++||+.+++.+..+.+|...+..+.|+|+
T Consensus 236 -g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (437)
T 3gre_A 236 -GIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPI 314 (437)
T ss_dssp -SCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCB
T ss_pred -CeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceeccc
Confidence 999999999999988875 7888999996654 6789999999999999999999999999999999999999998
Q ss_pred CCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcc---cC
Q 038577 403 NHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHE---GP 479 (860)
Q Consensus 403 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~---~~ 479 (860)
++.+ .+..+ ....+...+.+++++ +++++++++.|+ .|++||+.+++....+.+|. ..
T Consensus 315 ~~~l----~~~~~-------------~~~~~~~~v~~l~~~-~~~~l~s~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~ 375 (437)
T 3gre_A 315 EKGL----EELNF-------------CGIRSLNALSTISVS-NDKILLTDEATS-SIVMFSLNELSSSKAVISPSRFSDV 375 (437)
T ss_dssp CSSG----GGCCC-------------CCCCSGGGGCCEEEE-TTEEEEEEGGGT-EEEEEETTCGGGCEEEECC--CCCE
T ss_pred cccc----cccee-------------cccccCCceEEEEEC-CceEEEecCCCC-eEEEEECCCcccceEEecccccCce
Confidence 7655 11110 011245578899999 789999999999 99999999999999988864 34
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeC--CCEEEEEeCCCeEEEEe
Q 038577 480 VHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPD--GRQLACSTLDGQIHFWD 547 (860)
Q Consensus 480 v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd 547 (860)
+....++++..+++.. |+............|...|++++|+++ +.+|++|+.||.|++|+
T Consensus 376 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 376 FIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEEETTEEEEEEE--------CC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EEEEEeecceEEEEEe--------cccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 5556666665555444 222233333344569999999999998 78999999999999995
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.5e-35 Score=317.87 Aligned_cols=322 Identities=21% Similarity=0.336 Sum_probs=285.2
Q ss_pred EEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEc
Q 038577 134 IRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA 213 (860)
Q Consensus 134 ~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~ 213 (860)
...+.+|.+.+.. ++++++++|++|+.||.|++||+.++ .....+.+|.+.|.++.|+ +. .+++++
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~--~~-----~l~s~~ 176 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG------KCLRTLVGHTGGVWSSQMR--DN-----IIISGS 176 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC------CEEEECCCCSSCEEEEEEE--TT-----EEEEEE
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCC------cEEEEEcCCCCCEEEEEec--CC-----EEEEEe
Confidence 4678899887533 35557899999999999999999988 6678889999999999997 44 899999
Q ss_pred CCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEEC
Q 038577 214 RDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQM 293 (860)
Q Consensus 214 ~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~ 293 (860)
.||+|++||+.++.. ...+.+|...|.++.++ ++.+++|+.||.|++||+
T Consensus 177 ~dg~i~vwd~~~~~~----------------------------~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 177 TDRTLKVWNAETGEC----------------------------IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 226 (445)
T ss_dssp TTSCEEEEETTTTEE----------------------------EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEES
T ss_pred CCCeEEEEECCcCcE----------------------------EEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEEC
Confidence 999999999987522 23345788899999995 568999999999999999
Q ss_pred CCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcE
Q 038577 294 PDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKV 373 (860)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 373 (860)
.+++.+..+..+...+.++.+ +++.+++++.+ |.|++||+.+++.+..+.+|...|.+++| ++..+++++.||.|
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i 301 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSI 301 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT-SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCE
T ss_pred CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC-CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeE
Confidence 999999999999999999998 78888888765 99999999999999999999999999999 78899999999999
Q ss_pred EEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCC--CCCcEEEEEECCCCCEEEE
Q 038577 374 KVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTP--SSRQFVSLASDQSGEVICA 451 (860)
Q Consensus 374 ~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 451 (860)
++||+.+++.+..+.+|...+.++.++ ++++++++.||.|++||+.+++....+..+ +...+.+++++ ++++++
T Consensus 302 ~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s 377 (445)
T 2ovr_B 302 RVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVIT 377 (445)
T ss_dssp EEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEE
T ss_pred EEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEE
Confidence 999999999999999999999988874 569999999999999999999988888753 55678888885 689999
Q ss_pred EecCCCeEEEEECCCCceEEEe-----cCcccCeEEEEEcCCCCEEEEEeCCCc----EEEEEccCC
Q 038577 452 GTLDSFEIFVWSMKTGRLLDIL-----SGHEGPVHGLVFSPTNATLASSSWDKT----VRLWNVFEG 509 (860)
Q Consensus 452 ~~~~~~~i~v~d~~~~~~~~~~-----~~h~~~v~~l~~s~~~~~l~s~~~dg~----i~iwd~~~~ 509 (860)
++.|+ .|++||+.+++.+..+ .+|.+.|.+++|+|++.++++++.||+ |.+||+...
T Consensus 378 ~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 378 SSDDG-TVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EETTS-EEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred EeCCC-eEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99998 9999999999999888 578899999999999999999999998 999998754
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.6e-35 Score=339.96 Aligned_cols=310 Identities=20% Similarity=0.336 Sum_probs=253.3
Q ss_pred eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc-----eEEEEecCcccCeEEEEEcCCCCEEEEEeCCCc
Q 038577 298 CIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE-----SYILKQQGHYFDVNCLAYSPDSQLLATGADDNK 372 (860)
Q Consensus 298 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 372 (860)
....+..|.+.|++++|+|++..++++++.|+.|++|++.+. .....+.+|...|.+++|+|++++|++|+.||.
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 445688999999999999987544444455599999998753 455677899999999999999999999999999
Q ss_pred EEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee--CCCCCcEEEEEECCCC--CE
Q 038577 373 VKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT--TPSSRQFVSLASDQSG--EV 448 (860)
Q Consensus 373 i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~ 448 (860)
|++||+.++.....+.+|...|.+++|+|++++|++++.|++|++||........... ..+...+.+++++|++ ..
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 9999999999999999999999999999999999999999999999986544333222 2355679999999987 68
Q ss_pred EEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEe
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYR 528 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 528 (860)
+++++.|+ .|++||+++++....+.+|.+.|++++|+|++++|++++.||.|++||+.+++.+.. ..+...+.+++|+
T Consensus 534 l~s~s~d~-~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~-~~~~~~v~~~~~s 611 (694)
T 3dm0_A 534 IVSASWDK-TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS-LEANSVIHALCFS 611 (694)
T ss_dssp EEEEETTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC-CBCSSCEEEEEEC
T ss_pred EEEEeCCC-eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE-ecCCCcEEEEEEc
Confidence 99999998 999999999999999999999999999999999999999999999999999875443 4456789999999
Q ss_pred eCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEE
Q 038577 529 PDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMY 608 (860)
Q Consensus 529 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vw 608 (860)
|++.+|++++ ++.|++||+.+++.+..+..+........... .......+...+++++|||||++|++|+.||.|++|
T Consensus 612 p~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 612 PNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNS-GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp SSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC-----------------CCCCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccccc-ccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEE
Confidence 9999888776 56699999999999888765432110000000 000001112247899999999999999999999999
Q ss_pred ECC
Q 038577 609 DVA 611 (860)
Q Consensus 609 d~~ 611 (860)
++.
T Consensus 690 ~i~ 692 (694)
T 3dm0_A 690 GIG 692 (694)
T ss_dssp EC-
T ss_pred ecc
Confidence 985
No 61
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.4e-35 Score=318.05 Aligned_cols=289 Identities=20% Similarity=0.372 Sum_probs=251.4
Q ss_pred eEEEEeecCcee-EEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEE
Q 038577 298 CIHLLSISREKI-TTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVW 376 (860)
Q Consensus 298 ~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 376 (860)
....+..|...+ .++. ++++.+++++.+ |.|++||+.+++.+..+.+|...|.+++|+|++ .+++|+.||.|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~--~~~~~l~sgs~d-g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQ--FEDNYVITGADD-KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEE--EETTEEEEEETT-SCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred ceEEEcCCCCCcEEEEE--ECCCEEEEEcCC-CcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 445677777765 4444 467788877765 999999999999999999999999999999988 99999999999999
Q ss_pred ECCCCeeEEEeecCCCceEEEEEee--CCCEEEEEeCCCcEEEEEccccceeeE----------------------eeCC
Q 038577 377 TVSSGFCFVTFTEHTNAVTALHFMA--NNHSLLSASLDGTVRAWDLFRYRNFRT----------------------FTTP 432 (860)
Q Consensus 377 d~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~----------------------~~~~ 432 (860)
|+.+++.+..+.+|...|.+++|++ ++.++++++.||.|++||+.+...... ....
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 9999999999999999999999984 778999999999999999987654321 2223
Q ss_pred CCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce
Q 038577 433 SSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS 512 (860)
Q Consensus 433 ~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 512 (860)
+...+.++ ++++.++++++.|+ .|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|++||+.+++..
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDN-TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccceEEEE--cCCCCEEEEEeCCC-eEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 33344444 68899999999999 9999999999999999999999999999999999999999999999999999988
Q ss_pred eEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecC
Q 038577 513 VESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSAD 592 (860)
Q Consensus 513 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~ 592 (860)
..+..|...|.+++|+ +++|++++.||.|++||+.+++......... .+..++|+|+
T Consensus 346 ~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 402 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTN---------------------LSAITTFYVS 402 (464)
T ss_dssp EEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTT---------------------CCCEEEEEEC
T ss_pred EEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCC---------------------CccEEEEEeC
Confidence 8888999999999997 5799999999999999999988766664332 3788999999
Q ss_pred CCEEEEecCCCeEEEEECCCceEEE
Q 038577 593 GSYILAGGSSKYICMYDVADQVLLR 617 (860)
Q Consensus 593 g~~l~~~~~dg~v~vwd~~~~~~~~ 617 (860)
+++|++++ ||.|++||+.+++++.
T Consensus 403 ~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 403 DNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CCEEEEec-CCeEEEEECCCCcEEe
Confidence 99999998 8999999999998775
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.6e-36 Score=315.62 Aligned_cols=311 Identities=17% Similarity=0.182 Sum_probs=258.8
Q ss_pred EeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce--EEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 038577 302 LSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES--YILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS 379 (860)
Q Consensus 302 ~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 379 (860)
+..+..+|.+++|+|+++.+++++.+ +.|++||+.+++ ....+.+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d-~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNN-HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSS-SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCC-CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 44578899999999999999988765 999999999987 788888999999999999999999999999999999998
Q ss_pred CCeeEEE--eecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccce---eeEeeCCCCCcEEEEEECCCCCEEEEEec
Q 038577 380 SGFCFVT--FTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRN---FRTFTTPSSRQFVSLASDQSGEVICAGTL 454 (860)
Q Consensus 380 ~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 454 (860)
+++.... +..|...|.+++|+|+++++++++.|+.+++||+..... ...+..++...+.+++++|+++++++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8875444 467899999999999999999999999999999988763 44555666778999999999999999999
Q ss_pred CCCeEEEEEC------------------CCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEc
Q 038577 455 DSFEIFVWSM------------------KTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESF 516 (860)
Q Consensus 455 ~~~~i~v~d~------------------~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 516 (860)
++ .|++||+ ..++.+..+.+|...|.+++|+|++++|++++.||.|++||+.+++....+.
T Consensus 163 dg-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 163 DF-KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TS-CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CC-CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 98 9999995 4678899999999999999999999999999999999999999998888888
Q ss_pred ccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC--Cc--eeEEEecccccCCCccc----------cccc-------cc
Q 038577 517 PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN--GE--LMYTIEGRRDISGGRLM----------TDRR-------SA 575 (860)
Q Consensus 517 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~--~~--~~~~~~~~~~~~~~~~~----------~~~~-------~~ 575 (860)
.|..++.+++|+|++++++++ .|+.|++|++.+ ++ .+..+..+......... .... ..
T Consensus 242 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (372)
T 1k8k_C 242 SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAG 320 (372)
T ss_dssp CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CC
T ss_pred cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccc
Confidence 899999999999999988888 899999999988 53 22222211100000000 0000 11
Q ss_pred cccCCCCcEEEEEEe-cCC---CEEEEecCCCeEEEEECCCceE
Q 038577 576 ANSSSGKCFTTLCYS-ADG---SYILAGGSSKYICMYDVADQVL 615 (860)
Q Consensus 576 ~~~~~~~~i~~l~~s-~~g---~~l~~~~~dg~v~vwd~~~~~~ 615 (860)
....|...|++++|. ++| ++|++++.||.|++||+.+++.
T Consensus 321 ~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~ 364 (372)
T 1k8k_C 321 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 364 (372)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHH
T ss_pred ccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhH
Confidence 123667789999966 677 9999999999999999987653
No 63
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=328.00 Aligned_cols=360 Identities=10% Similarity=0.115 Sum_probs=274.7
Q ss_pred EEcCCCCeEEEeecCCeEEEEeecccccCcccccceEe-ecCCCcEEEEEEcc-CCCCCccceEEEEcCCccEEEeeecC
Q 038577 148 NWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLL-LGHRDSVVGCFFSV-DKKTDKVNRIYTIARDCYMFSWGFSG 225 (860)
Q Consensus 148 ~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~-~~h~~~i~~~~~~~-~~~~~~~~~l~s~~~dg~i~~w~~~~ 225 (860)
.|+|+++.+++++ .|+... .....+ .+|.+.|.+++|+| ++. +|++++.||+|++||+.+
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g-------~~~~~~~~~h~~~V~~~~~s~~~~~-----~l~s~s~dg~v~vwd~~~ 95 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRG-------KLIATLMENEPNSITSSAVSPGETP-----YLITGSDQGVIKIWNLKE 95 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCC-------CEEEEECTTTTSCEEEEEEECSSSC-----EEEEEETTSEEEEEEHHH
T ss_pred hcCCccccccccc------cccccc-------eEEeeeccCCCCceEEEEECCCCCC-----EEEEecCCceEEEeECcc
Confidence 3677777777665 377443 355666 88999999999999 998 999999999999999876
Q ss_pred CCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECC---CceeEEEE
Q 038577 226 NDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMP---DFVCIHLL 302 (860)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~---~~~~~~~~ 302 (860)
..... .+ .......|...|.+++|+|+++.+++++.||.|++||+. +++.....
T Consensus 96 ~~~~~--------------------~~---~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 152 (437)
T 3gre_A 96 IIVGE--------------------VY---SSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFL 152 (437)
T ss_dssp HHTTC--------------------CC---SCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEE
T ss_pred cccCc--------------------cc---ceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecc
Confidence 21100 00 001111477899999999999999999999999999984 44444443
Q ss_pred eecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEE--EcCCCCEEEEEeCCCcEEEEECCC
Q 038577 303 SISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLA--YSPDSQLLATGADDNKVKVWTVSS 380 (860)
Q Consensus 303 ~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~--~s~~~~~l~~~~~dg~i~iwd~~~ 380 (860)
..+ .+..+.+++++ +...+.++. +++++.++++++.||.|++||+.+
T Consensus 153 ~~~--~i~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 153 NCE--CIRKINLKNFG-----------------------------KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp EEE--EEEEEEGGGGS-----------------------------SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT
T ss_pred ccc--eeEEEEccCcc-----------------------------cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 333 34444443322 344566666 678999999999999999999999
Q ss_pred CeeEEEeec--CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEEC----CCCCEEEEEec
Q 038577 381 GFCFVTFTE--HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASD----QSGEVICAGTL 454 (860)
Q Consensus 381 ~~~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~ 454 (860)
++.+..+.. |...|.+++|+|++++|++++.||.|++||+++++....+...+...+.+++++ +++.++++++.
T Consensus 202 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 202 LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEEST
T ss_pred CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcC
Confidence 999999988 899999999999999999999999999999999999888876777789999655 56889999999
Q ss_pred CCCeEEEEECCCCceEEEecC--------------------------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q 038577 455 DSFEIFVWSMKTGRLLDILSG--------------------------HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE 508 (860)
Q Consensus 455 ~~~~i~v~d~~~~~~~~~~~~--------------------------h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 508 (860)
|+ .|++||+++++.+..+.+ |...|++++|+ ++++|++++.||.|++||+.+
T Consensus 282 dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 282 KT-FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp TE-EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTC
T ss_pred CC-cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCC
Confidence 98 999999999998877764 45568889999 778999999999999999999
Q ss_pred CcceeEEcccC---CCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEE
Q 038577 509 GKGSVESFPHT---HDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFT 585 (860)
Q Consensus 509 ~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 585 (860)
++....+..|. .......++++..+++.. |+...+........|.+ .|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~h~~--------------------~I~ 411 (437)
T 3gre_A 360 LSSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDSLYHHD--------------------IIN 411 (437)
T ss_dssp GGGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC-------------CC--------------------CEE
T ss_pred cccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccCccccccc--------------------cee
Confidence 98777776643 345556666665555444 33333344444444543 699
Q ss_pred EEEEecC--CCEEEEecCCCeEEEEE
Q 038577 586 TLCYSAD--GSYILAGGSSKYICMYD 609 (860)
Q Consensus 586 ~l~~s~~--g~~l~~~~~dg~v~vwd 609 (860)
+++|+++ +.+|++|+.||.|++|+
T Consensus 412 ~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 412 SISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred eEeeeccCCceEEEEEcCCceEEEeC
Confidence 9999998 78999999999999995
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=9.1e-35 Score=317.79 Aligned_cols=319 Identities=18% Similarity=0.300 Sum_probs=273.0
Q ss_pred ccccCCCCce-EEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc
Q 038577 258 DDFSQAPSKV-TACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW 336 (860)
Q Consensus 258 ~~~~~~~~~v-~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~ 336 (860)
..+.+|...+ .++.+ +++++++|+.||.|++||+.+++.+..+..|...|.+++|++++ .+++++. ||.|++||+
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~-dg~i~vwd~ 190 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST-DRTVRVWDI 190 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET-TSCEEEEET
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC-CCCEEEEEC
Confidence 3455676664 55555 56799999999999999999999999999999999999999988 6666655 499999999
Q ss_pred cCceEEEEecCcccCeEEEEEc--CCCCEEEEEeCCCcEEEEECCCCe-----------------------eEEEeecCC
Q 038577 337 RSESYILKQQGHYFDVNCLAYS--PDSQLLATGADDNKVKVWTVSSGF-----------------------CFVTFTEHT 391 (860)
Q Consensus 337 ~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~iwd~~~~~-----------------------~~~~~~~~~ 391 (860)
.+++.+..+.+|...|.+++|+ +++.++++|+.||.|++||+.++. ....+.+|.
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 9999999999999999999998 578899999999999999998765 255677888
Q ss_pred CceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEE
Q 038577 392 NAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLD 471 (860)
Q Consensus 392 ~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~ 471 (860)
..+.++ +++++++++++.||.|++||+.+++....+.. +...+.+++++|+++++++++.|+ .|++||+++++.+.
T Consensus 271 ~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~sg~~dg-~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 271 ASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIYDHERKRCISASMDT-TIRIWDLENGELMY 346 (464)
T ss_dssp SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEETTTTEEEEEETTS-CEEEEETTTTEEEE
T ss_pred ceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCCcEEE
Confidence 888887 57788999999999999999999988887764 456899999999999999999999 99999999999999
Q ss_pred EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q 038577 472 ILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNG 551 (860)
Q Consensus 472 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 551 (860)
.+.+|...|.+++|+ ++++++++.||.|++||+.+..... ...+...+..++|+|+++++++++ ||.|++||+.++
T Consensus 347 ~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 347 TLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF-SYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp EECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE-EEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred EEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee-eecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 999999999999997 5899999999999999999876433 335777888899999999999998 899999999999
Q ss_pred ceeEE-EecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEE
Q 038577 552 ELMYT-IEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYD 609 (860)
Q Consensus 552 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd 609 (860)
+.+.. +..+. ..|.+++|+ ++.++++++.||.+.+|-
T Consensus 423 ~~~~~~~~~~~--------------------~~v~~v~~~-~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 423 KLVHANILKDA--------------------DQIWSVNFK-GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp CEEESCTTTTC--------------------SEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred cEEehhhccCC--------------------CcEEEEEec-CCEEEEEEEeCCeEEEEE
Confidence 98876 33332 369999997 344555666777665553
No 65
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8e-36 Score=314.29 Aligned_cols=313 Identities=15% Similarity=0.173 Sum_probs=248.4
Q ss_pred EEEeecCceeEEEEEeeCCCEEEEEEcc---CCcEEEEEccCceEEEEe-cCcccCeEEEEEcCC---CCEEEEEeCCCc
Q 038577 300 HLLSISREKITTAVFNELGNWLVFGCAK---LGQLLVWEWRSESYILKQ-QGHYFDVNCLAYSPD---SQLLATGADDNK 372 (860)
Q Consensus 300 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~---~g~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~---~~~l~~~~~dg~ 372 (860)
.....|...|.+++|+|++..++++++. +|.|++||+.+++..... .+|...|.+++|+|+ +.++++|+.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3456788999999999999888877764 799999999988765443 478899999999999 699999999999
Q ss_pred EEEEECCCCe-eEEEeecCCCceEEEEE------eeCCCEEEEEeCCCcEEEEEccccc-eeeEeeCCC---CCcEEEEE
Q 038577 373 VKVWTVSSGF-CFVTFTEHTNAVTALHF------MANNHSLLSASLDGTVRAWDLFRYR-NFRTFTTPS---SRQFVSLA 441 (860)
Q Consensus 373 i~iwd~~~~~-~~~~~~~~~~~v~~i~~------~~~~~~l~s~~~dg~i~~wd~~~~~-~~~~~~~~~---~~~~~~~~ 441 (860)
|++||+.++. .+..+.+|...|.++.| +|+++.|++++.||.|++||+.+++ ....+.... ...+.+++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999888 88889999999999965 6789999999999999999999886 555554332 33678887
Q ss_pred ----ECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcC---CCCEEEEEeCCCcEEEEEccCCcceeE
Q 038577 442 ----SDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSP---TNATLASSSWDKTVRLWNVFEGKGSVE 514 (860)
Q Consensus 442 ----~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~---~~~~l~s~~~dg~i~iwd~~~~~~~~~ 514 (860)
++|++.++++++.++ .|++||+++++.... ..|...|.+++|+| ++.++++++.||.|++||+.+++....
T Consensus 172 ~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNG-DIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp EECCCC-CCCEEEEEETTS-EEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred EEeccCCCCCEEEEEccCC-eEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 789999999999998 999999999887554 55899999999999 999999999999999999988765544
Q ss_pred Ec-----ccCCCeEEEEEeeCCC-EEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEE
Q 038577 515 SF-----PHTHDVLTVVYRPDGR-QLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLC 588 (860)
Q Consensus 515 ~~-----~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 588 (860)
.. .|...|++++|+|+++ +|++++.||.|++||+.++............. +.............+...|++++
T Consensus 250 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~v~~~~ 328 (357)
T 3i2n_A 250 FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM-GVAGSVSLLQNVTLSTQPISSLD 328 (357)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCC-CCCCEEEEEEEEECCSSCEEEEE
T ss_pred eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcc-ccccccceeeccccCCCCeeEEE
Confidence 43 7999999999999998 89999999999999998664332111100000 00000001111122344799999
Q ss_pred EecCCCEEE-EecCCCeEEEEECCCceE
Q 038577 589 YSADGSYIL-AGGSSKYICMYDVADQVL 615 (860)
Q Consensus 589 ~s~~g~~l~-~~~~dg~v~vwd~~~~~~ 615 (860)
|+|+|++|+ +++.||.|++||+.+.++
T Consensus 329 ~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 329 WSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 999999998 899999999999987654
No 66
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.9e-35 Score=316.22 Aligned_cols=292 Identities=15% Similarity=0.208 Sum_probs=261.1
Q ss_pred eeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce------eEEEEeecCceeEEEEEeeC----C---CEEE
Q 038577 256 RKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV------CIHLLSISREKITTAVFNEL----G---NWLV 322 (860)
Q Consensus 256 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~------~~~~~~~~~~~i~~~~~s~~----~---~~l~ 322 (860)
....+.+|...|.+++|+| ++|++++.||.|++|++.+++ ....+..+...|.+++|+|+ + +.++
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 3456778999999999999 899999999999999999887 78888899999999999999 8 8888
Q ss_pred EEEccCCcEEEEEccCceE-----EEEecCc-----ccCeEEEEEc----CCCCE-EEEEeCCCcEEEEECCC------C
Q 038577 323 FGCAKLGQLLVWEWRSESY-----ILKQQGH-----YFDVNCLAYS----PDSQL-LATGADDNKVKVWTVSS------G 381 (860)
Q Consensus 323 ~~~~~~g~i~v~d~~~~~~-----~~~~~~~-----~~~v~~~~~s----~~~~~-l~~~~~dg~i~iwd~~~------~ 381 (860)
+++.+ |.|++|++.++.. ...+..| ...|.+++|+ |+++. |++++.||.|++||+.+ +
T Consensus 86 s~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 86 TTSFS-GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEETT-SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEcCC-CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 88765 9999999998876 7778888 5899999999 99999 99999999999999988 6
Q ss_pred eeEE-----Ee-------ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCC--C---CCcEEEEEECC
Q 038577 382 FCFV-----TF-------TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTP--S---SRQFVSLASDQ 444 (860)
Q Consensus 382 ~~~~-----~~-------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~---~~~~~~~~~~~ 444 (860)
..+. .+ ..|...|.+++|+|++ .+++++.||.|++||+.+++....+... + ...+.+++++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 5555 66 4488999999999999 9999999999999999999888888761 3 56899999999
Q ss_pred CCCEEEEEecC---CCeEEEEECCCCceEEEecC-------------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q 038577 445 SGEVICAGTLD---SFEIFVWSMKTGRLLDILSG-------------HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE 508 (860)
Q Consensus 445 ~~~~l~~~~~~---~~~i~v~d~~~~~~~~~~~~-------------h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 508 (860)
++.++++++.+ + .|++||+++++.+..+.+ |...|.+++|+|++++|++++.||.|++||+.+
T Consensus 244 ~~~~l~~~~~d~~~g-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFG-CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp STTEEEEEEEETTEE-EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEecCCCCc-eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999998 7 999999999999999998 999999999999999999999999999999999
Q ss_pred CcceeEEc------cc---------------CCCeEEEEEeeCC----------CEEEEEeCCCeEEEEeCCCCc
Q 038577 509 GKGSVESF------PH---------------THDVLTVVYRPDG----------RQLACSTLDGQIHFWDPLNGE 552 (860)
Q Consensus 509 ~~~~~~~~------~~---------------~~~v~~~~~s~~~----------~~l~~~~~dg~i~iwd~~~~~ 552 (860)
++....+. .| ...|++++|+|++ ++|++++.||.|++|++.+|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 98777777 67 8999999999998 799999999999999998764
No 67
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-35 Score=309.00 Aligned_cols=298 Identities=12% Similarity=0.181 Sum_probs=268.4
Q ss_pred eccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc
Q 038577 257 KDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW 336 (860)
Q Consensus 257 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~ 336 (860)
...+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|+++.+++++.+ |.|++||+
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~ 103 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD-YSIKLWDV 103 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-TEEEEEET
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC-CeEEEEEC
Confidence 34567899999999999999999999999999999999999999999999999999999999999988776 99999999
Q ss_pred cCceEEEEecCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe-----------eEEEeecCCC--ceEEEE
Q 038577 337 RSESYILKQQGHYFDVNCLAYSPDSQLLATGADD-----NKVKVWTVSSGF-----------CFVTFTEHTN--AVTALH 398 (860)
Q Consensus 337 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~v~~i~ 398 (860)
.+++.+..+. +...+.+++|+|+++++++++.+ |.|++||+..+. ....+..|.. .+.+++
T Consensus 104 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (369)
T 3zwl_B 104 SNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAG 182 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEE
T ss_pred CCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEE
Confidence 9999888877 88899999999999999999999 999999987543 3344555666 999999
Q ss_pred EeeCCCEEEEEeCCCcEEEEEccc-cceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcc
Q 038577 399 FMANNHSLLSASLDGTVRAWDLFR-YRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHE 477 (860)
Q Consensus 399 ~~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~ 477 (860)
|+|+++.+++++.||.|++||+.+ .+....+.. +...+.+++++|++.++++++.++ .|++||+++++.+..+. +.
T Consensus 183 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~-~~ 259 (369)
T 3zwl_B 183 WSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITSSRDT-NSFLVDVSTLQVLKKYE-TD 259 (369)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTCCEEEEEE-CS
T ss_pred EcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEecCCc-eEEEEECCCCceeeeec-CC
Confidence 999999999999999999999998 555555554 456899999999999999999998 99999999999998888 78
Q ss_pred cCeEEEEEcCCCCEEEEEeCCC--------------cEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeE
Q 038577 478 GPVHGLVFSPTNATLASSSWDK--------------TVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQI 543 (860)
Q Consensus 478 ~~v~~l~~s~~~~~l~s~~~dg--------------~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 543 (860)
..+.+++|+|+++++++++.++ .+++||+.+++....+..|...|++++|+|++++|++++.||.|
T Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v 339 (369)
T 3zwl_B 260 CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFI 339 (369)
T ss_dssp SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeE
Confidence 8999999999999999999988 89999999999888888999999999999999999999999999
Q ss_pred EEEeCCCCceeEEEec
Q 038577 544 HFWDPLNGELMYTIEG 559 (860)
Q Consensus 544 ~iwd~~~~~~~~~~~~ 559 (860)
++|++.++.....+..
T Consensus 340 ~iw~~~~~~~~~~~~~ 355 (369)
T 3zwl_B 340 RLHHFEKSYFDFKYDV 355 (369)
T ss_dssp EEEEECHHHHTCCCHH
T ss_pred EEEECccccchhHHHH
Confidence 9999988765554443
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.5e-35 Score=312.11 Aligned_cols=293 Identities=12% Similarity=0.231 Sum_probs=246.2
Q ss_pred CCCceeEEEEeecCceeEEEEEeeCC-CEEEEEEccCCcEEEEEccCceEEEEec--CcccCeEEEEEcC-CCCEEEEEe
Q 038577 293 MPDFVCIHLLSISREKITTAVFNELG-NWLVFGCAKLGQLLVWEWRSESYILKQQ--GHYFDVNCLAYSP-DSQLLATGA 368 (860)
Q Consensus 293 ~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~~~g~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~l~~~~ 368 (860)
.........+..|...|.+++|+|++ +.+++++.+ |.|++||+.++.....+. +|...|.+++|+| ++++|++++
T Consensus 60 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 60 LKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKG-GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp HTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBT-SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred ccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCC-CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 34556677788899999999999999 777777665 999999999887776664 6999999999999 789999999
Q ss_pred CCCcEEEEECCCCeeEEEeecC---CCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCC
Q 038577 369 DDNKVKVWTVSSGFCFVTFTEH---TNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQS 445 (860)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~---~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (860)
.|+.|++||+.+ .....+..+ ...|.+++|+|+++++++++.|+.|++||+ +++....+.. +...+.+++++|+
T Consensus 139 ~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~-h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 139 IRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL-HKAKVTHAEFNPR 215 (383)
T ss_dssp TTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC-SSSCEEEEEECSS
T ss_pred CCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc-CCCcEEEEEECCC
Confidence 999999999985 555555444 478999999999999999999999999999 5666666654 4468999999999
Q ss_pred CC-EEEEEecCCCeEEEEECCC----CceEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCcceeEEcccC
Q 038577 446 GE-VICAGTLDSFEIFVWSMKT----GRLLDILSGHEGPVHGLVFSP-TNATLASSSWDKTVRLWNVFEGKGSVESFPHT 519 (860)
Q Consensus 446 ~~-~l~~~~~~~~~i~v~d~~~----~~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 519 (860)
+. ++++++.|+ .|++||+++ +..+..+ +|...|.+++|+| ++++|++++.|+.|++||+.+++....+..|.
T Consensus 216 ~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 216 CDWLMATSSVDA-TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp CTTEEEEEETTS-EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred CCCEEEEEeCCC-EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 99 899999998 999999998 6667666 6999999999999 99999999999999999999887655554332
Q ss_pred -----------------CCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCC
Q 038577 520 -----------------HDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGK 582 (860)
Q Consensus 520 -----------------~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (860)
..+..++|+|++++ +++.||.|++||+.+++.+..+.++.. ..
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~------------------~~ 353 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNA------------------AG 353 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTB------------------CS
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCC------------------Cc
Confidence 34455667777766 777899999999999999999987532 12
Q ss_pred cEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 038577 583 CFTTLCYSADGSYILAGGSSKYICMYDVAD 612 (860)
Q Consensus 583 ~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~ 612 (860)
.+..++|+|+|++|++++ ||.|++||+++
T Consensus 354 ~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 354 IISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred eEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 477889999999999997 99999999875
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=297.16 Aligned_cols=291 Identities=18% Similarity=0.239 Sum_probs=260.9
Q ss_pred eccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc
Q 038577 257 KDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW 336 (860)
Q Consensus 257 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~ 336 (860)
...+.+|...|.+++| |+++++++++.||.|++||+.+++....+..+...+.+++|+|+++.+++++.+ |.+++|++
T Consensus 11 ~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~~ 88 (313)
T 3odt_A 11 SATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-TMINGVPL 88 (313)
T ss_dssp EEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-SCEEEEET
T ss_pred HHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-CeEEEEEe
Confidence 3456789999999999 999999999999999999999999999999999999999999999999998876 99999998
Q ss_pred cCc---eEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEee-CCCEEEEEeCC
Q 038577 337 RSE---SYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA-NNHSLLSASLD 412 (860)
Q Consensus 337 ~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~d 412 (860)
... +....+.+|...|.+++| +++.+++++.||.|++|| .+.....+..|...+.++.+.| ++..+++++.|
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 164 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD 164 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT
T ss_pred eecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECC
Confidence 654 556777889999999999 577999999999999999 7888888999999999999998 88999999999
Q ss_pred CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEE
Q 038577 413 GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATL 492 (860)
Q Consensus 413 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l 492 (860)
|.+++|| ..+....+...+...+.+++++|++. +++++.++ .|++||+++++.+..+.+|.++|++++|+|++ .+
T Consensus 165 ~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 239 (313)
T 3odt_A 165 KTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDG-LIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DI 239 (313)
T ss_dssp SCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTS-EEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CE
T ss_pred CCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCC-eEEEEECCchhhhhhhhcCCceEEEEEEecCC-CE
Confidence 9999999 45566667766778899999999999 88888888 99999999999999999999999999999999 58
Q ss_pred EEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEec
Q 038577 493 ASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEG 559 (860)
Q Consensus 493 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 559 (860)
++++.||.|++||+.+++....+..|...|.+++|+|+++ +++++.||.|++||+.+++.......
T Consensus 240 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~~~ 305 (313)
T 3odt_A 240 VSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASEDEI 305 (313)
T ss_dssp EEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC----
T ss_pred EEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehhhh
Confidence 8999999999999999988888888999999999999998 66789999999999998877655443
No 70
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-34 Score=296.45 Aligned_cols=292 Identities=16% Similarity=0.212 Sum_probs=257.4
Q ss_pred CceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEE
Q 038577 295 DFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVK 374 (860)
Q Consensus 295 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 374 (860)
..+....+..|...|.+++| ++++.+++++.+ |.|++||+.++.....+..|...|.+++|+|+++++++++.||.|+
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~d-g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VDDSKVASVSRD-GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EETTEEEEEETT-SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcC-CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 34677888999999999999 999999988766 9999999999999988899999999999999999999999999999
Q ss_pred EEECCCC---eeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECC-CCCEEE
Q 038577 375 VWTVSSG---FCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQ-SGEVIC 450 (860)
Q Consensus 375 iwd~~~~---~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 450 (860)
+|++... +....+..|...|.++.| +++.+++++.||.|++|| ..+....+.. +...+.++.+.| ++..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA-HNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC-CSSCEEEEEEEETTTTEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc-CCCceeEEEEccCCCCEEE
Confidence 9998754 667788899999999999 567999999999999999 5555555554 455788888877 999999
Q ss_pred EEecCCCeEEEEECCCCceEEEecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEee
Q 038577 451 AGTLDSFEIFVWSMKTGRLLDILSG-HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRP 529 (860)
Q Consensus 451 ~~~~~~~~i~v~d~~~~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~ 529 (860)
+++.++ .|++|| .++....+.. |...|.+++|+|++. +++++.||.|++||+.+++....+..|...|++++|+|
T Consensus 160 ~~~~d~-~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 235 (313)
T 3odt_A 160 TASADK-TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLP 235 (313)
T ss_dssp EEETTS-CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EEECCC-CEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEec
Confidence 999998 999999 5566777777 999999999999998 99999999999999999988888888999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEE
Q 038577 530 DGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYD 609 (860)
Q Consensus 530 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd 609 (860)
++ .|++++.||.|++||+.+++.+..+..|.. .|.+++|+|+|+ +++++.||.|++||
T Consensus 236 ~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 236 NG-DIVSCGEDRTVRIWSKENGSLKQVITLPAI--------------------SIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp TS-CEEEEETTSEEEEECTTTCCEEEEEECSSS--------------------CEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred CC-CEEEEecCCEEEEEECCCCceeEEEeccCc--------------------eEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 99 588999999999999999999999988764 599999999999 56789999999999
Q ss_pred CCCceEEEEE
Q 038577 610 VADQVLLRRF 619 (860)
Q Consensus 610 ~~~~~~~~~~ 619 (860)
+.+++.+...
T Consensus 294 ~~~~~~~~~~ 303 (313)
T 3odt_A 294 QEKSRWASED 303 (313)
T ss_dssp SCGGGCCC--
T ss_pred CCCCceeehh
Confidence 9998766543
No 71
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.2e-35 Score=314.18 Aligned_cols=289 Identities=19% Similarity=0.251 Sum_probs=247.4
Q ss_pred EeecCceeEEEEEeeC---C-CEEEEEEccCCcEEEEEccCceEEEEecC-----cccCeEEEEEcCC----CCEEEEEe
Q 038577 302 LSISREKITTAVFNEL---G-NWLVFGCAKLGQLLVWEWRSESYILKQQG-----HYFDVNCLAYSPD----SQLLATGA 368 (860)
Q Consensus 302 ~~~~~~~i~~~~~s~~---~-~~l~~~~~~~g~i~v~d~~~~~~~~~~~~-----~~~~v~~~~~s~~----~~~l~~~~ 368 (860)
...|...|.+++|+|+ + ..+++++.+ +.|++||+.++..+..+.. |...|.+++|+|+ +.+|++|+
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGS-NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEET-TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCC-CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 3468889999999984 4 445555554 7999999998876655543 5578999999999 67999999
Q ss_pred CCCcEEEEECCCCeeEEEeecCCCceEEEEEee-CCCEEEEEeCCCcEEEEEccccceeeEee--CCCCCcEEEEEECCC
Q 038577 369 DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA-NNHSLLSASLDGTVRAWDLFRYRNFRTFT--TPSSRQFVSLASDQS 445 (860)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~ 445 (860)
.||.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+.+++....+. ..+...+.+++++|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 89999999999999999999998887774 456678999999999
Q ss_pred CCEEEEEecCCCeEEEEECCCCceEEEec----------------------------CcccCeEEEEEcCCCCEEEEEeC
Q 038577 446 GEVICAGTLDSFEIFVWSMKTGRLLDILS----------------------------GHEGPVHGLVFSPTNATLASSSW 497 (860)
Q Consensus 446 ~~~l~~~~~~~~~i~v~d~~~~~~~~~~~----------------------------~h~~~v~~l~~s~~~~~l~s~~~ 497 (860)
+.++++++.|+ .|++||+++++....+. +|...|.+++|+ ++++++++.
T Consensus 173 ~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 173 GEKIMSCGMDH-SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp SSEEEEEETTS-CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECS
T ss_pred CCEEEEecCCC-CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEec
Confidence 99999999998 99999999876544333 399999999998 779999999
Q ss_pred CCcEEEEEccCCcc--------------eeEEcccCCCeEEEEEeeC--CCEEEEEeCCCeEEEEeCCCCcee----EEE
Q 038577 498 DKTVRLWNVFEGKG--------------SVESFPHTHDVLTVVYRPD--GRQLACSTLDGQIHFWDPLNGELM----YTI 557 (860)
Q Consensus 498 dg~i~iwd~~~~~~--------------~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~----~~~ 557 (860)
||.|++||+.+... ......|...|++++|+|+ +++|++++.||.|++||+.+++.. ..+
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence 99999999987754 4555678889999999999 999999999999999999988643 355
Q ss_pred ecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 038577 558 EGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVAD 612 (860)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~ 612 (860)
.+|.. ...|++++|+|+|++|++++.||.|++||+.+
T Consensus 330 ~~~~~------------------~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 330 THHKC------------------GAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CCTTC------------------CSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred ccccc------------------CCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 55521 23699999999999999999999999999853
No 72
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.8e-34 Score=328.44 Aligned_cols=295 Identities=21% Similarity=0.288 Sum_probs=238.6
Q ss_pred EEEEEeeccCCCeEEEEEcCCC-CeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEE
Q 038577 132 ELIRTLADCNDKVTALNWSPDS-NYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIY 210 (860)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~s~d~-~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~ 210 (860)
.+...+.+|.+.|++++|+|++ ++|++|+.|++|++|++... ..........+.+|...|.+++|+|+++ +|+
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~-~~~~~~~~~~~~~h~~~v~~v~~s~~g~-----~l~ 446 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKD-DKAYGVAQRRLTGHSHFVEDVVLSSDGQ-----FAL 446 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCS-TTCSCEEEEEEECCSSCEEEEEECTTSS-----EEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCC-CcccccccceecCCCCcEEEEEECCCCC-----EEE
Confidence 4566789999999999999875 78999999999999999765 1111122344555665555555555555 455
Q ss_pred EEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEE
Q 038577 211 TIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGL 290 (860)
Q Consensus 211 s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~ 290 (860)
+++.| |.|++
T Consensus 447 sgs~D----------------------------------------------------------------------g~v~v 456 (694)
T 3dm0_A 447 SGSWD----------------------------------------------------------------------GELRL 456 (694)
T ss_dssp EEETT----------------------------------------------------------------------SEEEE
T ss_pred EEeCC----------------------------------------------------------------------CcEEE
Confidence 55544 45555
Q ss_pred EECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe---cCcccCeEEEEEcCCC--CEEE
Q 038577 291 YQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ---QGHYFDVNCLAYSPDS--QLLA 365 (860)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~--~~l~ 365 (860)
||+.++.....+..|...|.+++|+|+++.+++++.+ +.|++||.......... .+|...|.+++|+|++ ..++
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D-~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD-RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC-CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 5555555666677888899999999999999988776 99999998765444332 4688899999999987 5899
Q ss_pred EEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCC
Q 038577 366 TGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQS 445 (860)
Q Consensus 366 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (860)
+++.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.. ...+.+++|+|+
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~ 613 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA--NSVIHALCFSPN 613 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC--SSCEEEEEECSS
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC--CCcEEEEEEcCC
Confidence 999999999999999999999999999999999999999999999999999999999988766654 347899999999
Q ss_pred CCEEEEEecCCCeEEEEECCCCceEEEecCcc-------------------cCeEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 038577 446 GEVICAGTLDSFEIFVWSMKTGRLLDILSGHE-------------------GPVHGLVFSPTNATLASSSWDKTVRLWNV 506 (860)
Q Consensus 446 ~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-------------------~~v~~l~~s~~~~~l~s~~~dg~i~iwd~ 506 (860)
+.+++++..+ .|++||+++++.+..+..+. ..+++++|+|+|++|++|+.||.|++||+
T Consensus 614 ~~~l~~~~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i 691 (694)
T 3dm0_A 614 RYWLCAATEH--GIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGI 691 (694)
T ss_dssp SSEEEEEETT--EEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEcCC--CEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEec
Confidence 9998887654 69999999998887765332 13789999999999999999999999998
Q ss_pred c
Q 038577 507 F 507 (860)
Q Consensus 507 ~ 507 (860)
.
T Consensus 692 ~ 692 (694)
T 3dm0_A 692 G 692 (694)
T ss_dssp -
T ss_pred c
Confidence 5
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-34 Score=306.22 Aligned_cols=287 Identities=14% Similarity=0.161 Sum_probs=251.0
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce--eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV--CIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE 339 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~--~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~ 339 (860)
.|...|.+++|+|+++++++++.+|.|++|++.+++ ....+..|...|.+++|+|+++.+++++.+ |.|++||+.++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-RNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-SCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-CeEEEEECCCC
Confidence 467789999999999999999999999999999887 888899999999999999999999988766 99999999988
Q ss_pred eEEEEe--cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee----EEEeecCCCceEEEEEeeCCCEEEEEeCCC
Q 038577 340 SYILKQ--QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFC----FVTFTEHTNAVTALHFMANNHSLLSASLDG 413 (860)
Q Consensus 340 ~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg 413 (860)
+..... ..|...|.+++|+|+++++++++.||.|++||+..+.. ......|...|.+++|+|+++++++++.||
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 755443 67889999999999999999999999999999988762 333366899999999999999999999999
Q ss_pred cEEEEEcc------------------ccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC
Q 038577 414 TVRAWDLF------------------RYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG 475 (860)
Q Consensus 414 ~i~~wd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 475 (860)
.+++||+. .++....+. .+...+.+++++|++.++++++.++ .|++||+++++.+..+..
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDS-TVCLADADKKMAVATLAS 242 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTT-EEEEEEGGGTTEEEEEEC
T ss_pred CEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCC-EEEEEECCCCceeEEEcc
Confidence 99999964 455555554 4456899999999999999999998 999999999999999999
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC--Cc--------------------------------ce------eEE
Q 038577 476 HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE--GK--------------------------------GS------VES 515 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~--~~--------------------------------~~------~~~ 515 (860)
|..+|.+++|+|++++++++ .|+.|++|++.+ +. .. ..+
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGL 321 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCC
T ss_pred CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccc
Confidence 99999999999999988887 899999999987 31 00 222
Q ss_pred -cccCCCeEEEEEe-eCC---CEEEEEeCCCeEEEEeCCCCc
Q 038577 516 -FPHTHDVLTVVYR-PDG---RQLACSTLDGQIHFWDPLNGE 552 (860)
Q Consensus 516 -~~~~~~v~~~~~s-~~~---~~l~~~~~dg~i~iwd~~~~~ 552 (860)
.+|...|++++|. ++| .+|++++.||.|++||+.+++
T Consensus 322 ~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 322 DSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 3799999999976 566 999999999999999987654
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.8e-35 Score=307.92 Aligned_cols=287 Identities=16% Similarity=0.228 Sum_probs=249.6
Q ss_pred ccCCCCceEEEEecCC----CCEEEEEEcCCeEEEEECCCceeEEEEee-----cCceeEEEEEeeC----CCEEEEEEc
Q 038577 260 FSQAPSKVTACDYHRG----LDMVVVGFSNGVFGLYQMPDFVCIHLLSI-----SREKITTAVFNEL----GNWLVFGCA 326 (860)
Q Consensus 260 ~~~~~~~v~~~~~~~~----~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-----~~~~i~~~~~s~~----~~~l~~~~~ 326 (860)
..+|...|.+++|+|+ ...+++++.++.|++|++.+++.+..+.. +...+.+++|+|+ +..+++++.
T Consensus 14 ~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 14 KEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp ECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3478899999999994 56788888888999999998887766664 3467999999999 557777766
Q ss_pred cCCcEEEEEccCceEEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeEEEe---ecCCCceEEEEEeeC
Q 038577 327 KLGQLLVWEWRSESYILKQQGHYFDVNCLAYSP-DSQLLATGADDNKVKVWTVSSGFCFVTF---TEHTNAVTALHFMAN 402 (860)
Q Consensus 327 ~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~ 402 (860)
+ |.|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|+
T Consensus 94 d-g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 94 R-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp T-CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred C-CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 5 9999999999999999999999999999999 9999999999999999999999999888 689999999999999
Q ss_pred CCEEEEEeCCCcEEEEEccccceeeEeeC---------------------------CCCCcEEEEEECCCCCEEEEEecC
Q 038577 403 NHSLLSASLDGTVRAWDLFRYRNFRTFTT---------------------------PSSRQFVSLASDQSGEVICAGTLD 455 (860)
Q Consensus 403 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~l~~~~~~ 455 (860)
+++|++++.||.|++||+.+++....+.. .+...+.+++++ ++++++++.+
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d 250 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCE 250 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecC
Confidence 99999999999999999987654433221 155678889998 7799999999
Q ss_pred CCeEEEEECCCCce--------------EEEecCcccCeEEEEEcCC--CCEEEEEeCCCcEEEEEccCCccee----EE
Q 038577 456 SFEIFVWSMKTGRL--------------LDILSGHEGPVHGLVFSPT--NATLASSSWDKTVRLWNVFEGKGSV----ES 515 (860)
Q Consensus 456 ~~~i~v~d~~~~~~--------------~~~~~~h~~~v~~l~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~----~~ 515 (860)
+ .|++||+.+++. +..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++... .+
T Consensus 251 ~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 251 N-AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp S-EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred C-EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence 8 999999988754 7888899999999999999 9999999999999999999876432 45
Q ss_pred ccc--CCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 516 FPH--THDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 516 ~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
..| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 330 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 330 THHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 555 79999999999999999999999999999853
No 75
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=311.39 Aligned_cols=358 Identities=17% Similarity=0.206 Sum_probs=258.1
Q ss_pred cCCeEEEEeecccccCcccccceEeecCCCcEEEEEEcc-CCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCC
Q 038577 161 KDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSV-DKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEP 239 (860)
Q Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~ 239 (860)
.++.+++|+++.. .....+.+|.+.|.+++|+| +++ +|++++.||.|++|++.++........
T Consensus 21 ~~~~~~v~~~~~~------~~~~~~~~h~~~v~~~~~s~~~~~-----~l~~~~~dg~i~iw~~~~~~~~~~~~~----- 84 (408)
T 4a11_B 21 AESTRRVLGLELN------KDRDVERIHGGGINTLDIEPVEGR-----YMLSGGSDGVIVLYDLENSSRQSYYTC----- 84 (408)
T ss_dssp HHHHHHHHTEEEC------TTEEECCCCSSCEEEEEECTTTCC-----EEEEEETTSCEEEEECCCCSSSSCEEE-----
T ss_pred ccCcceeeccccC------cceeeeeccCCcEEEEEEecCCCC-----EEEEEcCCCeEEEEECCCCcccceEec-----
Confidence 3456788888877 56778889999999999999 998 999999999999999987643111000
Q ss_pred CCCCCCcceeeeEEeeeeccccCCCCceEEEEecC-CCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCC
Q 038577 240 PSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHR-GLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELG 318 (860)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 318 (860)
.............|...|.+++|+| ++.++++++.+|.|++||+.+++....+. +...+.++.+++.+
T Consensus 85 ----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~ 153 (408)
T 4a11_B 85 ----------KAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVS 153 (408)
T ss_dssp ----------CEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSC
T ss_pred ----------cccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCC
Confidence 0000011222345888999999999 77899999999999999999998888776 56688999999854
Q ss_pred ---CEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe-eEEEe------
Q 038577 319 ---NWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQ-LLATGADDNKVKVWTVSSGF-CFVTF------ 387 (860)
Q Consensus 319 ---~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~------ 387 (860)
..+++++.+ |.|++||+.++..+..+..|...|.+++|+|+++ .+++++.||.|++||++++. ....+
T Consensus 154 ~~~~~~~~~~~~-~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 232 (408)
T 4a11_B 154 TKHCLVAVGTRG-PKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGK 232 (408)
T ss_dssp SSCCEEEEEESS-SSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTC
T ss_pred CCCcEEEEEcCC-CeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccc
Confidence 477777655 9999999999999999999999999999999998 58999999999999998765 33333
Q ss_pred ---------ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCC----CCCcEEEEEECCCCCEEEEEec
Q 038577 388 ---------TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTP----SSRQFVSLASDQSGEVICAGTL 454 (860)
Q Consensus 388 ---------~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~ 454 (860)
..|...|.+++|+|++++|++++.||.|++||+.+++........ .............+..+++++.
T Consensus 233 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (408)
T 4a11_B 233 KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY 312 (408)
T ss_dssp SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE
T ss_pred cceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec
Confidence 568899999999999999999999999999999987765443321 1111222222334455666666
Q ss_pred CCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEee-CCCE
Q 038577 455 DSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRP-DGRQ 533 (860)
Q Consensus 455 ~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~ 533 (860)
++ .|++||+.+++.+..+.+|.+.|++++|+|++++|++++.||.|++||+.+.+......... ....+.| ....
T Consensus 313 ~~-~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 388 (408)
T 4a11_B 313 GS-TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDA 388 (408)
T ss_dssp TT-EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------------------------
T ss_pred CC-EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---ecccccccccee
Confidence 77 99999999999999999999999999999999999999999999999999887544332221 1122333 3344
Q ss_pred EEEEeCCCeEEEEeCCC
Q 038577 534 LACSTLDGQIHFWDPLN 550 (860)
Q Consensus 534 l~~~~~dg~i~iwd~~~ 550 (860)
+.+.+.++.+++|+...
T Consensus 389 ~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 389 WSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -----------------
T ss_pred ecccCccCceeecCCcc
Confidence 55677789999998653
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=314.66 Aligned_cols=357 Identities=16% Similarity=0.194 Sum_probs=254.9
Q ss_pred CCeEEEEECCCCcEEeeccCCccCeeEEEEcC-CCCEEEEEcCCCcEEEEEcccCeEEEEee--------------cCCc
Q 038577 31 GNRVSVTDLIKSKTVTLPVESSSNICRIAVSP-DGTFLLTVDENQRCHFINLHCHVVLHRVR--------------FKYP 95 (860)
Q Consensus 31 ~~~i~v~d~~~~~~~~~~~~h~~~v~~va~sp-dg~~la~~~~d~~i~vwd~~~~~~~~~~~--------------~~~~ 95 (860)
+..+++|++..++....+.+|.+.|++++|+| ++++||+++.||.|++||+.+++....+. |...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 34577888888888888889999999999999 99999999999999999999876554443 8889
Q ss_pred eeEEEECC-CCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCC---CeEEEeecCCeEEEEee
Q 038577 96 VNAILFSP-NGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDS---NYLLVGSKDLAVRLFYV 170 (860)
Q Consensus 96 v~~~~fsp-dg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~---~~l~s~~~dg~v~vwd~ 170 (860)
|.+++|+| ++.+|+++ .++.|++||+.+++. ...+ .+...+.++.|+|.+ .++++++.|+.|++||+
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT-------ADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEE-------EEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc-------ceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 99999999 77788888 689999999998762 3444 378889999999854 59999999999999999
Q ss_pred cccccCcccccceEeecCCCcEEEEEEccCCCCCccce-EEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCccee
Q 038577 171 KEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNR-IYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRV 249 (860)
Q Consensus 171 ~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~-l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (860)
.++ .....+.+|...|.+++|+|++. + +++++.||.|++||+................
T Consensus 174 ~~~------~~~~~~~~~~~~v~~~~~~~~~~-----~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---------- 232 (408)
T 4a11_B 174 KSG------SCSHILQGHRQEILAVSWSPRYD-----YILATASADSRVKLWDVRRASGCLITLDQHNGK---------- 232 (408)
T ss_dssp SSS------CCCEEECCCCSCEEEEEECSSCT-----TEEEEEETTSCEEEEETTCSSCCSEECCTTTTC----------
T ss_pred CCc------ceeeeecCCCCcEEEEEECCCCC-----cEEEEEcCCCcEEEEECCCCCcccccccccccc----------
Confidence 987 56788899999999999999998 5 8899999999999998754321111000000
Q ss_pred eeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecC-----ceeEEEEEeeCCCEEEEE
Q 038577 250 KKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISR-----EKITTAVFNELGNWLVFG 324 (860)
Q Consensus 250 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~-----~~i~~~~~s~~~~~l~~~ 324 (860)
...........+...|.+++|+|+++++++++.||.|++||+.+++.......+. ..+........+..++++
T Consensus 233 --~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (408)
T 4a11_B 233 --KSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV 310 (408)
T ss_dssp --SCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE
T ss_pred --cceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEE
Confidence 0000122335678899999999999999999999999999999877654433221 122222223334555555
Q ss_pred EccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEee-CC
Q 038577 325 CAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA-NN 403 (860)
Q Consensus 325 ~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~-~~ 403 (860)
+.+ +.+++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|++.+++.+.....+... ..+.+ ..
T Consensus 311 ~~~-~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~ 386 (408)
T 4a11_B 311 PYG-STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFE 386 (408)
T ss_dssp EET-TEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------
T ss_pred ecC-CEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccc
Confidence 554 99999999999999999999999999999999999999999999999999998877655433222 22333 33
Q ss_pred CEEEEEeCCCcEEEEEccc
Q 038577 404 HSLLSASLDGTVRAWDLFR 422 (860)
Q Consensus 404 ~~l~s~~~dg~i~~wd~~~ 422 (860)
..+.+.+.++.+++|+...
T Consensus 387 ~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 387 DAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp -------------------
T ss_pred eeecccCccCceeecCCcc
Confidence 4556777899999998643
No 77
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-35 Score=315.78 Aligned_cols=306 Identities=15% Similarity=0.146 Sum_probs=238.8
Q ss_pred EEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc--eEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 038577 301 LLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE--SYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTV 378 (860)
Q Consensus 301 ~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 378 (860)
....+...|.+++|+|+|+++++++.+ +.|++||+.++ +....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTAT-NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSS-SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCC-CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 345567799999999999999887665 99999999988 677777899999999999999999999999999999999
Q ss_pred CCCe---eEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccce---eeEeeCCCCCcEEEEEECCCCCEEEEE
Q 038577 379 SSGF---CFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRN---FRTFTTPSSRQFVSLASDQSGEVICAG 452 (860)
Q Consensus 379 ~~~~---~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~ 452 (860)
.++. ....+..|...|.+++|+|++++|++++.|+.|++||+.+++. ...+..++...+.+++++|++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9877 6777888999999999999999999999999999999998773 666666577899999999999999999
Q ss_pred ecCCCeEEEEECC------------------CCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcc---
Q 038577 453 TLDSFEIFVWSMK------------------TGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKG--- 511 (860)
Q Consensus 453 ~~~~~~i~v~d~~------------------~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~--- 511 (860)
+.|+ .|++||+. .++.+..+ +|.+.|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 165 ~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 165 CADR-KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp ESSS-CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEE
T ss_pred eCCC-EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcce
Confidence 9998 99999985 35566667 8999999999999999999999999999999999887
Q ss_pred -eeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc--eeEEEecccccCC-----------Ccccc-------
Q 038577 512 -SVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGE--LMYTIEGRRDISG-----------GRLMT------- 570 (860)
Q Consensus 512 -~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~-----------~~~~~------- 570 (860)
...+..|...|.+++|+|++++|++++.++.+ +|+..... ....+........ .....
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALR 321 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccc
Confidence 56677899999999999999999999877766 66655322 1111211111000 00000
Q ss_pred ------------ccccccccCCCCcEEEEEEecCC-C---EEEEecCCCeEEEEEC
Q 038577 571 ------------DRRSAANSSSGKCFTTLCYSADG-S---YILAGGSSKYICMYDV 610 (860)
Q Consensus 571 ------------~~~~~~~~~~~~~i~~l~~s~~g-~---~l~~~~~dg~v~vwd~ 610 (860)
.........|...|+++++.++. . .|++++.||.|++||+
T Consensus 322 ~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 322 STFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00111223478899999976544 3 6999999999999985
No 78
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=317.89 Aligned_cols=317 Identities=11% Similarity=0.069 Sum_probs=256.0
Q ss_pred ecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCC
Q 038577 186 LGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPS 265 (860)
Q Consensus 186 ~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (860)
+.-...|.+++|+|||+ ++++++.|++|+ |.... ..+.+|..
T Consensus 12 ~~~~~~v~sv~~SpDG~-----~iASas~D~TV~--d~~~~-------------------------------~~l~gh~~ 53 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGT-----LYLTTFPDISIG--QPKYA-------------------------------KDINCNSK 53 (588)
T ss_dssp CCCSSSSCCEEECTTSC-----EEEECSSSEEEE--EECCC-------------------------------SCCSSBGG
T ss_pred hHhhccEEEEEECCCCC-----EEEEEcCCceee--ccccc-------------------------------ceecCCCc
Confidence 34567899999999999 999999999999 64432 22257888
Q ss_pred ceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe
Q 038577 266 KVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ 345 (860)
Q Consensus 266 ~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~ 345 (860)
.|.+++|+|+| .++.+.+|+.... ....+ .+...|.+++|||+|..+++++.+ |.+++||.+. .+..+
T Consensus 54 ~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~~~-~~~~~V~~vawSPdG~~LAs~s~d-g~V~iwd~~~--~l~~l 121 (588)
T 2j04_A 54 NLFHVKEFPLE-------FENKLDFELAQQN-GLLNS-QPVCYPRVCKPSPIDDWMAVLSNN-GNVSVFKDNK--MLTNL 121 (588)
T ss_dssp GTEEEEEECCC-------CCCTTTTSCCCSS-CSSTT-SCSCCEEEEEECSSSSCEEEEETT-SCEEEEETTE--EEEEC
T ss_pred cEEEEEECCCC-------CcceEEEEeCCCc-eEeec-CCCCcEEEEEECCCCCEEEEEeCC-CcEEEEeCCc--eeeec
Confidence 99999999998 4555555544221 22222 336789999999999999999877 9999999544 55555
Q ss_pred cCccc-----CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-------eEEEe----ecCCCceEEEEEeeCCCEEEEE
Q 038577 346 QGHYF-----DVNCLAYSPDSQLLATGADDNKVKVWTVSSGF-------CFVTF----TEHTNAVTALHFMANNHSLLSA 409 (860)
Q Consensus 346 ~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~----~~~~~~v~~i~~~~~~~~l~s~ 409 (860)
. |.. .+.+++|||||++||+|+.||+|++||+.++. .+.++ .+|...|.+++|+|+| ++++
T Consensus 122 ~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laas 198 (588)
T 2j04_A 122 D-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAA 198 (588)
T ss_dssp C-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEE
T ss_pred c-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEE
Confidence 5 665 49999999999999999999999999999875 35666 6677899999999999 8899
Q ss_pred eCCCcEEEEEcccccee---eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEE-
Q 038577 410 SLDGTVRAWDLFRYRNF---RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVF- 485 (860)
Q Consensus 410 ~~dg~i~~wd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~- 485 (860)
+.|+++++||+.+.... +.+...+...|.+++|+ |..+++++ ++ .|++||+.+++......+|...|.+++|
T Consensus 199 s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~-tIkLWd~~~~~~~~~~~gh~~~V~~va~~ 274 (588)
T 2j04_A 199 LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG-YVHKIDLKNYSISSLKTGSLENFHIIPLN 274 (588)
T ss_dssp ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS-EEEEEETTTTEEEEEECSCCSCCCEEEET
T ss_pred eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC-eEEEEECCCCeEEEEEcCCCceEEEEEee
Confidence 99999999999887742 44544566789999999 68888887 45 9999999988875555489999999999
Q ss_pred -cCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccC
Q 038577 486 -SPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDIS 564 (860)
Q Consensus 486 -s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 564 (860)
+|++..+++++.||+ ++|... .++++||+..+++. |+++++|+...+. +..+.+ ..
T Consensus 275 ~s~d~~~La~a~edG~-klw~~d----------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~-- 331 (588)
T 2j04_A 275 HEKESTILLMSNKTSY-KVLLED----------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TL-- 331 (588)
T ss_dssp TCSSCEEEEECSSCEE-EEEESS----------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EE--
T ss_pred eCCCCCEEEEEcCCCC-EEEeec----------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ce--
Confidence 999999999999999 999986 26699999988775 9999999985443 334444 21
Q ss_pred CCccccccccccccCCCCcEEEEEEecCCCEEEEec
Q 038577 565 GGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG 600 (860)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~ 600 (860)
.|.+++|||||+.+|+++
T Consensus 332 ------------------~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 332 ------------------VIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp ------------------EEEEEEECTTSSEEEEEE
T ss_pred ------------------EEEEEEECCCCCEEEEEE
Confidence 489999999999999886
No 79
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.1e-34 Score=303.88 Aligned_cols=283 Identities=18% Similarity=0.191 Sum_probs=241.3
Q ss_pred cccCCCCceEEEEecCCC-CEEEEEEcCCeEEEEECCCceeEEEEe--ecCceeEEEEEee-CCCEEEEEEccCCcEEEE
Q 038577 259 DFSQAPSKVTACDYHRGL-DMVVVGFSNGVFGLYQMPDFVCIHLLS--ISREKITTAVFNE-LGNWLVFGCAKLGQLLVW 334 (860)
Q Consensus 259 ~~~~~~~~v~~~~~~~~~-~~l~~~~~~g~i~~~~~~~~~~~~~~~--~~~~~i~~~~~s~-~~~~l~~~~~~~g~i~v~ 334 (860)
.+.+|...|.+++|+|++ +++++|+.||.|++||+.+++....+. .+...|.+++|+| +++.+++++.+ +.|++|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-GATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-TEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-CEEEEE
Confidence 456788999999999999 999999999999999999888877766 5888999999999 56777776655 999999
Q ss_pred EccCceEEEEec---CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCC-EEEEEe
Q 038577 335 EWRSESYILKQQ---GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNH-SLLSAS 410 (860)
Q Consensus 335 d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~ 410 (860)
|+.+.. ...+. .|...|.+++|+|++++|++++.||.|++||+ +++.+..+..|...|.+++|+|+++ .+++++
T Consensus 147 d~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 224 (383)
T 3ei3_B 147 DFSGSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSS 224 (383)
T ss_dssp ETTSCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEE
T ss_pred ECCCCc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEe
Confidence 999644 44443 34478999999999999999999999999999 5788889999999999999999998 899999
Q ss_pred CCCcEEEEEccc----cceeeEeeCCCCCcEEEEEECC-CCCEEEEEecCCCeEEEEECCCCceEEEecCcc--------
Q 038577 411 LDGTVRAWDLFR----YRNFRTFTTPSSRQFVSLASDQ-SGEVICAGTLDSFEIFVWSMKTGRLLDILSGHE-------- 477 (860)
Q Consensus 411 ~dg~i~~wd~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-------- 477 (860)
.|+.|++||+.+ ......+ .+...+.+++|+| ++.++++++.|+ .|++||+++++....+.+|.
T Consensus 225 ~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 225 VDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRN-EIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp TTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSS-EEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred CCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCC-cEEEEECCCCcccccccccccccccccc
Confidence 999999999998 5555555 3567899999999 999999999998 99999999988776666543
Q ss_pred ---------cCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc--cCCCeEEEEEeeCCCEEEEEeCCCeEEEE
Q 038577 478 ---------GPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP--HTHDVLTVVYRPDGRQLACSTLDGQIHFW 546 (860)
Q Consensus 478 ---------~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 546 (860)
+.+..++|+|++++ +++.||.|++||+.+++....+.. +...+..++|+|++++|++++ ||.|++|
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw 378 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIW 378 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEE
T ss_pred ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEE
Confidence 33445666777766 777899999999999987777765 567788889999999999997 9999999
Q ss_pred eCCC
Q 038577 547 DPLN 550 (860)
Q Consensus 547 d~~~ 550 (860)
|+++
T Consensus 379 ~~~~ 382 (383)
T 3ei3_B 379 NRED 382 (383)
T ss_dssp ECC-
T ss_pred ecCC
Confidence 9864
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-34 Score=303.78 Aligned_cols=284 Identities=19% Similarity=0.272 Sum_probs=238.9
Q ss_pred eEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 038577 309 ITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQG-HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 309 i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 387 (860)
+.++.|+ +..+++++.+ +.|++||+.+++....... |...|.+++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 96 ~~~~~~s--~~~l~~~~~d-~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 96 LNLLDWS--NLNVVAVALE-RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTM 172 (401)
T ss_dssp CBCEEEC--TTSEEEEEET-TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEEeec--CCCEEEEECC-CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEe
Confidence 3445555 4567766655 9999999999988777755 7889999999999999999999999999999999999999
Q ss_pred ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC
Q 038577 388 TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG 467 (860)
Q Consensus 388 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~ 467 (860)
..|...|.+++|+ ++.+++++.||.|++||+............+...+.+++++|++.++++++.|+ .|++||++++
T Consensus 173 ~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~v~iwd~~~~ 249 (401)
T 4aez_A 173 AGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN-VVQIWDARSS 249 (401)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTCS
T ss_pred cCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-eEEEccCCCC
Confidence 9999999999994 569999999999999999854443333344567899999999999999999998 9999999999
Q ss_pred ceEEEecCcccCeEEEEEcCCC-CEEEEEe--CCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEe--CCCe
Q 038577 468 RLLDILSGHEGPVHGLVFSPTN-ATLASSS--WDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACST--LDGQ 542 (860)
Q Consensus 468 ~~~~~~~~h~~~v~~l~~s~~~-~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~ 542 (860)
+.+..+.+|...|.+++|+|++ .++++++ .|+.|++||+.+++.... ..+...+.+++|+|+++++++++ .||.
T Consensus 250 ~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 250 IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT-VDAGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE-EECSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE-EeCCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 9999999999999999999976 4566655 799999999999875444 45778899999999999999954 8999
Q ss_pred EEEEeCCCCceeEE--EecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEE
Q 038577 543 IHFWDPLNGELMYT--IEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRF 619 (860)
Q Consensus 543 i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~ 619 (860)
|++||+.+++.... +.+|.. .|.+++|+|+|++|++++.||.|++|++.+++.+...
T Consensus 329 i~v~~~~~~~~~~~~~~~~h~~--------------------~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 329 LSIWSYSSSGLTKQVDIPAHDT--------------------RVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEEEEETTEEEEEEEEECCSS--------------------CCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred EEEEecCCccceeEEEecCCCC--------------------CEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 99999998765554 445543 5999999999999999999999999999999877644
No 81
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-33 Score=302.77 Aligned_cols=300 Identities=16% Similarity=0.217 Sum_probs=234.8
Q ss_pred CcEEEeCCCEEEeeeCCeEEEEECCCCcEEeec--cCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-c
Q 038577 16 GNAVLSQNTKLISPVGNRVSVTDLIKSKTVTLP--VESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-F 92 (860)
Q Consensus 16 ~~~~~sdg~~l~~~~~~~i~v~d~~~~~~~~~~--~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~ 92 (860)
..++||.++.||+|.|++|+|||+.+|+....+ .+|...|++++|+|||++||+|+.||.|+|||+.+++.++.+. |
T Consensus 109 ~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h 188 (420)
T 4gga_A 109 NLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSH 188 (420)
T ss_dssp BCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCC
Confidence 458899445999999999999999999986554 4678889999999999999999999999999999999999887 8
Q ss_pred CCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeec
Q 038577 93 KYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVK 171 (860)
Q Consensus 93 ~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~ 171 (860)
...+.++++ ++.+|+++ .++.+++||...... .+..+.+|...+..+.|+|+++++++++.|+.+++|+..
T Consensus 189 ~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~~~------~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 189 SARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEH------HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp SSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSC------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred CCceEEEee--CCCEEEEEeCCCceeEeeecccce------eeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 888888877 56788888 789999999987664 567889999999999999999999999999999999998
Q ss_pred ccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeee
Q 038577 172 EKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKK 251 (860)
Q Consensus 172 ~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (860)
.+ +. ..........|.+.|.+++|+|++.. .++++
T Consensus 261 ~~-~~-~~~~~~~~~~~~~~V~~~~~~p~~~~----~la~~--------------------------------------- 295 (420)
T 4gga_A 261 PG-EG-GWVPLQTFTQHQGAVKAVAWCPWQSN----VLATG--------------------------------------- 295 (420)
T ss_dssp CC-SS-CSCCSEEECCCSSCEEEEEECTTCTT----EEEEE---------------------------------------
T ss_pred cc-cc-cceeeeeecccCCceeeeeeCCCccc----EEEEE---------------------------------------
Confidence 76 11 11234556667777777777776551 22222
Q ss_pred EEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEc-cCCc
Q 038577 252 WGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCA-KLGQ 330 (860)
Q Consensus 252 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-~~g~ 330 (860)
.|+.|+.|++||+.+++....+..+ ..+.++.|+++++.++++++ .++.
T Consensus 296 -----------------------------~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 296 -----------------------------GGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp -----------------------------ECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCC
T ss_pred -----------------------------eecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCE
Confidence 1224555555665555555555544 46788899999999988764 5699
Q ss_pred EEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEE
Q 038577 331 LLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALH 398 (860)
Q Consensus 331 i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~ 398 (860)
|++||+.+++.+..+.+|...|.+++|+|+|++|++|+.|++|++||+.+..+......+...+....
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s 413 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSS 413 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--------------
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccc
Confidence 99999999999999999999999999999999999999999999999987666555555544443333
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.7e-34 Score=302.26 Aligned_cols=305 Identities=11% Similarity=0.044 Sum_probs=230.0
Q ss_pred CCCcEEEEEEccCCCCCccceEEEEcCCc-------cEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccc
Q 038577 188 HRDSVVGCFFSVDKKTDKVNRIYTIARDC-------YMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDF 260 (860)
Q Consensus 188 h~~~i~~~~~~~~~~~~~~~~l~s~~~dg-------~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (860)
-..+|.+++|+||++ +|++|+.+. .|++|++........ ..........+
T Consensus 13 ~g~PV~sv~fs~dg~-----~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~------------------~~~~~~~~~~l 69 (365)
T 4h5i_A 13 VGYPAYGAKFLNNDT-----LLVAGGGGEGNNGIPNKLTVLRVDPTKDTEK------------------EQFHILSEFAL 69 (365)
T ss_dssp CSSCEEEEEEEETTE-----EEEEEECCSSSSSCCEEEEEEEECTTSSSHH------------------HHEEEEEEEEC
T ss_pred CCCCEEEEEEeCCCc-----EEEEECCCccccCCCCEEEEEEEcCCCccee------------------eeeeeeeEEEc
Confidence 346899999999999 999987543 599999986532100 01111222345
Q ss_pred cCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce
Q 038577 261 SQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES 340 (860)
Q Consensus 261 ~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~ 340 (860)
..+...+.++++ +++.+++|..++...+|+.. .++.+++|++....
T Consensus 70 ~~~~~~v~s~~~--~~~~~~~g~~~~~~~l~s~~--------------------------------~d~~~r~~~~~~~~ 115 (365)
T 4h5i_A 70 EDNDDSPTAIDA--SKGIILVGCNENSTKITQGK--------------------------------GNKHLRKFKYDKVN 115 (365)
T ss_dssp CTTSCCCCEEEE--ETTEEEEECCCCHHHHHHTS--------------------------------CCCCEEEEEEETTT
T ss_pred cCCCCceEEEEe--CCCEEEEEECCCccEEEEec--------------------------------CCCcEEEEEecCCC
Confidence 566667776654 45677777655444443321 12445555544321
Q ss_pred EE----EEe-----cCcccCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEE
Q 038577 341 YI----LKQ-----QGHYFDVNCLAYSPDSQLLATGA--DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSA 409 (860)
Q Consensus 341 ~~----~~~-----~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~ 409 (860)
.. ... ..+...+.+++|+|||+++++++ .|++|++||+.+++.+..+. |...|.+++|+|+|++++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~ 194 (365)
T 4h5i_A 116 DQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYI 194 (365)
T ss_dssp TEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEE
T ss_pred ceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEec
Confidence 11 111 23445688999999999987654 68999999999999998885 78889999999999999998
Q ss_pred eCCCcEEEEEccccceeeE-eeCCCCCcEEEEEECCCCCEEEEEecCCC---eEEEEECCCCce----EEEecCcccCeE
Q 038577 410 SLDGTVRAWDLFRYRNFRT-FTTPSSRQFVSLASDQSGEVICAGTLDSF---EIFVWSMKTGRL----LDILSGHEGPVH 481 (860)
Q Consensus 410 ~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~i~v~d~~~~~~----~~~~~~h~~~v~ 481 (860)
+.+ .+++|+..+++.... ....+...+.+++|+|++.++++++.++. .+++|++..+.. ...+.+|..+|+
T Consensus 195 s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 195 TGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp CSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred cce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 855 567777777665543 34456667999999999999999987763 688898876643 356788999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEE-cccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q 038577 482 GLVFSPTNATLASSSWDKTVRLWNVFEGKGSVES-FPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNG 551 (860)
Q Consensus 482 ~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 551 (860)
+++|+|||++||+|+.|++|+|||+.+++.+..+ .+|...|++++|||||++||+++.|++|+|||+...
T Consensus 274 ~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred eEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999999999999999999999877765 479999999999999999999999999999999653
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=7.6e-36 Score=322.07 Aligned_cols=309 Identities=19% Similarity=0.251 Sum_probs=242.3
Q ss_pred EEEeeccCCCeEEEEEcC-CCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEcc-CCCCCccceEEE
Q 038577 134 IRTLADCNDKVTALNWSP-DSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSV-DKKTDKVNRIYT 211 (860)
Q Consensus 134 ~~~~~~h~~~v~~l~~s~-d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~~~~~~l~s 211 (860)
.....+|...|++++|+| ++++||+|+.||.|+|||+..+ .. .....+.+|.+.|.+++|+| ++. +|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~-~~---~~~~~~~gH~~~V~~l~f~p~~~~-----~l~s 182 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIK-DK---PTFIKGIGAGGSITGLKFNPLNTN-----QFYA 182 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCC-SC---CEEECCCSSSCCCCEEEECSSCTT-----EEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCC-Cc---eeEEEccCCCCCEEEEEEeCCCCC-----EEEE
Confidence 345678999999999999 5679999999999999999876 22 23445678999999999998 567 9999
Q ss_pred EcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEE
Q 038577 212 IARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLY 291 (860)
Q Consensus 212 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~ 291 (860)
++.||+|++||++++.. . .......+...+.+++|+|++.++++|+.||.|++|
T Consensus 183 ~s~D~~v~iwd~~~~~~------------------------~--~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNIL------------------------R--VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp ECSSSCEEEEETTSCEE------------------------E--EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EeCCCEEEEeeccCCce------------------------e--EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 99999999999876321 1 111122334567899999999999999999999999
Q ss_pred ECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEE---ecCcccCeEEEEEcCCCCEEEEEe
Q 038577 292 QMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILK---QQGHYFDVNCLAYSPDSQLLATGA 368 (860)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~ 368 (860)
|+. ++.+..+..|...|.+++|+|++..++++++.|+.|++||+++...... ..+|...|++++|+|+|++|++++
T Consensus 237 d~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 237 NMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp ESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred ccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 995 5667778889999999999999987776666679999999987654332 357899999999999999999999
Q ss_pred CCCcEEEEECCCCeeEEEeecCCCc------eEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEE
Q 038577 369 DDNKVKVWTVSSGFCFVTFTEHTNA------VTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLAS 442 (860)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~~~------v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~ 442 (860)
.||.|++||+.++.....+..|... +....|+|++..+++++
T Consensus 316 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 363 (435)
T 4e54_B 316 QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGR-------------------------------- 363 (435)
T ss_dssp SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEEC--------------------------------
T ss_pred CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEE--------------------------------
Confidence 9999999999999888877766532 23345555555554443
Q ss_pred CCCCCEEEEEecCCCeEEEEECCCCceEEEec-CcccCeEEE-EEcCCCCEEEEEeCCCcEEEEEccCCcc
Q 038577 443 DQSGEVICAGTLDSFEIFVWSMKTGRLLDILS-GHEGPVHGL-VFSPTNATLASSSWDKTVRLWNVFEGKG 511 (860)
Q Consensus 443 ~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~l-~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 511 (860)
++++..++++..+++.|++||..+++.+..+. +|...|.++ +|+|+|++|++|+ |+.|+||++++++.
T Consensus 364 ~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 364 YPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp CCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred cCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 33444444444454489999999999988764 688888887 6999999999876 88999999988763
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.2e-34 Score=300.42 Aligned_cols=291 Identities=15% Similarity=0.228 Sum_probs=238.9
Q ss_pred cCCceeEEEECCCCCEEE-EE-e---CCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCC---CCeEEEeecCC
Q 038577 92 FKYPVNAILFSPNGKYIA-VG-T---GKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPD---SNYLLVGSKDL 163 (860)
Q Consensus 92 ~~~~v~~~~fspdg~~la-~~-~---~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d---~~~l~s~~~dg 163 (860)
|...|.+++|+|++..++ ++ . ++.|++||+.+++. ......+|...|.+++|+|+ +++|++++.||
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL------KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE------EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc------cceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 899999999999996555 44 2 89999999998763 12333479999999999999 69999999999
Q ss_pred eEEEEeecccccCcccc-cceEeecCCCcEEEEEE------ccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCC
Q 038577 164 AVRLFYVKEKLKGIHTN-KPFLLLGHRDSVVGCFF------SVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMED 236 (860)
Q Consensus 164 ~v~vwd~~~~~~~~~~~-~~~~~~~h~~~i~~~~~------~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~ 236 (860)
.|++||+.++ . ....+.+|...|.++.| +|++. +|++++.||.|++||+..+....
T Consensus 91 ~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-----~l~~~~~d~~i~vwd~~~~~~~~------ 153 (357)
T 3i2n_A 91 NLHIWNLEAP------EMPVYSVKGHKEIINAIDGIGGLGIGEGAP-----EIVTGSRDGTVKVWDPRQKDDPV------ 153 (357)
T ss_dssp CEEEECTTSC------SSCSEEECCCSSCEEEEEEESGGGCC-CCC-----EEEEEETTSCEEEECTTSCSSCS------
T ss_pred eEEEEeCCCC------CccEEEEEecccceEEEeeccccccCCCcc-----EEEEEeCCCeEEEEeCCCCCCcc------
Confidence 9999999987 3 57788899999999955 67888 99999999999999998754200
Q ss_pred CCCCCCCCCcceeeeEEeeeeccccCCCCceEEEE----ecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEE
Q 038577 237 SEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACD----YHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTA 312 (860)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~ 312 (860)
..+ ..........+.+++ |+|+++++++++.+|.|++||+.+++.... ..+...+.++
T Consensus 154 -------------~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~ 215 (357)
T 3i2n_A 154 -------------ANM----EPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSL 215 (357)
T ss_dssp -------------EEE----CCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEE
T ss_pred -------------eec----cccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEE
Confidence 000 000111234788888 789999999999999999999998887544 5677899999
Q ss_pred EEee---CCCEEEEEEccCCcEEEEEccCceEEEEe-----cCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCC--
Q 038577 313 VFNE---LGNWLVFGCAKLGQLLVWEWRSESYILKQ-----QGHYFDVNCLAYSPDSQ-LLATGADDNKVKVWTVSSG-- 381 (860)
Q Consensus 313 ~~s~---~~~~l~~~~~~~g~i~v~d~~~~~~~~~~-----~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~-- 381 (860)
+|+| ++..+++++.+ |.|++||++++.....+ .+|...|.+++|+|++. ++++++.||.|++||+.++
T Consensus 216 ~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 294 (357)
T 3i2n_A 216 EFDRKDISMNKLVATSLE-GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQ 294 (357)
T ss_dssp EESCSSSSCCEEEEEEST-TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSC
T ss_pred EcCCCCCCCCEEEEECCC-CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcc
Confidence 9999 89999988765 99999999887654433 38999999999999998 8999999999999998753
Q ss_pred -----------------eeEEEeecCCCceEEEEEeeCCCEEE-EEeCCCcEEEEEccccc
Q 038577 382 -----------------FCFVTFTEHTNAVTALHFMANNHSLL-SASLDGTVRAWDLFRYR 424 (860)
Q Consensus 382 -----------------~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~dg~i~~wd~~~~~ 424 (860)
..+..+..|...|.+++|+|++++|+ +++.||.|++||+.+..
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 295 RSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp C--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 46778889999999999999999998 89999999999997654
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.8e-35 Score=317.69 Aligned_cols=296 Identities=14% Similarity=0.095 Sum_probs=233.9
Q ss_pred eccCCccCeeEEEEcC-CCCEEEEEcCCCcEEEEEcccCeEEEEe---ecCCceeEEEECC-CCCEEEEE-eCCeEEEEe
Q 038577 47 LPVESSSNICRIAVSP-DGTFLLTVDENQRCHFINLHCHVVLHRV---RFKYPVNAILFSP-NGKYIAVG-TGKLVQIWR 120 (860)
Q Consensus 47 ~~~~h~~~v~~va~sp-dg~~la~~~~d~~i~vwd~~~~~~~~~~---~~~~~v~~~~fsp-dg~~la~~-~~~~i~iwd 120 (860)
...+|...|+|++|+| ++++||+|+.||.|+|||+.++.....+ .|.+.|++++|+| ++.+|+++ .|+.|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 3446888999999999 5679999999999999999877544433 3899999999998 68899988 799999999
Q ss_pred CCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccC
Q 038577 121 SPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVD 200 (860)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 200 (860)
+.++.. ........+...+.+++|+|++++|++|+.||.|++||+... ....+.+|...|.+++|+|+
T Consensus 194 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-------~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 194 FKGNIL-----RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-------ELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp TTSCEE-----EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-------BCCCSBCCSSCEEEEEECTT
T ss_pred ccCCce-----eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-------eeEEEecccceEEeeeecCC
Confidence 987531 111222234456889999999999999999999999998654 45678899999999999998
Q ss_pred CCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEE
Q 038577 201 KKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVV 280 (860)
Q Consensus 201 ~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 280 (860)
+.. .+++++.|++|++||+....... ......+|...|.+++|+|++++|+
T Consensus 262 ~~~----~~~s~s~d~~v~iwd~~~~~~~~-------------------------~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 262 CDW----FLATASVDQTVKIWDLRQVRGKA-------------------------SFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp CSS----EEEEEETTSBCCEEETTTCCSSS-------------------------CCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred Cce----EEEEecCcceeeEEecccccccc-------------------------eEEEeeeccccccceeECCCCCeeE
Confidence 863 67899999999999998753310 0122346788999999999999999
Q ss_pred EEEcCCeEEEEECCCceeEEEEeecCc------eeEEEEEeeCCCEEEEEEc-----------cCCcEEEEEccCceEEE
Q 038577 281 VGFSNGVFGLYQMPDFVCIHLLSISRE------KITTAVFNELGNWLVFGCA-----------KLGQLLVWEWRSESYIL 343 (860)
Q Consensus 281 ~~~~~g~i~~~~~~~~~~~~~~~~~~~------~i~~~~~s~~~~~l~~~~~-----------~~g~i~v~d~~~~~~~~ 343 (860)
+++.||.|++||+.+++....+..+.. .+....|+|++..++++.. +++.|++||..+++.+.
T Consensus 313 s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~ 392 (435)
T 4e54_B 313 TTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMC 392 (435)
T ss_dssp EEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEE
T ss_pred EEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEE
Confidence 999999999999999888777655432 2344567777777766653 33579999999999888
Q ss_pred Eec-CcccCeEEE-EEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 038577 344 KQQ-GHYFDVNCL-AYSPDSQLLATGADDNKVKVWTVSSGFCF 384 (860)
Q Consensus 344 ~~~-~~~~~v~~~-~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 384 (860)
.+. +|...|.++ +|+|+|.+|++|+ |+.|++|++++++..
T Consensus 393 ~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 393 QLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 764 678888887 6999999999876 789999999887643
No 86
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-36 Score=313.17 Aligned_cols=318 Identities=10% Similarity=0.009 Sum_probs=252.8
Q ss_pred cCCceeEEEECCCCCEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEee
Q 038577 92 FKYPVNAILFSPNGKYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYV 170 (860)
Q Consensus 92 ~~~~v~~~~fspdg~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~ 170 (860)
....|.+++|||||+++|++ .|++|+ |...++ .+.+|...|.+++|+|+| .++.+.+|+.
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~----------~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~ 74 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAK----------DINCNSKNLFHVKEFPLE-------FENKLDFELA 74 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCS----------CCSSBGGGTEEEEEECCC-------CCCTTTTSCC
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccc----------eecCCCccEEEEEECCCC-------CcceEEEEeC
Confidence 56889999999999999999 788888 755443 337999999999999999 4566666654
Q ss_pred cccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceee
Q 038577 171 KEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVK 250 (860)
Q Consensus 171 ~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (860)
+.. ....+ +|...|.+++|+|+|. +|++++.||.+++|+.++
T Consensus 75 ~~~-------~~~~~-~~~~~V~~vawSPdG~-----~LAs~s~dg~V~iwd~~~------------------------- 116 (588)
T 2j04_A 75 QQN-------GLLNS-QPVCYPRVCKPSPIDD-----WMAVLSNNGNVSVFKDNK------------------------- 116 (588)
T ss_dssp CSS-------CSSTT-SCSCCEEEEEECSSSS-----CEEEEETTSCEEEEETTE-------------------------
T ss_pred CCc-------eEeec-CCCCcEEEEEECCCCC-----EEEEEeCCCcEEEEeCCc-------------------------
Confidence 332 12222 5588999999999999 999999999999998532
Q ss_pred eEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce-------eEEEE----eecCceeEEEEEeeCCC
Q 038577 251 KWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV-------CIHLL----SISREKITTAVFNELGN 319 (860)
Q Consensus 251 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~-------~~~~~----~~~~~~i~~~~~s~~~~ 319 (860)
.+.... ....-....+.+++|+|+|++|++|+.||.|++|++.++. .+.++ .+|...|.+++|+|+|
T Consensus 117 ~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg- 194 (588)
T 2j04_A 117 MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV- 194 (588)
T ss_dssp EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-
T ss_pred eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-
Confidence 111100 0001112369999999999999999999999999998875 35666 4456799999999999
Q ss_pred EEEEEEccCCcEEEEEccCceE---EEEe-cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceE
Q 038577 320 WLVFGCAKLGQLLVWEWRSESY---ILKQ-QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVT 395 (860)
Q Consensus 320 ~l~~~~~~~g~i~v~d~~~~~~---~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 395 (860)
+++++. |+.+++|++.++.. ...+ .+|...|.+++|+ |+.+|+++ +++|++||+.++.......+|...|.
T Consensus 195 -Laass~-D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~ 269 (588)
T 2j04_A 195 -LVAALS-NNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFH 269 (588)
T ss_dssp -EEEEET-TCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCC
T ss_pred -EEEEeC-CCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEE
Confidence 666655 49999999988773 3455 4788899999999 68999987 69999999998887554548999999
Q ss_pred EEEE--eeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEe
Q 038577 396 ALHF--MANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDIL 473 (860)
Q Consensus 396 ~i~~--~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~ 473 (860)
++.| +|++..+++++.||+ ++|... .+.++|++..++.. ++ ++++|+...+. ...+
T Consensus 270 ~va~~~s~d~~~La~a~edG~-klw~~d-----------------~~~~spd~~l~a~~--d~-~v~lW~~~g~~-l~~~ 327 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSY-KVLLED-----------------ELHVTADNIIAPYL--EK-KFKKWSTIWNE-FNNY 327 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEE-EEEESS-----------------SEEEECCCSSHHHH--HH-HHHHTTTTTTS-SSSS
T ss_pred EEEeeeCCCCCEEEEEcCCCC-EEEeec-----------------cEEECCCceEEEEc--CC-EEEEEECCCCc-eeee
Confidence 9999 999999999999999 999975 25589999888775 55 89999986554 3355
Q ss_pred cCcccCeEEEEEcCCCCEEEEEe
Q 038577 474 SGHEGPVHGLVFSPTNATLASSS 496 (860)
Q Consensus 474 ~~h~~~v~~l~~s~~~~~l~s~~ 496 (860)
.+ ...|.+++|||||+.+|+++
T Consensus 328 ~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 328 ET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CC-EEEEEEEEECTTSSEEEEEE
T ss_pred cc-ceEEEEEEECCCCCEEEEEE
Confidence 54 77799999999999999886
No 87
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.9e-33 Score=300.55 Aligned_cols=283 Identities=18% Similarity=0.312 Sum_probs=242.7
Q ss_pred eeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe--cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 038577 308 KITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ--QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFV 385 (860)
Q Consensus 308 ~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 385 (860)
....++|+++ +.|+++. |++|++||..+++....+ .+|...|++++|+|+|++|++|+.||.|++||+.+++.+.
T Consensus 107 y~~~l~wS~~-n~lAvgl--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEECTT-SEEEEEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEECCC-CEEEEEe--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 3567899975 4666654 499999999999877655 4677889999999999999999999999999999999999
Q ss_pred EeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECC
Q 038577 386 TFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMK 465 (860)
Q Consensus 386 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~ 465 (860)
.+.+|...+.++.++ +..+++++.|+.+++||.............+...+..+.++|++.++++++.|+ .+++|+..
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~-~v~i~~~~ 260 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-LVNVWPSA 260 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEESS
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccc-cceEEeec
Confidence 999999999988774 669999999999999999876655544455667899999999999999999999 99999998
Q ss_pred CCc----eEEEecCcccCeEEEEEcCCC-CEEEEE--eCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEe
Q 038577 466 TGR----LLDILSGHEGPVHGLVFSPTN-ATLASS--SWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACST 538 (860)
Q Consensus 466 ~~~----~~~~~~~h~~~v~~l~~s~~~-~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 538 (860)
+++ .+.....|...|.+++|+|++ ..++++ +.|++|++||+.+++.... ..+...+.++.|+|+++.+++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~-~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE-EECSSCEEEEEEETTTTEEEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee-eccccceeeeeecCCCCeEEEEE
Confidence 765 356777899999999999975 455554 4799999999999875544 44557899999999999998875
Q ss_pred --CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEE
Q 038577 539 --LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLL 616 (860)
Q Consensus 539 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~ 616 (860)
.||.|+|||+.+++++..+.+|.. .|++++|+|||++|++|+.|++|++||+.+....
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~--------------------~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTS--------------------RVLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSS--------------------CEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCC--------------------CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 689999999999999999999875 5999999999999999999999999999776544
Q ss_pred E
Q 038577 617 R 617 (860)
Q Consensus 617 ~ 617 (860)
+
T Consensus 400 ~ 400 (420)
T 4gga_A 400 R 400 (420)
T ss_dssp -
T ss_pred c
Confidence 3
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.3e-33 Score=285.47 Aligned_cols=248 Identities=17% Similarity=0.199 Sum_probs=209.5
Q ss_pred EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC--CeeEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEEEEE
Q 038577 344 KQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSS--GFCFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVRAWD 419 (860)
Q Consensus 344 ~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~~wd 419 (860)
.+.+|...|.+++|+|+|++|++|+.|++|++||+.. .+.+..+.+|.++|.+++|+++ +++|++++.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4578999999999999999999999999999999974 4677889999999999999864 88999999999999999
Q ss_pred ccccce--eeEeeCCCCCcEEEEEECCC--CCEEEEEecCCCeEEEEECCCCc--eEEEecCcccCeEEEEEcCC-----
Q 038577 420 LFRYRN--FRTFTTPSSRQFVSLASDQS--GEVICAGTLDSFEIFVWSMKTGR--LLDILSGHEGPVHGLVFSPT----- 488 (860)
Q Consensus 420 ~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~v~d~~~~~--~~~~~~~h~~~v~~l~~s~~----- 488 (860)
+.+++. ...+ ..+...+.+++|+|+ +.++++++.|+ .|++||++++. ....+.+|...|.+++|+|+
T Consensus 84 ~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~g~~l~s~s~d~-~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 84 EENGRWSQIAVH-AVHSASVNSVQWAPHEYGPMLLVASSDG-KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp BSSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred cCCCceEEEEEe-ecCCCceeEEEeCcCCCCcEEEEEECCC-cEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 987642 2233 345568999999998 89999999999 99999998763 24667889999999999997
Q ss_pred --------CCEEEEEeCCCcEEEEEccCCc----ceeEEcccCCCeEEEEEeeCC---CEEEEEeCCCeEEEEeCCCCce
Q 038577 489 --------NATLASSSWDKTVRLWNVFEGK----GSVESFPHTHDVLTVVYRPDG---RQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 489 --------~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
+++|++++.|++|++||+.++. ....+.+|...|.+++|+|++ .+|++++.|++|++||+.++..
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 5799999999999999998765 334566899999999999985 8999999999999999876531
Q ss_pred --e-EEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECC
Q 038577 554 --M-YTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 554 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~ 611 (860)
. ..+.. ..+...|.+++|+|+|++|++++.||.|++|+..
T Consensus 242 ~~~~~~~~~------------------~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 242 PWKKTLLKE------------------EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCEEEESSS------------------SCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ccceeeeec------------------ccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 1 11110 0122469999999999999999999999999976
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=305.09 Aligned_cols=329 Identities=15% Similarity=0.228 Sum_probs=242.6
Q ss_pred CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe-----------eEEEeecCC------------CceEEEEEeeCC
Q 038577 347 GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF-----------CFVTFTEHT------------NAVTALHFMANN 403 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~~~------------~~v~~i~~~~~~ 403 (860)
.+...|.+++|+|+|++|++|+.||.|++|++.++. ....+.+|. ..|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 357889999999999999999999999999998876 577888998 889999999998
Q ss_pred --CEEEEEeCCCcEEEEEcccccee---------------------------------------eEeeCCCCCcEEEEEE
Q 038577 404 --HSLLSASLDGTVRAWDLFRYRNF---------------------------------------RTFTTPSSRQFVSLAS 442 (860)
Q Consensus 404 --~~l~s~~~dg~i~~wd~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~ 442 (860)
..+++++.|+.|++||+.+.... +.+...+...+.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999999764432 1333456778999999
Q ss_pred CCCCCEEEEEecCCCeEEEEECCC-CceEE-------EecCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEEccCCcc--
Q 038577 443 DQSGEVICAGTLDSFEIFVWSMKT-GRLLD-------ILSGHEGPVHGLVFSPTN-ATLASSSWDKTVRLWNVFEGKG-- 511 (860)
Q Consensus 443 ~~~~~~l~~~~~~~~~i~v~d~~~-~~~~~-------~~~~h~~~v~~l~~s~~~-~~l~s~~~dg~i~iwd~~~~~~-- 511 (860)
+|++++++++ .|+ .|++||+++ ++... .+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.
T Consensus 186 ~~~~~~l~s~-~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDYETYLSA-DDL-RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CTTSSEEEEE-CSS-EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cCCCCEEEEe-CCC-eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 9999999998 677 999999994 44444 256899999999999998 9999999999999999998875
Q ss_pred --eeEEcccCC------------CeEEEEEeeCCCEEEEEeCCCeEEEEeCCC-CceeEEEecccccCCCcccccccccc
Q 038577 512 --SVESFPHTH------------DVLTVVYRPDGRQLACSTLDGQIHFWDPLN-GELMYTIEGRRDISGGRLMTDRRSAA 576 (860)
Q Consensus 512 --~~~~~~~~~------------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (860)
...+..|.. .|.+++|+|+|++|++++. +.|++||+.+ ++++..+.+|.......... .
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~-----~ 337 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSL-----Y 337 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHH-----H
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccc-----c
Confidence 455556665 8999999999999999998 9999999997 88888888876421100000 0
Q ss_pred ccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecccccccceeeeccCCCCCCCCCCccccCCCCCcc
Q 038577 577 NSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITHNLSLDGVIDFLNSKNMTEAGPMDLIDDDNSDTE 656 (860)
Q Consensus 577 ~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (860)
....-..+..++|+|+|++|++++.||.|++||+.+++.+. +....... ..........+...+.. ...
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~------~~~-- 406 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENN--KPRTVLKPRKVCASGKR------KKD-- 406 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTC--CTTCBCCCCCEECSSCC------CTT--
T ss_pred cccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccc--ccccccCCccccccCCc------ccc--
Confidence 00000013459999999999999999999999999998762 22221100 00000000000000000 000
Q ss_pred ccccccccCccccCCCCCCCCCCCCccceeEEEECCCCCeEEEeccccEEEEec
Q 038577 657 EGVEKQTRGKLDYDLPGALPNRGRPTIQTKCLKIAPTGRNFVAATTEGVLVYSI 710 (860)
Q Consensus 657 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~i~~~ 710 (860)
.... ........+..++++|+|..+++++.+++++|..
T Consensus 407 ---------~~~~-------~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 407 ---------EISV-------DSLDFNKKILHTAWHPKENIIAVATTNNLYIFQD 444 (447)
T ss_dssp ---------CEEG-------GGCCTTSCCCEEEECSSSSEEEEECSSCEEEEEC
T ss_pred ---------cccc-------cccccCCceeEEEECCCCCEEEEEecceeeeecc
Confidence 0000 0011223688999999999999999999998864
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.4e-33 Score=296.56 Aligned_cols=284 Identities=19% Similarity=0.314 Sum_probs=243.4
Q ss_pred eEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe
Q 038577 267 VTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ 345 (860)
Q Consensus 267 v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~ 345 (860)
+.++.|++ ..+++++.+|.|++|++.+++....+.. +...|.+++|+|+++.+++++.+ |.|++||+.+++.+..+
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~ 172 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-GLVDIYDVESQTKLRTM 172 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCEEEEE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-CeEEEEECcCCeEEEEe
Confidence 44566654 5688899999999999999998887776 67889999999999999998876 99999999999999999
Q ss_pred cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccc
Q 038577 346 QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS-SGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYR 424 (860)
Q Consensus 346 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~ 424 (860)
.+|...|.+++| ++..+++++.||.|++||+. .+.....+..|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 173 ~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 173 AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS
T ss_pred cCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC
Confidence 999999999999 46799999999999999998 567788889999999999999999999999999999999999988
Q ss_pred eeeEeeCCCCCcEEEEEECCCCCE-EEEEe--cCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEe--CCC
Q 038577 425 NFRTFTTPSSRQFVSLASDQSGEV-ICAGT--LDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSS--WDK 499 (860)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~--~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~--~dg 499 (860)
....+.. +...+.+++++|++.. +++++ .++ .|++||+.+++.+..+. +...|.+++|+|+++++++++ .||
T Consensus 251 ~~~~~~~-~~~~v~~~~~~p~~~~ll~~~~gs~d~-~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 251 PKFTKTN-HNAAVKAVAWCPWQSNLLATGGGTMDK-QIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp EEEEECC-CSSCCCEEEECTTSTTEEEEECCTTTC-EEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred ccEEecC-CcceEEEEEECCCCCCEEEEecCCCCC-EEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCC
Confidence 7777654 4557899999997754 44443 466 99999999999998886 678899999999999999954 899
Q ss_pred cEEEEEccCCccee--EEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEe
Q 038577 500 TVRLWNVFEGKGSV--ESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIE 558 (860)
Q Consensus 500 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 558 (860)
.|++||+.++.... ....|...|.+++|+|++++|++++.||.|++|++.+++.+....
T Consensus 328 ~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 328 NLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred cEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 99999999865433 355799999999999999999999999999999999998776543
No 91
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.2e-35 Score=311.00 Aligned_cols=281 Identities=15% Similarity=0.147 Sum_probs=232.5
Q ss_pred CCCceEEEEecCCCCEEEEEEcCCeEEEEECCCc--eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce
Q 038577 263 APSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDF--VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES 340 (860)
Q Consensus 263 ~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~ 340 (860)
+...|.+++|+|++++|++++.||.|++|++.++ +....+..|...|.+++|+|+++++++++.+ +.|++||+.++.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-~~v~vwd~~~~~ 88 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-RNAYVYEKRPDG 88 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-SSEEEC------
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-CeEEEEEcCCCC
Confidence 4568999999999999999999999999999888 6778888899999999999999999988876 999999999887
Q ss_pred ---EEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---eEEEeec-CCCceEEEEEeeCCCEEEEEeCCC
Q 038577 341 ---YILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF---CFVTFTE-HTNAVTALHFMANNHSLLSASLDG 413 (860)
Q Consensus 341 ---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~dg 413 (860)
....+..|...|.+++|+|++++|++++.|+.|++||+.++. ....+.. |...|.+++|+|++++|++++.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 667778899999999999999999999999999999999876 4677777 999999999999999999999999
Q ss_pred cEEEEEccc------------------cceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCce----EE
Q 038577 414 TVRAWDLFR------------------YRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRL----LD 471 (860)
Q Consensus 414 ~i~~wd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~----~~ 471 (860)
.|++||+.. ++....+ .+...+.+++|+|+++++++++.|+ .|++||+.+++. +.
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDS-SVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTT-EEC-CEECSTTSCEEECC
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCC-cEEEEECCCCCCcceeeE
Confidence 999999852 3344444 6667899999999999999999998 999999999987 78
Q ss_pred EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc-c--------------------------e---------eE-
Q 038577 472 ILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGK-G--------------------------S---------VE- 514 (860)
Q Consensus 472 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~-~--------------------------~---------~~- 514 (860)
.+.+|..+|.+++|+|++++|++++.++.+ +|+..... . . ..
T Consensus 246 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (377)
T 3dwl_C 246 TVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTF 324 (377)
T ss_dssp CEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------
T ss_pred eecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccc
Confidence 889999999999999999999998866655 67654211 0 0 00
Q ss_pred ---------------EcccCCCeEEEEEeeCC-C---EEEEEeCCCeEEEEeC
Q 038577 515 ---------------SFPHTHDVLTVVYRPDG-R---QLACSTLDGQIHFWDP 548 (860)
Q Consensus 515 ---------------~~~~~~~v~~~~~s~~~-~---~l~~~~~dg~i~iwd~ 548 (860)
...|...|+++++.++. . .|++++.||.|++||+
T Consensus 325 ~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 325 RNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 01288999999976643 3 6999999999999985
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.8e-32 Score=280.94 Aligned_cols=278 Identities=18% Similarity=0.325 Sum_probs=240.2
Q ss_pred eEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe--cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 038577 309 ITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ--QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVT 386 (860)
Q Consensus 309 i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 386 (860)
...++||+++ .|+++ . |++|++||+.+++.+..+ .+|...|.+++|+|+++++++|+.||.|++|++++++.+..
T Consensus 28 ~~~l~WS~~~-~lAvg-~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-L-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEE-E-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECCCC-EEEEE-e-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEE
Confidence 4678999876 56554 3 499999999999887766 46778899999999999999999999999999999999999
Q ss_pred eecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCC
Q 038577 387 FTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKT 466 (860)
Q Consensus 387 ~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~ 466 (860)
+.+|...+.++.+ ++..+++++.++.+++|+.............+...+..+.++++++++++++.|+ .|++||+++
T Consensus 105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~ 181 (318)
T 4ggc_A 105 MTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN-LVNVWPSAP 181 (318)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEESSC
T ss_pred ecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc-ceeEEECCC
Confidence 9999998877654 5679999999999999999887666555556677899999999999999999998 999999998
Q ss_pred Cce----EEEecCcccCeEEEEEcCCCCE---EEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEe-
Q 038577 467 GRL----LDILSGHEGPVHGLVFSPTNAT---LASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACST- 538 (860)
Q Consensus 467 ~~~----~~~~~~h~~~v~~l~~s~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~- 538 (860)
++. ......|.+.|.+++++|++.. +++++.++.|++||..... ......+...+..+.|+|++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-ccccccceeeeeeeeecccccceEEEEE
Confidence 753 4556678899999999997653 3456778999999998876 455566788899999999999888765
Q ss_pred -CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCc
Q 038577 539 -LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 539 -~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
.|+.|++||+.+++++.++.+|.. .|++++|+|||++|++++.||+|++||+.+.
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l~gH~~--------------------~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAELKGHTS--------------------RVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEECCCSS--------------------CEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCEEEEEECCCCcEEEEEcCCCC--------------------CEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 789999999999999999999876 5999999999999999999999999999764
No 93
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.8e-33 Score=282.45 Aligned_cols=248 Identities=21% Similarity=0.287 Sum_probs=213.3
Q ss_pred EEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccC--ceEEEEecCcccCeEEEEEcCC--CCEEEEEeCCCcEEE
Q 038577 300 HLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRS--ESYILKQQGHYFDVNCLAYSPD--SQLLATGADDNKVKV 375 (860)
Q Consensus 300 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i 375 (860)
..+..|...|.+++|+|+|++|++++.+ +.|++||+.. .+.+..+.+|...|.+++|+++ +++|++|+.|++|++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D-~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETT-SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCC-CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 3456788999999999999999998876 9999999974 3667788999999999999874 899999999999999
Q ss_pred EECCCCe--eEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEEEEEcccccee-eEeeCCCCCcEEEEEECCC-----
Q 038577 376 WTVSSGF--CFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVRAWDLFRYRNF-RTFTTPSSRQFVSLASDQS----- 445 (860)
Q Consensus 376 wd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 445 (860)
||+.++. .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.+.... ......+...+.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9998774 56677889999999999997 889999999999999999876422 2233455668999999997
Q ss_pred --------CCEEEEEecCCCeEEEEECCCCc----eEEEecCcccCeEEEEEcCCC---CEEEEEeCCCcEEEEEccCCc
Q 038577 446 --------GEVICAGTLDSFEIFVWSMKTGR----LLDILSGHEGPVHGLVFSPTN---ATLASSSWDKTVRLWNVFEGK 510 (860)
Q Consensus 446 --------~~~l~~~~~~~~~i~v~d~~~~~----~~~~~~~h~~~v~~l~~s~~~---~~l~s~~~dg~i~iwd~~~~~ 510 (860)
+++|++++.|+ .|++||+++++ ....+.+|...|.+++|+|++ .+|++++.|++|++||+....
T Consensus 162 ~~~~~~~~~~~l~sgs~D~-~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp --------CCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ccCCCCCCcceEEEEcCCC-cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 57999999998 99999998876 667889999999999999985 899999999999999998753
Q ss_pred c--eeEE---cccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q 038577 511 G--SVES---FPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 511 ~--~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 549 (860)
. .... ..|...|.+++|+|+|++|++++.||.|++|+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 1 1222 3578899999999999999999999999999976
No 94
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.4e-33 Score=289.46 Aligned_cols=297 Identities=11% Similarity=0.104 Sum_probs=234.8
Q ss_pred CCCeEEEEEcCCCCeEEEeecCC-------eEEEEeecccccCc----ccccceEeecCCCcEEEEEEccCCCCCccceE
Q 038577 141 NDKVTALNWSPDSNYLLVGSKDL-------AVRLFYVKEKLKGI----HTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRI 209 (860)
Q Consensus 141 ~~~v~~l~~s~d~~~l~s~~~dg-------~v~vwd~~~~~~~~----~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l 209 (860)
.-+|.+++|+||+++|++|+.+. .|++|++....... .......+.+|...+.++++.. . .+
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~--~-----~~ 86 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK--G-----II 86 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET--T-----EE
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC--C-----EE
Confidence 45799999999999999987643 59999998662110 0112245678888888887654 3 55
Q ss_pred EEE-----------cCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCE
Q 038577 210 YTI-----------ARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDM 278 (860)
Q Consensus 210 ~s~-----------~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 278 (860)
+++ +.|+.+++|++...... ...+..........+...+.+++|+|||++
T Consensus 87 ~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~ 147 (365)
T 4h5i_A 87 LVGCNENSTKITQGKGNKHLRKFKYDKVNDQ-------------------LEFLTSVDFDASTNADDYTKLVYISREGTV 147 (365)
T ss_dssp EEECCCCHHHHHHTSCCCCEEEEEEETTTTE-------------------EEEEEEECSSCCCCTTCCEEEEEECTTSSC
T ss_pred EEEECCCccEEEEecCCCcEEEEEecCCCce-------------------EEEeeeeceeecCCcccCEEEEEEcCCCCE
Confidence 555 45678999988764330 111111112223344556899999999999
Q ss_pred EEEEE--cCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe--cCcccCeEE
Q 038577 279 VVVGF--SNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ--QGHYFDVNC 354 (860)
Q Consensus 279 l~~~~--~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~--~~~~~~v~~ 354 (860)
+++++ .|+.|++||+.+++.+..+. +...|.+++|+|||+++++++. +.+.+|+..++...... ..|...|.+
T Consensus 148 la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITG--SSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECS--SCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccc--eeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 87655 67999999999999998886 5678999999999999988864 56778887777665443 568888999
Q ss_pred EEEcCCCCEEEEEeCCC----cEEEEECCCCee----EEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccccee
Q 038577 355 LAYSPDSQLLATGADDN----KVKVWTVSSGFC----FVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNF 426 (860)
Q Consensus 355 ~~~s~~~~~l~~~~~dg----~i~iwd~~~~~~----~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~ 426 (860)
++|+|+++.+++++.|+ .++.|++..... ...+.+|...|++++|+|+|++|++|+.|++|++||+.+++.+
T Consensus 225 v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 225 INFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 99999999999999887 688899876643 3467789999999999999999999999999999999999999
Q ss_pred eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC
Q 038577 427 RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG 467 (860)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~ 467 (860)
..+...+...|.+++|+|||++|++++.|+ +|+|||+...
T Consensus 305 ~~~~~gH~~~V~~v~fSpdg~~laS~S~D~-tvrvw~ip~~ 344 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISPDSTYVASVSAAN-TIHIIKLPLN 344 (365)
T ss_dssp EEETTSSSSCEEEEEECTTSCEEEEEETTS-EEEEEECCTT
T ss_pred EEecCcccCCEEEEEECCCCCEEEEEeCCC-eEEEEEcCCC
Confidence 888777888999999999999999999999 9999999643
No 95
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.7e-32 Score=280.19 Aligned_cols=279 Identities=15% Similarity=0.262 Sum_probs=238.6
Q ss_pred eeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEE--eeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeeccc
Q 038577 96 VNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRT--LADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEK 173 (860)
Q Consensus 96 v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~--~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~ 173 (860)
.++|+||+++ +||+|.|+.|+|||+.+++. ... +.+|...|++++|+|++++|++|+.||.|++|++.++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~-------~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDI-------LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCE-------EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCE-------EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 5789999987 89999999999999999873 444 4578889999999999999999999999999999988
Q ss_pred ccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEE
Q 038577 174 LKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWG 253 (860)
Q Consensus 174 ~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (860)
.....+.+|...+.++.+ ++. .+++++.++.+++|+......
T Consensus 100 ------~~~~~~~~h~~~~~~~~~--~~~-----~l~s~~~~~~~~~~~~~~~~~------------------------- 141 (318)
T 4ggc_A 100 ------KRLRNMTSHSARVGSLSW--NSY-----ILSSGSRSGHIHHHDVRVAEH------------------------- 141 (318)
T ss_dssp ------EEEEEEECCSSCEEEEEE--ETT-----EEEEEETTSEEEEEETTSSSC-------------------------
T ss_pred ------eeEEEecCccceEEEeec--CCC-----EEEEEecCCceEeeecCCCce-------------------------
Confidence 678888999999887655 455 899999999999998876432
Q ss_pred eeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCcee----EEEEeecCceeEEEEEeeCCCEEEE--EEcc
Q 038577 254 LLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVC----IHLLSISREKITTAVFNELGNWLVF--GCAK 327 (860)
Q Consensus 254 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~--~~~~ 327 (860)
....+.+|...+.++.+.++++++++++.||.|++||+.+++. ......+...+..+.++|++..++. ++..
T Consensus 142 --~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 142 --HVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred --eEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 2234557888999999999999999999999999999987653 3455667778999999998876553 3345
Q ss_pred CCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCE
Q 038577 328 LGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGA--DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHS 405 (860)
Q Consensus 328 ~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 405 (860)
++.|++||.......... .+...+..+.|+|++..+++++ .|+.|++||+.+++++..+.+|.+.|++++|+|++++
T Consensus 220 ~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 298 (318)
T ss_dssp TCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred CCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 689999999988776654 4666799999999999888765 7899999999999999999999999999999999999
Q ss_pred EEEEeCCCcEEEEEcccc
Q 038577 406 LLSASLDGTVRAWDLFRY 423 (860)
Q Consensus 406 l~s~~~dg~i~~wd~~~~ 423 (860)
|++++.||+|++||+.+.
T Consensus 299 l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 299 VASAAADETLRLWRCFEL 316 (318)
T ss_dssp EEEEETTTEEEEECCSCC
T ss_pred EEEEecCCeEEEEECCCC
Confidence 999999999999998654
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-32 Score=287.01 Aligned_cols=278 Identities=14% Similarity=0.147 Sum_probs=242.5
Q ss_pred EeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce---EEEEecCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEE
Q 038577 302 LSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES---YILKQQGHYFDVNCLAYSPDSQ-LLATGADDNKVKVWT 377 (860)
Q Consensus 302 ~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd 377 (860)
...|.+.|.+++|+|+++.+++++.+ |.|++|++.++. .......|...|.+++|+|+++ +|++|+.||.|++||
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d-~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWD-GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETT-SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCC-CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 34678899999999999999988776 999999998876 3444568999999999999999 999999999999999
Q ss_pred C-CCCeeEEEeec--CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc---------cceeeEeeCCCCCcEEEEEECCC
Q 038577 378 V-SSGFCFVTFTE--HTNAVTALHFMANNHSLLSASLDGTVRAWDLFR---------YRNFRTFTTPSSRQFVSLASDQS 445 (860)
Q Consensus 378 ~-~~~~~~~~~~~--~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 445 (860)
+ .++.. ..+.. |...|.+++|+| +..+++++.|+.|++||+.+ .+....+. ....+.+++++|+
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--VKNKIFTMDTNSS 161 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS--SCCCEEEEEECSS
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe--eCCceEEEEecCC
Confidence 9 77654 67778 999999999999 99999999999999999987 66665555 5568999999998
Q ss_pred CCEEEEEecCCCeEEEEECCC-Cc--eEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCC------cceeEE
Q 038577 446 GEVICAGTLDSFEIFVWSMKT-GR--LLDILSGHEGPVHGLVFSP-TNATLASSSWDKTVRLWNVFEG------KGSVES 515 (860)
Q Consensus 446 ~~~l~~~~~~~~~i~v~d~~~-~~--~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~------~~~~~~ 515 (860)
+ +++++.++ .|++||+++ +. .......|...|.+++|+| +++++++++.||.|++|++... +....+
T Consensus 162 ~--l~~~~~d~-~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 162 R--LIVGMNNS-QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp E--EEEEESTT-EEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred c--EEEEeCCC-eEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 8 88888888 999999998 54 3445567889999999999 9999999999999999999876 556666
Q ss_pred cccCC---------CeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecc-cccCCCccccccccccccCCCCcEE
Q 038577 516 FPHTH---------DVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGR-RDISGGRLMTDRRSAANSSSGKCFT 585 (860)
Q Consensus 516 ~~~~~---------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~ 585 (860)
..|.. .|.+++|+|++++|++++.||.|++||+.+++.+..+.+| .. .|.
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~--------------------~v~ 298 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED--------------------SVV 298 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS--------------------EEE
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC--------------------Cce
Confidence 66654 9999999999999999999999999999999999998887 53 589
Q ss_pred EEEEecCCCEEEEecCCCe-EEEEE
Q 038577 586 TLCYSADGSYILAGGSSKY-ICMYD 609 (860)
Q Consensus 586 ~l~~s~~g~~l~~~~~dg~-v~vwd 609 (860)
+++ |+|++|++++.||. .+.|.
T Consensus 299 ~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 299 KIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEE--ECSSEEEEEEECTHHHHCSS
T ss_pred Eec--CCCCeEEEEecCCccccccc
Confidence 999 99999999999998 55554
No 97
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.2e-32 Score=289.21 Aligned_cols=298 Identities=14% Similarity=0.232 Sum_probs=231.4
Q ss_pred EEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc----eEEEEecCcccCeEEEEEcC--CCCEEEEEeCCCcEE
Q 038577 301 LLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE----SYILKQQGHYFDVNCLAYSP--DSQLLATGADDNKVK 374 (860)
Q Consensus 301 ~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~----~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~ 374 (860)
.+..|...|.+++|+|+++++++++.+ |.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||.|+
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSD-QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETT-SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCC-CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456788999999999999999988776 99999999876 46667789999999999999 699999999999999
Q ss_pred EEECCCC---------eeEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEEEEEccccceeeEee------------C
Q 038577 375 VWTVSSG---------FCFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVRAWDLFRYRNFRTFT------------T 431 (860)
Q Consensus 375 iwd~~~~---------~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~~~------------~ 431 (860)
+||+.++ +.+..+..|...|.+++|+|+ +.++++++.||.|++||+.+++....+. .
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999887 668888899999999999999 9999999999999999998877554433 1
Q ss_pred CCCCcEEEEEECCC---CCEEEEEecCCCeEEEEECCCCce--EEEecCcccCeEEEEEcCCC----CEEEEEeCCCcEE
Q 038577 432 PSSRQFVSLASDQS---GEVICAGTLDSFEIFVWSMKTGRL--LDILSGHEGPVHGLVFSPTN----ATLASSSWDKTVR 502 (860)
Q Consensus 432 ~~~~~~~~~~~~~~---~~~l~~~~~~~~~i~v~d~~~~~~--~~~~~~h~~~v~~l~~s~~~----~~l~s~~~dg~i~ 502 (860)
.+...+.+++++|+ +..+++++.++ .+.+|+...++. +..+.+|...|++++|+|++ ++|++++.||.|+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQ-AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTE-EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCC-cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 45567899999997 99999999998 888888887765 67788999999999999998 8999999999999
Q ss_pred EEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEe----CCCeEEEEeCCCCceeEEEecccccCCCcccccccccccc
Q 038577 503 LWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACST----LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANS 578 (860)
Q Consensus 503 iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 578 (860)
+||+..+........+.........++....++.+. ....+.+|+..+.+.+..+.+|..
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------------- 307 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG---------------- 307 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEEEEEECTTSS----------------
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc----------------
Confidence 999988765544444444455555555554444443 344567777777778888887765
Q ss_pred CCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEe
Q 038577 579 SSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 579 ~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~ 620 (860)
.|++++|+|+|++|++++.||.|++|++.+++.++.+.
T Consensus 308 ----~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 308 ----EVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp ----CEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred ----cEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 59999999999999999999999999999987776554
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-32 Score=298.65 Aligned_cols=300 Identities=15% Similarity=0.243 Sum_probs=237.9
Q ss_pred cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce-----------EEEEecCcc------------cCeEEEEEcCCC
Q 038577 305 SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES-----------YILKQQGHY------------FDVNCLAYSPDS 361 (860)
Q Consensus 305 ~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~-----------~~~~~~~~~------------~~v~~~~~s~~~ 361 (860)
+.+.|.+++|+|+|++|++++.+ |.|++||+.++. ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKG-GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETT-SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred ccCcEEEEEECCCCCEEEEEcCC-CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 45789999999999999998876 999999999876 477778898 889999999998
Q ss_pred --CEEEEEeCCCcEEEEECCCCeeE---------------------------------------EE-eecCCCceEEEEE
Q 038577 362 --QLLATGADDNKVKVWTVSSGFCF---------------------------------------VT-FTEHTNAVTALHF 399 (860)
Q Consensus 362 --~~l~~~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~i~~ 399 (860)
..+++++.|+.|++||+.++... .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764432 12 3579999999999
Q ss_pred eeCCCEEEEEeCCCcEEEEEccc-cceeeEe------eCCCCCcEEEEEECCCC-CEEEEEecCCCeEEEEECCCCce--
Q 038577 400 MANNHSLLSASLDGTVRAWDLFR-YRNFRTF------TTPSSRQFVSLASDQSG-EVICAGTLDSFEIFVWSMKTGRL-- 469 (860)
Q Consensus 400 ~~~~~~l~s~~~dg~i~~wd~~~-~~~~~~~------~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~i~v~d~~~~~~-- 469 (860)
+|++++|+++ .|+.|++||+.+ .+....+ ...+...+.+++|+|++ .++++++.|+ .|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-TIRLCDMRASALCD 263 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-CEEEEETTTCSSSC
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-eEEEEECcCCcccc
Confidence 9999999998 799999999984 4444432 22455679999999999 9999999998 999999999887
Q ss_pred --EEEecCccc------------CeEEEEEcCCCCEEEEEeCCCcEEEEEccC-CcceeEEcccCCC-------------
Q 038577 470 --LDILSGHEG------------PVHGLVFSPTNATLASSSWDKTVRLWNVFE-GKGSVESFPHTHD------------- 521 (860)
Q Consensus 470 --~~~~~~h~~------------~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~------------- 521 (860)
...+.+|.. .|.+++|+|++++|++++. +.|++||+.. ++....+..|...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 788888876 9999999999999999998 9999999987 6656666566431
Q ss_pred --eEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCcccc-------------ccccccccCCCCcEEE
Q 038577 522 --VLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMT-------------DRRSAANSSSGKCFTT 586 (860)
Q Consensus 522 --v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~i~~ 586 (860)
+..++|+|++++|++++.||.|++||+.+++.+ .+..+.......... .............|..
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 334999999999999999999999999998876 444443221111000 0001111234567899
Q ss_pred EEEecCCCEEEEecCCCeEEEEEC
Q 038577 587 LCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 587 l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
++|+|+|++|++++.++ +++|..
T Consensus 422 ~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp EEECSSSSEEEEECSSC-EEEEEC
T ss_pred EEECCCCCEEEEEecce-eeeecc
Confidence 99999999999998877 777764
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.4e-32 Score=293.88 Aligned_cols=277 Identities=22% Similarity=0.372 Sum_probs=240.6
Q ss_pred cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 038577 305 SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCF 384 (860)
Q Consensus 305 ~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 384 (860)
+...|.++.+ +++.+++++.+ |.|++||+.+++....+.+|...|.+++| +++.+++|+.||.|++||+.+++.+
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRD-NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESS-SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCC-CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE
Confidence 4456776665 78898888776 99999999999999999999999999998 7889999999999999999999999
Q ss_pred EEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceee--EeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEE
Q 038577 385 VTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFR--TFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVW 462 (860)
Q Consensus 385 ~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~ 462 (860)
..+..|...|.+++|++ ..+++++.||.|++||+.++.... .....+...+.++.+ +++++++++.|+ .|++|
T Consensus 207 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg-~i~vw 281 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR-TIKVW 281 (435)
T ss_dssp EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS-EEEEE
T ss_pred EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC-eEEEE
Confidence 99999999999999974 499999999999999998877553 344456668888888 789999999998 99999
Q ss_pred ECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCe
Q 038577 463 SMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQ 542 (860)
Q Consensus 463 d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 542 (860)
|+++++.+..+.+|...|.++++ ++.++++++.||.|++||+.+++....+..|...|.+++| ++.+|++|+.||.
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred ECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 99999999999999999999999 5789999999999999999999988888899999999999 7889999999999
Q ss_pred EEEEeCCCCc---------eeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCc
Q 038577 543 IHFWDPLNGE---------LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 543 i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
|++||+.+++ .+..+.+|.. .|.+++| ++++|++++.||.|++||+.++
T Consensus 358 i~vwd~~~~~~~~~~~~~~~~~~~~~h~~--------------------~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 358 IKVWDLVAALDPRAPAGTLCLRTLVEHSG--------------------RVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EEEEEHHHHTSTTSCTTTTEEEEECCCSS--------------------CCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred EEEEECCCCCCccccccchheeeccCCCC--------------------CeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 9999987765 6677766654 5899999 8899999999999999999887
Q ss_pred eEEE
Q 038577 614 VLLR 617 (860)
Q Consensus 614 ~~~~ 617 (860)
....
T Consensus 416 ~~~~ 419 (435)
T 1p22_A 416 PAAQ 419 (435)
T ss_dssp ----
T ss_pred CCcc
Confidence 6554
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.1e-32 Score=291.87 Aligned_cols=280 Identities=21% Similarity=0.392 Sum_probs=242.7
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceE
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESY 341 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~ 341 (860)
.+...|.++.+ +++.+++|+.||.|++||+.+++....+..|...|.+++| +++.+++++.+ |.|++||+.+++.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d-g~i~vwd~~~~~~ 205 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD-STVRVWDVNTGEM 205 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT-SCEEEEESSSCCE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC-CeEEEEECCCCcE
Confidence 45567888876 7899999999999999999999999999999999999998 78888888766 9999999999999
Q ss_pred EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE---EEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEE
Q 038577 342 ILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCF---VTFTEHTNAVTALHFMANNHSLLSASLDGTVRAW 418 (860)
Q Consensus 342 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~w 418 (860)
+..+.+|...|.+++|++ ..+++|+.||.|++||+.++... ..+.+|...|.++++ +++++++++.||.|++|
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 999999999999999974 59999999999999999887655 677889999999999 67899999999999999
Q ss_pred EccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCC
Q 038577 419 DLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWD 498 (860)
Q Consensus 419 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d 498 (860)
|+.+++....+..+ ...+.++.+ ++.++++++.|+ .|++||+++++.+..+.+|...|.+++| ++.+|++++.|
T Consensus 282 d~~~~~~~~~~~~~-~~~v~~~~~--~~~~l~~g~~dg-~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 282 NTSTCEFVRTLNGH-KRGIACLQY--RDRLVVSGSSDN-TIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp ETTTCCEEEEEECC-SSCEEEEEE--ETTEEEEEETTS-CEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred ECCcCcEEEEEcCC-CCcEEEEEe--CCCEEEEEeCCC-eEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 99999988888754 457788887 578999999998 9999999999999999999999999999 78999999999
Q ss_pred CcEEEEEccCCc---------ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEe
Q 038577 499 KTVRLWNVFEGK---------GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIE 558 (860)
Q Consensus 499 g~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 558 (860)
|.|++||+.++. ....+..|...|.+++| ++++|++++.||.|++||+.+........
T Consensus 356 g~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~ 422 (435)
T 1p22_A 356 GKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP 422 (435)
T ss_dssp SCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----------
T ss_pred CcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC
Confidence 999999997665 56677789999999999 78899999999999999998876554443
No 101
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.7e-33 Score=285.75 Aligned_cols=245 Identities=17% Similarity=0.220 Sum_probs=203.7
Q ss_pred ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--eEEEeecCCCceEEEEEee--CCCEEEEEeCCCcEEEEEc
Q 038577 345 QQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGF--CFVTFTEHTNAVTALHFMA--NNHSLLSASLDGTVRAWDL 420 (860)
Q Consensus 345 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~dg~i~~wd~ 420 (860)
+.+|...|.+++|+|+|++|++|+.|++|++||+.++. .+..+.+|..+|.+++|++ ++++|++++.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 36899999999999999999999999999999998775 4678899999999999986 4889999999999999999
Q ss_pred cccc--eeeEeeCCCCCcEEEEEECCC--CCEEEEEecCCCeEEEEECCCCce---EEEecCcccCeEEEEEcCC-----
Q 038577 421 FRYR--NFRTFTTPSSRQFVSLASDQS--GEVICAGTLDSFEIFVWSMKTGRL---LDILSGHEGPVHGLVFSPT----- 488 (860)
Q Consensus 421 ~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~v~d~~~~~~---~~~~~~h~~~v~~l~~s~~----- 488 (860)
.+++ ....+ ..+...+.+++|+|+ +.++++++.|+ .|++||++.+.. ...+.+|...|.+++|+|+
T Consensus 89 ~~~~~~~~~~~-~~h~~~V~~v~~~p~~~g~~lasgs~D~-~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 89 ENGTWEKSHEH-AGHDSSVNSVCWAPHDYGLILACGSSDG-AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp SSSCCCEEEEE-CCCSSCCCEEEECCTTTCSCEEEECSSS-CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCcceEEEEc-cCCCCceEEEEECCCCCCcEEEEEcCCC-CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 8764 23333 345568999999998 88999999998 999999987642 3456789999999999997
Q ss_pred ------------CCEEEEEeCCCcEEEEEccCCc---ceeEEcccCCCeEEEEEeeCC----CEEEEEeCCCeEEEEeCC
Q 038577 489 ------------NATLASSSWDKTVRLWNVFEGK---GSVESFPHTHDVLTVVYRPDG----RQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 489 ------------~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~i~iwd~~ 549 (860)
+++|++++.|+.|++||+.... ....+..|...|.+++|+|++ ++|++++.||+|++|++.
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 4789999999999999997552 344556799999999999986 899999999999999987
Q ss_pred CCc----eeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECC
Q 038577 550 NGE----LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 550 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~ 611 (860)
+.. ....+..|. ..|.+++|+|+|++|++++.|+.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~--------------------~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFN--------------------DVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECS--------------------SCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCC--------------------CcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 631 122233333 359999999999999999999999999986
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-32 Score=285.58 Aligned_cols=262 Identities=17% Similarity=0.194 Sum_probs=219.2
Q ss_pred EEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC--CCeeEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEE
Q 038577 341 YILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS--SGFCFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVR 416 (860)
Q Consensus 341 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~ 416 (860)
.+..+.+|...|.+++|+|++++|++|+.||.|++||+. ++..+..+.+|...|.+++|+++ +++|++++.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 344567899999999999999999999999999999998 56777888999999999999977 89999999999999
Q ss_pred EEEccccc--eeeEeeCCCCCcEEEEEECCC--CCEEEEEecCCCeEEEEECCCCc--eEEEecCcccCeEEEEEcC---
Q 038577 417 AWDLFRYR--NFRTFTTPSSRQFVSLASDQS--GEVICAGTLDSFEIFVWSMKTGR--LLDILSGHEGPVHGLVFSP--- 487 (860)
Q Consensus 417 ~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~v~d~~~~~--~~~~~~~h~~~v~~l~~s~--- 487 (860)
+||+.+++ ....+ ..+...+.+++++|+ +.++++++.++ .|++||+.++. ....+.+|...|.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 83 IWKEENGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDG-KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEETTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTS-EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEcCCCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCC-cEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 99999886 33333 335668999999999 99999999999 99999999873 4556778999999999999
Q ss_pred ----------CCCEEEEEeCCCcEEEEEccCCcce----eEEcccCCCeEEEEEeeC---CCEEEEEeCCCeEEEEeCCC
Q 038577 488 ----------TNATLASSSWDKTVRLWNVFEGKGS----VESFPHTHDVLTVVYRPD---GRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 488 ----------~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~ 550 (860)
++.++++++.||.|++||+.++... ..+..|...|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 6999999999999999999877533 345579999999999999 89999999999999999988
Q ss_pred CceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEE
Q 038577 551 GELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRF 619 (860)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~ 619 (860)
+.......... ...+...|++++|+|+|++|++++.||.|++|++..+.....+
T Consensus 241 ~~~~~~~~~~~---------------~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~ 294 (379)
T 3jrp_A 241 EQGPWKKTLLK---------------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 294 (379)
T ss_dssp TTSCCEEEESS---------------SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEEE
T ss_pred CCccceeeeec---------------cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCccccc
Confidence 75221111100 0112346999999999999999999999999999865544433
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6e-32 Score=282.62 Aligned_cols=278 Identities=13% Similarity=0.094 Sum_probs=245.6
Q ss_pred cCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce---eEEEEeecCceeEEEEEeeCCC-EEEEEEccCCcEEEEEc
Q 038577 261 SQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV---CIHLLSISREKITTAVFNELGN-WLVFGCAKLGQLLVWEW 336 (860)
Q Consensus 261 ~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~---~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~~~g~i~v~d~ 336 (860)
.+|...|.+++|+|++++|++++.||.|++|++.++. ....+..+...|.+++|+|+++ .+++++.+ |.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-GEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT-SCEEEECS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC-CeEEEEEe
Confidence 4688899999999999999999999999999998776 3455668889999999999999 88888765 99999999
Q ss_pred -cCceEEEEecC--cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---------CeeEEEeecCCCceEEEEEeeCCC
Q 038577 337 -RSESYILKQQG--HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSS---------GFCFVTFTEHTNAVTALHFMANNH 404 (860)
Q Consensus 337 -~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~i~~~~~~~ 404 (860)
.++.. ..+.+ |...|.+++|+| +..+++++.|+.|++||+.+ ++.+..+. |...|.+++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 77755 56677 999999999999 99999999999999999987 66666665 88999999999886
Q ss_pred EEEEEeCCCcEEEEEccc-cce-eeEeeCCCCCcEEEEEECC-CCCEEEEEecCCCeEEEEECCCC------ceEEEecC
Q 038577 405 SLLSASLDGTVRAWDLFR-YRN-FRTFTTPSSRQFVSLASDQ-SGEVICAGTLDSFEIFVWSMKTG------RLLDILSG 475 (860)
Q Consensus 405 ~l~s~~~dg~i~~wd~~~-~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~v~d~~~~------~~~~~~~~ 475 (860)
+++++.|+.|++||+.+ +.. ...........+.+++++| +++++++++.++ .+++|+++.. +....+.+
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~~~~ 240 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDG-RVAVEFFDDQGDDYNSSKRFAFRC 240 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTS-EEEEEECCTTCCSTTCTTCEEEEC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCC-cEEEEEEcCCCcccccccceeeec
Confidence 99999999999999988 553 3445556677899999999 999999999998 9999999887 78888888
Q ss_pred ccc---------CeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEccc-CCCeEEEEEeeCCCEEEEEeCCCe-EE
Q 038577 476 HEG---------PVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPH-THDVLTVVYRPDGRQLACSTLDGQ-IH 544 (860)
Q Consensus 476 h~~---------~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~-i~ 544 (860)
|.. .|.+++|+|++++|++++.||.|++||+.+++....+..| ...|.+++ |++++|++++.||. .+
T Consensus 241 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~ 318 (342)
T 1yfq_A 241 HRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKT 318 (342)
T ss_dssp CCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHH
T ss_pred ccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccc
Confidence 865 9999999999999999999999999999999877777787 99999999 99999999999998 55
Q ss_pred EEe
Q 038577 545 FWD 547 (860)
Q Consensus 545 iwd 547 (860)
.|.
T Consensus 319 ~~~ 321 (342)
T 1yfq_A 319 NAA 321 (342)
T ss_dssp CSS
T ss_pred ccc
Confidence 555
No 104
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.3e-32 Score=284.94 Aligned_cols=311 Identities=13% Similarity=0.142 Sum_probs=227.6
Q ss_pred EeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccC----eEEEEee-cCCceeEEEECC--CCCEEEEE-eCCeE
Q 038577 45 VTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCH----VVLHRVR-FKYPVNAILFSP--NGKYIAVG-TGKLV 116 (860)
Q Consensus 45 ~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~----~~~~~~~-~~~~v~~~~fsp--dg~~la~~-~~~~i 116 (860)
..++.+|...|++++|+|+|++||+++.||.|++||+.++ +.+..+. |..+|.+++|+| |+++|+++ .|+.|
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 3456699999999999999999999999999999999976 4555555 899999999999 69999998 78999
Q ss_pred EEEeCCCCCcc--cceeEEEEEeeccCCCeEEEEEcCC--CCeEEEeecCCeEEEEeecccccCccccc--------ceE
Q 038577 117 QIWRSPGFKKE--VFAFELIRTLADCNDKVTALNWSPD--SNYLLVGSKDLAVRLFYVKEKLKGIHTNK--------PFL 184 (860)
Q Consensus 117 ~iwd~~~~~~~--~~~~~~~~~~~~h~~~v~~l~~s~d--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~--------~~~ 184 (860)
++||+.+++.. ...+.+...+.+|.+.|.+++|+|+ +++|++++.||.|++||+.+. +...... ...
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP-SDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSST-TCTTCCEEEEEEESCSCC
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh-HHhccccccccccccccc
Confidence 99999886421 1123467888899999999999999 999999999999999999877 2211000 011
Q ss_pred eecCCCcEEEEEEccC---CCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeecccc
Q 038577 185 LLGHRDSVVGCFFSVD---KKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFS 261 (860)
Q Consensus 185 ~~~h~~~i~~~~~~~~---~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (860)
..+|...+.++.|+|+ +. .+++++.|+.+.+|+...+.. .....+.
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~-----~l~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~ 211 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPE-----KLAVSALEQAIIYQRGKDGKL--------------------------HVAAKLP 211 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCC-----EEEEEETTEEEEEEECTTSCE--------------------------EEEEECC
T ss_pred cCCcccceeEEEeccCCCCCc-----EEEEecCCCcEEEEccCCCce--------------------------eeeeecC
Confidence 2268889999999997 66 999999999998887665321 1233456
Q ss_pred CCCCceEEEEecCCC----CEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEcc---CCcEEEE
Q 038577 262 QAPSKVTACDYHRGL----DMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAK---LGQLLVW 334 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~----~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~---~g~i~v~ 334 (860)
.|...|.+++|+|++ +++++++.||.|++||+..+..................++.......+... ...+.+|
T Consensus 212 ~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 212 GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 788899999999998 899999999999999997665554444333344444444444443333222 2455667
Q ss_pred EccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 038577 335 EWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 335 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 387 (860)
+......+..+.+|...|++++|+|++++|++++.||.|++|++.++.....+
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 77777888888999999999999999999999999999999999987655443
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-32 Score=294.25 Aligned_cols=286 Identities=19% Similarity=0.271 Sum_probs=243.3
Q ss_pred EEEEEeeCCCEEEEEEccCCcEEEEEccCce----EEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC---
Q 038577 310 TTAVFNELGNWLVFGCAKLGQLLVWEWRSES----YILKQQGHYFDVNCLAYSP-DSQLLATGADDNKVKVWTVSSG--- 381 (860)
Q Consensus 310 ~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~----~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~--- 381 (860)
..++++|+...+++.+..+|.|++|++.... ....+.+|...|.+++|+| ++++|++|+.||.|++||+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 4577777777777666667999999996543 2334578999999999999 9999999999999999999987
Q ss_pred ----eeEEEeecCCCceEEEEEeeCC-CEEEEEeCCCcEEEEEccccceeeEee-CCCCCcEEEEEECCCCCEEEEEecC
Q 038577 382 ----FCFVTFTEHTNAVTALHFMANN-HSLLSASLDGTVRAWDLFRYRNFRTFT-TPSSRQFVSLASDQSGEVICAGTLD 455 (860)
Q Consensus 382 ----~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~ 455 (860)
..+..+.+|...|.+++|+|++ +.|++++.||.|++||+.+++....+. ..+...+.+++++|++.++++++.|
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 6678889999999999999998 699999999999999999998888875 5566789999999999999999999
Q ss_pred CCeEEEEECCCCceEEEe-cCcccC-eEEEEEcCCCCEEEEE---eCCCcEEEEEccCCccee--EEcccCCCeEEEEEe
Q 038577 456 SFEIFVWSMKTGRLLDIL-SGHEGP-VHGLVFSPTNATLASS---SWDKTVRLWNVFEGKGSV--ESFPHTHDVLTVVYR 528 (860)
Q Consensus 456 ~~~i~v~d~~~~~~~~~~-~~h~~~-v~~l~~s~~~~~l~s~---~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s 528 (860)
+ .|++||+++++.+..+ .+|.+. +.+++|+|++++|+++ +.|+.|++||+.+.+... ....+...+.+++|+
T Consensus 198 ~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 198 K-RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFD 276 (402)
T ss_dssp S-EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEE
T ss_pred C-cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEc
Confidence 8 9999999999999988 788876 8999999999999999 789999999998876422 233678889999999
Q ss_pred eCCCEEEEE-eCCCeEEEEeCCCCce-eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEE
Q 038577 529 PDGRQLACS-TLDGQIHFWDPLNGEL-MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYIC 606 (860)
Q Consensus 529 ~~~~~l~~~-~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~ 606 (860)
|++++|+++ +.||.|++||+.+++. +..+..+.. ...|.+++|+|++.++++ .++.++
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~------------------~~~v~~~~~sp~~~~~~s--~~~~~~ 336 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSS------------------KESQRGMGYMPKRGLEVN--KCEIAR 336 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECC------------------SSCCSEEEECCGGGSCGG--GTEEEE
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeeccccc------------------CCcccceEEeccccccee--cceeEE
Confidence 999999754 5799999999999885 555555431 135899999999998875 566999
Q ss_pred EEECCCceEE
Q 038577 607 MYDVADQVLL 616 (860)
Q Consensus 607 vwd~~~~~~~ 616 (860)
+|++.++.+.
T Consensus 337 ~~~l~~~~~~ 346 (402)
T 2aq5_A 337 FYKLHERKCE 346 (402)
T ss_dssp EEEEETTEEE
T ss_pred EEEcCCCcEE
Confidence 9999987643
No 106
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=282.78 Aligned_cols=254 Identities=21% Similarity=0.291 Sum_probs=220.8
Q ss_pred eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc--CceEEEEecCcccCeEEEEEcCC--CCEEEEEeCCCc
Q 038577 297 VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR--SESYILKQQGHYFDVNCLAYSPD--SQLLATGADDNK 372 (860)
Q Consensus 297 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~ 372 (860)
+.+..+..|...|.+++|+|+++++++++.+ |.|++||+. ++.....+.+|...|.+++|+++ +++|++++.||.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETT-SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECC-CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 4556778899999999999999999988766 999999998 66777788899999999999987 999999999999
Q ss_pred EEEEECCCCe--eEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEEEEEccccceeeE-eeCCCCCcEEEEEECC---
Q 038577 373 VKVWTVSSGF--CFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVRAWDLFRYRNFRT-FTTPSSRQFVSLASDQ--- 444 (860)
Q Consensus 373 i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~--- 444 (860)
|++||+.++. .+..+..|...|.+++|+|+ +.++++++.|+.|++||+.+...... ....+...+.+++++|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999987 77788889999999999999 99999999999999999988744332 2334566899999999
Q ss_pred ----------CCCEEEEEecCCCeEEEEECCCCc----eEEEecCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEEcc
Q 038577 445 ----------SGEVICAGTLDSFEIFVWSMKTGR----LLDILSGHEGPVHGLVFSPT---NATLASSSWDKTVRLWNVF 507 (860)
Q Consensus 445 ----------~~~~l~~~~~~~~~i~v~d~~~~~----~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~dg~i~iwd~~ 507 (860)
++.++++++.++ .|++||+++++ ....+.+|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---------CTTCEEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cccccccCCCCCCEEEEEeCCC-eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 699999999998 99999998765 45678889999999999999 8999999999999999998
Q ss_pred CCcce-----eEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc
Q 038577 508 EGKGS-----VESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGE 552 (860)
Q Consensus 508 ~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 552 (860)
++... .....|...|++++|+|++++|++++.||.|++|++..+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 240 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 86421 1222488899999999999999999999999999998554
No 107
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.3e-32 Score=280.59 Aligned_cols=247 Identities=18% Similarity=0.250 Sum_probs=207.0
Q ss_pred EEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce--EEEEecCcccCeEEEEEcC--CCCEEEEEeCCCcEEEE
Q 038577 301 LLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES--YILKQQGHYFDVNCLAYSP--DSQLLATGADDNKVKVW 376 (860)
Q Consensus 301 ~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iw 376 (860)
.+..|.+.|.+++|+|+|++|++++.+ +.|++||+.++. .+..+.+|...|.+++|++ ++++|++|+.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D-~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSD-RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETT-TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCC-CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 345788999999999999999998776 999999998764 4567789999999999986 48999999999999999
Q ss_pred ECCCC--eeEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEEEEEcccccee--eEeeCCCCCcEEEEEECCC-----
Q 038577 377 TVSSG--FCFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVRAWDLFRYRNF--RTFTTPSSRQFVSLASDQS----- 445 (860)
Q Consensus 377 d~~~~--~~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~--~~~~~~~~~~~~~~~~~~~----- 445 (860)
|++++ .....+.+|...|.+++|+|+ +.+|++++.|+.|++||+...... ......+...+.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99887 466778889999999999998 789999999999999999876332 2223345557788899987
Q ss_pred ------------CCEEEEEecCCCeEEEEECCCC---ceEEEecCcccCeEEEEEcCCC----CEEEEEeCCCcEEEEEc
Q 038577 446 ------------GEVICAGTLDSFEIFVWSMKTG---RLLDILSGHEGPVHGLVFSPTN----ATLASSSWDKTVRLWNV 506 (860)
Q Consensus 446 ------------~~~l~~~~~~~~~i~v~d~~~~---~~~~~~~~h~~~v~~l~~s~~~----~~l~s~~~dg~i~iwd~ 506 (860)
+.++++++.|+ .|++||++.+ +.+..+.+|...|.+++|+|++ .+|++++.||+|++|++
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~-~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDN-LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTS-BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred ccccccccCccccceEEEecCCC-eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 47899999998 9999999765 4677889999999999999986 89999999999999999
Q ss_pred cCCc----ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q 038577 507 FEGK----GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 507 ~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 549 (860)
.+.. ....+..|...|.+++|+|++++|++++.||.|++|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 7631 122344688999999999999999999999999999975
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.1e-30 Score=280.53 Aligned_cols=298 Identities=15% Similarity=0.123 Sum_probs=247.7
Q ss_pred eEEEEECCCc--eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEE-----ecCcccCeEEEEEcC
Q 038577 287 VFGLYQMPDF--VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILK-----QQGHYFDVNCLAYSP 359 (860)
Q Consensus 287 ~i~~~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~-----~~~~~~~v~~~~~s~ 359 (860)
.|..++..++ +.+..+..+ ..+.+++|+| +..+++++..++.|++||+.+++.... +.+|...|.+++|+|
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~ 179 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE 179 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC
Confidence 4445555334 455555544 3466899999 666666666668999999999988763 357888999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEE-eCCCcEEEEEccccceeeEeeCCCCCcEE
Q 038577 360 DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSA-SLDGTVRAWDLFRYRNFRTFTTPSSRQFV 438 (860)
Q Consensus 360 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 438 (860)
++..+++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++++ +.|+.|++||+.+++....+... ..+.
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~ 257 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI--GLPR 257 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC--SEEE
T ss_pred CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC--CCce
Confidence 99999999999999999999999999998999999999999999888554 47999999999988877766543 4689
Q ss_pred EEEECCCCCEEEEEec--------CCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCC
Q 038577 439 SLASDQSGEVICAGTL--------DSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATL-ASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~--------~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~ 509 (860)
+++++|+++++++++. ++ .|++||+.+++.+..+. |...+.+++|+|+++.+ ++++.|+.|++||+.++
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg-~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGG-RLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCE-EEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEcCCCCEEEEEECCCCccccCCC-eEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 9999999999998884 55 99999999998877664 67789999999999755 66688999999999988
Q ss_pred cceeEEcccCCCeEEEEEeeCCCEEEEEeC---------------CCeEEEEeCCCCceeEEEecccccCCCcccccccc
Q 038577 510 KGSVESFPHTHDVLTVVYRPDGRQLACSTL---------------DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRS 574 (860)
Q Consensus 510 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (860)
+.. ....+...+.+++|+|+|+++++++. ||.|++||+.+++.+..+..+.
T Consensus 336 ~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~------------- 401 (433)
T 3bws_A 336 KVQ-KSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN------------- 401 (433)
T ss_dssp EEE-EEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS-------------
T ss_pred cEE-EEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC-------------
Confidence 744 44457788999999999999998876 5799999999999988887644
Q ss_pred ccccCCCCcEEEEEEecCCCEEEEecC-CCeEEEEECCC
Q 038577 575 AANSSSGKCFTTLCYSADGSYILAGGS-SKYICMYDVAD 612 (860)
Q Consensus 575 ~~~~~~~~~i~~l~~s~~g~~l~~~~~-dg~v~vwd~~~ 612 (860)
.+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 402 --------~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 402 --------QPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp --------SEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred --------CCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 3899999999999998775 99999999863
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=282.93 Aligned_cols=293 Identities=11% Similarity=0.172 Sum_probs=240.7
Q ss_pred EECCCCcEEeeccCCccCeeEEEEcCC---CCEEEEEcCCCcEEEEEccc-CeEE-EEee-cCCceeEEEECCCCCEEEE
Q 038577 37 TDLIKSKTVTLPVESSSNICRIAVSPD---GTFLLTVDENQRCHFINLHC-HVVL-HRVR-FKYPVNAILFSPNGKYIAV 110 (860)
Q Consensus 37 ~d~~~~~~~~~~~~h~~~v~~va~spd---g~~la~~~~d~~i~vwd~~~-~~~~-~~~~-~~~~v~~~~fspdg~~la~ 110 (860)
++....+....+.+|.+.|++++|+|+ |++||+++.||.|++||+.+ +..+ ..+. |..+|.+++|+|++++|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 445566667778899999999999999 69999999999999999997 5554 4454 8999999999999999999
Q ss_pred E-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEE--cCCCCeEEEeecCCeEEEEeecccccCcccccceEeec
Q 038577 111 G-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNW--SPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLG 187 (860)
Q Consensus 111 ~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 187 (860)
+ .|+.|++||+.+++ ...+.+|...|.+++| +|++++|++++.||.|++||+.++ .....+..
T Consensus 104 ~~~dg~v~iwd~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~------~~~~~~~~ 169 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQ--------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS------NPMMVLQL 169 (368)
T ss_dssp EETTSEEEEEETTTTE--------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS------SCSEEEEC
T ss_pred EcCCCcEEEEEcCCCC--------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC------cEEEEEec
Confidence 8 78999999999876 2346779999999999 999999999999999999999987 45666666
Q ss_pred CCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCce
Q 038577 188 HRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKV 267 (860)
Q Consensus 188 h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 267 (860)
|. .+.++.+.+ . .+++++.++.+.+|++..... .+ ..........+
T Consensus 170 ~~-~~~~~~~~~--~-----~~~~~~~~~~i~~~~~~~~~~----------------------~~----~~~~~~~~~~~ 215 (368)
T 3mmy_A 170 PE-RCYCADVIY--P-----MAVVATAERGLIVYQLENQPS----------------------EF----RRIESPLKHQH 215 (368)
T ss_dssp SS-CEEEEEEET--T-----EEEEEEGGGCEEEEECSSSCE----------------------EE----EECCCSCSSCE
T ss_pred CC-CceEEEecC--C-----eeEEEeCCCcEEEEEeccccc----------------------hh----hhccccccCCC
Confidence 54 566666654 3 788999999999999986432 11 11112233456
Q ss_pred EEEEecCCCCE----EEEEEcCCeEEEEECCCc---eeEEEEeecCc------------eeEEEEEeeCCCEEEEEEccC
Q 038577 268 TACDYHRGLDM----VVVGFSNGVFGLYQMPDF---VCIHLLSISRE------------KITTAVFNELGNWLVFGCAKL 328 (860)
Q Consensus 268 ~~~~~~~~~~~----l~~~~~~g~i~~~~~~~~---~~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~~~~ 328 (860)
.++.+.++... +++++.+|.|++|++... .....+..+.. .+.+++|+|+++++++++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d- 294 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSD- 294 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETT-
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccC-
Confidence 66666665544 999999999999999876 55666776665 69999999999999988776
Q ss_pred CcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 038577 329 GQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTV 378 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 378 (860)
|.|++||+.+++.+..+..|...|.+++|+|+|++|++++.|+..+.|++
T Consensus 295 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 295 GRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp SCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred CeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 99999999999999999999999999999999999999999876555543
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=8.9e-32 Score=284.66 Aligned_cols=292 Identities=19% Similarity=0.241 Sum_probs=242.3
Q ss_pred ECCCceeEEEEeecCceeEEEEEeeC---CCEEEEEEccCCcEEEEEccC-ceEE-EEecCcccCeEEEEEcCCCCEEEE
Q 038577 292 QMPDFVCIHLLSISREKITTAVFNEL---GNWLVFGCAKLGQLLVWEWRS-ESYI-LKQQGHYFDVNCLAYSPDSQLLAT 366 (860)
Q Consensus 292 ~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~~~g~i~v~d~~~-~~~~-~~~~~~~~~v~~~~~s~~~~~l~~ 366 (860)
+....+.+..+..|...|.+++|+|+ |+.+++++.+ |.|++||+.+ +... ..+.+|...|.+++|+|++++|++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWA-NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETT-SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCC-CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 44566677788899999999999999 5777777665 9999999997 4444 667889999999999999999999
Q ss_pred EeCCCcEEEEECCCCeeEEEeecCCCceEEEEE--eeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECC
Q 038577 367 GADDNKVKVWTVSSGFCFVTFTEHTNAVTALHF--MANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQ 444 (860)
Q Consensus 367 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~--~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (860)
++.||.|++||+.++.... +..|...|.+++| +++++++++++.||.|++||+.+++....+..+. .+.++.+.
T Consensus 104 ~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~~- 179 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE--RCYCADVI- 179 (368)
T ss_dssp EETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS--CEEEEEEE-
T ss_pred EcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC--CceEEEec-
Confidence 9999999999999988776 5579999999999 8899999999999999999999999888887654 44555554
Q ss_pred CCCEEEEEecCCCeEEEEECCCCceEEEe--cCcccCeEEEEEcCCCCE----EEEEeCCCcEEEEEccCC---cceeEE
Q 038577 445 SGEVICAGTLDSFEIFVWSMKTGRLLDIL--SGHEGPVHGLVFSPTNAT----LASSSWDKTVRLWNVFEG---KGSVES 515 (860)
Q Consensus 445 ~~~~l~~~~~~~~~i~v~d~~~~~~~~~~--~~h~~~v~~l~~s~~~~~----l~s~~~dg~i~iwd~~~~---~~~~~~ 515 (860)
+..+++++.++ .+.+|++......... ..+...+.++++.++... +++++.||.|++||+... .....+
T Consensus 180 -~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 180 -YPMAVVATAER-GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp -TTEEEEEEGGG-CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred -CCeeEEEeCCC-cEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee
Confidence 45777888887 8999999876544332 234456677777666554 999999999999999887 334455
Q ss_pred cccCC------------CeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCc
Q 038577 516 FPHTH------------DVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKC 583 (860)
Q Consensus 516 ~~~~~------------~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (860)
..|.. .|++++|+|++++|++++.||.|++||+.+++++..+.+|.. .
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------~ 317 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ--------------------P 317 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS--------------------C
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC--------------------C
Confidence 55554 799999999999999999999999999999999999887765 5
Q ss_pred EEEEEEecCCCEEEEecCCCeEEEEEC
Q 038577 584 FTTLCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 584 i~~l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
|++++|+|+|++|++++.|+..+.|++
T Consensus 318 v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 318 ISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ceEEEECCCCCeEEEEecccccccccc
Confidence 999999999999999999875554443
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.6e-31 Score=273.90 Aligned_cols=310 Identities=11% Similarity=0.082 Sum_probs=224.0
Q ss_pred EEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEE-EEEe
Q 038577 290 LYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLL-ATGA 368 (860)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~ 368 (860)
+|++.+.+.+.....|...|.+++|+|||+.+++++. ..+++|+..++........+ .+..+++.++++.+ ++++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~--~~~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTL--KSFEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECS--SEEEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcC--CEEEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEEC
Confidence 4555566667777888999999999999999887764 35789999988776654332 47888999988887 4677
Q ss_pred CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc-ceeeEeeCCCCCcEEEEEECCCCC
Q 038577 369 DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY-RNFRTFTTPSSRQFVSLASDQSGE 447 (860)
Q Consensus 369 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 447 (860)
.|+.|++||..+++.+..+. +...|.++.++++. ++++ .|+.|++||+.+. +.+..+.. ....+++++ .
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~ 148 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--G 148 (355)
T ss_dssp STTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--T
T ss_pred CccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--c
Confidence 78999999999999998886 67799999998774 4444 4789999999987 66665554 334556666 6
Q ss_pred EEEEE--ecCCCeEEEEECCCCc----------------eEEEecCcccCeEEEEEcCCCCEEEEEeCCCc-EEEEEccC
Q 038577 448 VICAG--TLDSFEIFVWSMKTGR----------------LLDILSGHEGPVHGLVFSPTNATLASSSWDKT-VRLWNVFE 508 (860)
Q Consensus 448 ~l~~~--~~~~~~i~v~d~~~~~----------------~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~-i~iwd~~~ 508 (860)
+++++ +.++ .|++||+.+++ .+..+.+|.++|++++|+|++++|++++.||+ |++||+.+
T Consensus 149 ~la~~sg~~~g-~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 149 LLVYSNEFNLG-QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp EEEEEESSCTT-CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred EEEEeCCCcCc-EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 66664 5555 99999999865 26788999999999999999999999999998 99999999
Q ss_pred CcceeEEc-c-cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeE--EEeccc-ccCCCccccccccccccCCCCc
Q 038577 509 GKGSVESF-P-HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMY--TIEGRR-DISGGRLMTDRRSAANSSSGKC 583 (860)
Q Consensus 509 ~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 583 (860)
++.+..+. + |...|.+++|+|+|++|++++.|+.|++||+.++.... .+.... ......................
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVR 307 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCC
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCC
Confidence 98777776 4 99999999999999999999999999999998764221 111100 0000000000000011111223
Q ss_pred EEEEEEecCCCEEEEecCCCeEEEEECCCce
Q 038577 584 FTTLCYSADGSYILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 584 i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~ 614 (860)
...++|++||++|++++.||.+++|++..++
T Consensus 308 ~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 308 GCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred ceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 4679999999999999999999999987654
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.5e-29 Score=267.96 Aligned_cols=325 Identities=13% Similarity=0.145 Sum_probs=257.0
Q ss_pred EEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEE
Q 038577 278 MVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAY 357 (860)
Q Consensus 278 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 357 (860)
.+++++.++.|++||+.+++.+..+..+. .+.+++|+|+|+.+++++..++.|++||+.+++.+..+..+. .+.+++|
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~ 81 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV 81 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEE
Confidence 57788899999999999999998888765 589999999999998777667999999999999888876655 8999999
Q ss_pred cCCCCEEEEE-eCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEE-EEEeCCCcEEEEEccccceeeEeeCCCCC
Q 038577 358 SPDSQLLATG-ADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSL-LSASLDGTVRAWDLFRYRNFRTFTTPSSR 435 (860)
Q Consensus 358 s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~ 435 (860)
+|++++++++ +.++.|++||+.+++.+..+.. ...+.+++|+|+++.+ ++++.|+.|++||+.+++....+... .
T Consensus 82 spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~ 158 (391)
T 1l0q_A 82 SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG--R 158 (391)
T ss_dssp CTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--S
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC--C
Confidence 9999988654 4679999999999998888764 4578999999999877 68888999999999999888777654 3
Q ss_pred cEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEe---CCCcEEEEEccCCcce
Q 038577 436 QFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSS---WDKTVRLWNVFEGKGS 512 (860)
Q Consensus 436 ~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~ 512 (860)
.+..++++|+++.+++++..++.|++||+++++....+. +...+.+++|+|+++++++++ .++.|++||+.+++..
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 568999999999886554444499999999998888776 556789999999999999888 6899999999988755
Q ss_pred eEEcccCCCeEEEEEeeCCCEE-EEEeCCCeEEEEeCCCCceeEEEecccccCC-CccccccccccccCCCCcEEEEEEe
Q 038577 513 VESFPHTHDVLTVVYRPDGRQL-ACSTLDGQIHFWDPLNGELMYTIEGRRDISG-GRLMTDRRSAANSSSGKCFTTLCYS 590 (860)
Q Consensus 513 ~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~s 590 (860)
..+..+ ..+.+++|+|++++| ++++.|+.|++||+.+++.+..+..+..... +..... ...+.......|+
T Consensus 238 ~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~fs 310 (391)
T 1l0q_A 238 ARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGS------IPVQPVYPSADFK 310 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEE------CSSCCCCCBCCEE
T ss_pred EEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeec------ccccccccccccc
Confidence 554444 468999999999987 5668899999999999999998877653211 100000 0000111122233
Q ss_pred cCC----------CEEEEecCCCeEEEEECCCceE
Q 038577 591 ADG----------SYILAGGSSKYICMYDVADQVL 615 (860)
Q Consensus 591 ~~g----------~~l~~~~~dg~v~vwd~~~~~~ 615 (860)
.+. ..+...+.|..+++|++.+|..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 311 SNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp ESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred cccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 222 3455666788999999988864
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.9e-30 Score=278.12 Aligned_cols=279 Identities=14% Similarity=0.111 Sum_probs=231.2
Q ss_pred ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce---EEEEecC------------------------------------
Q 038577 307 EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES---YILKQQG------------------------------------ 347 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~---~~~~~~~------------------------------------ 347 (860)
.++.+++|+++|+.++++. . +.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~-~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-K-NCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-T-TEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-C-CeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4788999999999666554 3 899999999887 5544432
Q ss_pred ------------------cccCeEEEEEcCCCCEE-EEEeCCCcEEEEECC--CCeeEEEee--cCCCceEEEEEeeCCC
Q 038577 348 ------------------HYFDVNCLAYSPDSQLL-ATGADDNKVKVWTVS--SGFCFVTFT--EHTNAVTALHFMANNH 404 (860)
Q Consensus 348 ------------------~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~i~~~~~~~ 404 (860)
|...|.+++|+|++++| ++++.||.|++||+. ++..+..+. .|...|.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 33369999999999996 899999999999999 888888876 5678999999999999
Q ss_pred EEEEEeCCCcEEEEEccccceee----EeeCCCCCcEEEEEECCC---CCEEEEEecCCCeEEEEECCCCceEEE-ecCc
Q 038577 405 SLLSASLDGTVRAWDLFRYRNFR----TFTTPSSRQFVSLASDQS---GEVICAGTLDSFEIFVWSMKTGRLLDI-LSGH 476 (860)
Q Consensus 405 ~l~s~~~dg~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~i~v~d~~~~~~~~~-~~~h 476 (860)
+|++++.+|.+++|++.+++... .+. .+...+.+++|+|+ ++++++++.|+ .|++||+.+++.+.. +.+|
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d~-~i~vwd~~~~~~~~~~~~~h 240 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRDE-HIKISHYPQCFIVDKWLFGH 240 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETTS-CEEEEEESCTTCEEEECCCC
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCCC-cEEEEECCCCceeeeeecCC
Confidence 99999999999999998876543 333 34468999999999 99999999998 999999999998877 5689
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEc-------------------------ccCCCeEEEEEeeCC
Q 038577 477 EGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESF-------------------------PHTHDVLTVVYRPDG 531 (860)
Q Consensus 477 ~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------------------~~~~~v~~~~~s~~~ 531 (860)
...|.+++|+ ++++|++++.|+.|++||+.+++....+. .....+.+++|+|++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 9999999999 99999999999999999999988655554 224578999999999
Q ss_pred CEEEEEe-CCCeEEEEeC--CCC---ceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecC----
Q 038577 532 RQLACST-LDGQIHFWDP--LNG---ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGS---- 601 (860)
Q Consensus 532 ~~l~~~~-~dg~i~iwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~---- 601 (860)
++|++++ .++.|++|++ .++ +.+..+..+. .|.+++|+|++.++++++.
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~---------------------~v~~~~~~~~~~~v~~~~~~~~~ 378 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY---------------------NVISLSAHNDEFQVTLDNKESSG 378 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS---------------------CEEEEEEETTEEEEEECCTTCCS
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC---------------------ceEEEEecCCcEEEEEecccCCC
Confidence 9999999 8999999999 665 6666666653 4899999996544444443
Q ss_pred --CCeEEEEECC
Q 038577 602 --SKYICMYDVA 611 (860)
Q Consensus 602 --dg~v~vwd~~ 611 (860)
+..|.+|.+.
T Consensus 379 ~~~~~i~v~~~~ 390 (450)
T 2vdu_B 379 VQKNFAKFIEYN 390 (450)
T ss_dssp SCCCSEEEEEEE
T ss_pred CCCcceEEEEEE
Confidence 4557888764
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.98 E-value=3e-29 Score=271.42 Aligned_cols=322 Identities=11% Similarity=0.066 Sum_probs=259.2
Q ss_pred CccCeeEEE---EcCCCCEEEEEc--------------CCC--cEEEEEcccC--eEEEEeecCCceeEEEECCCCCEEE
Q 038577 51 SSSNICRIA---VSPDGTFLLTVD--------------ENQ--RCHFINLHCH--VVLHRVRFKYPVNAILFSPNGKYIA 109 (860)
Q Consensus 51 h~~~v~~va---~spdg~~la~~~--------------~d~--~i~vwd~~~~--~~~~~~~~~~~v~~~~fspdg~~la 109 (860)
....+..++ |+|+++.++..+ .++ .|..||..++ +.+..+.....+.+++|+|++.+++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 138 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAI 138 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEE
Confidence 344567777 888877665432 223 4455555445 6667777677788999999777777
Q ss_pred EE-eCCeEEEEeCCCCCcccceeEEEE-----EeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccce
Q 038577 110 VG-TGKLVQIWRSPGFKKEVFAFELIR-----TLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPF 183 (860)
Q Consensus 110 ~~-~~~~i~iwd~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~ 183 (860)
++ .++.|++||+.+++. .. .+.+|.+.|.+++|+|+++++++++.|+.|++||+.++ ....
T Consensus 139 ~~~~~~~i~~~d~~~g~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~------~~~~ 205 (433)
T 3bws_A 139 PLLEDEGMDVLDINSGQT-------VRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL------AYKA 205 (433)
T ss_dssp EBTTSSSEEEEETTTCCE-------EEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC------CEEE
T ss_pred EeCCCCeEEEEECCCCeE-------eeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc------eEEE
Confidence 66 567899999998873 33 34588899999999999999999999999999999887 5567
Q ss_pred EeecCCCcEEEEEEccCCCCCccceEE-EEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccC
Q 038577 184 LLLGHRDSVVGCFFSVDKKTDKVNRIY-TIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQ 262 (860)
Q Consensus 184 ~~~~h~~~i~~~~~~~~~~~~~~~~l~-s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (860)
.+..|...+.+++|+|+++ .++ +++.|+.|++||+.++.. ...+ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~i~~~d~~~~~~----------------------------~~~~-~ 251 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRD-----LVYCSNWISEDISVIDRKTKLE----------------------------IRKT-D 251 (433)
T ss_dssp EEECSSSSEEEEEEETTTT-----EEEEEETTTTEEEEEETTTTEE----------------------------EEEC-C
T ss_pred EEcCCCCCeeEEEEcCCCC-----EEEEEecCCCcEEEEECCCCcE----------------------------EEEe-c
Confidence 7778999999999999998 775 555899999999876421 1111 1
Q ss_pred CCCceEEEEecCCCCEEEEEE--------cCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEE
Q 038577 263 APSKVTACDYHRGLDMVVVGF--------SNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVW 334 (860)
Q Consensus 263 ~~~~v~~~~~~~~~~~l~~~~--------~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~ 334 (860)
....+.+++|+|+++.+++++ .+|.|++||+.+++....+. +...+..++|+|+++.+++++..++.+.+|
T Consensus 252 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 252 KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 234589999999999999888 48899999999888776653 344788999999999998887888999999
Q ss_pred EccCceEEEEecCcccCeEEEEEcCCCCEEEEEeC---------------CCcEEEEECCCCeeEEEeecCCCceEEEEE
Q 038577 335 EWRSESYILKQQGHYFDVNCLAYSPDSQLLATGAD---------------DNKVKVWTVSSGFCFVTFTEHTNAVTALHF 399 (860)
Q Consensus 335 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 399 (860)
|+.+++....+. +...+.+++|+|+|+++++++. ||.|++||+.+++.+..+.. ...+.+++|
T Consensus 331 d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~ 408 (433)
T 3bws_A 331 DLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDV 408 (433)
T ss_dssp ETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEE
T ss_pred ECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEE
Confidence 999998887765 6677999999999999988876 57999999999999888875 567999999
Q ss_pred eeCCCEEEEEeC-CCcEEEEEccc
Q 038577 400 MANNHSLLSASL-DGTVRAWDLFR 422 (860)
Q Consensus 400 ~~~~~~l~s~~~-dg~i~~wd~~~ 422 (860)
+|++++|++++. |+.|++|++..
T Consensus 409 s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 409 SPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCEEEEEETTTTEEEEEEETT
T ss_pred cCCCCEEEEEECCCCeEEEEEecC
Confidence 999999988875 99999999853
No 115
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=5.5e-31 Score=281.41 Aligned_cols=284 Identities=14% Similarity=0.203 Sum_probs=238.4
Q ss_pred ceEEEEecCCCCEEE-EEEcCCeEEEEECCCce----eEEEEeecCceeEEEEEee-CCCEEEEEEccCCcEEEEEccCc
Q 038577 266 KVTACDYHRGLDMVV-VGFSNGVFGLYQMPDFV----CIHLLSISREKITTAVFNE-LGNWLVFGCAKLGQLLVWEWRSE 339 (860)
Q Consensus 266 ~v~~~~~~~~~~~l~-~~~~~g~i~~~~~~~~~----~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~~~g~i~v~d~~~~ 339 (860)
....++++|+...++ +++.+|.|++|++.... ....+..|...|.+++|+| +++.+++++.+ |.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-g~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED-CTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT-SEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC-CeEEEEEccCC
Confidence 344578888776554 47889999999986542 3345677899999999999 88888888765 99999999987
Q ss_pred -------eEEEEecCcccCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEe--ecCCCceEEEEEeeCCCEEEEE
Q 038577 340 -------SYILKQQGHYFDVNCLAYSPDS-QLLATGADDNKVKVWTVSSGFCFVTF--TEHTNAVTALHFMANNHSLLSA 409 (860)
Q Consensus 340 -------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~i~~~~~~~~l~s~ 409 (860)
..+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++++|+++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 5677788999999999999998 69999999999999999999999999 7899999999999999999999
Q ss_pred eCCCcEEEEEccccceeeEe-eCCCCCcEEEEEECCCCCEEEEE---ecCCCeEEEEECCCCce-EEEe-cCcccCeEEE
Q 038577 410 SLDGTVRAWDLFRYRNFRTF-TTPSSRQFVSLASDQSGEVICAG---TLDSFEIFVWSMKTGRL-LDIL-SGHEGPVHGL 483 (860)
Q Consensus 410 ~~dg~i~~wd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~i~v~d~~~~~~-~~~~-~~h~~~v~~l 483 (860)
+.||.|++||+++++....+ ..+....+.++.++|++.+++++ +.++ .|++||+++++. +... ..|...+.++
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER-QVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE-EEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc-eEEEEcCccccCCceEEeccCCCceeEE
Confidence 99999999999999988888 44444458899999999999998 5666 999999998764 3332 2577889999
Q ss_pred EEcCCCCEEEE-EeCCCcEEEEEccCCcc-eeEEc--ccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCce
Q 038577 484 VFSPTNATLAS-SSWDKTVRLWNVFEGKG-SVESF--PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 484 ~~s~~~~~l~s-~~~dg~i~iwd~~~~~~-~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
+|+|++++|++ ++.||.|++||+.+++. ...+. .+...+.+++|+|++.++++ .++.+++|++.+++.
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 99999999875 45799999999998874 33333 35689999999999998775 467999999987653
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=2.4e-29 Score=246.52 Aligned_cols=304 Identities=13% Similarity=0.099 Sum_probs=217.4
Q ss_pred EEEEeeccCCC----eEEEEEcCCCC---eEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCc
Q 038577 133 LIRTLADCNDK----VTALNWSPDSN---YLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDK 205 (860)
Q Consensus 133 ~~~~~~~h~~~----v~~l~~s~d~~---~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~ 205 (860)
++..++...+. +.++.|-..|- .++++++ ..|++|+....... +..+++.+|..+|..+.+.||..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~--- 99 (356)
T 2w18_A 27 LVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQW---EKLYTWHFAEVPVLQIVPVPDVY--- 99 (356)
T ss_dssp EEEEECCCCSSCEEEEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBE---EEEEEEECCSSCEEEECCCTTCC---
T ss_pred eeehhcCCCCCeEEEEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccc---eeeEEEeccCceeEEEEEcCccc---
Confidence 44555544332 45666655442 5666665 59999999876222 57899999999999999999887
Q ss_pred cceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCC----CCEEEE
Q 038577 206 VNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRG----LDMVVV 281 (860)
Q Consensus 206 ~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~ 281 (860)
-|+...-. + -+...|.+++++|+ ++.++.
T Consensus 100 --~~~~~~~~------~---------------------------------------~~~~~v~sla~spd~~~~~~~l~s 132 (356)
T 2w18_A 100 --NLVCVALG------N---------------------------------------LEIREIRALFCSSDDESEKQVLLK 132 (356)
T ss_dssp --SCEEEEEC------S---------------------------------------SSEEEEEEECC------CCEEEEE
T ss_pred --ceeeeeec------c---------------------------------------ccccceEEEEECCCccccccEEEe
Confidence 33333200 0 12346899999999 999998
Q ss_pred EEcCCeEEEEECCCceeEEE-EeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc-cCceEEEEecCcccCeEEEEEcC
Q 038577 282 GFSNGVFGLYQMPDFVCIHL-LSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW-RSESYILKQQGHYFDVNCLAYSP 359 (860)
Q Consensus 282 ~~~~g~i~~~~~~~~~~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~-~~~~~~~~~~~~~~~v~~~~~s~ 359 (860)
++.+ +.+|++++++.+.. ..++ ++.|++|++ .+++.+..+..|...++.++|++
T Consensus 133 ~g~~--~~v~~l~~g~lv~ss~~g~----------------------d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 133 SGNI--KAVLGLTKRRLVSSSGTLS----------------------DQQVEVMTFAEDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEE--EEEEEETTTEEEEEESSST----------------------TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE
T ss_pred CCCe--EEEEecCCCcEEEecccCC----------------------CCcEEEEEECCCCceeeeeccCCCceeeEEeec
Confidence 7754 67787755544433 1223 367777777 33666666678888999999999
Q ss_pred ---CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCC---ceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCC
Q 038577 360 ---DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTN---AVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPS 433 (860)
Q Consensus 360 ---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~ 433 (860)
++..|++++.|++|++||+.+++++.++.+|.. .+.+++|+|++.++++++.+.. +|+
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~--~w~-------------- 252 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA--KES-------------- 252 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----------------------
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC--cce--------------
Confidence 789999999999999999999999999987543 6778899999998888776433 243
Q ss_pred CCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEe-----cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q 038577 434 SRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDIL-----SGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE 508 (860)
Q Consensus 434 ~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~-----~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 508 (860)
+++|+.|+ +|++||..+++.+..+ .+|...+.+..++ +.++|+++.|++|+|||+.+
T Consensus 253 ---------------laSGs~D~-tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 253 ---------------ESLRSPVF-QLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp --------------------CCE-EEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred ---------------eeccCCCc-EEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCC
Confidence 34566666 8999999988887665 4676665555554 88999999999999999999
Q ss_pred CcceeEEcccCCCeE-EEEEeeCCCEEEEEeCCCeEEEEeC
Q 038577 509 GKGSVESFPHTHDVL-TVVYRPDGRQLACSTLDGQIHFWDP 548 (860)
Q Consensus 509 ~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~iwd~ 548 (860)
++....+.+|...+. .++|||||++|++|+.|++|+|||+
T Consensus 315 Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 315 GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 998888878877655 5899999999999999999999985
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-29 Score=275.44 Aligned_cols=281 Identities=12% Similarity=0.062 Sum_probs=233.1
Q ss_pred CceEEEEecCCCCEEEEEEcCCeEEEEECCCce---eEEEEeecC-----------------------------------
Q 038577 265 SKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV---CIHLLSISR----------------------------------- 306 (860)
Q Consensus 265 ~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~---~~~~~~~~~----------------------------------- 306 (860)
.++.+++|+|+|+++++ +.++.|++||+.+++ .+..+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~-~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFA-IIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEE-EETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEE-EeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 36889999999995554 468899999998888 555554322
Q ss_pred -------------------ceeEEEEEeeCCCEEEEEEccCCcEEEEEcc--CceEEEEec--CcccCeEEEEEcCCCCE
Q 038577 307 -------------------EKITTAVFNELGNWLVFGCAKLGQLLVWEWR--SESYILKQQ--GHYFDVNCLAYSPDSQL 363 (860)
Q Consensus 307 -------------------~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~--~~~~~~~~~--~~~~~v~~~~~s~~~~~ 363 (860)
..|.+++|+|+++.|++++..+|.|++||+. ++..+..+. .|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 2699999999999986666666999999999 777777765 56788999999999999
Q ss_pred EEEEeCCCcEEEEECCCCeeEE----EeecCCCceEEEEEeeC---CCEEEEEeCCCcEEEEEccccceeeEeeCCCCCc
Q 038577 364 LATGADDNKVKVWTVSSGFCFV----TFTEHTNAVTALHFMAN---NHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQ 436 (860)
Q Consensus 364 l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~i~~~~~---~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~ 436 (860)
|++|+.+|.|++|++.++.... .+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++....+...+...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998776543 77789999999999999 9999999999999999999998888877677789
Q ss_pred EEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCc-------------------------ccCeEEEEEcCCCCE
Q 038577 437 FVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGH-------------------------EGPVHGLVFSPTNAT 491 (860)
Q Consensus 437 ~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h-------------------------~~~v~~l~~s~~~~~ 491 (860)
+.+++|+ +++++++++.|+ .|++||+.+++.+..+..+ ...|.+++|+|++++
T Consensus 244 v~~~~~s-d~~~l~s~~~d~-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDD-KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp EEEEEEC-STTEEEEEESSS-EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred eEEEEEC-CCCEEEEEeCCC-eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 9999999 999999999998 9999999999988887632 357899999999999
Q ss_pred EEEEe-CCCcEEEEEc--cCC---cceeEEcccCCCeEEEEEeeCCCEEEEEeC------CCeEEEEeCC
Q 038577 492 LASSS-WDKTVRLWNV--FEG---KGSVESFPHTHDVLTVVYRPDGRQLACSTL------DGQIHFWDPL 549 (860)
Q Consensus 492 l~s~~-~dg~i~iwd~--~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~iwd~~ 549 (860)
+++++ .|+.|++|++ ..+ .....+..+ ..+.+++|+|++.++++++. +..|.+|.+.
T Consensus 322 l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 322 VAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 99999 8999999999 554 333344455 88999999996544443332 4457888654
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=8.4e-29 Score=263.92 Aligned_cols=277 Identities=12% Similarity=0.132 Sum_probs=234.8
Q ss_pred CEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeeEEEeecCCCceEEE
Q 038577 319 NWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLL-ATGADDNKVKVWTVSSGFCFVTFTEHTNAVTAL 397 (860)
Q Consensus 319 ~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i 397 (860)
+++++++..++.|++||+.+++.+..+..|. .+.+++|+|+++.+ ++++.|+.|++||+.+++.+..+..+. .+.++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~ 79 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGV 79 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-Cccce
Confidence 3566666777999999999999988887765 48999999999977 667789999999999999998887555 89999
Q ss_pred EEeeCCCEEEEE-eCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEE-EecCCCeEEEEECCCCceEEEecC
Q 038577 398 HFMANNHSLLSA-SLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICA-GTLDSFEIFVWSMKTGRLLDILSG 475 (860)
Q Consensus 398 ~~~~~~~~l~s~-~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~i~v~d~~~~~~~~~~~~ 475 (860)
+|+|++++++.+ +.++.|++||+.+++....+... ..+.+++++|+++.+++ +..++ .|++||+.+++.+..+..
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~-~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGDK-TVSVINTVTKAVINTVSV 156 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTTT-EEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCCC-EEEEEECCCCcEEEEEec
Confidence 999999987655 46799999999999888777654 36799999999998854 44455 999999999999988876
Q ss_pred cccCeEEEEEcCCCCEE-EEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEe---CCCeEEEEeCCCC
Q 038577 476 HEGPVHGLVFSPTNATL-ASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACST---LDGQIHFWDPLNG 551 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~i~iwd~~~~ 551 (860)
| ..+.+++|+|+++++ ++++.|+.|++||+.+++.. ....+...+.+++|+|++++|++++ .++.|++||+.++
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI-DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-EEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE-EEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 5 456999999999987 57778899999999988643 4445667899999999999999988 6899999999999
Q ss_pred ceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEE-EEecCCCeEEEEECCCceEEEEEeecc
Q 038577 552 ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYI-LAGGSSKYICMYDVADQVLLRRFQITH 623 (860)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l-~~~~~dg~v~vwd~~~~~~~~~~~~~~ 623 (860)
+.+..+..+.. +.+++|+|+|++| ++++.|+.|++||+.+++.++.+....
T Consensus 235 ~~~~~~~~~~~---------------------~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~ 286 (391)
T 1l0q_A 235 KITARIPVGPD---------------------PAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGK 286 (391)
T ss_dssp EEEEEEECCSS---------------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred eEEEEEecCCC---------------------ccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCc
Confidence 99888877653 7899999999988 567889999999999999998887553
No 119
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2.6e-29 Score=275.38 Aligned_cols=344 Identities=13% Similarity=0.075 Sum_probs=273.2
Q ss_pred EecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEc--cCceEEEEecCc
Q 038577 271 DYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEW--RSESYILKQQGH 348 (860)
Q Consensus 271 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~--~~~~~~~~~~~~ 348 (860)
.++|++..++++..++.|.+||..+++.+..+..+.. +..++|+|||+++++++.+ +.|.+||+ .+++.+..+..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~~- 220 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIKI- 220 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEEC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEec-
Confidence 3789998999999999999999999999998885544 8899999999999999887 99999999 88888887764
Q ss_pred ccCeEEEEEcC----CCCEEEEEeC-CCcEEEEECCCCeeEEEeecC-----------CCceEEEEEeeCCCE-EEEEeC
Q 038577 349 YFDVNCLAYSP----DSQLLATGAD-DNKVKVWTVSSGFCFVTFTEH-----------TNAVTALHFMANNHS-LLSASL 411 (860)
Q Consensus 349 ~~~v~~~~~s~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~i~~~~~~~~-l~s~~~ 411 (860)
...+..++|+| +|+++++++. +++|.+||..+++++..+..+ ...+.++.++|++.. +++...
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45579999999 9999999885 899999999999998887642 237899999997754 566778
Q ss_pred CCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC----cccCeEEEEEcC
Q 038577 412 DGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG----HEGPVHGLVFSP 487 (860)
Q Consensus 412 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~----h~~~v~~l~~s~ 487 (860)
++.|.+||+.+.+.......+....+..++|+|+|+++++++...+.|.+||..+++++..+.. |.+....+ ++|
T Consensus 301 ~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p 379 (543)
T 1nir_A 301 TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHP 379 (543)
T ss_dssp TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EET
T ss_pred CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCC
Confidence 8999999998876554222223445678999999998887766444999999999999988874 65544444 577
Q ss_pred C-CCEEEEEe-CCCcEEEEEccC-------CcceeEEcccCCCeEEEEEeeCCCEEEEEe-------CCCeEEEEeCCCC
Q 038577 488 T-NATLASSS-WDKTVRLWNVFE-------GKGSVESFPHTHDVLTVVYRPDGRQLACST-------LDGQIHFWDPLNG 551 (860)
Q Consensus 488 ~-~~~l~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~iwd~~~~ 551 (860)
+ +..++++. .|++|.+||+.+ .+.+..+..|...+..++++|+|++|++++ .+++|.+||+.++
T Consensus 380 ~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 380 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 7 66677765 589999999988 676777778888889999999999999987 2679999999999
Q ss_pred cee-EEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEe-----cCCCeEEEEECCCceEEEEEeecccc
Q 038577 552 ELM-YTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAG-----GSSKYICMYDVADQVLLRRFQITHNL 625 (860)
Q Consensus 552 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~-----~~dg~v~vwd~~~~~~~~~~~~~~~~ 625 (860)
+.. ..+.... ......+++.+..+.|+|||++|+++ +.++.|.|||..++++++.++..+-.
T Consensus 460 ~~~~~~~~v~~------------~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~~~ 527 (543)
T 1nir_A 460 DAKYQVLPIAE------------WADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLI 527 (543)
T ss_dssp TSCCEEECHHH------------HHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTTCC
T ss_pred CCCeEEeechh------------hcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCCCcc
Confidence 876 4432211 00011224569999999999998866 24799999999999999988765544
Q ss_pred cccce
Q 038577 626 SLDGV 630 (860)
Q Consensus 626 ~~~~~ 630 (860)
.+.|.
T Consensus 528 ~p~g~ 532 (543)
T 1nir_A 528 TPTGK 532 (543)
T ss_dssp SEEEE
T ss_pred CCCee
Confidence 44443
No 120
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.3e-29 Score=264.58 Aligned_cols=305 Identities=12% Similarity=0.134 Sum_probs=207.5
Q ss_pred EEEcccCeEEEEee-cCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeE
Q 038577 78 FINLHCHVVLHRVR-FKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYL 156 (860)
Q Consensus 78 vwd~~~~~~~~~~~-~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l 156 (860)
||++.+.+.+.... |...|.+++|+|||++||++.+..+++|+..+++. ... .+...+..+++.++++.+
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~ 73 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAH-------IMS--QEMRHLSKVRMLHRTNYV 73 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEE-------EEE--EECSCCCEEEECTTSSEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcce-------eee--eecCCeEEEEEcCCCCEE
Confidence 56677777776555 89999999999999999999888899999886542 222 223358889999998887
Q ss_pred -EEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccC
Q 038577 157 -LVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETME 235 (860)
Q Consensus 157 -~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~ 235 (860)
++++.|+.|++||..++ .....+. |...|.++.|+++ .++++ .|+.+++||+.+....
T Consensus 74 ~~~~~~d~~v~iWd~~~~------~~~~~~~-~~~~v~~v~~~~~-------~~~~~-~~~~i~i~d~~~~~~~------ 132 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKK------QDVSRIK-VDAPVKDLFLSRE-------FIVVS-YGDVISVFKFGNPWKR------ 132 (355)
T ss_dssp EEECSSTTEEEEEETTTT------EEEEEEE-CSSCEEEEEECSS-------EEEEE-ETTEEEEEESSTTCCB------
T ss_pred EEEECCccEEEEEECCCC------cEEEEEE-CCCceEEEEEcCC-------EEEEE-EcCEEEEEECCCCcee------
Confidence 46778899999999887 4455554 6778999999876 34433 3788999998864110
Q ss_pred CCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEE--EEcCCeEEEEECCCceeEEEEeecCceeEEEE
Q 038577 236 DSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVV--GFSNGVFGLYQMPDFVCIHLLSISREKITTAV 313 (860)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~ 313 (860)
...+.. ....+++++ ..+++ |+.+|.|++||+.++..........
T Consensus 133 ---------------------~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~------- 179 (355)
T 3vu4_A 133 ---------------------ITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV------- 179 (355)
T ss_dssp ---------------------SSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------
T ss_pred ---------------------eEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccc-------
Confidence 000000 223344455 45554 4666777777775544321110000
Q ss_pred EeeCCCEEEEEEccCCcEEEEEccCceE-EEEecCcccCeEEEEEcCCCCEEEEEeCCCc-EEEEECCCCeeEEEee-c-
Q 038577 314 FNELGNWLVFGCAKLGQLLVWEWRSESY-ILKQQGHYFDVNCLAYSPDSQLLATGADDNK-VKVWTVSSGFCFVTFT-E- 389 (860)
Q Consensus 314 ~s~~~~~l~~~~~~~g~i~v~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~- 389 (860)
+...... +..+.+|...|.+++|+|+|++|++|+.||+ |++||+.+++.+..+. +
T Consensus 180 ---------------------~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 180 ---------------------QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp ----------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT
T ss_pred ---------------------cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 0000012 4566899999999999999999999999998 9999999999999998 5
Q ss_pred CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeE----------------------eeCCCCCcEEEEEECCCCC
Q 038577 390 HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRT----------------------FTTPSSRQFVSLASDQSGE 447 (860)
Q Consensus 390 ~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~ 447 (860)
|...|.+++|+|++++|++++.|+.|++||+......+. +..........++|+++++
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~ 318 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS 318 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC
Confidence 999999999999999999999999999999976532111 1111112236689999999
Q ss_pred EEEEEecCCCeEEEEECCCC
Q 038577 448 VICAGTLDSFEIFVWSMKTG 467 (860)
Q Consensus 448 ~l~~~~~~~~~i~v~d~~~~ 467 (860)
.+++++.|+ .+++|++..+
T Consensus 319 ~l~~~~~dg-~~~~~~~~~~ 337 (355)
T 3vu4_A 319 LVVVWPHTR-MIETFKVVFD 337 (355)
T ss_dssp EEEEETTTT-EEEEEEEEEE
T ss_pred EEEEEeCCC-eEEEEEEEcC
Confidence 999999998 9999997643
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.6e-29 Score=271.99 Aligned_cols=312 Identities=13% Similarity=0.213 Sum_probs=246.4
Q ss_pred EEEeecCCceeEEEECCCC----------CEEEEE-----eCCeEEEEeCC--C--------------CCc----cccee
Q 038577 87 LHRVRFKYPVNAILFSPNG----------KYIAVG-----TGKLVQIWRSP--G--------------FKK----EVFAF 131 (860)
Q Consensus 87 ~~~~~~~~~v~~~~fspdg----------~~la~~-----~~~~i~iwd~~--~--------------~~~----~~~~~ 131 (860)
+......-|..++.|.|+. .++++| ..+.|.++++. . ++. ...+.
T Consensus 39 ~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~ 118 (430)
T 2xyi_A 39 VMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGK 118 (430)
T ss_dssp EEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------C
T ss_pred HhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCc
Confidence 3444456788999999976 467777 23577777643 0 000 00111
Q ss_pred EEEEEeeccCCCeEEEEEcCC-CCeEEEeecCCeEEEEeecccccCc----ccccceEeecCCCcEEEEEEccCCCCCcc
Q 038577 132 ELIRTLADCNDKVTALNWSPD-SNYLLVGSKDLAVRLFYVKEKLKGI----HTNKPFLLLGHRDSVVGCFFSVDKKTDKV 206 (860)
Q Consensus 132 ~~~~~~~~h~~~v~~l~~s~d-~~~l~s~~~dg~v~vwd~~~~~~~~----~~~~~~~~~~h~~~i~~~~~~~~~~~~~~ 206 (860)
........|.+.|++++|+|+ +.+|++++.||.|++|++....... .......+.+|...|.+++|+|++..
T Consensus 119 ~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~--- 195 (430)
T 2xyi_A 119 IEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNG--- 195 (430)
T ss_dssp EEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTT---
T ss_pred eEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCC---
Confidence 123556789999999999997 6899999999999999998621000 01567788999999999999998764
Q ss_pred ceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecC-CCCEEEEEEcC
Q 038577 207 NRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHR-GLDMVVVGFSN 285 (860)
Q Consensus 207 ~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~ 285 (860)
+|++++.||.|++|++..... ..+.+.....+..|...|.+++|+| ++..+++++.+
T Consensus 196 -~l~s~~~dg~i~vwd~~~~~~---------------------~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 253 (430)
T 2xyi_A 196 -YLLSASDDHTICLWDINATPK---------------------EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD 253 (430)
T ss_dssp -EEEEECTTSCEEEEETTSCCB---------------------GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred -eEEEEeCCCeEEEEeCCCCCC---------------------CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC
Confidence 899999999999999987421 0111122344557888999999999 67889999999
Q ss_pred CeEEEEECCCc---eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccC-ceEEEEecCcccCeEEEEEcCCC
Q 038577 286 GVFGLYQMPDF---VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRS-ESYILKQQGHYFDVNCLAYSPDS 361 (860)
Q Consensus 286 g~i~~~~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~-~~~~~~~~~~~~~v~~~~~s~~~ 361 (860)
|.|++||+.+. .....+..+...+.+++|+|++..++++++.+|.|++||+++ +..+..+..|...|.+++|+|++
T Consensus 254 g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 254 QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 333 (430)
T ss_dssp SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSC
T ss_pred CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC
Confidence 99999999877 567778889999999999999987665555669999999997 56677778899999999999998
Q ss_pred C-EEEEEeCCCcEEEEECCC--------------CeeEEEeecCCCceEEEEEeeCCC-EEEEEeCCCcEEEEEcccc
Q 038577 362 Q-LLATGADDNKVKVWTVSS--------------GFCFVTFTEHTNAVTALHFMANNH-SLLSASLDGTVRAWDLFRY 423 (860)
Q Consensus 362 ~-~l~~~~~dg~i~iwd~~~--------------~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~~dg~i~~wd~~~~ 423 (860)
+ ++++++.||.|++||+.. ...+..+.+|...|.+++|+|++. .+++++.||.|++|++...
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 5 799999999999999986 367778888999999999999998 8999999999999998754
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6.9e-31 Score=278.47 Aligned_cols=348 Identities=12% Similarity=0.059 Sum_probs=214.2
Q ss_pred CeeEEEE---cCCCCEEEEEcCCCcEEEEEcccC----------eEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEe
Q 038577 54 NICRIAV---SPDGTFLLTVDENQRCHFINLHCH----------VVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWR 120 (860)
Q Consensus 54 ~v~~va~---spdg~~la~~~~d~~i~vwd~~~~----------~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd 120 (860)
...+++| +|++..++.++.++.|.+|+.... ..+..+.+..++..+.|++..
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 81 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSC--------------- 81 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTC---------------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCc---------------
Confidence 3455566 355544555556888999976421 112222244444455544322
Q ss_pred CCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEcc-
Q 038577 121 SPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSV- 199 (860)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~- 199 (860)
......|...+....+++++.+|++++.|++|++||...+ +.........+.+|.+.|.+++|+|
T Consensus 82 -------------~~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~-~~~~~~~~~~~~gH~~~v~~v~~~p~ 147 (393)
T 4gq1_A 82 -------------SYSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNE-TIITQHVLGGKSGHHNFVNDIDIADV 147 (393)
T ss_dssp -------------EEECC----------CCEEEEEEEEEETTSCEEEEEEETT-EEEEEEEECTTTSCSSCEEEEEEEEE
T ss_pred -------------cccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCC-ccceeeeecccCCCCCceEEEEEccc
Confidence 1222345555566677888899999999999999999887 2211122345789999999999998
Q ss_pred -------CCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEe
Q 038577 200 -------DKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDY 272 (860)
Q Consensus 200 -------~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 272 (860)
|++ +|++++.|++|++||+.++.. ...+..+...+.+++|
T Consensus 148 ~~~~~~~d~~-----~las~s~D~tv~~Wd~~~~~~----------------------------~~~~~~~~~~v~~v~~ 194 (393)
T 4gq1_A 148 YSADNRLAEQ-----VIASVGDDCTLIIWRLTDEGP----------------------------ILAGYPLSSPGISVQF 194 (393)
T ss_dssp ECTTCSEEEE-----EEEEEETTSEEEEEEEETTEE----------------------------EEEEEECSSCEEEEEE
T ss_pred cccccCCCCC-----EEEEEECCCeEEEEECCCCce----------------------------eeeecCCCCCcEEEEE
Confidence 777 999999999999999976421 2233456788999999
Q ss_pred cCCCC-EEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccC
Q 038577 273 HRGLD-MVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFD 351 (860)
Q Consensus 273 ~~~~~-~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~ 351 (860)
+|++. +|++++.||.|++||+.+++.......+........++++. ..........+|...
T Consensus 195 ~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~------------------~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 195 RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT------------------LPLVNTCHSSGIASS 256 (393)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEES------------------GGGC------CCSSS
T ss_pred CCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccc------------------ccceeeeeccccccc
Confidence 99875 79999999999999998887665544333222211111111 111111223578888
Q ss_pred eEEEEEc-CCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee
Q 038577 352 VNCLAYS-PDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT 430 (860)
Q Consensus 352 v~~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 430 (860)
+.++.|+ |+++.+++++.|+.+++||+..+.....+..|...+..+.+.|+.+.+.....
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------- 317 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS------------------- 317 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC-------------------
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc-------------------
Confidence 9999986 79999999999999999999999888888888888888888777543321111
Q ss_pred CCCCCcEEEEEECC-CCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 038577 431 TPSSRQFVSLASDQ-SGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVF 507 (860)
Q Consensus 431 ~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 507 (860)
.+....+.+ ++.++++|+.|+ .|++||+.+++....+.+|..+|.+++|+|||++||+++.+| +.+|.+.
T Consensus 318 -----~~~~~~~~~~~~~~~~sgs~Dg-~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 318 -----LLGACPHPRYMDYFATAHSQHG-LIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp -----SSCCEECSSCTTEEEEEETTTT-EEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred -----ceeEEEccCCCCEEEEEECCCC-EEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 111122223 344556666677 999999999999888888999999999999999999999776 6666654
No 123
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.3e-29 Score=272.55 Aligned_cols=251 Identities=22% Similarity=0.316 Sum_probs=214.1
Q ss_pred EEecCcccCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC----------CeeEEEeecCCCceEEEEEeeCCC-EEEEEe
Q 038577 343 LKQQGHYFDVNCLAYSPD-SQLLATGADDNKVKVWTVSS----------GFCFVTFTEHTNAVTALHFMANNH-SLLSAS 410 (860)
Q Consensus 343 ~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v~~i~~~~~~~-~l~s~~ 410 (860)
.....|.+.|++++|+|+ +.++++++.+|.|++|++.+ ...+..+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 344678999999999997 67999999999999999986 577788889999999999999988 999999
Q ss_pred CCCcEEEEEcccccee------eEeeCCCCCcEEEEEECC-CCCEEEEEecCCCeEEEEECCCC---ceEEEecCcccCe
Q 038577 411 LDGTVRAWDLFRYRNF------RTFTTPSSRQFVSLASDQ-SGEVICAGTLDSFEIFVWSMKTG---RLLDILSGHEGPV 480 (860)
Q Consensus 411 ~dg~i~~wd~~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~v~d~~~~---~~~~~~~~h~~~v 480 (860)
.||.|++|++.++... ......+...+.+++|+| ++.++++++.++ .|++||++++ +.+..+..|...|
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQ-KLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTS-EEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCC-eEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999873321 122235666899999999 678888888888 9999999987 5778888999999
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEEccCC-cceeEEcccCCCeEEEEEeeCCC-EEEEEeCCCeEEEEeCCCC------
Q 038577 481 HGLVFSPTNA-TLASSSWDKTVRLWNVFEG-KGSVESFPHTHDVLTVVYRPDGR-QLACSTLDGQIHFWDPLNG------ 551 (860)
Q Consensus 481 ~~l~~s~~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~------ 551 (860)
++++|+|+++ ++++++.||.|++||++.. .....+..|...|++++|+|+++ +|++++.||.|++||+...
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999987 6899999999999999884 44566668999999999999985 7999999999999999872
Q ss_pred --------ceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCC-EEEEecCCCeEEEEECCCce
Q 038577 552 --------ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGS-YILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 552 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~-~l~~~~~dg~v~vwd~~~~~ 614 (860)
+.+..+.+|. ..|++++|+|+++ +|++++.||.|++|++..+.
T Consensus 361 ~~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHT--------------------AKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp HHHHHCCTTEEEECCCCS--------------------SCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred cccccCCcceEEEcCCCC--------------------CCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 3444444443 4699999999999 89999999999999998753
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.1e-30 Score=298.39 Aligned_cols=251 Identities=21% Similarity=0.277 Sum_probs=217.9
Q ss_pred EEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc--CceEEEEecCcccCeEEEEEcCC--CCEEEEEeCCCcEEE
Q 038577 300 HLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR--SESYILKQQGHYFDVNCLAYSPD--SQLLATGADDNKVKV 375 (860)
Q Consensus 300 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~i 375 (860)
..+.+|.+.|.+++|+|+|+.+++++.+ |.|++||+. ++.....+.+|...|.+++|+|+ ++++++|+.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~d-g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETT-TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECC-CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 4567889999999999999999988776 999999998 56777788899999999999988 999999999999999
Q ss_pred EECCCCe--eEEEeecCCCceEEEEEeeC--CCEEEEEeCCCcEEEEEccccceee-EeeCCCCCcEEEEEECC------
Q 038577 376 WTVSSGF--CFVTFTEHTNAVTALHFMAN--NHSLLSASLDGTVRAWDLFRYRNFR-TFTTPSSRQFVSLASDQ------ 444 (860)
Q Consensus 376 wd~~~~~--~~~~~~~~~~~v~~i~~~~~--~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~------ 444 (860)
||+.++. ....+..|...|.+++|+|+ ++.+++++.||.|++||+.+..... .....+...+.+++++|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 9999887 77788889999999999999 9999999999999999998874332 22345566899999999
Q ss_pred -------CCCEEEEEecCCCeEEEEECCCC----ceEEEecCcccCeEEEEEcCC---CCEEEEEeCCCcEEEEEccCCc
Q 038577 445 -------SGEVICAGTLDSFEIFVWSMKTG----RLLDILSGHEGPVHGLVFSPT---NATLASSSWDKTVRLWNVFEGK 510 (860)
Q Consensus 445 -------~~~~l~~~~~~~~~i~v~d~~~~----~~~~~~~~h~~~v~~l~~s~~---~~~l~s~~~dg~i~iwd~~~~~ 510 (860)
++.++++++.|+ .|++||++++ .....+.+|.++|++++|+|+ ++++++++.||.|++||+.++.
T Consensus 162 ~~~~~~~d~~~l~sgs~dg-~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADN-LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -----CGGGCCEEEEETTS-CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cccccCCCCCEEEEEECCC-eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 589999999998 9999999877 556778899999999999999 8999999999999999998864
Q ss_pred -----ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc
Q 038577 511 -----GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGE 552 (860)
Q Consensus 511 -----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 552 (860)
.......|...|++++|+|+|+++++++.||.|++|++.++.
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 223334588899999999999999999999999999998543
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.5e-29 Score=244.59 Aligned_cols=281 Identities=17% Similarity=0.124 Sum_probs=206.1
Q ss_pred eEEEEecCCC--CEEEEEEcCCeEEEEECCCc---eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceE
Q 038577 267 VTACDYHRGL--DMVVVGFSNGVFGLYQMPDF---VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESY 341 (860)
Q Consensus 267 v~~~~~~~~~--~~l~~~~~~g~i~~~~~~~~---~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~ 341 (860)
+.++-|-..+ +.-++......|++|+..++ +.++++..+..+|..+.+.||-..|++..-.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-------------- 107 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG-------------- 107 (356)
T ss_dssp EEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC--------------
T ss_pred EeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec--------------
Confidence 4445454433 23445555678999999998 8999999999999999999988777665432
Q ss_pred EEEecCcccCeEEEEEcCC----CCEEEEEeCCCcEEEEECCCCeeEEE-eecCCCceEEEEEeeCCCEEEEEeCCCcEE
Q 038577 342 ILKQQGHYFDVNCLAYSPD----SQLLATGADDNKVKVWTVSSGFCFVT-FTEHTNAVTALHFMANNHSLLSASLDGTVR 416 (860)
Q Consensus 342 ~~~~~~~~~~v~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~ 416 (860)
.-+...|++++++|+ ++.+++++. .+++|++.+++.+.. ..+|...|..++++|+|+.+.
T Consensus 108 ----~~~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~--------- 172 (356)
T 2w18_A 108 ----NLEIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKE--------- 172 (356)
T ss_dssp ----SSSEEEEEEECC------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEE---------
T ss_pred ----cccccceEEEEECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceee---------
Confidence 245667999999999 999999875 478887766555554 344555555555555554443
Q ss_pred EEEccccceeeEeeCCCCCcEEEEEECC---CCCEEEEEecCCCeEEEEECCCCceEEEecCcc---cCeEEEEEcCCCC
Q 038577 417 AWDLFRYRNFRTFTTPSSRQFVSLASDQ---SGEVICAGTLDSFEIFVWSMKTGRLLDILSGHE---GPVHGLVFSPTNA 490 (860)
Q Consensus 417 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~---~~v~~l~~s~~~~ 490 (860)
.+.. +...+..++|++ ++..|++++.|+ +|++||+++|+.++++.+|. ..+.+++|+|+|.
T Consensus 173 -----------s~~~-~~~~v~~l~fs~~~g~~~~LaSgS~D~-TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~ 239 (356)
T 2w18_A 173 -----------NQFL-MPPEETILTFAEVQGMQEALLGTTIMN-NIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL 239 (356)
T ss_dssp -----------EEEE-CCCSSCEEEEEEEETSTTEEEEEETTS-EEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE
T ss_pred -----------eecc-CCCceeeEEeeccCCCCceEEEecCCC-cEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC
Confidence 2221 222455667777 789999999999 99999999999999998754 3677889999998
Q ss_pred EE------------EEEeCCCcEEEEEccCCcceeEE-----cccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCce
Q 038577 491 TL------------ASSSWDKTVRLWNVFEGKGSVES-----FPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 491 ~l------------~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
++ ++|+.|++|++||..+++.+... .+|...+.+..+ ++.++++++.|++|+|||+.++++
T Consensus 240 ~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~ 317 (356)
T 2w18_A 240 LFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQC 317 (356)
T ss_dssp EEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSE
T ss_pred EEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcE
Confidence 76 56888999999999988755433 245555444433 488999999999999999999999
Q ss_pred eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEEC
Q 038577 554 MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
+.++.+|.+. .+..++|||||++|++|+.|++|+|||+
T Consensus 318 l~tL~gH~~~-------------------vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 318 TALLPPVSDQ-------------------HWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECCC--C-------------------CCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEecCCCCC-------------------eEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999988752 2456899999999999999999999995
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.3e-31 Score=301.36 Aligned_cols=256 Identities=15% Similarity=0.194 Sum_probs=216.3
Q ss_pred EEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccC--CCCCccceEEE
Q 038577 134 IRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVD--KKTDKVNRIYT 211 (860)
Q Consensus 134 ~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~--~~~~~~~~l~s 211 (860)
...+.+|.+.|++++|+|++++|++|+.||.|++||+... .. .....+.+|.+.|.+++|+++ +. +|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~-~~---~~~~~l~~h~~~V~~l~~s~~~~~~-----~l~s 72 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGE-TH---KLIDTLTGHEGPVWRVDWAHPKFGT-----ILAS 72 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETT-EE---EEEEEECCCSSCEEEEEECCTTSCS-----EEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCC-CC---ccceeccCCcCceEEEEecCCCCCC-----EEEE
Confidence 3567899999999999999999999999999999999843 12 456788999999999999988 77 9999
Q ss_pred EcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCC--CCEEEEEEcCCeEE
Q 038577 212 IARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRG--LDMVVVGFSNGVFG 289 (860)
Q Consensus 212 ~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~g~i~ 289 (860)
++.||.|++||+.++. + .....+..|...|.+++|+|+ ++.+++|+.||.|+
T Consensus 73 ~s~Dg~I~vwd~~~~~------------------------~--~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 73 CSYDGKVLIWKEENGR------------------------W--SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EETTSCEEEEEEETTE------------------------E--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EeCCCeEEEEECCCCc------------------------c--cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 9999999999998742 1 123344568889999999999 99999999999999
Q ss_pred EEECCCc--eeEEEEeecCceeEEEEEee-------------CCCEEEEEEccCCcEEEEEccCc----eEEEEecCccc
Q 038577 290 LYQMPDF--VCIHLLSISREKITTAVFNE-------------LGNWLVFGCAKLGQLLVWEWRSE----SYILKQQGHYF 350 (860)
Q Consensus 290 ~~~~~~~--~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~~~g~i~v~d~~~~----~~~~~~~~~~~ 350 (860)
+||+.++ .....+..+...+.+++|+| ++..+++++.+ |.|++||+.++ .....+.+|..
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~~~~~h~~ 205 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-NLVKIWKYNSDAQTYVLESTLEGHSD 205 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETT-SCEEEEEEETTTTEEEEEEEECCCSS
T ss_pred EEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECC-CeEEEEeccCCcccceeeeeecCCCC
Confidence 9999876 34456677888999999999 58888888776 99999999876 56667788999
Q ss_pred CeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCe-----eEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q 038577 351 DVNCLAYSPD---SQLLATGADDNKVKVWTVSSGF-----CFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR 422 (860)
Q Consensus 351 ~v~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~ 422 (860)
.|.+++|+|+ +.++++++.||.|++||+.++. .......|...|++++|+|+++++++++.||.|++|++..
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999999999 8999999999999999998764 3333455889999999999999999999999999999986
Q ss_pred cce
Q 038577 423 YRN 425 (860)
Q Consensus 423 ~~~ 425 (860)
...
T Consensus 286 ~~~ 288 (753)
T 3jro_A 286 EGK 288 (753)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 127
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.6e-30 Score=266.25 Aligned_cols=267 Identities=10% Similarity=0.072 Sum_probs=217.9
Q ss_pred EeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC---------CCeeE
Q 038577 314 FNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS---------SGFCF 384 (860)
Q Consensus 314 ~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~---------~~~~~ 384 (860)
+.+++..+++++.+ |.|++||+.+++.+..+. ...|.++.++|+ +++++.|++|++|+.. ++..+
T Consensus 44 ~~~d~~~l~sg~~D-g~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 44 MYYDKWVCMCRCED-GALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSEEEEEEEEEEET-TEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hcCCCCEEEEECCC-CcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 34566777777665 999999999998877765 456888889988 9999999999999765 45544
Q ss_pred EEee-cCCCceEEEEEee--CCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEE
Q 038577 385 VTFT-EHTNAVTALHFMA--NNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFV 461 (860)
Q Consensus 385 ~~~~-~~~~~v~~i~~~~--~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v 461 (860)
..+. .|..+|.+++|+| +++++++++.||.|++||+.+++............+.+++++|++.++++|+.|+ .|++
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg-~i~i 196 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG-ILDV 196 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS-CEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC-EEEE
Confidence 4444 6778999999999 9999999999999999999999887766666666799999999999999999998 9999
Q ss_pred EECCCCceE-EEecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc---cCCCe--EEEEEeeCCCEE
Q 038577 462 WSMKTGRLL-DILSG-HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP---HTHDV--LTVVYRPDGRQL 534 (860)
Q Consensus 462 ~d~~~~~~~-~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~~v--~~~~~s~~~~~l 534 (860)
||+++++.. ..+.+ |.++|++++|+|++.+|++++ |+.|++||+++.+....+.. |...+ .+++|+|+|++|
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 999999988 88888 999999999999999999999 55999999998875443332 33333 469999999999
Q ss_pred EEEeC-CCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEec---CCCEEEEecCCCeEEEEEC
Q 038577 535 ACSTL-DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSA---DGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 535 ~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~---~g~~l~~~~~dg~v~vwd~ 610 (860)
++++. |+.+++|++.+....... . ++..++|++ +++.+++++.||.+.++-.
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~---~---------------------~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTK---D---------------------EESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEE---E---------------------EEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEecCCCCcEEEEEEcccccceEe---c---------------------CceeEecCccccccceeEEEecCCceEEEEe
Confidence 99998 999999999776544333 1 378889998 8999999999999988764
Q ss_pred CC
Q 038577 611 AD 612 (860)
Q Consensus 611 ~~ 612 (860)
..
T Consensus 332 ~~ 333 (343)
T 3lrv_A 332 TN 333 (343)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=5.5e-28 Score=264.89 Aligned_cols=328 Identities=9% Similarity=0.015 Sum_probs=263.3
Q ss_pred EccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCC
Q 038577 197 FSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGL 276 (860)
Q Consensus 197 ~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 276 (860)
|+|++. .+++.+.|++|.+||..++.. ...+... ..+.+++++|+|
T Consensus 145 ~~p~~~-----~~vs~~~d~~V~v~D~~t~~~----------------------------~~~i~~g-~~~~~v~~spdg 190 (543)
T 1nir_A 145 LDLPNL-----FSVTLRDAGQIALVDGDSKKI----------------------------VKVIDTG-YAVHISRMSASG 190 (543)
T ss_dssp CCGGGE-----EEEEEGGGTEEEEEETTTCCE----------------------------EEEEECS-TTEEEEEECTTS
T ss_pred cCCCCE-----EEEEEcCCCeEEEEECCCceE----------------------------EEEEecC-cccceEEECCCC
Confidence 788887 899999999999999887532 1111111 128899999999
Q ss_pred CEEEEEEcCCeEEEEEC--CCceeEEEEeecCceeEEEEEee----CCCEEEEEEccCCcEEEEEccCceEEEEecCc--
Q 038577 277 DMVVVGFSNGVFGLYQM--PDFVCIHLLSISREKITTAVFNE----LGNWLVFGCAKLGQLLVWEWRSESYILKQQGH-- 348 (860)
Q Consensus 277 ~~l~~~~~~g~i~~~~~--~~~~~~~~~~~~~~~i~~~~~s~----~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~-- 348 (860)
+++++++.++.|.+||+ .+++.+..+.. ...+..++|+| +|+++++++..+++|.+||..+++.+..+..+
T Consensus 191 ~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~ 269 (543)
T 1nir_A 191 RYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM 269 (543)
T ss_dssp CEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEE
T ss_pred CEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCc
Confidence 99999999999999999 88888888875 44679999999 99999999877799999999999988877542
Q ss_pred --------c-cCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCeeEE--EeecCCCceEEEEEeeCCCEEEEEe-CCCcE
Q 038577 349 --------Y-FDVNCLAYSPDSQL-LATGADDNKVKVWTVSSGFCFV--TFTEHTNAVTALHFMANNHSLLSAS-LDGTV 415 (860)
Q Consensus 349 --------~-~~v~~~~~s~~~~~-l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i 415 (860)
. ..+.++.++|++.. +++...++.|.+||+.+.+.+. .+ .+...+.++.|+|+++++++++ .+++|
T Consensus 270 ~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v 348 (543)
T 1nir_A 270 TVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKV 348 (543)
T ss_dssp CSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEE
T ss_pred ccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeE
Confidence 2 26889999997765 5566678999999998765443 33 3667788999999999876554 68899
Q ss_pred EEEEccccceeeEeeCC---CCCcEEEEEECCC-CCEEEEEecCCCeEEEEECCC-------CceEEEecCcccCeEEEE
Q 038577 416 RAWDLFRYRNFRTFTTP---SSRQFVSLASDQS-GEVICAGTLDSFEIFVWSMKT-------GRLLDILSGHEGPVHGLV 484 (860)
Q Consensus 416 ~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~l~~~~~~~~~i~v~d~~~-------~~~~~~~~~h~~~v~~l~ 484 (860)
.+||..+++....+... +......+ ++|+ +..++++..+.++|.+||+.+ ++.++++.+|.+.+..++
T Consensus 349 ~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~ 427 (543)
T 1nir_A 349 AVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK 427 (543)
T ss_dssp EEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred EEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEE
Confidence 99999999988887753 22222333 4677 555555543333999999998 899999999999999999
Q ss_pred EcCCCCEEEEEe-------CCCcEEEEEccCCcceeEEc---------ccCCCeEEEEEeeCCCEEEEEe-----CCCeE
Q 038577 485 FSPTNATLASSS-------WDKTVRLWNVFEGKGSVESF---------PHTHDVLTVVYRPDGRQLACST-----LDGQI 543 (860)
Q Consensus 485 ~s~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~-----~dg~i 543 (860)
++|++++|++++ .+++|.+||+.+.+...+.. .+...+..+.|+|+|+.|+++. .++.|
T Consensus 428 ~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i 507 (543)
T 1nir_A 428 THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 507 (543)
T ss_dssp CCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEE
T ss_pred cCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeE
Confidence 999999999987 27799999999988663432 4567899999999999998763 47999
Q ss_pred EEEeCCCCceeEEEeccc
Q 038577 544 HFWDPLNGELMYTIEGRR 561 (860)
Q Consensus 544 ~iwd~~~~~~~~~~~~~~ 561 (860)
.|||..+++++.+++...
T Consensus 508 ~v~D~~t~~~~~~i~~~~ 525 (543)
T 1nir_A 508 VVVDDKTLKLKAVVKDPR 525 (543)
T ss_dssp EEEETTTTEEEEEECCTT
T ss_pred EEEECCCceEEEeecCCC
Confidence 999999999999998655
No 129
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.9e-29 Score=267.47 Aligned_cols=255 Identities=13% Similarity=0.130 Sum_probs=177.7
Q ss_pred eeCCCEEEEEEccCCcEEEEEccCceEEEE-----ecCcccCeEEEEEcC--------CCCEEEEEeCCCcEEEEECCCC
Q 038577 315 NELGNWLVFGCAKLGQLLVWEWRSESYILK-----QQGHYFDVNCLAYSP--------DSQLLATGADDNKVKVWTVSSG 381 (860)
Q Consensus 315 s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~-----~~~~~~~v~~~~~s~--------~~~~l~~~~~dg~i~iwd~~~~ 381 (860)
++++..+++++. |++|++||.+++..... +.+|...|.+++|+| |+++||+|+.|++|++||+.++
T Consensus 98 ~~~~~~las~~~-d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 98 PVYSLFLACVCQ-DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CEEEEEEEEEET-TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCCCEEEEEeC-CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 344555666655 49999999998865432 468999999999998 8899999999999999999999
Q ss_pred eeEEEeecCCCceEEEEEeeCC-CEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEE
Q 038577 382 FCFVTFTEHTNAVTALHFMANN-HSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIF 460 (860)
Q Consensus 382 ~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 460 (860)
.....+..|..+|.+++|+|++ .+|++++.|++|++||+.+++............ .. .+.
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~---------~~----------~~~ 237 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK---------NP----------WLL 237 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CS---------CC----------CSE
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcc---------cc----------eEE
Confidence 8888888999999999999987 479999999999999998876544332211100 00 011
Q ss_pred EEECCCCceEEEecCcccCeEEEEEc-CCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEE-------------
Q 038577 461 VWSMKTGRLLDILSGHEGPVHGLVFS-PTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVV------------- 526 (860)
Q Consensus 461 v~d~~~~~~~~~~~~h~~~v~~l~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~------------- 526 (860)
-++...........+|...+.++.|+ |+++.+++++.|+++++||+..++....+..|...+..+.
T Consensus 238 s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 317 (393)
T 4gq1_A 238 TLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS 317 (393)
T ss_dssp EEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC
T ss_pred ecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc
Confidence 11111112223345788999999987 7999999999999999999987765544444444443333
Q ss_pred -----Eee--CCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEe
Q 038577 527 -----YRP--DGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAG 599 (860)
Q Consensus 527 -----~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~ 599 (860)
|+| ++.++++|+.||.|++||+.+++....+..|.. +|.+++|+|||++|+++
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~--------------------~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM--------------------PIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS--------------------CEEEEEECTTSSEEEEE
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC--------------------cEEEEEEcCCCCEEEEE
Confidence 333 344677888999999999999998888777654 59999999999999999
Q ss_pred cCCCeEEEEEC
Q 038577 600 GSSKYICMYDV 610 (860)
Q Consensus 600 ~~dg~v~vwd~ 610 (860)
+++| +.+|.+
T Consensus 378 s~~G-v~lvrL 387 (393)
T 4gq1_A 378 TEGS-VLLTRL 387 (393)
T ss_dssp ESSE-EEEEEE
T ss_pred eCCC-eEEEEE
Confidence 8777 666654
No 130
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.9e-29 Score=257.68 Aligned_cols=266 Identities=8% Similarity=0.046 Sum_probs=215.5
Q ss_pred EecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc---------CceE
Q 038577 271 DYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR---------SESY 341 (860)
Q Consensus 271 ~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~---------~~~~ 341 (860)
.+.+++.++++|+.||.|++||+.+++.+..+. ...+.++.++|+ ++++ +.|+.+++|+.. +++.
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~-s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISR-GPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEE-CSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEe-cCCCeEEEEEccCceEEeecCCcce
Confidence 345678899999999999999999998888776 456778888887 5544 455999999765 4443
Q ss_pred EEEe-cCcccCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeeEEEee-cCCCceEEEEEeeCCCEEEEEeCCCcEEE
Q 038577 342 ILKQ-QGHYFDVNCLAYSP--DSQLLATGADDNKVKVWTVSSGFCFVTFT-EHTNAVTALHFMANNHSLLSASLDGTVRA 417 (860)
Q Consensus 342 ~~~~-~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~~ 417 (860)
+... ..|...|.+++|+| +++++++++.||.|++||+++++...... .|...+.+++|+|++.++++|+.||.|++
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 4443 36778899999999 99999999999999999999998877664 45568999999999999999999999999
Q ss_pred EEcccccee-eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC---cccCeE--EEEEcCCCCE
Q 038577 418 WDLFRYRNF-RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG---HEGPVH--GLVFSPTNAT 491 (860)
Q Consensus 418 wd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~---h~~~v~--~l~~s~~~~~ 491 (860)
||+++++.. ..+...+...+.+++|+|++.+|++++ ++ .|++||+++++....+.. |...+. +++|+|++++
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 999999887 666665678999999999999999999 55 899999999877655543 444444 6999999999
Q ss_pred EEEEeC-CCcEEEEEccCCcceeEEcccCCCeEEEEEee---CCCEEEEEeCCCeEEEEeC
Q 038577 492 LASSSW-DKTVRLWNVFEGKGSVESFPHTHDVLTVVYRP---DGRQLACSTLDGQIHFWDP 548 (860)
Q Consensus 492 l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~ 548 (860)
|++++. |+.+++|++......... .++..++|+| +.+.+++++.||.+.++-.
T Consensus 275 l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 999998 999999999766543333 5678889998 8899999999999988753
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1.1e-26 Score=269.55 Aligned_cols=324 Identities=9% Similarity=0.043 Sum_probs=253.3
Q ss_pred CCceEEEEecCCCCEEEEEEc-CC-----eEEEEECCCceeEEEEeecCc------------------------eeEEEE
Q 038577 264 PSKVTACDYHRGLDMVVVGFS-NG-----VFGLYQMPDFVCIHLLSISRE------------------------KITTAV 313 (860)
Q Consensus 264 ~~~v~~~~~~~~~~~l~~~~~-~g-----~i~~~~~~~~~~~~~~~~~~~------------------------~i~~~~ 313 (860)
...+.+++|+|||++|++++. +| .|++||+.+++....+..+.. .+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 999999999887776655432 378999
Q ss_pred EeeCCCEEEEEEccCCcEEEEEccCce--EEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCC
Q 038577 314 FNELGNWLVFGCAKLGQLLVWEWRSES--YILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHT 391 (860)
Q Consensus 314 ~s~~~~~l~~~~~~~g~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 391 (860)
|+|||+.+++++. +.|++||+.++. ....+..|...+.+++|+|||++|++++. +.|++||+.+++.......+.
T Consensus 116 ~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 9999999999876 899999999872 33445667788999999999999999875 699999999887766554444
Q ss_pred Cc----------------eEEEEEeeCCCEEEEEeCCC---------------------------------cEEEEEccc
Q 038577 392 NA----------------VTALHFMANNHSLLSASLDG---------------------------------TVRAWDLFR 422 (860)
Q Consensus 392 ~~----------------v~~i~~~~~~~~l~s~~~dg---------------------------------~i~~wd~~~ 422 (860)
.. +.+++|+|||++|++++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 47899999999999988765 788999988
Q ss_pred -cceeeEeeC-CCCCcEEEEEECCCCCEEEEEec----CCCeEEEEECCCCceEEEecCccc----CeEEEEEcCCCCEE
Q 038577 423 -YRNFRTFTT-PSSRQFVSLASDQSGEVICAGTL----DSFEIFVWSMKTGRLLDILSGHEG----PVHGLVFSPTNATL 492 (860)
Q Consensus 423 -~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~----~~~~i~v~d~~~~~~~~~~~~h~~----~v~~l~~s~~~~~l 492 (860)
++....... .+...+..++| |||+.|+++.. +...|++||+.+++....+..+.. .+.+++|+|||+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 765443322 34567889999 99999998764 123899999999998877765553 45689999999999
Q ss_pred EEEeCCCcEEEEEcc-CCcceeEEcccCCCeEEE-EEeeCCCEEEEE-eCCC--eEEEEeCCC-CceeEEEecccccCCC
Q 038577 493 ASSSWDKTVRLWNVF-EGKGSVESFPHTHDVLTV-VYRPDGRQLACS-TLDG--QIHFWDPLN-GELMYTIEGRRDISGG 566 (860)
Q Consensus 493 ~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~-~~s~~~~~l~~~-~~dg--~i~iwd~~~-~~~~~~~~~~~~~~~~ 566 (860)
++++.||.+++|.+. .+. ...+..+...+..+ .|+|+|+.|+.. +.++ .+++|++.. +.....+....
T Consensus 352 ~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~----- 425 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAP----- 425 (741)
T ss_dssp EEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSC-----
T ss_pred EEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCC-----
Confidence 999999988888876 334 55555677888887 599999977554 4455 899999864 54445554422
Q ss_pred ccccccccccccCCCCcEEEEEEecCCCEEEEecCC----CeEEEEECCCc
Q 038577 567 RLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS----KYICMYDVADQ 613 (860)
Q Consensus 567 ~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d----g~v~vwd~~~~ 613 (860)
.+..++|||||++|+....+ ..+.+|+...+
T Consensus 426 ----------------~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 426 ----------------GMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp ----------------SEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred ----------------CceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 37899999999998876543 57889988654
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.3e-26 Score=246.70 Aligned_cols=300 Identities=9% Similarity=0.061 Sum_probs=237.1
Q ss_pred ccCeeEEEEcCCCC-EEEEEc----CCC----cEEEEEc--ccCeEEEE--ee-cCCceeEEEECC--------------
Q 038577 52 SSNICRIAVSPDGT-FLLTVD----ENQ----RCHFINL--HCHVVLHR--VR-FKYPVNAILFSP-------------- 103 (860)
Q Consensus 52 ~~~v~~va~spdg~-~la~~~----~d~----~i~vwd~--~~~~~~~~--~~-~~~~v~~~~fsp-------------- 103 (860)
...+...+|++.|. ++++++ .+| .+++||+ .+++++.. +. |...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34677888888885 555664 467 8999999 89987744 44 667777777764
Q ss_pred CCCEEEEE-eC------CeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCC---eEEEEeeccc
Q 038577 104 NGKYIAVG-TG------KLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDL---AVRLFYVKEK 173 (860)
Q Consensus 104 dg~~la~~-~~------~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg---~v~vwd~~~~ 173 (860)
.+..++++ .+ +.|++||+.++. ...+.+|...+.+++|+|||++|++++.++ .|++||+.++
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g~~--------~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg 213 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDGYN--------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG 213 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTSCS--------CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCCCC--------CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCC
Confidence 25566655 33 799999998654 366778999999999999999999999875 9999999887
Q ss_pred ccCcccccceEeecCCCcEEEEEEccCCCCCccceEE-EEcCCcc--EEEeeecCCCCCCccccCCCCCCCCCCCcceee
Q 038577 174 LKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIY-TIARDCY--MFSWGFSGNDGKIDETMEDSEPPSPGTPERRVK 250 (860)
Q Consensus 174 ~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~-s~~~dg~--i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (860)
....+..|.+.+.+++|+||++ .|+ +++.++. |++||+.++..
T Consensus 214 -------~~~~l~~~~~~~~~~~~spdg~-----~la~~~~~~g~~~i~~~d~~~~~~---------------------- 259 (415)
T 2hqs_A 214 -------AVRQVASFPRHNGAPAFSPDGS-----KLAFALSKTGSLNLYVMDLASGQI---------------------- 259 (415)
T ss_dssp -------CEEEEECCSSCEEEEEECTTSS-----EEEEEECTTSSCEEEEEETTTCCE----------------------
T ss_pred -------cEEEeecCCCcccCEEEcCCCC-----EEEEEEecCCCceEEEEECCCCCE----------------------
Confidence 2346778888999999999998 777 6666655 88898876421
Q ss_pred eEEeeeeccccCCCCceEEEEecCCCCEEEEEEcC-C--eEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEcc
Q 038577 251 KWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSN-G--VFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAK 327 (860)
Q Consensus 251 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-g--~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~ 327 (860)
..+..+...+.+++|+|+|+.|++++.+ | .|++||+.+++. ..+..+...+..++|+|+|+++++++.+
T Consensus 260 -------~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 260 -------RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp -------EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred -------EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECc
Confidence 2334556789999999999999988864 4 788889987764 3455566788999999999999998876
Q ss_pred C--CcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCeeEEEeecCCCceEEEEEeeC
Q 038577 328 L--GQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDN---KVKVWTVSSGFCFVTFTEHTNAVTALHFMAN 402 (860)
Q Consensus 328 ~--g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~ 402 (860)
+ ..|.+||+.+++.. .+..+. .+.+++|+|+|+.|++++.++ .|++||+. +.....+..|.+.|.+++|+|.
T Consensus 332 ~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 332 GGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp SSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCC
T ss_pred CCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccc
Confidence 3 48999999988764 444554 799999999999999988877 79999986 6667788899999999999996
Q ss_pred CC
Q 038577 403 NH 404 (860)
Q Consensus 403 ~~ 404 (860)
..
T Consensus 409 ~~ 410 (415)
T 2hqs_A 409 LH 410 (415)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=2.5e-26 Score=266.65 Aligned_cols=320 Identities=10% Similarity=0.053 Sum_probs=242.0
Q ss_pred ccCeeEEEEcCCCCEEEEEcC-CC-----cEEEEEcccCeEEEEeec-C------------------------CceeEEE
Q 038577 52 SSNICRIAVSPDGTFLLTVDE-NQ-----RCHFINLHCHVVLHRVRF-K------------------------YPVNAIL 100 (860)
Q Consensus 52 ~~~v~~va~spdg~~la~~~~-d~-----~i~vwd~~~~~~~~~~~~-~------------------------~~v~~~~ 100 (860)
...+.+++|||||++||+++. ++ .|++||+.+++....+.+ . ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999988 87 899999999988777652 2 2388999
Q ss_pred ECCCCCEEEEEeCCeEEEEeCCCC---CcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCc
Q 038577 101 FSPNGKYIAVGTGKLVQIWRSPGF---KKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGI 177 (860)
Q Consensus 101 fspdg~~la~~~~~~i~iwd~~~~---~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~ 177 (860)
|||||++|+++..+.|++||+.++ + ...+..|...+.+++|||||++|++++. +.|++||+.++
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~--------~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g---- 182 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAA--------VRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASG---- 182 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTS--------CCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTT----
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcce--------EEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCC----
Confidence 999999999998899999999987 4 2456778889999999999999999874 69999999876
Q ss_pred ccccceEeecCCCc----------------EEEEEEccCCCCCccceEEEEcCCc-------------------------
Q 038577 178 HTNKPFLLLGHRDS----------------VVGCFFSVDKKTDKVNRIYTIARDC------------------------- 216 (860)
Q Consensus 178 ~~~~~~~~~~h~~~----------------i~~~~~~~~~~~~~~~~l~s~~~dg------------------------- 216 (860)
........+... +..++|+|||+ +|++++.|+
T Consensus 183 --~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-----~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 183 --RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-----AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp --EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-----CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred --CEEEeccCCccceeccccceeeeeccccccceEECCCCC-----EEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 222222233322 46799999999 899987765
Q ss_pred --------cEEEeeecC-CCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEc---
Q 038577 217 --------YMFSWGFSG-NDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFS--- 284 (860)
Q Consensus 217 --------~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--- 284 (860)
.|++||+.+ +.. . .......+...+..++| |||+.|+++..
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~----------------------~----~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~ 308 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQT----------------------Q----WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD 308 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCC----------------------E----EECCCSCSSEEEEEEEE-EETTEEEEEEEETT
T ss_pred CCCCCCeeEEEEEECCCCCce----------------------E----EecCCCCcceEEEEEEe-CCCCEEEEEEeccc
Confidence 667777665 432 0 00000135567899999 99999997765
Q ss_pred --CCeEEEEECCCceeEEEEeecCc----eeEEEEEeeCCCEEEEEEccCCcEEEEEcc-CceEEEEecCcccCeEEE-E
Q 038577 285 --NGVFGLYQMPDFVCIHLLSISRE----KITTAVFNELGNWLVFGCAKLGQLLVWEWR-SESYILKQQGHYFDVNCL-A 356 (860)
Q Consensus 285 --~g~i~~~~~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~-~~~~~~~~~~~~~~v~~~-~ 356 (860)
+..|++||+.+++....+..+.. .+..++|+|||+.+++ +..+|...+|.+. ++. ...+..|...+..+ .
T Consensus 309 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~-~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~ 386 (741)
T 2ecf_A 309 QKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWS-SERTGFQHLYRIDSKGK-AAALTHGNWSVDELLA 386 (741)
T ss_dssp SSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEE-ECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEE
T ss_pred CCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEE-ecCCCccEEEEEcCCCC-eeeeeecceEEEeEeE
Confidence 57899999999888777665543 4568999999995544 4556877777765 344 66677777788887 5
Q ss_pred EcCCCCEEEEE-eCCC--cEEEEECCC-CeeEEEeecCCCceEEEEEeeCCCEEEEEeCC----CcEEEEEcc
Q 038577 357 YSPDSQLLATG-ADDN--KVKVWTVSS-GFCFVTFTEHTNAVTALHFMANNHSLLSASLD----GTVRAWDLF 421 (860)
Q Consensus 357 ~s~~~~~l~~~-~~dg--~i~iwd~~~-~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~~wd~~ 421 (860)
|+|+|+.++.. +.++ .+++|++.. +.....+.. ...+..++|+||++.++....+ ..+.+|+..
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 99999977654 4454 899999864 555566654 6678899999999988866443 357777764
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=3.4e-26 Score=243.57 Aligned_cols=293 Identities=13% Similarity=0.040 Sum_probs=228.0
Q ss_pred EEEe-CCC-EEEeee-----CC----eEEEEEC--CCCcEE--eeccCCccCeeEEEEcC--------------CCCEEE
Q 038577 18 AVLS-QNT-KLISPV-----GN----RVSVTDL--IKSKTV--TLPVESSSNICRIAVSP--------------DGTFLL 68 (860)
Q Consensus 18 ~~~s-dg~-~l~~~~-----~~----~i~v~d~--~~~~~~--~~~~~h~~~v~~va~sp--------------dg~~la 68 (860)
..|+ +|. +++++. +| .|++||+ .+++++ ..+.+|...+..+++++ .+..++
T Consensus 68 ~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~ 147 (415)
T 2hqs_A 68 AAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIA 147 (415)
T ss_dssp HHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEE
T ss_pred HHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEE
Confidence 4455 554 454553 46 7999999 998876 44668988898888875 266777
Q ss_pred EEcCC------CcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEe-C---CeEEEEeCCCCCcccceeEEEEEee
Q 038577 69 TVDEN------QRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGT-G---KLVQIWRSPGFKKEVFAFELIRTLA 138 (860)
Q Consensus 69 ~~~~d------~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~-~---~~i~iwd~~~~~~~~~~~~~~~~~~ 138 (860)
+++.+ +.|++||+..+.......|...+.+++|||||++||++. + ..|++||+.+++. ..+.
T Consensus 148 ~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~--------~~l~ 219 (415)
T 2hqs_A 148 YVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV--------RQVA 219 (415)
T ss_dssp EEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--------EEEE
T ss_pred EEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE--------EEee
Confidence 76654 799999998665555555889999999999999999983 3 4999999998862 4567
Q ss_pred ccCCCeEEEEEcCCCCeEE-EeecCCe--EEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcC-
Q 038577 139 DCNDKVTALNWSPDSNYLL-VGSKDLA--VRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIAR- 214 (860)
Q Consensus 139 ~h~~~v~~l~~s~d~~~l~-s~~~dg~--v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~- 214 (860)
.|.+.+.+++|+|||++|+ +++.++. |++||+.++ ....+..|...+.+++|+||++ +|++++.
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~-------~~~~l~~~~~~~~~~~~spdg~-----~l~~~s~~ 287 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG-------QIRQVTDGRSNNTEPTWFPDSQ-----NLAFTSDQ 287 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-------CEEECCCCSSCEEEEEECTTSS-----EEEEEECT
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC-------CEEeCcCCCCcccceEECCCCC-----EEEEEECC
Confidence 7888999999999999888 5555554 899998876 2466778889999999999999 8888876
Q ss_pred Cc--cEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcC---CeEE
Q 038577 215 DC--YMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSN---GVFG 289 (860)
Q Consensus 215 dg--~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---g~i~ 289 (860)
++ .|++|++.++.. ..+..+...+.+++|+|+|++|++++.+ +.|.
T Consensus 288 ~g~~~i~~~d~~~~~~-----------------------------~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~ 338 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAP-----------------------------QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 338 (415)
T ss_dssp TSSCEEEEEETTSSCC-----------------------------EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred CCCcEEEEEECCCCCE-----------------------------EEEecCCCcccCeEECCCCCEEEEEECcCCceEEE
Confidence 45 566777765422 1122344578899999999999988765 5899
Q ss_pred EEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCC--cEEEEEccCceEEEEecCcccCeEEEEEcCCCC
Q 038577 290 LYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLG--QLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQ 362 (860)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g--~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 362 (860)
+||+.+++.. .+..+. .+.+++|+|+|+.+++++.+.+ .|++||+. +.....+..|.+.|.+++|+|...
T Consensus 339 ~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 339 KQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 9999887764 444443 8899999999999999988755 79999987 445667788999999999999653
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=2.2e-26 Score=266.50 Aligned_cols=347 Identities=13% Similarity=0.124 Sum_probs=248.7
Q ss_pred CCcEEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCcc---CeeEEEEcCCCCEEEEEcCC---------CcEEEEEc
Q 038577 15 GGNAVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSS---NICRIAVSPDGTFLLTVDEN---------QRCHFINL 81 (860)
Q Consensus 15 ~~~~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~---~v~~va~spdg~~la~~~~d---------~~i~vwd~ 81 (860)
...++|| ||+++++..++.|++||+.+++...++.+|.. .|.+++|||||++||+++.+ +.+.+||+
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 3468899 99988777778999999999998777766665 49999999999999998764 78889999
Q ss_pred ccCeEEEEee----cCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCC--------------
Q 038577 82 HCHVVLHRVR----FKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDK-------------- 143 (860)
Q Consensus 82 ~~~~~~~~~~----~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~-------------- 143 (860)
.+++. ..+. +...+.+++|||||++||++.++.|++||+.+++. ......+...
T Consensus 99 ~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~-------~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 99 PHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQA-------IRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp SSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCC-------EEEECCCBTTTEEEEECCHHHHHT
T ss_pred CCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCce-------EEEecCCCCCceECcccceeEEEE
Confidence 99876 3333 33348999999999999999989999999998763 2333333332
Q ss_pred ----eEEEEEcCCCCeEEEeecC-CeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccE
Q 038577 144 ----VTALNWSPDSNYLLVGSKD-LAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYM 218 (860)
Q Consensus 144 ----v~~l~~s~d~~~l~s~~~d-g~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i 218 (860)
+.+++|||||++|++++.| +.+.+|++... .. .+...+..+.|.++|. . ..+..+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~G~-----~----~~~~~l 230 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTY-TG----------SIYPTVKPYHYPKAGS-----E----NPSISL 230 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCC-SS----------SSSCCCEEEECCBTTS-----C----CCEEEE
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeecc-CC----------cCCCcceeccCCCCCC-----C----CCeeEE
Confidence 3789999999999988754 56888887644 11 1233477888888875 3 345689
Q ss_pred EEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcC----CeEEEEECC
Q 038577 219 FSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSN----GVFGLYQMP 294 (860)
Q Consensus 219 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~~~~~~ 294 (860)
++||+.++... ..+.....+..+...+..++|+|||+.+++.... ..|++||+.
T Consensus 231 ~~~d~~~~~~~----------------------~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 231 HVIGLNGPTHD----------------------LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp EEEESSSSCCC----------------------EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred EEEECCCCcee----------------------EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 99999875420 0000011112235578999999999988776543 579999999
Q ss_pred CceeEEEEeec-Ccee----EEEEEeeCCCEEEEE-EccCC------cEEEEE-ccCce--EEEEecCcccCeEE-EEEc
Q 038577 295 DFVCIHLLSIS-REKI----TTAVFNELGNWLVFG-CAKLG------QLLVWE-WRSES--YILKQQGHYFDVNC-LAYS 358 (860)
Q Consensus 295 ~~~~~~~~~~~-~~~i----~~~~~s~~~~~l~~~-~~~~g------~i~v~d-~~~~~--~~~~~~~~~~~v~~-~~~s 358 (860)
+++....+..+ ...+ ..++|+|||+.+++. +..++ .|.+|| ..++. ....+..+...+.. ++|+
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 289 TGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp TCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred CCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 88877665443 2333 378999999998876 55556 566777 34433 13334333344554 6999
Q ss_pred CCCCEEEEEeCC---CcEEEEECCCCe--eEEEeec---CCCceEEEEEeeCCCEEEEEeC
Q 038577 359 PDSQLLATGADD---NKVKVWTVSSGF--CFVTFTE---HTNAVTALHFMANNHSLLSASL 411 (860)
Q Consensus 359 ~~~~~l~~~~~d---g~i~iwd~~~~~--~~~~~~~---~~~~v~~i~~~~~~~~l~s~~~ 411 (860)
|||+.|+..+.+ +.+++|++.... ....+.. |...+..++|+|++++++....
T Consensus 369 pdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 369 EKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred CCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 999999876655 789999986432 3333443 5677889999999998876543
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.3e-25 Score=259.07 Aligned_cols=320 Identities=13% Similarity=0.079 Sum_probs=233.6
Q ss_pred cEEEeCCCEEEeeeCCeEEEEECCCCcE--EeeccCCc-----------------cCeeEEEEcCCCCEEEEEcCCCcEE
Q 038577 17 NAVLSQNTKLISPVGNRVSVTDLIKSKT--VTLPVESS-----------------SNICRIAVSPDGTFLLTVDENQRCH 77 (860)
Q Consensus 17 ~~~~sdg~~l~~~~~~~i~v~d~~~~~~--~~~~~~h~-----------------~~v~~va~spdg~~la~~~~d~~i~ 77 (860)
.+.|+ |+.+++..++.| +||+.+++. ..+. .|. ..|.+++|||| ++++++. ++.++
T Consensus 30 ~~~w~-g~~~~~~~~~~i-~~d~~tg~~~~~~l~-~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i~ 104 (706)
T 2z3z_A 30 GLQWM-GDNYVFIEGDDL-VFNKANGKSAQTTRF-SAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGLV 104 (706)
T ss_dssp TCEEE-TTEEEEEETTEE-EEEC-------CEEE-EHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEEE
T ss_pred CCcCc-CCeEEEEeCCcE-EEECCCCcEeeEEee-chhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEEE
Confidence 35666 667777766668 999999988 4443 443 46999999999 6666553 59999
Q ss_pred EEEcccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCC-----CCcccceeEEEEEeeccCCC---------
Q 038577 78 FINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPG-----FKKEVFAFELIRTLADCNDK--------- 143 (860)
Q Consensus 78 vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~-----~~~~~~~~~~~~~~~~h~~~--------- 143 (860)
+||+.+++......+...+.+++|||||++||++.++.|++|++.+ ++. ......+...
T Consensus 105 ~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~-------~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 105 GFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRA-------IAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp EEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCC-------EESCSCCBTTEEESSCCGG
T ss_pred EEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCc-------EEeccCCCCCeEcccchhh
Confidence 9999999887777778889999999999999999999999999988 653 2222223332
Q ss_pred -----eEEEEEcCCCCeEEEee---------------------------------cCCeEEEEeecccccCcccccceEe
Q 038577 144 -----VTALNWSPDSNYLLVGS---------------------------------KDLAVRLFYVKEKLKGIHTNKPFLL 185 (860)
Q Consensus 144 -----v~~l~~s~d~~~l~s~~---------------------------------~dg~v~vwd~~~~~~~~~~~~~~~~ 185 (860)
+.+++|||||++|++++ .+..|.+||+.++ +. ......
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-~~---~~~~~~ 253 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-KT---VYLQTG 253 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-EE---EECCCC
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-ce---EeeccC
Confidence 58999999999999987 4467999999877 11 111112
Q ss_pred ecCCCcEEEEEEccCCCCCccceEEEEcCCc-----cEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccc
Q 038577 186 LGHRDSVVGCFFSVDKKTDKVNRIYTIARDC-----YMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDF 260 (860)
Q Consensus 186 ~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg-----~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (860)
..|...+..++|+||++ +|++++.++ .|++||..++.. .........
T Consensus 254 ~~~~~~~~~~~~spdg~-----~l~~~~~~~~~~~~~v~~~d~~~g~~-----------------------~~~~~~~~~ 305 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDEN-----ILYVAEVNRAQNECKVNAYDAETGRF-----------------------VRTLFVETD 305 (706)
T ss_dssp SCTTCEEEEEEECTTSS-----EEEEEEECTTSCEEEEEEEETTTCCE-----------------------EEEEEEEEC
T ss_pred CCCceeEeeEEEECCCC-----EEEEEEeCCCCCeeEEEEEECCCCce-----------------------eeEEEEccC
Confidence 25778899999999999 899887665 899999887521 111110001
Q ss_pred cCCCCceEEEEecC--CCCEEEEEEcCCeEEEEECC-CceeEEEEeecCceeEE-EEEeeCCCEEEEEEccCC----cEE
Q 038577 261 SQAPSKVTACDYHR--GLDMVVVGFSNGVFGLYQMP-DFVCIHLLSISREKITT-AVFNELGNWLVFGCAKLG----QLL 332 (860)
Q Consensus 261 ~~~~~~v~~~~~~~--~~~~l~~~~~~g~i~~~~~~-~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~~~g----~i~ 332 (860)
......+.+++|+| +|++++++..+|.+.+|.+. ++.....+..+...+.. ++|+|+|+.+++++..++ .|.
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 11111245689999 99999999999988888876 66777777777767776 799999999998887765 677
Q ss_pred EEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCe
Q 038577 333 VWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADD----NKVKVWTVSSGF 382 (860)
Q Consensus 333 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~ 382 (860)
.||..++.. ..+ .+...+.+++|+|+|++++....+ +.|++||+.+++
T Consensus 386 ~~d~~~~~~-~~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 386 CIDIKGGKT-KDL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEETTCCCC-EES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEcCCCCc-eec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 777777652 233 366779999999999998876543 469999998877
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=1.1e-25 Score=260.60 Aligned_cols=368 Identities=10% Similarity=0.073 Sum_probs=264.5
Q ss_pred CeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCC---cEEEEEEccCCCCCccceEEEEcCC----
Q 038577 143 KVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRD---SVVGCFFSVDKKTDKVNRIYTIARD---- 215 (860)
Q Consensus 143 ~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~---~i~~~~~~~~~~~~~~~~l~s~~~d---- 215 (860)
.+.+++|+|||+++++ +.||.|++||+.++ .....+.+|.. .+.+++|+|||+ +|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g------~~~~~~~~~~~~~~~v~~~~~SpDg~-----~l~~~~~~~~~~ 85 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETN------TSTVLIEGKKIESLRAIRYEISPDRE-----YALFSYNVEPIY 85 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGC------CCEEEECTTTTTTTTCSEEEECTTSS-----EEEEEESCCCCS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCC------cEEEEeccccccccccceEEECCCCC-----EEEEEecCccce
Confidence 4678899999997776 78999999999988 44556666654 489999999999 99998764
Q ss_pred -----ccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEE
Q 038577 216 -----CYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGL 290 (860)
Q Consensus 216 -----g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~ 290 (860)
+.+++||+.++... .......+...+..++|+|||+.|+.++. +.|++
T Consensus 86 ~~~~~~~i~~~d~~~~~~~--------------------------~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~ 138 (723)
T 1xfd_A 86 QHSYTGYYVLSKIPHGDPQ--------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYY 138 (723)
T ss_dssp SSCCCSEEEEEESSSCCCE--------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEE
T ss_pred eecceeeEEEEECCCCceE--------------------------eccCCccccccccccEECCCCCEEEEEEC-CeEEE
Confidence 78889999875420 01111233345788999999999999886 79999
Q ss_pred EECCCceeEEEEeecCcee------------------EEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCe
Q 038577 291 YQMPDFVCIHLLSISREKI------------------TTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDV 352 (860)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i------------------~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v 352 (860)
|++.+++.......+...+ .+++|+|||+.|+++..+++.+.+|++.... ..+...+
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~-----~~~~~~~ 213 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYT-----GSIYPTV 213 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCS-----SSSSCCC
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccC-----CcCCCcc
Confidence 9999888776655543333 7899999999999998877778888764322 1233457
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecC------CCceEEEEEeeCCCEEEEEeC----CCcEEEEEccc
Q 038577 353 NCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEH------TNAVTALHFMANNHSLLSASL----DGTVRAWDLFR 422 (860)
Q Consensus 353 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~i~~~~~~~~l~s~~~----dg~i~~wd~~~ 422 (860)
..+.|.++|.. ..+..|++||+.+++....+..+ ...+..++|+|||+.+++... +..|++||+.+
T Consensus 214 ~~~~~~~~G~~----~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 214 KPYHYPKAGSE----NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp EEEECCBTTSC----CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT
T ss_pred eeccCCCCCCC----CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC
Confidence 88889888763 33458999999988865666554 567899999999998876643 35799999998
Q ss_pred cceeeEeeCCCCCcE----EEEEECCCCCEEEEE-ecCCC------eEEEEE-CCCCce--EEEecCcccCeEE-EEEcC
Q 038577 423 YRNFRTFTTPSSRQF----VSLASDQSGEVICAG-TLDSF------EIFVWS-MKTGRL--LDILSGHEGPVHG-LVFSP 487 (860)
Q Consensus 423 ~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~-~~~~~------~i~v~d-~~~~~~--~~~~~~h~~~v~~-l~~s~ 487 (860)
++....+.......+ ..++|+|||+.|+.. +...+ .|++|| ..+++. ...+..+...+.. ++|+|
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~sp 369 (723)
T 1xfd_A 290 GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDE 369 (723)
T ss_dssp CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEET
T ss_pred CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcC
Confidence 887665543322222 367999999988765 44433 588888 444441 4445444444554 69999
Q ss_pred CCCEEEEEeCC---CcEEEEEccCCc--ceeEEcc---cCCCeEEEEEeeCCCEEEEEeCCC---eEEEEeCCCCceeEE
Q 038577 488 TNATLASSSWD---KTVRLWNVFEGK--GSVESFP---HTHDVLTVVYRPDGRQLACSTLDG---QIHFWDPLNGELMYT 556 (860)
Q Consensus 488 ~~~~l~s~~~d---g~i~iwd~~~~~--~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~~~ 556 (860)
||+.|+..+.+ +.+++|++.... ....+.. +...+..++|+|||++++.....- ...+++..+++.+..
T Consensus 370 dg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~~~~~ 449 (723)
T 1xfd_A 370 KGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFD 449 (723)
T ss_dssp TTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEE
T ss_pred CCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCCEEEE
Confidence 99999876665 789999986542 1222222 567789999999999888764332 245567767766655
Q ss_pred Ee
Q 038577 557 IE 558 (860)
Q Consensus 557 ~~ 558 (860)
+.
T Consensus 450 ~~ 451 (723)
T 1xfd_A 450 LE 451 (723)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=3.7e-24 Score=246.81 Aligned_cols=317 Identities=9% Similarity=0.083 Sum_probs=227.6
Q ss_pred CeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeE--EEEeecC-----------------CceeEEEECCCCCEEEEEeCC
Q 038577 54 NICRIAVSPDGTFLLTVDENQRCHFINLHCHVV--LHRVRFK-----------------YPVNAILFSPNGKYIAVGTGK 114 (860)
Q Consensus 54 ~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~--~~~~~~~-----------------~~v~~~~fspdg~~la~~~~~ 114 (860)
.+..+.|+ |+.+++.+.++ | +||+.+++. ...+.+. ..|.+++|||| +.++++.++
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~~~ 101 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFTQG 101 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEETT
T ss_pred cCCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEECC
Confidence 35667788 56677777777 8 999999987 3444432 56999999999 788888889
Q ss_pred eEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecc-----cccCcccccceEeecCC
Q 038577 115 LVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKE-----KLKGIHTNKPFLLLGHR 189 (860)
Q Consensus 115 ~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~-----~~~~~~~~~~~~~~~h~ 189 (860)
.|++||+.+++ ...+..+...+.+++|||||++|+++ .|+.|++|++.+ + ........+.
T Consensus 102 ~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g------~~~~~~~~~~ 166 (706)
T 2z3z_A 102 GLVGFDMLARK--------VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS------RAIAVTIDGT 166 (706)
T ss_dssp EEEEEETTTTE--------EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC------CCEESCSCCB
T ss_pred EEEEEECCCCc--------eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC------CcEEeccCCC
Confidence 99999998875 34556677889999999999999985 679999999987 6 2222222222
Q ss_pred Cc--------------EEEEEEccCCCCCccceEEEEc---------------------------------CCccEEEee
Q 038577 190 DS--------------VVGCFFSVDKKTDKVNRIYTIA---------------------------------RDCYMFSWG 222 (860)
Q Consensus 190 ~~--------------i~~~~~~~~~~~~~~~~l~s~~---------------------------------~dg~i~~w~ 222 (860)
.. +.++.|+||++ +|++++ .+..|++||
T Consensus 167 ~~~~~g~~~~~ee~~~~~~~~~SpDg~-----~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 167 ETLVYGQAVHQREFGIEKGTFWSPKGS-----CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp TTEEESSCCGGGCTTCCCSEEECTTSS-----EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred CCeEcccchhhhhcCCCceEEECCCCC-----EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 22 47899999999 899887 345677777
Q ss_pred ecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCC-----eEEEEECCCce
Q 038577 223 FSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNG-----VFGLYQMPDFV 297 (860)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g-----~i~~~~~~~~~ 297 (860)
+.++.. ........+...+.+++|+|+|+.++++..++ .|.+||+.+++
T Consensus 242 ~~~~~~--------------------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 242 LATGKT--------------------------VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp TTTTEE--------------------------EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred CCCCce--------------------------EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence 765421 00011123556789999999999999988775 99999999884
Q ss_pred eEEEEe-ec-Cc---eeEEEEEee--CCCEEEEEEccCCcEEEEEcc-CceEEEEecCcccCeEE-EEEcCCCCEEEEEe
Q 038577 298 CIHLLS-IS-RE---KITTAVFNE--LGNWLVFGCAKLGQLLVWEWR-SESYILKQQGHYFDVNC-LAYSPDSQLLATGA 368 (860)
Q Consensus 298 ~~~~~~-~~-~~---~i~~~~~s~--~~~~l~~~~~~~g~i~v~d~~-~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~ 368 (860)
....+. .. .. .+..++|+| ||+.++++ ..++.+.+|.+. ++.....+..+...+.. ++|+|+|+.|+.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~-~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 296 FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQS-RRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEE-CTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE
T ss_pred eeeEEEEccCCCeECccCCceeecCCCCEEEEEE-ccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe
Confidence 333332 22 21 246789999 99876655 445888999876 56667777777777876 79999999887665
Q ss_pred CC-C----cEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCC----CcEEEEEccccc
Q 038577 369 DD-N----KVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLD----GTVRAWDLFRYR 424 (860)
Q Consensus 369 ~d-g----~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~~wd~~~~~ 424 (860)
.+ + .|..||..++. ...+. |...+.+++|+|++++++..+.+ +.+.+||+.+++
T Consensus 375 ~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 375 TEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred cCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 54 3 67777777765 33443 67789999999999988876543 459999998776
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=1.1e-23 Score=218.44 Aligned_cols=287 Identities=11% Similarity=0.112 Sum_probs=213.5
Q ss_pred EEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCee-EEEeec
Q 038577 312 AVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGAD-DNKVKVWTVSSGFC-FVTFTE 389 (860)
Q Consensus 312 ~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~~~ 389 (860)
..|.+++..++++...++.|.+||..+++.......+...+ +++|+|+|+++++++. ++.|.+||..+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 45677788888888888999999999999888777666666 9999999997766665 88999999999987 777776
Q ss_pred CCCceEEEEEeeCCCEEEEEeCCC---cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCe-EEEEECC
Q 038577 390 HTNAVTALHFMANNHSLLSASLDG---TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFE-IFVWSMK 465 (860)
Q Consensus 390 ~~~~v~~i~~~~~~~~l~s~~~dg---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-i~v~d~~ 465 (860)
+..+..+++|+|++++++++..++ .|.+||+.+++....+.... ....++++|+|++++++..+.+. +.+|++.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY--DAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT--TEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC--CccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 766666699999999999555553 89999999998887776543 46899999999977776655337 9999987
Q ss_pred CCceE----EEecCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcc---eeEEcccCCCeEEEEEeeCCCEEEEE
Q 038577 466 TGRLL----DILSGHEGPVHGLVFSPTNATLASSS-WDKTVRLWNVFEGKG---SVESFPHTHDVLTVVYRPDGRQLACS 537 (860)
Q Consensus 466 ~~~~~----~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~ 537 (860)
....+ .....+...+..++|+|+|++++.++ .++.|++||+.+++. ...+ .....+..++|+|||++++++
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV-GTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE-ECSSCCCCEEECTTSSEEEEE
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec-cCCCCCceEEECCCCCEEEEE
Confidence 54332 11223445689999999999665554 689999999998875 3333 345677899999999987766
Q ss_pred e-CCCeEEEEeCCCCce--eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec-CCCeEEEEECCCc
Q 038577 538 T-LDGQIHFWDPLNGEL--MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG-SSKYICMYDVADQ 613 (860)
Q Consensus 538 ~-~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~-~dg~v~vwd~~~~ 613 (860)
+ .++.|.+||+.+++. +..+......... .......++|+|||++|++++ .++.|.+||+.+.
T Consensus 239 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 239 TESTVDVFNFNQLSGTLSFVKSFGHGLLIDPR-------------PLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCCCCCCG-------------GGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EcCCCEEEEEECCCCceeeecccccccccCCC-------------CcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 5 477899999999887 4333322100000 001136689999999886555 5679999999876
Q ss_pred eE
Q 038577 614 VL 615 (860)
Q Consensus 614 ~~ 615 (860)
..
T Consensus 306 ~~ 307 (331)
T 3u4y_A 306 VV 307 (331)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=6.4e-23 Score=215.05 Aligned_cols=273 Identities=12% Similarity=0.070 Sum_probs=227.4
Q ss_pred CceEEEEecCCCCEEEEEEc-------CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc
Q 038577 265 SKVTACDYHRGLDMVVVGFS-------NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 265 ~~v~~~~~~~~~~~l~~~~~-------~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~ 337 (860)
..+..++++|+++.+++++. ++.|.+||..+++....+.... .+..++|+|+|+.++++...++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 35789999999999988774 5689999999999888877643 578899999999998888878999999999
Q ss_pred CceEEEEecCcccC---------eEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEE
Q 038577 338 SESYILKQQGHYFD---------VNCLAYSPDSQLLATGA--DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSL 406 (860)
Q Consensus 338 ~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 406 (860)
+++.+..+..+... +.+++|+|+|+.+++++ .++.|.+||..+++....+..+...+.+++|+|+++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 99888777654322 68899999999887776 47889999999999998887667778999999999999
Q ss_pred EEEeCCCcEEEEEccccceeeEeeCC---CCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEE
Q 038577 407 LSASLDGTVRAWDLFRYRNFRTFTTP---SSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGL 483 (860)
Q Consensus 407 ~s~~~dg~i~~wd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l 483 (860)
++++.++.+.+||+.+++....+... ....+..++++|+|++++++..+.+.|.+||..+++.+..+.... ..++
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~ 277 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAV 277 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCE
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceE
Confidence 99999999999999999888777652 234577899999999998888775699999999999988877543 2679
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCC
Q 038577 484 VFSPTNATLASSS-WDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDG 541 (860)
Q Consensus 484 ~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 541 (860)
+|+|++++++.++ .++.|.+||..+++....+ .....+.+++|+|||++|+++..++
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF-DTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEEE-ECCSEEEEEEECTTSCEEEEEEECC
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCeEEEEE-ecCCCCCeEEEcCCCCEEEEEEccc
Confidence 9999999766555 6899999999988754443 4445789999999999888877664
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=5.3e-23 Score=213.38 Aligned_cols=279 Identities=10% Similarity=0.056 Sum_probs=212.3
Q ss_pred EecCCCCE-EEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceE-EEEecCc
Q 038577 271 DYHRGLDM-VVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESY-ILKQQGH 348 (860)
Q Consensus 271 ~~~~~~~~-l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~-~~~~~~~ 348 (860)
.|.++++. +++...++.|.+||..+++....+..+...+ .++|+|+|+.+++++..++.|.+||..+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 34555555 5677788999999999999988888776677 9999999999998888779999999999887 6666666
Q ss_pred ccCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEE-eCCCc-EEEEEcccc
Q 038577 349 YFDVNCLAYSPDSQLLATGADDN---KVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSA-SLDGT-VRAWDLFRY 423 (860)
Q Consensus 349 ~~~v~~~~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~-i~~wd~~~~ 423 (860)
..+..+++|+|+|++++++..++ .|.+||+.+++.+..+.. ...+.+++|+|++++++++ ..++. +.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 66665599999999999655553 899999999998887764 4557999999999866554 55588 999998754
Q ss_pred ceeeE---eeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCce---EEEecCcccCeEEEEEcCCCCEEEEEe-
Q 038577 424 RNFRT---FTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRL---LDILSGHEGPVHGLVFSPTNATLASSS- 496 (860)
Q Consensus 424 ~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~---~~~~~~h~~~v~~l~~s~~~~~l~s~~- 496 (860)
..... ...........++++|+|++++++...++.|.+||+.+++. +..+.. ...+.+++|+|+|++++.++
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEc
Confidence 33211 11133445789999999998877776555999999999998 777764 46678999999999776655
Q ss_pred CCCcEEEEEccCCcc--eeEEccc----C---CCeEEEEEeeCCCEEEEEeC-CCeEEEEeCCCCc
Q 038577 497 WDKTVRLWNVFEGKG--SVESFPH----T---HDVLTVVYRPDGRQLACSTL-DGQIHFWDPLNGE 552 (860)
Q Consensus 497 ~dg~i~iwd~~~~~~--~~~~~~~----~---~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~ 552 (860)
.++.|.+||+.+++. ......+ . .....++|+|||++|++++. ++.|.+||+.+..
T Consensus 241 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 241 STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 478899999988764 1111111 1 22356899999998876655 5699999997654
No 142
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=2.5e-24 Score=248.65 Aligned_cols=329 Identities=10% Similarity=0.047 Sum_probs=232.0
Q ss_pred cEEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCcc---CeeEEEEcCCCCEEEEEcC---------CCcEEEEEccc
Q 038577 17 NAVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSS---NICRIAVSPDGTFLLTVDE---------NQRCHFINLHC 83 (860)
Q Consensus 17 ~~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~---~v~~va~spdg~~la~~~~---------d~~i~vwd~~~ 83 (860)
.+.|+ ||++++.+.++.|++||+.+++...++.+|.. .+.+++|||||++||+++. ++.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 68899 99877777788999999999998877755544 4999999999999999876 68999999999
Q ss_pred CeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCe-----------------EE
Q 038577 84 HVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKV-----------------TA 146 (860)
Q Consensus 84 ~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v-----------------~~ 146 (860)
++.+........+.+++|||||++||++.++.|++|++.+++.. .....++...| .+
T Consensus 100 g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~------~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 100 GEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPF------QITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCE------ECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcE------EEecCCCcCCeEcccccceeeeecccCccc
Confidence 98742223346799999999999999999999999999887631 11112332222 58
Q ss_pred EEEcCCCCeEEEeecCC----------------------------------eEEEEeecccccCc---ccccceEeecCC
Q 038577 147 LNWSPDSNYLLVGSKDL----------------------------------AVRLFYVKEKLKGI---HTNKPFLLLGHR 189 (860)
Q Consensus 147 l~~s~d~~~l~s~~~dg----------------------------------~v~vwd~~~~~~~~---~~~~~~~~~~h~ 189 (860)
++|||||++|++++.|. .|++||+.++ ... .......+.+|.
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~~~~ 252 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP-AYVGPQEVPVPAMIASSD 252 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH-HHHCCEECCCCHHHHTSC
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC-CccceeEccCCccCCCCc
Confidence 99999999999987652 7889999877 110 000112245688
Q ss_pred CcEEEEEEccCCCCCccceEEEEcCC----ccEEEee----ecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccc-
Q 038577 190 DSVVGCFFSVDKKTDKVNRIYTIARD----CYMFSWG----FSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDF- 260 (860)
Q Consensus 190 ~~i~~~~~~~~~~~~~~~~l~s~~~d----g~i~~w~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 260 (860)
..+..++|+||++ .+++.... ..|.+|| ..++.. ...+
T Consensus 253 ~~~~~~~~SpD~~-----~~~~~~~~~~~~~~l~~~d~~~~~~~g~~----------------------------~~~~~ 299 (719)
T 1z68_A 253 YYFSWLTWVTDER-----VCLQWLKRVQNVSVLSICDFREDWQTWDC----------------------------PKTQE 299 (719)
T ss_dssp EEEEEEEESSSSE-----EEEEEEESSTTEEEEEEEEECSSSSSEEC----------------------------CGGGE
T ss_pred ceEEEeEEeCCCe-----EEEEEeccccCeEEEEEEcccCCCCCCce----------------------------EEEEe
Confidence 8999999999976 66664322 2477888 544322 1111
Q ss_pred ---cCCCCceE-----EEEecCCCCEEEE--EEcCC--eEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEcc-
Q 038577 261 ---SQAPSKVT-----ACDYHRGLDMVVV--GFSNG--VFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAK- 327 (860)
Q Consensus 261 ---~~~~~~v~-----~~~~~~~~~~l~~--~~~~g--~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~- 327 (860)
..+...+. .+.|+|+|+.++. ...+| .|.+|++.+++ ...+..+...+..+.++ +++.+++.+..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 300 HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCG
T ss_pred cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecC
Confidence 12333344 6789999997665 33444 57777876665 44555555567778888 99999888865
Q ss_pred ---CCcEEEEEccC--ce-EEEEec----CcccCeEEEEEcCCCCEEEEEe-CC--CcEEEEECCCCeeEEEe
Q 038577 328 ---LGQLLVWEWRS--ES-YILKQQ----GHYFDVNCLAYSPDSQLLATGA-DD--NKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 328 ---~g~i~v~d~~~--~~-~~~~~~----~~~~~v~~~~~s~~~~~l~~~~-~d--g~i~iwd~~~~~~~~~~ 387 (860)
++...+|.+.. +. ....+. +|...+..+.|+|+++.++..+ .. ..+.+||+.+++....+
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~ 450 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKIL 450 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEE
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEe
Confidence 57888888754 32 123332 2556788899999998777543 32 46888988777655444
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.1e-23 Score=215.91 Aligned_cols=277 Identities=11% Similarity=0.056 Sum_probs=224.4
Q ss_pred CEEEEEEcCCeEEEEECCCceeEEEEeecCc--eeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecC-c----c
Q 038577 277 DMVVVGFSNGVFGLYQMPDFVCIHLLSISRE--KITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQG-H----Y 349 (860)
Q Consensus 277 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~--~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~-~----~ 349 (860)
++++++..++.|.+||..+++.+..+..... .+..++|+|+|+.++++...++.|.+||+.+++.+..+.. + .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4688999999999999999998888775543 5789999999999988888779999999999888776643 2 2
Q ss_pred cCeEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEE
Q 038577 350 FDVNCLAYSPDSQLLATGA------------DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRA 417 (860)
Q Consensus 350 ~~v~~~~~s~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~ 417 (860)
..+.+++|+|+|++++++. .++.|.+||+.+++....+.. ...+.+++|+|++++++++ ++.+.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2577899999999998886 579999999999988877764 5567889999999988887 689999
Q ss_pred EEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCC-----------------------eEEEEECCCCceE-EEe
Q 038577 418 WDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSF-----------------------EIFVWSMKTGRLL-DIL 473 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------------------~i~v~d~~~~~~~-~~~ 473 (860)
||+.+++....+....... .+.++|++..+++....++ .|.+||+.+++.. ..+
T Consensus 159 ~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWEA--ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EETTTTEEEEEECSTTTTT--TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EECCCCcEeeeeeccccCC--CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 9999988877766544111 2267899987776655443 3689999998875 234
Q ss_pred cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCce
Q 038577 474 SGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 474 ~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
..+...+.+++|+|++++++++ ++.|++||+.+++..... .....+.+++|+|+|++|++++.++.|++||+.+++.
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee-cCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 4566778899999999999988 799999999888744433 3445678999999999999999999999999999999
Q ss_pred eEEEeccc
Q 038577 554 MYTIEGRR 561 (860)
Q Consensus 554 ~~~~~~~~ 561 (860)
+..+..+.
T Consensus 314 ~~~~~~~~ 321 (337)
T 1pby_B 314 KGQVDLPG 321 (337)
T ss_dssp EEEEECGG
T ss_pred EEEEEcCC
Confidence 88887654
No 144
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=1.2e-22 Score=213.06 Aligned_cols=271 Identities=12% Similarity=0.083 Sum_probs=219.0
Q ss_pred ceeEEEEEeeCCCEEEEEEcc------CCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEECC
Q 038577 307 EKITTAVFNELGNWLVFGCAK------LGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATG-ADDNKVKVWTVS 379 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~------~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~ 379 (860)
..+..++|+|+|+.+++++.. ++.|.+||..+++....+... ..+..++|+|+|+.++++ ..++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 457789999999999888854 578999999999888777543 347789999999966554 557999999999
Q ss_pred CCeeEEEeecCCCc---------eEEEEEeeCCCEEEEEe--CCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCE
Q 038577 380 SGFCFVTFTEHTNA---------VTALHFMANNHSLLSAS--LDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEV 448 (860)
Q Consensus 380 ~~~~~~~~~~~~~~---------v~~i~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (860)
+++.+..+..+... +.+++|+|+++.+++++ .++.|.+||..+++....+... ...+..++++|+|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKR 198 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC-CCccceEEECCCCCE
Confidence 99988887765432 78999999999877766 4788999999999888777632 224678899999999
Q ss_pred EEEEecCCCeEEEEECCCCceEEEecC----cccCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCcceeEEcccCCCeE
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILSG----HEGPVHGLVFSPTNATLASSSW-DKTVRLWNVFEGKGSVESFPHTHDVL 523 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~~----h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~ 523 (860)
++++..++ .+.+||+.+++....+.. +...+.+++|+|+++++++++. ++.|.+||+.+++......... ..
T Consensus 199 l~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~ 275 (353)
T 3vgz_A 199 LYTTNADG-ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SL 275 (353)
T ss_dssp EEEECTTS-EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CC
T ss_pred EEEEcCCC-eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--Cc
Confidence 99998877 999999999998877764 5566889999999998776665 4899999999887555444322 25
Q ss_pred EEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCC
Q 038577 524 TVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS 602 (860)
Q Consensus 524 ~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d 602 (860)
.++|+|+|+++++++ .++.|.+||+.+++.+..+.... .+.+++|+|||++|+++..+
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT---------------------HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS---------------------EEEEEEECTTSCEEEEEEEC
T ss_pred eEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC---------------------CCCeEEEcCCCCEEEEEEcc
Confidence 699999999776665 68999999999999988876654 37999999999988877665
Q ss_pred C
Q 038577 603 K 603 (860)
Q Consensus 603 g 603 (860)
+
T Consensus 335 ~ 335 (353)
T 3vgz_A 335 K 335 (353)
T ss_dssp C
T ss_pred c
Confidence 4
No 145
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=1.1e-22 Score=212.18 Aligned_cols=273 Identities=10% Similarity=0.087 Sum_probs=197.4
Q ss_pred EEEEE-EcCCeEEEEECC-Cc--eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc--Cce--EEEEecCcc
Q 038577 278 MVVVG-FSNGVFGLYQMP-DF--VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR--SES--YILKQQGHY 349 (860)
Q Consensus 278 ~l~~~-~~~g~i~~~~~~-~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~--~~~--~~~~~~~~~ 349 (860)
+++++ ..++.|.+|++. ++ +.+.. ..+...+..++|+|+|+.+++++.+++.+.+|++. ++. .+..+..+.
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence 44444 779999999985 33 23333 33556788999999999999998877999999997 444 333444333
Q ss_pred cCeEEEEEcCCCCEEEEEeC-CCcEEEEECC---CCeeEEEeecCCCceEEEEEeeCCCEEEEEe-CCCcEEEEEccc-c
Q 038577 350 FDVNCLAYSPDSQLLATGAD-DNKVKVWTVS---SGFCFVTFTEHTNAVTALHFMANNHSLLSAS-LDGTVRAWDLFR-Y 423 (860)
Q Consensus 350 ~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~---~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~~wd~~~-~ 423 (860)
.+..++|+|+++++++++. ++.|.+||+. .......+. ....+.+++|+|+++++++++ .++.|.+||+.+ +
T Consensus 85 -~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 85 -SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp -CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred -CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 7889999999998877665 8889999994 334444444 344688999999999888877 899999999987 5
Q ss_pred ceee----EeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCC--Cce--EEEec----Cc--ccCeEEEEEcCCC
Q 038577 424 RNFR----TFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKT--GRL--LDILS----GH--EGPVHGLVFSPTN 489 (860)
Q Consensus 424 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~--~~~--~~~~~----~h--~~~v~~l~~s~~~ 489 (860)
+... ....+....+..++++|+++++++++...+.+.+|++.. ++. ...+. ++ ...+.+++|+|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg 242 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 242 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC
Confidence 4332 334444457788999999998877764444999999953 443 22222 11 2356789999999
Q ss_pred CEEEEE-eCCCcEEEEEccC--Ccc-eeEEcccCCCeEEEEEeeCCCEEEEEe-CCCeEEEE--eCCCCce
Q 038577 490 ATLASS-SWDKTVRLWNVFE--GKG-SVESFPHTHDVLTVVYRPDGRQLACST-LDGQIHFW--DPLNGEL 553 (860)
Q Consensus 490 ~~l~s~-~~dg~i~iwd~~~--~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw--d~~~~~~ 553 (860)
++|+++ ..++.|.+||+.. +.. ..........+..++|+|+|++|++++ .++.|.+| |..+++.
T Consensus 243 ~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 243 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred CEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 987744 4789999999983 221 222222333488999999999998887 57999999 5556643
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=3.7e-22 Score=208.31 Aligned_cols=300 Identities=13% Similarity=0.088 Sum_probs=208.4
Q ss_pred CEEE-EEcCCCcEEEEEcc-cC--eEEEEeecCCceeEEEECCCCCEEEEEeC--CeEEEEeCC--CCCcccceeEEEEE
Q 038577 65 TFLL-TVDENQRCHFINLH-CH--VVLHRVRFKYPVNAILFSPNGKYIAVGTG--KLVQIWRSP--GFKKEVFAFELIRT 136 (860)
Q Consensus 65 ~~la-~~~~d~~i~vwd~~-~~--~~~~~~~~~~~v~~~~fspdg~~la~~~~--~~i~iwd~~--~~~~~~~~~~~~~~ 136 (860)
++++ +.+.++.|.+||+. ++ +.+..+.+...+.+++|+|+|++|+++.. +.|.+|++. +++. ..+..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-----~~~~~ 79 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-----TFAAE 79 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-----EEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-----eeccc
Confidence 3444 44779999999995 34 45556668889999999999998888833 899999998 4431 13344
Q ss_pred eeccCCCeEEEEEcCCCCeEEEeec-CCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEc-C
Q 038577 137 LADCNDKVTALNWSPDSNYLLVGSK-DLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA-R 214 (860)
Q Consensus 137 ~~~h~~~v~~l~~s~d~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~-~ 214 (860)
+..+. .+..++|+|++++|++++. ++.|.+||+..+... .....+. ....+.+++|+|+++ ++++++ .
T Consensus 80 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~---~~~~~~~-~~~~~~~~~~s~dg~-----~l~~~~~~ 149 (343)
T 1ri6_A 80 SALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPV---GVVDVVE-GLDGCHSANISPDNR-----TLWVPALK 149 (343)
T ss_dssp EECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEE---EEEEEEC-CCTTBCCCEECTTSS-----EEEEEEGG
T ss_pred cccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccc---ccccccc-CCCCceEEEECCCCC-----EEEEecCC
Confidence 44444 7899999999998877665 889999999522000 2233333 344588899999998 788777 8
Q ss_pred CccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeee-eccccCCCCceEEEEecCCCCEEEEEE-cCCeEEEEE
Q 038577 215 DCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLR-KDDFSQAPSKVTACDYHRGLDMVVVGF-SNGVFGLYQ 292 (860)
Q Consensus 215 dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~~ 292 (860)
++.+.+|++.+... ..... ..........+..++|+|++++++++. .++.+.+|+
T Consensus 150 ~~~v~~~d~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 150 QDRICLFTVSDDGH-----------------------LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp GTEEEEEEECTTSC-----------------------EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEecCCCc-----------------------eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 99999999976211 00000 011112334688899999999876655 789999999
Q ss_pred CCC--cee--EEEEee---c---CceeEEEEEeeCCCEEEEEEccCCcEEEEEcc----CceEEEEecCcccCeEEEEEc
Q 038577 293 MPD--FVC--IHLLSI---S---REKITTAVFNELGNWLVFGCAKLGQLLVWEWR----SESYILKQQGHYFDVNCLAYS 358 (860)
Q Consensus 293 ~~~--~~~--~~~~~~---~---~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~----~~~~~~~~~~~~~~v~~~~~s 358 (860)
+.. ++. ...... . ...+..++|+|+|++++++...++.+.+|++. ..+.+..+..+.. +.+++|+
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s 285 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVD 285 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEEC
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEEC
Confidence 953 332 222221 1 23566899999999999888777999999998 2344444544444 8899999
Q ss_pred CCCCEEEEEe-CCCcEEEEEC--CCCee--EEEeecCCCceEEEEEeeCCC
Q 038577 359 PDSQLLATGA-DDNKVKVWTV--SSGFC--FVTFTEHTNAVTALHFMANNH 404 (860)
Q Consensus 359 ~~~~~l~~~~-~dg~i~iwd~--~~~~~--~~~~~~~~~~v~~i~~~~~~~ 404 (860)
|+|+++++++ .++.|.+|++ .++.. +..+.. .....+++|.++.+
T Consensus 286 ~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 286 HSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp TTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred CCCCEEEEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 9999888887 5799999954 46543 333433 34566777777543
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=5.6e-23 Score=213.94 Aligned_cols=273 Identities=11% Similarity=0.079 Sum_probs=214.0
Q ss_pred EEEEEEccCCcEEEEEccCceEEEEecCccc--CeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeeEEEeecC-----C
Q 038577 320 WLVFGCAKLGQLLVWEWRSESYILKQQGHYF--DVNCLAYSPDSQLLA-TGADDNKVKVWTVSSGFCFVTFTEH-----T 391 (860)
Q Consensus 320 ~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~-----~ 391 (860)
+++++. .++.|.+||..+++.+..+..... .+..++|+|+|+.++ ++..++.|.+||+.+++.+..+... .
T Consensus 3 ~~v~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 3 YILAPA-RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEE-TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EEEEcC-CCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 344444 459999999999988877753322 478899999998664 5556789999999999888766532 1
Q ss_pred CceEEEEEeeCCCEEEEEe------------CCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeE
Q 038577 392 NAVTALHFMANNHSLLSAS------------LDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEI 459 (860)
Q Consensus 392 ~~v~~i~~~~~~~~l~s~~------------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 459 (860)
..+.+++|+|+++++++++ .++.|.+||+.+++....+... ..+..++++|+|++++++ ++ .|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~--~~-~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGL--GR-DL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEE--SS-SE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEe--CC-eE
Confidence 2577899999999988886 5799999999988887777653 346778899999988888 34 89
Q ss_pred EEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCC------------------------cEEEEEccCCcce-eE
Q 038577 460 FVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDK------------------------TVRLWNVFEGKGS-VE 514 (860)
Q Consensus 460 ~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg------------------------~i~iwd~~~~~~~-~~ 514 (860)
++||+.+++....+..+... ..+.|+|+++.++..+.++ .|.+||+.+++.. ..
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 235 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMRE 235 (337)
T ss_dssp EEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEE
T ss_pred EEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEee
Confidence 99999999988777654411 1237899998766554332 4689999988753 22
Q ss_pred EcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCC
Q 038577 515 SFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGS 594 (860)
Q Consensus 515 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~ 594 (860)
...+...+.+++|+|||++++++ ++.|++||+.+++.+..+.... .+.+++|+|||+
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~ 292 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH---------------------SYYSVNVSTDGS 292 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS---------------------CCCEEEECTTSC
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCC---------------------ceeeEEECCCCC
Confidence 23466678899999999999988 7899999999999888776543 268899999999
Q ss_pred EEEEecCCCeEEEEECCCceEEEEEeec
Q 038577 595 YILAGGSSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 595 ~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
+|++++.++.|.+||+.+++.+..+...
T Consensus 293 ~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 293 TVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred EEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 9999999999999999999999887654
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.3e-22 Score=206.94 Aligned_cols=257 Identities=13% Similarity=0.084 Sum_probs=201.2
Q ss_pred EcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCC-CCcccceeEEEEEeecc-CCCeEEE
Q 038577 70 VDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPG-FKKEVFAFELIRTLADC-NDKVTAL 147 (860)
Q Consensus 70 ~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~h-~~~v~~l 147 (860)
.+.++.|++||+.+++......|...|.+++|+|||++|+++.++.|++||+.+ ++. .....+| ...+.++
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~-------~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSP-------EKVDTGFATICNNDH 90 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSC-------EECCCTTCCCBCSCC
T ss_pred CCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCc-------eEeccccccccccce
Confidence 356899999999999988877899999999999999999999999999999998 763 3334455 4678999
Q ss_pred EEcCCCCeEEEee--cCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEE-EEcCCccEEEeeec
Q 038577 148 NWSPDSNYLLVGS--KDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIY-TIARDCYMFSWGFS 224 (860)
Q Consensus 148 ~~s~d~~~l~s~~--~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~-s~~~dg~i~~w~~~ 224 (860)
+|+||+++|++++ .++...+|.++.. . .....+..+. .+..++|+|+++ .++ +++.++.+.+|+++
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~-~----~~~~~~~~~~-~~~~~~~spdg~-----~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPST-G----GTPRLMTKNL-PSYWHGWSPDGK-----SFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETT-C----CCCEECCSSS-SEEEEEECTTSS-----EEEEEEEETTEEEEEEEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECC-C----CceEEeecCC-CccceEECCCCC-----EEEEEECCCCceEEEEEE
Confidence 9999999999998 4456777776543 1 1233344333 488899999998 776 77889999999976
Q ss_pred CCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEE-cCCeEEEEECC-CceeEEEE
Q 038577 225 GNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGF-SNGVFGLYQMP-DFVCIHLL 302 (860)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~~~~-~~~~~~~~ 302 (860)
.... ....+..+...+.+++|+|+++.+++++ .++.+.+|++. .+.....+
T Consensus 160 ~~~~---------------------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 160 IDSG---------------------------VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp TTTC---------------------------CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred CCCC---------------------------cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 4321 0122334556789999999999888776 48889999876 55666777
Q ss_pred eecCceeEEEEEeeCCCEEEEEEccC----------CcEEEEEccCceE--EEEecCcccCeEEEEEcCCCCEEEEEeCC
Q 038577 303 SISREKITTAVFNELGNWLVFGCAKL----------GQLLVWEWRSESY--ILKQQGHYFDVNCLAYSPDSQLLATGADD 370 (860)
Q Consensus 303 ~~~~~~i~~~~~s~~~~~l~~~~~~~----------g~i~v~d~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 370 (860)
..+...+..++|+|+|+++++++.+. +.|.+||+.+++. +....+|...+.+++|+|+++.|++++.+
T Consensus 213 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 213 TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 77778899999999999999887652 5699999988765 33444778889999999999999888765
Q ss_pred C
Q 038577 371 N 371 (860)
Q Consensus 371 g 371 (860)
.
T Consensus 293 ~ 293 (297)
T 2ojh_A 293 P 293 (297)
T ss_dssp C
T ss_pred c
Confidence 3
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=2.3e-22 Score=204.96 Aligned_cols=251 Identities=16% Similarity=0.089 Sum_probs=195.8
Q ss_pred CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEccc-CeEEEEee-c-CCceeEEEECCCCCE
Q 038577 31 GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHC-HVVLHRVR-F-KYPVNAILFSPNGKY 107 (860)
Q Consensus 31 ~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~-~~~~~~~~-~-~~~v~~~~fspdg~~ 107 (860)
++.|++||+.+++...+. .|...|.+++|||||++|++++ ++.|.+||+.+ ++...... + ...+.+++|+|||++
T Consensus 21 ~~~i~~~d~~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVW-QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CEEEEEEETTTTEEEEEE-EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred ceeEEEEeCCCCceeeec-cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 467999999999887655 6889999999999999999986 78999999999 87776655 2 467899999999999
Q ss_pred EEEEe-----CCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEE-EeecCCeEEEEeecccccCccccc
Q 038577 108 IAVGT-----GKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLL-VGSKDLAVRLFYVKEKLKGIHTNK 181 (860)
Q Consensus 108 la~~~-----~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~-s~~~dg~v~vwd~~~~~~~~~~~~ 181 (860)
|+++. ...|.+|+..++. ...+..+. .+..++|+||+++|+ +++.++.+++|+++.. . ..
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~-~----~~ 164 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGT--------PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID-S----GV 164 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCC--------CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETT-T----CC
T ss_pred EEEEEeCCCCcceEEEEECCCCc--------eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECC-C----Cc
Confidence 99985 2455556665554 23444443 489999999999887 6778999999998654 1 23
Q ss_pred ceEeecCCCcEEEEEEccCCCCCccceEEEEc-CCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccc
Q 038577 182 PFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA-RDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDF 260 (860)
Q Consensus 182 ~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (860)
...+..|...+.++.|+|+++ .++.++ .++.+.+|++..... ....+
T Consensus 165 ~~~~~~~~~~~~~~~~s~dg~-----~l~~~~~~~~~~~i~~~~~~~~---------------------------~~~~~ 212 (297)
T 2ojh_A 165 ETRLTHGEGRNDGPDYSPDGR-----WIYFNSSRTGQMQIWRVRVDGS---------------------------SVERI 212 (297)
T ss_dssp EEECCCSSSCEEEEEECTTSS-----EEEEEECTTSSCEEEEEETTSS---------------------------CEEEC
T ss_pred ceEcccCCCccccceECCCCC-----EEEEEecCCCCccEEEECCCCC---------------------------CcEEE
Confidence 456677888999999999998 777666 589999999873211 01223
Q ss_pred cCCCCceEEEEecCCCCEEEEEEcC-----------CeEEEEECCCceeE--EEEeecCceeEEEEEeeCCCEEEEEEcc
Q 038577 261 SQAPSKVTACDYHRGLDMVVVGFSN-----------GVFGLYQMPDFVCI--HLLSISREKITTAVFNELGNWLVFGCAK 327 (860)
Q Consensus 261 ~~~~~~v~~~~~~~~~~~l~~~~~~-----------g~i~~~~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~~ 327 (860)
..+...+.+++|+|++++|++++.+ +.|.+||+.+++.. ..+..+...+..++|+|+|+.+++++.+
T Consensus 213 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 213 TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 3445678899999999999988766 56999999887654 3444677789999999999999998876
Q ss_pred CC
Q 038577 328 LG 329 (860)
Q Consensus 328 ~g 329 (860)
++
T Consensus 293 ~~ 294 (297)
T 2ojh_A 293 PV 294 (297)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 150
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=7.2e-22 Score=227.53 Aligned_cols=365 Identities=11% Similarity=0.079 Sum_probs=242.9
Q ss_pred CcEEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCccC---e--eEEEEcCCCCEEEEEcCC---------CcEEEEE
Q 038577 16 GNAVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSSN---I--CRIAVSPDGTFLLTVDEN---------QRCHFIN 80 (860)
Q Consensus 16 ~~~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~~---v--~~va~spdg~~la~~~~d---------~~i~vwd 80 (860)
-++.|+ ||++++++ ++.|++||+.+++...++.+|... + ..++|||||++||+++.+ +.+.+||
T Consensus 20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 369999 99988887 899999999999988777777643 2 348899999999998765 5677999
Q ss_pred cccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCe----------------
Q 038577 81 LHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKV---------------- 144 (860)
Q Consensus 81 ~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v---------------- 144 (860)
+.+++......+...+..++|||||+.||.+.++.|++|+..+++.. ..+..++...+
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~------~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 99 LNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSY------RITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp TTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCE------ECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred CCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceE------EEcCCCCccceecCcccccccchhcCC
Confidence 99998765444778899999999999999999999999999887631 11122332222
Q ss_pred -EEEEEcCCCCeEEEeecCC-eEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEee
Q 038577 145 -TALNWSPDSNYLLVGSKDL-AVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWG 222 (860)
Q Consensus 145 -~~l~~s~d~~~l~s~~~dg-~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~ 222 (860)
..+.|||||++||.++.|. .+.+|++... .. .. ++...+..+.|.+.|. . .....+++||
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~-~~-----~~---~~~~~~~~~~yp~~G~-----~----~~~~~l~v~d 234 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFY-SD-----ES---LQYPKTVRVPYPKAGA-----V----NPTVKFFVVN 234 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEEC-CS-----TT---CSSCEEEEEECCBTTS-----C----CCEEEEEEEE
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEee-cC-----CC---CCCCcceeecCCCCcC-----c----CCeeEEEEEE
Confidence 3589999999999987654 4899988654 11 10 3555667778877775 2 2234788999
Q ss_pred ecC---CCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcC----CeEEEEECCC
Q 038577 223 FSG---NDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSN----GVFGLYQMPD 295 (860)
Q Consensus 223 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----g~i~~~~~~~ 295 (860)
+.+ +... ....+.....+.++...+..++|+|||+.++..... ..|.+||+.+
T Consensus 235 ~~~~~~~~~~--------------------~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 235 TDSLSSVTNA--------------------TSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp TTSCCSSSCC--------------------CEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CCCCCCCCcc--------------------eEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 887 4210 011111111122356678999999999977765443 3799999988
Q ss_pred ce----eE--EEE--eecCcee-----EEEEEeeCCCEEE-EEEccCC--cEEEEEccCceEEEEecCcccCeEEEEEcC
Q 038577 296 FV----CI--HLL--SISREKI-----TTAVFNELGNWLV-FGCAKLG--QLLVWEWRSESYILKQQGHYFDVNCLAYSP 359 (860)
Q Consensus 296 ~~----~~--~~~--~~~~~~i-----~~~~~s~~~~~l~-~~~~~~g--~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~ 359 (860)
++ +. ..+ ..+...+ ....|+|||+.++ ..+..+| .|++||..++.... +......+..+.. +
T Consensus 295 g~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~ 372 (740)
T 4a5s_A 295 SSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-L 372 (740)
T ss_dssp TTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-E
T ss_pred CccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-E
Confidence 76 22 111 2343333 3788999999988 6655544 57788887765543 3333445655542 3
Q ss_pred CCCEEEEEeCC-----C--cEEEEECCCCeeEEEeec----CCCceEEEEEeeCCCEEEEEeCC---CcEEEEEccccce
Q 038577 360 DSQLLATGADD-----N--KVKVWTVSSGFCFVTFTE----HTNAVTALHFMANNHSLLSASLD---GTVRAWDLFRYRN 425 (860)
Q Consensus 360 ~~~~l~~~~~d-----g--~i~iwd~~~~~~~~~~~~----~~~~v~~i~~~~~~~~l~s~~~d---g~i~~wd~~~~~~ 425 (860)
+++.++..+.. + .|...++..+.....+.. .......+.|+|++++++..... ..+.+++..+++.
T Consensus 373 d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~ 452 (740)
T 4a5s_A 373 TSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKG 452 (740)
T ss_dssp CSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEE
T ss_pred eCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcE
Confidence 46655544432 3 344445544433323432 23578899999999877655433 2466666655544
Q ss_pred ee
Q 038577 426 FR 427 (860)
Q Consensus 426 ~~ 427 (860)
.+
T Consensus 453 ~~ 454 (740)
T 4a5s_A 453 LR 454 (740)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=1.2e-22 Score=234.52 Aligned_cols=364 Identities=10% Similarity=0.032 Sum_probs=241.0
Q ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCC----ceeEEEECCCCCEEEEEe----------CCeEEEEeC
Q 038577 56 CRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKY----PVNAILFSPNGKYIAVGT----------GKLVQIWRS 121 (860)
Q Consensus 56 ~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~----~v~~~~fspdg~~la~~~----------~~~i~iwd~ 121 (860)
..++|+|||+++++ +.|++|++||+.+++....+.+.. .+.+++|||||++||++. ++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 47899999976555 468999999999999887776432 499999999999999883 489999999
Q ss_pred CCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCccc----ccceEeecCCCcE-----
Q 038577 122 PGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHT----NKPFLLLGHRDSV----- 192 (860)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~----~~~~~~~~h~~~i----- 192 (860)
.+++... . ..+ ...+..++|||||+.||++. ++.|++|++.++ ..... .....+.+|...+
T Consensus 98 ~~g~~~~-~----~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g-~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 98 SNGEFVR-G----NEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD-PPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp TTTEECC-S----SCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS-CCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred CCCcccc-c----eec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCC-CcEEEecCCCcCCeEcccccceeeeec
Confidence 9875200 0 111 25688999999999999986 789999999876 11000 0001112222222
Q ss_pred ----EEEEEccCCCCCccceEEEEcCC-ccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCce
Q 038577 193 ----VGCFFSVDKKTDKVNRIYTIARD-CYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKV 267 (860)
Q Consensus 193 ----~~~~~~~~~~~~~~~~l~s~~~d-g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 267 (860)
.+++|+|||+ +|++++.| +.+.+|.+..... .....+
T Consensus 168 ~~~~~~~~wSPDG~-----~la~~~~d~~~~~~~~~~~~~~---------------------------------~~~~~~ 209 (719)
T 1z68_A 168 LATKYALWWSPNGK-----FLAYAEFNDTDIPVIAYSYYGD---------------------------------EQYPRT 209 (719)
T ss_dssp TCSSCCEEECTTSS-----EEEEEEEECTTSCEEEEEECCS---------------------------------SSSCEE
T ss_pred ccCcccEEECCCCC-----EEEEEEECCCCCceEEeeccCC---------------------------------CCCccc
Confidence 4899999999 89988765 4455554432110 112234
Q ss_pred EEEEecCCCCEEEEEEcCCeEEEEECCCceeE--EE------EeecCceeEEEEEeeCCCEEEEEEccC---CcEEEEE-
Q 038577 268 TACDYHRGLDMVVVGFSNGVFGLYQMPDFVCI--HL------LSISREKITTAVFNELGNWLVFGCAKL---GQLLVWE- 335 (860)
Q Consensus 268 ~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~--~~------~~~~~~~i~~~~~s~~~~~l~~~~~~~---g~i~v~d- 335 (860)
..+.+.+.|.. .....|++||+.+++.. .. +..+...+..++|+||++.+++..... ..|.+||
T Consensus 210 ~~~~yp~~g~~----~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~ 285 (719)
T 1z68_A 210 INIPYPKAGAK----NPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDF 285 (719)
T ss_dssp EEEECCBTTSC----CCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEE
T ss_pred eeecCCCCCCC----CCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcc
Confidence 44555444431 12347899999887653 11 223566789999999977655543321 2488899
Q ss_pred ---ccCceEEEEe----cCcccCeE-----EEEEcCCCCEEEE--EeCCC--cEEEEECCCCeeEEEeecCCCceEEEEE
Q 038577 336 ---WRSESYILKQ----QGHYFDVN-----CLAYSPDSQLLAT--GADDN--KVKVWTVSSGFCFVTFTEHTNAVTALHF 399 (860)
Q Consensus 336 ---~~~~~~~~~~----~~~~~~v~-----~~~~s~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~i~~ 399 (860)
..+++..... ..|...+. .++|+|||+.++. ...+| .|.+|++.++. ...+..+...+..+.+
T Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~ 364 (719)
T 1z68_A 286 REDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFR 364 (719)
T ss_dssp CSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEE
T ss_pred cCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEE
Confidence 7777654433 35666666 7899999996654 44555 57777877666 4456666667888887
Q ss_pred eeCCCEEEEEeCC-----CcEEEEEccc--cc-eeeEeeCC---CCCcEEEEEECCCCCEEEEEecC--CCeEEEEECCC
Q 038577 400 MANNHSLLSASLD-----GTVRAWDLFR--YR-NFRTFTTP---SSRQFVSLASDQSGEVICAGTLD--SFEIFVWSMKT 466 (860)
Q Consensus 400 ~~~~~~l~s~~~d-----g~i~~wd~~~--~~-~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~--~~~i~v~d~~~ 466 (860)
+ +++.++..+.+ +..++|.+.. +. ....+... +...+..+.|+|++++++....+ ...+++||+.+
T Consensus 365 ~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~ 443 (719)
T 1z68_A 365 V-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRT 443 (719)
T ss_dssp E-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSS
T ss_pred E-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCC
Confidence 7 88777766654 7888998764 32 12333221 33456788999999887764332 13788999888
Q ss_pred CceEEEec
Q 038577 467 GRLLDILS 474 (860)
Q Consensus 467 ~~~~~~~~ 474 (860)
++....+.
T Consensus 444 g~~~~~~~ 451 (719)
T 1z68_A 444 DQEIKILE 451 (719)
T ss_dssp CCEEEEEE
T ss_pred CCEEEEee
Confidence 87655443
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=1.1e-20 Score=197.25 Aligned_cols=270 Identities=11% Similarity=0.034 Sum_probs=190.4
Q ss_pred CCeEEEEEC--CCceeEE-EEeecCceeEEEEEeeCCCEEEEEEcc--CCcEEEEEccCce--EEEEecCcccCeEEEEE
Q 038577 285 NGVFGLYQM--PDFVCIH-LLSISREKITTAVFNELGNWLVFGCAK--LGQLLVWEWRSES--YILKQQGHYFDVNCLAY 357 (860)
Q Consensus 285 ~g~i~~~~~--~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~~--~g~i~v~d~~~~~--~~~~~~~~~~~v~~~~~ 357 (860)
++.|.+|.+ .+++... ....+...+..++|+|+|+ +++++.. ++.|.+|++.++. .+.....+...+..++|
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~ 93 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV 93 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE
Confidence 345666655 4455433 2333456778899999999 6665542 5899999998765 33444456777899999
Q ss_pred cCCCCEEEEEe-CCCcEEEEECCC-C--eeEEEeec---------CCCceEEEEEeeCCCEEEEEeCCCcEEEEEcc-cc
Q 038577 358 SPDSQLLATGA-DDNKVKVWTVSS-G--FCFVTFTE---------HTNAVTALHFMANNHSLLSASLDGTVRAWDLF-RY 423 (860)
Q Consensus 358 s~~~~~l~~~~-~dg~i~iwd~~~-~--~~~~~~~~---------~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~-~~ 423 (860)
+|+|++|++++ .++.|.+|++.. + ..+..+.. +...+.+++|+|+++.+++...++.|.+|++. ++
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTS
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCC
Confidence 99999888887 678999999963 3 22333321 12248899999999966666678899999998 44
Q ss_pred cee--eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCC--Cce--EEEecCcc------cCeEEEEEcCCCCE
Q 038577 424 RNF--RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKT--GRL--LDILSGHE------GPVHGLVFSPTNAT 491 (860)
Q Consensus 424 ~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~--~~~--~~~~~~h~------~~v~~l~~s~~~~~ 491 (860)
+.. ..+.......+..++|+|+|++++++...++.+.+|++.. ++. +..+.... ..+..++|+|||++
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 322 2233444446788999999998888766555999999874 543 22333222 34889999999998
Q ss_pred E-EEEeCCCcEEEEEccCC---cceeEEcccCCCeEEEEEeeCCCEEEEEeCC-CeEEEE--eCCCCceeE
Q 038577 492 L-ASSSWDKTVRLWNVFEG---KGSVESFPHTHDVLTVVYRPDGRQLACSTLD-GQIHFW--DPLNGELMY 555 (860)
Q Consensus 492 l-~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~iw--d~~~~~~~~ 555 (860)
| ++...++.|.+|++... +.......+...+..++|+|||++|++++.+ +.|.+| |..+|+...
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 7 55566899999999732 2223333455678999999999999888765 899999 666776653
No 153
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=1.7e-20 Score=216.19 Aligned_cols=365 Identities=11% Similarity=0.076 Sum_probs=243.1
Q ss_pred ccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-cCC-----ceeEEEECCCCCEEEEEeC----------Ce
Q 038577 52 SSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-FKY-----PVNAILFSPNGKYIAVGTG----------KL 115 (860)
Q Consensus 52 ~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~~~-----~v~~~~fspdg~~la~~~~----------~~ 115 (860)
.....+++|+|||++++++ |++|++||+.+++....+. +.. ...+++|||||++|+++.+ +.
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 3456789999999999986 8999999999999877766 322 2244899999999999844 67
Q ss_pred EEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcE---
Q 038577 116 VQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSV--- 192 (860)
Q Consensus 116 i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i--- 192 (860)
+.+||+.+++ ...+..|.+.+..++|||||+.||.+. ++.|.+|++.++ .. ...+..++...+
T Consensus 94 ~~~~d~~~~~--------~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~-~~----~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 94 YDIYDLNKRQ--------LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL-PS----YRITWTGKEDIIYNG 159 (740)
T ss_dssp EEEEETTTTE--------ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS-CC----EECCSCCBTTTEEES
T ss_pred EEEEECCCCc--------EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC-ce----EEEcCCCCccceecC
Confidence 8899999986 345777888999999999999999884 689999999876 11 111122332222
Q ss_pred --------------EEEEEccCCCCCccceEEEEcCCcc-EEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeee
Q 038577 193 --------------VGCFFSVDKKTDKVNRIYTIARDCY-MFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRK 257 (860)
Q Consensus 193 --------------~~~~~~~~~~~~~~~~l~s~~~dg~-i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (860)
..+.|||||+ +|+..+.|.+ +.+|++.....
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~-----~la~~~~d~~~v~~~~~~~~~~----------------------------- 205 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGT-----FLAYAQFNDTEVPLIEYSFYSD----------------------------- 205 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSS-----EEEEEEEECTTCCEEEEEECCS-----------------------------
T ss_pred cccccccchhcCCCcceEECCCCC-----EEEEEEEcccCCceEEEEeecC-----------------------------
Confidence 3489999999 8988876654 77777653211
Q ss_pred ccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCC---ce--eEEEEee------cCceeEEEEEeeCCCEEEEEEc
Q 038577 258 DDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPD---FV--CIHLLSI------SREKITTAVFNELGNWLVFGCA 326 (860)
Q Consensus 258 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~---~~--~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~ 326 (860)
...+...+..+.+.+.|.. .....|.+||+.+ ++ ....+.. +...+..++|+|||+.++....
T Consensus 206 --~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~ 279 (740)
T 4a5s_A 206 --ESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLR 279 (740)
T ss_dssp --TTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEE
T ss_pred --CCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeC
Confidence 0012234566666666643 1223689999988 73 2333332 5667899999999997776654
Q ss_pred cC---CcEEEEEccCce----EE--EEe--cCcccCeE-----EEEEcCCCCEEE-EEeC-C--CcEEEEECCCCeeEEE
Q 038577 327 KL---GQLLVWEWRSES----YI--LKQ--QGHYFDVN-----CLAYSPDSQLLA-TGAD-D--NKVKVWTVSSGFCFVT 386 (860)
Q Consensus 327 ~~---g~i~v~d~~~~~----~~--~~~--~~~~~~v~-----~~~~s~~~~~l~-~~~~-d--g~i~iwd~~~~~~~~~ 386 (860)
.. ..|.+||+.+++ +. ..+ ..|...+. ..+|+|||+.++ ..+. + ..|++||..++... .
T Consensus 280 r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~ 358 (740)
T 4a5s_A 280 RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-F 358 (740)
T ss_dssp SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-E
T ss_pred CCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-e
Confidence 32 369999998876 11 111 34544443 788999999877 6653 3 36888898766555 3
Q ss_pred eecCCCceEEEEEeeCCCEEEEEeCC-----CcEEEEE--ccccceeeEeeCC---CCCcEEEEEECCCCCEEEEEecC-
Q 038577 387 FTEHTNAVTALHFMANNHSLLSASLD-----GTVRAWD--LFRYRNFRTFTTP---SSRQFVSLASDQSGEVICAGTLD- 455 (860)
Q Consensus 387 ~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~~wd--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~- 455 (860)
+......+..+.. ++++.++..+.. +...+|. +..+.....+... .........++|++++++.....
T Consensus 359 lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~ 437 (740)
T 4a5s_A 359 ITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGP 437 (740)
T ss_dssp SCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSB
T ss_pred cccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4444556666543 446655544432 3445554 4433332233322 23467889999999988766544
Q ss_pred -CCeEEEEECCCCceEEEec
Q 038577 456 -SFEIFVWSMKTGRLLDILS 474 (860)
Q Consensus 456 -~~~i~v~d~~~~~~~~~~~ 474 (860)
...+.+++..+++....+.
T Consensus 438 ~~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 438 GLPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp SSCEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEec
Confidence 2367788877776555443
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=7.5e-21 Score=198.87 Aligned_cols=272 Identities=11% Similarity=0.116 Sum_probs=201.3
Q ss_pred EEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcc-cCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeeEEEeec
Q 038577 312 AVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHY-FDVNCLAYSPDSQLLA-TGADDNKVKVWTVSSGFCFVTFTE 389 (860)
Q Consensus 312 ~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~ 389 (860)
+++++++..+++++. ++.|.+||..+++.+..+..+. ..+..++|+|+|+.++ ++..++.|.+||+.+++....+..
T Consensus 5 ~~~~~~~~~~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 5 PALKAGHEYMIVTNY-PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCTTCEEEEEEET-TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred ccccCCCEEEEEeCC-CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 456666666666655 4999999999998887775443 2578899999998665 455689999999999988877754
Q ss_pred CC------CceEEEEEeeCCCEEEEEeCC------------CcEEEEEccccce---eeEeeCCCCCcEEEEEECCCCCE
Q 038577 390 HT------NAVTALHFMANNHSLLSASLD------------GTVRAWDLFRYRN---FRTFTTPSSRQFVSLASDQSGEV 448 (860)
Q Consensus 390 ~~------~~v~~i~~~~~~~~l~s~~~d------------g~i~~wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 448 (860)
+. ..+.+++|+|+++++++++.+ +.|.+||+.+++. ...+..+ ..+.+++++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAADDGS- 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECTTSC-
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--CcccceeECCCCc-
Confidence 32 237889999999999988865 8999999988543 3333333 2577889999999
Q ss_pred EEEEecCCCeEEEEECCCCceEEEecCccc------------------------CeEEEEEcCCCCE-----------EE
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILSGHEG------------------------PVHGLVFSPTNAT-----------LA 493 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~------------------------~v~~l~~s~~~~~-----------l~ 493 (860)
+++++ + .|++||+.+++.+..+..+.. ....+++++++.. +.
T Consensus 161 l~~~~--~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 LYVAG--P-DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp EEEES--S-SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred EEEcc--C-cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 55543 2 599999999998877754320 3445677665421 11
Q ss_pred EEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEee-CCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCcccccc
Q 038577 494 SSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRP-DGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDR 572 (860)
Q Consensus 494 s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (860)
....++.+++|++. .+...+..++|+| ++++++++ ++.|.+||+.+++.+..+.....
T Consensus 238 ~~~~~~~~~~~~~~---------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~---------- 296 (349)
T 1jmx_B 238 VDLKTGKTHTQEFA---------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHT---------- 296 (349)
T ss_dssp EETTTCCEEEEEEE---------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSC----------
T ss_pred EeccCCcEEecccc---------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCC----------
Confidence 22233444444442 2556788999999 99999988 88999999999998887764432
Q ss_pred ccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeec
Q 038577 573 RSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 573 ~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
+.+++|+|||++|++++.++.|.+||+.+++.+..++.+
T Consensus 297 -----------~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 297 -----------YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp -----------CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred -----------ccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 678999999999998888999999999999999887653
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=2e-20 Score=195.22 Aligned_cols=266 Identities=12% Similarity=0.102 Sum_probs=184.3
Q ss_pred CcEEEEEcc--CceEEE-EecCcccCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCe--eEEEeecCCCceEEEEEe
Q 038577 329 GQLLVWEWR--SESYIL-KQQGHYFDVNCLAYSPDSQLLATGAD---DNKVKVWTVSSGF--CFVTFTEHTNAVTALHFM 400 (860)
Q Consensus 329 g~i~v~d~~--~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~ 400 (860)
+.+.+|++. +++... ....+...+..++|+|+|+ +++++. ++.|++|++.++. .+..+..+...+..++|+
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~s 94 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVD 94 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEEC
Confidence 567777654 455433 2234556678899999999 555544 6899999997765 444545677888999999
Q ss_pred eCCCEEEEEe-CCCcEEEEEccc---cceeeEeeCCC--------CCcEEEEEECCCCCEEEEEecCCCeEEEEECC-CC
Q 038577 401 ANNHSLLSAS-LDGTVRAWDLFR---YRNFRTFTTPS--------SRQFVSLASDQSGEVICAGTLDSFEIFVWSMK-TG 467 (860)
Q Consensus 401 ~~~~~l~s~~-~dg~i~~wd~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~-~~ 467 (860)
|++++|++++ .++.+.+|++.. .+.+..+.... ...+.+++++|+|+ ++++....+.|++|++. ++
T Consensus 95 pdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g 173 (347)
T 3hfq_A 95 EARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAG 173 (347)
T ss_dssp TTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCC
Confidence 9999888887 678999999963 22333333221 22478899999999 55555444499999998 55
Q ss_pred ceEE--EecCc-ccCeEEEEEcCCCCEEEE-EeCCCcEEEEEccC--Ccce--eEEcccC------CCeEEEEEeeCCCE
Q 038577 468 RLLD--ILSGH-EGPVHGLVFSPTNATLAS-SSWDKTVRLWNVFE--GKGS--VESFPHT------HDVLTVVYRPDGRQ 533 (860)
Q Consensus 468 ~~~~--~~~~h-~~~v~~l~~s~~~~~l~s-~~~dg~i~iwd~~~--~~~~--~~~~~~~------~~v~~~~~s~~~~~ 533 (860)
+... .+..+ ...+..++|+|||+++++ ...++.|.+|++.. ++.. ....... ..+..++|+|||++
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 5432 22222 336788999999997665 45688999999875 3311 1111222 45889999999998
Q ss_pred EE-EEeCCCeEEEEeCCCC---ceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecC-CCeEEEE
Q 038577 534 LA-CSTLDGQIHFWDPLNG---ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGS-SKYICMY 608 (860)
Q Consensus 534 l~-~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~-dg~v~vw 608 (860)
|+ +...++.|.+|++... +.+..+..+. ..+..++|+|||++|++++. ++.|.+|
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~--------------------~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQISTEG--------------------DFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEEECSS--------------------SCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEEecCC--------------------CCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 85 4556899999998732 3333343322 23689999999999888775 4899999
Q ss_pred --ECCCceEE
Q 038577 609 --DVADQVLL 616 (860)
Q Consensus 609 --d~~~~~~~ 616 (860)
|..+|++.
T Consensus 314 ~~d~~tg~l~ 323 (347)
T 3hfq_A 314 ARDLTSGKLS 323 (347)
T ss_dssp EECTTTCCEE
T ss_pred EEeCCCCeEE
Confidence 55667655
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=7.1e-21 Score=199.06 Aligned_cols=284 Identities=11% Similarity=0.056 Sum_probs=208.4
Q ss_pred EEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecC-ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCc
Q 038577 270 CDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISR-EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGH 348 (860)
Q Consensus 270 ~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~ 348 (860)
+++++++..+++++.++.|.+||..+++....+..+. ..+..++|+|+|+.++++...++.|.+||+.+++....+..+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 4567888899999999999999999999888877554 257899999999988888777799999999999887766532
Q ss_pred ------ccCeEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCee---EEEeecCCCceEEEEEeeCCCEEE
Q 038577 349 ------YFDVNCLAYSPDSQLLATGADD------------NKVKVWTVSSGFC---FVTFTEHTNAVTALHFMANNHSLL 407 (860)
Q Consensus 349 ------~~~v~~~~~s~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~v~~i~~~~~~~~l~ 407 (860)
...+.+++|+|+|+++++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+++ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EE
Confidence 2337889999999999998865 8999999987433 33333 444688999999999 66
Q ss_pred EEeCCCcEEEEEccccceeeEeeCCCCC-----------------------cEEEEEECCCCCEEEEEecCCCeEEEEEC
Q 038577 408 SASLDGTVRAWDLFRYRNFRTFTTPSSR-----------------------QFVSLASDQSGEVICAGTLDSFEIFVWSM 464 (860)
Q Consensus 408 s~~~dg~i~~wd~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~i~v~d~ 464 (860)
+++. .|.+||+.+++....+...... ....+++++++............+..+|.
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 6544 4999999998877766543200 23446666554322111111112233555
Q ss_pred CCCceE-EEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCe
Q 038577 465 KTGRLL-DILSGHEGPVHGLVFSP-TNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQ 542 (860)
Q Consensus 465 ~~~~~~-~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 542 (860)
.+++.. ..+..+...+.+++|+| ++++++++ ++.|.+||+.+++...... ....+.+++|+|+|++|++++.++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 241 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSE
T ss_pred cCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-CCCCccceEECCCCCEEEEecCCCe
Confidence 555432 12233566788999999 99999888 8899999999887444433 4455789999999999999888999
Q ss_pred EEEEeCCCCceeEEEecc
Q 038577 543 IHFWDPLNGELMYTIEGR 560 (860)
Q Consensus 543 i~iwd~~~~~~~~~~~~~ 560 (860)
|++||+.+++.+..++..
T Consensus 318 v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 318 LAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEETTTTEEEEEEECS
T ss_pred EEEEeccccceeeeeecC
Confidence 999999999988887654
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=1.3e-21 Score=219.61 Aligned_cols=270 Identities=13% Similarity=0.116 Sum_probs=204.1
Q ss_pred CceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcc-cCeEEEEEcCCCCEEEEEeC---CCcEEEEECCC-
Q 038577 306 REKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHY-FDVNCLAYSPDSQLLATGAD---DNKVKVWTVSS- 380 (860)
Q Consensus 306 ~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~---dg~i~iwd~~~- 380 (860)
..++.+++|+|||+.|++++..+|.+.+|++.++.... +..|. ..+..++|+|| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 34799999999999999998867999999997766544 44444 67999999999 77777765 45556654432
Q ss_pred --CeeEEEeecCCCceEEEEEeeCCCE-EEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecC--
Q 038577 381 --GFCFVTFTEHTNAVTALHFMANNHS-LLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLD-- 455 (860)
Q Consensus 381 --~~~~~~~~~~~~~v~~i~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 455 (860)
+... .+... ..+...+|+|+++. +++.+.++.+.+||+.+++..+....+. .+++++|||++++.++.+
T Consensus 99 ~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 99 RPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp STTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEET
T ss_pred CCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCC
Confidence 3333 33322 23456788888853 3444455566699998887655544332 788999999999987765
Q ss_pred --CCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCC--cEEEEEccCCcceeEEcccCCCeEEEE-----
Q 038577 456 --SFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDK--TVRLWNVFEGKGSVESFPHTHDVLTVV----- 526 (860)
Q Consensus 456 --~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~----- 526 (860)
. .|++||+.+++.. .+..|.+.+..++|||||++|+++..++ .|++||+.+++.. ....+...+..++
T Consensus 173 ~~~-~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 173 GRV-SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp TEE-EEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEE
T ss_pred CCe-EEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccc
Confidence 4 7999999988865 6677888999999999999999888888 8999999988755 5556666666667
Q ss_pred ---EeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCC
Q 038577 527 ---YRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSK 603 (860)
Q Consensus 527 ---~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg 603 (860)
|+|||.++++++.+|.+++|++ |+..... . ..+.+++|+ ||+++++++.+.
T Consensus 250 ~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~---~--------------------~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREGRSAVFID--GERVEAP---Q--------------------GNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp EEEECTTSCEEEEEEETTEEEEEET--TEEECCC---S--------------------SEEEEEEEE-TTEEEEEEEETT
T ss_pred ceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccC---C--------------------CceEEEEec-CCEEEEEEcCCC
Confidence 9999999999999999999999 6554311 1 248899999 999999888764
Q ss_pred ---eEEEEECCC
Q 038577 604 ---YICMYDVAD 612 (860)
Q Consensus 604 ---~v~vwd~~~ 612 (860)
.+.+||..+
T Consensus 304 ~p~~l~~~d~~~ 315 (582)
T 3o4h_A 304 TPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEEETTCC
T ss_pred CCCeEEEEcCCC
Confidence 467777654
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=3.7e-19 Score=186.65 Aligned_cols=295 Identities=11% Similarity=0.124 Sum_probs=199.7
Q ss_pred CeEEEEEC--CCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCC----CcEEEEEccc--CeE--EEEee-cCCceeEEE
Q 038577 32 NRVSVTDL--IKSKTVTLPVESSSNICRIAVSPDGTFLLTVDEN----QRCHFINLHC--HVV--LHRVR-FKYPVNAIL 100 (860)
Q Consensus 32 ~~i~v~d~--~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d----~~i~vwd~~~--~~~--~~~~~-~~~~v~~~~ 100 (860)
+.|.+|++ .+++.......+...+..++|||||++|++++.+ +.|.+|++.. ++. +.... +......++
T Consensus 27 ~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~ 106 (361)
T 3scy_A 27 KGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLT 106 (361)
T ss_dssp CEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEE
T ss_pred CCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEE
Confidence 56888755 6777644332377888999999999999998875 7999999875 443 33333 455677788
Q ss_pred ECCCCCEEEEE--eCCeEEEEeCCCCCcccceeEEEEEeec--------cCCCeEEEEEcCCCCeEEEee-cCCeEEEEe
Q 038577 101 FSPNGKYIAVG--TGKLVQIWRSPGFKKEVFAFELIRTLAD--------CNDKVTALNWSPDSNYLLVGS-KDLAVRLFY 169 (860)
Q Consensus 101 fspdg~~la~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~--------h~~~v~~l~~s~d~~~l~s~~-~dg~v~vwd 169 (860)
+ ++++|+++ .++.|.+|++........... .....+ +...+.+++|+|||+++++++ .++.|.+|+
T Consensus 107 ~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~ 183 (361)
T 3scy_A 107 T--NGKNIVTANYSGGSITVFPIGQDGALLPASD-VIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFN 183 (361)
T ss_dssp E--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE-EEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred E--CCCEEEEEECCCCEEEEEEeCCCCcCcccce-eEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 8 88888877 578999999975432111111 111111 123458899999999776655 478999999
Q ss_pred eccccc----C-cccc--cceEeecCCCcEEEEEEccCCCCCccceEEEEc-CCccEEEeeecCCCCCCccccCCCCCCC
Q 038577 170 VKEKLK----G-IHTN--KPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA-RDCYMFSWGFSGNDGKIDETMEDSEPPS 241 (860)
Q Consensus 170 ~~~~~~----~-~~~~--~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~~~~~~~~~~~~~~~~~ 241 (860)
++.... . .... .......+...+..++|+|+++ ++++++ .++.|.+|++.++..
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-----~l~v~~~~~~~v~v~~~~~g~~------------- 245 (361)
T 3scy_A 184 INPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-----FAYLINEIGGTVIAFRYADGML------------- 245 (361)
T ss_dssp ECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-----EEEEEETTTCEEEEEEEETTEE-------------
T ss_pred EcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-----EEEEEcCCCCeEEEEEecCCce-------------
Confidence 986511 0 1000 0122334456678999999998 887777 689999999985421
Q ss_pred CCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcC--CeEEEEECC--Cce--eEEEEeecCceeEEEEEe
Q 038577 242 PGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSN--GVFGLYQMP--DFV--CIHLLSISREKITTAVFN 315 (860)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--g~i~~~~~~--~~~--~~~~~~~~~~~i~~~~~s 315 (860)
. .+........+......++|+|+|++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+
T Consensus 246 --------~--~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~s 314 (361)
T 3scy_A 246 --------D--EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIIT 314 (361)
T ss_dssp --------E--EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEEC
T ss_pred --------E--EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEEC
Confidence 0 111112223334557899999999999777665 899999985 344 3444444 4578899999
Q ss_pred eCCCEEEEEEccCCcEEEEEc--cCceEEEEe-cCcccCeEEEEEc
Q 038577 316 ELGNWLVFGCAKLGQLLVWEW--RSESYILKQ-QGHYFDVNCLAYS 358 (860)
Q Consensus 316 ~~~~~l~~~~~~~g~i~v~d~--~~~~~~~~~-~~~~~~v~~~~~s 358 (860)
|+|++++++...++.+.+|++ .+++..... ..+...+.|+.|.
T Consensus 315 pdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 315 PNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 999999999877799999655 466654433 2244568888875
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=1e-19 Score=190.85 Aligned_cols=279 Identities=12% Similarity=0.109 Sum_probs=193.0
Q ss_pred CCEEEEEEc----CCeEEEEEC--CCceeEEEEeecCceeEEEEEeeCCCEEEEEEcc---CCcEEEEEccC--ceE--E
Q 038577 276 LDMVVVGFS----NGVFGLYQM--PDFVCIHLLSISREKITTAVFNELGNWLVFGCAK---LGQLLVWEWRS--ESY--I 342 (860)
Q Consensus 276 ~~~l~~~~~----~g~i~~~~~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~---~g~i~v~d~~~--~~~--~ 342 (860)
..++++|+. ++.|.+|.+ .+++.......+...+..++|+|+|+.+++++.+ ++.+.+|++.. +.. +
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 345566643 467888866 4454433322256677889999999999988873 47999998875 433 3
Q ss_pred EEecCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeEEEe------ec--------CCCceEEEEEeeCCCEEE
Q 038577 343 LKQQGHYFDVNCLAYSPDSQLLATGA-DDNKVKVWTVSSGFCFVTF------TE--------HTNAVTALHFMANNHSLL 407 (860)
Q Consensus 343 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~------~~--------~~~~v~~i~~~~~~~~l~ 407 (860)
.....+......+++ +++++++++ .++.|.+|++.....+..+ .+ +...+.+++|+|++++++
T Consensus 93 ~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 93 NTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 333445556777887 788777766 5789999999754322111 11 123458899999999776
Q ss_pred EEe-CCCcEEEEEccccce------e------eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceE--EE
Q 038577 408 SAS-LDGTVRAWDLFRYRN------F------RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLL--DI 472 (860)
Q Consensus 408 s~~-~dg~i~~wd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~--~~ 472 (860)
+++ .++.+.+|++..... + .............++|+|+|++++++....+.|.+|++.+++.. ..
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 655 478999999875442 1 23344455567899999999999888864459999999877542 22
Q ss_pred e---cCcccCeEEEEEcCCCCEEEEEeCC--CcEEEEEcc--CCcc-eeEEcccCCCeEEEEEeeCCCEEEEEe-CCCeE
Q 038577 473 L---SGHEGPVHGLVFSPTNATLASSSWD--KTVRLWNVF--EGKG-SVESFPHTHDVLTVVYRPDGRQLACST-LDGQI 543 (860)
Q Consensus 473 ~---~~h~~~v~~l~~s~~~~~l~s~~~d--g~i~iwd~~--~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i 543 (860)
+ ..+.....+++|+|||++|+++..+ +.|.+|++. +++. ..........+..++|+|||++|++++ .++.|
T Consensus 251 ~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 251 VAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp EESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred EecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCE
Confidence 2 2334557899999999998776654 889999996 3331 111122255788999999999998887 67889
Q ss_pred EEE--eCCCCceeEE
Q 038577 544 HFW--DPLNGELMYT 556 (860)
Q Consensus 544 ~iw--d~~~~~~~~~ 556 (860)
.+| |..+++....
T Consensus 331 ~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 331 QIFERDQATGLLTDI 345 (361)
T ss_dssp EEEEECTTTCCEEEC
T ss_pred EEEEEECCCCcEeec
Confidence 995 5557766543
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=5.8e-21 Score=214.31 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=178.9
Q ss_pred ccCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCeeEEEeecCC-CceEEEEEeeCCCEEEEEeC---CCcEEEEEccc-
Q 038577 349 YFDVNCLAYSPDSQLLATGAD-DNKVKVWTVSSGFCFVTFTEHT-NAVTALHFMANNHSLLSASL---DGTVRAWDLFR- 422 (860)
Q Consensus 349 ~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s~~~---dg~i~~wd~~~- 422 (860)
..+|.+++|+|||+.||+++. ||++++|++.++...+ +..|. ..+..++|+|| +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 557999999999999999887 9999999997666544 44455 68999999999 77777765 45566766544
Q ss_pred -cceeeEeeCCCCCcEEEEEECCCCCEEE-EEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCC--
Q 038577 423 -YRNFRTFTTPSSRQFVSLASDQSGEVIC-AGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWD-- 498 (860)
Q Consensus 423 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d-- 498 (860)
......+.... .....+++|+|+.++ +...++ .+.+||+.+++.......+. .+++|||||++|++++.+
T Consensus 99 ~~g~~~~l~~~~--~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~ 172 (582)
T 3o4h_A 99 RPGEEQRLEAVK--PMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG 172 (582)
T ss_dssp STTCCEECTTSC--SBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET
T ss_pred CCCccccccCCC--CceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC
Confidence 22222333322 233557777776433 333333 56699999887766554333 889999999999988877
Q ss_pred --CcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCC--eEEEEeCCCCceeEEEecccccCCCcccccccc
Q 038577 499 --KTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDG--QIHFWDPLNGELMYTIEGRRDISGGRLMTDRRS 574 (860)
Q Consensus 499 --g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (860)
+.|++||+.+++ ...+..+...+..++|||||++|+++..++ .|++||+.+++.. .+..+.....
T Consensus 173 ~~~~i~~~d~~~g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~--------- 241 (582)
T 3o4h_A 173 GRVSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFS--------- 241 (582)
T ss_dssp TEEEEEEEETTTCC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHH---------
T ss_pred CCeEEEEEcCCCCC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChh---------
Confidence 789999998887 446677888899999999999999888888 8999999998877 5554432100
Q ss_pred ccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEE
Q 038577 575 AANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLL 616 (860)
Q Consensus 575 ~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~ 616 (860)
..........+|||||.++++++.++.+++|++ |+..
T Consensus 242 ---~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 242 ---SYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp ---HHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred ---hhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 000112345559999999999999999999999 6543
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.87 E-value=3.8e-20 Score=196.59 Aligned_cols=295 Identities=12% Similarity=0.033 Sum_probs=203.1
Q ss_pred EEEECCCCcEEeeccCCccCeeE-----EEEcCCCCEEEEEcC-CC--cEEEEEcccCeEEEEeec-CCceeEEEECCCC
Q 038577 35 SVTDLIKSKTVTLPVESSSNICR-----IAVSPDGTFLLTVDE-NQ--RCHFINLHCHVVLHRVRF-KYPVNAILFSPNG 105 (860)
Q Consensus 35 ~v~d~~~~~~~~~~~~h~~~v~~-----va~spdg~~la~~~~-d~--~i~vwd~~~~~~~~~~~~-~~~v~~~~fspdg 105 (860)
..+|..++.....+..|...... .+|||||++||+++. ++ .|.+||+.+++....... ...+..++|||||
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 34578888877777677665555 899999999999887 56 488899999988776663 3344578999999
Q ss_pred CEEEEEe-CCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEE--EcCCCCeEEEe----------------------e
Q 038577 106 KYIAVGT-GKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALN--WSPDSNYLLVG----------------------S 160 (860)
Q Consensus 106 ~~la~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~s~d~~~l~s~----------------------~ 160 (860)
+.|+++. ++.|++||+.+++. ......+...+.... ++||+++++.. .
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~-------~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEE-------NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCE-------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred CEEEEEeCCCeEEEEECCCCcc-------eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 9999984 67999999998873 333444555554443 48999988743 2
Q ss_pred cCCeEEEEeecccccCcccccceEeecCCCcEEEEEEcc-CCCCCccceEEEEcCC------ccEEEeeecCCCCCCccc
Q 038577 161 KDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSV-DKKTDKVNRIYTIARD------CYMFSWGFSGNDGKIDET 233 (860)
Q Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~~~~~~l~s~~~d------g~i~~w~~~~~~~~~~~~ 233 (860)
.+..|.+||+.++ ....+..+...+..+.|+| |++ .|+.+..+ ..|.+++..++..
T Consensus 166 ~~~~l~~~d~~~g-------~~~~l~~~~~~~~~~~~sp~dg~-----~l~~~~~~~~~~~~~~l~~~d~~~~~~----- 228 (388)
T 3pe7_A 166 PCCRLMRVDLKTG-------ESTVILQENQWLGHPIYRPYDDS-----TVAFCHEGPHDLVDARMWLINEDGTNM----- 228 (388)
T ss_dssp CCEEEEEEETTTC-------CEEEEEEESSCEEEEEEETTEEE-----EEEEEECSCTTTSSCSEEEEETTSCCC-----
T ss_pred CcceEEEEECCCC-------ceEEeecCCccccccEECCCCCC-----EEEEEEecCCCCCcceEEEEeCCCCce-----
Confidence 3467999998876 3445556777899999999 998 88777653 2677776655321
Q ss_pred cCCCCCCCCCCCcceeeeEEeeeeccccCCC--CceEEEEecCCCCEEEEEEc-CC----eEEEEECCCceeEEEEeecC
Q 038577 234 MEDSEPPSPGTPERRVKKWGLLRKDDFSQAP--SKVTACDYHRGLDMVVVGFS-NG----VFGLYQMPDFVCIHLLSISR 306 (860)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-~g----~i~~~~~~~~~~~~~~~~~~ 306 (860)
..+..+. ..+....|+|+|+.|+..+. ++ .|++||+.+++.........
T Consensus 229 ------------------------~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~ 284 (388)
T 3pe7_A 229 ------------------------RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA 284 (388)
T ss_dssp ------------------------EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECC
T ss_pred ------------------------EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCC
Confidence 1111122 24778899999998865443 22 39999998887543322221
Q ss_pred c-----eeEEEEEeeCCCEEEEEE--------ccCCcEEEEEccCceEEEEecCccc-----------CeEEEEEcCCCC
Q 038577 307 E-----KITTAVFNELGNWLVFGC--------AKLGQLLVWEWRSESYILKQQGHYF-----------DVNCLAYSPDSQ 362 (860)
Q Consensus 307 ~-----~i~~~~~s~~~~~l~~~~--------~~~g~i~v~d~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~ 362 (860)
. .....+|+|||+.+++.. ..+..|++||+.+++.. .+..+.. .+.+++|+|||+
T Consensus 285 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~ 363 (388)
T 3pe7_A 285 CSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDK 363 (388)
T ss_dssp EEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred ceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCC
Confidence 0 012237999999998764 33478999999987654 3434444 478889999999
Q ss_pred EEEEEeC-CCcEEEEEC
Q 038577 363 LLATGAD-DNKVKVWTV 378 (860)
Q Consensus 363 ~l~~~~~-dg~i~iwd~ 378 (860)
.|+..+. +|...+|.+
T Consensus 364 ~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 364 QILFTSDVHGKPALYLA 380 (388)
T ss_dssp EEEEEECTTSSCEEEEE
T ss_pred EEEEEecCCCceeEEEE
Confidence 8887664 666666654
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=3.5e-20 Score=196.88 Aligned_cols=307 Identities=10% Similarity=0.007 Sum_probs=208.7
Q ss_pred EECCCceeEEEEeecCceeEE-----EEEeeCCCEEEEEEccCC--cEEEEEccCceEEEEecCcccCeEEEEEcCCCCE
Q 038577 291 YQMPDFVCIHLLSISREKITT-----AVFNELGNWLVFGCAKLG--QLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQL 363 (860)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~i~~-----~~~s~~~~~l~~~~~~~g--~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 363 (860)
++..++.....+..+...... .+|+|||+++++++..+| .|.+||+.+++......++...+..++|+|||+.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 455566677777666555554 789999999999987556 4888899998877666666666657789999999
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEE--EeeCCCEEEEEe----------------------CCCcEEEEE
Q 038577 364 LATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALH--FMANNHSLLSAS----------------------LDGTVRAWD 419 (860)
Q Consensus 364 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~--~~~~~~~l~s~~----------------------~dg~i~~wd 419 (860)
|+.++.++.|++||+.+++.......+...+.... ++++++.++... .+..|.+||
T Consensus 95 l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 174 (388)
T 3pe7_A 95 LFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174 (388)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEE
Confidence 99999999999999999988777766666554444 488998887432 346799999
Q ss_pred ccccceeeEeeCCCCCcEEEEEECC-CCCEEEEEecC-----CCeEEEEECCCCceEEEecCcc-cCeEEEEEcCCCCEE
Q 038577 420 LFRYRNFRTFTTPSSRQFVSLASDQ-SGEVICAGTLD-----SFEIFVWSMKTGRLLDILSGHE-GPVHGLVFSPTNATL 492 (860)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~-----~~~i~v~d~~~~~~~~~~~~h~-~~v~~l~~s~~~~~l 492 (860)
+.+++....... ...+..+.++| +|+.|+....+ ...|+++|..+++.......+. ..+..++|+|||+.|
T Consensus 175 ~~~g~~~~l~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 175 LKTGESTVILQE--NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp TTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred CCCCceEEeecC--CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEE
Confidence 988865544432 33578899999 99998877653 2278999987665544333222 357889999999987
Q ss_pred EEEeCC-C----cEEEEEccCCcceeEEcccCC------CeEEEEEeeCCCEEEEE---------eCCCeEEEEeCCCCc
Q 038577 493 ASSSWD-K----TVRLWNVFEGKGSVESFPHTH------DVLTVVYRPDGRQLACS---------TLDGQIHFWDPLNGE 552 (860)
Q Consensus 493 ~s~~~d-g----~i~iwd~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~---------~~dg~i~iwd~~~~~ 552 (860)
+..+.+ + .|++||+.+++... +..... ....++|+|||+.|+.. ..+..|++||+.+++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQ-LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEE-EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred EEEecCCCCCcceEEEEecCCCceEE-EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 665432 2 39999999887322 111111 01123799999988864 446689999999877
Q ss_pred eeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec-CCCeEEEEEC
Q 038577 553 LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG-SSKYICMYDV 610 (860)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~-~dg~v~vwd~ 610 (860)
.. .+..+..... .........+.+++|||||++|+..+ .+|...+|.+
T Consensus 332 ~~-~l~~~~~~~~---------~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 332 QH-RVARHDTSWK---------VFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EE-EEEECCCCCC---------CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred eE-EeccccCccc---------ccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 53 3333321000 00000001257789999999888665 4666666644
No 163
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.85 E-value=1.4e-18 Score=180.55 Aligned_cols=302 Identities=13% Similarity=0.116 Sum_probs=212.7
Q ss_pred CCCEEEeee-------CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcC----------CCcEEEEEcccC
Q 038577 22 QNTKLISPV-------GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDE----------NQRCHFINLHCH 84 (860)
Q Consensus 22 dg~~l~~~~-------~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~----------d~~i~vwd~~~~ 84 (860)
|++++++.. ++.|.+||..+++....+..+..+ .++|||||++|+++.. ++.|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 667766643 468999999999987666555444 9999999999998862 567999999999
Q ss_pred eEEEEeec-------CCceeEEEECCCCCEEEEEe---CCeEEEEeCCCCCcccceeEEEEE-eeccCCCeEEEEEcCCC
Q 038577 85 VVLHRVRF-------KYPVNAILFSPNGKYIAVGT---GKLVQIWRSPGFKKEVFAFELIRT-LADCNDKVTALNWSPDS 153 (860)
Q Consensus 85 ~~~~~~~~-------~~~v~~~~fspdg~~la~~~---~~~i~iwd~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~s~d~ 153 (860)
+.+..+.. ......++|+|||++|+++. ++.|.+||+.+++ .+.. +. +. ....+.+.|++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~-------~~~~~i~-~~-~~~~v~~~p~~ 162 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD-------YVEDVTA-AA-GCWSVIPQPNR 162 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE-------EEEEEGG-GT-TEEEEEECTTS
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc-------EEEEEec-CC-CcceeEEcCCC
Confidence 99988862 24578899999999999882 5799999999875 3444 33 22 22336677876
Q ss_pred -CeEEEeecCCeEEEEeecccccCccccc-ceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCc
Q 038577 154 -NYLLVGSKDLAVRLFYVKEKLKGIHTNK-PFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKID 231 (860)
Q Consensus 154 -~~l~s~~~dg~v~vwd~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~ 231 (860)
..+++.+.||.+.+|+.....+...... ...+..+..++ .+.+++++. .++..+.++.+.++|+......
T Consensus 163 ~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~-----~~~~~~~~~~v~v~d~~~~~~~-- 234 (361)
T 2oiz_A 163 PRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKD-----KAHFVSYYGNVYSADFSGDEVK-- 234 (361)
T ss_dssp SSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSS-----EEEEEBTTSEEEEEECSSSSCE--
T ss_pred CeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCC-----EEEEEeCCCeEEEEEecCCCce--
Confidence 6778888999999999865311100000 01112222222 333466776 6777788899999998754320
Q ss_pred cccCCCCCCCCCCCcceeeeEEeeeec--cccCCCCceEEEEecCCCCEEEEEEc-----------CCeEEEEECCCcee
Q 038577 232 ETMEDSEPPSPGTPERRVKKWGLLRKD--DFSQAPSKVTACDYHRGLDMVVVGFS-----------NGVFGLYQMPDFVC 298 (860)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-----------~g~i~~~~~~~~~~ 298 (860)
....|.+.... ...........++++|+++.++++.. .+.|.+||+.+++.
T Consensus 235 ----------------~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~ 298 (361)
T 2oiz_A 235 ----------------VDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR 298 (361)
T ss_dssp ----------------EEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE
T ss_pred ----------------ecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE
Confidence 01122211100 00000111123688999998887754 35899999999999
Q ss_pred EEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc--eEEEEecCcccCeEEEEEcCCCC
Q 038577 299 IHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE--SYILKQQGHYFDVNCLAYSPDSQ 362 (860)
Q Consensus 299 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~--~~~~~~~~~~~~v~~~~~s~~~~ 362 (860)
+..+..+. +..++|+|||+++++++ . +.|.+||..++ +.+..+..+......++++|+|.
T Consensus 299 v~~i~~~~--p~~ia~spdg~~l~v~n-~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 299 VARIPGRD--ALSMTIDQQRNLMLTLD-G-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECTT--CCEEEEETTTTEEEEEC-S-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEEecCC--eeEEEECCCCCEEEEeC-C-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99998887 99999999999888766 4 99999999999 98888766777788999999985
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=1.2e-18 Score=182.51 Aligned_cols=264 Identities=10% Similarity=0.070 Sum_probs=184.2
Q ss_pred CcEEEEEc--cCceEEEE--ec-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCeeEEEeecC-CCceEEEEEee
Q 038577 329 GQLLVWEW--RSESYILK--QQ-GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS-SGFCFVTFTEH-TNAVTALHFMA 401 (860)
Q Consensus 329 g~i~v~d~--~~~~~~~~--~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~-~~~v~~i~~~~ 401 (860)
+.|.+|++ .+++.... .. .....+..++|+|+|++|++++.+ .|.+|++. +++........ .+.+.+++|+|
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp 92 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT 92 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC
Confidence 45776654 45544322 11 233467889999999999998887 99999997 77665433211 13356689999
Q ss_pred CCCE--EEEEe-------------CCCcEEEEEcc-ccceeeEeeC---CCCCcEEEEEECCCCCEEEEEecCCCeEEEE
Q 038577 402 NNHS--LLSAS-------------LDGTVRAWDLF-RYRNFRTFTT---PSSRQFVSLASDQSGEVICAGTLDSFEIFVW 462 (860)
Q Consensus 402 ~~~~--l~s~~-------------~dg~i~~wd~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~ 462 (860)
+|++ ++++. .++.+.+|++. +++....+.. .....+.+++++|+|++++++......|++|
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 9984 44543 68999999997 4554433331 2345688999999999998877644499999
Q ss_pred ECC-CCceE--EEec--CcccCeEEEEEcCCCCEEEEEeC-CCcEEEEEcc--CCccee---EEc--c-----cCC----
Q 038577 463 SMK-TGRLL--DILS--GHEGPVHGLVFSPTNATLASSSW-DKTVRLWNVF--EGKGSV---ESF--P-----HTH---- 520 (860)
Q Consensus 463 d~~-~~~~~--~~~~--~h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~--~~~~~~---~~~--~-----~~~---- 520 (860)
|+. +++.. ..+. .|...+..++|+|||+++++++. ++.|.+|++. +++... ... . +..
T Consensus 173 ~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 173 RKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp EECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred EECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccc
Confidence 998 77653 2333 24567899999999999988775 6899999875 344221 111 1 111
Q ss_pred --CeEEEE-EeeCCCEEEEEeCCC------eEEEEeCC-CCceeEE---EecccccCCCccccccccccccCCCCcEEEE
Q 038577 521 --DVLTVV-YRPDGRQLACSTLDG------QIHFWDPL-NGELMYT---IEGRRDISGGRLMTDRRSAANSSSGKCFTTL 587 (860)
Q Consensus 521 --~v~~~~-~s~~~~~l~~~~~dg------~i~iwd~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 587 (860)
.+..++ |+|||++|++++.+. .|.+|++. +++.... ...+. ..+..+
T Consensus 253 ~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~--------------------~~~~~~ 312 (365)
T 1jof_A 253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT--------------------SGGHSN 312 (365)
T ss_dssp BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS--------------------CCTTCC
T ss_pred ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCC--------------------CCcccc
Confidence 488999 999999988776432 89999986 5664432 22111 124678
Q ss_pred EEec---CCCEEEEecCC-CeEEEEECCCc
Q 038577 588 CYSA---DGSYILAGGSS-KYICMYDVADQ 613 (860)
Q Consensus 588 ~~s~---~g~~l~~~~~d-g~v~vwd~~~~ 613 (860)
+|+| ||++|++++.+ +.|.+|+++..
T Consensus 313 a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 313 AVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9999 89999998864 89999999876
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=4.4e-18 Score=178.20 Aligned_cols=274 Identities=7% Similarity=0.004 Sum_probs=186.6
Q ss_pred CeEEEEE--CCCCcEEeecc---CCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcc-cCeEEEEeec--CCceeEEEECC
Q 038577 32 NRVSVTD--LIKSKTVTLPV---ESSSNICRIAVSPDGTFLLTVDENQRCHFINLH-CHVVLHRVRF--KYPVNAILFSP 103 (860)
Q Consensus 32 ~~i~v~d--~~~~~~~~~~~---~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~-~~~~~~~~~~--~~~v~~~~fsp 103 (860)
+.|.+|+ ..+++...... ++...+..++|+|||++|++++.+ .|.+|++. +++......+ .+...+++|+|
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp 92 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT 92 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC
Confidence 4577665 56776543321 344578999999999999988887 99999997 7877654442 24467799999
Q ss_pred CCCE--EEEE--------------eCCeEEEEeCCC-CCcccceeEEEEEee-ccCCCeEEEEEcCCCCeEEEeec-CCe
Q 038577 104 NGKY--IAVG--------------TGKLVQIWRSPG-FKKEVFAFELIRTLA-DCNDKVTALNWSPDSNYLLVGSK-DLA 164 (860)
Q Consensus 104 dg~~--la~~--------------~~~~i~iwd~~~-~~~~~~~~~~~~~~~-~h~~~v~~l~~s~d~~~l~s~~~-dg~ 164 (860)
||++ ++++ .++.+.+|++.. ++.. ..+..+. .+...+.+++|+|||++|+++.. ++.
T Consensus 93 dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~ 168 (365)
T 1jof_A 93 NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLE----KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANK 168 (365)
T ss_dssp CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEE----EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCc----ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCE
Confidence 9994 4443 478899999974 4310 0111111 24567999999999998887654 679
Q ss_pred EEEEeec-ccccCcccccceEee--cCCCcEEEEEEccCCCCCccceEEEEcC-CccEEEeeecCCCCCCccccCCCCCC
Q 038577 165 VRLFYVK-EKLKGIHTNKPFLLL--GHRDSVVGCFFSVDKKTDKVNRIYTIAR-DCYMFSWGFSGNDGKIDETMEDSEPP 240 (860)
Q Consensus 165 v~vwd~~-~~~~~~~~~~~~~~~--~h~~~i~~~~~~~~~~~~~~~~l~s~~~-dg~i~~w~~~~~~~~~~~~~~~~~~~ 240 (860)
|++|+++ ++ +. .....+. .|...+..++|+|+++ ++++++. ++.+.+|+++.....
T Consensus 169 v~~~~~~~~g-~~---~~~~~~~~~~~g~~p~~~~~spdg~-----~l~v~~~~~~~v~v~~~~~~~g~----------- 228 (365)
T 1jof_A 169 LWTHRKLASG-EV---ELVGSVDAPDPGDHPRWVAMHPTGN-----YLYALMEAGNRICEYVIDPATHM----------- 228 (365)
T ss_dssp EEEEEECTTS-CE---EEEEEEECSSTTCCEEEEEECTTSS-----EEEEEETTTTEEEEEEECTTTCC-----------
T ss_pred EEEEEECCCC-CE---EEeeeEecCCCCCCCCEeEECCCCC-----EEEEEECCCCeEEEEEEeCCCCc-----------
Confidence 9999998 55 11 1112232 2467799999999998 8887765 689999987642110
Q ss_pred CCCCCcceeeeEEeeeecccc----CCCC------ceEEEE-ecCCCCEEEEEEcCC------eEEEEECC-CceeEEE-
Q 038577 241 SPGTPERRVKKWGLLRKDDFS----QAPS------KVTACD-YHRGLDMVVVGFSNG------VFGLYQMP-DFVCIHL- 301 (860)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~----~~~~------~v~~~~-~~~~~~~l~~~~~~g------~i~~~~~~-~~~~~~~- 301 (860)
. .........+. ++.. .+..++ |+|+|++|+++..+. .|.+|++. +++....
T Consensus 229 --------~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~ 299 (365)
T 1jof_A 229 --------P-VYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQL 299 (365)
T ss_dssp --------E-EEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEE
T ss_pred --------E-EEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEee
Confidence 0 00000011111 1122 588999 999999988776543 89999986 5554432
Q ss_pred --EeecCceeEEEEEee---CCCEEEEEEccCCcEEEEEccCc
Q 038577 302 --LSISREKITTAVFNE---LGNWLVFGCAKLGQLLVWEWRSE 339 (860)
Q Consensus 302 --~~~~~~~i~~~~~s~---~~~~l~~~~~~~g~i~v~d~~~~ 339 (860)
...+...+..++|+| ||++++++..+++.|.+|++...
T Consensus 300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 300 FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 333444577899999 89999999877799999998766
No 166
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=1.3e-18 Score=185.33 Aligned_cols=266 Identities=14% Similarity=0.137 Sum_probs=186.1
Q ss_pred eCCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccC-----------eE-----EEEeecC
Q 038577 30 VGNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCH-----------VV-----LHRVRFK 93 (860)
Q Consensus 30 ~~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~-----------~~-----~~~~~~~ 93 (860)
..+.+++|+.... .....+..+++++++.++++++.++ +++|+.... .. ...+.+.
T Consensus 21 ~~~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (434)
T 2oit_A 21 ALKKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK 92 (434)
T ss_dssp ECCEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS
T ss_pred eeeeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC
Confidence 3466777764311 1334689999999999999998887 888875421 11 1233466
Q ss_pred CceeEEEECCCCCEEEE----E-eCCeEEEEeCCCCC----cccceeEEEEEeeccCCCeEEEEEcCC-CCeEEEeecCC
Q 038577 94 YPVNAILFSPNGKYIAV----G-TGKLVQIWRSPGFK----KEVFAFELIRTLADCNDKVTALNWSPD-SNYLLVGSKDL 163 (860)
Q Consensus 94 ~~v~~~~fspdg~~la~----~-~~~~i~iwd~~~~~----~~~~~~~~~~~~~~h~~~v~~l~~s~d-~~~l~s~~~dg 163 (860)
..|.+++|+|+|++||+ + .|+.|+|||+.++. ....+......+.+|.+.|.+++|+|+ +.+|++++.||
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 78999999999999994 4 58999999987541 011122335667789999999999998 78999999999
Q ss_pred eEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCC
Q 038577 164 AVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPG 243 (860)
Q Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~ 243 (860)
+|++||+.++ .......+|...|.+++|+|+++ +|++++.||.|++||.+. ..
T Consensus 173 ~v~iwD~~~~------~~~~~~~~~~~~v~~v~wspdg~-----~lasgs~dg~v~iwd~~~-~~--------------- 225 (434)
T 2oit_A 173 SIAVLQVTET------VKVCATLPSTVAVTSVCWSPKGK-----QLAVGKQNGTVVQYLPTL-QE--------------- 225 (434)
T ss_dssp CEEEEEESSS------EEEEEEECGGGCEEEEEECTTSS-----CEEEEETTSCEEEECTTC-CE---------------
T ss_pred eEEEEEcCCC------cceeeccCCCCceeEEEEcCCCC-----EEEEEcCCCcEEEEccCC-cc---------------
Confidence 9999999887 44556677999999999999999 999999999999999872 11
Q ss_pred CCcceeeeEEeeeeccc-cCCCCceEEEEecCCCCEEEEE-EcCC------eEEEEECCCce-----eEEEEe-------
Q 038577 244 TPERRVKKWGLLRKDDF-SQAPSKVTACDYHRGLDMVVVG-FSNG------VFGLYQMPDFV-----CIHLLS------- 303 (860)
Q Consensus 244 ~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~~~g------~i~~~~~~~~~-----~~~~~~------- 303 (860)
.-.+...... ..+...+.+++|++++.++++. ..+| .+++|++...+ ....+.
T Consensus 226 -------~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~ 298 (434)
T 2oit_A 226 -------KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSC 298 (434)
T ss_dssp -------EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCC
T ss_pred -------cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCC
Confidence 0000000001 1233479999999988777543 3333 38899987542 111111
Q ss_pred ecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc
Q 038577 304 ISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 304 ~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~ 337 (860)
....+...+..-++.+.+++++...+.|.+....
T Consensus 299 ~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 299 TERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp SSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 1122223344448888888888877777777654
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=7.2e-18 Score=175.21 Aligned_cols=298 Identities=11% Similarity=0.082 Sum_probs=211.9
Q ss_pred CCCCEEEEEc------CCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEe-----------CCeEEEEeCCCC
Q 038577 62 PDGTFLLTVD------ENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGT-----------GKLVQIWRSPGF 124 (860)
Q Consensus 62 pdg~~la~~~------~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~-----------~~~i~iwd~~~~ 124 (860)
|+++++.+.. .|+.|.+||..+++.+..+.....- .++|+|||++++++. ++.|.+||..+.
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 4667766653 3679999999999998888743333 999999999999883 467999999877
Q ss_pred CcccceeEEEEEeecc------CCCeEEEEEcCCCCeEEEeec--CCeEEEEeecccccCcccccceE-eecCCCcEEEE
Q 038577 125 KKEVFAFELIRTLADC------NDKVTALNWSPDSNYLLVGSK--DLAVRLFYVKEKLKGIHTNKPFL-LLGHRDSVVGC 195 (860)
Q Consensus 125 ~~~~~~~~~~~~~~~h------~~~v~~l~~s~d~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~-~~~h~~~i~~~ 195 (860)
+ .+..+... ......++|+|||++|+++.. ++.|.+||+.+. ..... +. +.+ ...+
T Consensus 92 ~-------~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~------~~~~~~i~-~~~-~~~v 156 (361)
T 2oiz_A 92 T-------FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKG------DYVEDVTA-AAG-CWSV 156 (361)
T ss_dssp C-------EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTT------EEEEEEGG-GTT-EEEE
T ss_pred c-------EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCC------cEEEEEec-CCC-ccee
Confidence 6 34444422 245678999999999998864 579999999887 33333 22 222 2335
Q ss_pred EEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCC
Q 038577 196 FFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRG 275 (860)
Q Consensus 196 ~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 275 (860)
.+.|++.. .+++.+.||.+.+|+....... .........+.....+ ..+.++|+
T Consensus 157 ~~~p~~~~----~~~~~~~dg~~~~v~~~~~g~~---------------------~~~~~~~~~~~~~~~~-~~~~~~~~ 210 (361)
T 2oiz_A 157 IPQPNRPR----SFMTICGDGGLLTINLGEDGKV---------------------ASQSRSKQMFSVKDDP-IFIAPALD 210 (361)
T ss_dssp EECTTSSS----EEEEEETTSSEEEEEECTTSSE---------------------EEEEECCCCSCTTTSC-BCSCCEEC
T ss_pred EEcCCCCe----eEEEECCCCcEEEEEECCCCcE---------------------eeeccccceEcCCCCc-eEEEeccc
Confidence 67777632 7888999999999988652110 0000000111111111 12334677
Q ss_pred CCEEEEEEcCCeEEEEECCCceeE--EEEeecC----------ceeEEEEEeeCCCEEEEEEc-c---------CCcEEE
Q 038577 276 LDMVVVGFSNGVFGLYQMPDFVCI--HLLSISR----------EKITTAVFNELGNWLVFGCA-K---------LGQLLV 333 (860)
Q Consensus 276 ~~~l~~~~~~g~i~~~~~~~~~~~--~~~~~~~----------~~i~~~~~s~~~~~l~~~~~-~---------~g~i~v 333 (860)
+..++..+.++.+.++|+...... ..+.... .....++|+|+++.++++.. + .+.|.+
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~v 290 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWV 290 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEE
Confidence 778888888899999998654322 2221111 11223789999998888764 1 248999
Q ss_pred EEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC--eeEEEeecCCCceEEEEEeeCCC
Q 038577 334 WEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSG--FCFVTFTEHTNAVTALHFMANNH 404 (860)
Q Consensus 334 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~i~~~~~~~ 404 (860)
||..+++.+..+..+. +.+++|+|+|++|++++. +.|.+||..++ +.+..+..+......++++|+|+
T Consensus 291 iD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 291 MDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 9999999999988776 899999999999998887 99999999999 99988877888899999999985
No 168
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.83 E-value=4.6e-17 Score=177.27 Aligned_cols=334 Identities=13% Similarity=0.062 Sum_probs=241.0
Q ss_pred CCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc--CceEEEEecCcccC
Q 038577 274 RGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR--SESYILKQQGHYFD 351 (860)
Q Consensus 274 ~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~--~~~~~~~~~~~~~~ 351 (860)
|.+..+++...++.|.++|..+++.+..+.... .+..+.|+|||+++++++. ++.|.+||+. +++.+.++.... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v~~i~~G~-~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTVAEIKIGS-E 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEEEEEECCS-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEeEEEecCC-C
Confidence 444556667778999999999999998887654 4568999999999998875 5999999995 777777765433 3
Q ss_pred eEEEEEc----CCCCEEEEEeC-CCcEEEEECCCCeeEEEeecC-----------CCceEEEEEeeCCCE-EEEEeCCCc
Q 038577 352 VNCLAYS----PDSQLLATGAD-DNKVKVWTVSSGFCFVTFTEH-----------TNAVTALHFMANNHS-LLSASLDGT 414 (860)
Q Consensus 352 v~~~~~s----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~i~~~~~~~~-l~s~~~dg~ 414 (860)
...++|+ |||++++++.. ++.|.++|..+.+.+..+... ...+..+..++++.. ++....+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6789999 69998887765 589999999999888876521 126788888887654 455566799
Q ss_pred EEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC-----cccCeEEEEEcCCC
Q 038577 415 VRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG-----HEGPVHGLVFSPTN 489 (860)
Q Consensus 415 i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~-----h~~~v~~l~~s~~~ 489 (860)
|.++|..+.+.......+.......+.|+|+|++++++....+.|.++|+.+++.+..+.. |.+.-..+ ++|++
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~ 400 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTF 400 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTT
T ss_pred EEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCC
Confidence 9999987765444333334446678899999999988887656999999999998876653 33222222 68875
Q ss_pred CEE-EEEe-CCCcEEEEEccC-------CcceeEEcccCCCeEEEEEeeCCCEEEEEeC-------CCeEEEEeCCCC--
Q 038577 490 ATL-ASSS-WDKTVRLWNVFE-------GKGSVESFPHTHDVLTVVYRPDGRQLACSTL-------DGQIHFWDPLNG-- 551 (860)
Q Consensus 490 ~~l-~s~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~-- 551 (860)
..+ +++. .++.|.++|..+ .+.+..+......-..+..+|++++|.+... .+.|.++|+.+.
T Consensus 401 g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 480 (567)
T 1qks_A 401 GPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTG 480 (567)
T ss_dssp EEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred CcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccc
Confidence 544 4443 468999999987 4444444433333355778999999998763 358999999876
Q ss_pred ---cee-EEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec-----CCCeEEEEECCCceEEEEEeec
Q 038577 552 ---ELM-YTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG-----SSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 552 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~-----~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
... ..+.... .......++.+..+.|+|+|+++..+. .++.|.|+|..++++++.++..
T Consensus 481 ~g~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 548 (567)
T 1qks_A 481 DGSDPEFKTLPIAE------------WAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDE 548 (567)
T ss_dssp SSSCCCEEEECHHH------------HHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred cccCCCcEEecccc------------ccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCCC
Confidence 211 2222110 000111235689999999999887663 3799999999999999887744
Q ss_pred c
Q 038577 623 H 623 (860)
Q Consensus 623 ~ 623 (860)
.
T Consensus 549 ~ 549 (567)
T 1qks_A 549 R 549 (567)
T ss_dssp T
T ss_pred c
Confidence 3
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=1.7e-18 Score=184.59 Aligned_cols=299 Identities=9% Similarity=0.001 Sum_probs=199.2
Q ss_pred EEEECCCCcEEeeccCCccC-----eeEEEEcCCCCEEEEEcCC---CcEEEEEcccCeEEEEeecCCcee-EEEECCCC
Q 038577 35 SVTDLIKSKTVTLPVESSSN-----ICRIAVSPDGTFLLTVDEN---QRCHFINLHCHVVLHRVRFKYPVN-AILFSPNG 105 (860)
Q Consensus 35 ~v~d~~~~~~~~~~~~h~~~-----v~~va~spdg~~la~~~~d---~~i~vwd~~~~~~~~~~~~~~~v~-~~~fspdg 105 (860)
...|..+++....+..+... +.+++|||||++||++... ..|.+||+.+++......+..... .+.|||||
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC
Confidence 45588888776555444433 7889999999999887543 478889999888765544444433 48999999
Q ss_pred CEEEEE-eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEE-------------------EEEcCCCCeEEEe-----e
Q 038577 106 KYIAVG-TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTA-------------------LNWSPDSNYLLVG-----S 160 (860)
Q Consensus 106 ~~la~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~-------------------l~~s~d~~~l~s~-----~ 160 (860)
++|+++ .++.|++||+.+++. ......+...... +.|+|+++.++.. .
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~-------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~ 165 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEE-------QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTN 165 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCE-------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTC
T ss_pred CEEEEEEcCCcEEEEECCCCCc-------EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCC
Confidence 999888 566899999988762 2223333332222 3568888877654 3
Q ss_pred cCCeEEEEeecccccCcccccceEeecCCCcEEEEEEcc-CCCCCccceEEEEcCC------ccEEEeeecCCCCCCccc
Q 038577 161 KDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSV-DKKTDKVNRIYTIARD------CYMFSWGFSGNDGKIDET 233 (860)
Q Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~-~~~~~~~~~l~s~~~d------g~i~~w~~~~~~~~~~~~ 233 (860)
.+..|.+||+.++ . ...+..+...+..+.|+| ++. .|+..+.+ ..|.+|++.++..
T Consensus 166 ~~~~l~~~d~~~g------~-~~~~~~~~~~~~~~~~sp~dg~-----~l~~~~~~~~~~~~~~l~~~d~~~~~~----- 228 (396)
T 3c5m_A 166 PTCRLIKVDIETG------E-LEVIHQDTAWLGHPIYRPFDDS-----TVGFCHEGPHDLVDARMWLVNEDGSNV----- 228 (396)
T ss_dssp CCEEEEEEETTTC------C-EEEEEEESSCEEEEEEETTEEE-----EEEEEECSCSSSCSCCCEEEETTSCCC-----
T ss_pred CcceEEEEECCCC------c-EEeeccCCcccccceECCCCCC-----EEEEEecCCCCCCCceEEEEECCCCce-----
Confidence 5678999998876 2 233445677889999999 777 67766544 3577777654321
Q ss_pred cCCCCCCCCCCCcceeeeEEeeeeccccCC-CCceEEEEecCCCCEEEEEEcC-----CeEEEEECCCceeEEEEeecCc
Q 038577 234 MEDSEPPSPGTPERRVKKWGLLRKDDFSQA-PSKVTACDYHRGLDMVVVGFSN-----GVFGLYQMPDFVCIHLLSISRE 307 (860)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~-----g~i~~~~~~~~~~~~~~~~~~~ 307 (860)
....... ...+..+.|+|+|+.|+.++.+ +.|++||+.+++.........
T Consensus 229 -----------------------~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~- 284 (396)
T 3c5m_A 229 -----------------------RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP- 284 (396)
T ss_dssp -----------------------EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-
T ss_pred -----------------------eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-
Confidence 0111111 2357789999999988877554 459999998876544332222
Q ss_pred eeEEEEEee-CCCEEEEEEc---------------cCCcEEEEEccCceEEEEecCccc-----------CeEEEEEcCC
Q 038577 308 KITTAVFNE-LGNWLVFGCA---------------KLGQLLVWEWRSESYILKQQGHYF-----------DVNCLAYSPD 360 (860)
Q Consensus 308 ~i~~~~~s~-~~~~l~~~~~---------------~~g~i~v~d~~~~~~~~~~~~~~~-----------~v~~~~~s~~ 360 (860)
.. +.|+| +|+.++++.. .++.|++||+.++.... +..+.. .+..++|+|+
T Consensus 285 -~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~s~d 361 (396)
T 3c5m_A 285 -CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK-LCKHSTSWDVLDGDRQITHPHPSFTPN 361 (396)
T ss_dssp -EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE-EEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred -CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE-ccCCCCccccccccccCCCCCceEccC
Confidence 23 89999 9998887542 23789999998876432 333333 2566789999
Q ss_pred CCEEEEEeC-CCc--EEEEECCCCeeE
Q 038577 361 SQLLATGAD-DNK--VKVWTVSSGFCF 384 (860)
Q Consensus 361 ~~~l~~~~~-dg~--i~iwd~~~~~~~ 384 (860)
|+.|+.++. ++. |..+++.++...
T Consensus 362 g~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 362 DDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp SSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred CCeEEEEecCCCCceEEEEEEcccccc
Confidence 998887765 444 444455555443
No 170
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=4.5e-19 Score=188.98 Aligned_cols=310 Identities=8% Similarity=-0.033 Sum_probs=202.3
Q ss_pred EEECCCceeEEEEeecCce-----eEEEEEeeCCCEEEEEEccC--CcEEEEEccCceEEEEecCcccCeEEEEEcCCCC
Q 038577 290 LYQMPDFVCIHLLSISREK-----ITTAVFNELGNWLVFGCAKL--GQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQ 362 (860)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~-----i~~~~~s~~~~~l~~~~~~~--g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~ 362 (860)
..|..++..+..+..+... +..++|+|||++++++...+ ..+.+||+.+++.......+......+.|+|||+
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 3455666666666544333 67789999999999887653 3688889988876544333333233478999999
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEE-------------------EEEeeCCCEEEEE-----eCCCcEEEE
Q 038577 363 LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTA-------------------LHFMANNHSLLSA-----SLDGTVRAW 418 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-------------------i~~~~~~~~l~s~-----~~dg~i~~w 418 (860)
.|+.++.++.|++||+.+++.......+...... +.|+|+++.++.+ ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999999988776655544442222 2456666655543 355689999
Q ss_pred EccccceeeEeeCCCCCcEEEEEECC-CCCEEEEEecCC-----CeEEEEECCCCceEEEecCc-ccCeEEEEEcCCCCE
Q 038577 419 DLFRYRNFRTFTTPSSRQFVSLASDQ-SGEVICAGTLDS-----FEIFVWSMKTGRLLDILSGH-EGPVHGLVFSPTNAT 491 (860)
Q Consensus 419 d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~-----~~i~v~d~~~~~~~~~~~~h-~~~v~~l~~s~~~~~ 491 (860)
|+.+++...... ....+..+.++| ++..++....+. ..|++||+.+++........ ...+..++|+|||++
T Consensus 174 d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (396)
T 3c5m_A 174 DIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSA 251 (396)
T ss_dssp ETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSC
T ss_pred ECCCCcEEeecc--CCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCE
Confidence 998877655443 334678899999 788777665432 26999998876654433321 235788999999998
Q ss_pred EEEEeCC-----CcEEEEEccCCcceeEEcccCCCeEEEEEee-CCCEEEEEe----------------CCCeEEEEeCC
Q 038577 492 LASSSWD-----KTVRLWNVFEGKGSVESFPHTHDVLTVVYRP-DGRQLACST----------------LDGQIHFWDPL 549 (860)
Q Consensus 492 l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~----------------~dg~i~iwd~~ 549 (860)
|+.++.+ +.|++||+.+++... +.... ... +.|+| ||+++++++ .++.|++||+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 252 MAYVSYFKGQTDRVIYKANPETLENEE-VMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EEEEEEETTTCCEEEEEECTTTCCEEE-EEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EEEEecCCCCccceEEEEECCCCCeEE-eeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 8777654 449999998876332 22222 233 89999 999888765 34789999998
Q ss_pred CCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecC-CCeEEEE--ECCCce
Q 038577 550 NGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGS-SKYICMY--DVADQV 614 (860)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~-dg~v~vw--d~~~~~ 614 (860)
+++.. .+..+....+. ........+..++|+|||++|+..+. ++...+| ++.+++
T Consensus 329 ~~~~~-~l~~~~~~~~~---------~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 329 AKSAQ-KLCKHSTSWDV---------LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp TTBCC-EEEECCCCCCC---------BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred cCceE-EccCCCCcccc---------ccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 88753 33322210000 00000011456789999998887664 4544444 454443
No 171
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=1.1e-18 Score=185.80 Aligned_cols=220 Identities=15% Similarity=0.169 Sum_probs=166.7
Q ss_pred CcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccce----------ee----EeeCCCCCc
Q 038577 371 NKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRN----------FR----TFTTPSSRQ 436 (860)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~----------~~----~~~~~~~~~ 436 (860)
+.+++|+.... .....+..+++++++.++++++.++ +++|+...... .. ....+....
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 46777764311 1344678899999999999999887 88887643211 00 011223456
Q ss_pred EEEEEECCCCCEEE----EEecCCCeEEEEECCCC--------ce---EEEecCcccCeEEEEEcCC-CCEEEEEeCCCc
Q 038577 437 FVSLASDQSGEVIC----AGTLDSFEIFVWSMKTG--------RL---LDILSGHEGPVHGLVFSPT-NATLASSSWDKT 500 (860)
Q Consensus 437 ~~~~~~~~~~~~l~----~~~~~~~~i~v~d~~~~--------~~---~~~~~~h~~~v~~l~~s~~-~~~l~s~~~dg~ 500 (860)
+.+++|+|+|++|+ +++.|+ .|++||+.++ +. ...+.+|...|.+++|+|+ +.+|++++.||+
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGS-IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEE-EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred ccEEEEcCCCCEEEEEEeccCCCc-eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 99999999999999 455566 9999998765 22 4566789999999999998 889999999999
Q ss_pred EEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCC
Q 038577 501 VRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSS 580 (860)
Q Consensus 501 i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (860)
|++||++++........|...|.+++|+|+|++|++|+.||.|++||++ ++....+..+.... ..+
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~-------------~~~ 239 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYE-------------SDH 239 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCC-------------TTS
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccC-------------CCC
Confidence 9999999886666666788999999999999999999999999999998 66666665443210 011
Q ss_pred CCcEEEEEEecCCCEEEEec-CCC------eEEEEECCCc
Q 038577 581 GKCFTTLCYSADGSYILAGG-SSK------YICMYDVADQ 613 (860)
Q Consensus 581 ~~~i~~l~~s~~g~~l~~~~-~dg------~v~vwd~~~~ 613 (860)
...+.+++|++++.++++.+ .+| .+++|++...
T Consensus 240 ~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 23589999999998886543 333 4899999865
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=6.9e-16 Score=168.00 Aligned_cols=323 Identities=10% Similarity=-0.005 Sum_probs=238.6
Q ss_pred eEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCe
Q 038577 208 RIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGV 287 (860)
Q Consensus 208 ~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~ 287 (860)
.+++...++.|.++|..++.. ...+ .....+..+.++|+|+++++++.++.
T Consensus 169 ~~V~~~~~~~V~viD~~t~~v----------------------~~~i-------~~g~~p~~v~~SpDGr~lyv~~~dg~ 219 (567)
T 1qks_A 169 FSVTLRDAGQIALIDGSTYEI----------------------KTVL-------DTGYAVHISRLSASGRYLFVIGRDGK 219 (567)
T ss_dssp EEEEETTTTEEEEEETTTCCE----------------------EEEE-------ECSSCEEEEEECTTSCEEEEEETTSE
T ss_pred EEEEeCCCCeEEEEECCCCeE----------------------EEEE-------eCCCCccceEECCCCCEEEEEcCCCe
Confidence 677778899999999987532 1111 12235678999999999999999999
Q ss_pred EEEEECC--CceeEEEEeecCceeEEEEEe----eCCCEEEEEEccCCcEEEEEccCceEEEEecCc-----------cc
Q 038577 288 FGLYQMP--DFVCIHLLSISREKITTAVFN----ELGNWLVFGCAKLGQLLVWEWRSESYILKQQGH-----------YF 350 (860)
Q Consensus 288 i~~~~~~--~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~-----------~~ 350 (860)
|.+||+. +++.+..+.... ....++|+ |||++++++....+.+.++|..+.+.+..+... ..
T Consensus 220 V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~ 298 (567)
T 1qks_A 220 VNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP 298 (567)
T ss_dssp EEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCC
T ss_pred EEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCC
Confidence 9999995 777777777654 46799999 699999999998899999999998888776421 12
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeeEEE-eecCCCceEEEEEeeCCCEEEEEe-CCCcEEEEEccccceee
Q 038577 351 DVNCLAYSPDSQLLA-TGADDNKVKVWTVSSGFCFVT-FTEHTNAVTALHFMANNHSLLSAS-LDGTVRAWDLFRYRNFR 427 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~ 427 (860)
.+..+..++++..++ ....+|.|.++|..+...+.. .........++.|+|++++++++. .++.|.++|+.+++...
T Consensus 299 rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 299 RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred ceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 577888898876544 445579999999876543221 123445677899999999887655 67899999999998877
Q ss_pred EeeC-C---CCCcEEEEEECCCCCEEE-EEecCCCeEEEEECCC-------CceEEEecCcccCeEEEEEcCCCCEEEEE
Q 038577 428 TFTT-P---SSRQFVSLASDQSGEVIC-AGTLDSFEIFVWSMKT-------GRLLDILSGHEGPVHGLVFSPTNATLASS 495 (860)
Q Consensus 428 ~~~~-~---~~~~~~~~~~~~~~~~l~-~~~~~~~~i~v~d~~~-------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~ 495 (860)
.+.. . +...-.. .++|++..+. ++....+.|.++|..+ .+.++.+......-..+..+|+++++.+.
T Consensus 379 ~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~ 457 (567)
T 1qks_A 379 IEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVD 457 (567)
T ss_dssp EEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEE
T ss_pred EEeccCcCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEe
Confidence 7765 2 2211222 2678755554 4433334999999988 67888887654444557899999998886
Q ss_pred eC-------CCcEEEEEccCC-----cceeEEc---------ccCCCeEEEEEeeCCCEEEEEe-----CCCeEEEEeCC
Q 038577 496 SW-------DKTVRLWNVFEG-----KGSVESF---------PHTHDVLTVVYRPDGRQLACST-----LDGQIHFWDPL 549 (860)
Q Consensus 496 ~~-------dg~i~iwd~~~~-----~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~iwd~~ 549 (860)
.. .+.|.++|+.+. ....... .....+..+.|+|+|+.+.++. .++.|.|+|..
T Consensus 458 ~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 458 ATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp CTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred cCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 63 358999999877 2221222 1245789999999999887763 37899999999
Q ss_pred CCceeEEEeccc
Q 038577 550 NGELMYTIEGRR 561 (860)
Q Consensus 550 ~~~~~~~~~~~~ 561 (860)
+++++..++...
T Consensus 538 t~~~~~~i~~~~ 549 (567)
T 1qks_A 538 TLELKHVIKDER 549 (567)
T ss_dssp TTEEEEEECCTT
T ss_pred CceEEEEeCCCc
Confidence 999998887643
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.78 E-value=2.5e-16 Score=158.85 Aligned_cols=242 Identities=13% Similarity=0.244 Sum_probs=183.9
Q ss_pred CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeec------CCCceEEEEEe-eCCCEEEEEeC-CCcEEEE
Q 038577 347 GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTE------HTNAVTALHFM-ANNHSLLSASL-DGTVRAW 418 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~v~~i~~~-~~~~~l~s~~~-dg~i~~w 418 (860)
++...+.++++++++.++++...++.|.+||.. +..+..+.. +...+.++++. ++++.+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888889999999987 666665532 34578999995 66665555533 7899999
Q ss_pred EccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec--CcccCeEEEEEcCCCCEEEEEe
Q 038577 419 DLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS--GHEGPVHGLVFSPTNATLASSS 496 (860)
Q Consensus 419 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~~ 496 (860)
| .+++....+.......+..++++++|+++++...++ .|++||.. ++.+..+. ++...+.+++++|+|+++++..
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVM-RVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTT-EEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCC-EEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 9 567777666655555789999999999776666565 99999964 66666654 3556789999999999888877
Q ss_pred CCCcEEEEEccCCcceeEEccc--CCCeEEEEEeeCCCEEEEEeCCC-eEEEEeCCCCceeEEEecccccCCCccccccc
Q 038577 497 WDKTVRLWNVFEGKGSVESFPH--THDVLTVVYRPDGRQLACSTLDG-QIHFWDPLNGELMYTIEGRRDISGGRLMTDRR 573 (860)
Q Consensus 497 ~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (860)
.++.|++||.. ++....+..+ ...+..++++|+|+++++...++ .|.+||. +++.+..+..+..
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~----------- 249 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVK----------- 249 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSC-----------
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCC-----------
Confidence 88999999974 4434444322 36789999999999888887776 9999995 5777776655432
Q ss_pred cccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCc
Q 038577 574 SAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 574 ~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
...+.+++++|+|+++++ +.++.|++|++...
T Consensus 250 -------~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 250 -------HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp -------CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred -------CCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 123789999999987777 56899999998654
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=1.9e-16 Score=165.09 Aligned_cols=264 Identities=12% Similarity=0.125 Sum_probs=180.8
Q ss_pred cEEEeCCCEEEeee----------CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCC---C--cEEEEEc
Q 038577 17 NAVLSQNTKLISPV----------GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDEN---Q--RCHFINL 81 (860)
Q Consensus 17 ~~~~sdg~~l~~~~----------~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d---~--~i~vwd~ 81 (860)
...+ ||+++++.. .+.|.+||+.+++...+ ..+..++|||||++||+++.+ + .|.+||+
T Consensus 19 ~~~~-dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~ 92 (347)
T 2gop_A 19 DPRT-KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADL 92 (347)
T ss_dssp EEEE-ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEET
T ss_pred cceE-CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEEC
Confidence 3455 999998853 35699999999887555 568899999999999987653 2 4888899
Q ss_pred ccCeEEEEeecCCceeEEEECCCCCEEEEEe----------------------------CCeEEEEeCCCCCcccceeEE
Q 038577 82 HCHVVLHRVRFKYPVNAILFSPNGKYIAVGT----------------------------GKLVQIWRSPGFKKEVFAFEL 133 (860)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~fspdg~~la~~~----------------------------~~~i~iwd~~~~~~~~~~~~~ 133 (860)
.+++......... +.+++|+|||+.|+++. ...|++||+.+++.
T Consensus 93 ~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~------- 164 (347)
T 2gop_A 93 ETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV------- 164 (347)
T ss_dssp TTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE-------
T ss_pred CCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-------
Confidence 9888777666555 99999999999999883 25789999987752
Q ss_pred EEEeeccCCCeEEEEEcCCCCeEEEeecCC-------eEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCcc
Q 038577 134 IRTLADCNDKVTALNWSPDSNYLLVGSKDL-------AVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKV 206 (860)
Q Consensus 134 ~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg-------~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~ 206 (860)
...+.. . .+..++|+||| +++++..++ ...+|.++++ ....+..+ ..+..+ +|+|+
T Consensus 165 ~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~-------~~~~l~~~-~~~~~~--spdg~---- 227 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG-------KEEKMFEK-VSFYAV--DSDGE---- 227 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT-------EEEEEEEE-ESEEEE--EECSS----
T ss_pred EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC-------ceEEeccC-cceeeE--CCCCC----
Confidence 133333 3 78899999999 777775542 4566665533 23334444 555544 99998
Q ss_pred ceEEEEcCC--------ccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEE-EEecCCCC
Q 038577 207 NRIYTIARD--------CYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTA-CDYHRGLD 277 (860)
Q Consensus 207 ~~l~s~~~d--------g~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~ 277 (860)
+|+.++.+ ..|.+|+ ++.. ......+...+.. +.|+ ++
T Consensus 228 -~l~~~~~~~~~~~~~~~~l~~~d--~~~~----------------------------~~l~~~~~~~~~~~~~~s-dg- 274 (347)
T 2gop_A 228 -RILLYGKPEKKYMSEHNKLYIYD--GKEV----------------------------MGILDEVDRGVGQAKIKD-GK- 274 (347)
T ss_dssp -CEEEEECCSSSCCCSSCEEEEEC--SSCE----------------------------EESSTTCCSEEEEEEEET-TE-
T ss_pred -EEEEEEccccCCccccceEEEEC--CCce----------------------------EeccccCCcccCCccEEc-Cc-
Confidence 88877654 3577776 3211 1122334456775 8899 88
Q ss_pred EEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCccc
Q 038577 278 MVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYF 350 (860)
Q Consensus 278 ~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~ 350 (860)
+++++..++.+++| +.+++. ..+..+...+.+++|+| ..++++........+|.+. ++ ...+..|..
T Consensus 275 ~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 275 VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccH
Confidence 88899999999999 875554 33444567899999999 5555555442223666655 43 333444443
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=2.3e-17 Score=188.45 Aligned_cols=296 Identities=9% Similarity=-0.029 Sum_probs=206.4
Q ss_pred cccCCCCceEEEEecCCCCEEEEE--EcCCeEEEEECCCceeEEEEeecCceeE---------EEEEe--eCCCE-EEEE
Q 038577 259 DFSQAPSKVTACDYHRGLDMVVVG--FSNGVFGLYQMPDFVCIHLLSISREKIT---------TAVFN--ELGNW-LVFG 324 (860)
Q Consensus 259 ~~~~~~~~v~~~~~~~~~~~l~~~--~~~g~i~~~~~~~~~~~~~~~~~~~~i~---------~~~~s--~~~~~-l~~~ 324 (860)
.+..+...+..+++++++-.++.. ..++...+|....+.....+..+...+. ...|+ |||+. ++++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 345677889999999876555555 4478899998655555666666655555 56666 99999 8887
Q ss_pred EccCCcEEEEEcc--C-ceEEEEecC-----cccCeEEEEEcCCCCEEEEEeCC----------CcEEEEECCC------
Q 038577 325 CAKLGQLLVWEWR--S-ESYILKQQG-----HYFDVNCLAYSPDSQLLATGADD----------NKVKVWTVSS------ 380 (860)
Q Consensus 325 ~~~~g~i~v~d~~--~-~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d----------g~i~iwd~~~------ 380 (860)
...+..|.+++.. . +. ...+.. |...+..++|+|||+.|++++.+ ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 7656778888876 3 33 334444 56678899999999999998876 5899999987
Q ss_pred CeeEEEee-cCCCceEEEEEeeCCCEEEEEeCCC--------cEEEEEcc-cc--ceeeEeeCCCCCcEEEEEECCCCCE
Q 038577 381 GFCFVTFT-EHTNAVTALHFMANNHSLLSASLDG--------TVRAWDLF-RY--RNFRTFTTPSSRQFVSLASDQSGEV 448 (860)
Q Consensus 381 ~~~~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg--------~i~~wd~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (860)
+.. ..+. .+...+..++|+|||++|+.++.++ .|++||+. ++ .....+.......+..+.|+|||++
T Consensus 177 ~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 177 SAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred Cce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 554 4555 5667788899999999999877553 79999998 45 2344444443457889999999996
Q ss_pred EEEEecCC-CeEEEEECCCCceEEEecCcccC--------eEEEEEcCCCCEEEEEeCCCcEEEE--EccCCcceeEEcc
Q 038577 449 ICAGTLDS-FEIFVWSMKTGRLLDILSGHEGP--------VHGLVFSPTNATLASSSWDKTVRLW--NVFEGKGSVESFP 517 (860)
Q Consensus 449 l~~~~~~~-~~i~v~d~~~~~~~~~~~~h~~~--------v~~l~~s~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~ 517 (860)
++++..++ ..|++||+.+++.......+... +..++|+|+++++++++. +.+++| |+.+++ ...+..
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~ 333 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG 333 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC
Confidence 66665543 16777887777766555444332 567899999999999998 999999 544444 455555
Q ss_pred cCCCeEEEEEeeCCCEE--EEEeCCC--eEEEEeCCCCceeEEEec
Q 038577 518 HTHDVLTVVYRPDGRQL--ACSTLDG--QIHFWDPLNGELMYTIEG 559 (860)
Q Consensus 518 ~~~~v~~~~~s~~~~~l--~~~~~dg--~i~iwd~~~~~~~~~~~~ 559 (860)
+...+..+ +++++..+ ++++.+. .|.+||+.+++.......
T Consensus 334 ~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 334 PWTEWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp SCCEEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred CCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecC
Confidence 66667666 15555433 3344443 466677777775443333
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.77 E-value=5.1e-17 Score=185.60 Aligned_cols=325 Identities=11% Similarity=0.012 Sum_probs=211.9
Q ss_pred EeeccCCCeEEEEEcCCCCeEEEe--ecCCeEEEEeecccccCcccccceEeecCCCcEE---------EEEEc--cCCC
Q 038577 136 TLADCNDKVTALNWSPDSNYLLVG--SKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVV---------GCFFS--VDKK 202 (860)
Q Consensus 136 ~~~~h~~~v~~l~~s~d~~~l~s~--~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~---------~~~~~--~~~~ 202 (860)
.+.+|...+..++|++++-+++.. +.++...+|....+ .....+..|...+. ...|+ ||++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD------GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT------SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC------CCcceeCCCCccccccccccCCccceeeeecCCC
Confidence 456788999999999886666666 55889999997444 34556666665655 55565 9998
Q ss_pred CCccce-EEEEcC-CccEEEeeec--C-CCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccC-----CCCceEEEEe
Q 038577 203 TDKVNR-IYTIAR-DCYMFSWGFS--G-NDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQ-----APSKVTACDY 272 (860)
Q Consensus 203 ~~~~~~-l~s~~~-dg~i~~w~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~ 272 (860)
. |+..+. +..|.++++. + +.. ..+.. +...+..++|
T Consensus 92 -----~~la~~~~~~~~l~~~~~~~~g~~~~-----------------------------~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 92 -----PLLVFTHFGDQRLYAFEPDAPGGAVP-----------------------------RPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp -----CEEEEEBTTTCCEEEECTTSTTCCCC-----------------------------EECSCCCCSTTCEEEEEEEE
T ss_pred -----eEEEEEECCCCeEEEEcCCCCCCCCC-----------------------------EeccCCccCCCCccccCcEE
Confidence 8 776654 4566666654 2 211 11111 4456889999
Q ss_pred cCCCCEEEEEEcC----------CeEEEEECCC------ceeEEEEe-ecCceeEEEEEeeCCCEEEEEEccC-------
Q 038577 273 HRGLDMVVVGFSN----------GVFGLYQMPD------FVCIHLLS-ISREKITTAVFNELGNWLVFGCAKL------- 328 (860)
Q Consensus 273 ~~~~~~l~~~~~~----------g~i~~~~~~~------~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~~~------- 328 (860)
+|||+.|++++.+ ..|++|++.+ ++. ..+. .+...+..++|+|||++|++++.+.
T Consensus 138 spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 138 LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTC
T ss_pred CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCC
Confidence 9999999988876 5899999987 544 4444 5556788899999999999887553
Q ss_pred CcEEEEEcc-Cc---eEEEEecCcccCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeEEEeecCCCc--------e
Q 038577 329 GQLLVWEWR-SE---SYILKQQGHYFDVNCLAYSPDSQLLATGADDN--KVKVWTVSSGFCFVTFTEHTNA--------V 394 (860)
Q Consensus 329 g~i~v~d~~-~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~--------v 394 (860)
..|++||+. ++ ........|...+..++|+|||++++++..++ .|.+||..+++.......+... +
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccC
Confidence 479999998 56 44443445567899999999999888888888 5666676666654433333222 5
Q ss_pred EEEEEeeCCCEEEEEeCCCcEEEEEc--cccceeeEeeCCCCCcEEEEEECCCCCEEE--EEecCC-CeEEEEECCCCce
Q 038577 395 TALHFMANNHSLLSASLDGTVRAWDL--FRYRNFRTFTTPSSRQFVSLASDQSGEVIC--AGTLDS-FEIFVWSMKTGRL 469 (860)
Q Consensus 395 ~~i~~~~~~~~l~s~~~dg~i~~wd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~-~~i~v~d~~~~~~ 469 (860)
..++|+++++.+++++. +.+++|.+ .+++ .+.+..+ ...+..+. ++++..++ .++.+. ..|+++|+.+++.
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~-~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGP-WTEWAATL-TVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp CSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSS-CCEEEEEE-EEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred ceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCC-CCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 67889999999999988 99999944 4444 4555443 33455551 44444433 333332 2577778878876
Q ss_pred EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 038577 470 LDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWN 505 (860)
Q Consensus 470 ~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 505 (860)
......+...+....+++.....+.+..+..+..|-
T Consensus 373 ~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~ 408 (662)
T 3azo_A 373 RTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHI 408 (662)
T ss_dssp EEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEE
T ss_pred EEeecCCcccCCccccCcceEEEEEcCCCCEEEEEE
Confidence 555454543333333333332333322233455444
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=3e-16 Score=163.51 Aligned_cols=268 Identities=10% Similarity=0.069 Sum_probs=191.6
Q ss_pred ceEEEEecCCCCEEEEEE---------cCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccC--C--cEE
Q 038577 266 KVTACDYHRGLDMVVVGF---------SNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKL--G--QLL 332 (860)
Q Consensus 266 ~v~~~~~~~~~~~l~~~~---------~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~--g--~i~ 332 (860)
.+....+ +|+.++... .++.|.+|++.+++... + ..+..++|+|||+.+++..... + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4566677 888887643 25789999998876543 3 5678899999999999887653 3 488
Q ss_pred EEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCC---------------------------CcEEEEECCCCeeEE
Q 038577 333 VWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADD---------------------------NKVKVWTVSSGFCFV 385 (860)
Q Consensus 333 v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------------------------g~i~iwd~~~~~~~~ 385 (860)
+|++.+++.......+ . +..++|+|||+.|+.++.+ ..|++||+.+++.+.
T Consensus 89 ~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 8888887765544333 3 8999999999999887642 579999999888745
Q ss_pred EeecCCCceEEEEEeeCCCEEEEEeCCC-------cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC--
Q 038577 386 TFTEHTNAVTALHFMANNHSLLSASLDG-------TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS-- 456 (860)
Q Consensus 386 ~~~~~~~~v~~i~~~~~~~~l~s~~~dg-------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 456 (860)
.+.. . .+..+.|+|+| .++++..++ ...+|.+.+++ ...+... ..+..+ +|+|+.++..+.+.
T Consensus 167 ~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~--~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 167 EFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK--VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE--ESEEEE--EECSSCEEEEECCSSS
T ss_pred eecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC--cceeeE--CCCCCEEEEEEccccC
Confidence 5544 3 78899999999 777776542 44555554443 3333322 233433 99999888776442
Q ss_pred -----CeEEEEECCCCceEEEecCcccCeEE-EEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeC
Q 038577 457 -----FEIFVWSMKTGRLLDILSGHEGPVHG-LVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPD 530 (860)
Q Consensus 457 -----~~i~v~d~~~~~~~~~~~~h~~~v~~-l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~ 530 (860)
..|++|| +++......+|...+.. +.|+ ++ ++++++.++.+++| +.+++ ...+..+...+.+++|+|
T Consensus 239 ~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~-~~~~~~~~~~v~~~~~s~- 311 (347)
T 2gop_A 239 YMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE-IKPIAKGRHWIMGFDVDE- 311 (347)
T ss_dssp CCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS-EEEEECSSSEEEEEEESS-
T ss_pred CccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc-eEEEecCCCeEEeeeeeC-
Confidence 3788998 66666666667778886 9999 88 88999999999999 88554 455556677899999999
Q ss_pred CCEEEEEeCCCeE-EEEeCCCCceeEEEecc
Q 038577 531 GRQLACSTLDGQI-HFWDPLNGELMYTIEGR 560 (860)
Q Consensus 531 ~~~l~~~~~dg~i-~iwd~~~~~~~~~~~~~ 560 (860)
.++++++.++.. .+|.++ ++ ...+..+
T Consensus 312 -~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~ 339 (347)
T 2gop_A 312 -IVVYLKETATRLRELFTWD-GE-EKQLTDY 339 (347)
T ss_dssp -SEEEEEECSSSCCEEEEES-SS-EEECCCT
T ss_pred -cEEEEEcCCCChHHheEeC-Cc-EEEeccc
Confidence 677777777654 666665 44 3334443
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=3.7e-16 Score=160.67 Aligned_cols=244 Identities=13% Similarity=0.122 Sum_probs=185.1
Q ss_pred ccCeEEEEEcCCCCEEEEEeCC------------------------CcEEEEECCCCeeEEEee-cCCCceEEEEEeeCC
Q 038577 349 YFDVNCLAYSPDSQLLATGADD------------------------NKVKVWTVSSGFCFVTFT-EHTNAVTALHFMANN 403 (860)
Q Consensus 349 ~~~v~~~~~s~~~~~l~~~~~d------------------------g~i~iwd~~~~~~~~~~~-~~~~~v~~i~~~~~~ 403 (860)
...+.+++++|+|+++++...+ +.|.+||..+++.+..+. .+-..+..+++++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4568999999999999888777 479999998888877664 344678999999999
Q ss_pred CEEEEEeCCCcEEEEEccccc-eeeEee--------CCCCCcEEEEEECC-CCCEEEEEe-cCCCeEEEEECCCCceEEE
Q 038577 404 HSLLSASLDGTVRAWDLFRYR-NFRTFT--------TPSSRQFVSLASDQ-SGEVICAGT-LDSFEIFVWSMKTGRLLDI 472 (860)
Q Consensus 404 ~~l~s~~~dg~i~~wd~~~~~-~~~~~~--------~~~~~~~~~~~~~~-~~~~l~~~~-~~~~~i~v~d~~~~~~~~~ 472 (860)
+.+++...++.|+.|+..... .+..+. .........++++| ++.++++.+ .++ .|++|| .+++.+..
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~-~I~~~~-~~g~~~~~ 180 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS-RIVQFS-PSGKFVTQ 180 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC-EEEEEC-TTSCEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC-eEEEEc-CCCCEEEE
Confidence 988888889999999985442 344442 12233578999999 777777765 455 999999 56777777
Q ss_pred ecC----------cccCeEEEEEcCC-CCEEEEEeCCCcEEEEEccCCcceeEEc--ccCCCeEEEEEeeCCCEEEEE--
Q 038577 473 LSG----------HEGPVHGLVFSPT-NATLASSSWDKTVRLWNVFEGKGSVESF--PHTHDVLTVVYRPDGRQLACS-- 537 (860)
Q Consensus 473 ~~~----------h~~~v~~l~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~-- 537 (860)
+.. +......++++|+ +.++++...++.|++||..+++....+. .+...+.+++|+| +..+++.
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~ 259 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGK 259 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECC
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCC
Confidence 642 2344899999998 7777777788999999998777555553 4566788999999 4333333
Q ss_pred -----eCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 038577 538 -----TLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVAD 612 (860)
Q Consensus 538 -----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~ 612 (860)
..+..|++||..+++.+..+..... +...+..++++|+|..+++...++.|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~-----------------~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKPVRK-----------------HFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECCSSS-----------------CCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcCCCC-----------------ccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3345899999999998888742111 123489999999998888888899999999754
No 179
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.75 E-value=1.5e-11 Score=142.89 Aligned_cols=514 Identities=8% Similarity=0.041 Sum_probs=321.7
Q ss_pred CCCEEEeeeCCeEEEEECCCCcEEeeccC-----CccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeec-CC-
Q 038577 22 QNTKLISPVGNRVSVTDLIKSKTVTLPVE-----SSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRF-KY- 94 (860)
Q Consensus 22 dg~~l~~~~~~~i~v~d~~~~~~~~~~~~-----h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~-~~- 94 (860)
+| +|=.|..+-+..||-.+-+....... ....|.++...++|.+.+. +. +-+..||..+++....... ..
T Consensus 53 ~G-~lWigT~~GL~ryDG~~f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWig-T~-~Gl~~yd~~~~~f~~~~~~~~~~ 129 (795)
T 4a2l_A 53 RG-NMWFATYDGVNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIG-TR-DGLSRYDEEKDIFQNFFYEKNGK 129 (795)
T ss_dssp TS-CEEEEETTEEEEECSSCEEEECCCTTCTTSCSCSCEEEEEECTTSCEEEE-ES-SCEEEEETTTTEEEEECCEETTE
T ss_pred CC-CEEEeecCcCcccCCCceEEEeCCCCCCCcccccceeEEEECCCCCEEEE-eC-CchheeCCCCCeEEeccccccCC
Confidence 44 55566667788887543222211101 2356999999999986654 43 4589999887765432221 11
Q ss_pred --ceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEee-cc-CCC-eEEEEEcCCCCeEEEeecCCeEEEEe
Q 038577 95 --PVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLA-DC-NDK-VTALNWSPDSNYLLVGSKDLAVRLFY 169 (860)
Q Consensus 95 --~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~-~h-~~~-v~~l~~s~d~~~l~s~~~dg~v~vwd 169 (860)
.|.++...++|.+.+... +.+..|+..+++. ..+. ++ ... |.++...+++.+.+ ++.++.+..|+
T Consensus 130 ~~~i~~i~~d~~g~lwi~t~-~gl~~~~~~~~~~--------~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~ 199 (795)
T 4a2l_A 130 HLQVNGIEEISPEQLLISTP-EGLIMFDIKESKF--------IDDSFSTAMHKTIASTLYRQGDQIYI-GTSTDGLYTYS 199 (795)
T ss_dssp ECCCCEEEEEETTEEEEEET-TEEEEEETTTTEE--------ECSSSCHHHHTCCEEEEEEETTEEEE-EESSSCEEEEE
T ss_pred CceEEEEEECCCCCEEEEEC-CceEEEECCCCEE--------EeccCCCCCCcceEEEEECCCCCEEE-EECCCCEEEEe
Confidence 188999988887666544 6789999876531 1111 11 123 88888888876554 55555588888
Q ss_pred ecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCccee
Q 038577 170 VKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRV 249 (860)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (860)
..+. .. .......+...|.++...+++. +..++.++-+..|+..++..
T Consensus 200 ~~~~-~~----~~~~~~~~~~~i~~i~~d~~g~------lwigt~~~Gl~~~~~~~~~~--------------------- 247 (795)
T 4a2l_A 200 ITQK-TF----EKVIPILGTKQIQAILQQSPTR------IWVATEGAGLFLINPKTKEI--------------------- 247 (795)
T ss_dssp TTTC-CE----EECC----CCCEEEEEEEETTE------EEEEEBSSCEEEEETTTTEE---------------------
T ss_pred CCCC-eE----EEecCCCCCCeeEEEEEcCCCC------EEEEECCCCeEEEeCCCCeE---------------------
Confidence 7655 11 0000112356788888877774 55666554588888765321
Q ss_pred eeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEee-------cCceeEEEEEeeCCCEEE
Q 038577 250 KKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSI-------SREKITTAVFNELGNWLV 322 (860)
Q Consensus 250 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~-------~~~~i~~~~~s~~~~~l~ 322 (860)
..+..............|.++...++|.+ .+|+.+ -+.+|+..++........ ....|.++...++|..-+
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 325 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQNRL-WIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL 325 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTSCE-EEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCCCE-EEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE
Confidence 11100000001112356999999888874 455555 488899877665433221 235688998888887554
Q ss_pred EEEccCCcEEEEEccCceEEEEecC------cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeec-------
Q 038577 323 FGCAKLGQLLVWEWRSESYILKQQG------HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTE------- 389 (860)
Q Consensus 323 ~~~~~~g~i~v~d~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------- 389 (860)
++.. +-|..|+..++........ ....|.++...++|. |-.|+.++-|..|+..++........
T Consensus 326 -gt~~-~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 326 -GTYF-GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARG 402 (795)
T ss_dssp -EESS-SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------C
T ss_pred -EECC-CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccC
Confidence 4433 6788888776543322111 234689999988886 45577777899999877654432211
Q ss_pred -CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeC----CCCCcEEEEEECCCCCEEEEEecCCCeEEEEEC
Q 038577 390 -HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTT----PSSRQFVSLASDQSGEVICAGTLDSFEIFVWSM 464 (860)
Q Consensus 390 -~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~ 464 (860)
....|.+++..++++.|..|+.++-+..||..+++... +.. .....+.++..+++|.+.+... + .+.+||.
T Consensus 403 l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~--Gl~~~~~ 478 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGTL-S--ALVRFNP 478 (795)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEES-S--CEEEEET
T ss_pred CCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEec-C--ceeEEeC
Confidence 24578999988888757778877789999987765433 221 1234688999999888666554 4 4999998
Q ss_pred CCCceEEEecC------cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEc-------ccCCCeEEEEEeeCC
Q 038577 465 KTGRLLDILSG------HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESF-------PHTHDVLTVVYRPDG 531 (860)
Q Consensus 465 ~~~~~~~~~~~------h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~s~~~ 531 (860)
.+++....... +...|.++...++|.+.+... +-+..||..++.. ... .....|.++...++|
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g 554 (795)
T 4a2l_A 479 EQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNG 554 (795)
T ss_dssp TTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTS
T ss_pred CCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCC
Confidence 87765433211 236789999998888666544 4488899877653 221 134578999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECC
Q 038577 532 RQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 532 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~ 611 (860)
++.+... . -+..||..+++.. .+...... ....|.++..+++|++.+++ . +-|..|+..
T Consensus 555 ~lWigT~-~-Gl~~~d~~~~~~~-~~~~~~gl----------------~~~~i~~i~~d~~g~lWi~t-~-~Gl~~~~~~ 613 (795)
T 4a2l_A 555 IIWVGTR-E-GFYCFNEKDKQIK-RYNTTNGL----------------PNNVVYGILEDSFGRLWLST-N-RGISCFNPE 613 (795)
T ss_dssp CEEEEES-S-CEEEEETTTTEEE-EECGGGTC----------------SCSCEEEEEECTTSCEEEEE-T-TEEEEEETT
T ss_pred CEEEEeC-C-CceeECCCCCcEE-EeCCCCCC----------------chhheEEEEECCCCCEEEEc-C-CceEEEcCC
Confidence 8665543 4 4888998776433 23222111 12348899999999877765 3 457888887
Q ss_pred Cce
Q 038577 612 DQV 614 (860)
Q Consensus 612 ~~~ 614 (860)
+++
T Consensus 614 ~~~ 616 (795)
T 4a2l_A 614 TEK 616 (795)
T ss_dssp TTE
T ss_pred CCc
Confidence 765
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.74 E-value=1.4e-15 Score=157.38 Aligned_cols=277 Identities=10% Similarity=0.028 Sum_probs=195.4
Q ss_pred ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 038577 307 EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVT 386 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 386 (860)
..+.++.|++++..++....+ +.++.| .+.....+..+...+.+++|+++|++++++..++.|.+||..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~ 81 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISE-SELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP 81 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCG-GGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE
T ss_pred cccceeeecCCccceeEEeec-ccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE
Confidence 346677788877666555443 788888 3444555566667789999999999888888899999999988876655
Q ss_pred eecCCCceEEEEEeeCCCEEEEEeCC----CcEEEEEccccceeeEee-CCCCCcEEEEEECCCCCEEEEEecC-----C
Q 038577 387 FTEHTNAVTALHFMANNHSLLSASLD----GTVRAWDLFRYRNFRTFT-TPSSRQFVSLASDQSGEVICAGTLD-----S 456 (860)
Q Consensus 387 ~~~~~~~v~~i~~~~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 456 (860)
...+...+.+++++++++.+++...+ +.|.+||..++.....+. ......+..++++|+|+++++...+ .
T Consensus 82 ~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 82 FVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp EECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 54567789999999999877777666 689999988776543333 2233468899999999887766532 2
Q ss_pred CeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEE-EeCCCcEEEEEccC-CcceeE-----E--cccCCCeEEEEE
Q 038577 457 FEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLAS-SSWDKTVRLWNVFE-GKGSVE-----S--FPHTHDVLTVVY 527 (860)
Q Consensus 457 ~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s-~~~dg~i~iwd~~~-~~~~~~-----~--~~~~~~v~~~~~ 527 (860)
+.|+.+|..+++..... .+...+..++|+|+++.++. .+.++.|.+||+.+ +..... . ......+..+++
T Consensus 162 ~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI 240 (333)
T ss_dssp EEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE
T ss_pred ceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEE
Confidence 37888887766554333 34456789999999986654 45578999999964 322211 1 111246788999
Q ss_pred eeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCC
Q 038577 528 RPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSK 603 (860)
Q Consensus 528 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg 603 (860)
+++|+++++...++.|.+||. +++.+..+..+.... .+...+.+++|+||++.|+.++.++
T Consensus 241 d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~--------------g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 241 DSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDE--------------GHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp BTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGG--------------TCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCcc--------------ccccCcceEEECCCCCEEEEEeCcc
Confidence 999998888878899999998 566666664332100 0001378999999998877666554
No 181
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.73 E-value=3.4e-12 Score=148.20 Aligned_cols=513 Identities=10% Similarity=0.062 Sum_probs=319.7
Q ss_pred EEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCcc---CeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-c
Q 038577 18 AVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSS---NICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-F 92 (860)
Q Consensus 18 ~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~---~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-~ 92 (860)
+... +|.+. .+..+.+..||..+++.......... .|.++...++|.+.+... +.+..||..+++...... .
T Consensus 93 i~~d~~g~lW-igT~~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~--~gl~~~~~~~~~~~~~~~~~ 169 (795)
T 4a2l_A 93 VKTDSQGRVW-IGTRDGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP--EGLIMFDIKESKFIDDSFST 169 (795)
T ss_dssp EEECTTSCEE-EEESSCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET--TEEEEEETTTTEEECSSSCH
T ss_pred EEECCCCCEE-EEeCCchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC--CceEEEECCCCEEEeccCCC
Confidence 4445 66544 45556799999988876544321111 289999999998766544 568999987765432111 0
Q ss_pred -CCc-eeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEee
Q 038577 93 -KYP-VNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYV 170 (860)
Q Consensus 93 -~~~-v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~ 170 (860)
... |.++...++|.+.+...++.+..|+..+++... .. ...+...|.++...+++.+.+ ++.++-+..||.
T Consensus 170 ~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~-----~~-~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~ 242 (795)
T 4a2l_A 170 AMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEK-----VI-PILGTKQIQAILQQSPTRIWV-ATEGAGLFLINP 242 (795)
T ss_dssp HHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEE-----CC-----CCCEEEEEEEETTEEEE-EEBSSCEEEEET
T ss_pred CCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEE-----ec-CCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeC
Confidence 112 888999888877765555568899987765210 00 112346788888888876554 444445888887
Q ss_pred cccccCcccccceEee-------cCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCC
Q 038577 171 KEKLKGIHTNKPFLLL-------GHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPG 243 (860)
Q Consensus 171 ~~~~~~~~~~~~~~~~-------~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~ 243 (860)
.+. ....... -....|.++...+++. |..++.+ -+.+|+..++.
T Consensus 243 ~~~------~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~------lWigt~~-Gl~~~~~~~~~---------------- 293 (795)
T 4a2l_A 243 KTK------EIKNYLHSPSNPKSISSNYIRSLAMDSQNR------LWIGTFN-DLNIYHEGTDS---------------- 293 (795)
T ss_dssp TTT------EEEEECCCTTCTTSCSCSBEEEEEECTTSC------EEEEESS-CEEEEETTTTE----------------
T ss_pred CCC------eEEEeecCCCCccccCCCeEEEEEEcCCCC------EEEEeCC-hhheEcCCCCe----------------
Confidence 654 1111111 1245689998888875 6666655 57788766531
Q ss_pred CCcceeeeEEeeee---ccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEe------ecCceeEEEEE
Q 038577 244 TPERRVKKWGLLRK---DDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLS------ISREKITTAVF 314 (860)
Q Consensus 244 ~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~------~~~~~i~~~~~ 314 (860)
+..... ....-....|.++...++|. +.+|+.++-|..++........... .....|.++..
T Consensus 294 --------~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 294 --------FASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp --------EEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE
T ss_pred --------EEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE
Confidence 111110 01112335699999999887 5667777778888875544322111 12346888888
Q ss_pred eeCCCEEEEEEccCCcEEEEEccCceEEEEecC--------cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 038577 315 NELGNWLVFGCAKLGQLLVWEWRSESYILKQQG--------HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVT 386 (860)
Q Consensus 315 s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 386 (860)
.++|...+ ++.. +-|..|+..++........ ....|.++...++|..|..|+.++.+..||..+++....
T Consensus 365 d~~g~lWi-Gt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 365 DKDKNLWI-GTND-GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENF 442 (795)
T ss_dssp CTTSCEEE-EESS-SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCCCEEE-EECC-CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEe
Confidence 88776544 4443 6799999887765443211 235689999988888566777777899999887764433
Q ss_pred ee----cCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeC-----CCCCcEEEEEECCCCCEEEEEecCCC
Q 038577 387 FT----EHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTT-----PSSRQFVSLASDQSGEVICAGTLDSF 457 (860)
Q Consensus 387 ~~----~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (860)
.. .....|.++...+++...+ |+. +.+..||..+++....... .....+.++..+++|++.+... +
T Consensus 443 ~~~~~~l~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-- 517 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDGEGNLWL-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-- 517 (795)
T ss_dssp CTTTSCCSCSCEEEEEECSSSCEEE-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S--
T ss_pred ecCCCCcCCCeeEEEEECCCCCEEE-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C--
Confidence 21 1345789999888886544 444 4588899876544322211 1234688899999998776554 4
Q ss_pred eEEEEECCCCceEEEec-------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc----cCCCeEEEE
Q 038577 458 EIFVWSMKTGRLLDILS-------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP----HTHDVLTVV 526 (860)
Q Consensus 458 ~i~v~d~~~~~~~~~~~-------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~ 526 (860)
.+..||..+++. .+. .+...|.++...++|.+.++.. . -+..||..+.+ ...... ....|.++.
T Consensus 518 Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~-~~~~~~~~gl~~~~i~~i~ 592 (795)
T 4a2l_A 518 GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQ-IKRYNTTNGLPNNVVYGIL 592 (795)
T ss_dssp CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTE-EEEECGGGTCSCSCEEEEE
T ss_pred ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCc-EEEeCCCCCCchhheEEEE
Confidence 499999887765 222 1345789999999998665443 4 48889987664 222221 234688899
Q ss_pred EeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcE--EEEEEecCCCEEEEecCCCe
Q 038577 527 YRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCF--TTLCYSADGSYILAGGSSKY 604 (860)
Q Consensus 527 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~l~~s~~g~~l~~~~~dg~ 604 (860)
..++|++.+++ . +-|..|+..+++. ..+....... ...+ .+++..++|++++ |+.+|
T Consensus 593 ~d~~g~lWi~t-~-~Gl~~~~~~~~~~-~~~~~~dGl~----------------~~~f~~~~~~~~~~G~l~~-g~~~G- 651 (795)
T 4a2l_A 593 EDSFGRLWLST-N-RGISCFNPETEKF-RNFTESDGLQ----------------SNQFNTASYCRTSVGQMYF-GGING- 651 (795)
T ss_dssp ECTTSCEEEEE-T-TEEEEEETTTTEE-EEECGGGTCS----------------CSCEEEEEEEECTTSCEEE-EETTE-
T ss_pred ECCCCCEEEEc-C-CceEEEcCCCCcE-EEcCCcCCCc----------------cccCccCceeECCCCeEEE-ecCCc-
Confidence 98888866655 3 4588899877653 3343332211 1112 5777888897666 55566
Q ss_pred EEEEECC
Q 038577 605 ICMYDVA 611 (860)
Q Consensus 605 v~vwd~~ 611 (860)
+..++..
T Consensus 652 l~~~~p~ 658 (795)
T 4a2l_A 652 ITTFRPE 658 (795)
T ss_dssp EEEECGG
T ss_pred eEEEcHH
Confidence 5555543
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=1.9e-15 Score=155.42 Aligned_cols=241 Identities=12% Similarity=0.079 Sum_probs=182.5
Q ss_pred ceeEEEEEeeCCCEEEEEEccC-----------------------CcEEEEEccCceEEEEec-CcccCeEEEEEcCCCC
Q 038577 307 EKITTAVFNELGNWLVFGCAKL-----------------------GQLLVWEWRSESYILKQQ-GHYFDVNCLAYSPDSQ 362 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~-----------------------g~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~ 362 (860)
..+.+++++++|+.+++...+. +.|.+||..+++...... .+......++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 5688999999998776655431 479999999888776654 4556789999999999
Q ss_pred EEEEEeCCCcEEEEECCCCe-eEEEe---------ecCCCceEEEEEee-CCCEEEEEe-CCCcEEEEEccccceeeEee
Q 038577 363 LLATGADDNKVKVWTVSSGF-CFVTF---------TEHTNAVTALHFMA-NNHSLLSAS-LDGTVRAWDLFRYRNFRTFT 430 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~-~~~~~---------~~~~~~v~~i~~~~-~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~ 430 (860)
++++...++.|++|+..... .+..+ ..+-..+..++++| ++..+++.+ .++.|++|+ .+++....+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEec
Confidence 88888889999999976442 44444 23445789999999 788888876 689999999 5666666554
Q ss_pred CCC---------CCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec--CcccCeEEEEEcCCCCEEEEE----
Q 038577 431 TPS---------SRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS--GHEGPVHGLVFSPTNATLASS---- 495 (860)
Q Consensus 431 ~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~---- 495 (860)
... -.....++++|++..++++...++.|++||..+++.+..+. .+...+.+++|+| +..+++.
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~ 261 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPY 261 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEE
Confidence 221 12378999999955555555544599999999899988874 4567889999999 4333333
Q ss_pred ---eCCCcEEEEEccCCcceeEEc---ccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q 038577 496 ---SWDKTVRLWNVFEGKGSVESF---PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 496 ---~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 549 (860)
..+..|++||..+++....+. .+...+..++++|+|.++++...++.|++|++.
T Consensus 262 v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred eccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 334589999999988655542 466778999999999888888889999999975
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.73 E-value=5e-15 Score=151.83 Aligned_cols=268 Identities=9% Similarity=-0.024 Sum_probs=195.4
Q ss_pred CCcEEEEEccCceEEEEec------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEee
Q 038577 328 LGQLLVWEWRSESYILKQQ------GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMA 401 (860)
Q Consensus 328 ~g~i~v~d~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~ 401 (860)
++.|.++|.++++....+. ........+++. +++.+++...++.|.+||..+++.+.++. ....+..+++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC
Confidence 5899999999988765431 112345677774 44555666667999999999999988885 456789999999
Q ss_pred CCCEEEEEeCCCcEEEEEccccceeeEeeCCCCC----cEEEEEECCCCCEEEEEec--CCCeEEEEECCCCceEEEecC
Q 038577 402 NNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSR----QFVSLASDQSGEVICAGTL--DSFEIFVWSMKTGRLLDILSG 475 (860)
Q Consensus 402 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~--~~~~i~v~d~~~~~~~~~~~~ 475 (860)
+++.+++...++.|.+||..+++....+...... ....+++ ++..++++.. ++ .|.++|..+++.+..+..
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~-~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQN-RILKIDTETDKVVDELTI 170 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCC-EEEEEETTTTEEEEEEEC
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCC-EEEEEECCCCeEEEEEEc
Confidence 9854445448899999999999888777654411 3345666 4556666654 44 999999999998887764
Q ss_pred cccCeEEEEEcCCCCEEEEEeCC----------CcEEEEEccCCcceeEEcc-cCCCeEEEEEeeCCCEEEEEeCCCeEE
Q 038577 476 HEGPVHGLVFSPTNATLASSSWD----------KTVRLWNVFEGKGSVESFP-HTHDVLTVVYRPDGRQLACSTLDGQIH 544 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~ 544 (860)
. .....++++|+|++++++..+ +.|.++|..+++....... .......++|+|+++.|+++.. .|.
T Consensus 171 g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~ 247 (328)
T 3dsm_A 171 G-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIW 247 (328)
T ss_dssp S-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEE
T ss_pred C-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEE
Confidence 3 345789999999977776654 7899999988874434332 2346899999999999988865 899
Q ss_pred EEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEec-CCCEEEEe----cCCCeEEEEECCCceEEEEE
Q 038577 545 FWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSA-DGSYILAG----GSSKYICMYDVADQVLLRRF 619 (860)
Q Consensus 545 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~-~g~~l~~~----~~dg~v~vwd~~~~~~~~~~ 619 (860)
+||..+++......... .+.....++++| +++..++. ..++.|.+||.. |+.++++
T Consensus 248 ~~d~~t~~~~~~~~~~~------------------~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEF------------------RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEETTCSSCCSSCSBCC------------------CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EEECCCCceeeeeeecC------------------CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 99998887531100000 023478999999 55566665 578999999998 9999888
Q ss_pred eec
Q 038577 620 QIT 622 (860)
Q Consensus 620 ~~~ 622 (860)
...
T Consensus 309 ~~G 311 (328)
T 3dsm_A 309 YVG 311 (328)
T ss_dssp EEE
T ss_pred Eec
Confidence 653
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=9.1e-15 Score=167.61 Aligned_cols=276 Identities=10% Similarity=0.062 Sum_probs=195.4
Q ss_pred CCCCEEEEEEcC-----CeEEEEECCCceeEEEEee------cCceeEEEEEeeCCCEEEEEEccCC----cEEEEEccC
Q 038577 274 RGLDMVVVGFSN-----GVFGLYQMPDFVCIHLLSI------SREKITTAVFNELGNWLVFGCAKLG----QLLVWEWRS 338 (860)
Q Consensus 274 ~~~~~l~~~~~~-----g~i~~~~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~~~g----~i~v~d~~~ 338 (860)
|+|++++....+ +.+.+.+...++....+.. +...+..++|||||++++++....| .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 888888765543 2445555544443333222 2235889999999999999887655 899999999
Q ss_pred ceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCc----------------EEEEECCCCee----EEEeecCCCceEEEE
Q 038577 339 ESYILKQQGHYFDVNCLAYSPDSQLLATGADDNK----------------VKVWTVSSGFC----FVTFTEHTNAVTALH 398 (860)
Q Consensus 339 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~----------------i~iwd~~~~~~----~~~~~~~~~~v~~i~ 398 (860)
++.......+ ..+..++|+|||+.|+.++.++. |++|++.++.. +.....|...+..+.
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 9876543222 23678999999999999888766 99999988752 222223455688999
Q ss_pred EeeCCCEEEEEeC-----CCcEEEEEccc------cc-eeeEeeCCCCCcEEEEEECCCCCEEEEEecCC---CeEEEEE
Q 038577 399 FMANNHSLLSASL-----DGTVRAWDLFR------YR-NFRTFTTPSSRQFVSLASDQSGEVICAGTLDS---FEIFVWS 463 (860)
Q Consensus 399 ~~~~~~~l~s~~~-----dg~i~~wd~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~i~v~d 463 (860)
|+|||++|+.++. +..+.+||+.+ +. ..+.+....... . ..++++|..++..+..+ ..|.+||
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-Y-DYVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-E-EEEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-E-EEEeccCCEEEEEECCCCCCCEEEEEe
Confidence 9999999887764 56899999986 43 345554443322 2 24788999888776543 3799999
Q ss_pred CCCCce--EEEecCccc--CeEEEEEcCCCCEEEEEeCCCc--EEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEE
Q 038577 464 MKTGRL--LDILSGHEG--PVHGLVFSPTNATLASSSWDKT--VRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACS 537 (860)
Q Consensus 464 ~~~~~~--~~~~~~h~~--~v~~l~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 537 (860)
+.++.. ...+..|.. .+..++|++++.++++...|+. |++||+.+++....+..+...+..+.++|++..++..
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 988752 344444543 6888999988888888888885 5566775666555555567778899999999876644
Q ss_pred e----CCCeEEEEeCCCCc
Q 038577 538 T----LDGQIHFWDPLNGE 552 (860)
Q Consensus 538 ~----~dg~i~iwd~~~~~ 552 (860)
. ..+.|+.||+.+++
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 2 34789999999887
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=5e-15 Score=169.78 Aligned_cols=277 Identities=10% Similarity=0.029 Sum_probs=197.1
Q ss_pred eCCCEEEEEEccCC----cEEEEEccCceEEEEe------cCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCC
Q 038577 316 ELGNWLVFGCAKLG----QLLVWEWRSESYILKQ------QGHYFDVNCLAYSPDSQLLATGADDN-----KVKVWTVSS 380 (860)
Q Consensus 316 ~~~~~l~~~~~~~g----~i~v~d~~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~ 380 (860)
|+|++++......+ .+.+.+...+.....+ .+|...+..++|||||++|+.+..++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 88888887765433 3444444444332222 12334588999999999998876543 899999999
Q ss_pred CeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCc----------------EEEEEcccccee--eEeeCC-CCCcEEEEE
Q 038577 381 GFCFVTFTEHTNAVTALHFMANNHSLLSASLDGT----------------VRAWDLFRYRNF--RTFTTP-SSRQFVSLA 441 (860)
Q Consensus 381 ~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~----------------i~~wd~~~~~~~--~~~~~~-~~~~~~~~~ 441 (860)
++.......+ ..+..++|+|||+.|+.++.++. |++|++.++... ..+..+ +...+..+.
T Consensus 161 g~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 9877643322 23678999999999998888766 999999877633 222322 234577899
Q ss_pred ECCCCCEEEEEecC----CCeEEEEECCC------Cc-eEEEecCcccCeEEEEEcCCCCEEEEEeCCC----cEEEEEc
Q 038577 442 SDQSGEVICAGTLD----SFEIFVWSMKT------GR-LLDILSGHEGPVHGLVFSPTNATLASSSWDK----TVRLWNV 506 (860)
Q Consensus 442 ~~~~~~~l~~~~~~----~~~i~v~d~~~------~~-~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg----~i~iwd~ 506 (860)
++|||++|+..... ...|++||+.+ +. ....+..+...+.. .|+|+|+.|+..+.++ .|.+||+
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~ 318 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDF 318 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 99999999887651 23899999987 53 35566666666655 5889999888776543 5999999
Q ss_pred cCCcc--eeEEcccCC--CeEEEEEeeCCCEEEEEeCCCe--EEEEeCCCCceeEEEecccccCCCccccccccccccCC
Q 038577 507 FEGKG--SVESFPHTH--DVLTVVYRPDGRQLACSTLDGQ--IHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSS 580 (860)
Q Consensus 507 ~~~~~--~~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (860)
.++.. ...+..+.. .+..++|++++.++++...++. |.+|++.+|+.+..+..+..
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~------------------ 380 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVG------------------ 380 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSS------------------
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCc------------------
Confidence 87642 244555544 6888999988888888888885 67778878887777665432
Q ss_pred CCcEEEEEEecCCCEEEEec----CCCeEEEEECCCce
Q 038577 581 GKCFTTLCYSADGSYILAGG----SSKYICMYDVADQV 614 (860)
Q Consensus 581 ~~~i~~l~~s~~g~~l~~~~----~dg~v~vwd~~~~~ 614 (860)
.+..++++|+++.++... ..+.|+.||+.+++
T Consensus 381 --~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 381 --SVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp --EEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred --eEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 488899999998766432 34789999999876
No 186
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.73 E-value=4.2e-15 Score=150.65 Aligned_cols=282 Identities=12% Similarity=0.058 Sum_probs=204.1
Q ss_pred EEEeeCCCEEEEEEcc----CCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEe----------CCCcEEEEE
Q 038577 312 AVFNELGNWLVFGCAK----LGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGA----------DDNKVKVWT 377 (860)
Q Consensus 312 ~~~s~~~~~l~~~~~~----~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iwd 377 (860)
....|+++.++++... ++.|.++|..+++.+..+.....+ . ++++|||++++++. .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 4456899999888764 579999999999999888655554 4 99999999888775 357899999
Q ss_pred CCCCeeEEEeecCC-------CceEEEEEeeCCCEEEEEeC--CCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCE
Q 038577 378 VSSGFCFVTFTEHT-------NAVTALHFMANNHSLLSASL--DGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEV 448 (860)
Q Consensus 378 ~~~~~~~~~~~~~~-------~~v~~i~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (860)
..+++.+.++.-.. .....+.++|||++++++.. ++.|.++|+.+++.+.++..+.. ...+....+.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~----~~~~P~g~~~ 191 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC----YHIFPTAPDT 191 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc----ceeecCCCce
Confidence 99999988875322 24667999999999888864 68999999999999998876542 1222233445
Q ss_pred EEEEecCCCeEEEEECCC-CceEEEecCc----ccCeE-EEEEc-CCCCEEEEEeCCCcEEEEEccCCcce--eEEc--c
Q 038577 449 ICAGTLDSFEIFVWSMKT-GRLLDILSGH----EGPVH-GLVFS-PTNATLASSSWDKTVRLWNVFEGKGS--VESF--P 517 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~-~~~~~~~~~h----~~~v~-~l~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~--~ 517 (860)
+++.+.|+ .+.+.++.+ ++.......+ ..++. ...|. ++|++++ .+.+|.|++.|+.+.... ..+. .
T Consensus 192 ~~~~~~DG-~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~ 269 (386)
T 3sjl_D 192 FFMHCRDG-SLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALT 269 (386)
T ss_dssp EEEEETTS-CEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSC
T ss_pred eEEECCCC-CEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccc
Confidence 55556666 666777765 5543222111 12221 24554 6775544 666899999998765421 1111 0
Q ss_pred --------cCCCeEEEEEeeCCCEEEEEeC----------CCeEEEEeCCCCceeEEEecccccCCCccccccccccccC
Q 038577 518 --------HTHDVLTVVYRPDGRQLACSTL----------DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSS 579 (860)
Q Consensus 518 --------~~~~v~~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 579 (860)
.......++++|+++.+++... .+.|.++|+.+++.+..+.....
T Consensus 270 ~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~----------------- 332 (386)
T 3sjl_D 270 EAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE----------------- 332 (386)
T ss_dssp HHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-----------------
T ss_pred cccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC-----------------
Confidence 1234445788999999888753 25799999999999999887653
Q ss_pred CCCcEEEEEEecCCC-EEEEe-cCCCeEEEEECCCceEEEEEeec
Q 038577 580 SGKCFTTLCYSADGS-YILAG-GSSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 580 ~~~~i~~l~~s~~g~-~l~~~-~~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
+.++++++|++ +|++. ..++.|.++|..+++.++++...
T Consensus 333 ----~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 333 ----IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp ----ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred ----cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 78999999997 66664 56899999999999999988654
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=1e-14 Score=149.54 Aligned_cols=268 Identities=10% Similarity=0.015 Sum_probs=196.6
Q ss_pred cCCeEEEEECCCceeEEEEee------cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEE
Q 038577 284 SNGVFGLYQMPDFVCIHLLSI------SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAY 357 (860)
Q Consensus 284 ~~g~i~~~~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 357 (860)
.++.|.++|..+++....+.. .......+.+ ++..+.++...++.|.+||..+++.+..+.. ......+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~--~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~ 91 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI--RDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHF 91 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE--ETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE--ECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEE
Confidence 378999999998887654321 1123456666 4566666666669999999999998887753 456889999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCC-----CceEEEEEeeCCCEEEEEe--CCCcEEEEEccccceeeEee
Q 038577 358 SPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHT-----NAVTALHFMANNHSLLSAS--LDGTVRAWDLFRYRNFRTFT 430 (860)
Q Consensus 358 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~ 430 (860)
+++++.+++...++.|.+||..+++....+.... ..+..+++ .++ .++.+. .++.|.++|+.+++....+.
T Consensus 92 ~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 92 LSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp EETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred eCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 9998544444378999999999998887765433 14567777 444 455444 48899999999998888776
Q ss_pred CCCCCcEEEEEECCCCCEEEEEecC---------CCeEEEEECCCCceEEEecCc-ccCeEEEEEcCCCCEEEEEeCCCc
Q 038577 431 TPSSRQFVSLASDQSGEVICAGTLD---------SFEIFVWSMKTGRLLDILSGH-EGPVHGLVFSPTNATLASSSWDKT 500 (860)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~l~~~~~~---------~~~i~v~d~~~~~~~~~~~~h-~~~v~~l~~s~~~~~l~s~~~dg~ 500 (860)
... ....++++|+|++++++..+ .+.|.++|..+++....+... ......++++|+++.+.++.. .
T Consensus 170 ~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~ 245 (328)
T 3dsm_A 170 IGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D 245 (328)
T ss_dssp CSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S
T ss_pred cCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E
Confidence 543 34678899999977766554 138999999999888776532 236899999999999888765 8
Q ss_pred EEEEEccCCcceeEE-cc-cCCCeEEEEEeeC-CCEEEEE----eCCCeEEEEeCCCCceeEEEeccc
Q 038577 501 VRLWNVFEGKGSVES-FP-HTHDVLTVVYRPD-GRQLACS----TLDGQIHFWDPLNGELMYTIEGRR 561 (860)
Q Consensus 501 i~iwd~~~~~~~~~~-~~-~~~~v~~~~~s~~-~~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~~ 561 (860)
|.+||..+++..... .. .......++++|+ +++.++. ..++.|.+||.. ++.+.++....
T Consensus 246 v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~ 312 (328)
T 3dsm_A 246 IWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGI 312 (328)
T ss_dssp EEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEE
T ss_pred EEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEecc
Confidence 999999887643211 12 2467889999994 5555555 568899999998 99988887544
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.72 E-value=4.8e-15 Score=150.24 Aligned_cols=284 Identities=12% Similarity=0.030 Sum_probs=203.7
Q ss_pred EEecCCCCEEEEEEc-----CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEc---------cCCcEEEEE
Q 038577 270 CDYHRGLDMVVVGFS-----NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCA---------KLGQLLVWE 335 (860)
Q Consensus 270 ~~~~~~~~~l~~~~~-----~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------~~g~i~v~d 335 (860)
....|+++.+++... ++.|.++|..+++.+..+.....+ . ++++|||++++++.. .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345689999888876 589999999999999999887776 4 999999999988763 347899999
Q ss_pred ccCceEEEEecCc-------ccCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEE
Q 038577 336 WRSESYILKQQGH-------YFDVNCLAYSPDSQLLATGAD--DNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSL 406 (860)
Q Consensus 336 ~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 406 (860)
..+.+.+..+... ......++++|||++++++.. ++.|.++|+.+++.+.++.... . ...+....+.+
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~ 192 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTF 192 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCcee
Confidence 9999988876422 124567999999999988864 6899999999999998885422 1 22233345677
Q ss_pred EEEeCCCcEEEEEccc-cceeeEee---CCCCCcE-EEEEE-CCCCCEEEEEecCCCeEEEEECCCCce--EEEec----
Q 038577 407 LSASLDGTVRAWDLFR-YRNFRTFT---TPSSRQF-VSLAS-DQSGEVICAGTLDSFEIFVWSMKTGRL--LDILS---- 474 (860)
Q Consensus 407 ~s~~~dg~i~~wd~~~-~~~~~~~~---~~~~~~~-~~~~~-~~~~~~l~~~~~~~~~i~v~d~~~~~~--~~~~~---- 474 (860)
++.+.||.+.+.++.+ ++...... ......+ ....| .++|+++++ +.++ .++++|+.++.. ...+.
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v-s~~g-~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP-TYTG-KIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE-BTTS-EEEEEECTTSSCEECCCEESSCH
T ss_pred EEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE-eCCC-EEEEEECCCCcceeecceecccc
Confidence 7888899999998876 44322111 1111111 12344 467766554 4455 999999976642 22221
Q ss_pred -----C-cccCeEEEEEcCCCCEEEEEeC----------CCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCC-EEEEE
Q 038577 475 -----G-HEGPVHGLVFSPTNATLASSSW----------DKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGR-QLACS 537 (860)
Q Consensus 475 -----~-h~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~ 537 (860)
+ ..+....++++|+++.++.... .+.|.+.|+.+.+.+..+. -...+.++++++|++ +|+++
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~-vg~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECSSSSCEEEEE
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE-CCCCcceEEECCCCCeEEEEE
Confidence 0 1233445788999988877643 2579999999998555443 334788999999997 67765
Q ss_pred e-CCCeEEEEeCCCCceeEEEeccc
Q 038577 538 T-LDGQIHFWDPLNGELMYTIEGRR 561 (860)
Q Consensus 538 ~-~dg~i~iwd~~~~~~~~~~~~~~ 561 (860)
. .++.|.++|..+++.+.+++...
T Consensus 350 n~~~~~VsViD~~t~k~~~~i~~~~ 374 (386)
T 3sjl_D 350 STGDKTLYIHDAESGEELRSVNQLG 374 (386)
T ss_dssp ETTTTEEEEEETTTCCEEEEECCCC
T ss_pred cCCCCeEEEEECCCCcEEEEecCCC
Confidence 4 48999999999999999987654
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.72 E-value=2.9e-14 Score=147.68 Aligned_cols=275 Identities=10% Similarity=0.009 Sum_probs=196.0
Q ss_pred EeeCCCEEEEEEc-cCC---cEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEe----------CCCcEEEEECC
Q 038577 314 FNELGNWLVFGCA-KLG---QLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGA----------DDNKVKVWTVS 379 (860)
Q Consensus 314 ~s~~~~~l~~~~~-~~g---~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iwd~~ 379 (860)
..|+++++++... ... .|.++|..+++.+..+.....+ .++++|||++++++. .++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3467776666653 223 7899999999988877654443 899999999999886 36789999999
Q ss_pred CCeeEEEeecC-------CCceEEEEEeeCCCEEEEEeC--CCcEEEEEccccceeeE-eeCCCCCcEEEEEECCCCC-E
Q 038577 380 SGFCFVTFTEH-------TNAVTALHFMANNHSLLSASL--DGTVRAWDLFRYRNFRT-FTTPSSRQFVSLASDQSGE-V 448 (860)
Q Consensus 380 ~~~~~~~~~~~-------~~~v~~i~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 448 (860)
+.+.+..+... ......+.++|||++|+++.. ++.|.++| .+++.... +..+. ++.+.|++. .
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-----~~~~~~~~~~~ 179 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-----CYHIHPGAPST 179 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----eEEEEeCCCce
Confidence 88887766432 234568999999999998874 47899999 99988777 65443 234455554 3
Q ss_pred EEEEecCCCeEEEEECCCCceEEEec-----CcccC-eEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce-eEEcc----
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILS-----GHEGP-VHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS-VESFP---- 517 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~-----~h~~~-v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~---- 517 (860)
+++.+.++ .+.++|. +++...... ....+ .....+.+++..++..+.++.+.+.|+...... .....
T Consensus 180 ~~~~~~dg-~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~ 257 (373)
T 2mad_H 180 FYLLCAQG-GLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG 257 (373)
T ss_pred EEEEcCCC-CEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence 34444555 8999999 877663322 11122 233456777666555557889999998765321 11110
Q ss_pred -------cCCCeEEEEEeeCCCEEEEEeC----------CCeEEEEeCCCCceeEEEecccccCCCccccccccccccCC
Q 038577 518 -------HTHDVLTVVYRPDGRQLACSTL----------DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSS 580 (860)
Q Consensus 518 -------~~~~v~~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (860)
.......++++||++.++++.. ++.|.++|+.+++.+..+.....
T Consensus 258 ~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~------------------ 319 (373)
T 2mad_H 258 GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHD------------------ 319 (373)
T ss_pred cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCC------------------
Confidence 1233455889999998888753 35799999999999998865442
Q ss_pred CCcEEEEEEecCCC-EEEEec-CCCeEEEEECCCceEEEEE
Q 038577 581 GKCFTTLCYSADGS-YILAGG-SSKYICMYDVADQVLLRRF 619 (860)
Q Consensus 581 ~~~i~~l~~s~~g~-~l~~~~-~dg~v~vwd~~~~~~~~~~ 619 (860)
..+++|+|||+ +++++. .++.|.+||+.+++.++.+
T Consensus 320 ---p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 320 ---VDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ---cCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 68999999999 777776 5899999999999998763
No 190
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=2e-14 Score=144.87 Aligned_cols=242 Identities=10% Similarity=0.152 Sum_probs=180.4
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEee------cCceeEEEEEe-eCCCEEEEEEccCCcEEEE
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSI------SREKITTAVFN-ELGNWLVFGCAKLGQLLVW 334 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~------~~~~i~~~~~s-~~~~~l~~~~~~~g~i~v~ 334 (860)
++-..+.+++++++++++++...++.|.+|+.. ++....+.. +...+..+++. +++..+++....++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 444678999999999988888889999999986 565555542 22467889995 5555554443325899999
Q ss_pred EccCceEEEEec-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEee--cCCCceEEEEEeeCCCEEEEEeC
Q 038577 335 EWRSESYILKQQ-GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFT--EHTNAVTALHFMANNHSLLSASL 411 (860)
Q Consensus 335 d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~ 411 (860)
| .+++.+..+. .+...+.+++++|+|+++++...++.|.+|+.. +..+..+. .+...+.+++++++++.+++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 5566665553 344568999999999988887778999999964 55555554 34567899999999987777778
Q ss_pred CCcEEEEEccccceeeEeeCCC-CCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCccc--CeEEEEEcCC
Q 038577 412 DGTVRAWDLFRYRNFRTFTTPS-SRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEG--PVHGLVFSPT 488 (860)
Q Consensus 412 dg~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~--~v~~l~~s~~ 488 (860)
++.|.+||. +++.+..+.... ...+..++++++|+++++...+++.|.+||. +++.+..+..+.. .+.+++++|+
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 261 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDD 261 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETT
T ss_pred CCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCC
Confidence 899999997 445555554332 2467899999999877776655338999995 5677776655433 4789999999
Q ss_pred CCEEEEEeCCCcEEEEEccCC
Q 038577 489 NATLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 489 ~~~l~s~~~dg~i~iwd~~~~ 509 (860)
|+++++ +.|+.|++|++...
T Consensus 262 g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 262 GSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TEEEEE-ETTTEEEEEECSCC
T ss_pred CcEEEE-CCCCeEEEEEcccc
Confidence 987777 67999999998654
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=1.3e-13 Score=140.00 Aligned_cols=281 Identities=5% Similarity=-0.038 Sum_probs=197.8
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEE-eecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLL-SISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES 340 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~ 340 (860)
.....+.+++++++|+.+++...++.|..|+.. ++..... ......+..++++++|...++. ..++.|..|+.....
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~-~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTE-NAANKIGRITKKGII 89 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEE-TTTTEEEEECTTSCE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeC-CCCCeEEEECCCCcE
Confidence 344578999999999977766668999999987 4433221 2234678899999999866654 334889999986332
Q ss_pred EEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE-eecCCCceEEEEEeeCCCEEEEEeCCCcEEEEE
Q 038577 341 YILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVT-FTEHTNAVTALHFMANNHSLLSASLDGTVRAWD 419 (860)
Q Consensus 341 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd 419 (860)
...........+.++++.++|..+++...++.|..||. ++..... ...+...+.++++.++++.+++...++.|..||
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 22222234557899999999988887777889999998 5544332 233456789999999998777776778999999
Q ss_pred ccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEE-ecCcccCeEEEEEcCCCCEEEEEeCC
Q 038577 420 LFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDI-LSGHEGPVHGLVFSPTNATLASSSWD 498 (860)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~s~~~~~l~s~~~d 498 (860)
. +++............+..++++++|.+.++...++ .|.+||. +++.... ...+...+.+++++++|+++++...+
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGN-KIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTT-EEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred C-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCc-eEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 8 55544321222344678999999999666555455 8999999 6665432 33355678999999999977766677
Q ss_pred CcEEEEEccCCcceeEE--cccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCc
Q 038577 499 KTVRLWNVFEGKGSVES--FPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGE 552 (860)
Q Consensus 499 g~i~iwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~ 552 (860)
+.|..||. ++. .... ..+...+.++++ ++|++.++.. .+.+..++..+++
T Consensus 246 ~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 246 NKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp TEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred ceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 89999998 443 2222 234567899999 8888766655 5678888876653
No 192
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=4.4e-15 Score=153.56 Aligned_cols=268 Identities=10% Similarity=0.013 Sum_probs=189.3
Q ss_pred ceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe
Q 038577 266 KVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ 345 (860)
Q Consensus 266 ~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~ 345 (860)
.+.+++|++++..++....++.++.| .++....+..+...+.+++|+++|+.+++. ..++.|.+||..+++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLD-VFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEE
T ss_pred ccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEE-CCCCEEEEEeCCCCcEEEEe
Confidence 46677788888777766777888888 345556666666678999999999854444 44589999999888766544
Q ss_pred cCcccCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeeEEEee--cCCCceEEEEEeeCCCEEEEEeC------CC
Q 038577 346 QGHYFDVNCLAYSPDSQLLATGADD----NKVKVWTVSSGFCFVTFT--EHTNAVTALHFMANNHSLLSASL------DG 413 (860)
Q Consensus 346 ~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~------dg 413 (860)
..+...+.+++++|+|+++++...+ +.|.+||..++.....+. .+...+.+++++|+++.+++... .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 4566779999999999988877666 689999988776653332 24567899999999987776653 24
Q ss_pred cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCC-CceEEE--------ecCcccCeEEEE
Q 038577 414 TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKT-GRLLDI--------LSGHEGPVHGLV 484 (860)
Q Consensus 414 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~-~~~~~~--------~~~h~~~v~~l~ 484 (860)
.|..++..+++...... ....+..++++|+|+.++++....+.|++||+.+ +..... +.++ ..+..++
T Consensus 163 ~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~ 239 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQ--NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC 239 (333)
T ss_dssp EEEEECTTSCCEEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred eEEEEeCCCCEEEEeec--CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence 56666655444332221 1224678999999997766654333899999963 433221 1222 4678899
Q ss_pred EcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCC------CeEEEEEeeCCCEEEEEeCCC
Q 038577 485 FSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTH------DVLTVVYRPDGRQLACSTLDG 541 (860)
Q Consensus 485 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~dg 541 (860)
++++|+++++...++.|.+||.. ++....+..+.. .+.+++|+||++.|++++.++
T Consensus 240 ~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 240 IDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 99999988888888999999984 443444333322 588999999988777666553
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=1.3e-13 Score=140.00 Aligned_cols=281 Identities=9% Similarity=-0.028 Sum_probs=197.7
Q ss_pred cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe-cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee
Q 038577 305 SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ-QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFC 383 (860)
Q Consensus 305 ~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 383 (860)
....+.++++.++|+..++. ..++.|.+||.. +...... ..+...+.+++++++|...++...++.|..|+.. +..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~-~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQ-HKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEE-TTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cCCCccceEECCCCCEEEEe-cCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE
Confidence 34578999999999866544 434889999988 5443322 3345678999999999988877778899999976 332
Q ss_pred -EEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEE
Q 038577 384 -FVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVW 462 (860)
Q Consensus 384 -~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~ 462 (860)
...+......+.++++.++++.+++...++.|..||. +++............+..++++++|+++++...++ .|..|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~ 167 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNN-AIGRI 167 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT-EEEEE
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCC-EEEEE
Confidence 2222234567899999999988877777889999998 54443322222344678999999998777665555 89999
Q ss_pred ECCCCceEEE-ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeE-EcccCCCeEEEEEeeCCCEEEEEeCC
Q 038577 463 SMKTGRLLDI-LSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVE-SFPHTHDVLTVVYRPDGRQLACSTLD 540 (860)
Q Consensus 463 d~~~~~~~~~-~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d 540 (860)
|. +++.... +..+...+.+++++++|.+.++...++.|.+||. +++.... ...+...+.+++++++|+++++...+
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred cC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 98 6766543 3344567889999999997777767889999998 6553222 12345678999999999966666578
Q ss_pred CeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCce
Q 038577 541 GQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 541 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~ 614 (860)
+.|..||. +++. ..+..... ...+.++++ ++|++.++.. .+.+..++..+++
T Consensus 246 ~~i~~~d~-~g~~-~~~~~~~~------------------~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 246 NKIGRLTS-NNII-EEYPIQIK------------------SAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp TEEEEEET-TTEE-EEEECSSS------------------SCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred ceEEEECC-CCce-EEEeCCCC------------------CCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 89999998 4542 23321110 124889999 9998777765 5667777776653
No 194
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=8.6e-15 Score=148.30 Aligned_cols=241 Identities=11% Similarity=0.095 Sum_probs=177.3
Q ss_pred ecCcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc
Q 038577 345 QQGHYFDVNCLAYSPDSQ-LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY 423 (860)
Q Consensus 345 ~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~ 423 (860)
+..+.....+++|+|+|+ .++++..++.|..|+..++ ...+..+...+.+++++++++.+++...++.|.+||..++
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 334555678999999998 7788888999999999877 5666677888999999999998877777789999999777
Q ss_pred ceeeEeeCCC---CCcEEEEEECCCCCEEEEE----ec------------CCCeEEEEECCCCceEEEecCcccCeEEEE
Q 038577 424 RNFRTFTTPS---SRQFVSLASDQSGEVICAG----TL------------DSFEIFVWSMKTGRLLDILSGHEGPVHGLV 484 (860)
Q Consensus 424 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~----~~------------~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~ 484 (860)
+......... ...+..++++|+|+++++. .. ..+.|+.++.. ++. ..+..+......++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKPNGLA 178 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSEEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCCccEE
Confidence 6543322111 1234678999999988863 21 12267777766 554 34445667789999
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcc-CCcc---eeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecc
Q 038577 485 FSPTNATLASSSWDKTVRLWNVF-EGKG---SVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGR 560 (860)
Q Consensus 485 ~s~~~~~l~s~~~dg~i~iwd~~-~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 560 (860)
|+|+++.+++.+.++.|++|++. ++.. ...+..+...+..++++++|+++++. ++.|.+||.. ++.+..+..+
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~ 255 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTP 255 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECS
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECC
Confidence 99999999777778999999997 4432 11222344556789999999866665 7889999986 7777777654
Q ss_pred cccCCCccccccccccccCCCCcEEEEEE-ecCCCEEEEecCCCeEEEEECCCce
Q 038577 561 RDISGGRLMTDRRSAANSSSGKCFTTLCY-SADGSYILAGGSSKYICMYDVADQV 614 (860)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-s~~g~~l~~~~~dg~v~vwd~~~~~ 614 (860)
.. +++++| +|+++.|++++.++ +.-++..++.
T Consensus 256 ~~---------------------~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 256 QT---------------------TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp SC---------------------CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred CC---------------------ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 42 688899 58999998887764 5556666554
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.69 E-value=2e-14 Score=142.35 Aligned_cols=244 Identities=10% Similarity=0.040 Sum_probs=191.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeecCC-CceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEE
Q 038577 360 DSQLLATGADDNKVKVWTVSSGFCFVTFTEHT-NAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFV 438 (860)
Q Consensus 360 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~ 438 (860)
.++.|++++.++.|.+||.++++.+..+..+. ..+.++.++|+|+.++ +.++.|..||. +++.+..+..+....+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 45789999999999999999999999998776 4789999999999888 45778999999 89999988876556788
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce
Q 038577 439 SLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS 512 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 512 (860)
++.+.++|+++++.+.+.+.+..+|. +|+.+..+. .+......+++.++|+++++...++.|..||.. ++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 89999999999998873338888886 688776664 222345667889999999999999999999987 8766
Q ss_pred eEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecC
Q 038577 513 VESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSAD 592 (860)
Q Consensus 513 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~ 592 (860)
...... ..+.++...++|++++++..++.|..+|..+|+.+.++...... +. .-..+..++..++
T Consensus 159 w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~-~~-------------~l~~~~~~~~~~~ 223 (276)
T 3no2_A 159 NSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE-GV-------------QLFFVAQLFPLQN 223 (276)
T ss_dssp EEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB-SC-------------CCSEEEEEEECTT
T ss_pred EEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC-Cc-------------cccccccceEcCC
Confidence 655443 45567788899999999988889999999999999998754310 00 0123789999999
Q ss_pred CCEEEEec--CC------CeEEEEEC-CCceEEEEEeecc
Q 038577 593 GSYILAGG--SS------KYICMYDV-ADQVLLRRFQITH 623 (860)
Q Consensus 593 g~~l~~~~--~d------g~v~vwd~-~~~~~~~~~~~~~ 623 (860)
|..+++.. .. +..+++++ .+|+.+.++....
T Consensus 224 G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~ 263 (276)
T 3no2_A 224 GGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKV 263 (276)
T ss_dssp SCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCTT
T ss_pred CCEEEEeccCccccccccCCceEEEECCCCCEEEEecCcc
Confidence 99988873 21 24466666 5788877765443
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.69 E-value=1.9e-13 Score=141.64 Aligned_cols=276 Identities=11% Similarity=-0.003 Sum_probs=196.1
Q ss_pred ecCCCCEEEEEEc--CC---eEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEc---------cCCcEEEEEcc
Q 038577 272 YHRGLDMVVVGFS--NG---VFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCA---------KLGQLLVWEWR 337 (860)
Q Consensus 272 ~~~~~~~l~~~~~--~g---~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------~~g~i~v~d~~ 337 (860)
..|+++++++... .+ .|.++|..+++.+..+.....+ .++++|||++++++.. .++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3467777776654 23 8899999999988887766544 9999999999999863 34789999999
Q ss_pred CceEEEEecCc-------ccCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEE-eecCCCceEEEEEeeCC-CEE
Q 038577 338 SESYILKQQGH-------YFDVNCLAYSPDSQLLATGAD--DNKVKVWTVSSGFCFVT-FTEHTNAVTALHFMANN-HSL 406 (860)
Q Consensus 338 ~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~-~~l 406 (860)
+.+.+..+... ......++++|||++|+++.. ++.|.++| .+++.+.. +... . ++.+.|++ +.+
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~ 180 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTF 180 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceE
Confidence 88777665322 123558999999999998874 47899999 99988877 5422 2 24455655 456
Q ss_pred EEEeCCCcEEEEEccccceeeEee-----CCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc--eEEEecC----
Q 038577 407 LSASLDGTVRAWDLFRYRNFRTFT-----TPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR--LLDILSG---- 475 (860)
Q Consensus 407 ~s~~~dg~i~~wd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~--~~~~~~~---- 475 (860)
++.+.||.+.++|. +++...... ...........+.+++..++..+..+ .+.+.|+.++. .+..+.-
T Consensus 181 ~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~v~vid~~~~~~~v~~~~~~~~~~ 258 (373)
T 2mad_H 181 YLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSG-KILQADISAAGATNKAPIDALSGG 258 (373)
T ss_pred EEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCc-eEEEEeccCCcceEeeeeeecCCc
Confidence 67788999999999 776653322 11111122345566666555555555 89999997653 2222211
Q ss_pred ------cccCeEEEEEcCCCCEEEEEeC----------CCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCC-EEEEEe
Q 038577 476 ------HEGPVHGLVFSPTNATLASSSW----------DKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGR-QLACST 538 (860)
Q Consensus 476 ------h~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~ 538 (860)
.......++++|+++.+..+.. .+.|.++|..+.+....+ ........++|+|||+ +++++.
T Consensus 259 ~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 259 RKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred ccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEc
Confidence 1122445789999988777653 357999999998855555 4445689999999999 777776
Q ss_pred -CCCeEEEEeCCCCceeEEE
Q 038577 539 -LDGQIHFWDPLNGELMYTI 557 (860)
Q Consensus 539 -~dg~i~iwd~~~~~~~~~~ 557 (860)
.++.|.+||+.+++.+..+
T Consensus 338 ~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 338 AGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCeEEEEECCCCCEEeee
Confidence 5899999999999998874
No 197
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=3.8e-10 Score=130.71 Aligned_cols=523 Identities=9% Similarity=0.037 Sum_probs=312.6
Q ss_pred CCCEEEeeeCCeEEEEECCCCcEEeeccC-------CccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEe-e--
Q 038577 22 QNTKLISPVGNRVSVTDLIKSKTVTLPVE-------SSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRV-R-- 91 (860)
Q Consensus 22 dg~~l~~~~~~~i~v~d~~~~~~~~~~~~-------h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~-~-- 91 (860)
+| +|=.|..+-+..||-.+-+....... ....|.++...++|..|-.++.++-+..||..+++..... .
T Consensus 29 ~G-~lWigT~~GL~ryDG~~f~~~~~~~~~~~~~~l~~n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~ 107 (781)
T 3v9f_A 29 QG-FLWFATEEGLNKFDGTRFITYYKEEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPE 107 (781)
T ss_dssp TS-CEEEEESSCEEEECSSSEEEECCCSSCSSSCCCSCSCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTT
T ss_pred CC-CEEEccCCcCccccCCceEEEEcCCCCCccccccccccceEEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccC
Confidence 44 55556666688887654222211111 1245899999999983444566657999999887765431 1
Q ss_pred -----cCCceeEEEECC--CCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeec------cCCCeEEEEEcCCCCeEEE
Q 038577 92 -----FKYPVNAILFSP--NGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLAD------CNDKVTALNWSPDSNYLLV 158 (860)
Q Consensus 92 -----~~~~v~~~~fsp--dg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~s~d~~~l~s 158 (860)
....|.++...+ +|.+.+...++.|..||..+++ ...+.. ....|.++...++|.+.+
T Consensus 108 ~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~--------~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi- 178 (781)
T 3v9f_A 108 DPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGK--------FTHYNKSTVPALPSEQTWTATEAEDGKLYI- 178 (781)
T ss_dssp CSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETTTTE--------EEEESTTTCTTCSCCCEEEEEEEETTEEEE-
T ss_pred CCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECCCCe--------EEeeccCcccCCCccceEEEEECCCCCEEE-
Confidence 123588898888 7766554436778899987654 222221 134588888877776544
Q ss_pred eecCCeEEEEeecccccCccccc-ceE-eecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCC
Q 038577 159 GSKDLAVRLFYVKEKLKGIHTNK-PFL-LLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMED 236 (860)
Q Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~-~~~-~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~ 236 (860)
++.++-+..||..+. +...... ... ..-....|.++...+++. |..++.+ -+..|+..++..
T Consensus 179 gt~~~Gl~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~------lwigt~~-Gl~~~d~~~~~~-------- 242 (781)
T 3v9f_A 179 GHVEGGLSILSLNDK-SVKHFVHDPQNPNSLPGNDVRCIYKDTNGN------IWIGTSK-GLALFNANTETF-------- 242 (781)
T ss_dssp EETTTEEEEEETTTT-EEEEECC--------CCSSEEEEEECTTCC------EEEEETT-EEEEEETTTTEE--------
T ss_pred EecCCCeEEEcCCCC-ceEeeecCCCCcccCCCCceeEEEEcCCCC------EEEEeCC-cHheECCCCCcE--------
Confidence 555656888887654 1100000 000 001235688888887775 5555555 578888665321
Q ss_pred CCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEe-------------
Q 038577 237 SEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLS------------- 303 (860)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~------------- 303 (860)
..+..............|.++...++|. +.+|+..+-+.+++..+........
T Consensus 243 -------------~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 308 (781)
T 3v9f_A 243 -------------TNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNY 308 (781)
T ss_dssp -------------EC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTT
T ss_pred -------------EEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCC
Confidence 0110000000011345689998888776 5567775567888887655332211
Q ss_pred -ecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec---------CcccCeEEEEEcCCCCEEEEEeCCCcE
Q 038577 304 -ISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ---------GHYFDVNCLAYSPDSQLLATGADDNKV 373 (860)
Q Consensus 304 -~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~dg~i 373 (860)
.....|.++...++|..- +++.. +-|..++..++....... .....|.++...++|. |..|+.++-+
T Consensus 309 ~l~~~~v~~i~~D~~g~lW-igt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl 385 (781)
T 3v9f_A 309 SLSNASARYIFQDSFNNIW-IGTWG-GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGI 385 (781)
T ss_dssp SBSSSCEEEEEECSSCCEE-EEEBS-SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCE
T ss_pred CCCCCeEEEEEEeCCCCEE-EEecC-CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcE
Confidence 123568888888888644 44433 678888877654332211 1235689999888876 4556666678
Q ss_pred EEEECCCCeeEEEe---ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeC--CCCCcEEEEEECCCCCE
Q 038577 374 KVWTVSSGFCFVTF---TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTT--PSSRQFVSLASDQSGEV 448 (860)
Q Consensus 374 ~iwd~~~~~~~~~~---~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 448 (860)
..|+..++...... ......|.++...+++. |..|+.++.+..++..+++.. .+.. .....+.++..+++|.+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEE
T ss_pred EEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCE
Confidence 99997654322111 12346788988877775 555777677888988665433 2221 23456888988888875
Q ss_pred EEEEecCCCeEEEEECCCCceEEEecCc-----ccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc----cC
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILSGH-----EGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP----HT 519 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~~h-----~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~ 519 (860)
.+ ++. + .+..||..+++........ ...|.++...++|.+.+. +.++-+..||..+.+ ...... ..
T Consensus 464 wi-gt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~-~~~~~~~~~l~~ 538 (781)
T 3v9f_A 464 WI-GTH-A-GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQL-VRKFNQYEGFCS 538 (781)
T ss_dssp EE-EET-T-EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCE-EEEECTTTTCSC
T ss_pred EE-EEC-C-ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCe-EEEccCCCCCCC
Confidence 55 444 3 5999999887665433222 467999999988876554 443347778876654 222221 24
Q ss_pred CCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEe
Q 038577 520 HDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAG 599 (860)
Q Consensus 520 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~ 599 (860)
..|.++...++|.+.++. .+|.+..||..+++. ..+...... ....|.++..+++|++.+++
T Consensus 539 ~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~-~~~~~~~gl----------------~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 539 NTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY-QVFQRKEGL----------------PNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp SCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC-EEECGGGTC----------------SCCCCCEEEECSSSCEEEEC
T ss_pred CeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE-EEccccCCC----------------CCceEEEEEECCCCCEEEEc
Confidence 568999998888865544 467558999877653 223222211 12247889999999876654
Q ss_pred cCCCeEEEEECCCce
Q 038577 600 GSSKYICMYDVADQV 614 (860)
Q Consensus 600 ~~dg~v~vwd~~~~~ 614 (860)
..| |..|+..+++
T Consensus 601 -~~G-l~~~~~~~~~ 613 (781)
T 3v9f_A 601 -NTG-ISCYITSKKC 613 (781)
T ss_dssp -SSC-EEEEETTTTE
T ss_pred -CCc-eEEEECCCCc
Confidence 455 7788887664
No 198
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=2.5e-14 Score=144.83 Aligned_cols=243 Identities=12% Similarity=0.075 Sum_probs=174.3
Q ss_pred EEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 038577 300 HLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS 379 (860)
Q Consensus 300 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 379 (860)
..+........+++|+|+|+.++.+...++.|..|+..++ ...+..+...+.+++++|+|+++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 3344445567899999999966666666699999999887 45555667779999999999988877777899999998
Q ss_pred CCeeEEEeecC----CCceEEEEEeeCCCEEEEEeC-----------------CCcEEEEEccccceeeEeeCCCCCcEE
Q 038577 380 SGFCFVTFTEH----TNAVTALHFMANNHSLLSASL-----------------DGTVRAWDLFRYRNFRTFTTPSSRQFV 438 (860)
Q Consensus 380 ~~~~~~~~~~~----~~~v~~i~~~~~~~~l~s~~~-----------------dg~i~~wd~~~~~~~~~~~~~~~~~~~ 438 (860)
+++........ ...+.+++++|+|+.+++.+. .+.|..++.. ++ ...+. .......
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~-~~~~~~~ 175 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPI-RDRVKPN 175 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEE-CCCSSEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEee-cCCCCCc
Confidence 88765443221 234678999999988887321 2355555544 33 33332 2334568
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEECC-CCce---EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeE
Q 038577 439 SLASDQSGEVICAGTLDSFEIFVWSMK-TGRL---LDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVE 514 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~~~i~v~d~~-~~~~---~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 514 (860)
.++++|+|+.+++...++ .|++|++. +++. ...+..+.+.+.+++++++|+++++. ++.|.+||.. ++....
T Consensus 176 gi~~s~dg~~lv~~~~~~-~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDN-ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp EEEECTTSCEEEEETTTT-EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred cEEECCCCCEEEEeCCCC-eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE
Confidence 899999999994444455 99999987 5655 33444455667889999999877666 7889999986 554555
Q ss_pred EcccCCCeEEEEE-eeCCCEEEEEeCCCeEEEEeCCCCce
Q 038577 515 SFPHTHDVLTVVY-RPDGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 515 ~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
+..+.. +++++| +|+++.|++++.+ .+.-++..+.+.
T Consensus 252 ~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 252 VLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp EECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred EECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 555555 899999 5899999998876 466677766654
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.68 E-value=9e-15 Score=151.42 Aligned_cols=275 Identities=13% Similarity=0.101 Sum_probs=199.7
Q ss_pred eCCCEEEEEEccC----CcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEe----------CCCcEEEEECCCC
Q 038577 316 ELGNWLVFGCAKL----GQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGA----------DDNKVKVWTVSSG 381 (860)
Q Consensus 316 ~~~~~l~~~~~~~----g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~ 381 (860)
++++.++++.... +.|.++|..+++.+..+..-..+ .++++|||++++++. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 5777777777654 69999999999999888655555 899999999888876 3678999999999
Q ss_pred eeEEEeecC-------CCceEEEEEeeCCCEEEEEeC--CCcEEEEEccccceeeEeeCCCCCcEEEEEECCCC-CEEEE
Q 038577 382 FCFVTFTEH-------TNAVTALHFMANNHSLLSASL--DGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSG-EVICA 451 (860)
Q Consensus 382 ~~~~~~~~~-------~~~v~~i~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 451 (860)
+.+..+.-. ......+.++|||++++++.. ++.|.+.|+.+.+.+..+..+.. ....|++ +.+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-----~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-----YHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-----eeeccCCCcEEEE
Confidence 998877532 234567899999999998874 57899999999999888886542 1222322 33333
Q ss_pred EecCCCeEEEEECCCCceEEE----ecCcccCe-EEEEEcCCCCEEEEEeCCCcEEEEEccCCccee----EEc-----c
Q 038577 452 GTLDSFEIFVWSMKTGRLLDI----LSGHEGPV-HGLVFSPTNATLASSSWDKTVRLWNVFEGKGSV----ESF-----P 517 (860)
Q Consensus 452 ~~~~~~~i~v~d~~~~~~~~~----~~~h~~~v-~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~-----~ 517 (860)
.+.++ .+.+.+..+++.... +.....++ ..+.+++++..++..+..+.|.+.|........ ... .
T Consensus 235 ~~~dG-~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 235 NCRDG-SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp EETTS-SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGG
T ss_pred EcCCC-CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccc
Confidence 44444 555556655544422 11111221 235689999888888888999999986554211 000 0
Q ss_pred ---cCCCeEEEEEeeCCCEEEEEeC----------CCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcE
Q 038577 518 ---HTHDVLTVVYRPDGRQLACSTL----------DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCF 584 (860)
Q Consensus 518 ---~~~~v~~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 584 (860)
.......++++|+++.++++.. ++.|.++|+.+.+.+..+..... .
T Consensus 314 ~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~---------------------P 372 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE---------------------I 372 (426)
T ss_dssp GTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---------------------E
T ss_pred cccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC---------------------c
Confidence 1122223789999998887743 35799999999999999976553 6
Q ss_pred EEEEEecCCC-EEEEec-CCCeEEEEECCCceEEEEE
Q 038577 585 TTLCYSADGS-YILAGG-SSKYICMYDVADQVLLRRF 619 (860)
Q Consensus 585 ~~l~~s~~g~-~l~~~~-~dg~v~vwd~~~~~~~~~~ 619 (860)
..+.|+|||+ ++++.. .++.|.++|+.+++.++++
T Consensus 373 ~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 373 DSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 8999999999 888877 5899999999999999876
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.66 E-value=7.6e-15 Score=167.68 Aligned_cols=278 Identities=10% Similarity=-0.036 Sum_probs=186.9
Q ss_pred CCCEEEeeeC------CeEEEEECCCCcEEeecc------CCccCeeEEEEcCCCCEEEEE-----cCCCcEEEEEcccC
Q 038577 22 QNTKLISPVG------NRVSVTDLIKSKTVTLPV------ESSSNICRIAVSPDGTFLLTV-----DENQRCHFINLHCH 84 (860)
Q Consensus 22 dg~~l~~~~~------~~i~v~d~~~~~~~~~~~------~h~~~v~~va~spdg~~la~~-----~~d~~i~vwd~~~~ 84 (860)
||+++++... ..|.+.+..+++...++. +|...+..++|||||++||.+ +.+..|++||+.++
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg 157 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG 157 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC
Confidence 8888887642 235666666665544432 455678999999999999954 33468999999999
Q ss_pred eEE-EEeecCCceeEEEECCCCCEEEEE-eCCe-------------EEEEeCCCCCcccceeEEEEEeeccCCCeEEEEE
Q 038577 85 VVL-HRVRFKYPVNAILFSPNGKYIAVG-TGKL-------------VQIWRSPGFKKEVFAFELIRTLADCNDKVTALNW 149 (860)
Q Consensus 85 ~~~-~~~~~~~~v~~~~fspdg~~la~~-~~~~-------------i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 149 (860)
+.+ ...........++|+|||+.|+++ .+.. |++|++.++... ..++.....|...+..+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~---~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 158 EWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK---DTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp CBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG---CEEEECCCCCTTCEEEEEE
T ss_pred CCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh---ceEEEecCCCCEEEEEEEE
Confidence 865 211111122789999999999988 3333 999999887531 1134444456678899999
Q ss_pred cCCCCeEEEeecCC----eEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEc---CCccEEEee
Q 038577 150 SPDSNYLLVGSKDL----AVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA---RDCYMFSWG 222 (860)
Q Consensus 150 s~d~~~l~s~~~dg----~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~---~dg~i~~w~ 222 (860)
||||++|+.++.++ .|.+|+..++ ....+..+...+....+ +++. .++... .++.|.+|+
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~-------~~~~l~~~~~~~~~~~~-~~g~-----l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEK-------DFRLLVKGVGAKYEVHA-WKDR-----FYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCS-------SCEEEEECSSCCEEEEE-ETTE-----EEEEECTTCTTCEEEEEB
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCC-------ceEEeecCCCceEEEEe-cCCc-----EEEEECCCCCCCEEEEEe
Confidence 99999999887665 5666654333 34555666666666666 6664 555554 357899998
Q ss_pred ecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCC-CCceEEEEecCCCCEEEEEEcCCeEEEEECC-CceeEE
Q 038577 223 FSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQA-PSKVTACDYHRGLDMVVVGFSNGVFGLYQMP-DFVCIH 300 (860)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~-~~~~~~ 300 (860)
+.++.. ..|... +..+ ...+..++++ ++.++++...++..++|.+. +++...
T Consensus 302 ~~~~~~---------------------~~~~~l----~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 355 (695)
T 2bkl_A 302 PAKPAR---------------------ASWKEI----VPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVR 355 (695)
T ss_dssp TTBCSG---------------------GGCEEE----ECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEE
T ss_pred CCCCCc---------------------cCCeEE----ecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeE
Confidence 876421 112111 1122 3457778887 67778888889988887654 455566
Q ss_pred EEeec-CceeEEEEEeeCCCEEEEEEcc---CCcEEEEEccCceE
Q 038577 301 LLSIS-REKITTAVFNELGNWLVFGCAK---LGQLLVWEWRSESY 341 (860)
Q Consensus 301 ~~~~~-~~~i~~~~~s~~~~~l~~~~~~---~g~i~v~d~~~~~~ 341 (860)
.+..+ ...+..+.++|+++.+++.... .+.+++||+.+++.
T Consensus 356 ~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 356 TVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 66554 5677888899999888766543 36799999887653
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=2e-14 Score=143.47 Aligned_cols=242 Identities=8% Similarity=-0.037 Sum_probs=172.7
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEe
Q 038577 351 DVNCLAYSPDSQLLA-TGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTF 429 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~ 429 (860)
...+++++++|+.++ +...++.|.+|+..+.........+...+.+++++++++.+++.. ++.|.+||...... ..+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eee
Confidence 678999999998776 446788999999765543322223445788999999998666555 88999999865443 333
Q ss_pred eCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q 038577 430 TTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 509 (860)
.......+..++++++|+++++...++ .|.+|+..+.............+.+++++++|+++++...++.|.+||....
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNN-RVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGT-EEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCC-EEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 333335678999999999666655555 8999987665544333333456789999999997777777889999998776
Q ss_pred cceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEE
Q 038577 510 KGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCY 589 (860)
Q Consensus 510 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 589 (860)
........+...+..++++++|.++++...++.|.+|+............+ ...+.++++
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~--------------------~~~p~~i~~ 241 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG--------------------LNTPLAVAV 241 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCS--------------------CSCEEEEEE
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCC--------------------CCCceeEEE
Confidence 533322334467899999999987777777889999998665432211111 124899999
Q ss_pred ecCCCEEEEecCCCeEEEEECCCceE
Q 038577 590 SADGSYILAGGSSKYICMYDVADQVL 615 (860)
Q Consensus 590 s~~g~~l~~~~~dg~v~vwd~~~~~~ 615 (860)
+++|+.+++...++.|+++++...+.
T Consensus 242 ~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 242 DSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred CCCCCEEEEECCCCEEEEEcCCCccc
Confidence 99999888888999999999987653
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=3e-14 Score=162.73 Aligned_cols=274 Identities=12% Similarity=-0.052 Sum_probs=186.4
Q ss_pred cCCCCEEEEEEcCC-----eEEEEECCCceeEEEEee------cCceeEEEEEeeCCCEEEEEEccC----CcEEEEEcc
Q 038577 273 HRGLDMVVVGFSNG-----VFGLYQMPDFVCIHLLSI------SREKITTAVFNELGNWLVFGCAKL----GQLLVWEWR 337 (860)
Q Consensus 273 ~~~~~~l~~~~~~g-----~i~~~~~~~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~~~----g~i~v~d~~ 337 (860)
.|+|++++....++ .+.+.+...++....+.. +...+..++|||||+.++++.... ..|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 37888888766543 355555545544333332 233688999999999999877654 479999999
Q ss_pred CceEEEEecCcccCe--EEEEEcCCCCEEEEEeCCCc-------------EEEEECCCCe----eEEEeecCCCceEEEE
Q 038577 338 SESYILKQQGHYFDV--NCLAYSPDSQLLATGADDNK-------------VKVWTVSSGF----CFVTFTEHTNAVTALH 398 (860)
Q Consensus 338 ~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~dg~-------------i~iwd~~~~~----~~~~~~~~~~~v~~i~ 398 (860)
+++.+. ..+...+ ..++|+|||+.|+.++.+.. |++|++.++. .+.....|...+.++.
T Consensus 156 tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 156 SGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 987641 1122222 67899999999999988776 9999998775 3333344556789999
Q ss_pred EeeCCCEEEEEeCCC----cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEec-C--CCeEEEEECCCCce--
Q 038577 399 FMANNHSLLSASLDG----TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTL-D--SFEIFVWSMKTGRL-- 469 (860)
Q Consensus 399 ~~~~~~~l~s~~~dg----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~--~~~i~v~d~~~~~~-- 469 (860)
|+|||++|+.++.++ .|.+|+..++. .+.+..... ......+ ++|. +++.+. + .+.|++||+.+++.
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~-~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVG-AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSS-CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCC-ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC
Confidence 999999998877665 67777655443 333433332 2333444 5666 554443 2 34899999988763
Q ss_pred -EEEecCc-ccCeEEEEEcCCCCEEEEEeCCCcEEEEEcc-CCcceeEEccc-CCCeEEEEEeeCCCEEEEEe----CCC
Q 038577 470 -LDILSGH-EGPVHGLVFSPTNATLASSSWDKTVRLWNVF-EGKGSVESFPH-THDVLTVVYRPDGRQLACST----LDG 541 (860)
Q Consensus 470 -~~~~~~h-~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~----~dg 541 (860)
...+..+ ...+..++++ ++.++++...|+..++|.+. ++.....+..+ ...+..++++|++..++... ..+
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 388 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPR 388 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 4444433 4568888998 77788899999998888765 34433333333 56678888999998776443 346
Q ss_pred eEEEEeCCCCce
Q 038577 542 QIHFWDPLNGEL 553 (860)
Q Consensus 542 ~i~iwd~~~~~~ 553 (860)
+|++||+.+++.
T Consensus 389 ~v~~~d~~~g~~ 400 (695)
T 2bkl_A 389 QIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEETTTCCE
T ss_pred EEEEEECCCCcE
Confidence 899999998874
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.65 E-value=8.3e-14 Score=144.24 Aligned_cols=276 Identities=12% Similarity=0.007 Sum_probs=201.0
Q ss_pred CCCCEEEEEEcC-----CeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEc---------cCCcEEEEEccCc
Q 038577 274 RGLDMVVVGFSN-----GVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCA---------KLGQLLVWEWRSE 339 (860)
Q Consensus 274 ~~~~~l~~~~~~-----g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------~~g~i~v~d~~~~ 339 (860)
++++.+++.... +.|.++|..+++.+..+.....+ .++++|||++++++.. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 566777766653 69999999999999999988776 8999999999998863 3478999999999
Q ss_pred eEEEEecCc-------ccCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEEeecCCCceEEEEEeeCC-CEEEEE
Q 038577 340 SYILKQQGH-------YFDVNCLAYSPDSQLLATGAD--DNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANN-HSLLSA 409 (860)
Q Consensus 340 ~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~ 409 (860)
+.+..+.-. ......++++|||++++++.. ++.|.+.|+.+++.+..+..... ....|++ +.+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEE
Confidence 888776421 123567899999999998874 57899999999999888764221 2334433 566777
Q ss_pred eCCCcEEEEEccccceeeE----eeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEE--EecC--------
Q 038577 410 SLDGTVRAWDLFRYRNFRT----FTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLD--ILSG-------- 475 (860)
Q Consensus 410 ~~dg~i~~wd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~--~~~~-------- 475 (860)
+.||.+.+.+..+++.... +..........+.+++++..++.....+ .+++.|+..+.... .+.-
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g-~V~ViD~~~~~~~v~~~~~~~~~~~i~~ 314 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTG-KIFQADLTAEGATFRAPIEALTEAERAD 314 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTS-EEEEEEECSSCEEECCCEESSCTTTGGG
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCC-cEEEEeccCCceEEeeeeeecccccccc
Confidence 7888888888755544421 2222221223456789998888877766 99999987654321 1110
Q ss_pred --cccCeEEEEEcCCCCEEEEEeC----------CCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCC-EEEEEe-CCC
Q 038577 476 --HEGPVHGLVFSPTNATLASSSW----------DKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGR-QLACST-LDG 541 (860)
Q Consensus 476 --h~~~v~~l~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg 541 (860)
.......++++|+++.+++... ++.|.++|..+.+.+..+. -......++|+|||+ +++++. .++
T Consensus 315 g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~-vg~~P~gia~spDg~~~lyv~n~~s~ 393 (426)
T 3c75_H 315 DWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE-LGHEIDSINVSQDAEPLLYALSAGTQ 393 (426)
T ss_dssp TEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECCSSSCEEEEEETTTT
T ss_pred ccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE-CCCCcCeEEEccCCCEEEEEEcCCCC
Confidence 0112223789999887776542 3579999999998655553 333588999999999 888888 589
Q ss_pred eEEEEeCCCCceeEEE
Q 038577 542 QIHFWDPLNGELMYTI 557 (860)
Q Consensus 542 ~i~iwd~~~~~~~~~~ 557 (860)
.|.++|+.+++.+.++
T Consensus 394 ~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 394 TLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCCEEEEe
Confidence 9999999999999887
No 204
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=4.9e-10 Score=129.79 Aligned_cols=539 Identities=10% Similarity=0.059 Sum_probs=316.4
Q ss_pred EEEe-CCCEEEeeeCC-eEEEEECCCCcEEeeccC-------CccCeeEEEEcC--CCCEEEEEcCCCcEEEEEcccCeE
Q 038577 18 AVLS-QNTKLISPVGN-RVSVTDLIKSKTVTLPVE-------SSSNICRIAVSP--DGTFLLTVDENQRCHFINLHCHVV 86 (860)
Q Consensus 18 ~~~s-dg~~l~~~~~~-~i~v~d~~~~~~~~~~~~-------h~~~v~~va~sp--dg~~la~~~~d~~i~vwd~~~~~~ 86 (860)
+... +|+.|-.+..+ .+..||..+++....... ....|.++...+ +|.+.+ ++.++.+..+|..+++.
T Consensus 71 i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi-~t~~~gl~~~~~~~~~~ 149 (781)
T 3v9f_A 71 VYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWV-CTYYRGIEYLDIATGKF 149 (781)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEE-EESSSCEEEEETTTTEE
T ss_pred EEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEE-EECCCCeeEEECCCCeE
Confidence 4444 56624445554 899999998876554211 123688998888 776544 44345688999887765
Q ss_pred EEEee------cCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEee
Q 038577 87 LHRVR------FKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGS 160 (860)
Q Consensus 87 ~~~~~------~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~ 160 (860)
..... ....|.++...++|.+.+...++.+..||..+++..................|.++...++|.+.+ ++
T Consensus 150 ~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt 228 (781)
T 3v9f_A 150 THYNKSTVPALPSEQTWTATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWI-GT 228 (781)
T ss_dssp EEESTTTCTTCSCCCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEE-EE
T ss_pred EeeccCcccCCCccceEEEEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEE-Ee
Confidence 44321 124578888888887776555557889998776421000000000001235689999988887555 44
Q ss_pred cCCeEEEEeecccccCcccccce--EeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCC
Q 038577 161 KDLAVRLFYVKEKLKGIHTNKPF--LLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSE 238 (860)
Q Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~--~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~ 238 (860)
.+ -+.+||..+. ......... ........|.++...+++ .|..++..+-+.+++..+........
T Consensus 229 ~~-Gl~~~d~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g------~lWigt~~~Gl~~~~~~~~~~~~~~~----- 295 (781)
T 3v9f_A 229 SK-GLALFNANTE-TFTNFHNNPGNIHGALSSYIFSIKQLKDN------KLWIATELNGIMILDLQQNQFLLPEQ----- 295 (781)
T ss_dssp TT-EEEEEETTTT-EEEC-----------CCCCEEEEEECTTS------EEEEEESSSCEEEEETTCC------------
T ss_pred CC-cHheECCCCC-cEEEEEcCCCccccccCceEEEEEECCCC------CEEEEeCCCCeEEECCCCCeeeeeec-----
Confidence 44 5888887654 110000000 001124568888888777 47777775667888876543210000
Q ss_pred CCCCCCCcceeeeEEee--eeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEe---------ecCc
Q 038577 239 PPSPGTPERRVKKWGLL--RKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLS---------ISRE 307 (860)
Q Consensus 239 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~---------~~~~ 307 (860)
..+... ...........|.++...++|. +.+|+.++-|..++........... ....
T Consensus 296 -----------~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 296 -----------IRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 363 (781)
T ss_dssp -------------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSS
T ss_pred -----------cccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCc
Confidence 000000 0000112345689999988886 6677777778888876544332211 1234
Q ss_pred eeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEe---cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 038577 308 KITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQ---QGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCF 384 (860)
Q Consensus 308 ~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 384 (860)
.|.++...++|... +++.. +-|..|+..++...... ......|.++...++|.+. .|+.++.+..++..+++..
T Consensus 364 ~v~~i~~d~~g~lW-igt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 364 VVSSVCDDGQGKLW-IGTDG-GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp CEEEEEECTTSCEE-EEEBS-SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEE
T ss_pred ceEEEEEcCCCCEE-EEeCC-CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEE
Confidence 68888888777654 44433 66888887765433211 1234568899988888654 4666677999998776543
Q ss_pred EEee--cCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCC----CCCcEEEEEECCCCCEEEEEecCCCe
Q 038577 385 VTFT--EHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTP----SSRQFVSLASDQSGEVICAGTLDSFE 458 (860)
Q Consensus 385 ~~~~--~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~ 458 (860)
.... .....|.++...+++. |..++. +.+..||..+++........ ....+.++..+++|.+.+....+ -
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~--G 516 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG--G 516 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS--C
T ss_pred EeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC--C
Confidence 3221 1346788988887775 555555 56888998765543322211 13568899999999876554434 3
Q ss_pred EEEEECCCCceEEEecC---cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc----cCCCeEEEEEeeCC
Q 038577 459 IFVWSMKTGRLLDILSG---HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP----HTHDVLTVVYRPDG 531 (860)
Q Consensus 459 i~v~d~~~~~~~~~~~~---h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~s~~~ 531 (860)
+..||..+++....... ....|.++...++|.+.++. .+|.+..||..+++. ..... ....|.++...++|
T Consensus 517 l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g 594 (781)
T 3v9f_A 517 VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNG 594 (781)
T ss_dssp EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSS
T ss_pred EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCC
Confidence 88899877654432211 23568999998888865544 467558888876652 22221 23457888888888
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECC
Q 038577 532 RQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 532 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~ 611 (860)
++.++ +.+| |..|+..+++. ..+......... .-...++...++|++++ |+.+| +..++..
T Consensus 595 ~lW~~-t~~G-l~~~~~~~~~~-~~~~~~dGl~~~--------------~f~~~~~~~~~~G~l~~-g~~~G-l~~f~p~ 655 (781)
T 3v9f_A 595 NIWAS-TNTG-ISCYITSKKCF-YTYDHSNNIPQG--------------SFISGCVTKDHNGLIYF-GSING-LCFFNPD 655 (781)
T ss_dssp CEEEE-CSSC-EEEEETTTTEE-EEECGGGTCCSS--------------CEEEEEEEECTTSCEEE-EETTE-EEEECSC
T ss_pred CEEEE-cCCc-eEEEECCCCce-EEecccCCcccc--------------ccccCceEECCCCEEEE-ECCCc-eEEEChh
Confidence 76555 4555 78888876543 333322221100 01135677788898666 55667 5556654
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.64 E-value=1.1e-13 Score=137.13 Aligned_cols=235 Identities=11% Similarity=0.138 Sum_probs=183.4
Q ss_pred EEEEEccCCcEEEEEccCceEEEEecCcc-cCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCC-CceEEEE
Q 038577 321 LVFGCAKLGQLLVWEWRSESYILKQQGHY-FDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHT-NAVTALH 398 (860)
Q Consensus 321 l~~~~~~~g~i~v~d~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~i~ 398 (860)
++++++.++.|.+||.++++.+.++..+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. ..+.++.
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 34444556999999999999999987765 4788999999999888 34678999998 899998888653 5788999
Q ss_pred EeeCCCEEEEEeC-CCcEEEEEccccceeeEeeCCCC-----CcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEE
Q 038577 399 FMANNHSLLSASL-DGTVRAWDLFRYRNFRTFTTPSS-----RQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDI 472 (860)
Q Consensus 399 ~~~~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~ 472 (860)
+.++|+.+++.+. ++.+..+|. +++.+..+..... .....+++.++|+++++...++ .|..||.+ |+.+..
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~-~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS-EVREIAPN-GQLLNS 160 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT-EEEEECTT-SCEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC-EEEEECCC-CCEEEE
Confidence 9999999999887 777887875 6777666653221 1234567899999998888777 99999998 999998
Q ss_pred ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccC------CCeEEEEEeeCCCEEEEEeCC------
Q 038577 473 LSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHT------HDVLTVVYRPDGRQLACSTLD------ 540 (860)
Q Consensus 473 ~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~~d------ 540 (860)
+..+ ..+.++.+.++|..+++++.++.|..+|..+++.+.+..... ..+..++..++|+++++....
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~ 239 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAG 239 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGG
T ss_pred EECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCcccccc
Confidence 8764 456678889999999999888899999999898776665322 237888999999988887421
Q ss_pred --CeEEEEeC-CCCceeEEEecccc
Q 038577 541 --GQIHFWDP-LNGELMYTIEGRRD 562 (860)
Q Consensus 541 --g~i~iwd~-~~~~~~~~~~~~~~ 562 (860)
+..+++++ .+|+.+.++.....
T Consensus 240 ~~~~~~~~~~~~~g~~~W~~~~~~~ 264 (276)
T 3no2_A 240 KGKHPQLVEIDSEGKVVWQLNDKVK 264 (276)
T ss_dssp GSCCCSEEEECTTSBEEEEECCTTT
T ss_pred ccCCceEEEECCCCCEEEEecCccc
Confidence 23456665 58899888877665
No 206
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.63 E-value=7e-14 Score=139.57 Aligned_cols=243 Identities=12% Similarity=0.038 Sum_probs=172.1
Q ss_pred eeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 038577 308 KITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 308 ~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 387 (860)
...+++++++|+.++++...++.|.+|+..+.........+...+.+++++++|+.+++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 6678999999985442545558999999766543332233345678999999998666655 889999998765443222
Q ss_pred ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC
Q 038577 388 TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG 467 (860)
Q Consensus 388 ~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~ 467 (860)
......+.+++++++++.+++...++.|.+|+..+...... .......+..++++++|+++++...++ .|.+||....
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~-~i~~~~~~~~ 181 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL-PFTGLNDPDGVAVDNSGNVYVTDTDNN-RVVKLEAESN 181 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC-CCCSCCSCCCEEECTTCCEEEEEGGGT-EEEEECTTTC
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee-ccccCCCceeEEEeCCCCEEEEECCCC-EEEEEecCCC
Confidence 22336789999999998777777788999997655433221 112223567899999998666655555 8999998877
Q ss_pred ceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEe
Q 038577 468 RLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWD 547 (860)
Q Consensus 468 ~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 547 (860)
........+...+.+++++++|.++++...++.|.+||............+...+.+++++|+|+++++...++.|++|+
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT 261 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEc
Confidence 65544444446789999999998777777788999999876543322223346789999999999888888899999999
Q ss_pred CCCCce
Q 038577 548 PLNGEL 553 (860)
Q Consensus 548 ~~~~~~ 553 (860)
+...+.
T Consensus 262 ~~~~~~ 267 (270)
T 1rwi_B 262 SLEHHH 267 (270)
T ss_dssp CCGGGS
T ss_pred CCCccc
Confidence 876553
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=2.9e-12 Score=130.04 Aligned_cols=277 Identities=6% Similarity=0.009 Sum_probs=195.6
Q ss_pred CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEE-EEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce
Q 038577 262 QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIH-LLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES 340 (860)
Q Consensus 262 ~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~ 340 (860)
.....+.++++.++++..++...++.|.+|+.. ++... .+......+..+++.++|...++. ..++.|..+|.. ++
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~-~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTE-NGANKIGKLSKK-GG 93 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEE-TTTTEEEEECTT-SC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEe-cCCCeEEEECCC-CC
Confidence 345678999999999977777678999999987 54433 122223578899999998865544 434889999988 54
Q ss_pred EEE-EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE-EeecCCCceEEEEEeeCCCEEEEEeCCCcEEEE
Q 038577 341 YIL-KQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFV-TFTEHTNAVTALHFMANNHSLLSASLDGTVRAW 418 (860)
Q Consensus 341 ~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~w 418 (860)
... ........+.++++.++|.++++...++.|..|+.. ++... .+......+.++++.++++.+++...++.|..|
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 432 223344678999999999988877768899999987 55442 233345678999999999866666667889999
Q ss_pred EccccceeeEeeC-CCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEE-ecCcccCeEEEEEcCCCCEEEEEe
Q 038577 419 DLFRYRNFRTFTT-PSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDI-LSGHEGPVHGLVFSPTNATLASSS 496 (860)
Q Consensus 419 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~-~~~h~~~v~~l~~s~~~~~l~s~~ 496 (860)
+. +++... +.. .....+..++++++|.+.++....+ .|.+||. +++.... +..+...+.+++++++|++.++..
T Consensus 173 ~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 173 TN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGN-KIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp CT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTT-EEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCC-EEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 98 554433 332 2334678999999998766555555 8999998 5554433 334556789999999999777766
Q ss_pred CCCcEEEEEccCCcceeE-EcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q 038577 497 WDKTVRLWNVFEGKGSVE-SFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 497 ~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 549 (860)
.++.|..||. ++..... .......+.+++++++|++.++.. . .|..+|.+
T Consensus 249 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 249 GANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp TTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred CCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 6789999998 4432221 222445688999999998665554 4 77777753
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.62 E-value=1.8e-13 Score=157.35 Aligned_cols=277 Identities=10% Similarity=0.058 Sum_probs=183.5
Q ss_pred CCCEEEeeeC------CeEEEEECC---CCcEEee------ccCCccCeeEEEEcCCCCEEEEEcCC-----CcEEEEEc
Q 038577 22 QNTKLISPVG------NRVSVTDLI---KSKTVTL------PVESSSNICRIAVSPDGTFLLTVDEN-----QRCHFINL 81 (860)
Q Consensus 22 dg~~l~~~~~------~~i~v~d~~---~~~~~~~------~~~h~~~v~~va~spdg~~la~~~~d-----~~i~vwd~ 81 (860)
||+++++... ..|.+.+.. +++...+ ..+|...+..++|||||++||++..+ ..|++||+
T Consensus 117 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl 196 (741)
T 1yr2_A 117 RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGV 196 (741)
T ss_dssp ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEET
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence 8999887641 235555655 4544433 22344578899999999999987543 46999999
Q ss_pred ccCeEEEEeecCCceeEEEECCCCCEEEEEe-C--------------CeEEEEeCCCCCcccceeEEEEEeeccCCCeEE
Q 038577 82 HCHVVLHRVRFKYPVNAILFSPNGKYIAVGT-G--------------KLVQIWRSPGFKKEVFAFELIRTLADCNDKVTA 146 (860)
Q Consensus 82 ~~~~~~~~~~~~~~v~~~~fspdg~~la~~~-~--------------~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 146 (860)
.+++.+........+..++|+|| +.|+++. + ..|++|++.++... -.++.....+...+..
T Consensus 197 ~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~---~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 197 ADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSA---DQPVFATPELPKRGHG 272 (741)
T ss_dssp TTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGG---CEEEECCTTCTTCEEE
T ss_pred CCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchh---CEEEeccCCCCeEEEE
Confidence 99988765333333468999999 9888872 2 24899998776521 1123333344446889
Q ss_pred EEEcCCCCeEEEeecCC-----eEEEEeecccccCccccc-ceEeecCCCcEEEEEEccCCCCCccceEEEEcCC----c
Q 038577 147 LNWSPDSNYLLVGSKDL-----AVRLFYVKEKLKGIHTNK-PFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARD----C 216 (860)
Q Consensus 147 l~~s~d~~~l~s~~~dg-----~v~vwd~~~~~~~~~~~~-~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~d----g 216 (860)
+.|||||++|+..+.++ .|.+||+.++ . .. ...+..+...+.... +|+++ .|+..+.+ +
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~-~----~~~~~~l~~~~~~~~~~~-~~dg~-----~l~~~s~~~~~~~ 341 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNG-K----IGPVTALIPDLKAQWDFV-DGVGD-----QLWFVSGDGAPLK 341 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETT-E----ECCCEEEECSSSSCEEEE-EEETT-----EEEEEECTTCTTC
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCC-C----CcccEEecCCCCceEEEE-eccCC-----EEEEEECCCCCCC
Confidence 99999999999877554 8999998765 1 12 445555655555553 48888 78777654 4
Q ss_pred cEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECC-C
Q 038577 217 YMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMP-D 295 (860)
Q Consensus 217 ~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~-~ 295 (860)
.|.+|++.+.. ..|.. .+..+...+..+.+. ++.++++...+|..++|.+. +
T Consensus 342 ~l~~~d~~~~~----------------------~~~~~----l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 342 KIVRVDLSGST----------------------PRFDT----VVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp EEEEEECSSSS----------------------CEEEE----EECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETT
T ss_pred EEEEEeCCCCc----------------------cccEE----EecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCC
Confidence 58888876521 02221 122333456677776 55677788888887776553 4
Q ss_pred ceeEEEEeec-CceeEEEEEeeCCCEEEEEEcc---CCcEEEEEccCce
Q 038577 296 FVCIHLLSIS-REKITTAVFNELGNWLVFGCAK---LGQLLVWEWRSES 340 (860)
Q Consensus 296 ~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~~---~g~i~v~d~~~~~ 340 (860)
+.....+..+ ...+..+.++|+++.+++.... .++++.||+.+++
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 5556666553 5678889999999877765443 3689999998876
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=3.8e-12 Score=129.19 Aligned_cols=275 Identities=11% Similarity=0.003 Sum_probs=192.1
Q ss_pred CceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEE-EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 038577 306 REKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYIL-KQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCF 384 (860)
Q Consensus 306 ~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 384 (860)
...+.++++.++|+..++. ..++.|.+||.. ++... ....+...+.++++.++|...++...++.|..||.. ++..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~-~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQ-HKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TCCEEEEEECTTSCEEEEE-TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeeECCCCCEEEEc-CCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 4577889999998866554 344899999988 54433 223334678999999999888777667899999987 5543
Q ss_pred E-EeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCC-CCCcEEEEEECCCCCEEEEEecCCCeEEEE
Q 038577 385 V-TFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTP-SSRQFVSLASDQSGEVICAGTLDSFEIFVW 462 (860)
Q Consensus 385 ~-~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~ 462 (860)
. ........+.++++.++++.+++...++.|..||.. ++.. .+..+ ....+..++++++|++.++...++ .|..|
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-~i~~~ 172 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNN-SIGRI 172 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTT-EEEEE
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCC-eEEEE
Confidence 2 222244678999999999887777768899999986 4443 23222 345678999999999555544444 89999
Q ss_pred ECCCCceEEE-ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeE-EcccCCCeEEEEEeeCCCEEEEEeCC
Q 038577 463 SMKTGRLLDI-LSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVE-SFPHTHDVLTVVYRPDGRQLACSTLD 540 (860)
Q Consensus 463 d~~~~~~~~~-~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d 540 (860)
|. +++.... ...+...+.++++.++|.+.++....+.|.+||. +++.... .......+.+++++++|++.++...+
T Consensus 173 ~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 173 TN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 98 5655432 2234567899999999987777666778999998 4442222 22345678999999999976666667
Q ss_pred CeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEEC
Q 038577 541 GQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 541 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
+.|..||. +++.. .+..... ...+.+++++++|++.++.. . .|..+|.
T Consensus 251 ~~i~~~~~-~g~~~-~~~~~~~------------------~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 251 NQIGRITN-DNTIQ-EYQLQTE------------------NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp TEEEEECT-TSCEE-EEECCST------------------TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CeEEEECC-CCcEE-EEECCcc------------------CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 89999998 45433 2221100 12368899999999777665 4 6776665
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=2.9e-13 Score=155.64 Aligned_cols=275 Identities=13% Similarity=0.084 Sum_probs=185.3
Q ss_pred cCCCCEEEEEEcCC-----eEEEEECC---CceeEEEEee------cCceeEEEEEeeCCCEEEEEEccCC----cEEEE
Q 038577 273 HRGLDMVVVGFSNG-----VFGLYQMP---DFVCIHLLSI------SREKITTAVFNELGNWLVFGCAKLG----QLLVW 334 (860)
Q Consensus 273 ~~~~~~l~~~~~~g-----~i~~~~~~---~~~~~~~~~~------~~~~i~~~~~s~~~~~l~~~~~~~g----~i~v~ 334 (860)
.|+|++++....++ .+.+.+.. .++....+.. +...+..++|||||+.++++....| .|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 38899888666543 34444443 3333332211 2236889999999999999887655 49999
Q ss_pred EccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCc--------------EEEEECCCCee--EEEee--cCCCceEE
Q 038577 335 EWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNK--------------VKVWTVSSGFC--FVTFT--EHTNAVTA 396 (860)
Q Consensus 335 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--------------i~iwd~~~~~~--~~~~~--~~~~~v~~ 396 (860)
|+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+..
T Consensus 195 dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 99998875432 12222357899999 98988876654 89999877652 22232 23345889
Q ss_pred EEEeeCCCEEEEEeCCC-----cEEEEEcccc--ceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC---CeEEEEECCC
Q 038577 397 LHFMANNHSLLSASLDG-----TVRAWDLFRY--RNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS---FEIFVWSMKT 466 (860)
Q Consensus 397 i~~~~~~~~l~s~~~dg-----~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~i~v~d~~~ 466 (860)
+.|+|||++|+..+.++ .|.+||+.++ +..+.+....... ... ++|+|+.++..+.++ +.|++||+.+
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ-WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC-EEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce-EEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 99999999988777544 7999999876 3144554443333 233 348999888877642 3699999987
Q ss_pred C--ceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEcc-CCcceeEEcc-cCCCeEEEEEeeCCCEEEEEe----
Q 038577 467 G--RLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVF-EGKGSVESFP-HTHDVLTVVYRPDGRQLACST---- 538 (860)
Q Consensus 467 ~--~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~---- 538 (860)
+ +....+..+...+.+++++ ++.++++...|+..++|.+. ++.....+.. ....+..+.++|+++.++...
T Consensus 351 ~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~ 429 (741)
T 1yr2_A 351 STPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFT 429 (741)
T ss_dssp SSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETT
T ss_pred CccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 5 3444555555667778887 66778888889988877664 3433333332 456788999999988666332
Q ss_pred CCCeEEEEeCCCCc
Q 038577 539 LDGQIHFWDPLNGE 552 (860)
Q Consensus 539 ~dg~i~iwd~~~~~ 552 (860)
..++|++||+.+++
T Consensus 430 ~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 430 QPATVLALDPATAK 443 (741)
T ss_dssp EEEEEEEEETTTTE
T ss_pred CCCEEEEEECCCCc
Confidence 34789999998887
No 211
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=4.1e-12 Score=129.92 Aligned_cols=240 Identities=9% Similarity=0.041 Sum_probs=168.7
Q ss_pred ccCeEEEEEcCCCCEEEE-------EeCCCcEEEEECCCCeeEEEee----cCCCceEEEEEeeC-CCEEEEEeCCCcEE
Q 038577 349 YFDVNCLAYSPDSQLLAT-------GADDNKVKVWTVSSGFCFVTFT----EHTNAVTALHFMAN-NHSLLSASLDGTVR 416 (860)
Q Consensus 349 ~~~v~~~~~s~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~i~~~~~-~~~l~s~~~dg~i~ 416 (860)
.....+++|+++|..+++ +..++.|.+||..+++...... ++...+.+++++++ ++.++ ++..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEE
Confidence 345688999999988777 5678899999988776543222 14467899999999 65444 44445799
Q ss_pred EEEccccceeeE-eeCC---CCCcEEEEEECCCCCEEEEEecCC--------------CeEEEEECCCCceEEEecCccc
Q 038577 417 AWDLFRYRNFRT-FTTP---SSRQFVSLASDQSGEVICAGTLDS--------------FEIFVWSMKTGRLLDILSGHEG 478 (860)
Q Consensus 417 ~wd~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~l~~~~~~~--------------~~i~v~d~~~~~~~~~~~~h~~ 478 (860)
+||.. ++.... .... ....+..++++++|+++++...++ +.|+.||.. ++..... .+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC
Confidence 99987 554332 2211 123467899999999887766541 378888876 6554333 3445
Q ss_pred CeEEEEEc----CCCCEEEEE-eCCCcEEEEEcc-CCcc-----eeEEcccC-CCeEEEEEeeCCCEEEEEeCCCeEEEE
Q 038577 479 PVHGLVFS----PTNATLASS-SWDKTVRLWNVF-EGKG-----SVESFPHT-HDVLTVVYRPDGRQLACSTLDGQIHFW 546 (860)
Q Consensus 479 ~v~~l~~s----~~~~~l~s~-~~dg~i~iwd~~-~~~~-----~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~iw 546 (860)
....++++ |+++.++.+ ..++.|.+||.. +++. ......+. ..+..++++++|+++++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 67889999 999765554 567899999986 3331 11111222 567889999999988888788999999
Q ss_pred eCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEE-EecCCCeEEEEECCC
Q 038577 547 DPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYIL-AGGSSKYICMYDVAD 612 (860)
Q Consensus 547 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~-~~~~dg~v~vwd~~~ 612 (860)
|..+++.+..+..+.. .+.+++|+|+|++|+ +...++.|..|++..
T Consensus 253 d~~~g~~~~~~~~~~~--------------------~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFE--------------------KPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTCBSCSEEEECSSS--------------------CEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCCcEeEEEeCCCC--------------------CceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9987877666654422 489999999999554 455668899998864
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.55 E-value=2.8e-13 Score=138.11 Aligned_cols=267 Identities=9% Similarity=-0.002 Sum_probs=183.3
Q ss_pred CEEEEEEccCC----cEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEe----------CCCcEEEEECCCCeeE
Q 038577 319 NWLVFGCAKLG----QLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGA----------DDNKVKVWTVSSGFCF 384 (860)
Q Consensus 319 ~~l~~~~~~~g----~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~ 384 (860)
..+++....++ .+.++|..+++.+.++.....+ .+.++||+++++++. .++.|.+||+.+++.+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 44445444434 8889999999999988655555 799999999998886 3678999999999999
Q ss_pred EEeecC-------CCceEEEEEeeCCCEEEEEeC--CCcEEE--EEccccceeeEeeCCCCCcEEEEEECCCCCEE-EEE
Q 038577 385 VTFTEH-------TNAVTALHFMANNHSLLSASL--DGTVRA--WDLFRYRNFRTFTTPSSRQFVSLASDQSGEVI-CAG 452 (860)
Q Consensus 385 ~~~~~~-------~~~v~~i~~~~~~~~l~s~~~--dg~i~~--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~ 452 (860)
.++..+ ......++++|||++++++.. +..+.+ +|..+ ...+..+.. ..+.|+++.. ++.
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~-----~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC-----FHIHPGAAATHYLG 181 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC-----CCCEEEETTEEECC
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc-----eEEccCCCeEEEEE
Confidence 988644 134678999999999998874 456888 89877 444543321 1123444322 233
Q ss_pred ecCCCeEEEEECCC-----CceEE----EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcc-eeEEcc-----
Q 038577 453 TLDSFEIFVWSMKT-----GRLLD----ILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKG-SVESFP----- 517 (860)
Q Consensus 453 ~~~~~~i~v~d~~~-----~~~~~----~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~----- 517 (860)
+.++ .+.+.|+.+ ++... .+.-...+. . ++++..++..+. +.+.+.|+..... ......
T Consensus 182 ~~dg-~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~ 255 (368)
T 1mda_H 182 SCPA-SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESG 255 (368)
T ss_dssp CCTT-SCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTH
T ss_pred cCCC-CEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccc
Confidence 3444 667777775 33321 111112333 3 666777666666 9999999865431 111110
Q ss_pred ------cCCCeEEEEEeeCCCEEEEEeC-C--------CeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCC
Q 038577 518 ------HTHDVLTVVYRPDGRQLACSTL-D--------GQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGK 582 (860)
Q Consensus 518 ------~~~~v~~~~~s~~~~~l~~~~~-d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (860)
.......++++||++.++++.. . +.+.++|+.+++.+..+.....
T Consensus 256 ~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~-------------------- 315 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD-------------------- 315 (368)
T ss_dssp HHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE--------------------
T ss_pred ccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC--------------------
Confidence 1111222689999998887643 2 3567999999999998876653
Q ss_pred cEEEEEEecCCCE-EEEec-CCCeEEEEECCCceEEEEEeec
Q 038577 583 CFTTLCYSADGSY-ILAGG-SSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 583 ~i~~l~~s~~g~~-l~~~~-~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
...++|+|||++ +++.. .++.|.++|+.+++.+++++..
T Consensus 316 -p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg 356 (368)
T 1mda_H 316 -SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp -ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred -cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECC
Confidence 789999999984 55555 5899999999999999887643
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=7.8e-12 Score=127.83 Aligned_cols=242 Identities=7% Similarity=0.018 Sum_probs=171.7
Q ss_pred ccCeeEEEEcCCCCEEEE-------EcCCCcEEEEEcccCeEEEEee-----cCCceeEEEECCC-CCEEEEEeCCeEEE
Q 038577 52 SSNICRIAVSPDGTFLLT-------VDENQRCHFINLHCHVVLHRVR-----FKYPVNAILFSPN-GKYIAVGTGKLVQI 118 (860)
Q Consensus 52 ~~~v~~va~spdg~~la~-------~~~d~~i~vwd~~~~~~~~~~~-----~~~~v~~~~fspd-g~~la~~~~~~i~i 118 (860)
-....+++|+++|+++++ ...++.|.+||..+++...... +...+.+++++|+ |+++++...+.|.+
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 345789999999987777 4667899999988887654332 3467899999999 87666665668999
Q ss_pred EeCCCCCcccceeEEEEEe-e-----ccCCCeEEEEEcCCCCeEEEeecC---------------CeEEEEeecccccCc
Q 038577 119 WRSPGFKKEVFAFELIRTL-A-----DCNDKVTALNWSPDSNYLLVGSKD---------------LAVRLFYVKEKLKGI 177 (860)
Q Consensus 119 wd~~~~~~~~~~~~~~~~~-~-----~h~~~v~~l~~s~d~~~l~s~~~d---------------g~v~vwd~~~~~~~~ 177 (860)
||.. ++. ..+ . .+...+.+++++++|++.++...+ +.|..|+.+ +
T Consensus 97 ~d~~-g~~--------~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g---- 162 (314)
T 1pjx_A 97 VQTD-GTF--------EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-G---- 162 (314)
T ss_dssp EETT-SCE--------EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-S----
T ss_pred EeCC-CCE--------EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-C----
Confidence 9988 542 222 1 112458899999999877776554 456666654 3
Q ss_pred ccccceEeecCCCcEEEEEEc----cCCCCCccceEEEE-cCCccEEEeeecC-CCCCCccccCCCCCCCCCCCcceeee
Q 038577 178 HTNKPFLLLGHRDSVVGCFFS----VDKKTDKVNRIYTI-ARDCYMFSWGFSG-NDGKIDETMEDSEPPSPGTPERRVKK 251 (860)
Q Consensus 178 ~~~~~~~~~~h~~~i~~~~~~----~~~~~~~~~~l~s~-~~dg~i~~w~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (860)
. ...+..+......++++ ++++ .++.+ ..++.|.+|+... +.. ..
T Consensus 163 --~-~~~~~~~~~~~~~i~~~~~~d~dg~-----~l~v~~~~~~~i~~~~~~~~g~~---------------------~~ 213 (314)
T 1pjx_A 163 --Q-MIQVDTAFQFPNGIAVRHMNDGRPY-----QLIVAETPTKKLWSYDIKGPAKI---------------------EN 213 (314)
T ss_dssp --C-EEEEEEEESSEEEEEEEECTTSCEE-----EEEEEETTTTEEEEEEEEETTEE---------------------EE
T ss_pred --C-EEEeccCCCCcceEEEecccCCCCC-----EEEEEECCCCeEEEEECCCCCcc---------------------cc
Confidence 1 22223334456889999 9986 55555 5678999999762 210 00
Q ss_pred EEeeeeccccCCC-CceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCc
Q 038577 252 WGLLRKDDFSQAP-SKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQ 330 (860)
Q Consensus 252 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~ 330 (860)
. .....+..+. ..+..++++++|+++++...++.|.+|+..+++....+..+...+.+++++++|+.|+++...++.
T Consensus 214 ~--~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 214 K--KVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp E--EEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred c--eEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCe
Confidence 0 0011122232 567889999999988887788999999998777777777776789999999999988888776689
Q ss_pred EEEEEccC
Q 038577 331 LLVWEWRS 338 (860)
Q Consensus 331 i~v~d~~~ 338 (860)
|..|++..
T Consensus 292 l~~~~~~~ 299 (314)
T 1pjx_A 292 VWKFEWQR 299 (314)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 99998764
No 214
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.52 E-value=1.2e-07 Score=104.55 Aligned_cols=522 Identities=11% Similarity=0.036 Sum_probs=303.8
Q ss_pred CCEEEeeeCCeEEEEECCCCcEEe-eccCCccCeeEEEEcCCCCEEEEEc-CCCcEEEEEcccCeEEEEeec-CCceeEE
Q 038577 23 NTKLISPVGNRVSVTDLIKSKTVT-LPVESSSNICRIAVSPDGTFLLTVD-ENQRCHFINLHCHVVLHRVRF-KYPVNAI 99 (860)
Q Consensus 23 g~~l~~~~~~~i~v~d~~~~~~~~-~~~~h~~~v~~va~spdg~~la~~~-~d~~i~vwd~~~~~~~~~~~~-~~~v~~~ 99 (860)
..+|+++.++.|+..|+.+..... .+...-..+..++|++++..|..++ .++.|..+++........+.. ......+
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 347888888999999998765433 3333446788999999777766554 468888888876543333332 2457789
Q ss_pred EECCCCCEEEEE--eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEee--cCCeEEEEeeccccc
Q 038577 100 LFSPNGKYIAVG--TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGS--KDLAVRLFYVKEKLK 175 (860)
Q Consensus 100 ~fspdg~~la~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~--~dg~v~vwd~~~~~~ 175 (860)
++.+.+..|..+ ..+.|.+.++.+... ...+...-.....+++.|....|+... ..+.|...+++..
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~-------~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-- 156 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHR-------QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-- 156 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTC-------EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcE-------EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC--
Confidence 998877777666 568899999887642 111223345578999999666666554 2456777776654
Q ss_pred CcccccceEeecCCCcEEEEEEccCCCCCccceEEEEc-CCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEe
Q 038577 176 GIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA-RDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGL 254 (860)
Q Consensus 176 ~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (860)
....+...-.....+++.+++. +|+.+. ..+.|...++++... .+
T Consensus 157 -----~~~~l~~~~~~P~GlalD~~~~-----~LY~aD~~~~~I~~~d~dG~~~------------------------~v 202 (628)
T 4a0p_A 157 -----ERTTLVPNVGRANGLTIDYAKR-----RLYWTDLDTNLIESSNMLGLNR------------------------EV 202 (628)
T ss_dssp -----SCEEEECSCSSEEEEEEETTTT-----EEEEEETTTTEEEEEETTSCSC------------------------EE
T ss_pred -----ceEEEECCCCCcceEEEccccC-----EEEEEECCCCEEEEEcCCCCce------------------------EE
Confidence 2233334556788999999876 666664 457788888765321 00
Q ss_pred eeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEE-EEEEc----cCC
Q 038577 255 LRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWL-VFGCA----KLG 329 (860)
Q Consensus 255 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~----~~g 329 (860)
+.........+++.. +..+++-...+.|...|..+++....+.........+........- .-.+. .-.
T Consensus 203 -----~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~ 276 (628)
T 4a0p_A 203 -----IADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCS 276 (628)
T ss_dssp -----EEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCS
T ss_pred -----eeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcc
Confidence 111222345677654 3344444457889999987777666655443334444332211100 00000 001
Q ss_pred cEEEEEccCceEEEEec-C---cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee-EEEee-cCCCceEEEEEeeCC
Q 038577 330 QLLVWEWRSESYILKQQ-G---HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFC-FVTFT-EHTNAVTALHFMANN 403 (860)
Q Consensus 330 ~i~v~d~~~~~~~~~~~-~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~-~~~~~v~~i~~~~~~ 403 (860)
.+.+-... +.....-. + .....+|.. ...+++.+.. ..|+-..+..... ...+. ..-..+.+++|.+..
T Consensus 277 ~~C~~~~~-~~~~C~C~~g~~l~~d~~~C~~---~~~~Ll~s~~-~~i~~i~l~~~~~~~~~l~~~~~~~~~~ld~d~~~ 351 (628)
T 4a0p_A 277 HLCLAVPV-GGFVCGCPAHYSLNADNRTCSA---PTTFLLFSQK-SAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLD 351 (628)
T ss_dssp SEEEEETT-TEEEEECSTTCEECTTSSCEEC---CSSEEEEEET-TEEEEECCCTTCCCCEECCCTTCSCEEEEEEETTT
T ss_pred hhhhcCCC-CCeeEEcCCCcEecccCCcCcc---ccceeeeecc-ceEEEEecccccCceEEEEehhcCCceEEEEecCC
Confidence 12222110 11111100 0 111122321 2345555443 5676666543321 11221 223567889999866
Q ss_pred CEEEEE-eCCCcEEEEEccccceeeEeeC-----CCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEe-cCc
Q 038577 404 HSLLSA-SLDGTVRAWDLFRYRNFRTFTT-----PSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDIL-SGH 476 (860)
Q Consensus 404 ~~l~s~-~~dg~i~~wd~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~-~~h 476 (860)
..|+.+ ...+.|..+++........+.. .....+..++++..++.|+.+....+.|.+.++. |+....+ ...
T Consensus 352 ~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~~~~ 430 (628)
T 4a0p_A 352 KQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVLKGE 430 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEEECT
T ss_pred CeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEEeCC
Confidence 565544 4567788887754433333322 1233578999999988887776665599999986 5554443 334
Q ss_pred ccCeEEEEEcCC-CCEEEEEeCCC--cEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeC-CCeEEEEeCCCCc
Q 038577 477 EGPVHGLVFSPT-NATLASSSWDK--TVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTL-DGQIHFWDPLNGE 552 (860)
Q Consensus 477 ~~~v~~l~~s~~-~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~ 552 (860)
.....+|++.|. |.++++-.... .|...++............-...+.++++++++.|+.+.. .+.|..++++ |.
T Consensus 431 l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G~ 509 (628)
T 4a0p_A 431 QDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLS-GA 509 (628)
T ss_dssp TCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SC
T ss_pred CCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-CC
Confidence 567899999995 54444432222 5666666544322222233456799999998888877754 5789999985 44
Q ss_pred eeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEe
Q 038577 553 LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~ 620 (860)
....+.... .....+++... +....+-...+.|...|..+|+....+.
T Consensus 510 ~r~~~~~~~-------------------~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i~ 557 (628)
T 4a0p_A 510 NRIVLEDSN-------------------ILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKVQ 557 (628)
T ss_dssp SCEEEECSS-------------------CSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEEE
T ss_pred ceEEEEcCC-------------------CCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEEe
Confidence 344443211 11356777754 4444555566788888888777655443
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=5e-11 Score=120.16 Aligned_cols=236 Identities=12% Similarity=0.111 Sum_probs=163.0
Q ss_pred cCeeEEEEcCCCC-EEEEEcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCccccee
Q 038577 53 SNICRIAVSPDGT-FLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAF 131 (860)
Q Consensus 53 ~~v~~va~spdg~-~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~ 131 (860)
.-..+..|+|++. ++++...++.|..||..+++. ..+.....+.+++++|+|+++++ .++.|.+||..+++.
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~----- 85 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSA----- 85 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEE-----
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-ECCeEEEEECCCCcE-----
Confidence 3456889999655 455556678999999988765 44556788999999999995555 578899999987652
Q ss_pred EEEEEeec--cCCCeEEEEEcCCCCeEEEeecC---------CeEEEEeecccccCcccccceEeecCCCcEEEEEEccC
Q 038577 132 ELIRTLAD--CNDKVTALNWSPDSNYLLVGSKD---------LAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVD 200 (860)
Q Consensus 132 ~~~~~~~~--h~~~v~~l~~s~d~~~l~s~~~d---------g~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~ 200 (860)
..+..... ....+..++++|+|++.++...+ ..-.+|.++.. .....+..+......++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~------g~~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD------HHVKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT------SCEEEEEEEESBEEEEEECTT
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC------CCEEEEeeccccccceEEcCC
Confidence 11121111 12347889999999976654322 33466666543 122233344456789999999
Q ss_pred CCCCccceEE-EEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEE
Q 038577 201 KKTDKVNRIY-TIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMV 279 (860)
Q Consensus 201 ~~~~~~~~l~-s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 279 (860)
++ .++ +.+.++.|..|+++..... +..- .....+.........++++++|++.
T Consensus 160 g~-----~lyv~~~~~~~i~~~~~d~~~G~-------------------~~~~--~~~~~~~~~~~~p~g~~~d~~G~lw 213 (297)
T 3g4e_A 160 HK-----IFYYIDSLSYSVDAFDYDLQTGQ-------------------ISNR--RSVYKLEKEEQIPDGMCIDAEGKLW 213 (297)
T ss_dssp SC-----EEEEEEGGGTEEEEEEECTTTCC-------------------EEEE--EEEEECCGGGCEEEEEEEBTTSCEE
T ss_pred CC-----EEEEecCCCCcEEEEeccCCCCc-------------------ccCc--EEEEECCCCCCCCCeeEECCCCCEE
Confidence 98 665 4556788999988521110 0000 0011112223467889999999887
Q ss_pred EEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEe-eCCCEEEEEEcc
Q 038577 280 VVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFN-ELGNWLVFGCAK 327 (860)
Q Consensus 280 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~~ 327 (860)
++....+.|..|+..+++.+..+..+...+++++|. |+++.|.+++..
T Consensus 214 va~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 214 VACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 777788899999998899999888887889999999 899988887764
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.50 E-value=5.8e-11 Score=119.72 Aligned_cols=230 Identities=11% Similarity=0.054 Sum_probs=162.2
Q ss_pred CceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 038577 306 REKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFV 385 (860)
Q Consensus 306 ~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 385 (860)
..-..+..|++++..++.+....+.|..||..++.... + .....+.+++++++|+++++ . ++.|.+||..+++...
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 34556889999888888887777999999998876532 2 23467899999999995554 4 5689999998876543
Q ss_pred Eeec----CCCceEEEEEeeCCCEEEEEeCC---------CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEE
Q 038577 386 TFTE----HTNAVTALHFMANNHSLLSASLD---------GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAG 452 (860)
Q Consensus 386 ~~~~----~~~~v~~i~~~~~~~~l~s~~~d---------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 452 (860)
.... ....+.+++++|+|+.+++...+ ..-.+|.+........+. ........++++|+++.++++
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-DQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-EEESBEEEEEECTTSCEEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-eccccccceEEcCCCCEEEEe
Confidence 3322 12357899999999866654321 234555554322222221 112245789999999988776
Q ss_pred ecCCCeEEEEEC--CCCceE-----EEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEE
Q 038577 453 TLDSFEIFVWSM--KTGRLL-----DILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTV 525 (860)
Q Consensus 453 ~~~~~~i~v~d~--~~~~~~-----~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 525 (860)
....+.|.+|++ .++... ..+..+.+.+..++++++|++.++...++.|..||..+++....+..+...++++
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~ 246 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSC 246 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEE
Confidence 665449999987 455432 2333345678899999999988888778889999998888666666666789999
Q ss_pred EEe-eCCCEEEEEeCC
Q 038577 526 VYR-PDGRQLACSTLD 540 (860)
Q Consensus 526 ~~s-~~~~~l~~~~~d 540 (860)
+|. |+++.|++++..
T Consensus 247 ~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 247 CFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEESGGGCEEEEEEBC
T ss_pred EEeCCCCCEEEEEcCC
Confidence 999 898888776643
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.49 E-value=3.7e-11 Score=126.36 Aligned_cols=250 Identities=17% Similarity=0.099 Sum_probs=170.2
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCC--cEEEEEccccceee
Q 038577 350 FDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDG--TVRAWDLFRYRNFR 427 (860)
Q Consensus 350 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~ 427 (860)
.....++++++++++++...++.|++||..++........ ..... ++|+++++.|+++..++ .|.+|+........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 4578999999999777777789999999988877655544 33334 99999999999888866 78888887655433
Q ss_pred Ee---eCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEE----ecCcccCe--EEEEEcCC-CCEEEEEeC
Q 038577 428 TF---TTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDI----LSGHEGPV--HGLVFSPT-NATLASSSW 497 (860)
Q Consensus 428 ~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~----~~~h~~~v--~~l~~s~~-~~~l~s~~~ 497 (860)
.+ .......+.+++++|++..|+++..++ .|+.||..++..... ..++...- ..++|+|+ +.++++-..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~-~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNK-NFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTC-EEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCC-cEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 33 121334567899999666666666655 999999987764332 22222222 39999995 555566666
Q ss_pred CCcEEEEEccCCcceeEEccc---------------CCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEeccc
Q 038577 498 DKTVRLWNVFEGKGSVESFPH---------------THDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRR 561 (860)
Q Consensus 498 dg~i~iwd~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~ 561 (860)
.+.|+.|+.... .....++ -.....++++|+|+++++-. .++.|+.|++.++.. ..+.++.
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 788999987543 2222222 24578999999999777766 788999999888764 4444432
Q ss_pred ccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEEC
Q 038577 562 DISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDV 610 (860)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~ 610 (860)
...+.... ......-.....++++++|.++++-..++.|+.+++
T Consensus 365 ~~~g~~~g-----~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDG-----TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCB-----STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCC-----ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 11100000 000111235799999999988888888888888775
No 218
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.49 E-value=7.9e-12 Score=140.39 Aligned_cols=280 Identities=12% Similarity=0.123 Sum_probs=197.9
Q ss_pred CCEEEEEEcCCeEEEEECCCceeEEEEeecCce-----------eEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEE
Q 038577 276 LDMVVVGFSNGVFGLYQMPDFVCIHLLSISREK-----------ITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILK 344 (860)
Q Consensus 276 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~-----------i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~ 344 (860)
+..+++++.++.|.-+|..+++.+..+...... ...+++ ++..+++++.+ +.|..+|..+++.+.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~d-g~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWD-GRLIALDAATGKEVWH 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTT-SEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCC-CEEEEEECCCCCEEee
Confidence 567888888999999999999999877654321 112222 45666666554 9999999999999988
Q ss_pred ecCc-c----cCeEE-EEEcCCCCEEEEEeC------CCcEEEEECCCCeeEEEeecCCCc-------------------
Q 038577 345 QQGH-Y----FDVNC-LAYSPDSQLLATGAD------DNKVKVWTVSSGFCFVTFTEHTNA------------------- 393 (860)
Q Consensus 345 ~~~~-~----~~v~~-~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~------------------- 393 (860)
+..+ . ..+.+ ..+ .+..+++++. +|.|+.||..+|+.+..+......
T Consensus 154 ~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 7654 1 11111 111 2345555553 689999999999998877543211
Q ss_pred -------------eEEEEEeeCCCEEEEEeCCC-------------------cEEEEEccccceeeEeeCCCC-------
Q 038577 394 -------------VTALHFMANNHSLLSASLDG-------------------TVRAWDLFRYRNFRTFTTPSS------- 434 (860)
Q Consensus 394 -------------v~~i~~~~~~~~l~s~~~dg-------------------~i~~wd~~~~~~~~~~~~~~~------- 434 (860)
...+++++++..++.+..++ .|..+|..+++....+.....
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 12567888888888877664 499999999998888765322
Q ss_pred -CcEEEEEECCCC---CEEEEEecCCCeEEEEECCCCceEEEecCcc-----------cCe-------------------
Q 038577 435 -RQFVSLASDQSG---EVICAGTLDSFEIFVWSMKTGRLLDILSGHE-----------GPV------------------- 480 (860)
Q Consensus 435 -~~~~~~~~~~~~---~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-----------~~v------------------- 480 (860)
.....+....+| ..++.++.++ .++++|..+|+++..+.... .++
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G-~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNG-FFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTS-EEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred CCCcEEEecccCCcEeeEEEEECCCC-EEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 122233334467 6777787777 99999999999987664221 011
Q ss_pred -----EEEEEcCCCCEEEEEeC-------------------------------------------CCcEEEEEccCCcce
Q 038577 481 -----HGLVFSPTNATLASSSW-------------------------------------------DKTVRLWNVFEGKGS 512 (860)
Q Consensus 481 -----~~l~~s~~~~~l~s~~~-------------------------------------------dg~i~iwd~~~~~~~ 512 (860)
..++++|++.++++... .|.|..||+.+++..
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~ 470 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAA 470 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEE
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEE
Confidence 15688998888877543 277999999999855
Q ss_pred eEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccc
Q 038577 513 VESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRD 562 (860)
Q Consensus 513 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 562 (860)
.... +..++....++.++..+++++.||.+++||..+|+.+..+.....
T Consensus 471 W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 519 (677)
T 1kb0_A 471 WSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG 519 (677)
T ss_dssp EEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC
Confidence 5443 444455666778888999999999999999999999999986553
No 219
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.48 E-value=5.7e-11 Score=124.71 Aligned_cols=302 Identities=10% Similarity=0.053 Sum_probs=199.9
Q ss_pred CCCEEEEEEcCCeEEEEECCCceeEEEEeecC--------ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec
Q 038577 275 GLDMVVVGFSNGVFGLYQMPDFVCIHLLSISR--------EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ 346 (860)
Q Consensus 275 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~--------~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~ 346 (860)
.+..+++++.++.+..+|..+++.+....... ..........++..+++++.+ +.|..+|..+++.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-AQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-SEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-CEEEEEECCCCCEEEEEe
Confidence 46788889999999999999999887666532 111222233345666666655 999999999999887765
Q ss_pred CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCce-----EEEEEeeCCCEEEEEeCCCcEEEEEcc
Q 038577 347 GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAV-----TALHFMANNHSLLSASLDGTVRAWDLF 421 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~i~~~~~~~~l~s~~~dg~i~~wd~~ 421 (860)
............ +..+++++.++.+..+|..+++.+.......... ...... +..++.++.++.+..+|..
T Consensus 131 ~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 433222222222 4478888899999999999999887765432211 122222 3467888889999999999
Q ss_pred ccceeeEeeCCCCCcE---E---EEEECC--CCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEE
Q 038577 422 RYRNFRTFTTPSSRQF---V---SLASDQ--SGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLA 493 (860)
Q Consensus 422 ~~~~~~~~~~~~~~~~---~---~~~~~~--~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~ 493 (860)
+++............. . .+...| .+..+++++.++ .+..+|..+|+.+..... .....+.. ++..++
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g-~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~ 281 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG-NLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIY 281 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTS-CEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCc-EEEEEECCCCcEEeeccC--CCCCCceE--ECCEEE
Confidence 9988777664422100 0 000111 246677777776 899999999998876652 23444444 466788
Q ss_pred EEeCCCcEEEEEccCCcceeEEcc-cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCcccccc
Q 038577 494 SSSWDKTVRLWNVFEGKGSVESFP-HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDR 572 (860)
Q Consensus 494 s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 572 (860)
.++.++.+..+|..+++....... .......... .+..|++++.+|.++++|..+|+.+.........
T Consensus 282 ~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~--------- 350 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSG--------- 350 (376)
T ss_dssp EEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTC---------
T ss_pred EEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCc---------
Confidence 888899999999999986655442 2222233333 3567888999999999999999998877652210
Q ss_pred ccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEE
Q 038577 573 RSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYD 609 (860)
Q Consensus 573 ~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd 609 (860)
....... .+..|+.++.+|.|..|+
T Consensus 351 ----------~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 351 ----------FQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ----------BCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ----------ceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 0111111 255778888999999886
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.47 E-value=5.7e-11 Score=124.96 Aligned_cols=236 Identities=8% Similarity=0.011 Sum_probs=166.7
Q ss_pred ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeE
Q 038577 307 EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDN--KVKVWTVSSGFCF 384 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~ 384 (860)
.....++++++|+ |+++...++.|++||..++........... .. ++|+++++.++++..++ .|.+|+...+...
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 3678899999988 555555558999999998877655544322 33 99999999998888766 7999998766554
Q ss_pred EEe----ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeE----eeCCCCCcEE-EEEECCCCCEEEEEecC
Q 038577 385 VTF----TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRT----FTTPSSRQFV-SLASDQSGEVICAGTLD 455 (860)
Q Consensus 385 ~~~----~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~l~~~~~~ 455 (860)
..+ ......+.+++++|++..|+.+..++.|..||..++..... .......... .++++|++..|+++...
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 443 22456788999999555566677788999999977653222 1111111112 89999976666666665
Q ss_pred CCeEEEEECCCCceEEEecCcc---------------cCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcceeEEccc-
Q 038577 456 SFEIFVWSMKTGRLLDILSGHE---------------GPVHGLVFSPTNATLASSS-WDKTVRLWNVFEGKGSVESFPH- 518 (860)
Q Consensus 456 ~~~i~v~d~~~~~~~~~~~~h~---------------~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~- 518 (860)
.+.|+.|+.... ...+.++. .....++++|+|+++++-+ .++.|+.|++.++. +..+.++
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCC
Confidence 559999997643 33333332 3478999999999777777 78999999987765 3333332
Q ss_pred --------------CCCeEEEEEeeCCCEEEEEeCCCeEEEEeC
Q 038577 519 --------------THDVLTVVYRPDGRQLACSTLDGQIHFWDP 548 (860)
Q Consensus 519 --------------~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~ 548 (860)
-.....++++|+|.++++-..++.|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 245889999999887777777888888765
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.46 E-value=4.3e-12 Score=129.33 Aligned_cols=259 Identities=10% Similarity=-0.046 Sum_probs=179.1
Q ss_pred eEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEc---------cCCcEEEEEccCceEEEEecCc-------cc
Q 038577 287 VFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCA---------KLGQLLVWEWRSESYILKQQGH-------YF 350 (860)
Q Consensus 287 ~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------~~g~i~v~d~~~~~~~~~~~~~-------~~ 350 (860)
.|.++|..+++.+..+.....+ .+.++|||+.++++.. .++.|.+||..+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8899999999999999988776 7999999999999873 3588999999999998887533 12
Q ss_pred CeEEEEEcCCCCEEEEEeC--CCcEEE--EECCCCeeEEEeecCCCceEEEEEeeCC-CEEEEEeCCCcEEEEEccc---
Q 038577 351 DVNCLAYSPDSQLLATGAD--DNKVKV--WTVSSGFCFVTFTEHTNAVTALHFMANN-HSLLSASLDGTVRAWDLFR--- 422 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~~wd~~~--- 422 (860)
....++++|||++++++.. +..+.+ +|..+ +..+... +. ..+.|++ +.+++.+.||.+.+.++.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 3567999999999998864 457888 88876 3444321 11 1233444 3556667788888888876
Q ss_pred --cceee----EeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc--eEEEecC-------c---ccCeEEEE
Q 038577 423 --YRNFR----TFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR--LLDILSG-------H---EGPVHGLV 484 (860)
Q Consensus 423 --~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~--~~~~~~~-------h---~~~v~~l~ 484 (860)
++... .+... ..+. . ++++..++..+. + .+.+.|..++. .+..+.- + ......++
T Consensus 198 ~~~~v~~~~t~~i~vg-~~P~---~-~~~~~~~~~vs~-~-~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCS-SQAA---Q-ANYPGMLVWAVA-S-SILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCEECCCCSCTTSCBC-SCCE---E-ETTTTEEEECBS-S-CCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred cCCeEEEEeeeeeeCC-CCcc---c-cccCCEEEEEcC-C-EEEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 33221 11111 1122 3 566666655555 5 89999987543 2222211 0 11122278
Q ss_pred EcCCCCEEEEEeC---------CCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCE-EEEEe-CCCeEEEEeCCCCce
Q 038577 485 FSPTNATLASSSW---------DKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQ-LACST-LDGQIHFWDPLNGEL 553 (860)
Q Consensus 485 ~s~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~-~dg~i~iwd~~~~~~ 553 (860)
++|+++.++.+.. ++.+.++|+.+.+.+..+. .......++|+|||++ +++.. .++.|.++|+.+++.
T Consensus 271 ~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~-vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 271 KLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred EcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE-CCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 9999998876543 2356699999988554443 3336889999999985 55555 589999999999999
Q ss_pred eEEEecccc
Q 038577 554 MYTIEGRRD 562 (860)
Q Consensus 554 ~~~~~~~~~ 562 (860)
+.++.....
T Consensus 350 v~~I~vg~~ 358 (368)
T 1mda_H 350 QSSVELDKG 358 (368)
T ss_dssp EEECCCCSC
T ss_pred EEEEECCCC
Confidence 999876543
No 222
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.46 E-value=1.4e-07 Score=103.98 Aligned_cols=476 Identities=8% Similarity=-0.003 Sum_probs=268.4
Q ss_pred EEEeeeCCeEEEEECCCCc-EEeeccCCccCeeEEEEcCCCCEEEEEcC-CCcEEEEEcccCeE-EEEee-cCCceeEEE
Q 038577 25 KLISPVGNRVSVTDLIKSK-TVTLPVESSSNICRIAVSPDGTFLLTVDE-NQRCHFINLHCHVV-LHRVR-FKYPVNAIL 100 (860)
Q Consensus 25 ~l~~~~~~~i~v~d~~~~~-~~~~~~~h~~~v~~va~spdg~~la~~~~-d~~i~vwd~~~~~~-~~~~~-~~~~v~~~~ 100 (860)
+|..+..+.|+..|+.... ....+......+..++|++.+..|..+.. .+.|..+++..... ...+. .-.....++
T Consensus 11 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlA 90 (619)
T 3s94_A 11 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLA 90 (619)
T ss_dssp CEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEE
T ss_pred eEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEE
Confidence 5677788899999998764 33333345567899999997777776654 57888888876532 12222 225688999
Q ss_pred ECCCCCEEEEE--eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeec--CCeEEEEeecccccC
Q 038577 101 FSPNGKYIAVG--TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSK--DLAVRLFYVKEKLKG 176 (860)
Q Consensus 101 fspdg~~la~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~--dg~v~vwd~~~~~~~ 176 (860)
+.+.+..|..+ ..+.|.+.++.+... .......-.....|++.|.+.+|+.+.. .+.|...+++..
T Consensus 91 vD~~~~~ly~~d~~~~~I~v~~~dG~~~-------~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~--- 160 (619)
T 3s94_A 91 CDWLGEKLYWTDSETNRIEVSNLDGSLR-------KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--- 160 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC-------EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC---
T ss_pred EEecCCEEEEEeCCCCEEEEEECCCCCE-------EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC---
Confidence 99977777776 568999999987642 1122234455788999997666665543 355666665543
Q ss_pred cccccceEeecCCCcEEEEEEccCCCCCccceEEEEc-CCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEee
Q 038577 177 IHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA-RDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLL 255 (860)
Q Consensus 177 ~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~-~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (860)
.........-.....+++.+++. .|+.+. ..+.|...++++..... +
T Consensus 161 ---~~~~l~~~~~~~P~Glald~~~~-----~LY~aD~~~~~I~~~~~dG~~~~~-----------------------~- 208 (619)
T 3s94_A 161 ---SRFIIINSEIYWPNGLTLDYEEQ-----KLYWADAKLNFIHKSNLDGTNRQA-----------------------V- 208 (619)
T ss_dssp ---SCEEEECSSCSSEEEEEEETTTT-----EEEEEETTTCCEEEESSSCCEEC--------------------------
T ss_pred ---ceEEEEeCCCCCCcEEEEEccCC-----EEEEEeCCCCeEEEecCCCCccEE-----------------------E-
Confidence 12222333456788999998776 666554 45678888776532100 0
Q ss_pred eeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCc-------------------------eeE
Q 038577 256 RKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISRE-------------------------KIT 310 (860)
Q Consensus 256 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~-------------------------~i~ 310 (860)
..........+++..+ ...++-..++.|...|..+++....+..... ...
T Consensus 209 ----~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs 283 (619)
T 3s94_A 209 ----VKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCS 283 (619)
T ss_dssp -----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCS
T ss_pred ----EeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCccc
Confidence 0000111234444433 2333333456676666655443322211100 011
Q ss_pred EEEE-----------eeCC---------------CEEEEEEccCCcEEEEEccCceEE-EEec-CcccCeEEEEEcCCCC
Q 038577 311 TAVF-----------NELG---------------NWLVFGCAKLGQLLVWEWRSESYI-LKQQ-GHYFDVNCLAYSPDSQ 362 (860)
Q Consensus 311 ~~~~-----------s~~~---------------~~l~~~~~~~g~i~v~d~~~~~~~-~~~~-~~~~~v~~~~~s~~~~ 362 (860)
.+++ .|.| .+|+++. . +.|+..++...... ..+. ..-..+.+++|.+.+.
T Consensus 284 ~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~-~-~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~ 361 (619)
T 3s94_A 284 HLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLAR-R-TDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEG 361 (619)
T ss_dssp SEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEE-S-SCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTT
T ss_pred ceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEc-c-cceEEEecCCCccceeEEeccccCccEEEEEEcCCC
Confidence 1111 1111 1233332 2 55666666544221 1111 1224577899998655
Q ss_pred EEEEEe-CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCC-CEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEE
Q 038577 363 LLATGA-DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANN-HSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSL 440 (860)
Q Consensus 363 ~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~-~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~ 440 (860)
.|..+. ..+.|+.+++........+...-..+.++++...+ +.+++-+..+.|.+.++... ..+.+....-.....+
T Consensus 362 ~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~~P~~i 440 (619)
T 3s94_A 362 YIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT-MRKILISEDLEEPRAI 440 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECTTCCSEEEE
T ss_pred eEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC-eEEEEEECCCCCeeeE
Confidence 555544 57789999887544433343334567789998744 45555556778999988644 3344444444577999
Q ss_pred EECCCCCEEEEEecC-CCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCcceeEEccc
Q 038577 441 ASDQSGEVICAGTLD-SFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW-DKTVRLWNVFEGKGSVESFPH 518 (860)
Q Consensus 441 ~~~~~~~~l~~~~~~-~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~ 518 (860)
+++|....|+.+... ...|...++............-...+.|++++++..|..+.. .+.|..+++............
T Consensus 441 avdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~ 520 (619)
T 3s94_A 441 VLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDK 520 (619)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECC
T ss_pred EEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccC
Confidence 999986666665542 247888887644333333444567889999997777776654 467888888655432222222
Q ss_pred CCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCc
Q 038577 519 THDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGE 552 (860)
Q Consensus 519 ~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~ 552 (860)
......++...+ +|+.+. ..+.|...|..++.
T Consensus 521 l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 521 IPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp CCSSCCEEEETT--EEEEECTTSSCEEEEESSSCC
T ss_pred CCCcEEEEEECC--EEEEeecCCCeEEEEEcCCCc
Confidence 222334555422 455543 34557777777763
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=2e-11 Score=137.34 Aligned_cols=283 Identities=11% Similarity=0.079 Sum_probs=192.5
Q ss_pred CCEEEEEEcCCeEEEEECCCceeEEEEeecCce---------eEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec
Q 038577 276 LDMVVVGFSNGVFGLYQMPDFVCIHLLSISREK---------ITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ 346 (860)
Q Consensus 276 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~---------i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~ 346 (860)
+..+++++.++.|..+|..+++.+..+...... ...-....++..+++++.+ +.|..+|.++++.+....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d-g~l~AlDa~TG~~~W~~~ 148 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD-GRLEAIDAKTGQRAWSVD 148 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-SEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-CEEEEEECCCCCEeeeec
Confidence 667888888999999999999998877654321 0001112245666666554 999999999999988775
Q ss_pred Cc--ccCeEEEEEcC---CCCEEEEEe------CCCcEEEEECCCCeeEEEeecCC------------------------
Q 038577 347 GH--YFDVNCLAYSP---DSQLLATGA------DDNKVKVWTVSSGFCFVTFTEHT------------------------ 391 (860)
Q Consensus 347 ~~--~~~v~~~~~s~---~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~------------------------ 391 (860)
.. ......+..+| ++ .++++. .+|.|+.||..+|+.+..+....
T Consensus 149 ~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 149 TRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp CCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred CcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 42 11111111122 44 455543 36899999999999987765210
Q ss_pred -------CceEEEEEeeCCCEEEEEeCCCc-------------------EEEEEccccceeeEeeCCCC--------CcE
Q 038577 392 -------NAVTALHFMANNHSLLSASLDGT-------------------VRAWDLFRYRNFRTFTTPSS--------RQF 437 (860)
Q Consensus 392 -------~~v~~i~~~~~~~~l~s~~~dg~-------------------i~~wd~~~~~~~~~~~~~~~--------~~~ 437 (860)
.....++++|+...++.+..++. |..+|..+++....+..... ...
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 01125778888888888887763 99999999999888765321 122
Q ss_pred EEEEECCCCC---EEEEEecCCCeEEEEECCCCceEEEecCcc-c-----------------------------------
Q 038577 438 VSLASDQSGE---VICAGTLDSFEIFVWSMKTGRLLDILSGHE-G----------------------------------- 478 (860)
Q Consensus 438 ~~~~~~~~~~---~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-~----------------------------------- 478 (860)
.......+|+ .++.++.++ .++++|..+|+++....-.. .
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G-~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNG-FFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTS-EEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred EEEeeccCCcEEEEEEEECCCC-eEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence 2222223554 677777777 99999999999874432110 0
Q ss_pred ---CeEEEEEcCCCCEEEEEeC---------------------------------------------CCcEEEEEccCCc
Q 038577 479 ---PVHGLVFSPTNATLASSSW---------------------------------------------DKTVRLWNVFEGK 510 (860)
Q Consensus 479 ---~v~~l~~s~~~~~l~s~~~---------------------------------------------dg~i~iwd~~~~~ 510 (860)
.-..++++|+..++++... +|.|..||+.+++
T Consensus 387 Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~ 466 (689)
T 1yiq_A 387 GAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ 466 (689)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE
T ss_pred cccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC
Confidence 0112688998887776532 3779999999998
Q ss_pred ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccc
Q 038577 511 GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRD 562 (860)
Q Consensus 511 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 562 (860)
.......+ .+...-.++..+.++++++.||.++.||.++|+.+..++....
T Consensus 467 ~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 467 AAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG 517 (689)
T ss_dssp EEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC
Confidence 66554433 3344446777888999999999999999999999999887654
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=2.4e-11 Score=123.20 Aligned_cols=227 Identities=12% Similarity=0.070 Sum_probs=159.3
Q ss_pred CcccCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccce
Q 038577 347 GHYFDVNCLAYSPDSQ-LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRN 425 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~ 425 (860)
..........|+|+|+ ++++...++.|..|+. ++. ...+..+...+..++++++|+.+++...++.|..|+.. ++.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 3445577899999998 5666777889999997 444 34555667789999999999866665566789999975 443
Q ss_pred eeEeeCC----CCCcEEEEEECCCCCEEEE----Eec------------CCCeEEEEECCCCceEEEecCcccCeEEEEE
Q 038577 426 FRTFTTP----SSRQFVSLASDQSGEVICA----GTL------------DSFEIFVWSMKTGRLLDILSGHEGPVHGLVF 485 (860)
Q Consensus 426 ~~~~~~~----~~~~~~~~~~~~~~~~l~~----~~~------------~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~ 485 (860)
..+... ....+..++++++|+++++ +.. ..+.|+.||..+++..... .......++|
T Consensus 119 -~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~ 195 (305)
T 3dr2_A 119 -HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAF 195 (305)
T ss_dssp -EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEE
T ss_pred -EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEE
Confidence 222211 1123567899999998875 321 1237889998777765544 4456788999
Q ss_pred cCCCCEEEEEeCC------CcEEEEEccCCccee---EE-cccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeE
Q 038577 486 SPTNATLASSSWD------KTVRLWNVFEGKGSV---ES-FPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMY 555 (860)
Q Consensus 486 s~~~~~l~s~~~d------g~i~iwd~~~~~~~~---~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 555 (860)
+||++.|+.+... +.|.+|++.... +. .+ .........++++++|++. +++.+ .|.+|+. +++.+.
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~-~g~~~~ 271 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDS-DGQLLG 271 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECT-TSCEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECC-CCCEEE
Confidence 9999988877665 689999987653 21 11 1123445678999999944 44444 4999998 577777
Q ss_pred EEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCe
Q 038577 556 TIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKY 604 (860)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~ 604 (860)
.+..+.. +.+++|+++++.|..++.++.
T Consensus 272 ~~~~~~~---------------------~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 272 HIPTPGT---------------------ASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEECSSC---------------------CCEEEECTTSCEEEEEETTEE
T ss_pred EEECCCc---------------------eeEEEEeCCCCEEEEEcCCeE
Confidence 7765432 688999999998888777653
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.43 E-value=2.8e-11 Score=136.20 Aligned_cols=281 Identities=14% Similarity=0.125 Sum_probs=193.2
Q ss_pred CCEEEEEEccCCcEEEEEccCceEEEEecCcccC----------e-EEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 038577 318 GNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFD----------V-NCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVT 386 (860)
Q Consensus 318 ~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~----------v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 386 (860)
+..+++++.+ +.|..+|..+++.+.++...... + ..+++ .+..+++++.|+.|..+|..+|+.+..
T Consensus 70 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPF-SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGG-GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCC-CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeee
Confidence 4555555554 88999999999999887543210 0 11222 356788899999999999999999877
Q ss_pred eecC--CC---ceEEEEEeeCCCEEEEEe------CCCcEEEEEccccceeeEeeCCC-C--------------------
Q 038577 387 FTEH--TN---AVTALHFMANNHSLLSAS------LDGTVRAWDLFRYRNFRTFTTPS-S-------------------- 434 (860)
Q Consensus 387 ~~~~--~~---~v~~i~~~~~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~-~-------------------- 434 (860)
+... .. .+.+.-...++ .++.++ .+|.|..||..+++.+..+.... .
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 7542 11 11110011244 444443 36899999999999887765311 0
Q ss_pred ---------CcEEEEEECCCCCEEEEEecCCC------------------eEEEEECCCCceEEEecC--cc-------c
Q 038577 435 ---------RQFVSLASDQSGEVICAGTLDSF------------------EIFVWSMKTGRLLDILSG--HE-------G 478 (860)
Q Consensus 435 ---------~~~~~~~~~~~~~~l~~~~~~~~------------------~i~v~d~~~~~~~~~~~~--h~-------~ 478 (860)
.....++++|++..++++..++. .|..+|.++|+.+..++. |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 01125788999999999887641 499999999999987764 21 1
Q ss_pred CeEEEEEcCCCC---EEEEEeCCCcEEEEEccCCcceeEEcccC------------------------------------
Q 038577 479 PVHGLVFSPTNA---TLASSSWDKTVRLWNVFEGKGSVESFPHT------------------------------------ 519 (860)
Q Consensus 479 ~v~~l~~s~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------ 519 (860)
++.-.....+|+ .++.++.+|.++++|..+++.+.......
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~ 385 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAF 385 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCT
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCc
Confidence 222222223565 78899999999999999998653221100
Q ss_pred ---CCeEEEEEeeCCCEEEEEeC---------------------------------------------CCeEEEEeCCCC
Q 038577 520 ---HDVLTVVYRPDGRQLACSTL---------------------------------------------DGQIHFWDPLNG 551 (860)
Q Consensus 520 ---~~v~~~~~s~~~~~l~~~~~---------------------------------------------dg~i~iwd~~~~ 551 (860)
..-..++++|+..++++... +|.|+.||+.+|
T Consensus 386 ~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 386 WGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred ccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 00112789998888887632 378999999999
Q ss_pred ceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecc
Q 038577 552 ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITH 623 (860)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~ 623 (860)
+.+..++.+.. ...-.++..|..++.++.||.++.||.++|+.+.+++...
T Consensus 466 ~~~W~~~~~~~---------------------~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~ 516 (689)
T 1yiq_A 466 QAAWEVPYVTI---------------------FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAAS 516 (689)
T ss_dssp EEEEEEEESSS---------------------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CeEeEccCCCC---------------------ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCC
Confidence 99988876543 2233566678899999999999999999999999887654
No 226
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.41 E-value=7.1e-11 Score=134.33 Aligned_cols=240 Identities=12% Similarity=0.083 Sum_probs=165.1
Q ss_pred ceeEEEEEeeCCCEEEEEEccCC----cEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCc----------
Q 038577 307 EKITTAVFNELGNWLVFGCAKLG----QLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNK---------- 372 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g----~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~---------- 372 (860)
..+..++|||||++++++....| .|++||+.+++.+... .+......++|+ ||+.|+.++.+..
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 46788899999999998776544 6999999999865431 111113567899 9999998887743
Q ss_pred ---EEEEECCCCe----eEEEeec-CCCceEEEEEeeCCCEEEEEeC----CCcEEEEEccccc-eeeEeeCCCCCcEEE
Q 038577 373 ---VKVWTVSSGF----CFVTFTE-HTNAVTALHFMANNHSLLSASL----DGTVRAWDLFRYR-NFRTFTTPSSRQFVS 439 (860)
Q Consensus 373 ---i~iwd~~~~~----~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~----dg~i~~wd~~~~~-~~~~~~~~~~~~~~~ 439 (860)
|++|++.++. .+..... |.....++.|+|||++|+.... +..+.++|+.++. ..+.+....... ..
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~-~~ 285 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD-VS 285 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC-EE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce-EE
Confidence 9999988764 2333333 4455788999999998865432 2479999987764 344444443322 22
Q ss_pred EEECCCCCEEEEEecC---CCeEEEEECCCCce--EEEecCcccCeEEEEEcCCCCEEEEEeCCC---cEEEEEccCCcc
Q 038577 440 LASDQSGEVICAGTLD---SFEIFVWSMKTGRL--LDILSGHEGPVHGLVFSPTNATLASSSWDK---TVRLWNVFEGKG 511 (860)
Q Consensus 440 ~~~~~~~~~l~~~~~~---~~~i~v~d~~~~~~--~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg---~i~iwd~~~~~~ 511 (860)
. ++++|..++..+.. .+.|..+|+.++.. ...+..|...+. .|+++++.|+....++ .|++||+..+.
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~- 361 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR- 361 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-
Confidence 2 56677766655443 24899999988754 345555666665 8999999887666543 68899987554
Q ss_pred eeEE-cccCCCeEEEEEeeCCCEEEEEeCC----CeEEEEeCCCCce
Q 038577 512 SVES-FPHTHDVLTVVYRPDGRQLACSTLD----GQIHFWDPLNGEL 553 (860)
Q Consensus 512 ~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~ 553 (860)
...+ ......+..+.++|++..++....+ +.++.||+.+++.
T Consensus 362 ~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 362 VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 3333 2445567788888888877766544 7899999988764
No 227
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.40 E-value=3e-07 Score=101.48 Aligned_cols=471 Identities=8% Similarity=-0.044 Sum_probs=265.7
Q ss_pred CCcEEEEEcccCe--EEEEeecCCceeEEEECCCCCEEEEE--eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEE
Q 038577 73 NQRCHFINLHCHV--VLHRVRFKYPVNAILFSPNGKYIAVG--TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALN 148 (860)
Q Consensus 73 d~~i~vwd~~~~~--~~~~~~~~~~v~~~~fspdg~~la~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 148 (860)
...|+..++.... .......-....+++|++.+..|..+ ..+.|..+++.+... ....+.........++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~------~~~v~~~~~~~P~GlA 90 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES------VQNVVVSGLLSPDGLA 90 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCEEEEE
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc------eEEEEeCCCCCcCeEE
Confidence 4678888887543 22223344567899999977777776 568899998876531 0122233335678999
Q ss_pred EcCCCCeEEEe-ecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcC--CccEEEeeecC
Q 038577 149 WSPDSNYLLVG-SKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIAR--DCYMFSWGFSG 225 (860)
Q Consensus 149 ~s~d~~~l~s~-~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~--dg~i~~w~~~~ 225 (860)
+.+.++.|+.+ ...+.|.+.+++.. .........-.....+++.|.+. +|+.... .+.|...++++
T Consensus 91 vD~~~~~ly~~d~~~~~I~v~~~dG~------~~~~l~~~~l~~P~~Iavdp~~g-----~ly~tD~g~~~~I~r~~~dG 159 (619)
T 3s94_A 91 CDWLGEKLYWTDSETNRIEVSNLDGS------LRKVLFWQELDQPRAIALDPSSG-----FMYWTDWGEVPKIERAGMDG 159 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSC------SCEEEECSSCSCCCCEEEETTTT-----EEEEEECSSSCEEEEEETTS
T ss_pred EEecCCEEEEEeCCCCEEEEEECCCC------CEEEEEeCCCCCCceEEEecCCC-----eEEEeccCCCCEEEEEECCC
Confidence 99966655554 55688999998765 22223334555677889988755 5665543 34555555544
Q ss_pred CCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEE-cCCeEEEEECCCceeEEEEee
Q 038577 226 NDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGF-SNGVFGLYQMPDFVCIHLLSI 304 (860)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~g~i~~~~~~~~~~~~~~~~ 304 (860)
... .............+++++++..|+.+. ..+.|..+++...........
T Consensus 160 ~~~----------------------------~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~ 211 (619)
T 3s94_A 160 SSR----------------------------FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG 211 (619)
T ss_dssp CSC----------------------------EEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-----
T ss_pred Cce----------------------------EEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC
Confidence 211 001111234578899999877776655 457888888864433332221
Q ss_pred cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecC-----------cc--------------cCe--EEE--
Q 038577 305 SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQG-----------HY--------------FDV--NCL-- 355 (860)
Q Consensus 305 ~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~-----------~~--------------~~v--~~~-- 355 (860)
.......+++.. ..+..+...++.|...|..+++....+.. |. +.. .|+
T Consensus 212 ~~~~P~gi~~~~--~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~ 289 (619)
T 3s94_A 212 SLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMS 289 (619)
T ss_dssp ----CCCEEESS--SEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEEC
T ss_pred CCCCceEEEEeC--CEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECC
Confidence 222334556543 47777766668888888766643322110 00 000 111
Q ss_pred -------EEcC-------CC--------CEEEEEeCCCcEEEEECCCCeeE-EEee-cCCCceEEEEEeeCCCEEE-EEe
Q 038577 356 -------AYSP-------DS--------QLLATGADDNKVKVWTVSSGFCF-VTFT-EHTNAVTALHFMANNHSLL-SAS 410 (860)
Q Consensus 356 -------~~s~-------~~--------~~l~~~~~dg~i~iwd~~~~~~~-~~~~-~~~~~v~~i~~~~~~~~l~-s~~ 410 (860)
+..| |+ .+|+.+. .+.|+..++...... ..+. ..-..+.+++|.+.+..|+ +-.
T Consensus 290 ~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~ 368 (619)
T 3s94_A 290 PVKPFYQCACPTGVKLLENGKTCKDGATELLLLAR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDD 368 (619)
T ss_dssp SSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEET
T ss_pred CCCCCceEeCCchheecccCcccCCCCceEEEEEc-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeC
Confidence 1111 11 1333333 346666666544221 1111 1234578899998555555 444
Q ss_pred CCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCC
Q 038577 411 LDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNA 490 (860)
Q Consensus 411 ~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~ 490 (860)
..+.|..+++...... .+..........+++++.+..|+.+....+.|.+.++........+...-....+|++.|...
T Consensus 369 ~~~~I~r~~~~g~~~~-~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G 447 (619)
T 3s94_A 369 EVRAIRRSFIDGSGSQ-FVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVG 447 (619)
T ss_dssp TTTEEEEEETTSCSCE-EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTT
T ss_pred CCCeEEEEEcCCCccE-EEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCC
Confidence 5778888888654332 232222335678999987777777776666999999885543333333456789999999755
Q ss_pred EEEEEeC--CCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeC-CCeEEEEeCCCCceeEEEecccccCCCc
Q 038577 491 TLASSSW--DKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTL-DGQIHFWDPLNGELMYTIEGRRDISGGR 567 (860)
Q Consensus 491 ~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 567 (860)
.|..+.. .+.|...++............-.....+++++++..|+.+.. .+.|..+++........+....
T Consensus 448 ~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l------ 521 (619)
T 3s94_A 448 YMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKI------ 521 (619)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEECCC------
T ss_pred cEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEeccCC------
Confidence 5555543 356777776554322222234566789999998777777754 4679999985443222222111
Q ss_pred cccccccccccCCCCcEEEEEEecCCCEEEEec-CCCeEEEEECCCce
Q 038577 568 LMTDRRSAANSSSGKCFTTLCYSADGSYILAGG-SSKYICMYDVADQV 614 (860)
Q Consensus 568 ~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~-~dg~v~vwd~~~~~ 614 (860)
....+++...+ +|+... ..+.|...|..+|.
T Consensus 522 --------------~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g~ 553 (619)
T 3s94_A 522 --------------PHIFGFTLLGD--YVYWTDWQRRSIERVHKRSAE 553 (619)
T ss_dssp --------------CSSCCEEEETT--EEEEECTTSSCEEEEESSSCC
T ss_pred --------------CCcEEEEEECC--EEEEeecCCCeEEEEEcCCCc
Confidence 01234555433 555444 45678888887773
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=1.6e-10 Score=129.69 Aligned_cols=303 Identities=11% Similarity=0.072 Sum_probs=208.5
Q ss_pred eEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCC-----CCceEEEEecCCCCEEEEE
Q 038577 208 RIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQA-----PSKVTACDYHRGLDMVVVG 282 (860)
Q Consensus 208 ~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~ 282 (860)
.++.++.++.|..+|..++.. .|........... ......+++ ++..++++
T Consensus 79 ~vyv~~~~~~v~AlD~~tG~~----------------------~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~ 134 (677)
T 1kb0_A 79 IMYVSASWSVVHAIDTRTGNR----------------------IWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVG 134 (677)
T ss_dssp EEEEECGGGCEEEEETTTTEE----------------------EEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEE
T ss_pred EEEEECCCCeEEEEECCCCcE----------------------EEEEcCCCCccccccccccCCCCCceE--ECCEEEEE
Confidence 788888899999999988754 6766543211100 000011222 46788999
Q ss_pred EcCCeEEEEECCCceeEEEEeec-C----ceeEEEEEeeCCCEEEEEEcc-----CCcEEEEEccCceEEEEecCcccC-
Q 038577 283 FSNGVFGLYQMPDFVCIHLLSIS-R----EKITTAVFNELGNWLVFGCAK-----LGQLLVWEWRSESYILKQQGHYFD- 351 (860)
Q Consensus 283 ~~~g~i~~~~~~~~~~~~~~~~~-~----~~i~~~~~s~~~~~l~~~~~~-----~g~i~v~d~~~~~~~~~~~~~~~~- 351 (860)
+.++.+..+|..+++.+..+... . ..+...-.. .+..++++... +|.|+.+|..+++.+.++......
T Consensus 135 ~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~ 213 (677)
T 1kb0_A 135 AWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDP 213 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred cCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCc
Confidence 99999999999999999887765 2 122211111 24455555431 489999999999998877432211
Q ss_pred -------------------------------eEEEEEcCCCCEEEEEeCCC-------------------cEEEEECCCC
Q 038577 352 -------------------------------VNCLAYSPDSQLLATGADDN-------------------KVKVWTVSSG 381 (860)
Q Consensus 352 -------------------------------v~~~~~s~~~~~l~~~~~dg-------------------~i~iwd~~~~ 381 (860)
...++++|++..++.+..++ .|..+|..+|
T Consensus 214 ~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG 293 (677)
T 1kb0_A 214 SKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG 293 (677)
T ss_dssp TSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred cccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCC
Confidence 13578889999998887664 4999999999
Q ss_pred eeEEEeecCC---------CceEEEEEeeCC---CEEEEEeCCCcEEEEEccccceeeEeeCCCCC----------cE--
Q 038577 382 FCFVTFTEHT---------NAVTALHFMANN---HSLLSASLDGTVRAWDLFRYRNFRTFTTPSSR----------QF-- 437 (860)
Q Consensus 382 ~~~~~~~~~~---------~~v~~i~~~~~~---~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~----------~~-- 437 (860)
+.+..+.... ....-+....+| ..++.++.+|.+.++|..+++.+..+...... .+
T Consensus 294 ~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~ 373 (677)
T 1kb0_A 294 KYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGI 373 (677)
T ss_dssp CEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEEC
T ss_pred CEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeec
Confidence 9988775421 223333444467 67899999999999999999987766533211 01
Q ss_pred ----------------------EEEEECCCCCEEEEEecC----------------------------------------
Q 038577 438 ----------------------VSLASDQSGEVICAGTLD---------------------------------------- 455 (860)
Q Consensus 438 ----------------------~~~~~~~~~~~l~~~~~~---------------------------------------- 455 (860)
..++++|++.++++...+
T Consensus 374 ~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~ 453 (677)
T 1kb0_A 374 AAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKS 453 (677)
T ss_dssp GGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCS
T ss_pred cccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCC
Confidence 146889998888876431
Q ss_pred --CCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc-cCCCeEEEEEeeCCC
Q 038577 456 --SFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP-HTHDVLTVVYRPDGR 532 (860)
Q Consensus 456 --~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~ 532 (860)
.+.|..||+.+++.+..+. +..++....++.++..++.++.||.+++||..+++.+..+.. +.....-+.|.++|+
T Consensus 454 ~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 454 KPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp CCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCE
Confidence 1489999999999988876 444555566777888899999999999999999997776653 333344566778887
Q ss_pred EEEE
Q 038577 533 QLAC 536 (860)
Q Consensus 533 ~l~~ 536 (860)
.+++
T Consensus 533 ~~v~ 536 (677)
T 1kb0_A 533 QYVS 536 (677)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5544
No 229
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.40 E-value=5.4e-10 Score=114.09 Aligned_cols=222 Identities=14% Similarity=0.056 Sum_probs=153.2
Q ss_pred eEEEEEcCCCC-EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee
Q 038577 352 VNCLAYSPDSQ-LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT 430 (860)
Q Consensus 352 v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 430 (860)
..+.+|+|++. .+++...++.|..||..+++... +. ....+.+++++++++++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 46788999754 55666668899999998776432 32 35679999999999876654 44 59999988776543322
Q ss_pred CC---CCCcEEEEEECCCCCEEEEEecC-----CCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEE-eCCCcE
Q 038577 431 TP---SSRQFVSLASDQSGEVICAGTLD-----SFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASS-SWDKTV 501 (860)
Q Consensus 431 ~~---~~~~~~~~~~~~~~~~l~~~~~~-----~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i 501 (860)
.. ....+..++++|+|++++....+ .+.|+.++ +++... +..+......++|+|+++.++.+ +.++.|
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 21 12357889999999977655421 23677777 455433 32344567899999999877655 456889
Q ss_pred EEEEcc--CC-cc----ee-EEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccc
Q 038577 502 RLWNVF--EG-KG----SV-ESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRR 573 (860)
Q Consensus 502 ~iwd~~--~~-~~----~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 573 (860)
.+||+. ++ .. .. ...........++++++|++.++...++.|.+||. +++.+..+..+..
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~----------- 271 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK----------- 271 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS-----------
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCC-----------
Confidence 999986 44 31 11 11123455788999999988777777789999998 6777766654432
Q ss_pred cccccCCCCcEEEEEEe-cCCCEEEEecC
Q 038577 574 SAANSSSGKCFTTLCYS-ADGSYILAGGS 601 (860)
Q Consensus 574 ~~~~~~~~~~i~~l~~s-~~g~~l~~~~~ 601 (860)
.+++++|+ ++++.|++++.
T Consensus 272 ---------~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 272 ---------QTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ---------BEEEEEEESTTSCEEEEEEB
T ss_pred ---------CcEEEEEecCCCCEEEEEec
Confidence 48999999 89887765543
No 230
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.40 E-value=7.1e-10 Score=113.22 Aligned_cols=224 Identities=12% Similarity=0.041 Sum_probs=154.9
Q ss_pred eeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 038577 308 KITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTF 387 (860)
Q Consensus 308 ~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 387 (860)
-.....|+|++..++.+....+.|..||..+++... +. ....+.+++++++|+++++. . ..|.+||..+++.....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEe
Confidence 346788999888887777766899999998876543 22 34579999999999877654 4 45999999887754332
Q ss_pred ec----CCCceEEEEEeeCCCEEEEEeC------CCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCC
Q 038577 388 TE----HTNAVTALHFMANNHSLLSASL------DGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSF 457 (860)
Q Consensus 388 ~~----~~~~v~~i~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (860)
.. ....+.+++++|+|+.+++... .+.|..++ +++.. .+.. .......++++|+++.++++....+
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFA-DISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEE-EESSEEEEEECTTSCEEEEEETTTC
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeC-CCcccCCeEEcCCCCEEEEEECCCC
Confidence 21 1235889999999987665432 23455555 44332 2221 1224578999999998877765545
Q ss_pred eEEEEECC--CC-ce-----EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEe-
Q 038577 458 EIFVWSMK--TG-RL-----LDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYR- 528 (860)
Q Consensus 458 ~i~v~d~~--~~-~~-----~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s- 528 (860)
.|++||+. ++ +. ...+......+..++++++|.+.++...++.|.+||. +++....+..+...+++++|+
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence 99999986 55 32 2233334456788999999998877777788999998 555445554555679999999
Q ss_pred eCCCEEEEEeCC
Q 038577 529 PDGRQLACSTLD 540 (860)
Q Consensus 529 ~~~~~l~~~~~d 540 (860)
|+++.|++++..
T Consensus 281 ~d~~~L~vt~~~ 292 (326)
T 2ghs_A 281 PDASRLLVTSAR 292 (326)
T ss_dssp TTSCEEEEEEBC
T ss_pred CCCCEEEEEecC
Confidence 888877666543
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.40 E-value=3.2e-11 Score=137.14 Aligned_cols=243 Identities=13% Similarity=0.123 Sum_probs=165.2
Q ss_pred cccCeEEEEEcCCCCEEEEEe-----CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCc--------
Q 038577 348 HYFDVNCLAYSPDSQLLATGA-----DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGT-------- 414 (860)
Q Consensus 348 ~~~~v~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~-------- 414 (860)
+...+..++|||||+++|.+. ....|++||+.+++.+.... +......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 455688899999999988543 23579999999998655321 11113567899 9999998887743
Q ss_pred -----EEEEEcccccee--eEeeCCC--CCcEEEEEECCCCCEEEEEecCC---CeEEEEECCCCc-eEEEecCcccCeE
Q 038577 415 -----VRAWDLFRYRNF--RTFTTPS--SRQFVSLASDQSGEVICAGTLDS---FEIFVWSMKTGR-LLDILSGHEGPVH 481 (860)
Q Consensus 415 -----i~~wd~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~---~~i~v~d~~~~~-~~~~~~~h~~~v~ 481 (860)
|++|++.+.... ..+..+. ......+.++|||++|++....+ ..++++|+.++. ....+..+.....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 999998876542 2222222 23467899999999987755422 389999998764 3455555666655
Q ss_pred EEEEcCCCCEEEEEeC-C---CcEEEEEccCCcc--eeEEcccCCCeEEEEEeeCCCEEEEEeC-CC--eEEEEeCCCCc
Q 038577 482 GLVFSPTNATLASSSW-D---KTVRLWNVFEGKG--SVESFPHTHDVLTVVYRPDGRQLACSTL-DG--QIHFWDPLNGE 552 (860)
Q Consensus 482 ~l~~s~~~~~l~s~~~-d---g~i~iwd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~ 552 (860)
.. ++++|..|+..+. + +.|..+|+.++.. ...+..+...+. .|+++++.|+.... ++ .|++|++..+
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~- 360 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK- 360 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-
Confidence 55 6667766655443 3 5799999987653 245556666665 89999998877654 43 6899998754
Q ss_pred eeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCC----CeEEEEECCCceE
Q 038577 553 LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS----KYICMYDVADQVL 615 (860)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d----g~v~vwd~~~~~~ 615 (860)
....+..... ..+..+.++++++.|+....+ +.+..||+.+++.
T Consensus 361 ~~~~l~~p~~-------------------~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 361 RVREVALPGL-------------------GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEECCSSS-------------------SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred eeEEeecCCC-------------------ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 3344332111 236778888898877655444 8899999988764
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=6.1e-11 Score=122.23 Aligned_cols=236 Identities=13% Similarity=0.132 Sum_probs=159.9
Q ss_pred cCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEEee-------cCCCceEEEEEeeCCCEEEEEeC-----CCcE
Q 038577 350 FDVNCLAYSPDSQLLATGAD--DNKVKVWTVSSGFCFVTFT-------EHTNAVTALHFMANNHSLLSASL-----DGTV 415 (860)
Q Consensus 350 ~~v~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~-------~~~~~v~~i~~~~~~~~l~s~~~-----dg~i 415 (860)
..+..++++++|+.+++... ++.+++|.+.+++. ..+. .+-..+.+++++++++.+++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 56889999999998888642 34345555545543 3221 24567999999999876555433 5789
Q ss_pred EEEEccccceeeEeeCCC-----CCcEEEEEECCCCCEEEEEec---CCCeEEEEECCCCceEEEecCcc----------
Q 038577 416 RAWDLFRYRNFRTFTTPS-----SRQFVSLASDQSGEVICAGTL---DSFEIFVWSMKTGRLLDILSGHE---------- 477 (860)
Q Consensus 416 ~~wd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~---~~~~i~v~d~~~~~~~~~~~~h~---------- 477 (860)
.+||+.+++..+.+..+. ...+..+++++++..++++.. ..+.|.+||+.+++..+.+.+|.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999999888777766532 234578999987666666554 33489999999888777664431
Q ss_pred -------------------cCeEEEEEcCCCCEEEEEeCCC-cEEEEEcc---CCc----c---eeEEcccCCCeEEEEE
Q 038577 478 -------------------GPVHGLVFSPTNATLASSSWDK-TVRLWNVF---EGK----G---SVESFPHTHDVLTVVY 527 (860)
Q Consensus 478 -------------------~~v~~l~~s~~~~~l~s~~~dg-~i~iwd~~---~~~----~---~~~~~~~~~~v~~~~~ 527 (860)
..+..++|+|+++.|+.+..++ .+..++.. .+. . .....++......+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 1358899999999998887766 44444432 110 0 0012233345667999
Q ss_pred eeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeE
Q 038577 528 RPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYI 605 (860)
Q Consensus 528 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v 605 (860)
+++|+++++...++.|.+||..+++......... ...+++++|+++|+++++.+..+.+
T Consensus 256 d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~-------------------~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEK-------------------LSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGG-------------------GSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CCCCCEEEEccCCCeEEEEECCCCCEEEEEECCc-------------------eecCCeeEECCCCcEEEEeCccccc
Confidence 9999999988889999999986676433332211 1247999999999988877655444
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.39 E-value=5.7e-10 Score=113.44 Aligned_cols=223 Identities=13% Similarity=0.176 Sum_probs=160.7
Q ss_pred e--eCCCEEEEEEccCCcEEEEEccCc----eEEEEec-------CcccCeEEEEEcCCCCEEEEEeCC------CcEEE
Q 038577 315 N--ELGNWLVFGCAKLGQLLVWEWRSE----SYILKQQ-------GHYFDVNCLAYSPDSQLLATGADD------NKVKV 375 (860)
Q Consensus 315 s--~~~~~l~~~~~~~g~i~v~d~~~~----~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i 375 (860)
+ ++++++++.+..++.|.++|+.+. +....+. ........+..+|+| .++++..+ |.|.+
T Consensus 90 ~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 90 KPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred CCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 7 889999999999999999999765 5555552 011235567889999 77766555 78999
Q ss_pred EECCCCeeEEEeecCCCc---eEEEEEeeCCCEEEEEe-------------------CCCcEEEEEccccceeeEeeCCC
Q 038577 376 WTVSSGFCFVTFTEHTNA---VTALHFMANNHSLLSAS-------------------LDGTVRAWDLFRYRNFRTFTTPS 433 (860)
Q Consensus 376 wd~~~~~~~~~~~~~~~~---v~~i~~~~~~~~l~s~~-------------------~dg~i~~wd~~~~~~~~~~~~~~ 433 (860)
+|..+++.+.++.....+ -..+.|+|+++.+++.. .+.+|.+||+.+++...++....
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 999999999988633222 34588899999888885 36799999999988888888753
Q ss_pred -CCcEEEEEE--CCCCCEEEEEec-----CCCeEEEEECCCCceE--EEe--cCc----------------ccCeEEEEE
Q 038577 434 -SRQFVSLAS--DQSGEVICAGTL-----DSFEIFVWSMKTGRLL--DIL--SGH----------------EGPVHGLVF 485 (860)
Q Consensus 434 -~~~~~~~~~--~~~~~~l~~~~~-----~~~~i~v~d~~~~~~~--~~~--~~h----------------~~~v~~l~~ 485 (860)
......+.| +|+++++++++. ..++|.+|....++.. +.+ ... ......|.+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 233445555 999999999887 6668887766554321 111 110 234788999
Q ss_pred cCCCCEEEEEeC-CCcEEEEEccCCc---ceeEEcccC--------------CCeEEEEEeeCCCEEEEEe
Q 038577 486 SPTNATLASSSW-DKTVRLWNVFEGK---GSVESFPHT--------------HDVLTVVYRPDGRQLACST 538 (860)
Q Consensus 486 s~~~~~l~s~~~-dg~i~iwd~~~~~---~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~ 538 (860)
||||++|.++.. .+.|.+||+.... ......... .....++++|||++|+++.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999887765 6889999986332 122221110 1358899999999999998
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.39 E-value=6.5e-10 Score=116.63 Aligned_cols=301 Identities=13% Similarity=0.098 Sum_probs=195.9
Q ss_pred eEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeecccc---CCCCceEEEEecCCCCEEEEEEc
Q 038577 208 RIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFS---QAPSKVTACDYHRGLDMVVVGFS 284 (860)
Q Consensus 208 ~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~ 284 (860)
.+++++.++.+..+|..++.. .|......... .....+.+ ....++..+++++.
T Consensus 55 ~v~~~~~~g~v~a~d~~tG~~----------------------~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~ 111 (376)
T 3q7m_A 55 VVYAADRAGLVKALNADDGKE----------------------IWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSE 111 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCE----------------------EEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEET
T ss_pred EEEEEcCCCeEEEEEccCCce----------------------eeeecCccccccccccCccccc-CceEeCCEEEEEcC
Confidence 788899899999999987653 66554321110 00122222 22234668888999
Q ss_pred CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCe-----EEEEEcC
Q 038577 285 NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDV-----NCLAYSP 359 (860)
Q Consensus 285 ~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v-----~~~~~s~ 359 (860)
++.+..+|..+++.................. +..+++++. ++.+..+|..+++.+.......... ......
T Consensus 112 ~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~-~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~- 187 (376)
T 3q7m_A 112 KAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTS-NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA- 187 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-
T ss_pred CCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcC-CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-
Confidence 9999999999999887766554322222222 345555554 4899999999999887765432111 112222
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCc----------e-EEEEEeeCCCEEEEEeCCCcEEEEEccccceeeE
Q 038577 360 DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNA----------V-TALHFMANNHSLLSASLDGTVRAWDLFRYRNFRT 428 (860)
Q Consensus 360 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------v-~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~ 428 (860)
+..++++..++.+..+|..+++.+......... + ..... .+..++.++.++.+..+|..+++....
T Consensus 188 -~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~ 264 (376)
T 3q7m_A 188 -FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNGNLTALDLRSGQIMWK 264 (376)
T ss_dssp -TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTSCEEEEETTTCCEEEE
T ss_pred -CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCcEEEEEECCCCcEEee
Confidence 446788888999999999999888766532110 1 01111 245788888899999999999988766
Q ss_pred eeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEEcc
Q 038577 429 FTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG-HEGPVHGLVFSPTNATLASSSWDKTVRLWNVF 507 (860)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~ 507 (860)
..... ...+.. ++..+++++.++ .+..+|..+++.+..... ....+..... .+..|+.++.+|.+..+|..
T Consensus 265 ~~~~~---~~~~~~--~~~~l~~~~~~g-~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 265 RELGS---VNDFIV--DGNRIYLVDQND-RVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVE 336 (376)
T ss_dssp ECCCC---EEEEEE--ETTEEEEEETTC-CEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred ccCCC---CCCceE--ECCEEEEEcCCC-eEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECC
Confidence 65432 233333 366777777777 899999999998877652 2222333333 35678888999999999999
Q ss_pred CCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEe
Q 038577 508 EGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWD 547 (860)
Q Consensus 508 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 547 (860)
+++...........+.+.... .+..|++++.+|.|+.|+
T Consensus 337 tG~~~~~~~~~~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 337 DGRFVAQQKVDSSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TCCEEEEEECCTTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred CCcEEEEEecCCCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 998665554433333222122 245788889999999987
No 235
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.3e-11 Score=125.82 Aligned_cols=182 Identities=10% Similarity=0.072 Sum_probs=137.8
Q ss_pred ceEEEEEeeCCCEEEEEeCCCcEEEEEccccc---------eeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEE
Q 038577 393 AVTALHFMANNHSLLSASLDGTVRAWDLFRYR---------NFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWS 463 (860)
Q Consensus 393 ~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d 463 (860)
++..+++++....+++|+.+ .+.+|++...+ .......+... +..++| ++.+|+++ .++ .|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~-~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRN-ALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESS-EEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCC-cEEEEE
Confidence 68899999999999999988 56669976544 11111122334 899999 99999999 555 999999
Q ss_pred CCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeE
Q 038577 464 MKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQI 543 (860)
Q Consensus 464 ~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 543 (860)
+.+.........|..++.++.+.+.. +++++.||.+.+||+.++.... +...|++++|||+| ++.|..||.+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 99877766777788889988877553 8889999999999998776432 45689999999999 7889999999
Q ss_pred EEEeCCCCce--eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEe
Q 038577 544 HFWDPLNGEL--MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAG 599 (860)
Q Consensus 544 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~ 599 (860)
++|+...++. ..++....... ....+...|.+++|.+++.++++-
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~-----------~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELE-----------ELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHH-----------TSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEcCCCccccccceecCCcccc-----------cccCCCeeEEEEEEecCCeEEEEE
Confidence 9999887775 55663322110 001123469999999999999873
No 236
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.36 E-value=2.2e-10 Score=116.06 Aligned_cols=237 Identities=12% Similarity=0.003 Sum_probs=159.4
Q ss_pred EEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 038577 300 HLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVS 379 (860)
Q Consensus 300 ~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 379 (860)
..+...........|+++|+.++.+...++.|..|+.. +. ...+..+...+..++++++|+++++...++.|.+|+..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 33444445677899999999888887777999999984 43 23334455678999999999977766666789999976
Q ss_pred CCeeEEEeecC----CCceEEEEEeeCCCEEEE----EeC-------------CCcEEEEEccccceeeEeeCCCCCcEE
Q 038577 380 SGFCFVTFTEH----TNAVTALHFMANNHSLLS----ASL-------------DGTVRAWDLFRYRNFRTFTTPSSRQFV 438 (860)
Q Consensus 380 ~~~~~~~~~~~----~~~v~~i~~~~~~~~l~s----~~~-------------dg~i~~wd~~~~~~~~~~~~~~~~~~~ 438 (860)
++........ ...+.+++++++|+.+++ +.. .+.|..||..+++..... ......
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~ 191 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPN 191 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCc
Confidence 5433222111 234678999999987776 321 245777776555543332 223567
Q ss_pred EEEECCCCCEEEEEecCC-----CeEEEEECCCCceE--EEe-cCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q 038577 439 SLASDQSGEVICAGTLDS-----FEIFVWSMKTGRLL--DIL-SGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGK 510 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~-----~~i~v~d~~~~~~~--~~~-~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 510 (860)
.++++|+++.|+++.... ..|++|++..+... ..+ ....+....++++++|++.++ +.+| |.+|+.. ++
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~g-v~~~~~~-g~ 268 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGTG-VCVFDSD-GQ 268 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSSE-EEEECTT-SC
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCCc-EEEECCC-CC
Confidence 899999999888876651 38999998765421 111 112344567899999995544 4454 9999974 44
Q ss_pred ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEe
Q 038577 511 GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWD 547 (860)
Q Consensus 511 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd 547 (860)
....+..+ ..+.+++|+|+++.|++++.++ +..++
T Consensus 269 ~~~~~~~~-~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 269 LLGHIPTP-GTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEEEEECS-SCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEEEEECC-CceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 34444333 3688999999999998888764 44433
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.34 E-value=1.9e-10 Score=121.32 Aligned_cols=272 Identities=10% Similarity=-0.013 Sum_probs=191.5
Q ss_pred EEEEEcCCeEEEEECCCceeEEEEeecC---------------------------------------ceeEEEEEee---
Q 038577 279 VVVGFSNGVFGLYQMPDFVCIHLLSISR---------------------------------------EKITTAVFNE--- 316 (860)
Q Consensus 279 l~~~~~~g~i~~~~~~~~~~~~~~~~~~---------------------------------------~~i~~~~~s~--- 316 (860)
+.+|+..|.++++-+++++.+..+.... +.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 5678889999999999888777653211 1223355555
Q ss_pred --CCCEEEEEEccCCcEEEEEccCceEEEEecC-cccCeEEEEE-c-CCCCEEEEEe------------------CCCcE
Q 038577 317 --LGNWLVFGCAKLGQLLVWEWRSESYILKQQG-HYFDVNCLAY-S-PDSQLLATGA------------------DDNKV 373 (860)
Q Consensus 317 --~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~-~~~~v~~~~~-s-~~~~~l~~~~------------------~dg~i 373 (860)
||+++.+....++.|.+.|+.+.+....+.- .......+++ + |+++++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 9999999888888999999999987774432 2245778888 5 9999998885 24579
Q ss_pred EEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCC--------------------------------------cE
Q 038577 374 KVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDG--------------------------------------TV 415 (860)
Q Consensus 374 ~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg--------------------------------------~i 415 (860)
.+.|..+.+...++.-.. ....++++|+|+++++.+.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999998888876433 567788999999998888553 35
Q ss_pred EEEEccc--cce-eeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc------------eEEEecCcccCe
Q 038577 416 RAWDLFR--YRN-FRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR------------LLDILSGHEGPV 480 (860)
Q Consensus 416 ~~wd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~------------~~~~~~~h~~~v 480 (860)
.+.|..+ ++. ...+..+ ....++.++|||+++++++....++.++|+.+.+ ...... -....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP 333 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGP 333 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCE
T ss_pred EEEeCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCc
Confidence 5566665 333 3344332 2446789999999999988877799999999653 333333 33457
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccC----------CcceeEEcccCCCe-----EEEEEeeCCCEEEEEeC---CCe
Q 038577 481 HGLVFSPTNATLASSSWDKTVRLWNVFE----------GKGSVESFPHTHDV-----LTVVYRPDGRQLACSTL---DGQ 542 (860)
Q Consensus 481 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v-----~~~~~s~~~~~l~~~~~---dg~ 542 (860)
..++|+|+|...++.--|++|.+||+.. .+.+..+..|-.+- ..+.++|||++|+++.. |+.
T Consensus 334 ~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSS
T ss_pred ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccc
Confidence 8899999994445566799999999977 33333333333221 12355899999999854 332
Q ss_pred ----------EEEEeCCCCcee
Q 038577 543 ----------IHFWDPLNGELM 554 (860)
Q Consensus 543 ----------i~iwd~~~~~~~ 554 (860)
-.++|+..+++.
T Consensus 414 ~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSSCE
T ss_pred ccCCCCCCCcceEEEcCCCcEE
Confidence 288999665543
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.34 E-value=1.5e-09 Score=110.39 Aligned_cols=235 Identities=14% Similarity=0.127 Sum_probs=155.7
Q ss_pred CCCCEEEEE-eCCCcEEEEECCCC----eeEEEee------c-CCCceEEEEEeeCCCEEEEEeCC------CcEEEEEc
Q 038577 359 PDSQLLATG-ADDNKVKVWTVSSG----FCFVTFT------E-HTNAVTALHFMANNHSLLSASLD------GTVRAWDL 420 (860)
Q Consensus 359 ~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~------~-~~~~v~~i~~~~~~~~l~s~~~d------g~i~~wd~ 420 (860)
+++++|++. ..++.|.++|+.+. +...++. . .......+..+|+| .++++..+ |.+.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777777664 45789999998755 5666662 1 12356678889999 66666555 78999999
Q ss_pred cccceeeEeeCCCCCc--EEEEEECCCCCEEEEEec------------------CCCeEEEEECCCCceEEEecCc--cc
Q 038577 421 FRYRNFRTFTTPSSRQ--FVSLASDQSGEVICAGTL------------------DSFEIFVWSMKTGRLLDILSGH--EG 478 (860)
Q Consensus 421 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~------------------~~~~i~v~d~~~~~~~~~~~~h--~~ 478 (860)
.+.+.+..+....... ...+.++|+++.++++.. .+.+|.+||+.+++.+.++..- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999998887543322 335788999998888852 2449999999999888887642 13
Q ss_pred CeEEEEE--cCCCCEEEEEe------CCCcEEEEEccCCccee----EEcc----------------cCCCeEEEEEeeC
Q 038577 479 PVHGLVF--SPTNATLASSS------WDKTVRLWNVFEGKGSV----ESFP----------------HTHDVLTVVYRPD 530 (860)
Q Consensus 479 ~v~~l~~--s~~~~~l~s~~------~dg~i~iwd~~~~~~~~----~~~~----------------~~~~v~~~~~s~~ 530 (860)
....+.| +|+++++..++ .+++|.+|....+.... .+.. .......+.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3455656 99999877766 46688877665432110 0000 0245788999999
Q ss_pred CCEEEEEeC-CCeEEEEeCCC---CceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec
Q 038577 531 GRQLACSTL-DGQIHFWDPLN---GELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG 600 (860)
Q Consensus 531 ~~~l~~~~~-dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~ 600 (860)
|++|+++.. .+.|.+||+.. .+.+..+.....+.. ... .....-......+++||||++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~----~~~--~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHR----ADH--PAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTC----BCC--TTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecc----ccc--cccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999988865 57899999863 344544443211000 000 00000011357899999999999887
No 239
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=3.9e-11 Score=122.41 Aligned_cols=170 Identities=14% Similarity=0.099 Sum_probs=129.7
Q ss_pred CCcEEEe-CCCEEEeeeCCeEEEEECCCCc---------EEe-eccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEccc
Q 038577 15 GGNAVLS-QNTKLISPVGNRVSVTDLIKSK---------TVT-LPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHC 83 (860)
Q Consensus 15 ~~~~~~s-dg~~l~~~~~~~i~v~d~~~~~---------~~~-~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~ 83 (860)
...++++ +.++++++....+++|+++..+ ... ....+.. |++++| |+++|+++ .++.|.+||+.+
T Consensus 40 ~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp CBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSS
T ss_pred ccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchh
Confidence 4569999 9999999999999999976544 111 1224556 999999 99999999 789999999986
Q ss_pred CeEEEEee-cCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecC
Q 038577 84 HVVLHRVR-FKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKD 162 (860)
Q Consensus 84 ~~~~~~~~-~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d 162 (860)
........ +..++.++.+.+.. ++++..+|.+.+||+.++.. .. +...|+|++|||+| ++.|..|
T Consensus 116 l~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~-------~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 116 LSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKST-------KQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp TTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCE-------EE----EEESEEEEEECSSE--EEEEETT
T ss_pred hhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcc-------cc----ccCCceEEEEcCCc--eEEEEcC
Confidence 65444443 67789998888753 44444999999999997762 11 44689999999999 7889999
Q ss_pred CeEEEEeecccccCccccc--ceEe------e---cCCCcEEEEEEccCCCCCccceEEEEc
Q 038577 163 LAVRLFYVKEKLKGIHTNK--PFLL------L---GHRDSVVGCFFSVDKKTDKVNRIYTIA 213 (860)
Q Consensus 163 g~v~vwd~~~~~~~~~~~~--~~~~------~---~h~~~i~~~~~~~~~~~~~~~~l~s~~ 213 (860)
|.+++|+.+.. .. ...+ . +|...|.++.|.+++. ++++-+
T Consensus 182 g~i~~~~~~~~------~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~-----flv~y~ 232 (388)
T 1xip_A 182 RSFQSFAWRNG------EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-----FLAVFG 232 (388)
T ss_dssp SCEEEEEEETT------EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-----EEEEEE
T ss_pred CcEEEEcCCCc------cccccceecCCcccccccCCCeeEEEEEEecCCe-----EEEEEc
Confidence 99999988876 21 2223 2 4789999999999987 666543
No 240
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=5.9e-11 Score=122.39 Aligned_cols=265 Identities=8% Similarity=-0.007 Sum_probs=178.0
Q ss_pred CceEEEEecCCCCEEEEEEc--CCeEEEEECCCceeEEEEe-------ecCceeEEEEEeeCCCEEEEEEcc----CCcE
Q 038577 265 SKVTACDYHRGLDMVVVGFS--NGVFGLYQMPDFVCIHLLS-------ISREKITTAVFNELGNWLVFGCAK----LGQL 331 (860)
Q Consensus 265 ~~v~~~~~~~~~~~l~~~~~--~g~i~~~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~~~~~~----~g~i 331 (860)
..+..++++|+|+.+++... ++.+++|.+.+++. ..+. .+...+..++++++|+..++-... .+.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 46889999999998887542 34244444434442 2221 123578999999998765554331 4789
Q ss_pred EEEEccCceEEEEecCc------ccCeEEEEEcCCCCEE-EEEe---CCCcEEEEECCCCeeEEEeecCCCceE-EEEEe
Q 038577 332 LVWEWRSESYILKQQGH------YFDVNCLAYSPDSQLL-ATGA---DDNKVKVWTVSSGFCFVTFTEHTNAVT-ALHFM 400 (860)
Q Consensus 332 ~v~d~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~v~-~i~~~ 400 (860)
.+||+.+++.+..+... ...+..+++++++..+ ++.. .++.|.+||+.+++..+.+..|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999998876655322 2346889999865454 4444 578999999998887777655432111 14455
Q ss_pred eCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCC---Cc-----eEE-
Q 038577 401 ANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKT---GR-----LLD- 471 (860)
Q Consensus 401 ~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~---~~-----~~~- 471 (860)
+++..+.+.+.++.+..|.. .+..++++|+|+.|+++...+..++.++... +. ...
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~---------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHL---------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK 240 (343)
T ss_dssp ETTEECBEECTTSCEECCCC---------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT
T ss_pred ECCEEEEeccCCCceeceec---------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc
Confidence 67777777788888766532 3578999999999998887776777776421 11 000
Q ss_pred -EecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEc--ccCCCeEEEEEeeCCCEEEEEeCCCeEEEE
Q 038577 472 -ILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESF--PHTHDVLTVVYRPDGRQLACSTLDGQIHFW 546 (860)
Q Consensus 472 -~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 546 (860)
...++.+....++++++|.++++...++.|.+||..+++ ..... .....+.+++|.++++++++.+..+.+.+|
T Consensus 241 ~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 241 IERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred eEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 111344456789999999999998889999999985554 22222 234568999999999887777655444444
No 241
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.31 E-value=3.7e-06 Score=92.78 Aligned_cols=464 Identities=9% Similarity=-0.044 Sum_probs=268.9
Q ss_pred cEEEe-CCCEEEeee--CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEE-cCCCcEEEEEcccCeEEEEe-e
Q 038577 17 NAVLS-QNTKLISPV--GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTV-DENQRCHFINLHCHVVLHRV-R 91 (860)
Q Consensus 17 ~~~~s-dg~~l~~~~--~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~-~~d~~i~vwd~~~~~~~~~~-~ 91 (860)
.++|. +++.|+.+. ++.|..+++.+.....+..........+|+.+.+..|..+ ...+.|.+.++........+ .
T Consensus 41 ~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~ 120 (628)
T 4a0p_A 41 ALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWK 120 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECS
T ss_pred EEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeC
Confidence 57888 666776653 4789999988765544443333567899999877666555 44678999998755332222 2
Q ss_pred cCCceeEEEECCCCCEEEEEe---CCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEee-cCCeEEE
Q 038577 92 FKYPVNAILFSPNGKYIAVGT---GKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGS-KDLAVRL 167 (860)
Q Consensus 92 ~~~~v~~~~fspdg~~la~~~---~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~-~dg~v~v 167 (860)
.-....+|++.|...+|.... .+.|...++.+... ..+...-.....++++++++.|..+. ..+.|..
T Consensus 121 ~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--------~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 121 DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--------TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--------EEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 334568999999666666653 56888888877652 22223445678999999877776664 4577888
Q ss_pred EeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCC--------
Q 038577 168 FYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEP-------- 239 (860)
Q Consensus 168 wd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~-------- 239 (860)
.+++.. .. ..+........++++.. +. ..++-...+.|...|..++.............
T Consensus 193 ~d~dG~------~~-~v~~~~l~~P~glav~~-~~-----ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~ 259 (628)
T 4a0p_A 193 SNMLGL------NR-EVIADDLPHPFGLTQYQ-DY-----IYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHS 259 (628)
T ss_dssp EETTSC------SC-EEEEECCSCEEEEEEET-TE-----EEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECG
T ss_pred EcCCCC------ce-EEeeccCCCceEEEEEC-CE-----EEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeee
Confidence 888765 12 23344445566788765 33 44455557788888765554321111000000
Q ss_pred ------CCCCCCcceeeeEEeeeeccccCCCCceEEEE-----ecCC-------CCEEEEEEcCCeEEEEECCCcee-EE
Q 038577 240 ------PSPGTPERRVKKWGLLRKDDFSQAPSKVTACD-----YHRG-------LDMVVVGFSNGVFGLYQMPDFVC-IH 300 (860)
Q Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~-------~~~l~~~~~~g~i~~~~~~~~~~-~~ 300 (860)
..-..........-+ ....+...|.+ ..++ ..+++.+. ...|+-..+..... ..
T Consensus 260 ~~q~~~n~C~~~ng~C~~~C~------~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~-~~~i~~i~l~~~~~~~~ 332 (628)
T 4a0p_A 260 SRQSGWNECASSNGHCSHLCL------AVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQ-KSAINRMVIDEQQSPDI 332 (628)
T ss_dssp GGSCCCCTTTTTGGGCSSEEE------EETTTEEEEECSTTCEECTTSSCEECCSSEEEEEE-TTEEEEECCCTTCCCCE
T ss_pred cccccceEeccCCCCcchhhh------cCCCCCeeEEcCCCcEecccCCcCccccceeeeec-cceEEEEecccccCceE
Confidence 000000000000000 00001111111 1112 23344333 44565555543221 11
Q ss_pred EEee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecC------cccCeEEEEEcCCCCEEE-EEeCCCc
Q 038577 301 LLSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQG------HYFDVNCLAYSPDSQLLA-TGADDNK 372 (860)
Q Consensus 301 ~~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~-~~~~dg~ 372 (860)
.+.. .-..+..++|.+.+..+..+....+.|+.++.........+.. ....+..+++...++.|. +-+..+.
T Consensus 333 ~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~ 412 (628)
T 4a0p_A 333 ILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNV 412 (628)
T ss_dssp ECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTE
T ss_pred EEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCE
Confidence 2222 2246788999998888888877778898888765432222221 234578999998866554 5556788
Q ss_pred EEEEECCCCeeEEEe-ecCCCceEEEEEee-CCCEEEEEeCCC--cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCE
Q 038577 373 VKVWTVSSGFCFVTF-TEHTNAVTALHFMA-NNHSLLSASLDG--TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEV 448 (860)
Q Consensus 373 i~iwd~~~~~~~~~~-~~~~~~v~~i~~~~-~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (860)
|.+.++. |+....+ ........++++.| .|..+++-.... .|...++. +.....+....-.....+++++++..
T Consensus 413 I~v~~~~-G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d-G~~~~~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 413 INVTRLD-GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD-GTEREVLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp EEEEETT-SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred EEEEECC-CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC-CCCcEEEEeccCCCccEEEEeCCCCE
Confidence 9999986 4444333 33456789999999 454444433332 46555553 44344444434456789999999988
Q ss_pred EEEEecCCCeEEEEECCCCceEEEec-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce
Q 038577 449 ICAGTLDSFEIFVWSMKTGRLLDILS-GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS 512 (860)
Q Consensus 449 l~~~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 512 (860)
|+.+....+.|..+++.... ...+. .......++++.. +..+++-...+.|...|..+++..
T Consensus 491 LYw~D~~~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~ 553 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGR 553 (628)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCC
T ss_pred EEEEeCCCCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCc
Confidence 88887766699999996443 33332 3344566777754 334444444566777776665533
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=2.9e-11 Score=124.55 Aligned_cols=299 Identities=11% Similarity=0.043 Sum_probs=195.0
Q ss_pred ecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccC
Q 038577 272 YHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFD 351 (860)
Q Consensus 272 ~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~ 351 (860)
...++ .+.+++.++.+..|| .+++...........+.++...++|... +++ . + +..+|. +++...........
T Consensus 27 ~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t-~-~-l~~~d~-~g~~~~~~~~~~~~ 99 (330)
T 3hxj_A 27 LAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIY-FGS-D-K-VYAINP-DGTEKWRFDTKKAI 99 (330)
T ss_dssp ECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEEC-CSS-C-E-EEEECC-CGGGGGGSCC----
T ss_pred EccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEE-Eec-C-c-EEEECC-CCcEEEEEECCCCc
Confidence 33444 467777888899999 7888766555544455666666666533 332 2 3 888885 44433222222222
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeC
Q 038577 352 VNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTT 431 (860)
Q Consensus 352 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~ 431 (860)
.....+. +..+.+++.++.+..+|.. ++.......+...+.++...+++. ++.++.++.+..+|.. ++....+..
T Consensus 100 ~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~ 174 (330)
T 3hxj_A 100 VSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT 174 (330)
T ss_dssp -CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC
T ss_pred ccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec
Confidence 2223333 4567788888999999988 777776665555666777776665 6667788999999988 776666554
Q ss_pred CCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcc
Q 038577 432 PSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKG 511 (860)
Q Consensus 432 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 511 (860)
+. ..+.++..++++.+.+.. + .+..+| .+++....+......+.++...++|. +..++.++.+..+|. +++.
T Consensus 175 ~~-~~~~~~~~d~~g~l~v~t---~-~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~ 246 (330)
T 3hxj_A 175 ND-AITSAASIGKDGTIYFGS---D-KVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTE 246 (330)
T ss_dssp SS-CCCSCCEECTTCCEEEES---S-SEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCE
T ss_pred CC-CceeeeEEcCCCEEEEEe---C-EEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCE
Confidence 32 345567777888765544 4 799999 77888777766667788899988876 445666778888874 4444
Q ss_pred eeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEec
Q 038577 512 SVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSA 591 (860)
Q Consensus 512 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 591 (860)
..........+..+.+.+++ .|.+++.+|.|..+|. +++.+..+..... .+.++..++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~--------------------~~~~~~~d~ 304 (330)
T 3hxj_A 247 KWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSW--------------------IIATPVIDE 304 (330)
T ss_dssp EEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSC--------------------CCSCCEECT
T ss_pred eEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCc--------------------cccceEEcC
Confidence 44443333334445565555 5677888889999996 7777766554322 356777778
Q ss_pred CCCEEEEecCCCeEEEEECCCc
Q 038577 592 DGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 592 ~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
+|++ ..++.+|.+++...+..
T Consensus 305 ~g~l-~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 305 NGTI-YFGTRNGKFYALFNLEH 325 (330)
T ss_dssp TCCE-EEECTTSCEEEEEC---
T ss_pred CCEE-EEEcCCCeEEEEecccc
Confidence 8874 55888999988876543
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.28 E-value=5.2e-10 Score=118.10 Aligned_cols=237 Identities=8% Similarity=0.047 Sum_probs=164.5
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEeec---------------------------------C------CCceEEEEEee---
Q 038577 364 LATGADDNKVKVWTVSSGFCFVTFTE---------------------------------H------TNAVTALHFMA--- 401 (860)
Q Consensus 364 l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------------------~------~~~v~~i~~~~--- 401 (860)
+.+|+..|.++++-+.+++.+..+.- + .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 56788889999999888877766521 1 12222345554
Q ss_pred --CCCEEEEEeC-CCcEEEEEccccceeeEeeCCCCCcEEEEEE-C-CCCCEEEEEec-----------------CCCeE
Q 038577 402 --NNHSLLSASL-DGTVRAWDLFRYRNFRTFTTPSSRQFVSLAS-D-QSGEVICAGTL-----------------DSFEI 459 (860)
Q Consensus 402 --~~~~l~s~~~-dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~~~~~-----------------~~~~i 459 (860)
||+++..... ++.|.+.|+.+.++.+.+..+.......+++ + |+++++++++. ..+.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 7877776655 5569999999999998777776667888887 5 99999999852 22389
Q ss_pred EEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCC--------------------------------------cE
Q 038577 460 FVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDK--------------------------------------TV 501 (860)
Q Consensus 460 ~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg--------------------------------------~i 501 (860)
.++|..+.+...++.--. ....++++|+|+++++++.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999999888776322 457788999999999888553 36
Q ss_pred EEEEccC--CcceeEEcccCCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeE--EEecccccCCCcccccccccc
Q 038577 502 RLWNVFE--GKGSVESFPHTHDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGELMY--TIEGRRDISGGRLMTDRRSAA 576 (860)
Q Consensus 502 ~iwd~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 576 (860)
.+.|..+ ++.......-.....++.++|||+++++++ .+.+|.++|+.+.+... .+.... ....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~-----------~v~~ 325 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS-----------AVVA 325 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGG-----------GEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCccc-----------ceEE
Confidence 6777766 332123333344567799999999888775 46789999998653210 000000 0011
Q ss_pred ccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 038577 577 NSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVAD 612 (860)
Q Consensus 577 ~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~ 612 (860)
...-+.....++|+|||...++.--|+.|.+||+++
T Consensus 326 ~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 326 EPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred EcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 112244589999999994444566799999999987
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.23 E-value=3.6e-08 Score=97.37 Aligned_cols=251 Identities=9% Similarity=-0.019 Sum_probs=164.0
Q ss_pred CEEEEEEcCCeEEEEECCCcee-----EEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccC
Q 038577 277 DMVVVGFSNGVFGLYQMPDFVC-----IHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFD 351 (860)
Q Consensus 277 ~~l~~~~~~g~i~~~~~~~~~~-----~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~ 351 (860)
.+|+.+.. +.|+.+++..... ...+......+..+++++++..+.++....+.|..++................
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34555543 4788888764432 11222233467899999998888888877789999998876544333333346
Q ss_pred eEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeC---CCcEEEEEccccceee
Q 038577 352 VNCLAYSPDSQLLATG-ADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASL---DGTVRAWDLFRYRNFR 427 (860)
Q Consensus 352 v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~---dg~i~~wd~~~~~~~~ 427 (860)
...+++++++..++.+ ...+.|.++++..................++++|++..|+.+.. .+.|..+++.. ....
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcE
Confidence 7899999976555554 45678999998754332223222356789999997666655543 36788888753 3333
Q ss_pred EeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEc
Q 038577 428 TFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSS-WDKTVRLWNV 506 (860)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~ 506 (860)
.+..........+++++++..|+++....+.|.++|.........+.+ ......++.. +..+..+. ..+.|..+|.
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence 333233346789999999988888887766999999986544444332 2334567664 45555454 5688999999
Q ss_pred cCCcceeEEcccC-CCeEEEEEeeCCC
Q 038577 507 FEGKGSVESFPHT-HDVLTVVYRPDGR 532 (860)
Q Consensus 507 ~~~~~~~~~~~~~-~~v~~~~~s~~~~ 532 (860)
.+++....+.... .....+++.|++.
T Consensus 237 ~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 237 AISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CCCCceEEEccccccccceeeecCccC
Confidence 8887555554332 2467788888764
No 245
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.22 E-value=9.1e-11 Score=120.81 Aligned_cols=302 Identities=13% Similarity=0.057 Sum_probs=192.1
Q ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeec-CCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEE
Q 038577 55 ICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRF-KYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFEL 133 (860)
Q Consensus 55 v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~-~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~ 133 (860)
..++.+..+|. |.+++.++.|..|| .+++.+..... ...+.++...++|.+.+ +..+ +..+|. +++....
T Consensus 22 ~~~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~-l~~~d~-~g~~~~~---- 92 (330)
T 3hxj_A 22 DSSPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYF-GSDK-VYAINP-DGTEKWR---- 92 (330)
T ss_dssp CCCCEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECC-SSCE-EEEECC-CGGGGGG----
T ss_pred ccCceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEE-ecCc-EEEECC-CCcEEEE----
Confidence 34566666775 55666788999999 88988776653 33457788887876554 4333 888886 4432111
Q ss_pred EEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEc
Q 038577 134 IRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA 213 (860)
Q Consensus 134 ~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~ 213 (860)
+...........+. +..+..++.++.+..+|.. + ........+...+.++...+++ .++.++
T Consensus 93 ---~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g------~~~~~~~~~~~~~~~~~~~~~g------~l~vgt 154 (330)
T 3hxj_A 93 ---FDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-G------TEKWRFKTKKAIYATPIVSEDG------TIYVGS 154 (330)
T ss_dssp ---SCC-----CCEEEE--TTEEEEECTTSEEEEECTT-S------CEEEEEECSSCCCSCCEECTTS------CEEEEC
T ss_pred ---EECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-C------CEEEEEcCCCceeeeeEEcCCC------EEEEEc
Confidence 11111112222333 4567778888999999987 5 2333333344445556666666 577888
Q ss_pred CCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEEC
Q 038577 214 RDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQM 293 (860)
Q Consensus 214 ~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~ 293 (860)
.++.+..++.. +.. .|.... ....+.++...+++.. .+++ +.+..++
T Consensus 155 ~~~~l~~~d~~-g~~----------------------~~~~~~------~~~~~~~~~~d~~g~l-~v~t--~~l~~~d- 201 (330)
T 3hxj_A 155 NDNYLYAINPD-GTE----------------------KWRFKT------NDAITSAASIGKDGTI-YFGS--DKVYAIN- 201 (330)
T ss_dssp TTSEEEEECTT-SCE----------------------EEEEEC------SSCCCSCCEECTTCCE-EEES--SSEEEEC-
T ss_pred CCCEEEEECCC-CCE----------------------eEEEec------CCCceeeeEEcCCCEE-EEEe--CEEEEEC-
Confidence 88999999877 322 343321 1234555666677764 4455 7889999
Q ss_pred CCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcE
Q 038577 294 PDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKV 373 (860)
Q Consensus 294 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 373 (860)
.+++...........+.++...++|...+ ++.+ +.+..++. ++............+.++.+.+++ .|.+++.+|.+
T Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~-~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl 277 (330)
T 3hxj_A 202 PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLD-GHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHL 277 (330)
T ss_dssp TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETT-TEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEE
T ss_pred CCCcEEEEEccCCcceeceEECCCCeEEE-EcCC-CeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCE
Confidence 67777777666666788888888875444 4443 78888874 455555554444444456666566 56677888899
Q ss_pred EEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q 038577 374 KVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR 422 (860)
Q Consensus 374 ~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~ 422 (860)
..+|. +++....+......+.++...+++. |..++.+|.+++.....
T Consensus 278 ~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 278 YAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp EEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred EEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 99996 6777776665566677777767774 67788999998876543
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.20 E-value=3.2e-09 Score=119.18 Aligned_cols=282 Identities=13% Similarity=0.141 Sum_probs=188.5
Q ss_pred CCEEEEEEcCCeEEEEECCCceeEEEEeecCcee-----------EEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEE
Q 038577 276 LDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKI-----------TTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILK 344 (860)
Q Consensus 276 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i-----------~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~ 344 (860)
+..+++++.++.+.-+|..+++.+..+....... ..+++ .+..+++++. ++.|..+|..+++.+.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~-dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTL-DGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECT-TSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcC-CCEEEEEECCCCCEeee
Confidence 5678888899999999999999988776533210 11222 3456666654 49999999999999887
Q ss_pred ecCccc-CeEEEEEcC--CCCEEEEEeC------CCcEEEEECCCCeeEEEeecCC------------------------
Q 038577 345 QQGHYF-DVNCLAYSP--DSQLLATGAD------DNKVKVWTVSSGFCFVTFTEHT------------------------ 391 (860)
Q Consensus 345 ~~~~~~-~v~~~~~s~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~------------------------ 391 (860)
...... ....+..+| .+..++++.. +|.|..+|..+|+.+..+....
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 754210 000011111 1335555543 5899999999999988775311
Q ss_pred -------CceEEEEEeeCCCEEEEEeCCC-------------------cEEEEEccccceeeEeeCCCC--------CcE
Q 038577 392 -------NAVTALHFMANNHSLLSASLDG-------------------TVRAWDLFRYRNFRTFTTPSS--------RQF 437 (860)
Q Consensus 392 -------~~v~~i~~~~~~~~l~s~~~dg-------------------~i~~wd~~~~~~~~~~~~~~~--------~~~ 437 (860)
.....+++.++...++.+..++ .|..+|..+++....+..... .+.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc
Confidence 0112367888878888887765 399999999999888775421 222
Q ss_pred EEEEECCCCC---EEEEEecCCCeEEEEECCCCceEEEecCcc------------cCe----------------------
Q 038577 438 VSLASDQSGE---VICAGTLDSFEIFVWSMKTGRLLDILSGHE------------GPV---------------------- 480 (860)
Q Consensus 438 ~~~~~~~~~~---~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~------------~~v---------------------- 480 (860)
....+..+|+ .+++++.++ .++++|..+|+++...+... .++
T Consensus 303 ~~~d~~~~G~~~~~v~~~~~~G-~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQAPKNG-FFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEETTEEEEEEEECCTTS-EEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred EEEEeccCCcEEEEEEEECCCC-EEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 2233334565 577777777 99999999999885433211 000
Q ss_pred --EEEEEcCCCCEEEEEe------------------------------------CCCcEEEEEccCCcceeEEcccCCCe
Q 038577 481 --HGLVFSPTNATLASSS------------------------------------WDKTVRLWNVFEGKGSVESFPHTHDV 522 (860)
Q Consensus 481 --~~l~~s~~~~~l~s~~------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~v 522 (860)
..++++|+...++... .+|.|..||+.+++....... ..+.
T Consensus 382 ~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~-~~~~ 460 (668)
T 1kv9_A 382 NWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY-PTHW 460 (668)
T ss_dssp CSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE-SSSC
T ss_pred CCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC-CCCC
Confidence 1267788766655421 247899999999986555432 2333
Q ss_pred EEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccc
Q 038577 523 LTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRD 562 (860)
Q Consensus 523 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 562 (860)
....+...+.++++++.||.++.||..+|+.+..++....
T Consensus 461 ~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~ 500 (668)
T 1kv9_A 461 NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSG 500 (668)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCC
Confidence 4445666788999999999999999999999999877543
No 247
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.19 E-value=1.2e-07 Score=93.60 Aligned_cols=237 Identities=11% Similarity=0.034 Sum_probs=151.1
Q ss_pred CEEEEEeCCCcEEEEECCCCee-----EEEeecCCCceEEEEEeeCCCEEE-EEeCCCcEEEEEccccceeeEeeCCCCC
Q 038577 362 QLLATGADDNKVKVWTVSSGFC-----FVTFTEHTNAVTALHFMANNHSLL-SASLDGTVRAWDLFRYRNFRTFTTPSSR 435 (860)
Q Consensus 362 ~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~v~~i~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~ 435 (860)
.+|+.+.. +.|+.+++..... ...+......+.++++++++..|+ +-..++.|..+++....... +......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT-IIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-EECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE-EEECCCC
Confidence 34555544 4788888765432 112222234578999999765555 44457789999987654333 3222234
Q ss_pred cEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC---CCcEEEEEccCCcce
Q 038577 436 QFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW---DKTVRLWNVFEGKGS 512 (860)
Q Consensus 436 ~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~ 512 (860)
....+++++++..++++....+.|.++++..................++++|++..|..+.. .+.|..+++......
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 67899999988888777776669999998754333333322356789999997666655554 367888887654322
Q ss_pred eEEcccCCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEec
Q 038577 513 VESFPHTHDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSA 591 (860)
Q Consensus 513 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 591 (860)
............++++|++..|+.+. ..+.|.++|+........+... .....++..
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~---------------------~~P~gi~~d- 217 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL---------------------QYPFAVTSY- 217 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC---------------------CSEEEEEEE-
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCC---------------------CCceEEEEe-
Confidence 21213335678999999887776665 4578999999754433322211 124566654
Q ss_pred CCCEEEEecCCCeEEEEECCCceEEEEEeec
Q 038577 592 DGSYILAGGSSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 592 ~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
++..+++....+.|.++|..+++.+..+...
T Consensus 218 ~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 218 GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred CCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 3444444446689999999999998877643
No 248
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.19 E-value=7.7e-12 Score=129.93 Aligned_cols=191 Identities=15% Similarity=0.119 Sum_probs=112.6
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEE-
Q 038577 360 DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFV- 438 (860)
Q Consensus 360 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~- 438 (860)
++..+++++.||.|+.||..+|+.+..+.. +.+.+..+..++..+++++.||.++.||..+++....+.......+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999999988875 45555555667777888889999999999888876555432111110
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEccc
Q 038577 439 SLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPH 518 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 518 (860)
+..+. .+..+++++.++ .++.||..+|+.+..+..+. ...++|++..+++++.|+.|+.||..+++........
T Consensus 86 sp~~~-~~~~v~~g~~dg-~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQD-IWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC------CCCCEEEE-EEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceEe-cCCEEEEEeCCC-EEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc
Confidence 00111 345666777777 89999999999988776554 2456678889999999999999999998865444321
Q ss_pred CCCeEEEEEeeCC---CEEEEEeCCCeEEEEeCCCCceeEEEecc
Q 038577 519 THDVLTVVYRPDG---RQLACSTLDGQIHFWDPLNGELMYTIEGR 560 (860)
Q Consensus 519 ~~~v~~~~~s~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 560 (860)
. ....+++++. ..+++++.||.++.||..+|+.+......
T Consensus 160 ~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~ 202 (369)
T 2hz6_A 160 D--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYA 202 (369)
T ss_dssp E--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECS
T ss_pred c--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 1 1223333332 56778889999999999999998877643
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.19 E-value=6e-09 Score=116.92 Aligned_cols=280 Identities=13% Similarity=0.134 Sum_probs=189.7
Q ss_pred CCEEEEEEccCCcEEEEEccCceEEEEecCcccC----------e-EEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE
Q 038577 318 GNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFD----------V-NCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVT 386 (860)
Q Consensus 318 ~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~----------v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 386 (860)
+..+++++.+ +.|..+|..+++.+.++...... + ..+++ .+..+++++.|+.|..+|..+|+.+..
T Consensus 66 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSW-SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGG-GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCC-CeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 4555555554 88999999999998887533210 0 11222 355788889999999999999999887
Q ss_pred eecCC----CceEE-EEEeeCCCEEEEEeC------CCcEEEEEccccceeeEeeCCC--C-------------------
Q 038577 387 FTEHT----NAVTA-LHFMANNHSLLSASL------DGTVRAWDLFRYRNFRTFTTPS--S------------------- 434 (860)
Q Consensus 387 ~~~~~----~~v~~-i~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~--~------------------- 434 (860)
+.... ..+.+ ..+ .++ .++.+.. +|.|..+|..+++.+..+.... .
T Consensus 143 ~~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp EECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred eccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 75421 11111 111 134 4554433 5899999999999988776421 0
Q ss_pred ---------CcEEEEEECCCCCEEEEEecCCC------------------eEEEEECCCCceEEEecC--cc-------c
Q 038577 435 ---------RQFVSLASDQSGEVICAGTLDSF------------------EIFVWSMKTGRLLDILSG--HE-------G 478 (860)
Q Consensus 435 ---------~~~~~~~~~~~~~~l~~~~~~~~------------------~i~v~d~~~~~~~~~~~~--h~-------~ 478 (860)
.....+++++++..++++..++. .|..+|.++|+.+..++. |. .
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~ 300 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ 300 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence 01124688888888888876641 499999999999887764 22 2
Q ss_pred CeEEEEEcCCCC---EEEEEeCCCcEEEEEccCCcceeEEcccC------------CC----------------------
Q 038577 479 PVHGLVFSPTNA---TLASSSWDKTVRLWNVFEGKGSVESFPHT------------HD---------------------- 521 (860)
Q Consensus 479 ~v~~l~~s~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~---------------------- 521 (860)
+.....+..+|+ .++.++.+|.++++|..+++.+....... .+
T Consensus 301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~ 380 (668)
T 1kv9_A 301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (668)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence 333233334665 68889999999999999998653221110 00
Q ss_pred --eEEEEEeeCCCEEEEEe------------------------------------CCCeEEEEeCCCCceeEEEeccccc
Q 038577 522 --VLTVVYRPDGRQLACST------------------------------------LDGQIHFWDPLNGELMYTIEGRRDI 563 (860)
Q Consensus 522 --v~~~~~s~~~~~l~~~~------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~ 563 (860)
-..++++|+..++++.. .+|.|..||+.+|+.+...+....
T Consensus 381 ~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~- 459 (668)
T 1kv9_A 381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH- 459 (668)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS-
T ss_pred cCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC-
Confidence 01267888877766521 237899999999999888765432
Q ss_pred CCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecc
Q 038577 564 SGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITH 623 (860)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~ 623 (860)
.....+...|.++++++.||.++.||..+|+.+.++....
T Consensus 460 --------------------~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 460 --------------------WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp --------------------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred --------------------CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 2333455578899999999999999999999999887653
No 250
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.19 E-value=1.1e-08 Score=97.87 Aligned_cols=219 Identities=12% Similarity=-0.015 Sum_probs=150.5
Q ss_pred eeEEEeecCCC--ceEEEEEeeCCCEEEEEeC--CCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCC
Q 038577 382 FCFVTFTEHTN--AVTALHFMANNHSLLSASL--DGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSF 457 (860)
Q Consensus 382 ~~~~~~~~~~~--~v~~i~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (860)
+.+.++. |.. ....+.|++++..+++.+. ++.|.++|+.+++....+..+.......++++ +..++++....+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCS
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCC
Confidence 3445553 443 3689999998755555553 57999999999999998886654444455554 667777777767
Q ss_pred eEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccC-----CCeEEEEEeeCCC
Q 038577 458 EIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHT-----HDVLTVVYRPDGR 532 (860)
Q Consensus 458 ~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~s~~~~ 532 (860)
.+.++|..+++.+..+..... ....+++||+.++++..++.|.++|..+.+....+.... ..++.+.|. +|+
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 999999999999988863211 124466688877777778999999999887555544221 236788888 776
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEE-EEecCCCeEEEEECC
Q 038577 533 QLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYI-LAGGSSKYICMYDVA 611 (860)
Q Consensus 533 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l-~~~~~dg~v~vwd~~ 611 (860)
..+....++.|.+.|+.+++.+..+........ ..............++|+|+++.| +++...+.|.+.++.
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~-------~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKK-------LIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHH-------HHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccc-------cccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 555555678999999999999999875311000 000000011247999999998755 555577888888875
Q ss_pred Cc
Q 038577 612 DQ 613 (860)
Q Consensus 612 ~~ 613 (860)
..
T Consensus 237 ~~ 238 (266)
T 2iwa_A 237 LV 238 (266)
T ss_dssp EC
T ss_pred cc
Confidence 53
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.14 E-value=2.7e-08 Score=109.15 Aligned_cols=280 Identities=13% Similarity=0.077 Sum_probs=182.9
Q ss_pred CCEEEEEEc-CCeEEEEEC-CCceeEEEEeecCce-e----------EEEEEeeCCCEEEEEEccCCcEEEEEccCceEE
Q 038577 276 LDMVVVGFS-NGVFGLYQM-PDFVCIHLLSISREK-I----------TTAVFNELGNWLVFGCAKLGQLLVWEWRSESYI 342 (860)
Q Consensus 276 ~~~l~~~~~-~g~i~~~~~-~~~~~~~~~~~~~~~-i----------~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~ 342 (860)
+..+++++. ++.+.-+|. .+++.+-........ + ..++. .+..+++++. ++.+..+|..+++.+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~-dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQA-NGHLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECT-TSEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeC-CCEEEEEECCCCCEE
Confidence 556777777 899999999 899998776544321 0 11222 3556666654 499999999999988
Q ss_pred EEecCcc--c--CeEE-EEEcCCCCEEEEEeC------CCcEEEEECCCCeeEEEeecCCCc------------------
Q 038577 343 LKQQGHY--F--DVNC-LAYSPDSQLLATGAD------DNKVKVWTVSSGFCFVTFTEHTNA------------------ 393 (860)
Q Consensus 343 ~~~~~~~--~--~v~~-~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~------------------ 393 (860)
.+..... . .+.+ .... ++ .+++++. ++.|..+|..+|+.+..+......
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 7764321 0 1111 1111 34 5666655 789999999999998776532211
Q ss_pred -------------------e-EEEEEeeCCCEEEEEeCC----------------CcEEEEEccccceeeEeeCCCC---
Q 038577 394 -------------------V-TALHFMANNHSLLSASLD----------------GTVRAWDLFRYRNFRTFTTPSS--- 434 (860)
Q Consensus 394 -------------------v-~~i~~~~~~~~l~s~~~d----------------g~i~~wd~~~~~~~~~~~~~~~--- 434 (860)
+ ..+++.++...++.+..+ +.|..+|..+++....+.....
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0 135566665666665532 2599999999998887765321
Q ss_pred -----CcEEEEEECCCCC---EEEEEecCCCeEEEEECCCCceEEEecCcc-------------cCe-------------
Q 038577 435 -----RQFVSLASDQSGE---VICAGTLDSFEIFVWSMKTGRLLDILSGHE-------------GPV------------- 480 (860)
Q Consensus 435 -----~~~~~~~~~~~~~---~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-------------~~v------------- 480 (860)
.....+....+|+ .++.+..++ .++++|..+|+.+....... .++
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G-~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 375 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNG-ILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKG 375 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTS-EEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCc-EEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCc
Confidence 1112222334674 566677776 99999999999887654221 111
Q ss_pred -------------EEEEEcCCCCEEEEEe-------------------------------------CCCcEEEEEccCCc
Q 038577 481 -------------HGLVFSPTNATLASSS-------------------------------------WDKTVRLWNVFEGK 510 (860)
Q Consensus 481 -------------~~l~~s~~~~~l~s~~-------------------------------------~dg~i~iwd~~~~~ 510 (860)
..++++|+..+++... .+|.|..||..+++
T Consensus 376 ~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~ 455 (571)
T 2ad6_A 376 TNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK 455 (571)
T ss_dssp EEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC
T ss_pred eEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC
Confidence 2357888877776653 34789999999988
Q ss_pred ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccc
Q 038577 511 GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRD 562 (860)
Q Consensus 511 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 562 (860)
....... ...+....+...+..+++++.||.|+.||..+|+.+..++....
T Consensus 456 ~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 456 AKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred EEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 6555432 22333333444667888899999999999999999999876543
No 252
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.10 E-value=5.4e-08 Score=106.33 Aligned_cols=282 Identities=9% Similarity=0.032 Sum_probs=183.2
Q ss_pred CCEEEEEEc-CCeEEEEEC-CCceeEEEEeecCce-----------eEEEEEeeCCCE----EEEEEccCCcEEEEEccC
Q 038577 276 LDMVVVGFS-NGVFGLYQM-PDFVCIHLLSISREK-----------ITTAVFNELGNW----LVFGCAKLGQLLVWEWRS 338 (860)
Q Consensus 276 ~~~l~~~~~-~g~i~~~~~-~~~~~~~~~~~~~~~-----------i~~~~~s~~~~~----l~~~~~~~g~i~v~d~~~ 338 (860)
+..+++++. ++.+.-+|. .+++.+-........ ...++++|.+.. +++++. ++.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECCC
Confidence 567777777 899999999 899998777654321 123455444444 666554 49999999999
Q ss_pred ceEEEEecCccc----CeEE-EEEcCCCCEEEEEe------CCCcEEEEECCCCeeEEEeecCCCc--------------
Q 038577 339 ESYILKQQGHYF----DVNC-LAYSPDSQLLATGA------DDNKVKVWTVSSGFCFVTFTEHTNA-------------- 393 (860)
Q Consensus 339 ~~~~~~~~~~~~----~v~~-~~~s~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~-------------- 393 (860)
++.+.+...... .+.+ ..+. ++ .+++++ .+|.|+.+|..+|+.+-.+......
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 998877643210 1111 1111 34 555555 3789999999999998776532211
Q ss_pred -----------------------e-EEEEEeeCCCEEEEEeCC----------------CcEEEEEccccceeeEeeCCC
Q 038577 394 -----------------------V-TALHFMANNHSLLSASLD----------------GTVRAWDLFRYRNFRTFTTPS 433 (860)
Q Consensus 394 -----------------------v-~~i~~~~~~~~l~s~~~d----------------g~i~~wd~~~~~~~~~~~~~~ 433 (860)
+ ..+++.++...++.+..+ +.|..+|..+++....+....
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0 134566666677777655 379999999999888877643
Q ss_pred CC--------cEEEEEEC-CCC---CEEEEEecCCCeEEEEECCCCceEEEecCcc-------------cCe--------
Q 038577 434 SR--------QFVSLASD-QSG---EVICAGTLDSFEIFVWSMKTGRLLDILSGHE-------------GPV-------- 480 (860)
Q Consensus 434 ~~--------~~~~~~~~-~~~---~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-------------~~v-------- 480 (860)
.. ...-+... .+| ..++.++.++ .++++|.++|+++....... .++
T Consensus 299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G-~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 377 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNG-IVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTR 377 (599)
T ss_dssp TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTS-EEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCC
T ss_pred CccccccCCCccEEEeccccCCcEEEEEEEECCCc-EEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCC
Confidence 21 11112222 567 4566677776 99999999999887654211 111
Q ss_pred ------------------EEEEEcCCCCEEEEEe---------------------------------------CCCcEEE
Q 038577 481 ------------------HGLVFSPTNATLASSS---------------------------------------WDKTVRL 503 (860)
Q Consensus 481 ------------------~~l~~s~~~~~l~s~~---------------------------------------~dg~i~i 503 (860)
..++++|+..++++.. .+|.+..
T Consensus 378 ~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A 457 (599)
T 1w6s_A 378 MDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKA 457 (599)
T ss_dssp TTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEE
T ss_pred CCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEE
Confidence 2356777766654421 3477888
Q ss_pred EEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccc
Q 038577 504 WNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRD 562 (860)
Q Consensus 504 wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 562 (860)
||+.+++....... ..+...-.+...+.+++.++.||.++.||.++|+.+.+++....
T Consensus 458 ~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 458 YNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp ECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred EECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 99988886554432 12222222334677888899999999999999999999876543
No 253
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.10 E-value=1.8e-11 Score=127.05 Aligned_cols=189 Identities=12% Similarity=0.051 Sum_probs=112.5
Q ss_pred CCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccC-e
Q 038577 402 NNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGP-V 480 (860)
Q Consensus 402 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~-v 480 (860)
++..+++++.||.+..||..+++....+.. . .+.+..+..++..+++++.++ .++.||..+|+.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~--~~~s~p~~~~g~~~v~~s~dg-~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D--PVLQVPTHVEEPAFLPDPNDG-SLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C--CSCCCC-----CCEEECTTTC-CEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C--CceecceEcCCCEEEEeCCCC-EEEEEECCCCceeeeeeccCcccc
Confidence 466899999999999999999999888776 2 333444456677777777777 9999999999887666543211 1
Q ss_pred E-EEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEec
Q 038577 481 H-GLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEG 559 (860)
Q Consensus 481 ~-~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 559 (860)
. +..+. ++..+++++.|+.++.||..+++.......+. ...++|++..+++++.|+.|+.||..+|+.+..+..
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 0 01111 34567788889999999999998665544332 245667888999999999999999999998877654
Q ss_pred ccccCCCccccccccccccCCCCcEEEEEEecCC---CEEEEecCCCeEEEEECCCceEEEEEee
Q 038577 560 RRDISGGRLMTDRRSAANSSSGKCFTTLCYSADG---SYILAGGSSKYICMYDVADQVLLRRFQI 621 (860)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g---~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 621 (860)
... ...++++++ ..+++++.+|.|..||..+|+.+.++..
T Consensus 159 ~~~----------------------~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 201 (369)
T 2hz6_A 159 FDY----------------------AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY 201 (369)
T ss_dssp EEE----------------------CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC
T ss_pred ccc----------------------cCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC
Confidence 321 112233322 4566788899999999999998877663
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.09 E-value=1.4e-07 Score=103.41 Aligned_cols=282 Identities=12% Similarity=0.115 Sum_probs=179.3
Q ss_pred CCEEEEEEcCCeEEEEECCCceeEEEEeecCcee---------EEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec
Q 038577 276 LDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKI---------TTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ 346 (860)
Q Consensus 276 ~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i---------~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~ 346 (860)
+..+++++.++.+.-+|..+++.+-.+....... ..+++ .+..+++++.+ +.|..+|.++++.+.+..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~d-g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLD-ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETT-TEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCC-CEEEEEECCCCCEEeeec
Confidence 4567777775569999999999987776543210 11222 35566666554 999999999999988764
Q ss_pred Cccc----CeE-EEEEcC---CCC-EEEEEeC------CCcEEEEECCCCeeEEEeecCCCce-----------------
Q 038577 347 GHYF----DVN-CLAYSP---DSQ-LLATGAD------DNKVKVWTVSSGFCFVTFTEHTNAV----------------- 394 (860)
Q Consensus 347 ~~~~----~v~-~~~~s~---~~~-~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v----------------- 394 (860)
.... .+. ...+.. +|+ .+++++. +|.|..+|..+|+.+-........+
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 3221 111 111111 233 5666543 7899999999999887654321000
Q ss_pred ------------------------EEEEEeeCCCEEEEEeC--------------------C----CcEEEEEcccccee
Q 038577 395 ------------------------TALHFMANNHSLLSASL--------------------D----GTVRAWDLFRYRNF 426 (860)
Q Consensus 395 ------------------------~~i~~~~~~~~l~s~~~--------------------d----g~i~~wd~~~~~~~ 426 (860)
..+++.|+...++.+.. | +.|..+|..+++..
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 12456666666666553 2 57999999999998
Q ss_pred eEeeCCCC--------CcEEEEEEC-CCCC---EEEEEecCCCeEEEEECCCCceEEEecCcc-------------cCe-
Q 038577 427 RTFTTPSS--------RQFVSLASD-QSGE---VICAGTLDSFEIFVWSMKTGRLLDILSGHE-------------GPV- 480 (860)
Q Consensus 427 ~~~~~~~~--------~~~~~~~~~-~~~~---~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~-------------~~v- 480 (860)
..+..... ....-+... .+|+ .++.++.++ .++++|..+|+++..+.... .++
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G-~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNG-FFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTS-EEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCc-eEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 88765321 111112222 5674 667777777 99999999999887654321 000
Q ss_pred -------------------------------EEEEEcCCCCEEEEEe---------------------------------
Q 038577 481 -------------------------------HGLVFSPTNATLASSS--------------------------------- 496 (860)
Q Consensus 481 -------------------------------~~l~~s~~~~~l~s~~--------------------------------- 496 (860)
..++++|+..++++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 1346666655544432
Q ss_pred CCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccc
Q 038577 497 WDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRD 562 (860)
Q Consensus 497 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 562 (860)
.+|.|..||+.+++...+.... .++..-.....+.++++++.||.++.||.++|+.+..++....
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CcceEEEEECCCCCEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 2578999999999865554322 2222222333577888899999999999999999999887554
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.09 E-value=4.6e-08 Score=106.86 Aligned_cols=282 Identities=14% Similarity=0.106 Sum_probs=184.8
Q ss_pred CCEEEEEEccCCcEEEEEc-cCceEEEEecCccc-----------CeEEEEEcCCCCE----EEEEeCCCcEEEEECCCC
Q 038577 318 GNWLVFGCAKLGQLLVWEW-RSESYILKQQGHYF-----------DVNCLAYSPDSQL----LATGADDNKVKVWTVSSG 381 (860)
Q Consensus 318 ~~~l~~~~~~~g~i~v~d~-~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~----l~~~~~dg~i~iwd~~~~ 381 (860)
+..+++++..++.|.-+|. .+++.+.+...... ....++++|.+.. +++++.|+.+..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 4455555441488999999 89998887743221 0123456443444 888889999999999999
Q ss_pred eeEEEeecCCC----ceEE-EEEeeCCCEEEEEe------CCCcEEEEEccccceeeEeeCCCCCc--------------
Q 038577 382 FCFVTFTEHTN----AVTA-LHFMANNHSLLSAS------LDGTVRAWDLFRYRNFRTFTTPSSRQ-------------- 436 (860)
Q Consensus 382 ~~~~~~~~~~~----~v~~-i~~~~~~~~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~~~-------------- 436 (860)
+.+-....... .+.+ ..+ .++ .+++++ .+|.|+.+|..+++.+..+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 98877643220 1211 111 244 455544 37999999999999887776543210
Q ss_pred -----------------------EEEEEECCCCCEEEEEecCC---------------CeEEEEECCCCceEEEecCcc-
Q 038577 437 -----------------------FVSLASDQSGEVICAGTLDS---------------FEIFVWSMKTGRLLDILSGHE- 477 (860)
Q Consensus 437 -----------------------~~~~~~~~~~~~l~~~~~~~---------------~~i~v~d~~~~~~~~~~~~h~- 477 (860)
...+++++....++++..+. ..|.-+|.++|+.+..++...
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 11356777888888877652 379999999999987775422
Q ss_pred ---------cCeEEEEEc-CCC---CEEEEEeCCCcEEEEEccCCcceeEEcccC-------------CCe---------
Q 038577 478 ---------GPVHGLVFS-PTN---ATLASSSWDKTVRLWNVFEGKGSVESFPHT-------------HDV--------- 522 (860)
Q Consensus 478 ---------~~v~~l~~s-~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v--------- 522 (860)
.++. +... .+| +.++.++.+|.++++|..+++.+....... .++
T Consensus 300 d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 300 DEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp CSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred ccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 1221 2222 467 467788899999999999998665433110 111
Q ss_pred -----------------EEEEEeeCCCEEEEEe---------------------------------------CCCeEEEE
Q 038577 523 -----------------LTVVYRPDGRQLACST---------------------------------------LDGQIHFW 546 (860)
Q Consensus 523 -----------------~~~~~s~~~~~l~~~~---------------------------------------~dg~i~iw 546 (860)
..++++|+..++++.. ..|.|..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 2456777776665532 34778889
Q ss_pred eCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecc
Q 038577 547 DPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITH 623 (860)
Q Consensus 547 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~ 623 (860)
|+.+|+.+...+.... ...-.+...+..++.++.||.++.||.++|+.+.+++...
T Consensus 459 D~~tG~~~W~~~~~~~---------------------~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 459 NAITGDYKWEKMERFA---------------------VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp CTTTCCEEEEEEESSC---------------------CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ECCCCCEEeEecCCCC---------------------ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC
Confidence 9999988887754321 1111123357788889999999999999999999887543
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.09 E-value=3.3e-08 Score=108.40 Aligned_cols=279 Identities=16% Similarity=0.099 Sum_probs=183.7
Q ss_pred CCEEEEEEccCCcEEEEEc-cCceEEEEecCccc-C----------eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 038577 318 GNWLVFGCAKLGQLLVWEW-RSESYILKQQGHYF-D----------VNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFV 385 (860)
Q Consensus 318 ~~~l~~~~~~~g~i~v~d~-~~~~~~~~~~~~~~-~----------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 385 (860)
+..+++++..++.|.-+|. .+++.+.+...... . -..+++ .+..+++++.|+.+..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 4445555442488999999 89988887643221 0 011233 35578888889999999999999887
Q ss_pred EeecCCC----ceEE-EEEeeCCCEEEEEeC------CCcEEEEEccccceeeEeeCCCCC-------------------
Q 038577 386 TFTEHTN----AVTA-LHFMANNHSLLSASL------DGTVRAWDLFRYRNFRTFTTPSSR------------------- 435 (860)
Q Consensus 386 ~~~~~~~----~v~~-i~~~~~~~~l~s~~~------dg~i~~wd~~~~~~~~~~~~~~~~------------------- 435 (860)
....... .+.+ ..+ .++ .++.++. ++.|..+|..+++.+..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 7653220 1211 111 144 5555554 789999999999988777643211
Q ss_pred ------------------cEEEEEECCCCCEEEEEecCC---------------CeEEEEECCCCceEEEecC--cc---
Q 038577 436 ------------------QFVSLASDQSGEVICAGTLDS---------------FEIFVWSMKTGRLLDILSG--HE--- 477 (860)
Q Consensus 436 ------------------~~~~~~~~~~~~~l~~~~~~~---------------~~i~v~d~~~~~~~~~~~~--h~--- 477 (860)
....++++++...++++..+. +.|..+|.++|+.+..++. |.
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 002356777777777766421 2699999999999877753 21
Q ss_pred -----cCeEEEEEcCCCC---EEEEEeCCCcEEEEEccCCcceeEEcccC-------------CCe--------------
Q 038577 478 -----GPVHGLVFSPTNA---TLASSSWDKTVRLWNVFEGKGSVESFPHT-------------HDV-------------- 522 (860)
Q Consensus 478 -----~~v~~l~~s~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~v-------------- 522 (860)
.++. +...++|+ .++.++.+|.++++|..+++.+....... .++
T Consensus 298 ~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 298 FAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred cccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 2221 22224674 57788889999999999998655433111 111
Q ss_pred ------------EEEEEeeCCCEEEEEe-------------------------------------CCCeEEEEeCCCCce
Q 038577 523 ------------LTVVYRPDGRQLACST-------------------------------------LDGQIHFWDPLNGEL 553 (860)
Q Consensus 523 ------------~~~~~s~~~~~l~~~~-------------------------------------~dg~i~iwd~~~~~~ 553 (860)
..++++|+..++++.. .+|.|..||+.+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 2467888888777764 347899999999999
Q ss_pred eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeec
Q 038577 554 MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
+.+++.... +....+...+..++.++.||.|+.||..+|+.+.++...
T Consensus 457 ~W~~~~~~~---------------------~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 457 KWTKWEKFA---------------------AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp EEEEEESSC---------------------CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred EEEecCCCC---------------------ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 888765432 122223345677888999999999999999999888753
No 257
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=9.5e-08 Score=89.95 Aligned_cols=203 Identities=13% Similarity=0.130 Sum_probs=140.8
Q ss_pred eEEEeecCCCc--eEEEEEeeCCCEEEEEeCCC--cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCe
Q 038577 383 CFVTFTEHTNA--VTALHFMANNHSLLSASLDG--TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFE 458 (860)
Q Consensus 383 ~~~~~~~~~~~--v~~i~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 458 (860)
.+.++ .|... ...+.|+ ++..+.+.+.+| .|+.+|+.+++..+.+..+....-..+++ ++..|......++.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCE
Confidence 44455 45544 3788888 676777777776 89999999999999888765433333444 46677777776669
Q ss_pred EEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEccc--C---CCeEEEEEeeCCCE
Q 038577 459 IFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPH--T---HDVLTVVYRPDGRQ 533 (860)
Q Consensus 459 i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~---~~v~~~~~s~~~~~ 533 (860)
+.+||..+.+.+.++.... ....+++|++.|+.+..++.|.++|..+.+....+... . ..++.+.|. +|+.
T Consensus 109 v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp EEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE
Confidence 9999999999999887432 22344457877777766788999999988765554421 1 334567776 7766
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecC
Q 038577 534 LACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGS 601 (860)
Q Consensus 534 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~ 601 (860)
.+..-.+..|.+.|..+|+.+..+....-..... .........+.+||+|+++.|++.+.
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~--------~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAG--------PLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSC--------SCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccc--------cccCcCCceEEEEEcCCCCEEEEECC
Confidence 6555568899999999999999987643110000 00112235799999999887776654
No 258
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=1.2e-07 Score=90.74 Aligned_cols=197 Identities=9% Similarity=-0.045 Sum_probs=147.6
Q ss_pred ceEEEEecCCCCEEEEEEc---CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEE
Q 038577 266 KVTACDYHRGLDMVVVGFS---NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYI 342 (860)
Q Consensus 266 ~v~~~~~~~~~~~l~~~~~---~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~ 342 (860)
....+.++|++ .|++++. ++.|.++|+.+++.+..+..... .....+..+++.+..+...++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence 46889999986 5555543 58999999999999988775443 2223344457888888888899999999999988
Q ss_pred EEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCC-----CceEEEEEeeCCCEEEEEeCCCcEEE
Q 038577 343 LKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHT-----NAVTALHFMANNHSLLSASLDGTVRA 417 (860)
Q Consensus 343 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~l~s~~~dg~i~~ 417 (860)
.++...... ...+++||+.++++..++.|.++|..+.+.+..+.-.. ..+..+.|. ++..++....++.|.+
T Consensus 100 ~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 100 KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 887533111 23456688877777778999999999988887775321 236788887 7755555556789999
Q ss_pred EEccccceeeEeeCCC------------CCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC
Q 038577 418 WDLFRYRNFRTFTTPS------------SRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG 467 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~ 467 (860)
.|..+++....+..+. ......++++|+++.+++++.....++..++...
T Consensus 177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999988887531 1356899999999988888776668888887654
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.00 E-value=2.6e-07 Score=101.31 Aligned_cols=280 Identities=13% Similarity=0.097 Sum_probs=179.8
Q ss_pred CCEEEEEEccCCcEEEEEccCceEEEEecCcccC---------eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEee
Q 038577 318 GNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFD---------VNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFT 388 (860)
Q Consensus 318 ~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 388 (860)
+..+++++.. +.|..+|..+++.+.++...... ...+++ .+..+++++.++.+..+|..+|+.+-...
T Consensus 68 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYVTASY-SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEETT-TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEcCC-CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 3445555543 34888999999988877543211 012222 34578888899999999999999987765
Q ss_pred cCCC----ceE-EEEEeeC---CC-EEEEEe------CCCcEEEEEccccceeeEeeCCCC-------------------
Q 038577 389 EHTN----AVT-ALHFMAN---NH-SLLSAS------LDGTVRAWDLFRYRNFRTFTTPSS------------------- 434 (860)
Q Consensus 389 ~~~~----~v~-~i~~~~~---~~-~l~s~~------~dg~i~~wd~~~~~~~~~~~~~~~------------------- 434 (860)
.... .+. ...+..+ ++ .+++++ .++.|..+|..+++.+........
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 4321 111 1112222 33 455554 378999999999988776543210
Q ss_pred ---------------------CcEEEEEECCCCCEEEEEecC------------C-----------CeEEEEECCCCceE
Q 038577 435 ---------------------RQFVSLASDQSGEVICAGTLD------------S-----------FEIFVWSMKTGRLL 470 (860)
Q Consensus 435 ---------------------~~~~~~~~~~~~~~l~~~~~~------------~-----------~~i~v~d~~~~~~~ 470 (860)
.....++++|....++++..+ + +.|.-+|..+|+.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 001235677777888877631 1 38999999999998
Q ss_pred EEecC--cc--------cCeEEEEEc-CCCC---EEEEEeCCCcEEEEEccCCcceeEEcccC-------------CC--
Q 038577 471 DILSG--HE--------GPVHGLVFS-PTNA---TLASSSWDKTVRLWNVFEGKGSVESFPHT-------------HD-- 521 (860)
Q Consensus 471 ~~~~~--h~--------~~v~~l~~s-~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------~~-- 521 (860)
..++. |. .++. +... .+|+ .++.++.+|.++++|..+++.+....... .+
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 383 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVE 383 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEE
T ss_pred EEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeE
Confidence 87753 32 1221 1221 4674 78889999999999999988654433211 00
Q ss_pred ------------------------------eEEEEEeeCCCEEEEEe---------------------------------
Q 038577 522 ------------------------------VLTVVYRPDGRQLACST--------------------------------- 538 (860)
Q Consensus 522 ------------------------------v~~~~~s~~~~~l~~~~--------------------------------- 538 (860)
-..++++|+..++++..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~ 463 (582)
T 1flg_A 384 REGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDD 463 (582)
T ss_dssp CTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSS
T ss_pred ccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCC
Confidence 01346677655555533
Q ss_pred CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEE
Q 038577 539 LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRR 618 (860)
Q Consensus 539 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~ 618 (860)
.+|.|..||+.+|+.+...+..... ..-.....+..++.++.||.++.||.++|+.+.+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~---------------------~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPL---------------------WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCC---------------------CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CcceEEEEECCCCCEEEEecCCCCC---------------------cccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 2578999999999998887654321 1111223467888899999999999999999998
Q ss_pred Eeec
Q 038577 619 FQIT 622 (860)
Q Consensus 619 ~~~~ 622 (860)
++..
T Consensus 523 ~~~~ 526 (582)
T 1flg_A 523 FQTG 526 (582)
T ss_dssp EECS
T ss_pred ecCC
Confidence 8753
No 260
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.99 E-value=0.00019 Score=84.67 Aligned_cols=427 Identities=10% Similarity=0.057 Sum_probs=232.5
Q ss_pred CcEEEEEcccCeEEEEeec--CCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcC
Q 038577 74 QRCHFINLHCHVVLHRVRF--KYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSP 151 (860)
Q Consensus 74 ~~i~vwd~~~~~~~~~~~~--~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~ 151 (860)
..|++.+...+..+..+.. ...|...+.+. .+++.+.++.+.++.+..++. ...... .-...|.|+++.|
T Consensus 492 ~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~g~~l~~fel~~~~L-----~~~~~~-~l~~evscl~i~~ 563 (1158)
T 3ei3_A 492 ASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAVGRALYYLQIHPQEL-----RQISHT-EMEHEVACLDITP 563 (1158)
T ss_dssp SCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEETTEEEEEEEETTEE-----EEEEEE-ECSSCEEEEECCC
T ss_pred CEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEECCEEEEEEeeCCce-----eeeccc-CCCCceEEEEeec
Confidence 3566777665556666653 34677777663 466666678888888775421 112222 2356799999986
Q ss_pred C------CCeEEEeec-CCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeec
Q 038577 152 D------SNYLLVGSK-DLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFS 224 (860)
Q Consensus 152 d------~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~ 224 (860)
. +++++.|.. |++|+|+++... +. .....+. ......++.+..-+. ..+|..+-.||.+..+.++
T Consensus 564 ~~~~~~~s~~~aVg~~~d~tv~I~sL~~l-~~---~~~~~L~-~~~~p~si~l~~~~~---~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 564 LGDSNGLSPLCAIGLWTDISARILKLPSF-EL---LHKEMLG-GEIIPRSILMTTFES---SHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp CSSSTTCCSEEEEEETTTTEEEEEETTTC-CE---EEEEECC-SSCCEEEEEEEEETT---EEEEEEEETTSEEEEEEEC
T ss_pred CCCCcccccEEEEEECCCCEEEEEECCCC-Ce---EEEEECC-CCCCCcEEEEEEeCC---CcEEEEEeCCCeEEEEEEc
Confidence 3 478999986 999999999764 22 1111222 123444544432111 1288999999998877765
Q ss_pred CCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEee
Q 038577 225 GNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSI 304 (860)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~ 304 (860)
..... +.. . +..+-+ ..++.-..+...+..-+.+..+....+|... +... ....
T Consensus 636 ~~tg~-------------------l~d---~-r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~-~s~l 689 (1158)
T 3ei3_A 636 IETGL-------------------LSD---R-KKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLV-FSNV 689 (1158)
T ss_dssp TTTCC-------------------EEE---E-EEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEE-EEEB
T ss_pred CCCCc-------------------ccc---c-eeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceE-Eecc
Confidence 42110 000 0 111111 1233333333334433444444444445432 2211 1122
Q ss_pred cCcee-EEEEEeeC--CCEEEEEEccCCcEEEEEccCce--EEEEecCcccCeEEEEEcCCCCEEEEEeCC---------
Q 038577 305 SREKI-TTAVFNEL--GNWLVFGCAKLGQLLVWEWRSES--YILKQQGHYFDVNCLAYSPDSQLLATGADD--------- 370 (860)
Q Consensus 305 ~~~~i-~~~~~s~~--~~~l~~~~~~~g~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d--------- 370 (860)
....+ ....|+.. .+-++.... +.++|..+.... .+.+++ -...+..++++|+.+.++++..+
T Consensus 690 ~~~~v~~~~~F~se~~~~g~v~~~~--~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~ 766 (1158)
T 3ei3_A 690 NLKEVNYMCPLNSDGYPDSLALANN--STLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGG 766 (1158)
T ss_dssp SSSCCCEEEEECCSSSTTEEEEECS--SCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSS
T ss_pred ChHHhceEeccCcccCCCcEEEEcC--CceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccc
Confidence 22223 23334332 244554433 557777664321 222222 23456777777776655443311
Q ss_pred ----------------------------------------CcEEEEECCCCeeEEEeec-CCCceEEEEEe---eC-CCE
Q 038577 371 ----------------------------------------NKVKVWTVSSGFCFVTFTE-HTNAVTALHFM---AN-NHS 405 (860)
Q Consensus 371 ----------------------------------------g~i~iwd~~~~~~~~~~~~-~~~~v~~i~~~---~~-~~~ 405 (860)
+.|++.|..+.+.+..+.- ....+.+++.. .+ ..+
T Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~ 846 (1158)
T 3ei3_A 767 TTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTY 846 (1158)
T ss_dssp EEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCE
T ss_pred cchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEE
Confidence 2366777766666554432 23345555542 22 357
Q ss_pred EEEEe----------CCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC
Q 038577 406 LLSAS----------LDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG 475 (860)
Q Consensus 406 l~s~~----------~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 475 (860)
++.|. ..|.|.+|++...+.......+....+.+++-- +| +|+++-.. .+++|++...+.+..-..
T Consensus 847 lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~--~l~vy~l~~~~~L~~~~~ 922 (1158)
T 3ei3_A 847 FIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINS--TVRLYEWTTEKELRTECN 922 (1158)
T ss_dssp EEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETT--EEEEEEECTTSCEEEEEE
T ss_pred EEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCC--EEEEEECCCCceEEEEee
Confidence 77765 347899999975544444444445567776643 24 55555433 899999987654441111
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEc---ccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 476 HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESF---PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
+-..|..+.....+.+++.|..-..|.++..+......... .....++++.|-.++ .++.++.+|.+.++..+.
T Consensus 923 ~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 923 HYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp ECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred ccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 12223333333357889999887778776654333222222 366778999887654 677899999999987654
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.91 E-value=1.6e-06 Score=87.29 Aligned_cols=238 Identities=12% Similarity=0.057 Sum_probs=145.1
Q ss_pred eEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCC--cEEE
Q 038577 340 SYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDG--TVRA 417 (860)
Q Consensus 340 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg--~i~~ 417 (860)
+.+..+... .....++|+++|+.+++-..++.|..||.... ....+ .....+..+++.++++.+++..... .|..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEE
Confidence 334444322 45778999999987777667899999997653 33333 2345788999999998666554332 4666
Q ss_pred EEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCce-EEEec---------CcccCeEEEEEcC
Q 038577 418 WDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRL-LDILS---------GHEGPVHGLVFSP 487 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~-~~~~~---------~h~~~v~~l~~s~ 487 (860)
++..+++.......+.......++..+++..+++...++ .|+.+|..+++. +.... +.......+ +|
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g-~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG-AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTT-EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCC-eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 777776654444333333445566666554444333345 999999876532 11111 111234555 78
Q ss_pred CCCEEEEEe-CCCcEEEEEccC-Ccc-eeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccC
Q 038577 488 TNATLASSS-WDKTVRLWNVFE-GKG-SVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDIS 564 (860)
Q Consensus 488 ~~~~l~s~~-~dg~i~iwd~~~-~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 564 (860)
+++.|..+. ..+.|..|++.. +.. .............++++++|++.++....+.|.++|.. ++..........
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~-- 253 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG-- 253 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT--
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc--
Confidence 887665554 567899999875 321 11111112345678999999877776667889999975 655322111111
Q ss_pred CCccccccccccccCCCCcEEEEEEe---cCCCEEEEecCC
Q 038577 565 GGRLMTDRRSAANSSSGKCFTTLCYS---ADGSYILAGGSS 602 (860)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~i~~l~~s---~~g~~l~~~~~d 602 (860)
....++++|. ||++.|++.+..
T Consensus 254 ----------------~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 254 ----------------VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ----------------CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ----------------cCCceEEEEecccCCCCEEEEECCC
Confidence 1247999999 898877766543
No 262
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.89 E-value=2.4e-07 Score=87.15 Aligned_cols=203 Identities=16% Similarity=0.085 Sum_probs=137.2
Q ss_pred eeEEEeecCCCc--eEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeE
Q 038577 382 FCFVTFTEHTNA--VTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEI 459 (860)
Q Consensus 382 ~~~~~~~~~~~~--v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 459 (860)
+.+.++ .|... ...+.|+ ++..+++.+.+|.|+.+|+.+++..+.+ .+.......+++ ++..|......++.+
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEE
Confidence 344455 34443 3688887 4667778888899999999999998888 554333334554 455666666655599
Q ss_pred EEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcc--cC---CCeEEEEEeeCCCEE
Q 038577 460 FVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFP--HT---HDVLTVVYRPDGRQL 534 (860)
Q Consensus 460 ~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~---~~v~~~~~s~~~~~l 534 (860)
.+||.++.+.+.++... ..-..++ +|++.|+.+..++.|.++|..+.+....+.. .. ..++.+.|. +|+..
T Consensus 119 ~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp EEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 99999999999988743 2223444 5788888877789999999999876555442 21 245667777 77655
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec
Q 038577 535 ACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG 600 (860)
Q Consensus 535 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~ 600 (860)
+..-.+..|.+.|..+|+.+..+....-.... ...........+.++++|+++.|++.+
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~-------~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAV-------AGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHH-------TTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccc-------cccccCcCCceEEEEEcCCCCEEEEeC
Confidence 55556889999999999999998765210000 000011223579999999876555444
No 263
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.89 E-value=0.00045 Score=81.62 Aligned_cols=469 Identities=15% Similarity=0.167 Sum_probs=248.9
Q ss_pred EEEeeeCCeEEEEECCCCcEEeecc-CCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEE--EEeecCCceeEEEE
Q 038577 25 KLISPVGNRVSVTDLIKSKTVTLPV-ESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVL--HRVRFKYPVNAILF 101 (860)
Q Consensus 25 ~l~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~--~~~~~~~~v~~~~f 101 (860)
.++=...+.|++.+...+....... .....|.+.+.+. .+++.++ ++.+.++.+..++.. ........|.|+++
T Consensus 485 ~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i 561 (1158)
T 3ei3_A 485 QLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDI 561 (1158)
T ss_dssp EEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEEC
T ss_pred eEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEe
Confidence 3444445668888876654443322 3445677777654 4566664 678888888766432 33336788999999
Q ss_pred CCC------CCEEEEE--eCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEc--CCCCeEEEeecCCeEEEEeec
Q 038577 102 SPN------GKYIAVG--TGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWS--PDSNYLLVGSKDLAVRLFYVK 171 (860)
Q Consensus 102 spd------g~~la~~--~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--~d~~~l~s~~~dg~v~vwd~~ 171 (860)
.|. ++++|+| .++.++|+++++.+. . ....+.. .....++.+. ....+|..|-.||.+..+.++
T Consensus 562 ~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~----~-~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 562 TPLGDSNGLSPLCAIGLWTDISARILKLPSFEL----L-HKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp CCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE----E-EEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred ecCCCCcccccEEEEEECCCCEEEEEECCCCCe----E-EEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 863 4799999 389999999986542 1 1122221 1223333332 234688899999998777765
Q ss_pred ccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeee
Q 038577 172 EKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKK 251 (860)
Q Consensus 172 ~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (860)
.. .+..........| ..++.-..+...+.. .+++++..-.+. +..++ .
T Consensus 636 ~~-tg~l~d~r~~~LG-~~pv~L~~~~~~~~~----~V~a~s~rp~li-y~~~~-------------------------~ 683 (1158)
T 3ei3_A 636 IE-TGLLSDRKKVTLG-TQPTVLRTFRSLSTT----NVFACSDRPTVI-YSSNH-------------------------K 683 (1158)
T ss_dssp TT-TCCEEEEEEEECC-SSCCEEEEEESSSCE----EEEEESSSCEEE-EESSS-------------------------S
T ss_pred CC-CCccccceeEEcC-CCceEEEEEeeCCce----eEEEECCCCEEE-EEcCC-------------------------c
Confidence 43 2111111122333 234443444333321 344444333332 32111 0
Q ss_pred EEeeeeccccCCCCce-EEEEecCC--CCEEEEEEcCCeEEEEECCCcee--EEEEeecCceeEEEEEeeCCCEEEEEEc
Q 038577 252 WGLLRKDDFSQAPSKV-TACDYHRG--LDMVVVGFSNGVFGLYQMPDFVC--IHLLSISREKITTAVFNELGNWLVFGCA 326 (860)
Q Consensus 252 ~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~~~~~~g~i~~~~~~~~~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 326 (860)
+.+.. . ....+ ....|+.. .+-++..+ ++.+++..++.... ++.+... ..+..++++|+.+.++++..
T Consensus 684 l~~s~---l--~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~-~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 684 LVFSN---V--NLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLY-ESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp EEEEE---B--SSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECS-SEEEEEEEEGGGTEEEEEEE
T ss_pred eEEec---c--ChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCC-CCceEEEEcCCCCEEEEEEE
Confidence 11000 0 00112 22233322 23344333 44588877754332 2333332 46778888887776655442
Q ss_pred c------------------------------------------------CCcEEEEEccCceEEEEecC-cccCeEEEE-
Q 038577 327 K------------------------------------------------LGQLLVWEWRSESYILKQQG-HYFDVNCLA- 356 (860)
Q Consensus 327 ~------------------------------------------------~g~i~v~d~~~~~~~~~~~~-~~~~v~~~~- 356 (860)
+ .+.+++.|..+.+.+..+.- ....+.+++
T Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~ 836 (1158)
T 3ei3_A 757 RIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVS 836 (1158)
T ss_dssp EEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEE
T ss_pred eccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEE
Confidence 1 02355666665555444321 222344444
Q ss_pred --EcCC-CCEEEEEe----------CCCcEEEEECCCCeeEEEe-ecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc
Q 038577 357 --YSPD-SQLLATGA----------DDNKVKVWTVSSGFCFVTF-TEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR 422 (860)
Q Consensus 357 --~s~~-~~~l~~~~----------~dg~i~iwd~~~~~~~~~~-~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~ 422 (860)
|..+ ..++++|+ ..|.|.+|++..++..... ....++|++++-- +| +|+++- ..++++|++..
T Consensus 837 v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~ 913 (1158)
T 3ei3_A 837 CKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASI-NSTVRLYEWTT 913 (1158)
T ss_dssp ECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEE-TTEEEEEEECT
T ss_pred EEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEc-CCEEEEEECCC
Confidence 3322 46888886 3578999998754332221 2346788888754 34 444433 46899999976
Q ss_pred cceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEE--EECCCCceEEEec-CcccCeEEEEEcCCCCEEEEEeCCC
Q 038577 423 YRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFV--WSMKTGRLLDILS-GHEGPVHGLVFSPTNATLASSSWDK 499 (860)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v--~d~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~~~dg 499 (860)
.+.++ .....-..+..+.....++++++|..-. .+.+ |+...+++...-+ .+...++++.+-.+ ..++.+..+|
T Consensus 914 ~~~L~-~~~~~~~~i~~~~l~~~~~~I~vgD~~~-Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~g 990 (1158)
T 3ei3_A 914 EKELR-TECNHYNNIMALYLKTKGDFILVGDLMR-SVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAF 990 (1158)
T ss_dssp TSCEE-EEEEECCCSCEEEEEEETTEEEEEESSB-CEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTS
T ss_pred CceEE-EEeeccccEEEEEEeccCCEEEEEEhhh-eEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCC
Confidence 65444 1111111122223334577888887765 4444 5555444443322 24567888888755 4677789999
Q ss_pred cEEEEEccCCc-------ceeE--EcccCCCeEEEE---EeeC---------CCEEEEEeCCCeEEEEe
Q 038577 500 TVRLWNVFEGK-------GSVE--SFPHTHDVLTVV---YRPD---------GRQLACSTLDGQIHFWD 547 (860)
Q Consensus 500 ~i~iwd~~~~~-------~~~~--~~~~~~~v~~~~---~s~~---------~~~l~~~~~dg~i~iwd 547 (860)
.+.+....... .+.. .+.....|+++. +.+. ...++.++.+|.|.+.-
T Consensus 991 Nl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 991 NLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp EEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEE
T ss_pred cEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEE
Confidence 99998765421 1111 112344566664 2222 22466667777776654
No 264
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.87 E-value=1.9e-06 Score=80.47 Aligned_cols=204 Identities=16% Similarity=0.142 Sum_probs=139.1
Q ss_pred eeEEEeecCCC--ceEEEEEeeCCCEEEEEeCCC--cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCC
Q 038577 382 FCFVTFTEHTN--AVTALHFMANNHSLLSASLDG--TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSF 457 (860)
Q Consensus 382 ~~~~~~~~~~~--~v~~i~~~~~~~~l~s~~~dg--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (860)
+.+.++ .|.. -...+.|++ +..+.+.+.+| .|+.+|+.+++..+....+....-..+++. +..|.......+
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCC
Confidence 344455 4543 366888886 55666666654 899999999999999887765433444443 566666666666
Q ss_pred eEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccC-----CCeEEEEEeeCCC
Q 038577 458 EIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHT-----HDVLTVVYRPDGR 532 (860)
Q Consensus 458 ~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~s~~~~ 532 (860)
.+.+||.++.+.+.++.... .-..+ +++++.|+.+..++.|.++|..+.+....+.... ..++.+.+. +|+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~-~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG-EGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEEECCcCcEEEEEeCCC-CceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 99999999999999887433 22344 4577777777778899999999987655544211 345667766 776
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEec
Q 038577 533 QLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGG 600 (860)
Q Consensus 533 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~ 600 (860)
..+..-.+..|.+.|..+|+.+..+....-...... .........+.++++|+++.|++.+
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~-------~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA-------LTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS-------CCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc-------ccCCcCCceEEEEEcCCCCEEEEEC
Confidence 555555678999999999999999886532110000 0011234579999999887666555
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.86 E-value=2e-06 Score=87.55 Aligned_cols=241 Identities=12% Similarity=0.068 Sum_probs=153.6
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeec--------------------CCCceEEEEEee-CCCEEEE
Q 038577 350 FDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTE--------------------HTNAVTALHFMA-NNHSLLS 408 (860)
Q Consensus 350 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------------------~~~~v~~i~~~~-~~~~l~s 408 (860)
....++++.++|+.+.++..++.|..|+..++... .+.. ....+.++++.+ ++ .|+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEE
Confidence 34567889999987888888899999998765433 2211 013578999997 55 4555
Q ss_pred EeCCCcEEEEEccccceeeEeeC----CCCCcEEEEEECC-CCCEEEEEecC----------------CCeEEEEECCCC
Q 038577 409 ASLDGTVRAWDLFRYRNFRTFTT----PSSRQFVSLASDQ-SGEVICAGTLD----------------SFEIFVWSMKTG 467 (860)
Q Consensus 409 ~~~dg~i~~wd~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~l~~~~~~----------------~~~i~v~d~~~~ 467 (860)
+...+.+..+|..++.. ..+.. ........+++++ +|++.++.... .+.++.||..++
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 55555688888765432 22211 1112467899999 99877664321 237999998777
Q ss_pred ceEEEecCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCc--ceeEEcccCCCeEEEEEeeCCCEEEEEeC-----
Q 038577 468 RLLDILSGHEGPVHGLVFSPTNATLASS-SWDKTVRLWNVFEGK--GSVESFPHTHDVLTVVYRPDGRQLACSTL----- 539 (860)
Q Consensus 468 ~~~~~~~~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----- 539 (860)
+...... .......++++|+++.|..+ +..+.|.+|++.... ....+....+ ...++++++|++.++...
T Consensus 176 ~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 176 ETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 6543322 22345679999999876655 456889999987532 1111111223 788999999986666544
Q ss_pred -----CCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECCCc
Q 038577 540 -----DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 540 -----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
.+.|..+|. .++.+..+....... ...++.+++ .+|++.++....+.|..+++...
T Consensus 254 ~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~----------------~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 254 MHGRVDPKGIKFDE-FGNILEVIPLPPPFA----------------GEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TTSCEEEEEEEECT-TSCEEEEEECCTTTT----------------TSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred ccCCCccEEEEECC-CCCEEEEEECCCCCc----------------cccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 467889987 477777665432100 013566666 46766666667888999987643
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.84 E-value=1e-05 Score=82.69 Aligned_cols=244 Identities=10% Similarity=-0.039 Sum_probs=157.4
Q ss_pred eEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec
Q 038577 267 VTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ 346 (860)
Q Consensus 267 v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~ 346 (860)
.+|.+..+ ...|+.+. ...|+..++....... +......+..++|++.+..|..+....+.|..++...........
T Consensus 36 ~~C~~~~~-~~~ll~~~-~~~I~~i~~~g~~~~~-~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 112 (349)
T 3v64_C 36 RSCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTL-LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 112 (349)
T ss_dssp SCEEESSS-CCEEEEEC-BSCEEEECTTSCCEEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred Cccccccc-CceeEeec-ccceEEEeCCCCeeEE-eecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe
Confidence 44555555 33444444 3457888876544433 333445688999999888888887777899999988765444333
Q ss_pred CcccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEe-CC-CcEEEEEcccc
Q 038577 347 GHYFDVNCLAYSPDSQLL-ATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSAS-LD-GTVRAWDLFRY 423 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d-g~i~~wd~~~~ 423 (860)
........+++.+.+..| ++-...+.|.+.++........+...-.....+++.|.+..|+.+. .. +.|..+++...
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 333446789998755555 4555567899999875544444444446789999998665555443 44 67888887543
Q ss_pred ceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEE
Q 038577 424 RNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRL 503 (860)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i 503 (860)
....+..........++++|++..|+.+....+.|..+|+........+.........+++. .+...++-...+.|..
T Consensus 193 -~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~ 270 (349)
T 3v64_C 193 -GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINS 270 (349)
T ss_dssp -SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred -CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEE
Confidence 33333223334578999999888888888777799999987544444444344566778883 4444555555677877
Q ss_pred EEccCCcceeEE
Q 038577 504 WNVFEGKGSVES 515 (860)
Q Consensus 504 wd~~~~~~~~~~ 515 (860)
++..+++....+
T Consensus 271 ~~~~~G~~~~~i 282 (349)
T 3v64_C 271 ANKFTGKNQEII 282 (349)
T ss_dssp EETTTCCSCEEE
T ss_pred EEccCCCccEEe
Confidence 775555544333
No 267
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.82 E-value=0.00056 Score=78.62 Aligned_cols=470 Identities=10% Similarity=0.037 Sum_probs=262.9
Q ss_pred eCCCEEEeeeCCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee-----cCCc
Q 038577 21 SQNTKLISPVGNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR-----FKYP 95 (860)
Q Consensus 21 sdg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~-----~~~~ 95 (860)
.+...|-.+..+.+..||..+.+...........|.++.. .+|. |-.++.+ -+..+|..+++...... ....
T Consensus 71 d~~g~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~ 147 (758)
T 3ott_A 71 IDNTYLYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNT 147 (758)
T ss_dssp ETTTEEEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSC
T ss_pred cCCCcEEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCe
Confidence 3334566666777999999887543321112345777765 4565 4445544 68889987766543211 2346
Q ss_pred eeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEee--c----cCCCeEEEEEcCCCCeEEEeecCCeEEEEe
Q 038577 96 VNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLA--D----CNDKVTALNWSPDSNYLLVGSKDLAVRLFY 169 (860)
Q Consensus 96 v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~--~----h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd 169 (860)
|.++...++|.+.+.. .+-+..++..+++. ..+. . ....|.++...+++..|-.|+. +-+..++
T Consensus 148 i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~--------~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~ 217 (758)
T 3ott_A 148 IYSIIRTKDNQIYVGT-YNGLCRYIPSNGKF--------EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYF 217 (758)
T ss_dssp EEEEEECTTCCEEEEE-TTEEEEEETTTTEE--------EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEE
T ss_pred EEEEEEcCCCCEEEEe-CCCHhhCccCCCce--------EEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEc
Confidence 8888888888776644 45688888776541 1111 1 1224888888877765555554 4577777
Q ss_pred ecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCccee
Q 038577 170 VKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRV 249 (860)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (860)
..+. .. .....+ ....|.++....++. |..++.+| +.+++..+...
T Consensus 218 ~~~~-~~---~~~~~l--~~~~i~~i~~d~~g~------lWigT~~G-l~~~~~~~~~~--------------------- 263 (758)
T 3ott_A 218 PSTG-QI---KQTEAF--HNNSIKSLALDGNGD------LLAGTDNG-LYVYHNDTTPL--------------------- 263 (758)
T ss_dssp TTTT-EE---EEEEEE--EEEEEEEEEECTTCC------EEEEETTE-EEEECCTTSCC---------------------
T ss_pred CCCC-eE---EeccCC--CCCeEEEEEEcCCCC------EEEEeCCc-eeEEecCCCcE---------------------
Confidence 6654 11 011111 234577777776764 55566544 66777654321
Q ss_pred eeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEe-------ecCceeEEEEEeeCCCEEE
Q 038577 250 KKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLS-------ISREKITTAVFNELGNWLV 322 (860)
Q Consensus 250 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~-------~~~~~i~~~~~s~~~~~l~ 322 (860)
..+.........-....|.++....+|. |-+|+..| +.++.... . ...+. .....|.++....+|..-+
T Consensus 264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G-l~~~~~~~-~-~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi 339 (758)
T 3ott_A 264 QHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG-ISLSRYNS-A-LQFIPISQITGTGDGNQFYSLFRDSKGFYWF 339 (758)
T ss_dssp EEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE
T ss_pred EEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-ccccccCC-c-eeEEecccCCCCCCCceEEEEEEcCCCCEEE
Confidence 0000000000011234688888888776 55566667 44443321 1 11111 1123577777777766554
Q ss_pred EEEccCCcEEEEEccCce--EEEEec-------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEee-c---
Q 038577 323 FGCAKLGQLLVWEWRSES--YILKQQ-------GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFT-E--- 389 (860)
Q Consensus 323 ~~~~~~g~i~v~d~~~~~--~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~--- 389 (860)
. +. +-+..++..++. ....+. .....|.++.-.++|.+-+ |+ ++-+..|+..+++...... .
T Consensus 340 G-t~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~ 414 (758)
T 3ott_A 340 G-GA--NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTG 414 (758)
T ss_dssp E-ET--TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC-
T ss_pred e-eC--CcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcC
Confidence 4 33 346666655421 111111 0123588888888886544 55 4579999988775443221 1
Q ss_pred --CCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc-----cee---eEee---CCCCCcEEEEEECCCCCEEEEEecCC
Q 038577 390 --HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY-----RNF---RTFT---TPSSRQFVSLASDQSGEVICAGTLDS 456 (860)
Q Consensus 390 --~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~-----~~~---~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~ 456 (860)
....|.++...+++ .|..|+..+-+..+|..+. ... ..+. .-....+.++..+++|.+.+.++..+
T Consensus 415 ~~~~~~v~~i~~d~~g-~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~ 493 (758)
T 3ott_A 415 TYNTNWTYYIFEDTAG-QLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNK 493 (758)
T ss_dssp -CBSSSEEEEEECTTS-EEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCS
T ss_pred CCCCceEEEEEEcCCC-CEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCC
Confidence 22457888776666 4666776667888886531 111 1111 11223588899999999776433344
Q ss_pred CeEEEEECCCCceEEEecC---cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeE-Ecc-cCCCeEEEEEeeCC
Q 038577 457 FEIFVWSMKTGRLLDILSG---HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVE-SFP-HTHDVLTVVYRPDG 531 (860)
Q Consensus 457 ~~i~v~d~~~~~~~~~~~~---h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~-~~~~v~~~~~s~~~ 531 (860)
-+..+|..+++....... ....+.++....+|.+.+. +..| +..||..+...... ..+ ....|.++... +|
T Consensus 494 -Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g 569 (758)
T 3ott_A 494 -GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG-VMRINPKDESQQSISFGSFSNNEILSMTCV-KN 569 (758)
T ss_dssp -SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE-EEEECC--CCCCBCCCCC---CCEEEEEEE-TT
T ss_pred -CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc-eEEEecCCCceEEecccCCCccceEEEEEC-CC
Confidence 488999887765543211 1346788888888876654 4455 78888765542111 011 23457777664 66
Q ss_pred CEEEEEeCCCeEEEEeCCCCce
Q 038577 532 RQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 532 ~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
+ |..++.+| |..||..+.+.
T Consensus 570 ~-lWi~t~~G-l~~~~~~~~~~ 589 (758)
T 3ott_A 570 S-IWVSTTNG-LWIIDRKTMDA 589 (758)
T ss_dssp E-EEEEESSC-EEEEETTTCCE
T ss_pred C-EEEECCCC-eEEEcCCCcee
Confidence 4 55555666 78889887654
No 268
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.82 E-value=1.6e-06 Score=81.66 Aligned_cols=185 Identities=10% Similarity=-0.019 Sum_probs=137.4
Q ss_pred CceEEEEecCCCCEEEEEEcCC--eEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEE
Q 038577 265 SKVTACDYHRGLDMVVVGFSNG--VFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYI 342 (860)
Q Consensus 265 ~~v~~~~~~~~~~~l~~~~~~g--~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~ 342 (860)
.....+.|+ ++.+..+.+.+| .|+.+|+.+++.+..+.... ........++++.+......++.+.+||.++.+.+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEE
Confidence 345788888 565555555655 89999999999998887654 44444455568888888888899999999999999
Q ss_pred EEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecC--C---CceEEEEEeeCCCEEEEEeCCCcEEE
Q 038577 343 LKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEH--T---NAVTALHFMANNHSLLSASLDGTVRA 417 (860)
Q Consensus 343 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~~v~~i~~~~~~~~l~s~~~dg~i~~ 417 (860)
.++..... ...++++++.|+....++.|.++|..+.+.+..+... . ..+..+.|. +|+..+..-.++.|.+
T Consensus 121 ~ti~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~v 196 (262)
T 3nol_A 121 RSFNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVR 196 (262)
T ss_dssp EEEECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEEECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEE
Confidence 88864322 2233457777777776788999999999888876542 2 234567776 6765555556889999
Q ss_pred EEccccceeeEeeCCC-----------CCcEEEEEECCCCCEEEEEecC
Q 038577 418 WDLFRYRNFRTFTTPS-----------SRQFVSLASDQSGEVICAGTLD 455 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~l~~~~~~ 455 (860)
.|..+++....+.... ..-...++++|+++.|++.+..
T Consensus 197 IDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 197 IDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp ECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999999988887641 2356889999999888887754
No 269
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.82 E-value=5.2e-06 Score=83.59 Aligned_cols=228 Identities=11% Similarity=0.120 Sum_probs=142.5
Q ss_pred ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeE
Q 038577 307 EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDN--KVKVWTVSSGFCF 384 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~ 384 (860)
.....++|+++|+ ++++...++.|..||...... .... ....+..+++.++|+++++..... .|..++..+++..
T Consensus 32 ~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~~~-~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGT-IFVTNHEVGEIVSITPDGNQQ-IHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSC-EEEEETTTTEEEEECTTCCEE-EEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCC-EEEEeCCCCeEEEECCCCceE-EEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 3567899999888 455554558999999876432 2222 234588999999999666554322 4777777777654
Q ss_pred EEeec-CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccce-eeEe--------eCCCCCcEEEEEECCCCCEEEEEec
Q 038577 385 VTFTE-HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRN-FRTF--------TTPSSRQFVSLASDQSGEVICAGTL 454 (860)
Q Consensus 385 ~~~~~-~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~ 454 (860)
..... .......++..+++..+++-..++.|.++|..+++. +... ..........+ +++++.++++..
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 33221 222345555555554455544688888888765421 1100 00111234445 888988888877
Q ss_pred CCCeEEEEECCC-Cce--EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCccee--EEcccCCCeEEEEEe-
Q 038577 455 DSFEIFVWSMKT-GRL--LDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSV--ESFPHTHDVLTVVYR- 528 (860)
Q Consensus 455 ~~~~i~v~d~~~-~~~--~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s- 528 (860)
..+.|+.|++.. ++. ...+. .......++++++|++.++....+.|.++|.. ++... .........++++|.
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 766999999874 332 11221 11345678999999887777778899999975 44321 112233568999999
Q ss_pred --eCCCEEEEEeCCC
Q 038577 529 --PDGRQLACSTLDG 541 (860)
Q Consensus 529 --~~~~~l~~~~~dg 541 (860)
|+++.|++++..+
T Consensus 265 ~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 265 TEGDCTAIYVVTNGG 279 (306)
T ss_dssp STTTTTEEEEEECTT
T ss_pred ccCCCCEEEEECCCC
Confidence 8988888776544
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.76 E-value=9.7e-06 Score=84.24 Aligned_cols=243 Identities=10% Similarity=-0.036 Sum_probs=157.7
Q ss_pred EEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecCc
Q 038577 269 ACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQGH 348 (860)
Q Consensus 269 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~ 348 (860)
|.+..+ ..+|+.+. ...|+.+++......... .....+..++|.+.+..|+.+....+.|..++.............
T Consensus 81 C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 81 CKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEECSS-CCEEEEEC-BSCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred ECCccc-cceeEeec-CccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 333344 33444443 456888888655443333 344568899999988888888777789999998876544443333
Q ss_pred ccCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEe-CC-CcEEEEEccccce
Q 038577 349 YFDVNCLAYSPDSQLL-ATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSAS-LD-GTVRAWDLFRYRN 425 (860)
Q Consensus 349 ~~~v~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~d-g~i~~wd~~~~~~ 425 (860)
......+++.+.+..| ++-...+.|.+.++........+...-.....+++.|.+..|+.+. .. +.|..+++... .
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~ 236 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-G 236 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-S
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-C
Confidence 3445678898765555 4445567888888875544444444446789999998766655544 33 67888877543 3
Q ss_pred eeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 038577 426 FRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWN 505 (860)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd 505 (860)
...+..........++++|++..|+.+....+.|..+|+........+.........+++ ..+..+++-...+.|..++
T Consensus 237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 333333334457899999988888888877779999998755444444434456678888 3445555555677788888
Q ss_pred ccCCcceeEEc
Q 038577 506 VFEGKGSVESF 516 (860)
Q Consensus 506 ~~~~~~~~~~~ 516 (860)
..+++....+.
T Consensus 316 ~~~G~~~~~i~ 326 (386)
T 3v65_B 316 KFTGKNQEIIR 326 (386)
T ss_dssp TTTCCSCEEEE
T ss_pred CCCCcceEEEc
Confidence 66665444433
No 271
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.74 E-value=1.5e-06 Score=81.72 Aligned_cols=184 Identities=9% Similarity=-0.075 Sum_probs=135.4
Q ss_pred CceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEE
Q 038577 265 SKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILK 344 (860)
Q Consensus 265 ~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~ 344 (860)
.....+.|+. +.+..+.+.+|.|+++|+.+++.+..+ ... ........++++.+......++.+.+||.++.+.+.+
T Consensus 55 ~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 55 AFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 3457788873 455556667789999999999998887 443 4444445567778888887889999999999999988
Q ss_pred ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecC--C---CceEEEEEeeCCCEEEEEeCCCcEEEEE
Q 038577 345 QQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEH--T---NAVTALHFMANNHSLLSASLDGTVRAWD 419 (860)
Q Consensus 345 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~---~~v~~i~~~~~~~~l~s~~~dg~i~~wd 419 (860)
+..... -..++ ++++.|+.+..++.|.++|..+.+.+..+.-. . ..+..+.|. +|+..+....+..|.+.|
T Consensus 132 i~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vID 207 (268)
T 3nok_A 132 TRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEID 207 (268)
T ss_dssp EECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEEC
T ss_pred EeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEe
Confidence 864322 23333 57888888888899999999999888877542 2 234667776 676555555678999999
Q ss_pred ccccceeeEeeCC------------CCCcEEEEEECCCCCEEEEEecC
Q 038577 420 LFRYRNFRTFTTP------------SSRQFVSLASDQSGEVICAGTLD 455 (860)
Q Consensus 420 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~ 455 (860)
..+++....+... ...-...++++|+++.|++.+..
T Consensus 208 p~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 208 PATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 9999988877653 22356899999988777666543
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.73 E-value=6.6e-06 Score=83.60 Aligned_cols=237 Identities=10% Similarity=0.002 Sum_probs=146.3
Q ss_pred ceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec-C------------------cccCeEEEEEcC-CCCEEEE
Q 038577 307 EKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ-G------------------HYFDVNCLAYSP-DSQLLAT 366 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~-~------------------~~~~v~~~~~s~-~~~~l~~ 366 (860)
.....+++.++|+.+++.... +.|..|+..++....... . ....+..+++.+ ++ .|++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQD-GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTT-SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEE
T ss_pred CCceEEEEcCCCCEEEEEcCC-CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEE
Confidence 356678889998866665544 889999887754432211 0 113578899998 55 4555
Q ss_pred EeCCCcEEEEECCCCeeEEEeec----CCCceEEEEEee-CCCEEEEEeC-----------------CCcEEEEEccccc
Q 038577 367 GADDNKVKVWTVSSGFCFVTFTE----HTNAVTALHFMA-NNHSLLSASL-----------------DGTVRAWDLFRYR 424 (860)
Q Consensus 367 ~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~i~~~~-~~~~l~s~~~-----------------dg~i~~wd~~~~~ 424 (860)
+...+.+..+|..++........ ....+..+++.+ +|+..++-.. ++.|..||..+++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 55556688888765543221111 123578899999 8876665432 3668888876655
Q ss_pred eeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc--eEEEecCcccCeEEEEEcCCCCEEEEEeC-----
Q 038577 425 NFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR--LLDILSGHEGPVHGLVFSPTNATLASSSW----- 497 (860)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~--~~~~~~~h~~~v~~l~~s~~~~~l~s~~~----- 497 (860)
....... ......++++++|+.++++....+.|++|++.... ....+....+ ...+++.++|++.++...
T Consensus 177 ~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~ 253 (322)
T 2fp8_A 177 TTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGN 253 (322)
T ss_dssp EEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSS
T ss_pred EEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccc
Confidence 3322211 12335789999999887776554499999987531 1122211223 788999999987766544
Q ss_pred -----CCcEEEEEccCCcceeEEccc----CCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 498 -----DKTVRLWNVFEGKGSVESFPH----THDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 498 -----dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
.+.|..+|.. ++....+... ...++.+++ .+++++++...++.|..+++..
T Consensus 254 ~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 254 MHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred ccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4568888864 4434333322 234666766 4666555555678899998753
No 273
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.73 E-value=0.00019 Score=68.84 Aligned_cols=283 Identities=14% Similarity=0.119 Sum_probs=186.8
Q ss_pred cEEEeCCCEEEeee----CCeEEEEECCCCcEE-eeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEee
Q 038577 17 NAVLSQNTKLISPV----GNRVSVTDLIKSKTV-TLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVR 91 (860)
Q Consensus 17 ~~~~sdg~~l~~~~----~~~i~v~d~~~~~~~-~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~ 91 (860)
++.+...++++.-. ++.|.|.|+.++... +.+..-. +.-.+|..+.||.-. ..++.|+|+++.+.+..+.
T Consensus 30 ~lTmESDkyicVrE~~~~~~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~ 104 (365)
T 2xzh_A 30 TLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT 104 (365)
T ss_dssp TEEEEETTEEEEEEEETTEEEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE
T ss_pred eeeeecCceEEEEecCCCCCEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CCeEEEechHHhhhhccee
Confidence 55666556777643 246999999987653 2222222 344689999888755 6789999999999999999
Q ss_pred cCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeecc----CCCeEEEEEcCCCCeEEEeec------
Q 038577 92 FKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADC----NDKVTALNWSPDSNYLLVGSK------ 161 (860)
Q Consensus 92 ~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~s~d~~~l~s~~~------ 161 (860)
...+|..=.|-. .+.|+...+..|+-|++.+... +.+.+..| ...|..-..+++.++++..+-
T Consensus 105 ~~e~VvfWkWis-~~~L~lVT~taVyHWs~~~~s~------P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~ 177 (365)
T 2xzh_A 105 MTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQ------PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNR 177 (365)
T ss_dssp CSSCEEEEEECS-SSEEEEEESSEEEEEESSTTCC------CEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTE
T ss_pred cCCccEEEEecC-CCeEEEEcCCcEEEEcccCCCC------CceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCc
Confidence 888888888864 4577777899999999987443 23334433 345777788999998776542
Q ss_pred -CCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCC---ccEEEeeecCCCCCCccccCCC
Q 038577 162 -DLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARD---CYMFSWGFSGNDGKIDETMEDS 237 (860)
Q Consensus 162 -dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~d---g~i~~w~~~~~~~~~~~~~~~~ 237 (860)
.|.+.+|..+.. ....+.||.+....+.+ +|.......++.+.+. +.+.+-++.....
T Consensus 178 v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~--~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~--------- 239 (365)
T 2xzh_A 178 VVGAMQLYSVDRK-------VSQPIEGHAASFAQFKM--EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPT--------- 239 (365)
T ss_dssp EEEEEEEEETTTT-------EEEEECCSEEEEEEECC--TTCSSCEEEEEEEEEETTEEEEEEEECSSCCT---------
T ss_pred cceeEEEEeeccc-------ccceeeeeeeeeEEEec--CCCCCCceEEEEEEecCCCcEEEEEEcCCCCC---------
Confidence 367888988775 56778888776644433 3332222233333332 5788887754310
Q ss_pred CCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeC
Q 038577 238 EPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNEL 317 (860)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 317 (860)
..... ..+.-++. .......+-..++..++.-..++.-+.-|.+.+||+.++.++..-+...+.|...+....
T Consensus 240 ---~~~~f--~kk~vdi~--fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~ 312 (365)
T 2xzh_A 240 ---GNQPF--PKKAVDVF--FPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 312 (365)
T ss_dssp ---TCCCC--CCEEEEEC--CCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGG
T ss_pred ---CCCCc--ccccceee--CCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCC
Confidence 00000 00111110 111123456788899999999999999999999999999999998888888877776666
Q ss_pred CCEEEEEEccCCcEEEEEcc
Q 038577 318 GNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 318 ~~~l~~~~~~~g~i~v~d~~ 337 (860)
..-++..... |.+.--.++
T Consensus 313 ~~Gi~~Vnr~-GqVl~v~v~ 331 (365)
T 2xzh_A 313 TAGIIGVNRK-GQVLSVCVE 331 (365)
T ss_dssp GTEEEEEETT-CEEEEEEEC
T ss_pred CCcEEEEcCC-CEEEEEEEC
Confidence 5555555543 655544443
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.73 E-value=5.1e-05 Score=76.42 Aligned_cols=231 Identities=10% Similarity=-0.045 Sum_probs=148.4
Q ss_pred EEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccC----ceEEEEecCcccCeEE
Q 038577 279 VVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRS----ESYILKQQGHYFDVNC 354 (860)
Q Consensus 279 l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~----~~~~~~~~~~~~~v~~ 354 (860)
|+.+.. ..|+..++...+....+. .......++|++.+..+..+....+.|..++... ......+.........
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 344333 458888887766554443 3456789999998888888887778999999876 2222222222345678
Q ss_pred EEEcCCCCEE-EEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCC--CcEEEEEccccceeeEeeC
Q 038577 355 LAYSPDSQLL-ATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLD--GTVRAWDLFRYRNFRTFTT 431 (860)
Q Consensus 355 ~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d--g~i~~wd~~~~~~~~~~~~ 431 (860)
+++.+.+..| ++-...+.|.++++........+.........+++.|.+..++.+... +.|..+++. +...+.+..
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEE
Confidence 9998755545 454567899999987544433333344678999999866666555443 678888774 333333433
Q ss_pred CCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec--CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCC
Q 038577 432 PSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS--GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 432 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~ 509 (860)
..-.....+++++++..|+.+....+.|..+|+.......... ........+++. .+..+++-...+.|..++..++
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 3344678999999988888888776699999997533322222 123446778885 3555555556678888887666
Q ss_pred ccee
Q 038577 510 KGSV 513 (860)
Q Consensus 510 ~~~~ 513 (860)
+...
T Consensus 240 ~~~~ 243 (316)
T 1ijq_A 240 SDVN 243 (316)
T ss_dssp CCCE
T ss_pred cceE
Confidence 5433
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=4.2e-05 Score=78.17 Aligned_cols=235 Identities=10% Similarity=-0.056 Sum_probs=152.4
Q ss_pred CEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeEEEeecCCCceEEE
Q 038577 319 NWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATG-ADDNKVKVWTVSSGFCFVTFTEHTNAVTAL 397 (860)
Q Consensus 319 ~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i 397 (860)
.+++++.. ..|+..++........... ...+..++|++.+..|... ...+.|..+++........+.........+
T Consensus 45 ~~ll~~~~--~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gl 121 (349)
T 3v64_C 45 PVLLFANR--IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGL 121 (349)
T ss_dssp CEEEEECB--SCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred ceeEeecc--cceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEE
Confidence 34444433 5678888776655444433 3447899999766666554 457789999988665444443334556789
Q ss_pred EEeeCCCE-EEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC-CeEEEEECCCCceEEEecC
Q 038577 398 HFMANNHS-LLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS-FEIFVWSMKTGRLLDILSG 475 (860)
Q Consensus 398 ~~~~~~~~-l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~i~v~d~~~~~~~~~~~~ 475 (860)
++.+.+.. +++-...+.|.+.++.... ...+..........++++|.+..|+.+.... +.|+.+++...........
T Consensus 122 avd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 200 (349)
T 3v64_C 122 AVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT 200 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS
T ss_pred EEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 99875544 4555567789999886443 3333333344678999999888777776654 5899999875443333333
Q ss_pred cccCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcee
Q 038577 476 HEGPVHGLVFSPTNATLASSS-WDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELM 554 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 554 (860)
.......++++|++..|..+. ..+.|..+|+..................+++ .++....+-...+.|..++..+|+..
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCcc
Confidence 345678999998777766655 4577999998764432223233445677887 35555555556778888887777766
Q ss_pred EEEe
Q 038577 555 YTIE 558 (860)
Q Consensus 555 ~~~~ 558 (860)
..+.
T Consensus 280 ~~i~ 283 (349)
T 3v64_C 280 EIIR 283 (349)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6654
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.71 E-value=9.9e-05 Score=74.30 Aligned_cols=236 Identities=11% Similarity=-0.018 Sum_probs=149.5
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEE-EEeCCCcEEEEEcccc---ceeeEeeCCCCCcEE
Q 038577 363 LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLL-SASLDGTVRAWDLFRY---RNFRTFTTPSSRQFV 438 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~-s~~~dg~i~~wd~~~~---~~~~~~~~~~~~~~~ 438 (860)
+|+.+.. ..|+..|+.+......+. ....+.+++|++.+..|+ +-...+.|..+++... .....+.........
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 3444444 579999998776655443 456688999998665555 4455688999998751 222222222223457
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCC--CcEEEEEccCCcceeEEc
Q 038577 439 SLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWD--KTVRLWNVFEGKGSVESF 516 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~ 516 (860)
.+++++.+..|+.+....+.|.++++........+.........+++.|.+..|..+... +.|...++.... ...+.
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~ 159 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLV 159 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEE
Confidence 889998777777666555599999987554433344344567899999977766655543 678888875443 32222
Q ss_pred -ccCCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCC
Q 038577 517 -PHTHDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGS 594 (860)
Q Consensus 517 -~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~ 594 (860)
..-.....++++|++..|+.+. ..+.|..+|+.... ...+..... .......+++. .+.
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~-----------------~~~~P~giav~-~~~ 220 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEK-----------------RLAHPFSLAVF-EDK 220 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTT-----------------TTSSEEEEEEE-TTE
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCC-----------------ccCCcEEEEEE-CCE
Confidence 3345678999999877777665 45689999987432 233321100 01135777875 455
Q ss_pred EEEEecCCCeEEEEECCCceEEEEEe
Q 038577 595 YILAGGSSKYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 595 ~l~~~~~dg~v~vwd~~~~~~~~~~~ 620 (860)
.+++-...+.|..++..+|+.+..+.
T Consensus 221 ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 221 VFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEEECCCCeEEEEeCCCCcceEEEe
Confidence 55666677899999988887666554
No 277
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=9.3e-06 Score=75.84 Aligned_cols=186 Identities=8% Similarity=-0.044 Sum_probs=135.2
Q ss_pred CCceEEEEecCCCCEEEEEEcC--CeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceE
Q 038577 264 PSKVTACDYHRGLDMVVVGFSN--GVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESY 341 (860)
Q Consensus 264 ~~~v~~~~~~~~~~~l~~~~~~--g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~ 341 (860)
......+.|++ +.+..+.+.. ..|+.+|+.+++.+..+..... ........+++.+......++.+.+||.++.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 34577889986 4444444443 4899999999999988876543 333444556788888887789999999999999
Q ss_pred EEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCC-----CceEEEEEeeCCCEEEEEeCCCcEE
Q 038577 342 ILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHT-----NAVTALHFMANNHSLLSASLDGTVR 416 (860)
Q Consensus 342 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~i~~~~~~~~l~s~~~dg~i~ 416 (860)
+.++..... -..++ +++..|+++..++.|.++|..+.+.+..+.-.. ..+..+.+. +|+.++..-.+..|.
T Consensus 98 ~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 98 RARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 988865332 23444 567777777778999999999998888775422 245566665 666555555677999
Q ss_pred EEEccccceeeEeeCC------------CCCcEEEEEECCCCCEEEEEecC
Q 038577 417 AWDLFRYRNFRTFTTP------------SSRQFVSLASDQSGEVICAGTLD 455 (860)
Q Consensus 417 ~wd~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~ 455 (860)
+.|..+++....+... ...-...++++|+++.|++.+..
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999999988887733 22356899999998888777654
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.69 E-value=3.4e-05 Score=80.15 Aligned_cols=236 Identities=10% Similarity=-0.049 Sum_probs=154.1
Q ss_pred CEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeEEEeecCCCceEEE
Q 038577 319 NWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATG-ADDNKVKVWTVSSGFCFVTFTEHTNAVTAL 397 (860)
Q Consensus 319 ~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i 397 (860)
.+++++.. ..|+.+++........... ...+..++|.+.+..|+.. ...+.|..+++........+.........+
T Consensus 88 ~~l~~~~~--~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~gl 164 (386)
T 3v65_B 88 PVLLFANR--IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGL 164 (386)
T ss_dssp CEEEEECB--SCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCE
T ss_pred ceeEeecC--ccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEE
Confidence 34444433 6788888877655444433 3457899999766555544 457789999988665444444334456788
Q ss_pred EEeeCCCEE-EEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC-CeEEEEECCCCceEEEecC
Q 038577 398 HFMANNHSL-LSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS-FEIFVWSMKTGRLLDILSG 475 (860)
Q Consensus 398 ~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~i~v~d~~~~~~~~~~~~ 475 (860)
++.+.+..| ++-...+.|.+.++.... ...+..........++++|.+..|+.+.... +.|+.+++...........
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 243 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT 243 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC
Confidence 998755444 555566788888875433 3333333345678999999888887776654 5899999875544444433
Q ss_pred cccCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCcee
Q 038577 476 HEGPVHGLVFSPTNATLASSS-WDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELM 554 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~ 554 (860)
.......|+++|++..|..+. ..+.|..+|+..................+++ .++.++.+-...+.|..++..+|+..
T Consensus 244 ~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 244 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcce
Confidence 445678999998777666554 4577999998654433223333445677888 45555556566788999997788776
Q ss_pred EEEec
Q 038577 555 YTIEG 559 (860)
Q Consensus 555 ~~~~~ 559 (860)
..+..
T Consensus 323 ~~i~~ 327 (386)
T 3v65_B 323 EIIRN 327 (386)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 66653
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.69 E-value=0.00011 Score=76.71 Aligned_cols=241 Identities=9% Similarity=-0.059 Sum_probs=155.9
Q ss_pred EEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc----eEEEEecCcccCeEEEEE
Q 038577 282 GFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE----SYILKQQGHYFDVNCLAY 357 (860)
Q Consensus 282 ~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~----~~~~~~~~~~~~v~~~~~ 357 (860)
-.....|+..++......... .....+..++|++.+..|..+....+.|..+++... ...............+++
T Consensus 88 ~~~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 88 FTNRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp EEETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred EeccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 334578888888765444333 345678899999988888888777788999988752 222233334456788999
Q ss_pred cCCCC-EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeC--CCcEEEEEccccceeeEeeCCCC
Q 038577 358 SPDSQ-LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASL--DGTVRAWDLFRYRNFRTFTTPSS 434 (860)
Q Consensus 358 s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~ 434 (860)
.+.+. +.++-...+.|.+.++........+...-.....+++.|.+..|+.+.. .+.|...++... ....+....-
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-~~~~~~~~~l 245 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENI 245 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-SCEEEECSSC
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-ccEEEEECCC
Confidence 88444 4455556788999998765554444444556899999996666655542 367888887543 3333333333
Q ss_pred CcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC--cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce
Q 038577 435 RQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG--HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS 512 (860)
Q Consensus 435 ~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~--h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 512 (860)
.....+++++++..|+.+......|..+|+........... ......++++. .+.++++-...+.|..+|..+++..
T Consensus 246 ~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 246 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCce
Confidence 56789999999998888887766999999875544333332 23445677773 3445555556678888887777655
Q ss_pred eEEcccCCCeEEE
Q 038577 513 VESFPHTHDVLTV 525 (860)
Q Consensus 513 ~~~~~~~~~v~~~ 525 (860)
..+.........+
T Consensus 325 ~~i~~~~~~p~~i 337 (400)
T 3p5b_L 325 NLLAENLLSPEDM 337 (400)
T ss_dssp EEEECSCSCEEEE
T ss_pred EEEecCCCCCceE
Confidence 4444333334443
No 280
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.67 E-value=2.5e-05 Score=74.30 Aligned_cols=210 Identities=14% Similarity=0.128 Sum_probs=137.2
Q ss_pred EeecCCCceEEEEEeeCCCEEE-EEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEEC
Q 038577 386 TFTEHTNAVTALHFMANNHSLL-SASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSM 464 (860)
Q Consensus 386 ~~~~~~~~v~~i~~~~~~~~l~-s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~ 464 (860)
.+.+-...+..++++|++..|+ +...++.|...|.. ++..+.+........-.+++.+++.++++.-.++ .+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~-~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDY-AIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTT-EEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCC-cEEEEEc
Confidence 3445567899999999876555 46678889999987 8888888776656788999999887665544444 8999988
Q ss_pred CCCce---EEEec------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC---CcceeEEc-------ccCCCeEEE
Q 038577 465 KTGRL---LDILS------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE---GKGSVESF-------PHTHDVLTV 525 (860)
Q Consensus 465 ~~~~~---~~~~~------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~-------~~~~~v~~~ 525 (860)
..... +.... ........++|+|.++.|.++.......+|.+.. ........ .+...+.++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 75442 22221 1234568999999998887777766666666641 11111110 134467899
Q ss_pred EEeeCCC-EEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCe
Q 038577 526 VYRPDGR-QLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKY 604 (860)
Q Consensus 526 ~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~ 604 (860)
+++|... +++....+..+.++|.. |+.+..+.-.....+- ...-.....++|.++|+..++ ++-..
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l-----------~~~~~qpEGia~d~~G~lyIv-sE~n~ 245 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGL-----------SHNIKQAEGVAMDASGNIYIV-SEPNR 245 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGC-----------SSCCCSEEEEEECTTCCEEEE-ETTTE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCc-----------ccccCCCCeeEECCCCCEEEE-cCCce
Confidence 9999654 55556667779999975 6666665543221000 000113689999999985554 66666
Q ss_pred EEEEEC
Q 038577 605 ICMYDV 610 (860)
Q Consensus 605 v~vwd~ 610 (860)
++.+.-
T Consensus 246 ~y~f~~ 251 (255)
T 3qqz_A 246 FYRFTP 251 (255)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 666643
No 281
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.65 E-value=1.2e-05 Score=91.90 Aligned_cols=193 Identities=11% Similarity=0.121 Sum_probs=116.8
Q ss_pred CeEEEEEc-CCCCEEEEEeC-CC----cEEEEECCCC-eeEEE-eecCCCceEEEEEeeCCCEEEEEeCC-----CcEEE
Q 038577 351 DVNCLAYS-PDSQLLATGAD-DN----KVKVWTVSSG-FCFVT-FTEHTNAVTALHFMANNHSLLSASLD-----GTVRA 417 (860)
Q Consensus 351 ~v~~~~~s-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~~ 417 (860)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+.. +. .....+.|+||++.|+....| ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99998886543 22 4999999988 63211 11 113467899999888777655 25778
Q ss_pred EEcccccee--eEeeCCCCCcEEEEEECCCCCEEEEEecC--CCeEEEEECCCC--ce--EEEecCcccCeEEEEEcCCC
Q 038577 418 WDLFRYRNF--RTFTTPSSRQFVSLASDQSGEVICAGTLD--SFEIFVWSMKTG--RL--LDILSGHEGPVHGLVFSPTN 489 (860)
Q Consensus 418 wd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~v~d~~~~--~~--~~~~~~h~~~v~~l~~s~~~ 489 (860)
+++.++... ..+..+.......+.++|||++|+..... ...|+++|+.++ +. ........+...++.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 888765432 23333333456788999999999876633 237899999876 33 333333445556666554 5
Q ss_pred CEEE-EEeCC--C--cEEEEEccCCcceeE-EcccCCC--eEEEEEeeCCCEEEEEeCCCe--EEEEeC
Q 038577 490 ATLA-SSSWD--K--TVRLWNVFEGKGSVE-SFPHTHD--VLTVVYRPDGRQLACSTLDGQ--IHFWDP 548 (860)
Q Consensus 490 ~~l~-s~~~d--g--~i~iwd~~~~~~~~~-~~~~~~~--v~~~~~s~~~~~l~~~~~dg~--i~iwd~ 548 (860)
+.|+ ....+ + .|..+|+.+...... +..+... +..+.+. .+.++++...+|. |.++++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5544 44433 2 566667654222233 4444443 3444443 3344556666775 556665
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.64 E-value=5.6e-05 Score=75.79 Aligned_cols=229 Identities=10% Similarity=-0.017 Sum_probs=147.5
Q ss_pred CCeEEEEECCCce-eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceE-EEEecCcccCeEEEEEcCCCC
Q 038577 285 NGVFGLYQMPDFV-CIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESY-ILKQQGHYFDVNCLAYSPDSQ 362 (860)
Q Consensus 285 ~g~i~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~ 362 (860)
...|+.+++.... ....+.........+.|.+.+..|..+....+.|..++...+.. .............+++.+.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4578888887653 11122222345678999998888888877778999999876532 111122223466889987554
Q ss_pred EE-EEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEe--CCCcEEEEEccccceeeEeeCCCCCcEEE
Q 038577 363 LL-ATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSAS--LDGTVRAWDLFRYRNFRTFTTPSSRQFVS 439 (860)
Q Consensus 363 ~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~--~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 439 (860)
.| ++-...+.|.++++..................+++.|.+..|+.+. ..+.|...++.. .....+....-.....
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPNG 170 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSCEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEECCCCCccE
Confidence 44 5545577899999875444333334556789999998765665554 256788887753 3333333333446789
Q ss_pred EEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEE
Q 038577 440 LASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVES 515 (860)
Q Consensus 440 ~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 515 (860)
+++++++..|+.+....+.|..+|+..........+.......+++. .+..+++-...+.|..++..+++....+
T Consensus 171 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 171 LTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 99999888888888777799999987544333333344556778875 3344555555678888888777644333
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.60 E-value=4.3e-06 Score=94.17 Aligned_cols=242 Identities=14% Similarity=0.086 Sum_probs=141.0
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEECCCCee--EEEeec-CCCceEEEEEeeCCCEEEEEeC-CCcEEE
Q 038577 354 CLAYSP-DSQLLATGADDN-----------KVKVWTVSSGFC--FVTFTE-HTNAVTALHFMANNHSLLSASL-DGTVRA 417 (860)
Q Consensus 354 ~~~~s~-~~~~l~~~~~dg-----------~i~iwd~~~~~~--~~~~~~-~~~~v~~i~~~~~~~~l~s~~~-dg~i~~ 417 (860)
..++.+ +++.++.|+.++ .+.+||..+++- +..+.. +.....++++..+++.++.||. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556677 888888887543 588999887653 222221 2333445677789999999984 457999
Q ss_pred EEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEec-CC----CeEEEEECCCCceEEEe----cCcccCeEEEEEcCC
Q 038577 418 WDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTL-DS----FEIFVWSMKTGRLLDIL----SGHEGPVHGLVFSPT 488 (860)
Q Consensus 418 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~----~~i~v~d~~~~~~~~~~----~~h~~~v~~l~~s~~ 488 (860)
||..+.+-...-..+......+++..++|+++++|+. ++ ..+.+||..+.+....- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 9988765333323333333345667789999999883 32 27999999887644320 000000000122345
Q ss_pred CCEEEEEeCCC---------cEEEEEccCCcceeEEccc---------CCCeEEEEEee-CCCEEEEEeCCC--------
Q 038577 489 NATLASSSWDK---------TVRLWNVFEGKGSVESFPH---------THDVLTVVYRP-DGRQLACSTLDG-------- 541 (860)
Q Consensus 489 ~~~l~s~~~dg---------~i~iwd~~~~~~~~~~~~~---------~~~v~~~~~s~-~~~~l~~~~~dg-------- 541 (860)
+..++.++.+| .+..||..+..-....... ...-.++.|.. ++++++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 55555565444 4678888766522211111 11234555543 777888887543
Q ss_pred ---eEEEEeCCCCceeEEE--ecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCC-----------CeE
Q 038577 542 ---QIHFWDPLNGELMYTI--EGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS-----------KYI 605 (860)
Q Consensus 542 ---~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d-----------g~v 605 (860)
.+.+||..+.+-.... ..+. ...-.+++..|+|+.++.|+.+ ..+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~-------------------~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v 490 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYF-------------------ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTP 490 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSS-------------------CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCC-------------------CcccCCeEECCCCCEEEECCcccCcCcCCCCcccce
Confidence 6778888766543322 1111 1123455677899999999864 346
Q ss_pred EEEECCCce
Q 038577 606 CMYDVADQV 614 (860)
Q Consensus 606 ~vwd~~~~~ 614 (860)
.+||..+++
T Consensus 491 ~~ydp~t~~ 499 (656)
T 1k3i_A 491 EIYVPEQDT 499 (656)
T ss_dssp EEEEGGGTE
T ss_pred EEEcCCCCc
Confidence 677766543
No 284
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.60 E-value=1.7e-06 Score=97.44 Aligned_cols=280 Identities=11% Similarity=0.052 Sum_probs=157.0
Q ss_pred EEEecC-CCCEEEEEEcCC-----------eEEEEECCCceeE--EEEeecC-ceeEEEEEeeCCCEEEEEEccCCcEEE
Q 038577 269 ACDYHR-GLDMVVVGFSNG-----------VFGLYQMPDFVCI--HLLSISR-EKITTAVFNELGNWLVFGCAKLGQLLV 333 (860)
Q Consensus 269 ~~~~~~-~~~~l~~~~~~g-----------~i~~~~~~~~~~~--~~~~~~~-~~i~~~~~s~~~~~l~~~~~~~g~i~v 333 (860)
.+++.| +++.++.|+.+. .+.+||..+.+.. ..+.... ....++++..+|+.+++++..+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556667 888888887542 6889998776533 2222222 233457778899999998877678999
Q ss_pred EEccCceEEEEecCccc-CeEEEEEcCCCCEEEEEe-CC-----CcEEEEECCCCeeEEEe----ecCCCceEEEEEeeC
Q 038577 334 WEWRSESYILKQQGHYF-DVNCLAYSPDSQLLATGA-DD-----NKVKVWTVSSGFCFVTF----TEHTNAVTALHFMAN 402 (860)
Q Consensus 334 ~d~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~----~~~~~~v~~i~~~~~ 402 (860)
||..+++.......+.. .-.+++..++|+.++.|+ .+ ..+.+||..++.-...- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 99988765543222211 123456677999999988 34 46899998876533220 000000000111234
Q ss_pred CCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCccc----
Q 038577 403 NHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEG---- 478 (860)
Q Consensus 403 ~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~---- 478 (860)
+..++.++.+|.+.... ... .+..||..+.........+..
T Consensus 350 ~~iyv~Gg~~g~~~~~~----------------------------------~~~-~v~~yd~~~~~w~~~~~~~~~~~~~ 394 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAG----------------------------------PST-AMNWYYTSGSGDVKSAGKRQSNRGV 394 (656)
T ss_dssp CSCCEEECGGGCEEECC----------------------------------SSS-EEEEEECSTTCEEEEEEECEETTEE
T ss_pred CceEEEECCCCcEEEec----------------------------------Ccc-ceeeeecCCcceeecCCcccccccc
Confidence 44555555555432111 011 566666665543332221111
Q ss_pred -----CeEEEEEcC-CCCEEEEEeCCC-----------cEEEEEccCCcceeEE---cccCCCeEEEEEeeCCCEEEEEe
Q 038577 479 -----PVHGLVFSP-TNATLASSSWDK-----------TVRLWNVFEGKGSVES---FPHTHDVLTVVYRPDGRQLACST 538 (860)
Q Consensus 479 -----~v~~l~~s~-~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~~~~ 538 (860)
.-.++.|.. ++++++.|+.++ .+.+||..+..-.... ......-.+++..|++++++.|+
T Consensus 395 ~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 395 APDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp CCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred CCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECC
Confidence 123444433 677777777432 5778887765422221 11222234456678999999997
Q ss_pred CC-----------CeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecC
Q 038577 539 LD-----------GQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGS 601 (860)
Q Consensus 539 ~d-----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~ 601 (860)
.+ ..+.+||..+.+-...-.... ......+..+.|||+.++.|+.
T Consensus 475 ~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~------------------~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 475 QRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSI------------------VRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp BSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSS------------------CCCTTEEEEECTTSCEEEEECC
T ss_pred cccCcCcCCCCcccceEEEcCCCCceeecCCCCC------------------ccccccHhhcCCCcEEEecCCC
Confidence 54 458899987654322100000 0011345567799999999985
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.57 E-value=1.7e-05 Score=83.63 Aligned_cols=237 Identities=14% Similarity=0.096 Sum_probs=144.4
Q ss_pred eeEEEEEee-CCCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeC-CC----cEEEEECCCC
Q 038577 308 KITTAVFNE-LGNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGAD-DN----KVKVWTVSSG 381 (860)
Q Consensus 308 ~i~~~~~s~-~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg----~i~iwd~~~~ 381 (860)
....++++| ++..|.++... +.|+.+|...+....... .......++++++|+.|+++.. ++ .+..++....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 567889997 46666666655 789999988776544433 4456889999999996666554 22 2444443321
Q ss_pred ee-EEEeecCCCceEEEEEee-CCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeE
Q 038577 382 FC-FVTFTEHTNAVTALHFMA-NNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEI 459 (860)
Q Consensus 382 ~~-~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i 459 (860)
.. ...+. .......++++| ++..+++-..++.|..++....................++++|+|++|+++....+.|
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 11 12222 234467788999 6766666667789999998766543333443334568899999999888877766699
Q ss_pred EEEECCC--Cce--EEEecCc---------------ccCeE-EEEEc--------CCCCEEEEEeCCCcEEEEEccCCcc
Q 038577 460 FVWSMKT--GRL--LDILSGH---------------EGPVH-GLVFS--------PTNATLASSSWDKTVRLWNVFEGKG 511 (860)
Q Consensus 460 ~v~d~~~--~~~--~~~~~~h---------------~~~v~-~l~~s--------~~~~~l~s~~~dg~i~iwd~~~~~~ 511 (860)
+.++... ++. ...+.+. -.... .++.. +++.+.++-...+.|+.++. ++.
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~- 372 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR- 372 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE-
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc-
Confidence 9987653 222 1222111 11123 45553 33555555555677888873 443
Q ss_pred eeEEccc------------------CCCeEEEEEeeC-CCEEEEEeCCCeEEEEeCC
Q 038577 512 SVESFPH------------------THDVLTVVYRPD-GRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 512 ~~~~~~~------------------~~~v~~~~~s~~-~~~l~~~~~dg~i~iwd~~ 549 (860)
.....+. -.....++++|+ +.++++-..+..|+.++++
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 2222211 124788999995 5544444556678877653
No 286
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.56 E-value=6.7e-05 Score=71.36 Aligned_cols=201 Identities=9% Similarity=0.104 Sum_probs=138.0
Q ss_pred EeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEec-CcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 038577 302 LSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQ-GHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSS 380 (860)
Q Consensus 302 ~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 380 (860)
+.+-...+..++++|++..|+++...++.|...|.. ++.+..+. .-......+++.+++.++++.-.++.+.++++..
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 344446799999999998888877778999999998 77776663 2235688899999987767666678899998765
Q ss_pred Cee---EEEee------cCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc---cceeeEee------CCCCCcEEEEEE
Q 038577 381 GFC---FVTFT------EHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR---YRNFRTFT------TPSSRQFVSLAS 442 (860)
Q Consensus 381 ~~~---~~~~~------~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~---~~~~~~~~------~~~~~~~~~~~~ 442 (860)
... +.... ..+.....++|+|.++.|+++.......+|.+.. ......+. ......+.++++
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 442 22221 1344568999999998888777666666666641 11122221 112335688999
Q ss_pred CCCCCEEEEEecCCCeEEEEECCCCceEEEecCcc---------cCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 038577 443 DQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHE---------GPVHGLVFSPTNATLASSSWDKTVRLWN 505 (860)
Q Consensus 443 ~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~---------~~v~~l~~s~~~~~l~s~~~dg~i~iwd 505 (860)
+|....+++-+..+..+..+|.+ |+.+..+.-.. .....|+|.++|++.++ ++.+.++.+.
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred cCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 99887777777776699999976 55665543221 25689999999985554 6666565554
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=4.1e-05 Score=80.65 Aligned_cols=251 Identities=9% Similarity=0.096 Sum_probs=141.8
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCC-C----cEEEEEccccc
Q 038577 351 DVNCLAYSP-DSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLD-G----TVRAWDLFRYR 424 (860)
Q Consensus 351 ~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~d-g----~i~~wd~~~~~ 424 (860)
....++++| ++..|.++...+.|+.+|+..+...... ........++++++++.|+.+... + .+..++ ..+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCc
Confidence 467899998 4556666665588999998876654433 355678999999999966666542 2 233333 3332
Q ss_pred ee--eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec-CcccCeEEEEEcCCCCEEEEE-eCCCc
Q 038577 425 NF--RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS-GHEGPVHGLVFSPTNATLASS-SWDKT 500 (860)
Q Consensus 425 ~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~l~~s~~~~~l~s~-~~dg~ 500 (860)
.. ..+. .......++++|++..|+++....+.|+.++..++....... +.......++|+|++++|..+ ...+.
T Consensus 216 ~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 216 FKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp SCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 22 2222 122346788999444455555444499999998766532222 122456789999999955544 45778
Q ss_pred EEEEEccCC--cc--eeEEccc---------------CCCeE-EEEEe--------eCCCEEEEEeCCCeEEEEeCCCCc
Q 038577 501 VRLWNVFEG--KG--SVESFPH---------------THDVL-TVVYR--------PDGRQLACSTLDGQIHFWDPLNGE 552 (860)
Q Consensus 501 i~iwd~~~~--~~--~~~~~~~---------------~~~v~-~~~~s--------~~~~~l~~~~~dg~i~iwd~~~~~ 552 (860)
|..++.... .. ...+.+. -.... .++.. ++|.+.++-...+.|+.++. +|+
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~ 372 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR 372 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc
Confidence 999887542 10 1111110 11123 45553 33555555556678888883 564
Q ss_pred eeEEEeccc--ccCCCccccccccccccCCCCcEEEEEEecC-CCEEEEecCCCeEEEEECC
Q 038577 553 LMYTIEGRR--DISGGRLMTDRRSAANSSSGKCFTTLCYSAD-GSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 553 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~-g~~l~~~~~dg~v~vwd~~ 611 (860)
.. .+.+.. ...+.... .......-.....++++|+ |.++++-.....|+.++++
T Consensus 373 v~-~~~g~g~~~~~G~~dG----~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 373 VT-TFAGRGSNGTSGYNDG----DLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EE-EEEECCTTSSSSCBCE----ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EE-EEEeCCCCCCCcccCC----CchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 33 333221 00000000 0000011124789999995 6555655566788877754
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.54 E-value=8.7e-05 Score=74.42 Aligned_cols=235 Identities=10% Similarity=0.025 Sum_probs=146.8
Q ss_pred EEEEEeCCCcEEEEECCCCe--eEEEeecCCCceEEEEEeeCCCEE-EEEeCCCcEEEEEccccceeeEeeCCCCCcEEE
Q 038577 363 LLATGADDNKVKVWTVSSGF--CFVTFTEHTNAVTALHFMANNHSL-LSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVS 439 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~i~~~~~~~~l-~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~ 439 (860)
+|+.+. ...|+.+++.... ....+. ....+.++.|.+.+..| ++-...+.|..+++........+..........
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 344433 3678899987653 222222 23456789999855444 455567789999987654322222222234567
Q ss_pred EEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC--CCcEEEEEccCCcceeEEcc
Q 038577 440 LASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW--DKTVRLWNVFEGKGSVESFP 517 (860)
Q Consensus 440 ~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~ 517 (860)
+++++.+..|+......+.|.++++........+.........+++.|.+..|+.+.. .+.|...++...........
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC
Confidence 8999877777766665559999998755443334344566789999997666666653 47788888765432222223
Q ss_pred cCCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEE
Q 038577 518 HTHDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYI 596 (860)
Q Consensus 518 ~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l 596 (860)
.-.....++++|++..|+.+. ..+.|..+|+............ ......+++.. +..+
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--------------------~~~P~glav~~-~~ly 222 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS--------------------LPHPFALTLFE-DILY 222 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC--------------------CSCEEEEEEET-TEEE
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC--------------------CCCceEEEEeC-CEEE
Confidence 344578999999777777664 4678999998643322222111 11356777753 3455
Q ss_pred EEecCCCeEEEEECCCceEEEEEe
Q 038577 597 LAGGSSKYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 597 ~~~~~dg~v~vwd~~~~~~~~~~~ 620 (860)
.+-...+.|..++..+|+..+.+.
T Consensus 223 wtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 223 WTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEecCCCeEEEEECCCCCceEEEe
Confidence 555567899999998887766554
No 289
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.53 E-value=0.00038 Score=72.51 Aligned_cols=237 Identities=11% Similarity=-0.031 Sum_probs=153.6
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEE-eCCCcEEEEEccccc---eeeEeeCCCCCcEE
Q 038577 363 LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSA-SLDGTVRAWDLFRYR---NFRTFTTPSSRQFV 438 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~~wd~~~~~---~~~~~~~~~~~~~~ 438 (860)
+|+.+.. ..|+..++......... .....+.+++|++.+..|+.+ ...+.|..+++.... ....+.........
T Consensus 85 ~ll~~~~-~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTNR-HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEET-TEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEecc-ceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 4544443 68898898766554444 345678899999866555544 456788888886522 22333333444678
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC--CCcEEEEEccCCcceeEEc
Q 038577 439 SLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW--DKTVRLWNVFEGKGSVESF 516 (860)
Q Consensus 439 ~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~ 516 (860)
.+++++.+..|+.+....+.|.+.++........+.........|++.|.+.+|+.+.. .+.|...++..........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~ 242 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT 242 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE
Confidence 89999977777777666569999999866555555444556889999997776665553 3678888887654333333
Q ss_pred ccCCCeEEEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCE
Q 038577 517 PHTHDVLTVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSY 595 (860)
Q Consensus 517 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~ 595 (860)
..-.....+++++++..|+.+. ..+.|..+|++............. -.....+++. .+..
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~------------------l~~P~gl~v~-~~~l 303 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR------------------LAHPFSLAVF-EDKV 303 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSST------------------TSSEEEEEEE-TTEE
T ss_pred CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCC------------------CCCCEEEEEe-CCEE
Confidence 3446789999999888887775 456899999865433332222111 0124567763 3445
Q ss_pred EEEecCCCeEEEEECCCceEEEEEe
Q 038577 596 ILAGGSSKYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 596 l~~~~~dg~v~vwd~~~~~~~~~~~ 620 (860)
+++-...+.|..+|..+|+.+..+.
T Consensus 304 ywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 304 FWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEecCCCCeEEEEEcCCCCceEEEe
Confidence 5555667889999988887776654
No 290
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.49 E-value=4.6e-05 Score=80.22 Aligned_cols=236 Identities=11% Similarity=0.083 Sum_probs=145.7
Q ss_pred eeEEEEEeeC--CCEEEEEEccCCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCC
Q 038577 308 KITTAVFNEL--GNWLVFGCAKLGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDN-----KVKVWTVSS 380 (860)
Q Consensus 308 ~i~~~~~s~~--~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~ 380 (860)
....++++|+ +..|.++... +.|+.++..++...... ........++++++|+ |+++...+ .+..++...
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 4568899984 5566666555 88999999877765543 3445688999999999 44444321 233333322
Q ss_pred Cee-EEEeecCCCceEEEEEee-CCCEEEEEeCCCcEEEEEccccceee-EeeCCCCCcEEEEEECCCCCEEEEEecCCC
Q 038577 381 GFC-FVTFTEHTNAVTALHFMA-NNHSLLSASLDGTVRAWDLFRYRNFR-TFTTPSSRQFVSLASDQSGEVICAGTLDSF 457 (860)
Q Consensus 381 ~~~-~~~~~~~~~~v~~i~~~~-~~~~l~s~~~dg~i~~wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 457 (860)
+.. ...+. .-.....++++| ++..+++-..++.|+.++..++.... .+..........++++|+|+.|+++....+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 211 11121 234566788999 66666666667889999987666522 223222223357999999998888877766
Q ss_pred eEEEEECC--CCce--EEEecCc---------------ccCeEEEEE---------cCCCCEEEEEeCCCcEEEEEccCC
Q 038577 458 EIFVWSMK--TGRL--LDILSGH---------------EGPVHGLVF---------SPTNATLASSSWDKTVRLWNVFEG 509 (860)
Q Consensus 458 ~i~v~d~~--~~~~--~~~~~~h---------------~~~v~~l~~---------s~~~~~l~s~~~dg~i~iwd~~~~ 509 (860)
.|+.++.. ++.. ...+.+. -.....+++ .+++.+.++-...+.|+.++. ++
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 99998865 3322 1122111 123677999 667776666666788998884 44
Q ss_pred cceeEEccc------------------CCCeEEEEEe-eCCCEEEEEeCCCeEEEEeCC
Q 038577 510 KGSVESFPH------------------THDVLTVVYR-PDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 510 ~~~~~~~~~------------------~~~v~~~~~s-~~~~~l~~~~~dg~i~iwd~~ 549 (860)
. +..+.+. -.....++++ ++|.++++-..++.|+.++++
T Consensus 375 ~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 R-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp E-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 3 3222211 1236789999 566555555556778877653
No 291
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.49 E-value=0.0015 Score=65.52 Aligned_cols=284 Identities=14% Similarity=0.106 Sum_probs=187.9
Q ss_pred CcEEEeCCCEEEeee----CCeEEEEECCCCcEE-eeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEe
Q 038577 16 GNAVLSQNTKLISPV----GNRVSVTDLIKSKTV-TLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRV 90 (860)
Q Consensus 16 ~~~~~sdg~~l~~~~----~~~i~v~d~~~~~~~-~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~ 90 (860)
+++.+...++++.-. ++.|.|.|+.++... ..+..- -+.-.+|..+.||.-. ..++.|+|+++.+.+..+
T Consensus 28 ~~~TmESDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~ 102 (494)
T 1bpo_A 28 STLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAH 102 (494)
T ss_dssp TTEEEEETTEEEEEECCTTCCEEEEEETTSTTSCEEEECCC----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred ceeeeecCceEEEEecCCCCCeEEEEECCCCCcceeccccc----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcce
Confidence 355666556777643 357999999987653 222222 2455788888887654 689999999999999999
Q ss_pred ecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeecc----CCCeEEEEEcCCCCeEEEee------
Q 038577 91 RFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADC----NDKVTALNWSPDSNYLLVGS------ 160 (860)
Q Consensus 91 ~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~s~d~~~l~s~~------ 160 (860)
....+|..=.|-. .+.|+...+..|+-|++.+... +...+..| ...|..-..++|.++++..|
T Consensus 103 ~~~e~VvfWkWis-~~~l~lVT~taVyHWsi~~~s~------P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~ 175 (494)
T 1bpo_A 103 TMTDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQ------PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN 175 (494)
T ss_dssp ECSSCCCEEEEEE-TTEEEEECSSEEEEEESSSSCC------CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETT
T ss_pred ecCCCceEEEecC-CCeEEEEcCCeeEEecccCCCC------chhheecchhcccceEEEEEECCCCCeEEEEeecccCC
Confidence 8888888777763 4577888899999999986433 23444433 34577788899999887643
Q ss_pred -cCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCC---ccEEEeeecCCCCCCccccCC
Q 038577 161 -KDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARD---CYMFSWGFSGNDGKIDETMED 236 (860)
Q Consensus 161 -~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~d---g~i~~w~~~~~~~~~~~~~~~ 236 (860)
-.|.+.+|..+.. ....+.||.+....+.+. |.......+..+.+. +.+.+-++.....
T Consensus 176 ~v~G~mQLYS~er~-------~sQ~ieGhaa~F~~~~~~--g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~-------- 238 (494)
T 1bpo_A 176 RVVGAMQLYSVDRK-------VSQPIEGHAASFAQFKME--GNAEESTLFCFAVRGQAGGKLHIIEVGTPPT-------- 238 (494)
T ss_dssp EEEEEEEEEESTTC-------CEEEECCSEEEEEEEECT--TCSSEEEEEEEEECSTTCCEEEEEECSCCCT--------
T ss_pred cccceEEEeecccc-------ccchheeeeeeeEEEecC--CCCCCceEEEEEEecCCCcEEEEEEcCCCcc--------
Confidence 2477889988876 567788888776554443 322222234444332 6788887754210
Q ss_pred CCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEee
Q 038577 237 SEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNE 316 (860)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 316 (860)
..... ..+.-++ ........+-..++..++.-..++.-+.-|.+.+||+.++.++..-+...+.|...+...
T Consensus 239 ----~~~~f--~kk~vdv--~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~ 310 (494)
T 1bpo_A 239 ----GNQPF--PKKAVDV--FFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE 310 (494)
T ss_dssp ----TCCCC--CCEEEEC--CCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET
T ss_pred ----CCCCc--cceeeee--eCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccC
Confidence 00000 0001100 011112345678899999999999999999999999999999999888888887777666
Q ss_pred CCCEEEEEEccCCcEEEEEcc
Q 038577 317 LGNWLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 317 ~~~~l~~~~~~~g~i~v~d~~ 337 (860)
...-++..... |.|.--.+.
T Consensus 311 ~~~Gi~~Vnr~-GqVl~v~v~ 330 (494)
T 1bpo_A 311 ATAGIIGVNRK-GQVLSVCVE 330 (494)
T ss_dssp TTTEEEEEETT-CEEEEEEEC
T ss_pred CCCcEEEEccC-ceEEEEEEc
Confidence 66666555543 655544443
No 292
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=2.7e-05 Score=88.96 Aligned_cols=242 Identities=10% Similarity=-0.000 Sum_probs=136.4
Q ss_pred eeEEEEEe-eCCCEEEEEEccCC----cEEEEEccCc-eEEEEecCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEE
Q 038577 308 KITTAVFN-ELGNWLVFGCAKLG----QLLVWEWRSE-SYILKQQGHYFDVNCLAYSPDSQLLATGADD-----NKVKVW 376 (860)
Q Consensus 308 ~i~~~~~s-~~~~~l~~~~~~~g----~i~v~d~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw 376 (860)
.+...+|| |||++++++...+| .|+++|+.++ +.+.. .-......++|+|||+.|+....+ ..|+.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57789999 99999998877644 4999999988 63211 001113468899999988877664 258888
Q ss_pred ECCCCee--EEEee-cCCCceEEEEEeeCCCEEEEEeC---CCcEEEEEccccc-ee--eEeeCCCCCcEEEEEECCCCC
Q 038577 377 TVSSGFC--FVTFT-EHTNAVTALHFMANNHSLLSASL---DGTVRAWDLFRYR-NF--RTFTTPSSRQFVSLASDQSGE 447 (860)
Q Consensus 377 d~~~~~~--~~~~~-~~~~~v~~i~~~~~~~~l~s~~~---dg~i~~wd~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~ 447 (860)
++.++.. ...+. ........+.|+|||++|+..+. ...|.++|+.++. .. +.+.........++.++. |.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~ 331 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TS 331 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TT
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CC
Confidence 8877642 22222 22334678899999998886653 3358888887652 22 333322222334444333 55
Q ss_pred EEE-EEecC---CCeEEEEECCCC-ceEEEecCccc--CeEEEEEcCCCCEEEEEeCCCcE--EEEEc-------cCCcc
Q 038577 448 VIC-AGTLD---SFEIFVWSMKTG-RLLDILSGHEG--PVHGLVFSPTNATLASSSWDKTV--RLWNV-------FEGKG 511 (860)
Q Consensus 448 ~l~-~~~~~---~~~i~v~d~~~~-~~~~~~~~h~~--~v~~l~~s~~~~~l~s~~~dg~i--~iwd~-------~~~~~ 511 (860)
.++ .+..+ ...|+.+|+.++ +....+..|.. .+..+.+. .+.++++...++.. .++++ .+++.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~ 410 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTG 410 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCcc
Confidence 444 44333 237888888753 32220222333 34555554 23445566667754 45554 23320
Q ss_pred eeEE-cccCCCeEEEEE----eeCCC-EEEEEeCC---CeEEEEeCCCCce
Q 038577 512 SVES-FPHTHDVLTVVY----RPDGR-QLACSTLD---GQIHFWDPLNGEL 553 (860)
Q Consensus 512 ~~~~-~~~~~~v~~~~~----s~~~~-~l~~~~~d---g~i~iwd~~~~~~ 553 (860)
...+ ......+..+.+ ++++. ++++.+.. +.++.+|+.+++.
T Consensus 411 ~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 411 LREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCE
T ss_pred ceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcE
Confidence 2222 112222333332 34555 44444333 4588888887763
No 293
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.42 E-value=0.0064 Score=69.77 Aligned_cols=464 Identities=8% Similarity=0.011 Sum_probs=258.0
Q ss_pred CCCEEEeeeCCeEEEEECCCCcEEeecc----CCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeec-----
Q 038577 22 QNTKLISPVGNRVSVTDLIKSKTVTLPV----ESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRF----- 92 (860)
Q Consensus 22 dg~~l~~~~~~~i~v~d~~~~~~~~~~~----~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~----- 92 (860)
+| .|-.+..+.|..||..+++...... -....|.++...++|.+.+. +. +-+..++..+++.......
T Consensus 112 ~g-~lWigt~~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~ 188 (758)
T 3ott_A 112 GD-TLWLGALNGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVG-TY-NGLCRYIPSNGKFEGIPLPVHSSQ 188 (758)
T ss_dssp TT-EEEEEETTEEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEE-ET-TEEEEEETTTTEEEEECCCCCTTC
T ss_pred CC-cEEEEcCCcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEE-eC-CCHhhCccCCCceEEecCCCcccc
Confidence 55 4555555689999998877654411 12346889988888886664 33 3577888877664322111
Q ss_pred -CCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeec
Q 038577 93 -KYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVK 171 (860)
Q Consensus 93 -~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~ 171 (860)
...|.++...+++..|.++.++-+..++..+++.. ....+ ....|.++...++|.+.+ |+.+ -+.+++..
T Consensus 189 ~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~-----~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~ 259 (758)
T 3ott_A 189 SNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIK-----QTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHND 259 (758)
T ss_dssp SSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEE-----EEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCT
T ss_pred ccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEE-----eccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecC
Confidence 12378888887776555554456888888765421 11112 134588888888776544 4444 57778766
Q ss_pred ccccCcccccceEee--------cCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCC
Q 038577 172 EKLKGIHTNKPFLLL--------GHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPG 243 (860)
Q Consensus 172 ~~~~~~~~~~~~~~~--------~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~ 243 (860)
+. . ...+. -....|.++....++. |-.++..| +.+..... ..
T Consensus 260 ~~-~------~~~~~~~~~~~~~l~~~~i~~i~~D~~g~------lWiGT~~G-l~~~~~~~-~~--------------- 309 (758)
T 3ott_A 260 TT-P------LQHIIHDSRNIQSLTNNIIWNIFADQEHN------IWLGTDYG-ISLSRYNS-AL--------------- 309 (758)
T ss_dssp TS-C------CEEECCCTTCTTSCSCSCEEEEEECTTCC------EEEEESSS-EEEECCCC--C---------------
T ss_pred CC-c------EEEEEcCCCCcCcCCcCeEEEEEEcCCCC------EEEEeCCc-ccccccCC-ce---------------
Confidence 54 1 11111 1234588887777664 66666666 44332211 00
Q ss_pred CCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCce--eEEEEe-------ecCceeEEEEE
Q 038577 244 TPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFV--CIHLLS-------ISREKITTAVF 314 (860)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~--~~~~~~-------~~~~~i~~~~~ 314 (860)
..+... ...-......|.++....+|.+. +|+.+| +..++..++. ....+. .....|.++.-
T Consensus 310 ------~~~~~~-~~~~~~~~~~v~~i~~D~~g~lW-iGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 380 (758)
T 3ott_A 310 ------QFIPIS-QITGTGDGNQFYSLFRDSKGFYW-FGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYE 380 (758)
T ss_dssp ------EEEEHH-HHSCSCCCCBEEEEEECTTCCEE-EEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEE
T ss_pred ------eEEecc-cCCCCCCCceEEEEEEcCCCCEE-EeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEE
Confidence 011000 00001123468888888877654 455555 5566654421 111121 11235777777
Q ss_pred eeCCCEEEEEEccCCcEEEEEccCceEEEEec-C-----cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-----Cee
Q 038577 315 NELGNWLVFGCAKLGQLLVWEWRSESYILKQQ-G-----HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSS-----GFC 383 (860)
Q Consensus 315 s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~-~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~-----~~~ 383 (860)
.++|+.-+ ++ . +-+..|+..+++...... . ....|.++...++|. |-.|+..+-+.++|..+ ...
T Consensus 381 d~~g~lWi-gt-~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~ 456 (758)
T 3ott_A 381 DKEQQLWI-AT-D-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQ 456 (758)
T ss_dssp CTTSCEEE-EE-T-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSE
T ss_pred CCCCCEEE-Ee-C-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEEEccccccccCCcc
Confidence 77776544 43 3 678999988876543221 1 224578888777775 55577666788888542 111
Q ss_pred E---EEeec----CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCC--CCCcEEEEEECCCCCEEEEEec
Q 038577 384 F---VTFTE----HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTP--SSRQFVSLASDQSGEVICAGTL 454 (860)
Q Consensus 384 ~---~~~~~----~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~ 454 (860)
. ..+.. ....|.++...++|+..+.++..+-+..+|..+.+........ ....+.++..+.+|.+.+.. .
T Consensus 457 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~ 535 (758)
T 3ott_A 457 YIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H 535 (758)
T ss_dssp EECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T
T ss_pred eecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c
Confidence 1 11111 1235888988888876654455566888998765543321111 12357788888888877554 4
Q ss_pred CCCeEEEEECCCCceEEE-ecC-cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEe-eCC
Q 038577 455 DSFEIFVWSMKTGRLLDI-LSG-HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYR-PDG 531 (860)
Q Consensus 455 ~~~~i~v~d~~~~~~~~~-~~~-h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s-~~~ 531 (860)
+ -+..||..+++.... ..+ ....|.++... +| .|..++..| +..+|..+.+.. ........+....+. ++|
T Consensus 536 ~--Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g-~lWi~t~~G-l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G 609 (758)
T 3ott_A 536 G--GVMRINPKDESQQSISFGSFSNNEILSMTCV-KN-SIWVSTTNG-LWIIDRKTMDAR-QQNMTNKRFTSLLFDPKED 609 (758)
T ss_dssp T--EEEEECC--CCCCBCCCCC---CCEEEEEEE-TT-EEEEEESSC-EEEEETTTCCEE-EC--CCCCCSEEEEETTTT
T ss_pred C--ceEEEecCCCceEEecccCCCccceEEEEEC-CC-CEEEECCCC-eEEEcCCCceeE-EecCCCCceeeeEEECCCC
Confidence 3 488898776543221 111 13457777764 55 455555566 778888766522 111122223344444 355
Q ss_pred CEEEEEeCCCeEEEEeCC
Q 038577 532 RQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 532 ~~l~~~~~dg~i~iwd~~ 549 (860)
.|..|+.+| +..++..
T Consensus 610 -~l~fG~~~G-l~~f~p~ 625 (758)
T 3ott_A 610 -CVYLGGADG-FGISHSN 625 (758)
T ss_dssp -EEEEECBSE-EEEEEC-
T ss_pred -cEEEecCCc-eEEEChh
Confidence 566777777 5566664
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.40 E-value=0.00028 Score=74.26 Aligned_cols=253 Identities=11% Similarity=0.077 Sum_probs=146.0
Q ss_pred cCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCC-----cEEEEEccc
Q 038577 350 FDVNCLAYSPD--SQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDG-----TVRAWDLFR 422 (860)
Q Consensus 350 ~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg-----~i~~wd~~~ 422 (860)
.....++++|+ +..|..+...+.|+.++..++...... .....+..++++++++ |+.+...+ .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 34678999984 445666555589999998877665443 3556689999999999 54444321 133333222
Q ss_pred cce-eeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEe-c-CcccCeEEEEEcCCCCEEEEEe-CC
Q 038577 423 YRN-FRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDIL-S-GHEGPVHGLVFSPTNATLASSS-WD 498 (860)
Q Consensus 423 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~-~-~h~~~v~~l~~s~~~~~l~s~~-~d 498 (860)
... ...+. .......++++|++..|+++....+.|+.+|..++.....+ . +....-..++|+|++++|..+. ..
T Consensus 217 ~~~~~~~~~--~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 217 GFTERLSLC--NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TTCCEEEEE--ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred Ceecccccc--ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 111 01111 12234668899944445555544449999999878763322 2 1122334799999999655554 56
Q ss_pred CcEEEEEccC--Ccc--eeEEcc---------------cCCCeEEEEE---------eeCCCEEEEEeCCCeEEEEeCCC
Q 038577 499 KTVRLWNVFE--GKG--SVESFP---------------HTHDVLTVVY---------RPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 499 g~i~iwd~~~--~~~--~~~~~~---------------~~~~v~~~~~---------s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
+.|+.++... +.. ...+.+ .-.....+++ .++|.+.++-...+.|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 7899988653 211 011111 1123677899 667766666666788999985 5
Q ss_pred CceeEEEeccccc-CCCccccccccccccCCCCcEEEEEEe-cCCCEEEEecCCCeEEEEECC
Q 038577 551 GELMYTIEGRRDI-SGGRLMTDRRSAANSSSGKCFTTLCYS-ADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 551 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~l~~s-~~g~~l~~~~~dg~v~vwd~~ 611 (860)
|. +.++.+.... ..+. .+. .......-.....++++ ++|.++++-...+.|+.++++
T Consensus 374 G~-v~t~~G~g~~~~~G~--~dG-~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 GR-VTTYAGRGNSREWGY--VDG-ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SE-EEEEECCCTTCSSCC--BCE-ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-EEEEEeCCCCCcccc--CCC-ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 64 3344332110 0000 000 00001112347899999 677766666667888887764
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=0.00022 Score=74.75 Aligned_cols=259 Identities=11% Similarity=0.038 Sum_probs=150.9
Q ss_pred CeEEEEEcCC-CCEEEEE-eCCCcEEEEECCCCeeEEEeecC---CCceEEEEE-------eeCCCEEEEEeCCC-c---
Q 038577 351 DVNCLAYSPD-SQLLATG-ADDNKVKVWTVSSGFCFVTFTEH---TNAVTALHF-------MANNHSLLSASLDG-T--- 414 (860)
Q Consensus 351 ~v~~~~~s~~-~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~---~~~v~~i~~-------~~~~~~l~s~~~dg-~--- 414 (860)
....|+|+|. +..|+++ ...+.|++.|+.++......... ...+..++| +++++.|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 4444444 44467999998877766554332 235899999 99998777776554 2
Q ss_pred ---EEEEEccc-ccee-----eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECC-------CCce---------
Q 038577 415 ---VRAWDLFR-YRNF-----RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMK-------TGRL--------- 469 (860)
Q Consensus 415 ---i~~wd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~-------~~~~--------- 469 (860)
+.+++... +... +.+. .......++++|++..|+++....+.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 55555333 1111 1222 112345778899777777666666599999997 5553
Q ss_pred --EEE-ec-CcccCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCcc-e---eEEccc---------------CCCeE-E
Q 038577 470 --LDI-LS-GHEGPVHGLVFSPTNATLASS-SWDKTVRLWNVFEGKG-S---VESFPH---------------THDVL-T 524 (860)
Q Consensus 470 --~~~-~~-~h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~~-~---~~~~~~---------------~~~v~-~ 524 (860)
... +. +.......++|+|+|++|..+ +..+.|+.++...... + ..+.+. -.... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 11 223456899999999965554 4567888876543221 1 111111 11234 4
Q ss_pred EEEe-------eCCCEEEEEeCCCeEEEEeCCCCceeEEEeccccc-------CCCccccccccccccCCCCcEEEEEEe
Q 038577 525 VVYR-------PDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDI-------SGGRLMTDRRSAANSSSGKCFTTLCYS 590 (860)
Q Consensus 525 ~~~s-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~l~~s 590 (860)
++.. ++|.++++-..+..|+.++ .+| .+.++-+.... ..+.. +- .......-.....|+++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~--dG-~~~~~a~f~~P~gIavd 452 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTD--DG-DLREVARFRDVSGLVYD 452 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCC--CE-ETTTTCCCSSEEEEEEE
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccC--CC-CchhhhhcCCCcEEEEE
Confidence 4554 4566666656778899999 466 45555543210 00000 00 00111122347899999
Q ss_pred cC-CCEEEEecCCCeEEEEECCCceEE
Q 038577 591 AD-GSYILAGGSSKYICMYDVADQVLL 616 (860)
Q Consensus 591 ~~-g~~l~~~~~dg~v~vwd~~~~~~~ 616 (860)
++ |.+.++=.....|+.++++....+
T Consensus 453 ~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 453 DVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp TTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 97 776666667788999888776544
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.37 E-value=0.00089 Score=67.65 Aligned_cols=275 Identities=9% Similarity=0.045 Sum_probs=152.1
Q ss_pred CCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEE-eeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeec
Q 038577 93 KYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRT-LADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVK 171 (860)
Q Consensus 93 ~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~ 171 (860)
...+.+|.|.+++..+|++..+.| +...+.++ . +..+.. .......+.++.|.+ +. +..++.++.|.. ..+
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~-t---W~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~D 106 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQ-T---WEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTD 106 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTS-S---CEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESS
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCC-C---CeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECC
Confidence 457899999988888888877765 33344443 1 211111 111244688899986 44 444456664433 222
Q ss_pred ccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeee
Q 038577 172 EKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKK 251 (860)
Q Consensus 172 ~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (860)
.+..- ........+.+.+..+.+.+++. .++ ++.++.+. ....+. ..
T Consensus 107 gG~tW---~~~~~~~~~~~~~~~i~~~~~~~-----~~~-~~~~g~v~--~S~DgG----------------------~t 153 (327)
T 2xbg_A 107 GGQSW---SQIPLDPKLPGSPRLIKALGNGS-----AEM-ITNVGAIY--RTKDSG----------------------KN 153 (327)
T ss_dssp TTSSC---EECCCCTTCSSCEEEEEEEETTE-----EEE-EETTCCEE--EESSTT----------------------SS
T ss_pred CCCCc---eECccccCCCCCeEEEEEECCCC-----EEE-EeCCccEE--EEcCCC----------------------CC
Confidence 23111 11111112334567788777664 444 44555442 222211 25
Q ss_pred EEeeeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEEC--CCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCC
Q 038577 252 WGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQM--PDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLG 329 (860)
Q Consensus 252 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g 329 (860)
|..... .....+..+.+.|++.+++++...+..+-.|- .+.+.+. ......+..+.+.+++..++++ . +|
T Consensus 154 W~~~~~----~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~-~-~G 225 (327)
T 2xbg_A 154 WQALVQ----EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV-N-GG 225 (327)
T ss_dssp EEEEEC----SCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEE-T-TT
T ss_pred CEEeec----CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEe-C-Cc
Confidence 655432 23446889999999887766654433333332 2223221 2334578888899988766544 3 37
Q ss_pred cEEEEEccCceEEEEec-C---cccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeec---CCCceEEEEEeeC
Q 038577 330 QLLVWEWRSESYILKQQ-G---HYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTE---HTNAVTALHFMAN 402 (860)
Q Consensus 330 ~i~v~d~~~~~~~~~~~-~---~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~i~~~~~ 402 (860)
.+++.+...+..-.... . +...+.++++.+++..++++. +|.+ .+..+.++.-..+.. ....+.++.|.++
T Consensus 226 ~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEET
T ss_pred eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECC
Confidence 77766433233222221 1 223588999998887776655 5666 445555555444432 2456788888765
Q ss_pred CCEEEEEeCCCcEEEEE
Q 038577 403 NHSLLSASLDGTVRAWD 419 (860)
Q Consensus 403 ~~~l~s~~~dg~i~~wd 419 (860)
+ .+++++.+|.|.-++
T Consensus 304 ~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 304 D-QGFILGQKGILLRYV 319 (327)
T ss_dssp T-EEEEECSTTEEEEEC
T ss_pred C-ceEEEcCCceEEEEc
Confidence 5 577778889776655
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.33 E-value=0.0028 Score=64.00 Aligned_cols=273 Identities=10% Similarity=0.050 Sum_probs=152.3
Q ss_pred CCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceE
Q 038577 189 RDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVT 268 (860)
Q Consensus 189 ~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 268 (860)
...+.++.|.+++. .++ ++.+|.|. ...+.+ +.|...... .......+.
T Consensus 35 ~~~~~~v~~~~~~~-----~~~-~G~~g~i~-~s~DgG-----------------------~tW~~~~~~-~~~~~~~~~ 83 (327)
T 2xbg_A 35 TATILDMSFIDRHH-----GWL-VGVNATLM-ETRDGG-----------------------QTWEPRTLV-LDHSDYRFN 83 (327)
T ss_dssp SSCEEEEEESSSSC-----EEE-EETTTEEE-EESSTT-----------------------SSCEECCCC-CSCCCCEEE
T ss_pred CCcEEEEEECCCCc-----EEE-EcCCCeEE-EeCCCC-----------------------CCCeECCCC-CCCCCccEE
Confidence 34688888876665 555 55667553 222222 145443211 111234688
Q ss_pred EEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEee---cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc-eEEEE
Q 038577 269 ACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSI---SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE-SYILK 344 (860)
Q Consensus 269 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~-~~~~~ 344 (860)
.+.+.+ +. +++++..|.|.. ..+.++.-..... ....+..+.+.+++..++++ .. |.+..- ...+ .....
T Consensus 84 ~i~~~~-~~-~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~-g~v~~S-~DgG~tW~~~ 157 (327)
T 2xbg_A 84 SVSFQG-NE-GWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NV-GAIYRT-KDSGKNWQAL 157 (327)
T ss_dssp EEEEET-TE-EEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TT-CCEEEE-SSTTSSEEEE
T ss_pred EEEecC-Ce-EEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CC-ccEEEE-cCCCCCCEEe
Confidence 888876 44 444456665443 3333333232221 12356777777777655544 33 544322 1222 22222
Q ss_pred ecCcccCeEEEEEcCCCCEEEEEeCCCcEEE-EEC--CCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcc
Q 038577 345 QQGHYFDVNCLAYSPDSQLLATGADDNKVKV-WTV--SSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLF 421 (860)
Q Consensus 345 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i-wd~--~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~ 421 (860)
.......+..+++.+++.+++++.. |.+.. .|- .+.+.+. ......+..+.+.+++..+ .++.+|.+...+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~g~~-G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D 233 (327)
T 2xbg_A 158 VQEAIGVMRNLNRSPSGEYVAVSSR-GSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPD 233 (327)
T ss_dssp ECSCCCCEEEEEECTTSCEEEEETT-SSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEE-EEETTTEEEEEETT
T ss_pred ecCCCcceEEEEEcCCCcEEEEECC-CcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEE-EEeCCceEEEecCC
Confidence 2345567889999999888777654 44443 342 2223321 2345678899998888654 55667887776433
Q ss_pred ccceeeEeeCC---CCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC---cccCeEEEEEcCCCCEEEEE
Q 038577 422 RYRNFRTFTTP---SSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG---HEGPVHGLVFSPTNATLASS 495 (860)
Q Consensus 422 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~---h~~~v~~l~~s~~~~~l~s~ 495 (860)
.++....+..+ ....+..+.+.+++..++++. ++ .+ .+....|+.-..+.. +...+.++.|.+++. ++.+
T Consensus 234 ~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g-~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 309 (327)
T 2xbg_A 234 NSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AG-AL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFIL 309 (327)
T ss_dssp EEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TT-CE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEE
T ss_pred CCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CC-eE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEE
Confidence 34444433333 223578888998888777765 33 45 344555554444432 345678898875554 6666
Q ss_pred eCCCcEEEEEc
Q 038577 496 SWDKTVRLWNV 506 (860)
Q Consensus 496 ~~dg~i~iwd~ 506 (860)
+.+|.|.-++-
T Consensus 310 G~~G~i~~~~~ 320 (327)
T 2xbg_A 310 GQKGILLRYVT 320 (327)
T ss_dssp CSTTEEEEECC
T ss_pred cCCceEEEEcC
Confidence 77897776653
No 298
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.31 E-value=0.00087 Score=75.66 Aligned_cols=228 Identities=10% Similarity=-0.056 Sum_probs=145.7
Q ss_pred cCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc----eEEEEecCcccCeEEEEEcC
Q 038577 284 SNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE----SYILKQQGHYFDVNCLAYSP 359 (860)
Q Consensus 284 ~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~----~~~~~~~~~~~~v~~~~~s~ 359 (860)
....|+..++........ ......+..++|.+.+..|+.+....+.|+.+++... .....+.........|++.+
T Consensus 402 n~~~Ir~i~l~~~~~~~l-~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEE-ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceee-ecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 345677778765544333 3345577899999988888888777788998888753 22233333445567899998
Q ss_pred CCCEEE-EEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeC-C-CcEEEEEccccceeeEeeCCCCCc
Q 038577 360 DSQLLA-TGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASL-D-GTVRAWDLFRYRNFRTFTTPSSRQ 436 (860)
Q Consensus 360 ~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d-g~i~~wd~~~~~~~~~~~~~~~~~ 436 (860)
.+..|+ +-...+.|.+.++........+...-....+|++.|.+..|+.+.. . +.|...++.. .....+.......
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQW 559 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSC
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-CceEEEEeCCCCC
Confidence 775555 4455788999998755444444444556899999997656655543 2 6788888754 3334444444456
Q ss_pred EEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecC--cccCeEEEEEcCCCCEEEEE-eCCCcEEEEEccCCccee
Q 038577 437 FVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSG--HEGPVHGLVFSPTNATLASS-SWDKTVRLWNVFEGKGSV 513 (860)
Q Consensus 437 ~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~--h~~~v~~l~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~ 513 (860)
...+++++.+..|+.+......|..+++........+.. .-....+|++. +..|+.+ ...+.|...|..+++...
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVN 637 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCE
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceE
Confidence 789999998888888877766999999975544444432 22334566663 3344444 445677777766665443
Q ss_pred EE
Q 038577 514 ES 515 (860)
Q Consensus 514 ~~ 515 (860)
.+
T Consensus 638 ~l 639 (791)
T 3m0c_C 638 LL 639 (791)
T ss_dssp EE
T ss_pred Ee
Confidence 33
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.30 E-value=0.00026 Score=69.83 Aligned_cols=200 Identities=17% Similarity=0.287 Sum_probs=130.9
Q ss_pred CCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECC----CCC---EEEEEecC--CCeEEEEEC--CCCceE
Q 038577 402 NNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQ----SGE---VICAGTLD--SFEIFVWSM--KTGRLL 470 (860)
Q Consensus 402 ~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~l~~~~~~--~~~i~v~d~--~~~~~~ 470 (860)
....++.....+-+.+||+ +++.++.+... .+..+.+-| .|+ ++++...+ ..+|.+|++ .+++ +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g---~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l 113 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTG---KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-L 113 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCS---CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-E
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCC---CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-e
Confidence 3456666677789999999 88888887542 344444433 222 34445554 459999976 3443 4
Q ss_pred EEecC------cc-cCeEEEEE--cCC-CC-EEEEEeCCCcEEEEEccC---Cc---ceeEEcccCCCeEEEEEeeCCCE
Q 038577 471 DILSG------HE-GPVHGLVF--SPT-NA-TLASSSWDKTVRLWNVFE---GK---GSVESFPHTHDVLTVVYRPDGRQ 533 (860)
Q Consensus 471 ~~~~~------h~-~~v~~l~~--s~~-~~-~l~s~~~dg~i~iwd~~~---~~---~~~~~~~~~~~v~~~~~s~~~~~ 533 (860)
..+.. .. ..+..+++ +|. ++ +++....+|.+..|++.. +. .....+...+.+-.++..+....
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGR 193 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTE
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCe
Confidence 44421 11 55667787 774 44 577788899999999843 21 12233445678899999999999
Q ss_pred EEEEeCCCeEEEEeCC-----CCceeEEEecccccCCCccccccccccccCCCCcEEEEEE--ecCCC-EEEEec-CCCe
Q 038577 534 LACSTLDGQIHFWDPL-----NGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCY--SADGS-YILAGG-SSKY 604 (860)
Q Consensus 534 l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~--s~~g~-~l~~~~-~dg~ 604 (860)
|+++-++.-|..|+.. +++.+..+....- ...+..|++ .++|+ ||++++ .+.+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l------------------~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHL------------------TRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSB------------------CSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCcc------------------ccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 9999998777777754 3444444322110 013788887 56666 777776 5679
Q ss_pred EEEEECC-CceEEEEEeeccc
Q 038577 605 ICMYDVA-DQVLLRRFQITHN 624 (860)
Q Consensus 605 v~vwd~~-~~~~~~~~~~~~~ 624 (860)
+.+||.. +.+.+..|....+
T Consensus 256 ~~Vydr~~~~~~vg~f~Ig~~ 276 (355)
T 3amr_A 256 YAIYDRQGKNKYVADFRITDG 276 (355)
T ss_dssp EEEEESSTTCCEEEEEEECCC
T ss_pred EEEEECCCCCcEEEEEEecCC
Confidence 9999997 7788888876543
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.00047 Score=72.35 Aligned_cols=245 Identities=11% Similarity=0.055 Sum_probs=148.7
Q ss_pred eeEEEEEee-CCCEEEEEEccCCcEEEEEccCceEEEEecC---cccCeEEEEE-------cCCCCEEEEEeCCC-----
Q 038577 308 KITTAVFNE-LGNWLVFGCAKLGQLLVWEWRSESYILKQQG---HYFDVNCLAY-------SPDSQLLATGADDN----- 371 (860)
Q Consensus 308 ~i~~~~~s~-~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~---~~~~v~~~~~-------s~~~~~l~~~~~dg----- 371 (860)
....++|+| ++..|+++....+.|++.|.+++........ .......++| +++|..|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467889998 4666666665547788999888777655433 2235789999 99999676666544
Q ss_pred --cEEEEECCC-CeeE-----EEeecCCCceEEEEEeeC-CCEEEEEeCCCcEEEEEcc-------ccce----------
Q 038577 372 --KVKVWTVSS-GFCF-----VTFTEHTNAVTALHFMAN-NHSLLSASLDGTVRAWDLF-------RYRN---------- 425 (860)
Q Consensus 372 --~i~iwd~~~-~~~~-----~~~~~~~~~v~~i~~~~~-~~~l~s~~~dg~i~~wd~~-------~~~~---------- 425 (860)
.|.+++... +... ..+... .....++++|+ +..+++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 266665333 1211 222221 23457788995 4555566677889999997 4443
Q ss_pred -e-eEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECC--CCce--EEEecCc---c------------cCeE-EE
Q 038577 426 -F-RTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMK--TGRL--LDILSGH---E------------GPVH-GL 483 (860)
Q Consensus 426 -~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~--~~~~--~~~~~~h---~------------~~v~-~l 483 (860)
. ..+..+.......++++|+|++|+++....+.|+.++.. ++.. ...+-+. . .... .+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 1 223344444568999999999888887777799996653 3322 0222111 1 1234 44
Q ss_pred EEc-------CCCCEEEEEeCCCcEEEEEccCCcceeEEccc------------------------CCCeEEEEEeeC-C
Q 038577 484 VFS-------PTNATLASSSWDKTVRLWNVFEGKGSVESFPH------------------------THDVLTVVYRPD-G 531 (860)
Q Consensus 484 ~~s-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~v~~~~~s~~-~ 531 (860)
+.. +++.+.++-...+.|+.++ .++. +..+.+. -.....|+++++ |
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 554 4566666656677888888 3443 3333211 123678888886 6
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeE
Q 038577 532 RQLACSTLDGQIHFWDPLNGELMY 555 (860)
Q Consensus 532 ~~l~~~~~dg~i~iwd~~~~~~~~ 555 (860)
.++++=..+..|+.+++.......
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC---
T ss_pred EEEEEeCCCCEEEEEECCCCcccc
Confidence 555555556778888876655444
No 301
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.25 E-value=0.0016 Score=73.45 Aligned_cols=209 Identities=11% Similarity=-0.004 Sum_probs=136.8
Q ss_pred CCceEEEEecCCCCEEEEE-EcCCeEEEEECCCc----eeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccC
Q 038577 264 PSKVTACDYHRGLDMVVVG-FSNGVFGLYQMPDF----VCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRS 338 (860)
Q Consensus 264 ~~~v~~~~~~~~~~~l~~~-~~~g~i~~~~~~~~----~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~ 338 (860)
...+..+++++....|+.. ...+.|+.+++... .....+.........+++.+.+..|+.+....+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3467889999866665544 45578888888642 223333334456788999999988988888789999999986
Q ss_pred ceEEEEecCcccCeEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEe-CCCcE
Q 038577 339 ESYILKQQGHYFDVNCLAYSPDSQLLATGAD-D-NKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSAS-LDGTV 415 (860)
Q Consensus 339 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i 415 (860)
......+.........|++.|.+..|+.... . +.|...++........+...-.....|++++.+..|+.+. ..+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 6544444444456889999998666666553 2 6788888865444444443446789999997766666554 45678
Q ss_pred EEEEccccceeeEeeCC-CCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec
Q 038577 416 RAWDLFRYRNFRTFTTP-SSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS 474 (860)
Q Consensus 416 ~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~ 474 (860)
..+++........+... .-....++++ .+..|+.+....+.|...|..+|+.+..+.
T Consensus 583 ~~~d~dG~~~~~v~~~~~~l~~P~glav--~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 583 SSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEE--ETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEEecCCCceEEEecCCCccCCCCEEEE--eCCEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 88888554433333321 1223455665 344676766666688888877776655553
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.22 E-value=0.00053 Score=67.58 Aligned_cols=195 Identities=9% Similarity=0.093 Sum_probs=128.4
Q ss_pred CCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEee----CCCE--E-EEEEcc--CCcEEEEEcc--CceEEE
Q 038577 275 GLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNE----LGNW--L-VFGCAK--LGQLLVWEWR--SESYIL 343 (860)
Q Consensus 275 ~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~----~~~~--l-~~~~~~--~g~i~v~d~~--~~~~~~ 343 (860)
...+++.....+-+.+||+ +++.++.+.. +.+..+..-| .|+. + +++... +++|.+|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 4455666667789999999 8888888754 4566666655 2332 3 444444 5889999773 433 33
Q ss_pred EecC------cc-cCeEEEEE--cCC-CC-EEEEEeCCCcEEEEECC-------CCeeEEEeecCCCceEEEEEeeCCCE
Q 038577 344 KQQG------HY-FDVNCLAY--SPD-SQ-LLATGADDNKVKVWTVS-------SGFCFVTFTEHTNAVTALHFMANNHS 405 (860)
Q Consensus 344 ~~~~------~~-~~v~~~~~--s~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~i~~~~~~~~ 405 (860)
.+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +.+.++++.. .+.+..+...+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 3311 11 45666777 774 43 67778888999999883 3355666654 467888999988889
Q ss_pred EEEEeCCCcEEEEEcc-----ccceeeEeeCCC-CCcEEEEEE--CCCCC-EEEEEecCCCeEEEEECC-CCceEEEec
Q 038577 406 LLSASLDGTVRAWDLF-----RYRNFRTFTTPS-SRQFVSLAS--DQSGE-VICAGTLDSFEIFVWSMK-TGRLLDILS 474 (860)
Q Consensus 406 l~s~~~dg~i~~wd~~-----~~~~~~~~~~~~-~~~~~~~~~--~~~~~-~l~~~~~~~~~i~v~d~~-~~~~~~~~~ 474 (860)
|+.+-.+..|..++.. +.+.+..+.... ...+..+++ .++++ +|++++.......+||.+ +.+.+..+.
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 9999998777777754 233443333221 235677776 56666 788887665699999996 555555553
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.14 E-value=0.0017 Score=63.38 Aligned_cols=202 Identities=11% Similarity=0.100 Sum_probs=130.6
Q ss_pred CcccCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeEEEeecC-----C--CceEEEEE---eeCCCEEEEEe-----
Q 038577 347 GHYFDVNCLAYSPDSQLLATGA-DDNKVKVWTVSSGFCFVTFTEH-----T--NAVTALHF---MANNHSLLSAS----- 410 (860)
Q Consensus 347 ~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-----~--~~v~~i~~---~~~~~~l~s~~----- 410 (860)
....-..+++|.+....+..++ ..++|..|+...+......... . ..+..+.| .|+++.+++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3334456789988666666666 6899999998766443332222 1 13679999 58877766543
Q ss_pred --------CCCcEEEEEcc---ccceeeEeeCC------------CCCcEEEEEECCCCCEEEEEecC-CCeEEEEECCC
Q 038577 411 --------LDGTVRAWDLF---RYRNFRTFTTP------------SSRQFVSLASDQSGEVICAGTLD-SFEIFVWSMKT 466 (860)
Q Consensus 411 --------~dg~i~~wd~~---~~~~~~~~~~~------------~~~~~~~~~~~~~~~~l~~~~~~-~~~i~v~d~~~ 466 (860)
.+..+..||+. +++........ .......++.+++|+..++++.. + .|..++...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~-~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP-AIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC-EEEEECTTS
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC-eEEEEeCCC
Confidence 26779999998 77776655532 22347899999999999988877 6 888888764
Q ss_pred CceEEEec------CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcce-eEEc--c---cCCCeEEE-EEeeCCCE
Q 038577 467 GRLLDILS------GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGS-VESF--P---HTHDVLTV-VYRPDGRQ 533 (860)
Q Consensus 467 ~~~~~~~~------~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~--~---~~~~v~~~-~~s~~~~~ 533 (860)
. .+..+. ......+.|+++|+|..|+.....|.+..+|+...... .... + .......+ ..-.+|+.
T Consensus 169 ~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 169 K-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp C-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred C-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 4 333221 11223679999999999888877999999998854320 1111 1 11223443 33347887
Q ss_pred EEE-EeCCCeEEEEeCCC
Q 038577 534 LAC-STLDGQIHFWDPLN 550 (860)
Q Consensus 534 l~~-~~~dg~i~iwd~~~ 550 (860)
|++ ....+.+.+.+.+.
T Consensus 248 llV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 248 VLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEECSST
T ss_pred EEEEcCCCCEEEEECCCC
Confidence 444 44566666666544
No 304
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.12 E-value=0.01 Score=59.56 Aligned_cols=232 Identities=9% Similarity=0.051 Sum_probs=143.4
Q ss_pred CCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEE
Q 038577 370 DNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVI 449 (860)
Q Consensus 370 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 449 (860)
+..|.|.|+.++..+....- .--+.-.+|..+.++.-. ...+.+||+.+...++.+..+.. +.-..|-. .+.|
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi---~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~--VvfWkWis-~~~l 119 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI---SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDD--VTFWKWIS-LNTV 119 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC---CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSC--CCEEEEEE-TTEE
T ss_pred CCeEEEEECCCCCcceeccc---ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCC--ceEEEecC-CCeE
Confidence 34788889887554322211 112345678777776655 67899999999998888887653 33333332 2345
Q ss_pred EEEecCCCeEEEEECCC-CceEEEecCcc----cCeEEEEEcCCCCEEEEEeC-------CCcEEEEEccCCcceeEEcc
Q 038577 450 CAGTLDSFEIFVWSMKT-GRLLDILSGHE----GPVHGLVFSPTNATLASSSW-------DKTVRLWNVFEGKGSVESFP 517 (860)
Q Consensus 450 ~~~~~~~~~i~v~d~~~-~~~~~~~~~h~----~~v~~l~~s~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~ 517 (860)
+..+.. .|+-|++.. ..+.+.+..|. ..|..-..+++.+|++..+- .|.+.+|..+... ...+.+
T Consensus 120 ~lVT~t--aVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieG 196 (494)
T 1bpo_A 120 ALVTDN--AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEG 196 (494)
T ss_dssp EEECSS--EEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECC
T ss_pred EEEcCC--eeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchhee
Confidence 555444 799999974 45677776653 46777888999999875442 4778899987664 445555
Q ss_pred cCCCeEEEEEeeC---CCEEEEEeC---CCeEEEEeCCCCc-eeEEEecccccCCCccccccccccccCCCCcEEEEEEe
Q 038577 518 HTHDVLTVVYRPD---GRQLACSTL---DGQIHFWDPLNGE-LMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYS 590 (860)
Q Consensus 518 ~~~~v~~~~~s~~---~~~l~~~~~---dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s 590 (860)
|...-..+.+.-+ ...++.+.. .+.++|-++.... --..+. ..................++..|
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~---------kk~vdv~fppe~~~DFPvamqvs 267 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP---------KKAVDVFFPPEAQNDFPVAMQIS 267 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCC---------CEEEECCCCTTSTTCCEEEEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCcc---------ceeeeeeCCcccccCceeEEEec
Confidence 6544333322211 123333333 2678888874320 000000 00001111112334557889999
Q ss_pred cCCCEEEEecCCCeEEEEECCCceEEEEEe
Q 038577 591 ADGSYILAGGSSKYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 591 ~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~ 620 (860)
+.-..+.....-|.|.+||++++.++..-+
T Consensus 268 ~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 268 EKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp TTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ccCCEEEEEecCceEEEEecccceeeeeec
Confidence 999999999999999999999999986544
No 305
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.99 E-value=0.0057 Score=60.30 Aligned_cols=254 Identities=11% Similarity=0.089 Sum_probs=146.6
Q ss_pred ceecccccccccCCcEEEeCCCEEEeee---CCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCC------
Q 038577 3 YRFQNLLGAPYRGGNAVLSQNTKLISPV---GNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDEN------ 73 (860)
Q Consensus 3 ~~~~~~~g~~~~~~~~~~sdg~~l~~~~---~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d------ 73 (860)
+...|..|-++++|.+++ +|++|++.. ++.|...+........+.. . .+--++++|++|+.+...
T Consensus 6 ~~~gn~~~Ni~n~g~~~~-~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-~----~~~~i~~~g~~Iyy~~~~~~~~~~ 79 (302)
T 3s25_A 6 YVNGNTAGNLYNAGLFCE-SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-D----TAMYINADKNYVYYVRNNNQKITS 79 (302)
T ss_dssp CCBSSCTTTGGGTTCEEE-ETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-E----EEEEEEECSSEEEEEEECC-----
T ss_pred CCCCccccceecceEEEE-eCCEEEEEeCCCCceEEEEcCCCCCCEEccC-C----ceeeEEEcCCEEEEEECCCCcccc
Confidence 344566777788888665 777888764 5778888887766555542 1 234568999999988653
Q ss_pred --------CcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEe---C--CeEEEEeCCCCCcccceeEEEEEeecc
Q 038577 74 --------QRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGT---G--KLVQIWRSPGFKKEVFAFELIRTLADC 140 (860)
Q Consensus 74 --------~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~---~--~~i~iwd~~~~~~~~~~~~~~~~~~~h 140 (860)
..|+..++..++...... . .+..|++++++|+... + ..|+..++.+... ..+..+
T Consensus 80 ~~~~~~n~~~Iy~i~~dg~~~~~l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~--------~~lt~~ 147 (302)
T 3s25_A 80 QTFFSYDRNSLCRIKRNGHGSTVLDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK--------KKIKNH 147 (302)
T ss_dssp -CCSSCCSEEEEEEETTSCCCEEEEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC--------EEEESS
T ss_pred cceeccCCCeEEEEeCCCCcceEeec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe--------EEEeCC
Confidence 356677777665333222 2 2347888999999875 3 4566666665442 344444
Q ss_pred CCCeEEEEEcCCCCeEEEeec-CCeEEEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcCCc--c
Q 038577 141 NDKVTALNWSPDSNYLLVGSK-DLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIARDC--Y 217 (860)
Q Consensus 141 ~~~v~~l~~s~d~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg--~ 217 (860)
.. .+|+|+++.|+-.+. ...|.+-+++.. ....... +... ..+.|++. .|+-....+ .
T Consensus 148 ~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~------~~~~l~~---~~~~-~~~~P~g~-----~iy~t~~~~~~~ 208 (302)
T 3s25_A 148 YL----FTCNTSDRYFYYNNPKNGQLYRYDTASQ------SEALFYD---CNCY-KPVVLDDT-----NVYYMDVNRDNA 208 (302)
T ss_dssp CC----CCSEEETTEEEEECTTTCCEEEEETTTT------EEEEEEC---SCEE-EEEEEETT-----EEEEEEGGGTTE
T ss_pred Cc----eEeeEECCEEEEEeCCCceEEEEECCCC------CEEEEeC---CCcc-ceeeecCC-----EEEEEEcCCCcE
Confidence 32 467888988886655 466777676655 2222222 2222 23568887 777665443 4
Q ss_pred EEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEc--CCeEEEEECCC
Q 038577 218 MFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFS--NGVFGLYQMPD 295 (860)
Q Consensus 218 i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~g~i~~~~~~~ 295 (860)
|..-++++... ..+. ...+ ..++|++++|+.... .+.|...++..
T Consensus 209 I~~~~ldG~~~-----------------------------~~Lt--~~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 209 IVHVNINNPNP-----------------------------VVLT--EANI--EHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp EEEECSSSCCC-----------------------------EECS--CSCE--EEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred EEEEECCCCCe-----------------------------EEEe--CCCc--ceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 54445544321 1111 1122 237788888876533 36777777743
Q ss_pred ceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcE
Q 038577 296 FVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQL 331 (860)
Q Consensus 296 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i 331 (860)
...+.+... .+. .+++.+.++..+....+.|
T Consensus 256 -~~r~~l~~~--~~~--~i~i~~d~Iy~td~~~~~i 286 (302)
T 3s25_A 256 -TGFKELAKG--EFC--NINVTSQYVYFTDFVSNKE 286 (302)
T ss_dssp -CCCEEEEES--CEE--EEEECSSEEEEEETTTCCE
T ss_pred -CccEEeeCC--ccc--eEEEeCCEEEEEECCCCeE
Confidence 333333322 122 4556677776665443443
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.93 E-value=2.1e-05 Score=88.40 Aligned_cols=227 Identities=10% Similarity=-0.041 Sum_probs=135.9
Q ss_pred CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccC----ceEEEEecCcccCeEEEEEcCC
Q 038577 285 NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRS----ESYILKQQGHYFDVNCLAYSPD 360 (860)
Q Consensus 285 ~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~----~~~~~~~~~~~~~v~~~~~s~~ 360 (860)
.+.|+..++...+....+. ....+..++|.+.+..|+.+....+.|+.+++.. ......+.........+++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 3567777776554433322 2345678999998888888877778999998875 1211111111223456888754
Q ss_pred CC-EEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeC--CCcEEEEEccccceeeEeeCCCCCcE
Q 038577 361 SQ-LLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASL--DGTVRAWDLFRYRNFRTFTTPSSRQF 437 (860)
Q Consensus 361 ~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~--dg~i~~wd~~~~~~~~~~~~~~~~~~ 437 (860)
+. ++++-...+.|.++++........+.........+++.|.+..|+.+.. .+.|..+++... ....+........
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCc
Confidence 44 4444445678999998755444433333356778899986655554432 267777776432 2222322223345
Q ss_pred EEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEec--CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcceeE
Q 038577 438 VSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILS--GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKGSVE 514 (860)
Q Consensus 438 ~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~--~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 514 (860)
..++++|++..|+++......|..+++........+. ........|++..+ .++++....+.|..++..+++....
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEEC
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEE
Confidence 7899999888777777766699999987543333322 11233445666543 3444555567899888777664433
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.92 E-value=0.0089 Score=60.83 Aligned_cols=232 Identities=11% Similarity=0.072 Sum_probs=121.2
Q ss_pred cCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE--EEee---cCCCceEEEEEeeC---CCEEEEEeC-C-----CcE
Q 038577 350 FDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCF--VTFT---EHTNAVTALHFMAN---NHSLLSASL-D-----GTV 415 (860)
Q Consensus 350 ~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~---~~~~~v~~i~~~~~---~~~l~s~~~-d-----g~i 415 (860)
.....++|.|+|++++ +..+|.|++++ ++... ..+. ........++++|+ +..|+.+.. . +.|
T Consensus 31 ~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3467899999998555 45669999998 44322 1111 12356889999998 445544433 2 567
Q ss_pred EEEEccccc-----e-eeEee--CCCCCcEEEEEECCCCCEEEEEecC------------CCeEEEEECCCC--------
Q 038577 416 RAWDLFRYR-----N-FRTFT--TPSSRQFVSLASDQSGEVICAGTLD------------SFEIFVWSMKTG-------- 467 (860)
Q Consensus 416 ~~wd~~~~~-----~-~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~------------~~~i~v~d~~~~-------- 467 (860)
..|+..... . ...+. .........++++|+|.+.++.+.. .+.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 778776431 1 11122 1112234689999999765553321 136777776530
Q ss_pred -----ceEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcE------EEEEccCCc-----------------ceeEEccc
Q 038577 468 -----RLLDILSGHEGPVHGLVFSP-TNATLASSSWDKTV------RLWNVFEGK-----------------GSVESFPH 518 (860)
Q Consensus 468 -----~~~~~~~~h~~~v~~l~~s~-~~~~l~s~~~dg~i------~iwd~~~~~-----------------~~~~~~~~ 518 (860)
.......+|. ....++|+| ++.++++-...+.+ .+.-+..+. .......+
T Consensus 188 ~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 266 (352)
T 2ism_A 188 GRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQ 266 (352)
T ss_dssp TCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCC
Confidence 1111112332 356789999 66655554333321 233222222 01111122
Q ss_pred CCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEE
Q 038577 519 THDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILA 598 (860)
Q Consensus 519 ~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~ 598 (860)
......++| .+|.++++.-..+.|...+++.............. . .....+..+++.|||.+.++
T Consensus 267 ~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~-----------~---~~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 267 GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETA-----------L---SGFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEE-----------E---ESSCCEEEEEECTTSCEEEE
T ss_pred CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchhee-----------c---ccCCCeeEEEECCCCcEEEE
Confidence 334567777 46666555555566766666533211000000000 0 00135899999999987766
Q ss_pred ec
Q 038577 599 GG 600 (860)
Q Consensus 599 ~~ 600 (860)
..
T Consensus 332 ~~ 333 (352)
T 2ism_A 332 TS 333 (352)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.91 E-value=0.0019 Score=63.12 Aligned_cols=158 Identities=7% Similarity=0.040 Sum_probs=109.8
Q ss_pred CCCceEEEEEeeCCCEEEEEe-CCCcEEEEEccccceeeEeeCCC-------CCcEEEEEE---CCCCCEEEEEec----
Q 038577 390 HTNAVTALHFMANNHSLLSAS-LDGTVRAWDLFRYRNFRTFTTPS-------SRQFVSLAS---DQSGEVICAGTL---- 454 (860)
Q Consensus 390 ~~~~v~~i~~~~~~~~l~s~~-~dg~i~~wd~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~l~~~~~---- 454 (860)
...-..++.|.+....+..++ ..++|..|+...+..... ..+. ...+..+.+ +|+++++++...
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 334455788987555666555 789999999875544333 2222 224678999 688888776442
Q ss_pred ---------CCCeEEEEECC---CCceEEEec--Cc-----------ccCeEEEEEcCCCCEEEEEeCC-CcEEEEEccC
Q 038577 455 ---------DSFEIFVWSMK---TGRLLDILS--GH-----------EGPVHGLVFSPTNATLASSSWD-KTVRLWNVFE 508 (860)
Q Consensus 455 ---------~~~~i~v~d~~---~~~~~~~~~--~h-----------~~~v~~l~~s~~~~~l~s~~~d-g~i~iwd~~~ 508 (860)
+. .+..||+. +++.+.... .. .....+++..++|+..++++.. +.|...+...
T Consensus 90 ~~~g~~~~g~~-~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGAS-SFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCC-EEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred cccccccCCCC-EEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 34 79999999 787765443 11 1247899999999999988887 7777766554
Q ss_pred CcceeEEc------ccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 509 GKGSVESF------PHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 509 ~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
.. ...+. ......+.++++|+|+.|++....|.+..+|+.+
T Consensus 169 ~~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 169 KT-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CC-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CE-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 32 22221 1122367999999999999987799999999874
No 309
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.87 E-value=8.4e-05 Score=83.49 Aligned_cols=231 Identities=11% Similarity=-0.026 Sum_probs=136.1
Q ss_pred CCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEE-eCCCcEEEEEcccc---ceeeEeeCCCCCcEEEEEECCC
Q 038577 370 DNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSA-SLDGTVRAWDLFRY---RNFRTFTTPSSRQFVSLASDQS 445 (860)
Q Consensus 370 dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~-~~dg~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~ 445 (860)
.+.|+..++........+. ....+.+++|.+.+..|+.+ ...+.|..+++... .....+..........+++++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 3578888887665544333 33456789999876666555 45578999988651 1111111111223456888876
Q ss_pred CCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC-C-CcEEEEEccCCcceeEEcccCCCeE
Q 038577 446 GEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW-D-KTVRLWNVFEGKGSVESFPHTHDVL 523 (860)
Q Consensus 446 ~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~~~~~~v~ 523 (860)
+..|+++....+.|.++++........+.........+++.|.+.+|+.+.. . +.|..+++............-....
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 6666666555558999998765544444333355678999997665554443 2 6788887754432221112234567
Q ss_pred EEEEeeCCCEEEEEe-CCCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCC
Q 038577 524 TVVYRPDGRQLACST-LDGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS 602 (860)
Q Consensus 524 ~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d 602 (860)
.|+|+|++..|+.+. ..+.|..+++........+..... ......|++..+ .++++....
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~------------------~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR------------------LAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSS------------------CSSCCCCEEETT-EEEEECSTT
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCc------------------CCCceEeEEECC-EEEEEeCCC
Confidence 899999866665554 567899999864332222211100 011344555443 344455567
Q ss_pred CeEEEEECCCceEEEEEe
Q 038577 603 KYICMYDVADQVLLRRFQ 620 (860)
Q Consensus 603 g~v~vwd~~~~~~~~~~~ 620 (860)
+.|..++..+|+.+..+.
T Consensus 605 ~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 605 EAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TCEEEEETTTEEEEECCC
T ss_pred CeEEEEEccCCCceEEee
Confidence 899999998998776553
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.87 E-value=0.0062 Score=62.04 Aligned_cols=238 Identities=11% Similarity=0.071 Sum_probs=123.2
Q ss_pred cCCcEEEe-CCCEEEeeeCCeEEEEECCCCcEEee-----ccCCccCeeEEEEcCC---CCEEEEEcC-C-----CcEEE
Q 038577 14 RGGNAVLS-QNTKLISPVGNRVSVTDLIKSKTVTL-----PVESSSNICRIAVSPD---GTFLLTVDE-N-----QRCHF 78 (860)
Q Consensus 14 ~~~~~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~-----~~~h~~~v~~va~spd---g~~la~~~~-d-----~~i~v 78 (860)
....++|. ||+++++-..+.|.+++ +++...+ ..........|+|+|| +.+|.++.. . +.|..
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 34468999 99977776678999998 4543221 1122456889999998 555544432 2 67888
Q ss_pred EEcccCe-----EE-EEeec----CCceeEEEECCCCCEEEEEeC--------------CeEEEEeCCCCCccccee---
Q 038577 79 INLHCHV-----VL-HRVRF----KYPVNAILFSPNGKYIAVGTG--------------KLVQIWRSPGFKKEVFAF--- 131 (860)
Q Consensus 79 wd~~~~~-----~~-~~~~~----~~~v~~~~fspdg~~la~~~~--------------~~i~iwd~~~~~~~~~~~--- 131 (860)
++...+. .+ ..+.. ......++|.|||.+.++..+ +.|.-++..+.-....++
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 8876442 11 21221 123468999999976665422 456666655410000000
Q ss_pred ---EEEEEeeccCCCeEEEEEcC-CCCeEEEeecCCeE------EEEeecccccCcc------------cccceEeecCC
Q 038577 132 ---ELIRTLADCNDKVTALNWSP-DSNYLLVGSKDLAV------RLFYVKEKLKGIH------------TNKPFLLLGHR 189 (860)
Q Consensus 132 ---~~~~~~~~h~~~v~~l~~s~-d~~~l~s~~~dg~v------~vwd~~~~~~~~~------------~~~~~~~~~h~ 189 (860)
.......+|. ....++|+| ++.+.++-.....+ .+.-+..+...-+ ......+ .+.
T Consensus 190 ~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~ 267 (352)
T 2ism_A 190 RGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQG 267 (352)
T ss_dssp TTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTC
T ss_pred CCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCC
Confidence 0001112333 357889999 55544443222221 2333333310000 0112222 233
Q ss_pred CcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEE
Q 038577 190 DSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTA 269 (860)
Q Consensus 190 ~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 269 (860)
.....++| .++. .+++.-..+.|...+++.... .+.......+......+..
T Consensus 268 ~ap~G~~~-~~G~-----l~v~~~~~~~v~~v~~~~~~~----------------------~~~~~~~~~~~~~~~rp~~ 319 (352)
T 2ism_A 268 FPPGNLAF-FRGD-----LYVAGLRGQALLRLVLEGERG----------------------RWRVLRVETALSGFGRLRE 319 (352)
T ss_dssp CCEEEEEE-ETTE-----EEEEETTTTEEEEEEEEEETT----------------------EEEEEEEEEEEESSCCEEE
T ss_pred CCCcceEE-ECCE-----EEEEECCCCEEEEEEECCCCc----------------------ceeecchheecccCCCeeE
Confidence 45667777 4555 555555666777777664321 1111101111122357899
Q ss_pred EEecCCCCEEEEEE
Q 038577 270 CDYHRGLDMVVVGF 283 (860)
Q Consensus 270 ~~~~~~~~~l~~~~ 283 (860)
+++.|+|.+.++..
T Consensus 320 v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 320 VQVGPDGALYVTTS 333 (352)
T ss_dssp EEECTTSCEEEEEC
T ss_pred EEECCCCcEEEEEe
Confidence 99999997666554
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.80 E-value=0.029 Score=54.13 Aligned_cols=235 Identities=10% Similarity=0.067 Sum_probs=152.9
Q ss_pred EEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCc-eEEEEecC
Q 038577 269 ACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSE-SYILKQQG 347 (860)
Q Consensus 269 ~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~-~~~~~~~~ 347 (860)
+.-.+|..+.+|.-. ...+.++|+++.+.+....... .|.--.|-.+ +.|+..+. ..|+-|++... .+...+..
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~-~~L~lVT~--taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVTD--NAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSS-SEEEEEES--SEEEEEESSTTCCCEEEEEC
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCC-CeEEEEcC--CcEEEEcccCCCCCceeeec
Confidence 445688888777665 7889999999999988887754 5556666544 44555544 68999998753 33344433
Q ss_pred c----ccCeEEEEEcCCCCEEEEEeC-------CCcEEEEECCCCeeEEEeecCCCceEEEEEeeC--C-CEEEEEeC--
Q 038577 348 H----YFDVNCLAYSPDSQLLATGAD-------DNKVKVWTVSSGFCFVTFTEHTNAVTALHFMAN--N-HSLLSASL-- 411 (860)
Q Consensus 348 ~----~~~v~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~--~-~~l~s~~~-- 411 (860)
| ...|..-..+++.++++..+- .|.+.+|..+. +.-+.+.+|...-..+.+..+ . ..++.+..
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 3 345777778888887765442 36788999764 445566677554433332211 1 12332222
Q ss_pred -CCcEEEEEcccc--------ceeeEeeCCC---CCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccC
Q 038577 412 -DGTVRAWDLFRY--------RNFRTFTTPS---SRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGP 479 (860)
Q Consensus 412 -dg~i~~wd~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~ 479 (860)
.+.+++-++... +....+..+. ..-..++.+++.-..++.-+.-| .+++||+.++.++..-+-...+
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G-~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG-YIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTS-EEEEEETTTCCEEEEEECCSSC
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCc-EEEEEEcccCcEEEEeccCCCc
Confidence 257888888443 1111222222 34567888899889999998888 9999999999999877766777
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q 038577 480 VHGLVFSPTNATLASSSWDKTVRLWNVFEGK 510 (860)
Q Consensus 480 v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 510 (860)
|..-+.+....=++.....|.|.--.++...
T Consensus 304 iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 304 IFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred eEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 7666655554456666678877776666554
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.80 E-value=0.013 Score=59.54 Aligned_cols=250 Identities=10% Similarity=0.035 Sum_probs=127.8
Q ss_pred ceecccccccccCCcEEEe-CCCEEEeeeCCeEEEEECCCCc-EEee---ccCCccCeeEEEEcCC---CCEEEEEcC--
Q 038577 3 YRFQNLLGAPYRGGNAVLS-QNTKLISPVGNRVSVTDLIKSK-TVTL---PVESSSNICRIAVSPD---GTFLLTVDE-- 72 (860)
Q Consensus 3 ~~~~~~~g~~~~~~~~~~s-dg~~l~~~~~~~i~v~d~~~~~-~~~~---~~~h~~~v~~va~spd---g~~la~~~~-- 72 (860)
|+...+.......-.++|. ||+++++-..+.|.+++ .+++ .... ..........|+++|+ +.+|.++..
T Consensus 19 ~~~~~va~~l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~ 97 (354)
T 3a9g_A 19 FKISEVASDLEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF 97 (354)
T ss_dssp EEEEEEECSCSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred eEEEEEeCCCCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc
Confidence 4444433333344468999 99877777778999997 4554 1111 1122356889999998 444444332
Q ss_pred --C----CcEEEEEcccC-------eEE-EEee--cCCceeEEEECCCCCEEEEEeC--------------CeEEEEeCC
Q 038577 73 --N----QRCHFINLHCH-------VVL-HRVR--FKYPVNAILFSPNGKYIAVGTG--------------KLVQIWRSP 122 (860)
Q Consensus 73 --d----~~i~vwd~~~~-------~~~-~~~~--~~~~v~~~~fspdg~~la~~~~--------------~~i~iwd~~ 122 (860)
+ +.|..|+...+ +.+ ..+. .......++|.|||.+.++..+ +.|.-++..
T Consensus 98 ~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d 177 (354)
T 3a9g_A 98 AEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE 177 (354)
T ss_dssp CGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT
T ss_pred CCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC
Confidence 3 56777876654 111 2222 1123568999999987666432 356666654
Q ss_pred CCCccccee-EEEEEeeccCCCeEEEEEcC-CCCeEEEeec-CCeEEEEeecccccCc------------ccccceEeec
Q 038577 123 GFKKEVFAF-ELIRTLADCNDKVTALNWSP-DSNYLLVGSK-DLAVRLFYVKEKLKGI------------HTNKPFLLLG 187 (860)
Q Consensus 123 ~~~~~~~~~-~~~~~~~~h~~~v~~l~~s~-d~~~l~s~~~-dg~v~vwd~~~~~~~~------------~~~~~~~~~~ 187 (860)
+.-....++ .......+|.. ...++|+| ++++.++-.. ++.-.|.-+..+...- .......+..
T Consensus 178 G~~p~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 256 (354)
T 3a9g_A 178 GRPPADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGS 256 (354)
T ss_dssp SCCCTTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCCCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCC
Confidence 321000000 00011234433 47899999 5654444222 2111222222221000 0011122212
Q ss_pred CCCcEEEEEEc-------cCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccc
Q 038577 188 HRDSVVGCFFS-------VDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDF 260 (860)
Q Consensus 188 h~~~i~~~~~~-------~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (860)
.......++|. .++. ++++.-..+.|...+++.... ... ....+
T Consensus 257 ~~~ap~G~~~y~g~~fp~~~G~-----l~v~~~~~~~v~~~~~~~~g~--------------------~~~----~~~~~ 307 (354)
T 3a9g_A 257 ETWAPSGASFVHGDMFPGLRGW-----LLIACLRGSMLAAVNFGDNME--------------------VRK----ISTFF 307 (354)
T ss_dssp CCCCEEEEEECCSSSCGGGTTE-----EEEEETTTTEEEEEEECGGGC--------------------EEE----EEEEC
T ss_pred CCcCCcceEEECCCCCcccCCc-----EEEEEcCCCEEEEEEECCCCc--------------------ccc----eeeec
Confidence 23457788884 3454 666666667777777764210 000 01112
Q ss_pred cCCCCceEEEEecCCCCEEEEEE
Q 038577 261 SQAPSKVTACDYHRGLDMVVVGF 283 (860)
Q Consensus 261 ~~~~~~v~~~~~~~~~~~l~~~~ 283 (860)
......+..+++.|||.+.++..
T Consensus 308 ~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 308 KNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp TTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCCCeeEEEECCCCcEEEEEe
Confidence 22345789999999997665553
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.74 E-value=0.024 Score=57.56 Aligned_cols=229 Identities=13% Similarity=0.007 Sum_probs=126.1
Q ss_pred CceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce-EEEEec---CcccCeEEEEEcCC---CCEEEEEeC----C----
Q 038577 306 REKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES-YILKQQ---GHYFDVNCLAYSPD---SQLLATGAD----D---- 370 (860)
Q Consensus 306 ~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~-~~~~~~---~~~~~v~~~~~s~~---~~~l~~~~~----d---- 370 (860)
-.....++|.|+|+.+ ++... |.|.+++. ++. .+..+. ........++++|+ +..|.++.. +
T Consensus 28 l~~P~~ia~~pdG~l~-V~e~~-g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYL-VTERP-GRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTEEE-EEETT-TEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCeEE-EEeCC-CEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 3467899999999844 44444 89999873 444 222211 12345789999997 455554443 2
Q ss_pred CcEEEEECCCC-------eeE-EEeec-CCCceEEEEEeeCCCEEEEEeCC-------------CcEEEEEccccc----
Q 038577 371 NKVKVWTVSSG-------FCF-VTFTE-HTNAVTALHFMANNHSLLSASLD-------------GTVRAWDLFRYR---- 424 (860)
Q Consensus 371 g~i~iwd~~~~-------~~~-~~~~~-~~~~v~~i~~~~~~~~l~s~~~d-------------g~i~~wd~~~~~---- 424 (860)
+.|..|+.... +.+ ..+.. .......++|.|||..+++.+.. |.|..++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 56777876643 111 11221 11234679999999876665432 345444443210
Q ss_pred ---eeeEeeCCCCCcEEEEEECC-CCCEEEEEecCC--CeEEEEECCC----------------CceEEEecCcccCeEE
Q 038577 425 ---NFRTFTTPSSRQFVSLASDQ-SGEVICAGTLDS--FEIFVWSMKT----------------GRLLDILSGHEGPVHG 482 (860)
Q Consensus 425 ---~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~--~~i~v~d~~~----------------~~~~~~~~~h~~~v~~ 482 (860)
....+... ......++++| +|.++++-...+ ..|.+..... ..++..+.........
T Consensus 185 pf~~~~i~a~G-~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYG-HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp SSTTCCEEEEC-CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCCcEEEEc-cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 01111111 12346789999 666555533322 1344432110 0122333112345778
Q ss_pred EEEc-------CCCCEEEEEeCCCcEEEEEccCCcce---eEEcc-cCCCeEEEEEeeCCCEEEEEe
Q 038577 483 LVFS-------PTNATLASSSWDKTVRLWNVFEGKGS---VESFP-HTHDVLTVVYRPDGRQLACST 538 (860)
Q Consensus 483 l~~s-------~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~-~~~~v~~~~~s~~~~~l~~~~ 538 (860)
++|. .+|.++++.-..+.|...++...... ..+.. ....+..+++.|||.+.++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 8883 46777776666778888888753212 12222 245789999999997666654
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.70 E-value=0.0042 Score=61.92 Aligned_cols=230 Identities=10% Similarity=0.077 Sum_probs=118.9
Q ss_pred CCCEEEEEe-CC-----CcEEEEECCCCeeEEE--eecCCCceEEEEEeeCCCEEEEEeCC-----CcEEEEEccccc--
Q 038577 360 DSQLLATGA-DD-----NKVKVWTVSSGFCFVT--FTEHTNAVTALHFMANNHSLLSASLD-----GTVRAWDLFRYR-- 424 (860)
Q Consensus 360 ~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d-----g~i~~wd~~~~~-- 424 (860)
++..++.|+ .+ ..+.+||+.+.+-... +....... ++ ...++..++.||.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-AS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cE-EEECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 344556665 22 3688899877653321 11111111 22 22356677777755 368899987765
Q ss_pred -eeeEeeCCCCCcEEEEEECCCCCEEEEEecCC----CeEEEEECCCCceEEE--ecCcccCeEEEEEcCCCCEEEEEeC
Q 038577 425 -NFRTFTTPSSRQFVSLASDQSGEVICAGTLDS----FEIFVWSMKTGRLLDI--LSGHEGPVHGLVFSPTNATLASSSW 497 (860)
Q Consensus 425 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~i~v~d~~~~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~~~ 497 (860)
-...-..+....-.+++. .++++++.|+.++ ..+.+||..+.+-... +......-..+.+ ++++++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCC
Confidence 222222222211122222 2566777776543 2689999887654432 2211111122222 6777777765
Q ss_pred C-----CcEEEEEccCCcceeEEc-cc-CCCeEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCceeEEEecccccCC
Q 038577 498 D-----KTVRLWNVFEGKGSVESF-PH-THDVLTVVYRPDGRQLACSTLD-----GQIHFWDPLNGELMYTIEGRRDISG 565 (860)
Q Consensus 498 d-----g~i~iwd~~~~~~~~~~~-~~-~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~ 565 (860)
+ ..+.+||+.+.+-..... .. ......+ .-++++++.|+.+ ..+.+||+.+.+-...-.....
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~--- 243 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVA--LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP--- 243 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC---
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEE--EECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc---
Confidence 4 458889987764221111 11 1111222 2367777777654 4589999987654322111000
Q ss_pred CccccccccccccCCCCcEEEEEEecCCCEEEEecCC-----CeEEEEECCCceEE
Q 038577 566 GRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS-----KYICMYDVADQVLL 616 (860)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d-----g~v~vwd~~~~~~~ 616 (860)
......+. -+++.++.|+.+ ..+.+||+++.+-.
T Consensus 244 ---------------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 244 ---------------RCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDSWE 282 (301)
T ss_dssp ---------------CBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTEEE
T ss_pred ---------------ccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCeEE
Confidence 00112222 377777888765 46889999887644
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.68 E-value=0.0025 Score=63.58 Aligned_cols=215 Identities=13% Similarity=0.174 Sum_probs=113.1
Q ss_pred CcEEEEEccCceEEEEec--CcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe---eEE--EeecCCCceEE
Q 038577 329 GQLLVWEWRSESYILKQQ--GHYFDVNCLAYSPDSQLLATGADD-----NKVKVWTVSSGF---CFV--TFTEHTNAVTA 396 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~---~~~--~~~~~~~~v~~ 396 (860)
..+.+||..+++...... ........+. .++..++.|+.+ ..+.+||..+.. -.. .+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 468889988776543221 1111112222 356677777754 468999988765 222 22111112222
Q ss_pred EEEeeCCCEEEEEeCCC-----cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC----CeEEEEECCCC
Q 038577 397 LHFMANNHSLLSASLDG-----TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS----FEIFVWSMKTG 467 (860)
Q Consensus 397 i~~~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~i~v~d~~~~ 467 (860)
+. .+++.++.||.++ .+.+||+.+.+-...-..+....-.+++. .++++++.|+.++ ..+.+||+.+.
T Consensus 109 ~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 109 TT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EE--ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22 2566777776543 58888887655333222222222122222 2667777776542 26899999877
Q ss_pred ceEEEe--cCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCcceeEEc-c-cCCCeEEEEEeeCCCEEEEEe
Q 038577 468 RLLDIL--SGHEGPVHGLVFSPTNATLASSSWD-----KTVRLWNVFEGKGSVESF-P-HTHDVLTVVYRPDGRQLACST 538 (860)
Q Consensus 468 ~~~~~~--~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~ 538 (860)
+-...- ......-..+.+ ++++++.|+.+ ..+.+||+.+.+-..... . .......+ .-++++++.|+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~i~v~GG 261 (301)
T 2vpj_A 186 HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGAT--VLRGRLYAIAG 261 (301)
T ss_dssp EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EETTEEEEECC
T ss_pred cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEE--EECCEEEEEcC
Confidence 654332 111111122222 66777777764 468999987764221111 1 11112222 23777777776
Q ss_pred CC-----CeEEEEeCCCCc
Q 038577 539 LD-----GQIHFWDPLNGE 552 (860)
Q Consensus 539 ~d-----g~i~iwd~~~~~ 552 (860)
.+ ..+.+||+.+.+
T Consensus 262 ~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BCSSSBEEEEEEEETTTTE
T ss_pred cCCCcccccEEEEcCCCCe
Confidence 55 358889987764
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.68 E-value=0.005 Score=71.53 Aligned_cols=283 Identities=16% Similarity=0.142 Sum_probs=174.3
Q ss_pred EEEeCCCEEEee----eCCeEEEEECCCCcEEe-eccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeec
Q 038577 18 AVLSQNTKLISP----VGNRVSVTDLIKSKTVT-LPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRF 92 (860)
Q Consensus 18 ~~~sdg~~l~~~----~~~~i~v~d~~~~~~~~-~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~ 92 (860)
+.+...+++++- .++.|.|.|+.++.... .+..- -+.-.+|..+.||.-. ..++.|+|+++.+.+..+..
T Consensus 30 ~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~rrpi~A----dsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~ 104 (1630)
T 1xi4_A 30 LTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM 104 (1630)
T ss_pred eeeecCceEEEEecCCCCceEEEEECCCCCCcccccccc----hhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc
Confidence 344345566653 23579999999876532 22122 2344678888777654 68999999999998888887
Q ss_pred CCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEee-------cCCeE
Q 038577 93 KYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGS-------KDLAV 165 (860)
Q Consensus 93 ~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~-------~dg~v 165 (860)
..+|..=.|-. .+.|+...+..|+-|++.+...+..-+.....+. ...|..-..+++.++++..| -.|.+
T Consensus 105 ~e~VvfWkWis-~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~--~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~m 181 (1630)
T 1xi4_A 105 TDDVTFWKWIS-LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAM 181 (1630)
T ss_pred CCCceEEEecC-CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcc--cCeeEEeeeCCCCCeEEEEeeccCCCccccee
Confidence 78887777764 3567777899999999976443222222222332 35677888889998887543 34789
Q ss_pred EEEeecccccCcccccceEeecCCCcEEEEEEccCCCCCccceEEEEcC---CccEEEeeecCC-CCCCccccCCCCCCC
Q 038577 166 RLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIAR---DCYMFSWGFSGN-DGKIDETMEDSEPPS 241 (860)
Q Consensus 166 ~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~~---dg~i~~w~~~~~-~~~~~~~~~~~~~~~ 241 (860)
.+|..+.. ....+.||.+....+....+. .....+..+.. .+.+.+-++... ....
T Consensus 182 QLyS~er~-------~sQ~iegha~~F~~~~~~~~~--~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~----------- 241 (1630)
T 1xi4_A 182 QLYSVDRK-------VSQPIEGHAASFAQFKMEGNA--EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ----------- 241 (1630)
T ss_pred eeeecccc-------cchhhhHhHhhhheeccCCCC--CCceEEEEEEecCCCceEEEEecCCCccCCC-----------
Confidence 99998876 456677787766544432211 11112222222 267777777543 1100
Q ss_pred CCCCcceeeeEEeeeecccc--CCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCceeEEEEeecCceeEEEEEeeCCC
Q 038577 242 PGTPERRVKKWGLLRKDDFS--QAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVCIHLLSISREKITTAVFNELGN 319 (860)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 319 (860)
.... +. ....++ ....-..++..++.-..+...+.-|.+.+||+.++.++..-+.....|...+......
T Consensus 242 --~f~k--k~----~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~ 313 (1630)
T 1xi4_A 242 --PFPK--KA----VDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATA 313 (1630)
T ss_pred --CCcc--cc----ccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCC
Confidence 0000 00 000111 1234566788888888999999999999999999999887777666666555554433
Q ss_pred EEEEEEccCCcEEEEEcc
Q 038577 320 WLVFGCAKLGQLLVWEWR 337 (860)
Q Consensus 320 ~l~~~~~~~g~i~v~d~~ 337 (860)
-++..... |.|.--.+.
T Consensus 314 g~~~vnr~-G~vl~v~v~ 330 (1630)
T 1xi4_A 314 GIIGVNRK-GQVLSVCVE 330 (1630)
T ss_pred ceEEEcCC-ceEEEEEEc
Confidence 33333332 544444333
No 317
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.60 E-value=0.059 Score=54.74 Aligned_cols=146 Identities=10% Similarity=0.041 Sum_probs=79.8
Q ss_pred CCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee------CCCCCcEEEEEECCC---CCEEEEEecC------
Q 038577 391 TNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT------TPSSRQFVSLASDQS---GEVICAGTLD------ 455 (860)
Q Consensus 391 ~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~------~~~~~~~~~~~~~~~---~~~l~~~~~~------ 455 (860)
-...+.|+|.|+|+.++.+...|.|++++.. ++....+. .........++++|+ +..|++....
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3457899999999845556678999998853 32211111 122335688999996 5555554321
Q ss_pred -CCeEEEEECCCC--ce--EE-EecC------cccCeEEEEEcCCCCEEEEEeCC-------------CcEEEEEccCCc
Q 038577 456 -SFEIFVWSMKTG--RL--LD-ILSG------HEGPVHGLVFSPTNATLASSSWD-------------KTVRLWNVFEGK 510 (860)
Q Consensus 456 -~~~i~v~d~~~~--~~--~~-~~~~------h~~~v~~l~~s~~~~~l~s~~~d-------------g~i~iwd~~~~~ 510 (860)
...|..|+...+ +. .. .+.. .......++|.|||.+.++.+.. |.|.-++....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 126777776533 11 11 1111 01123579999999766665432 456666654320
Q ss_pred ------------ceeEEcccCCCeEEEEEeeCCCEEEEE
Q 038577 511 ------------GSVESFPHTHDVLTVVYRPDGRQLACS 537 (860)
Q Consensus 511 ------------~~~~~~~~~~~v~~~~~s~~~~~l~~~ 537 (860)
..............++|+|+...|.++
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEE
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEE
Confidence 011111122346789999943344444
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.58 E-value=0.022 Score=57.14 Aligned_cols=205 Identities=10% Similarity=0.118 Sum_probs=123.1
Q ss_pred CeEEEEEcCCCCEEEEE------------eCCCcEEEEECCC--CeeE-EEeec-----CCCceEEEEEee--CCC-EEE
Q 038577 351 DVNCLAYSPDSQLLATG------------ADDNKVKVWTVSS--GFCF-VTFTE-----HTNAVTALHFMA--NNH-SLL 407 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~~~------------~~dg~i~iwd~~~--~~~~-~~~~~-----~~~~v~~i~~~~--~~~-~l~ 407 (860)
....+++.|+|..++++ ..+|.|.++|+.+ ++.. ..+.+ ..-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34567778877554444 1689999999873 2221 12222 234678888876 343 444
Q ss_pred EEe-C--CCcEEEEEccccc----eeeEeeCCCCCcEEEEEECCCCCEEEEEec----------------CCCeEEEEEC
Q 038577 408 SAS-L--DGTVRAWDLFRYR----NFRTFTTPSSRQFVSLASDQSGEVICAGTL----------------DSFEIFVWSM 464 (860)
Q Consensus 408 s~~-~--dg~i~~wd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~i~v~d~ 464 (860)
.+. . +.++.+|++.... .+..+....-.....+.+.++|.+.+.... ..+.++.+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 443 2 4578888876532 233444444556789999999998776541 1235666665
Q ss_pred CCCceEEEecCcccCeEEEEEcCCCCEEEEEe-CCCcEEEEEccCCcce--eEEcccCCCeEEEEEee-CCCEEEEEeCC
Q 038577 465 KTGRLLDILSGHEGPVHGLVFSPTNATLASSS-WDKTVRLWNVFEGKGS--VESFPHTHDVLTVVYRP-DGRQLACSTLD 540 (860)
Q Consensus 465 ~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 540 (860)
++.. .+...-...+.++|+||++.|..+. ..+.|..|++...... ..........-.+++.+ +|++.+++..+
T Consensus 211 --~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 211 --NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp --TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred --CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 3332 2222345578999999998877665 4688999998642212 11223355677889998 59877766544
Q ss_pred -CeEEEEeCC--CCceeEEEe
Q 038577 541 -GQIHFWDPL--NGELMYTIE 558 (860)
Q Consensus 541 -g~i~iwd~~--~~~~~~~~~ 558 (860)
+.|..|+.. .+..+..++
T Consensus 288 g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 288 GMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp HHHHHSCCTTSCCCEEEEEEE
T ss_pred ceEEEEECCCCCCCCEEEEEE
Confidence 345555654 244444444
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.55 E-value=0.006 Score=61.35 Aligned_cols=145 Identities=12% Similarity=0.158 Sum_probs=95.5
Q ss_pred CCCEEEeeeCCeEEEEECCCCcEEeec-cCC---ccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCe------------
Q 038577 22 QNTKLISPVGNRVSVTDLIKSKTVTLP-VES---SSNICRIAVSPDGTFLLTVDENQRCHFINLHCHV------------ 85 (860)
Q Consensus 22 dg~~l~~~~~~~i~v~d~~~~~~~~~~-~~h---~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~------------ 85 (860)
+|..++++.++.||.-++..+...+.+ ..+ -..|..+..||+|++||..+. ..|.|-.+..+.
T Consensus 31 n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 31 NGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccccc
Confidence 999999999999999998854432222 122 236899999999999999875 578888776221
Q ss_pred EEEEee-------cCCceeEEEECCCC---CEEEE-EeCCeEEEEeCCCCCcccceeE-E--EEEeeccCCCeEEEEEcC
Q 038577 86 VLHRVR-------FKYPVNAILFSPNG---KYIAV-GTGKLVQIWRSPGFKKEVFAFE-L--IRTLADCNDKVTALNWSP 151 (860)
Q Consensus 86 ~~~~~~-------~~~~v~~~~fspdg---~~la~-~~~~~i~iwd~~~~~~~~~~~~-~--~~~~~~h~~~v~~l~~s~ 151 (860)
..+.+. ...+|..+.|+|-+ ..|++ ..|+.|++||+.........+. . ...+..+...|.+++|.+
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC
Confidence 223333 14679999999944 34444 4899999999986332111000 0 011122336688999999
Q ss_pred CCCeEEEee--cCCeEEE
Q 038577 152 DSNYLLVGS--KDLAVRL 167 (860)
Q Consensus 152 d~~~l~s~~--~dg~v~v 167 (860)
++-.|...+ ..|.|.-
T Consensus 190 ~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 190 DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TSSCEEEEECTTSCEEEE
T ss_pred CCcEEEEEecCCCCCEEE
Confidence 876666544 6676654
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.54 E-value=0.059 Score=53.80 Aligned_cols=250 Identities=8% Similarity=0.007 Sum_probs=130.4
Q ss_pred EEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccce----EeecCCCcEEEEEEccC---CCCCccc
Q 038577 135 RTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPF----LLLGHRDSVVGCFFSVD---KKTDKVN 207 (860)
Q Consensus 135 ~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~----~~~~h~~~i~~~~~~~~---~~~~~~~ 207 (860)
..+...-...+.|+|.|||+++++--..|.|++++...+ .. .... ...........++++|+ +.
T Consensus 25 ~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g-~~---~~v~~~~~v~~~g~~GllGia~~Pdf~~~g----- 95 (347)
T 3das_A 25 RTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG-RK---TELGEVPGVSPSGEGGLLGIALSPDYASDH----- 95 (347)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTC-CE---EEEEECTTCCCBTTBSEEEEEECTTHHHHC-----
T ss_pred EEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCC-cE---eeecccCceeecCCCCceeeEeccccccCC-----
Confidence 344444556789999999987666554899998876544 11 1111 12234567899999985 22
Q ss_pred eEEEE---cCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCEEEEEEc
Q 038577 208 RIYTI---ARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDMVVVGFS 284 (860)
Q Consensus 208 ~l~s~---~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 284 (860)
.|+.. ..++.|.-|......... .........+.-... ........+.|.|+|.+.++.+.
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~~~~~~~------------~~~~~~~~i~~~~p~----~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYDEKKPSG------------EQLGAPDTVFRGIPK----GVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBCTTSCTT------------CCBCCCEEEEEEECC----CSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEEEEecCCCCEEEEEEeCCCCccc------------ccCCCcEEEEEcCCC----CCCccCccccCCCCCCEEEEECC
Confidence 45443 234555555554321100 000000011111111 11224567999999976665432
Q ss_pred -------------CCeEEEEECCCce-------eEEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCce----
Q 038577 285 -------------NGVFGLYQMPDFV-------CIHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSES---- 340 (860)
Q Consensus 285 -------------~g~i~~~~~~~~~-------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~---- 340 (860)
.|.|.-++....- ....+.........++|+|+|...++-...++.=.+--+..+.
T Consensus 160 ~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGw 239 (347)
T 3das_A 160 SGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGW 239 (347)
T ss_dssp TTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCT
T ss_pred CCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecC
Confidence 3566666653210 1112233334567889999877665544333322222222211
Q ss_pred --------------EEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCee----EEEeecCCCceEEEEEeeC
Q 038577 341 --------------YILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFC----FVTFTEHTNAVTALHFMAN 402 (860)
Q Consensus 341 --------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~i~~~~~ 402 (860)
.+..+..+......++|. +|..++..-..+.|....+..... ...+.+....+.+++..||
T Consensus 240 P~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD 318 (347)
T 3das_A 240 PEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG 318 (347)
T ss_dssp TTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET
T ss_pred CcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC
Confidence 111122122245567776 455666666666777666654432 2334444568999999999
Q ss_pred CCEEEEEe
Q 038577 403 NHSLLSAS 410 (860)
Q Consensus 403 ~~~l~s~~ 410 (860)
|..+++..
T Consensus 319 G~lyv~td 326 (347)
T 3das_A 319 DKLWLVTS 326 (347)
T ss_dssp TEEEEEEC
T ss_pred CcEEEEEc
Confidence 96655543
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.53 E-value=0.0079 Score=59.94 Aligned_cols=229 Identities=13% Similarity=0.092 Sum_probs=115.1
Q ss_pred CEEEEEEcC----CeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccC----CcEEEEEccCceEEEEecC-
Q 038577 277 DMVVVGFSN----GVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKL----GQLLVWEWRSESYILKQQG- 347 (860)
Q Consensus 277 ~~l~~~~~~----g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~----g~i~v~d~~~~~~~~~~~~- 347 (860)
..++.|+.+ ..+..||..+.+-...-..........+...++..+++++... ..+.+||..+.+.......
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p 96 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR 96 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC
Confidence 345555543 4678888877654332222222222222233555555555331 4688999888765443221
Q ss_pred -cccCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCeeEEE--eecCCCceEEEEEeeCCCEEEEEeCC-------
Q 038577 348 -HYFDVNCLAYSPDSQLLATGADDN-----KVKVWTVSSGFCFVT--FTEHTNAVTALHFMANNHSLLSASLD------- 412 (860)
Q Consensus 348 -~~~~v~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d------- 412 (860)
......++.+ ++..++.|+.++ .+.+||+.+.+-... +....... +++. -+++.++.||.+
T Consensus 97 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 97 DRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp SCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEETTTTEEC
T ss_pred ccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCCCCCCccc
Confidence 1111222222 567777777553 578888877653332 11111111 2222 356666666643
Q ss_pred CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC----CeEEEEECCCCceEEEecCcccCeEEEEEcCC
Q 038577 413 GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS----FEIFVWSMKTGRLLDILSGHEGPVHGLVFSPT 488 (860)
Q Consensus 413 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~ 488 (860)
..+.+||+.+.+-...-..+......+++. -++++++.|+.++ ..+.+||..+.+-...-.........-+...+
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 251 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVN 251 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEEC
Confidence 358889987654332222222211122222 2567777776542 26999999877544322111111111111226
Q ss_pred CCEEEEEeCCC-----cEEEEEccCCc
Q 038577 489 NATLASSSWDK-----TVRLWNVFEGK 510 (860)
Q Consensus 489 ~~~l~s~~~dg-----~i~iwd~~~~~ 510 (860)
+++++.|+.++ .+.+||+.+.+
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CEEEEECCcCCCcccccEEEEcCCCCe
Confidence 77777777553 47888887654
No 322
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.52 E-value=0.012 Score=59.05 Aligned_cols=194 Identities=11% Similarity=0.096 Sum_probs=115.1
Q ss_pred eEEEEecCCCCEEEEE------------EcCCeEEEEECCCc-eeEEEEeec-------CceeEEEEEee--CCC-EEEE
Q 038577 267 VTACDYHRGLDMVVVG------------FSNGVFGLYQMPDF-VCIHLLSIS-------REKITTAVFNE--LGN-WLVF 323 (860)
Q Consensus 267 v~~~~~~~~~~~l~~~------------~~~g~i~~~~~~~~-~~~~~~~~~-------~~~i~~~~~s~--~~~-~l~~ 323 (860)
...++..|+|..+++. ..+|.|.++|..+. .....+... .-....+.+.+ +|. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4456667776444433 26899999998732 112222221 23567777766 454 4555
Q ss_pred EEcc--CCcEEEEEccCc--e--EEEEecC-cccCeEEEEEcCCCCEEEEEeC-----------------CCcEEEEECC
Q 038577 324 GCAK--LGQLLVWEWRSE--S--YILKQQG-HYFDVNCLAYSPDSQLLATGAD-----------------DNKVKVWTVS 379 (860)
Q Consensus 324 ~~~~--~g~i~v~d~~~~--~--~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~iwd~~ 379 (860)
+... ...+.+|++..+ . .+..+.+ .....+.+.+.++|.+.++... .|.|..++.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 4433 467778776543 2 2223332 2345788999999987776541 244555554
Q ss_pred CCeeEEEeecCCCceEEEEEeeCCCEEEEEe-CCCcEEEEEccc-cc--eeeEeeCCCCCcEEEEEECC-CCCEEEEEec
Q 038577 380 SGFCFVTFTEHTNAVTALHFMANNHSLLSAS-LDGTVRAWDLFR-YR--NFRTFTTPSSRQFVSLASDQ-SGEVICAGTL 454 (860)
Q Consensus 380 ~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~-~dg~i~~wd~~~-~~--~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~ 454 (860)
++.. .+...-...+.++|+||++.++.+. ..+.|..|++.. ++ ..+.+.. ......+++++ +|++.+++..
T Consensus 211 -~~~~-~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~--~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 211 -NDVR-VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF--DTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp -TCCE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC--SSEEEEEEECTTTCCEEEEEES
T ss_pred -CeEE-EeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC--CCCCceEEEeCCCCcEEEEecC
Confidence 3322 2323345678999999998777654 567899999863 22 2233322 45678899999 5998877765
Q ss_pred CCCeEEEEECC
Q 038577 455 DSFEIFVWSMK 465 (860)
Q Consensus 455 ~~~~i~v~d~~ 465 (860)
+++.|..|+..
T Consensus 287 ~g~~v~~~~P~ 297 (355)
T 3sre_A 287 NGMRIFFYDAE 297 (355)
T ss_dssp CHHHHHSCCTT
T ss_pred CceEEEEECCC
Confidence 55455555543
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.51 E-value=0.008 Score=59.89 Aligned_cols=216 Identities=14% Similarity=0.164 Sum_probs=110.9
Q ss_pred CcEEEEEccCceEEEEe--cCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeeEEEe--ecCCCceEEEEE
Q 038577 329 GQLLVWEWRSESYILKQ--QGHYFDVNCLAYSPDSQLLATGADD-----NKVKVWTVSSGFCFVTF--TEHTNAVTALHF 399 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~--~~~~~~v~~i~~ 399 (860)
..+..||..+.+....- ......-..+.+ ++..++.|+.+ ..+.+||..+.+-...- .........+.
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~- 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV- 106 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-
Confidence 45788888877644332 111111122222 56677777754 35888998876533221 11111112222
Q ss_pred eeCCCEEEEEeCCC-----cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC------CeEEEEECCCCc
Q 038577 400 MANNHSLLSASLDG-----TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS------FEIFVWSMKTGR 468 (860)
Q Consensus 400 ~~~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~i~v~d~~~~~ 468 (860)
-+++.++.||.++ .+.+||+.+.+-...-..+......+++. -++++++.|+.++ ..+.+||..+.+
T Consensus 107 -~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 107 -LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp -ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred -ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 3566777777654 47788877654333222222222122222 2566666665422 258999998775
Q ss_pred eEEE--ecCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCcceeEEcccC-CCeEEEEEeeCCCEEEEEeCC
Q 038577 469 LLDI--LSGHEGPVHGLVFSPTNATLASSSWD-----KTVRLWNVFEGKGSVESFPHT-HDVLTVVYRPDGRQLACSTLD 540 (860)
Q Consensus 469 ~~~~--~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d 540 (860)
-... +......-..+.+ ++++++.|+.+ ..+.+||+.+.+-.. ..... ......+..-++++++.|+.+
T Consensus 185 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVCAVNGLLYVVGGDD 261 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEEEECCEEEEECCcC
Confidence 4432 2111111122222 67777777754 368899987764211 11111 111111222377777777755
Q ss_pred C-----eEEEEeCCCCc
Q 038577 541 G-----QIHFWDPLNGE 552 (860)
Q Consensus 541 g-----~i~iwd~~~~~ 552 (860)
+ .+.+||+.+.+
T Consensus 262 ~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 262 GSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSBCCCEEEEETTTTE
T ss_pred CCcccccEEEEcCCCCe
Confidence 3 48899987764
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.50 E-value=0.034 Score=64.89 Aligned_cols=229 Identities=9% Similarity=0.059 Sum_probs=134.2
Q ss_pred CcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEE
Q 038577 371 NKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVIC 450 (860)
Q Consensus 371 g~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 450 (860)
..|.|.|+.++..+... .-.--+...+|..+.++.-. ..++.+||+.+...++.+..+. .+.-..|-.+. .|+
T Consensus 48 ~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e--~VvfWkWis~~-~l~ 120 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD--DVTFWKWISLN-TVA 120 (1630)
T ss_pred ceEEEEECCCCCCcccc---cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC--CceEEEecCCC-eeE
Confidence 47888888876543211 11112344677776666554 6789999999888887777655 34555554333 333
Q ss_pred EEecCCCeEEEEECCC-CceEEEecCc----ccCeEEEEEcCCCCEEEEEe-------CCCcEEEEEccCCcceeEEccc
Q 038577 451 AGTLDSFEIFVWSMKT-GRLLDILSGH----EGPVHGLVFSPTNATLASSS-------WDKTVRLWNVFEGKGSVESFPH 518 (860)
Q Consensus 451 ~~~~~~~~i~v~d~~~-~~~~~~~~~h----~~~v~~l~~s~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~ 518 (860)
..+.. .|+.|++.. ..+.+.+..| ...|..-..+++.+|++..| -.|.+.+|+++.+. ...+.+|
T Consensus 121 lVT~~--aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegh 197 (1630)
T 1xi4_A 121 LVTDN--AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH 197 (1630)
T ss_pred EEcCC--eEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHh
Confidence 33333 799999974 3454555444 45677788899999977544 34789999987654 3333344
Q ss_pred CCCeEEEEEe--eC-CCEEEEEeC---CCeEEEEeCCCC-ceeEEEecccccCCCccccccccccccCCCCcEEEEEEec
Q 038577 519 THDVLTVVYR--PD-GRQLACSTL---DGQIHFWDPLNG-ELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSA 591 (860)
Q Consensus 519 ~~~v~~~~~s--~~-~~~l~~~~~---dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~ 591 (860)
.+.-..+... +. ...++.+.. .+.++|-++... .--..+.. .......+....+....++..|+
T Consensus 198 a~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~k---------k~~~~~~~~~~~~Dfpv~~~vs~ 268 (1630)
T 1xi4_A 198 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK---------KAVDVFFPPEAQNDFPVAMQISE 268 (1630)
T ss_pred HhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcc---------ccccccCCcccccCcceEEEecc
Confidence 4333222221 11 112222211 267888887442 10000000 00000111112334567888898
Q ss_pred CCCEEEEecCCCeEEEEECCCceEEEE
Q 038577 592 DGSYILAGGSSKYICMYDVADQVLLRR 618 (860)
Q Consensus 592 ~g~~l~~~~~dg~v~vwd~~~~~~~~~ 618 (860)
.-..+...+.-|.|.+||+.+|.++-.
T Consensus 269 k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 269 KHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred ccCEEEEEecCceEEEEecccchhhhh
Confidence 888899999999999999999988753
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.46 E-value=0.0094 Score=59.51 Aligned_cols=215 Identities=10% Similarity=0.039 Sum_probs=113.4
Q ss_pred CcEEEEEccCceEEEEec--CcccCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCeeEEE--eecCCCceEEEEEe
Q 038577 329 GQLLVWEWRSESYILKQQ--GHYFDVNCLAYSPDSQLLATGADD----NKVKVWTVSSGFCFVT--FTEHTNAVTALHFM 400 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~ 400 (860)
..+.+||..+++....-. .....-..+. -++..++.|+.+ ..+.+||..+.+-... +.........+ .
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~ 99 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--A 99 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--E
T ss_pred ceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--E
Confidence 578899988876543221 1111122222 256677777754 5788999887653322 21111111222 2
Q ss_pred eCCCEEEEEeCC------CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecC--------CCeEEEEECCC
Q 038577 401 ANNHSLLSASLD------GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLD--------SFEIFVWSMKT 466 (860)
Q Consensus 401 ~~~~~l~s~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~i~v~d~~~ 466 (860)
-+++.++.||.+ ..+.+||..+.+-...-..+....-.+++. -++++++.|+.+ -..+.+||..+
T Consensus 100 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 100 AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCC
Confidence 366677777765 458889987765333222222222122222 256666666532 12589999988
Q ss_pred CceEEEecCcc--cCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCcceeE--EcccCCCeEEEEEeeCCCEEEEE
Q 038577 467 GRLLDILSGHE--GPVHGLVFSPTNATLASSSWD-----KTVRLWNVFEGKGSVE--SFPHTHDVLTVVYRPDGRQLACS 537 (860)
Q Consensus 467 ~~~~~~~~~h~--~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~ 537 (860)
.+-...-.... ..-..+.+ ++++++.|+.+ ..+.+||+.+.+-... ..........+.+ ++++++.|
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 254 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLA 254 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEE
T ss_pred CeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEe
Confidence 75443321111 11122222 66777777653 4588899877641111 1111112222333 77788888
Q ss_pred eCC-----CeEEEEeCCCCc
Q 038577 538 TLD-----GQIHFWDPLNGE 552 (860)
Q Consensus 538 ~~d-----g~i~iwd~~~~~ 552 (860)
+.+ ..+.+||+.+.+
T Consensus 255 G~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 255 GFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CBCSSSBCCEEEEEETTTTE
T ss_pred CcCCCeeeeeEEEEcCCCCe
Confidence 754 468899988764
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.45 E-value=0.011 Score=58.88 Aligned_cols=226 Identities=8% Similarity=0.039 Sum_probs=117.0
Q ss_pred EEEEEEc--CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEcc---CCcEEEEEccCceEEEEecC--ccc
Q 038577 278 MVVVGFS--NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAK---LGQLLVWEWRSESYILKQQG--HYF 350 (860)
Q Consensus 278 ~l~~~~~--~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~---~g~i~v~d~~~~~~~~~~~~--~~~ 350 (860)
++++|+. ...+..||..+.+-...-..........+...++..+++++.. ...+.+||..+++....... ...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 4455554 3678899987765443222222222222233455555555532 25788999988765443221 111
Q ss_pred CeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCeeEEE--eecCCCceEEEEEeeCCCEEEEEeC---------CC
Q 038577 351 DVNCLAYSPDSQLLATGADD------NKVKVWTVSSGFCFVT--FTEHTNAVTALHFMANNHSLLSASL---------DG 413 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~~~~~d------g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~---------dg 413 (860)
....+.+ +++.++.|+.+ ..+.+||..+..-... +......- +++ .-+++.++.|+. -.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMV-EANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEE-EETTEEEEECCEESCTTTCEECC
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEE-EECCEEEEECCCCCCCCcccccc
Confidence 1222222 66777777765 4688999887653332 11111111 122 235666666653 34
Q ss_pred cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC----CeEEEEECCCCceEEE--ecCcccCeEEEEEcC
Q 038577 414 TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS----FEIFVWSMKTGRLLDI--LSGHEGPVHGLVFSP 487 (860)
Q Consensus 414 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~i~v~d~~~~~~~~~--~~~h~~~v~~l~~s~ 487 (860)
.+.+||+.+.+-...-..+....-.+++.. ++++++.|+.++ ..+.+||+.+.+-... +.........+.+
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--
Confidence 588999877643322222222221222222 566777766432 2689999987654332 2111112222333
Q ss_pred CCCEEEEEeCC-----CcEEEEEccCCc
Q 038577 488 TNATLASSSWD-----KTVRLWNVFEGK 510 (860)
Q Consensus 488 ~~~~l~s~~~d-----g~i~iwd~~~~~ 510 (860)
++++++.|+.+ ..+.+||+.+.+
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 67777777754 457778876654
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.43 E-value=0.062 Score=55.89 Aligned_cols=259 Identities=10% Similarity=0.062 Sum_probs=143.7
Q ss_pred EEEEEcCCeEEEEECCCceeEEEEeecC-------------------------cee--EEEEEe---eCCCEEEEEEccC
Q 038577 279 VVVGFSNGVFGLYQMPDFVCIHLLSISR-------------------------EKI--TTAVFN---ELGNWLVFGCAKL 328 (860)
Q Consensus 279 l~~~~~~g~i~~~~~~~~~~~~~~~~~~-------------------------~~i--~~~~~s---~~~~~l~~~~~~~ 328 (860)
+.+|+..|.++++-+++++.+..+.... +.. ..+.+. .||+++++-...+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 6688899999999999999888765322 111 233333 4789999888778
Q ss_pred CcEEEEEccCceEEEEec-CcccCeEEEEEc--CCCCEEEEEeCC-------CcEEEEECCCCeeEEEe---ecCCCce-
Q 038577 329 GQLLVWEWRSESYILKQQ-GHYFDVNCLAYS--PDSQLLATGADD-------NKVKVWTVSSGFCFVTF---TEHTNAV- 394 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~~-~~~~~v~~~~~s--~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~---~~~~~~v- 394 (860)
..+...+++..+.-..+. .....+..++|- |+..+++.+++. |.. ..++..+....+ ...+-.|
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~~f~~iD~~tm~v~ 230 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYTMYNAIDAETMEMA 230 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEEEEEEEETTTCSEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhceEEEEEcCCccEEE
Confidence 899999998877655443 345567888886 677888887752 221 110111111111 1111111
Q ss_pred ---------EEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEEC--------CCCCEEEEEecCCC
Q 038577 395 ---------TALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASD--------QSGEVICAGTLDSF 457 (860)
Q Consensus 395 ---------~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~ 457 (860)
..+...+++.+.++.+.+.. .+..+.... ....-..+.|+ .+|++-.. ++.
T Consensus 231 ~Qv~v~gnld~~~~~~~g~~af~t~yNsE-------~~~~l~em~--~~e~D~~~vfn~~~ie~~vk~G~~~~~---~g~ 298 (638)
T 3sbq_A 231 FQVIVDGNLDNTDADYTGRFAAATCYNSE-------KAFDLGGMM--RNERDWVVVFDIHAVEAAVKAGDFITL---GDS 298 (638)
T ss_dssp EEEEESSCCCCEEECSSSSEEEEEESCTT-------CCSSHHHHT--CSSCEEEEEEEHHHHHHHHHTTCCBCC---TTC
T ss_pred EEEEcCCChhhcCCCCCCCEEEEeeeccc-------cCcChhhcC--cccccEEEEecHHHHHHHHhcCCeEEE---CCC
Confidence 11222333333333332211 000000000 01111122221 13332211 100
Q ss_pred eEEEEECCC----CceEEEecCcccCeEEEEEcCCCCEEEEEeC-CCcEEEEEccCCc------------ceeEEcccCC
Q 038577 458 EIFVWSMKT----GRLLDILSGHEGPVHGLVFSPTNATLASSSW-DKTVRLWNVFEGK------------GSVESFPHTH 520 (860)
Q Consensus 458 ~i~v~d~~~----~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~-dg~i~iwd~~~~~------------~~~~~~~~~~ 520 (860)
.+.+.|.+. +..+..+-.-......+.++|||++++.++. +.++.++|+..-. .+........
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 367777765 3222222223445567899999999887664 7889999987421 1122223455
Q ss_pred CeEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q 038577 521 DVLTVVYRPDGRQLACSTLDGQIHFWDPLNG 551 (860)
Q Consensus 521 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 551 (860)
.....+|.++|.-..+---|..|.-|++...
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEeccHH
Confidence 6788999999955555568999999998653
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.43 E-value=0.12 Score=51.55 Aligned_cols=261 Identities=11% Similarity=0.089 Sum_probs=131.3
Q ss_pred CccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEE--EEee-----cCCceeEEEECCC---CCEEEEE----eCCeE
Q 038577 51 SSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVL--HRVR-----FKYPVNAILFSPN---GKYIAVG----TGKLV 116 (860)
Q Consensus 51 h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~--~~~~-----~~~~v~~~~fspd---g~~la~~----~~~~i 116 (860)
.-.....|+|.|||+++++-...|.|++++..+++.. ..+. .......|+|+|| +.+|.+. .++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456789999999997777655899999987666542 2221 2456789999996 3444332 35567
Q ss_pred EEEeCCCCC---ccc-ceeEEEEEee-ccCCCeEEEEEcCCCCeEEEeec-------------CCeEEEEeeccccc-Cc
Q 038577 117 QIWRSPGFK---KEV-FAFELIRTLA-DCNDKVTALNWSPDSNYLLVGSK-------------DLAVRLFYVKEKLK-GI 177 (860)
Q Consensus 117 ~iwd~~~~~---~~~-~~~~~~~~~~-~h~~~v~~l~~s~d~~~l~s~~~-------------dg~v~vwd~~~~~~-~~ 177 (860)
.-|....+. ... ....++..+. +....-..|+|.|||.+.++.+. .|.|.-.+.+.... ..
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 667766532 111 1122223332 11223467999999987777542 23333333332100 00
Q ss_pred cc-ccceEeecCCCcEEEEEEccCCCCCccceEEEEc--CCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEe
Q 038577 178 HT-NKPFLLLGHRDSVVGCFFSVDKKTDKVNRIYTIA--RDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGL 254 (860)
Q Consensus 178 ~~-~~~~~~~~h~~~i~~~~~~~~~~~~~~~~l~s~~--~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (860)
.. .....-.+|. ....++|.|++. |+++. .|+.-.+--+..+..--=...... .........+..|
T Consensus 190 Pf~~~~i~a~G~R-Np~Gla~dp~G~------L~~~d~g~~~~deln~i~~G~nyGwP~~~g~--~~~~~~~~P~~~~-- 258 (347)
T 3das_A 190 PFPGSPVYSYGHR-NVQGLAWDDKQR------LFASEFGQDTWDELNAIKPGDNYGWPEAEGK--GGGSGFHDPVAQW-- 258 (347)
T ss_dssp SSTTCCEEEBCCS-BCCEEEECTTCC------EEEEECCSSSCEEEEEECTTCBCCTTTCCSS--CCCTTCCCCSEEE--
T ss_pred CCCCCeEEeeCCC-CcceEEECCCCC------EEEEecCCCCCceeeEEcCCCEecCCcccCC--CCCccccCCcEec--
Confidence 00 0112233554 345788998765 44432 233222222222111000000000 0000000111111
Q ss_pred eeeccccCCCCceEEEEecCCCCEEEEEEcCCeEEEEECCCcee----EEEEeecCceeEEEEEeeCCCEEEEEEccCC
Q 038577 255 LRKDDFSQAPSKVTACDYHRGLDMVVVGFSNGVFGLYQMPDFVC----IHLLSISREKITTAVFNELGNWLVFGCAKLG 329 (860)
Q Consensus 255 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~g~i~~~~~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g 329 (860)
..+......++|. ++..+......+.|....+..... ...+......+..++..|||..+++....+|
T Consensus 259 ------~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 259 ------STDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp ------CTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred ------CCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 1122345666665 456666666666776666654332 2233334467899999999987777655443
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.39 E-value=0.15 Score=51.72 Aligned_cols=243 Identities=12% Similarity=0.041 Sum_probs=125.1
Q ss_pred CCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEeecCCCcEEEEEEccC---CCCCccceEEEEcC----
Q 038577 142 DKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLLGHRDSVVGCFFSVD---KKTDKVNRIYTIAR---- 214 (860)
Q Consensus 142 ~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~h~~~i~~~~~~~~---~~~~~~~~l~s~~~---- 214 (860)
.....|+|.|||++|+++...|.|++++.+.......................++++|+ +. .|+....
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g-----~lYv~~~~~~~ 92 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR-----RIWLSYSEVGD 92 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC-----EEEEEEEEECS
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCC-----EEEEEEeCCCC
Confidence 34689999999984555567799998875432000000001111223456789999995 33 5555432
Q ss_pred ----CccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeee-eccc-cCCCCceEEEEecCCCCEEEEEEc----
Q 038577 215 ----DCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLR-KDDF-SQAPSKVTACDYHRGLDMVVVGFS---- 284 (860)
Q Consensus 215 ----dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~---- 284 (860)
...|..++.+..... +....... .... .........++|.|+|.+.++.+.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~-------------------~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~ 153 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSK-------------------VTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQR 153 (353)
T ss_dssp SSCEEEEEEEEEECTTSSB-------------------EEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCG
T ss_pred CCCceeEEEEEEECCCCCC-------------------CCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCC
Confidence 234555655432110 01111110 0000 011122456999999955444322
Q ss_pred ---------CCeEEEEECCCc------------eeEEEEeecCceeEEEEEee-CCCEEEEEEccCCcEEEEEccCce--
Q 038577 285 ---------NGVFGLYQMPDF------------VCIHLLSISREKITTAVFNE-LGNWLVFGCAKLGQLLVWEWRSES-- 340 (860)
Q Consensus 285 ---------~g~i~~~~~~~~------------~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~~~g~i~v~d~~~~~-- 340 (860)
.|.|.-++.... .....+.........++|.| +|+..++-...++.=.+.-+..+.
T Consensus 154 ~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~ny 233 (353)
T 2g8s_A 154 PTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNY 233 (353)
T ss_dssp GGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBC
T ss_pred CccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcC
Confidence 256777776422 01222333344678899999 454444333221111222111110
Q ss_pred -----------------------------EEEEecCcccCeEEEEEcC-------CCCEEEEEeCCCcEEEEECCCCeeE
Q 038577 341 -----------------------------YILKQQGHYFDVNCLAYSP-------DSQLLATGADDNKVKVWTVSSGFCF 384 (860)
Q Consensus 341 -----------------------------~~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~dg~i~iwd~~~~~~~ 384 (860)
....+. +...+..++|.. +|.++++....+.|...++..+...
T Consensus 234 Gwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~ 312 (353)
T 2g8s_A 234 GWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT 312 (353)
T ss_dssp CTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE
T ss_pred CCCCccCCCCCCCCccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe
Confidence 011111 223466777764 4667776667788888888765443
Q ss_pred EE--e-ecCCCceEEEEEeeCCCEEEEE
Q 038577 385 VT--F-TEHTNAVTALHFMANNHSLLSA 409 (860)
Q Consensus 385 ~~--~-~~~~~~v~~i~~~~~~~~l~s~ 409 (860)
.. + ......+..+++.|||..+++.
T Consensus 313 ~~~~~~~~~~~rp~~v~~~pdG~lyv~t 340 (353)
T 2g8s_A 313 EDGRILTDRGQRIRDVRTGPDGYLYVLT 340 (353)
T ss_dssp EEEEESGGGCCCEEEEEECTTSCEEEEE
T ss_pred eeEEcccCCCCceeEEEECCCCcEEEEE
Confidence 22 2 2234578999999999765543
No 330
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.37 E-value=0.011 Score=59.46 Aligned_cols=146 Identities=16% Similarity=0.312 Sum_probs=101.3
Q ss_pred EeeCCCEEEEEeCCCcEEEEEccccceeeEeeCCC---CCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc-------
Q 038577 399 FMANNHSLLSASLDGTVRAWDLFRYRNFRTFTTPS---SRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR------- 468 (860)
Q Consensus 399 ~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~------- 468 (860)
.+.++..++.+- ++.||.-++......+.+..+. -..+..+..+|+|++||+.+.. .|.|..+..+.
T Consensus 28 ~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~--~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 28 SSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN--EIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS--EEEEEECCTTCSCCCCHH
T ss_pred EEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC--eEEEEEecCccccCcccc
Confidence 344555555553 3677877777555666777663 2256789999999999999776 68888887321
Q ss_pred -----eEEEecC------cccCeEEEEEcCC---CCEEEEEeCCCcEEEEEccCCcc-eeEEc---------ccCCCeEE
Q 038577 469 -----LLDILSG------HEGPVHGLVFSPT---NATLASSSWDKTVRLWNVFEGKG-SVESF---------PHTHDVLT 524 (860)
Q Consensus 469 -----~~~~~~~------h~~~v~~l~~s~~---~~~l~s~~~dg~i~iwd~~~~~~-~~~~~---------~~~~~v~~ 524 (860)
..+.+.- ...+|..+.|+|- +..|++-..|+.|++||+..... ...+. .....|.+
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEE
Confidence 1122221 2567999999995 56899999999999999976321 11111 12367899
Q ss_pred EEEeeCCCEEEEEe--CCCeEEEEe
Q 038577 525 VVYRPDGRQLACST--LDGQIHFWD 547 (860)
Q Consensus 525 ~~~s~~~~~l~~~~--~dg~i~iwd 547 (860)
++|.+++-.|.+.+ .+|.|+-..
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEcCCCcEEEEEecCCCCCEEEEC
Confidence 99999888777755 788887664
No 331
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.30 E-value=0.01 Score=59.37 Aligned_cols=216 Identities=13% Similarity=0.103 Sum_probs=110.5
Q ss_pred CcEEEEEccCceEEEEec--CcccCeEEEEEcCCCCEEEEEeC----C-----CcEEEEECCCCeeEEE--eecCCCceE
Q 038577 329 GQLLVWEWRSESYILKQQ--GHYFDVNCLAYSPDSQLLATGAD----D-----NKVKVWTVSSGFCFVT--FTEHTNAVT 395 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~----d-----g~i~iwd~~~~~~~~~--~~~~~~~v~ 395 (860)
..+.+||..+++....-. .....- +++.. ++..++.|+. + ..+.+||+.+.+-... +........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 468888888776543321 111111 22222 5667777665 2 4688899877643321 111111122
Q ss_pred EEEEeeCCCEEEEEeCC-----CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC----CeEEEEECCC
Q 038577 396 ALHFMANNHSLLSASLD-----GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS----FEIFVWSMKT 466 (860)
Q Consensus 396 ~i~~~~~~~~l~s~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~i~v~d~~~ 466 (860)
.+. -+++.++.||.+ ..+.+||+.+.+-...-..+....-.+++.. ++.+++.|+.++ ..+.+||+.+
T Consensus 117 ~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 117 VGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE--ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 222 256667776643 3588888876543322222222111222222 567777776542 2689999987
Q ss_pred CceEEE--ecCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCcceeEE-ccc-CCCeEEEEEeeCCCEEEEE
Q 038577 467 GRLLDI--LSGHEGPVHGLVFSPTNATLASSSWD-----KTVRLWNVFEGKGSVES-FPH-THDVLTVVYRPDGRQLACS 537 (860)
Q Consensus 467 ~~~~~~--~~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~-~~~-~~~v~~~~~s~~~~~l~~~ 537 (860)
.+-... +......-..+.+ ++++++.|+.+ ..+.+||+.+.+-.... ... ......+. -++++++.|
T Consensus 194 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~G 269 (308)
T 1zgk_A 194 NEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLG 269 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEC
T ss_pred CeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEc
Confidence 654332 1111111222233 67777777654 46899998776421111 111 11112222 267777777
Q ss_pred eCC-----CeEEEEeCCCCce
Q 038577 538 TLD-----GQIHFWDPLNGEL 553 (860)
Q Consensus 538 ~~d-----g~i~iwd~~~~~~ 553 (860)
+.+ ..+.+||+.+.+-
T Consensus 270 G~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 270 GYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp CBCSSCBCCEEEEEETTTTEE
T ss_pred CcCCCcccceEEEEcCCCCEE
Confidence 644 3588899877643
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.26 E-value=0.057 Score=53.98 Aligned_cols=197 Identities=12% Similarity=0.118 Sum_probs=99.8
Q ss_pred EEecCCCCEEEEEEc----C-------CeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEcc-------CCcE
Q 038577 270 CDYHRGLDMVVVGFS----N-------GVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAK-------LGQL 331 (860)
Q Consensus 270 ~~~~~~~~~l~~~~~----~-------g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~-------~g~i 331 (860)
.+...++..++.|+. + ..+..||..+.+-...-..........+..-++..+++++.+ ...+
T Consensus 40 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 119 (315)
T 4asc_A 40 SLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSV 119 (315)
T ss_dssp EEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCE
T ss_pred EEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceE
Confidence 334457778888874 1 237788887765433222222222222223355555665532 2468
Q ss_pred EEEEccCceEEEEec--CcccCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCeeEEE--eecCCCceEEEEEee
Q 038577 332 LVWEWRSESYILKQQ--GHYFDVNCLAYSPDSQLLATGAD------DNKVKVWTVSSGFCFVT--FTEHTNAVTALHFMA 401 (860)
Q Consensus 332 ~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~ 401 (860)
.+||..+.+...... .....-.++. -+++.++.|+. -..+.+||+.+.+-... +......-.++ .-
T Consensus 120 ~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~ 195 (315)
T 4asc_A 120 MCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT--VH 195 (315)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EE
T ss_pred EEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE--EE
Confidence 899998876543221 1111112222 35667777775 24689999887643321 11111111222 23
Q ss_pred CCCEEEEEeCCC-----cEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC-------------CeEEEEE
Q 038577 402 NNHSLLSASLDG-----TVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS-------------FEIFVWS 463 (860)
Q Consensus 402 ~~~~l~s~~~dg-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------------~~i~v~d 463 (860)
+++.++.||.++ .+.+||+.+.+=...-..+......+++. -++++++.|+.++ ..+.+||
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd 274 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYN 274 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEec
Confidence 667777887654 47888887654332222222222122222 2556666666531 1467788
Q ss_pred CCCCceEE
Q 038577 464 MKTGRLLD 471 (860)
Q Consensus 464 ~~~~~~~~ 471 (860)
+.+.+-..
T Consensus 275 ~~~~~W~~ 282 (315)
T 4asc_A 275 EEEKKWEG 282 (315)
T ss_dssp TTTTEEEE
T ss_pred CCCChhhh
Confidence 77665443
No 333
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.18 E-value=0.017 Score=57.71 Aligned_cols=230 Identities=11% Similarity=0.037 Sum_probs=116.8
Q ss_pred CCCCEEEEEEcC----CeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEc----c----CCcEEEEEccCceE
Q 038577 274 RGLDMVVVGFSN----GVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCA----K----LGQLLVWEWRSESY 341 (860)
Q Consensus 274 ~~~~~l~~~~~~----g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----~----~g~i~v~d~~~~~~ 341 (860)
-++..++.|+.+ ..+.+||..+.+-...-..............++..+++++. + ...+.+||..+.+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 345666666632 46889998776544322212212222222335565665554 1 24688899888765
Q ss_pred EEEec--CcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCeeEEE--eecCCCceEEEEEeeCCCEEEEEeCC
Q 038577 342 ILKQQ--GHYFDVNCLAYSPDSQLLATGADD-----NKVKVWTVSSGFCFVT--FTEHTNAVTALHFMANNHSLLSASLD 412 (860)
Q Consensus 342 ~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~i~~~~~~~~l~s~~~d 412 (860)
..... ........+.+ +++.++.|+.+ ..+.+||+.+.+-... +......-..+.+ +++.++.||.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCC
Confidence 43321 11111222222 56677776643 3688899877643322 1111111122222 56677777654
Q ss_pred -----CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC----CeEEEEECCCCceEEEe--cCcccCeE
Q 038577 413 -----GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS----FEIFVWSMKTGRLLDIL--SGHEGPVH 481 (860)
Q Consensus 413 -----g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~i~v~d~~~~~~~~~~--~~h~~~v~ 481 (860)
..+.+||+.+.+-...-..+......+++.. ++++++.|+.++ ..+.+||+.+.+-...- ........
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALG 257 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceE
Confidence 4588899876543222122222111222222 567777776542 26999999877544321 11111112
Q ss_pred EEEEcCCCCEEEEEeCC-----CcEEEEEccCCc
Q 038577 482 GLVFSPTNATLASSSWD-----KTVRLWNVFEGK 510 (860)
Q Consensus 482 ~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 510 (860)
.+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 258 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 258 ITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 2222 66777777654 346777776553
No 334
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.15 E-value=0.047 Score=54.61 Aligned_cols=218 Identities=9% Similarity=0.049 Sum_probs=112.4
Q ss_pred CcEEEEEccCceEEEEe-cCcccCeEEEEEcCCCCEEEEEeC-----C------CcEEEEECCCCeeEEEeecCCCce--
Q 038577 329 GQLLVWEWRSESYILKQ-QGHYFDVNCLAYSPDSQLLATGAD-----D------NKVKVWTVSSGFCFVTFTEHTNAV-- 394 (860)
Q Consensus 329 g~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~-----d------g~i~iwd~~~~~~~~~~~~~~~~v-- 394 (860)
..+..||..+++....- ..........+...++..++.|+. . ..+.+||..+++-.. +..-..+-
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CCCCCcchhc
Confidence 57889999888764321 111122333344557788888873 1 127788887765322 21111111
Q ss_pred EEEEEeeCCCEEEEEeCC--------CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEec-CC----CeEEE
Q 038577 395 TALHFMANNHSLLSASLD--------GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTL-DS----FEIFV 461 (860)
Q Consensus 395 ~~i~~~~~~~~l~s~~~d--------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~----~~i~v 461 (860)
.+++. -+++.++.||.+ ..+.+||..+.+=...-..+....-.+++. .++++++.|+. ++ ..+.+
T Consensus 92 ~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 169 (315)
T 4asc_A 92 FGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCV 169 (315)
T ss_dssp CEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEE
T ss_pred eeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEE
Confidence 11222 256666677632 358889987754222212222222122222 45667777765 21 26899
Q ss_pred EECCCCceEEEe--cCcccCeEEEEEcCCCCEEEEEeCCC-----cEEEEEccCCcceeEEc-c-cCCCeEEEEEeeCCC
Q 038577 462 WSMKTGRLLDIL--SGHEGPVHGLVFSPTNATLASSSWDK-----TVRLWNVFEGKGSVESF-P-HTHDVLTVVYRPDGR 532 (860)
Q Consensus 462 ~d~~~~~~~~~~--~~h~~~v~~l~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~-~-~~~~v~~~~~s~~~~ 532 (860)
||..+.+-...- ......-..+.+ ++++++.|+.++ .+.+||+.+.+-..... . .......+ .-+++
T Consensus 170 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~--~~~~~ 245 (315)
T 4asc_A 170 YDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV--SLVGT 245 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE--EETTE
T ss_pred EeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE--EECCE
Confidence 999876543322 111111122222 677788887654 47888887764211111 1 11111222 23677
Q ss_pred EEEEEeCCC--------------eEEEEeCCCCce
Q 038577 533 QLACSTLDG--------------QIHFWDPLNGEL 553 (860)
Q Consensus 533 ~l~~~~~dg--------------~i~iwd~~~~~~ 553 (860)
+++.|+.++ .+.+||+.+.+-
T Consensus 246 l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 246 LYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred EEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 777776532 377888877643
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.13 E-value=0.35 Score=50.75 Aligned_cols=108 Identities=16% Similarity=0.166 Sum_probs=63.7
Q ss_pred cCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEE--Eee-------cCCceeEEEECCC---CCEEEEE-e-------
Q 038577 53 SNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLH--RVR-------FKYPVNAILFSPN---GKYIAVG-T------- 112 (860)
Q Consensus 53 ~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~--~~~-------~~~~v~~~~fspd---g~~la~~-~------- 112 (860)
.....|+|.|||+++++-...+.|.+++..+++... .+. .......|+|+|| +.+|.+. .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999977765544578888866555432 222 1244669999995 5555444 2
Q ss_pred ------CCeEEEEeCCCCCcccceeE-EEEEeec-cCCCeEEEEEcCCCCeEEEee
Q 038577 113 ------GKLVQIWRSPGFKKEVFAFE-LIRTLAD-CNDKVTALNWSPDSNYLLVGS 160 (860)
Q Consensus 113 ------~~~i~iwd~~~~~~~~~~~~-~~~~~~~-h~~~v~~l~~s~d~~~l~s~~ 160 (860)
...|.-|+...........+ ++..+.. .......|+|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 23566666543321111111 2222321 123468999999998777654
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.12 E-value=0.0071 Score=54.69 Aligned_cols=144 Identities=15% Similarity=0.056 Sum_probs=81.0
Q ss_pred cCeeEEEEcCCCCEEEEEcCCCcEEEEEccc-------CeEEEEeec--CCceeEEEECCCCCEEEEEeCCeEEEEeCCC
Q 038577 53 SNICRIAVSPDGTFLLTVDENQRCHFINLHC-------HVVLHRVRF--KYPVNAILFSPNGKYIAVGTGKLVQIWRSPG 123 (860)
Q Consensus 53 ~~v~~va~spdg~~la~~~~d~~i~vwd~~~-------~~~~~~~~~--~~~v~~~~fspdg~~la~~~~~~i~iwd~~~ 123 (860)
..++.++|+|+|.+.|+ .+|.+.-.+..+ +. -..+.. -..-.++.|.|+|.+.++ .++.|+-++.++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 47889999999997776 567766666544 21 111110 011478999999999999 889998888755
Q ss_pred CCcccceeEEEEEeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEee-cCCCcEEEEEEccCCC
Q 038577 124 FKKEVFAFELIRTLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLL-GHRDSVVGCFFSVDKK 202 (860)
Q Consensus 124 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~~~~~ 202 (860)
.....-...-...-.+--..+..|.|.|+|.+-+.. |+.+.-+.........+......+. +.-.....+.|.+++.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 332110000000011112457999999999876666 7775433332221110101112222 3334455577888885
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.08 E-value=0.014 Score=59.84 Aligned_cols=237 Identities=8% Similarity=0.000 Sum_probs=114.2
Q ss_pred CCCEEEEEEccCCcEEEEEccC--ceEEEE--ec-CcccCeEEEEEcCCCCEEEEEeC-C---------CcEEEEECCCC
Q 038577 317 LGNWLVFGCAKLGQLLVWEWRS--ESYILK--QQ-GHYFDVNCLAYSPDSQLLATGAD-D---------NKVKVWTVSSG 381 (860)
Q Consensus 317 ~~~~l~~~~~~~g~i~v~d~~~--~~~~~~--~~-~~~~~v~~~~~s~~~~~l~~~~~-d---------g~i~iwd~~~~ 381 (860)
++..+++++.....+.+||..+ .+.... +. .....-.++.+ ++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 4555555555556788888864 332221 11 11111222222 5667777765 2 46889998876
Q ss_pred eeEEEeecC-CCceEEEEEeeCCCEEEEEeCC---------------------------------------CcEEEEEcc
Q 038577 382 FCFVTFTEH-TNAVTALHFMANNHSLLSASLD---------------------------------------GTVRAWDLF 421 (860)
Q Consensus 382 ~~~~~~~~~-~~~v~~i~~~~~~~~l~s~~~d---------------------------------------g~i~~wd~~ 421 (860)
+-...-... .......+...+++.++.||.+ ..+.+||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 433221111 1111111222567777888765 468889987
Q ss_pred ccceeeEeeCCCCCcE-EEEEECCCCCEEEEEecC-----CCeEEEEEC--CCCceEEE--ecCcccCeEEEEEcCCCCE
Q 038577 422 RYRNFRTFTTPSSRQF-VSLASDQSGEVICAGTLD-----SFEIFVWSM--KTGRLLDI--LSGHEGPVHGLVFSPTNAT 491 (860)
Q Consensus 422 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~-----~~~i~v~d~--~~~~~~~~--~~~h~~~v~~l~~s~~~~~ 491 (860)
+.+=...-..+..... .+++. -++++++.|+.+ ...+..||+ .+.+-... +..........+...++++
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i 255 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSL 255 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEE
T ss_pred CCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEE
Confidence 7543333222322121 22222 255666666532 126788887 44333221 1111111111122236677
Q ss_pred EEEEeCC----------------------CcEEEEEccCCccee--EEcccCCCeEEEEEeeCCCEEEEEeCCC------
Q 038577 492 LASSSWD----------------------KTVRLWNVFEGKGSV--ESFPHTHDVLTVVYRPDGRQLACSTLDG------ 541 (860)
Q Consensus 492 l~s~~~d----------------------g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg------ 541 (860)
++.|+.+ ..+.+||+.+.+-.. .......... +...++++++.|+.++
T Consensus 256 yv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~ 333 (357)
T 2uvk_A 256 IFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGV--SLPWNNSLLIIGGETAGGKAVT 333 (357)
T ss_dssp EEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSE--EEEETTEEEEEEEECGGGCEEE
T ss_pred EEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccce--eEEeCCEEEEEeeeCCCCCEee
Confidence 7777632 247789987654221 1111111122 2334788888888543
Q ss_pred eEEEEeCCCCceeEEEe
Q 038577 542 QIHFWDPLNGELMYTIE 558 (860)
Q Consensus 542 ~i~iwd~~~~~~~~~~~ 558 (860)
.+.++++++++.+....
T Consensus 334 ~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 334 DSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EEEEEEC-CCSCEEEC-
T ss_pred eEEEEEEcCcEeEeeec
Confidence 36677888887765543
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.94 E-value=0.18 Score=52.58 Aligned_cols=240 Identities=10% Similarity=0.052 Sum_probs=144.8
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeec-------------------------CCCceE--EEEEe---eCCCEEEEEe-C
Q 038577 363 LLATGADDNKVKVWTVSSGFCFVTFTE-------------------------HTNAVT--ALHFM---ANNHSLLSAS-L 411 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------------------~~~~v~--~i~~~---~~~~~l~s~~-~ 411 (860)
.+.+|+..|.|+|+-+.+++.+..+.- ..+... .+.+. .||++|+.-. .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 367888899999999999988877632 011111 22332 3677887776 4
Q ss_pred CCcEEEEEccccceeeEeeCCCCCcEEEEEEC--CCCCEEEEEecCC-------CeE-----------EEEECCCCceEE
Q 038577 412 DGTVRAWDLFRYRNFRTFTTPSSRQFVSLASD--QSGEVICAGTLDS-------FEI-----------FVWSMKTGRLLD 471 (860)
Q Consensus 412 dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~-------~~i-----------~v~d~~~~~~~~ 471 (860)
+..|...++...++-+.+..|....+..+.+. |+..++++++... ..+ ...|..+.+...
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 56788889999999999999988888888886 7888888876531 111 112222222222
Q ss_pred EecCcccCeEEEEEcCCCCEEEEEeCCC---------------cEEEEEc-------------------------cC---
Q 038577 472 ILSGHEGPVHGLVFSPTNATLASSSWDK---------------TVRLWNV-------------------------FE--- 508 (860)
Q Consensus 472 ~~~~h~~~v~~l~~s~~~~~l~s~~~dg---------------~i~iwd~-------------------------~~--- 508 (860)
.+. -.+....+...+++++.++.+... .+.++++ +.
T Consensus 232 Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~ 310 (638)
T 3sbq_A 232 QVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDG 310 (638)
T ss_dssp EEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTT
T ss_pred EEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccccc
Confidence 211 122333455577788877766431 2444544 22
Q ss_pred -CcceeEEcccCCCeEEEEEeeCCCEEEEEeC-CCeEEEEeCCCCceeEE--EecccccCCCccccccccccccCCCCcE
Q 038577 509 -GKGSVESFPHTHDVLTVVYRPDGRQLACSTL-DGQIHFWDPLNGELMYT--IEGRRDISGGRLMTDRRSAANSSSGKCF 584 (860)
Q Consensus 509 -~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i 584 (860)
+.......+-......+.++|||+++++++. +.++.++|......... +...++ .......-+...
T Consensus 311 ~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~----------~~~ae~e~GlGP 380 (638)
T 3sbq_A 311 KDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD----------VIVGEPELGLGP 380 (638)
T ss_dssp BCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG----------GEEECCBCCSCE
T ss_pred cCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc----------ceEeeccCCCcc
Confidence 1112222223334456789999999988764 67799999864211000 000000 001111224567
Q ss_pred EEEEEecCCCEEEEecCCCeEEEEECCCc
Q 038577 585 TTLCYSADGSYILAGGSSKYICMYDVADQ 613 (860)
Q Consensus 585 ~~l~~s~~g~~l~~~~~dg~v~vwd~~~~ 613 (860)
...+|.++|.-..+-.-|..|.-|++...
T Consensus 381 lHt~Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 381 LHTTFDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EEEEECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred cEEEECCCCceEeeeeecceEEEEeccHH
Confidence 99999999955556668999999999875
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.92 E-value=0.047 Score=49.41 Aligned_cols=114 Identities=11% Similarity=0.147 Sum_probs=68.6
Q ss_pred CceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcc-cceeEEEEEee--ccCCCeEEEEEcCCCCeEEEeecCCeEEEEee
Q 038577 94 YPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKE-VFAFELIRTLA--DCNDKVTALNWSPDSNYLLVGSKDLAVRLFYV 170 (860)
Q Consensus 94 ~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~-~~~~~~~~~~~--~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~ 170 (860)
..+.+++|+|+|.+.|+ .++.++-.+..+.... +.. ....+- +... -.++.|.|+|.+.++ .||.|.-++.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~--s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMG--RAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHH--HCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccc--cccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 46889999999998888 8888777776543211 000 001111 1122 478999999987777 5688887775
Q ss_pred cccccCcccccceEe-ecCCCcEEEEEEccCCCCCccceEEEEcCCccEEE
Q 038577 171 KEKLKGIHTNKPFLL-LGHRDSVVGCFFSVDKKTDKVNRIYTIARDCYMFS 220 (860)
Q Consensus 171 ~~~~~~~~~~~~~~~-~~h~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~ 220 (860)
.+.....+...-..+ .+-=..+..+.|.|+|. |+... |+.+.-
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~------Lyav~-dg~lyr 158 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY------LYAVH-GQQFYK 158 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC------EEEEE-TTEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCce------EEEEe-CCcEEe
Confidence 433111111111111 11224678999999995 66666 777544
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.90 E-value=0.37 Score=47.26 Aligned_cols=213 Identities=9% Similarity=0.011 Sum_probs=125.4
Q ss_pred cCCCCEEEEEEc--CCeEEEEECCCceeEEEEeecCceeEEEEEeeCCCEEEEEEccC-------------CcEEEEEcc
Q 038577 273 HRGLDMVVVGFS--NGVFGLYQMPDFVCIHLLSISREKITTAVFNELGNWLVFGCAKL-------------GQLLVWEWR 337 (860)
Q Consensus 273 ~~~~~~l~~~~~--~g~i~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~-------------g~i~v~d~~ 337 (860)
++++..++.... ++.|...+... .....+... .+--++++|.+|..+...+ ..|+..++.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg-~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDG-SNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTS-CSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCC-CCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 356777776653 46677777643 333333322 2356689999999987653 357777777
Q ss_pred CceEEEEecCcccCeEEEEEcCCCCEEEEEe----CCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeC-C
Q 038577 338 SESYILKQQGHYFDVNCLAYSPDSQLLATGA----DDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASL-D 412 (860)
Q Consensus 338 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~-d 412 (860)
.......... .+..++++++.|+-.. ....|...++... ....+..+.. ..++++++.|+-.+. .
T Consensus 97 g~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~ 166 (302)
T 3s25_A 97 GHGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKN 166 (302)
T ss_dssp SCCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTT
T ss_pred CCcceEeecC-----CccEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCC
Confidence 6653332221 1236777888888776 2345666666533 3344443432 346788888876654 5
Q ss_pred CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC-CeEEEEECCCCceEEEecCcccCeEEEEEcCCCCE
Q 038577 413 GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS-FEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNAT 491 (860)
Q Consensus 413 g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~ 491 (860)
..|...++......+.+. . .. ...+.|++.+|+.....+ ..|..-++..+.. ..+. ...+ ..|+|++++
T Consensus 167 ~~Iy~~~l~g~~~~~l~~--~--~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~~~~--~~~~~~g~~ 236 (302)
T 3s25_A 167 GQLYRYDTASQSEALFYD--C--NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT--EANI--EHYNVYGSL 236 (302)
T ss_dssp CCEEEEETTTTEEEEEEC--S--CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS--CSCE--EEEEEETTE
T ss_pred ceEEEEECCCCCEEEEeC--C--Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe--CCCc--ceEEECCCE
Confidence 678887776554433322 1 11 223569999988776542 4788888876553 3333 2233 347888988
Q ss_pred EEEEeC--CCcEEEEEccCCc
Q 038577 492 LASSSW--DKTVRLWNVFEGK 510 (860)
Q Consensus 492 l~s~~~--dg~i~iwd~~~~~ 510 (860)
|..++. .+.|..-++....
T Consensus 237 Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 237 IFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp EEEEECSSSCEEEEEETTSCC
T ss_pred EEEEECCCCcEEEEEECCCCc
Confidence 876643 3556666665543
No 341
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.88 E-value=0.58 Score=49.12 Aligned_cols=159 Identities=13% Similarity=0.078 Sum_probs=86.2
Q ss_pred CCCeEEEEEcCCCCeEEEeecCCeEEEEeecccccCcccccceEee------cCCCcEEEEEEccC---CCCCccceEEE
Q 038577 141 NDKVTALNWSPDSNYLLVGSKDLAVRLFYVKEKLKGIHTNKPFLLL------GHRDSVVGCFFSVD---KKTDKVNRIYT 211 (860)
Q Consensus 141 ~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~------~h~~~i~~~~~~~~---~~~~~~~~l~s 211 (860)
-...+.|+|.|||+++++-...+.|++++...+ .. .....+. ...+....++|+|+ +. .|+.
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g-~~---~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g-----~lYv 96 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESG-SV---KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNP-----YIYI 96 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC-CE---EEEEECTTCCCCTTSSCSEEEEEECTTTTTSC-----EEEE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCC-cE---eEEecCCccccccCCCCceeEEEECCCcCcCC-----EEEE
Confidence 345689999999986666543346888875443 11 1111121 13567789999996 33 4554
Q ss_pred EcC-------------CccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccCCCCceEEEEecCCCCE
Q 038577 212 IAR-------------DCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQAPSKVTACDYHRGLDM 278 (860)
Q Consensus 212 ~~~-------------dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 278 (860)
+.. ...|.-++...... .+..........-.........++|.|+|.+
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~-------------------~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~L 157 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTD-------------------TLEKPVDLLAGLPSSKDHQSGRLVIGPDQKI 157 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTT-------------------EEEEEEEEEEEECCCSSCCEEEEEECTTSCE
T ss_pred EEeccccCCCccccccccEEEEEEECCCCC-------------------CcCCcEEEEEcCCCCCCCCCCeEeECCCCeE
Confidence 432 23455555543211 0001111111001112235789999999987
Q ss_pred EEEEEc--------------------------------CCeEEEEECCCce-----------eEEEEeecCceeEEEEEe
Q 038577 279 VVVGFS--------------------------------NGVFGLYQMPDFV-----------CIHLLSISREKITTAVFN 315 (860)
Q Consensus 279 l~~~~~--------------------------------~g~i~~~~~~~~~-----------~~~~~~~~~~~i~~~~~s 315 (860)
.++.+. .|.|.-++.. +. ....+.........++|.
T Consensus 158 yv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~RNp~gla~d 236 (454)
T 1cru_A 158 YYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHRNPQGLAFT 236 (454)
T ss_dssp EEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCSEEEEEEEC
T ss_pred EEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCCCcceEEEC
Confidence 665432 2455555543 32 223333344567889999
Q ss_pred eCCCEEEEEEccC
Q 038577 316 ELGNWLVFGCAKL 328 (860)
Q Consensus 316 ~~~~~l~~~~~~~ 328 (860)
++|+..++-...+
T Consensus 237 p~G~L~~~d~g~~ 249 (454)
T 1cru_A 237 PNGKLLQSEQGPN 249 (454)
T ss_dssp TTSCEEEEEECSS
T ss_pred CCCCEEEEecCCC
Confidence 9887766655443
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.87 E-value=0.1 Score=52.22 Aligned_cols=186 Identities=11% Similarity=0.116 Sum_probs=91.1
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEE-eecCCCceEEEEEeeCCCEEEEEeC----CC-------cEEEEEccccceeeEee
Q 038577 363 LLATGADDNKVKVWTVSSGFCFVT-FTEHTNAVTALHFMANNHSLLSASL----DG-------TVRAWDLFRYRNFRTFT 430 (860)
Q Consensus 363 ~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~i~~~~~~~~l~s~~~----dg-------~i~~wd~~~~~~~~~~~ 430 (860)
.++.|+. .+..||..+++-... +..............++..++.||. ++ .+..||..+.+-...-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 3444443 488999887764431 1111122222333456777788873 12 16778876654322212
Q ss_pred CCCCCcEEEEEECCCCCEEEEEecC--C----CeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeC------C
Q 038577 431 TPSSRQFVSLASDQSGEVICAGTLD--S----FEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSW------D 498 (860)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~l~~~~~~--~----~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~------d 498 (860)
.+....-.+++.. ++.+++.|+.+ + ..+.+||..+.+-...-..........+...++++++.|+. -
T Consensus 96 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 96 LPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp BSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBC
T ss_pred CCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCcc
Confidence 2222111222222 56677777653 1 26889999876644321111111111111236777777764 2
Q ss_pred CcEEEEEccCCcceeEE-cccCCCeEEEEEeeCCCEEEEEeCC-----CeEEEEeCCCCc
Q 038577 499 KTVRLWNVFEGKGSVES-FPHTHDVLTVVYRPDGRQLACSTLD-----GQIHFWDPLNGE 552 (860)
Q Consensus 499 g~i~iwd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~ 552 (860)
..+.+||+.+.+-.... ......-.+++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 35889998776421111 111111112222 367777777643 347788887764
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.87 E-value=0.16 Score=50.83 Aligned_cols=218 Identities=13% Similarity=0.122 Sum_probs=109.6
Q ss_pred cEEEEEccCceEEEEe-cCcccCeEEEEEcCCCCEEEEEeC----CC-------cEEEEECCCCeeEEE--eecCCCceE
Q 038577 330 QLLVWEWRSESYILKQ-QGHYFDVNCLAYSPDSQLLATGAD----DN-------KVKVWTVSSGFCFVT--FTEHTNAVT 395 (860)
Q Consensus 330 ~i~v~d~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~--~~~~~~~v~ 395 (860)
.+..||..+++..... ..............++..++.|+. ++ .+.+||..+.+-... +...... .
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-F 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-C
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-c
Confidence 4788888887754421 111112223334557788888873 12 177888876643321 1111111 1
Q ss_pred EEEEeeCCCEEEEEeCC-------CcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCC-----CeEEEEE
Q 038577 396 ALHFMANNHSLLSASLD-------GTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDS-----FEIFVWS 463 (860)
Q Consensus 396 ~i~~~~~~~~l~s~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~v~d 463 (860)
+++. -+++.++.||.+ ..+.+||..+.+-...-..+....-.+++. .++++++.|+.+. ..+.+||
T Consensus 104 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 104 GLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEc
Confidence 2222 256677777754 247788887654332222222211122222 4666777766421 2699999
Q ss_pred CCCCceEEEe--cCcccCeEEEEEcCCCCEEEEEeCC-----CcEEEEEccCCcceeEE-cc-cCCCeEEEEEeeCCCEE
Q 038577 464 MKTGRLLDIL--SGHEGPVHGLVFSPTNATLASSSWD-----KTVRLWNVFEGKGSVES-FP-HTHDVLTVVYRPDGRQL 534 (860)
Q Consensus 464 ~~~~~~~~~~--~~h~~~v~~l~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l 534 (860)
..+.+-...- ......-..+.+ ++++++.|+.+ ..+.+||+.+.+-.... .. ...... + ..-+++++
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~-~~~~~~i~ 257 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSIS-L-VSLAGSLY 257 (318)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCE-E-EEETTEEE
T ss_pred CCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceE-E-EEECCEEE
Confidence 9887644332 111111122222 67777777654 34678888776421111 11 111112 2 22367777
Q ss_pred EEEeCC--------------CeEEEEeCCCCcee
Q 038577 535 ACSTLD--------------GQIHFWDPLNGELM 554 (860)
Q Consensus 535 ~~~~~d--------------g~i~iwd~~~~~~~ 554 (860)
+.|+.+ ..+.+||+.+.+-.
T Consensus 258 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp EECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred EECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 777653 34788888776543
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.79 E-value=0.0075 Score=59.86 Aligned_cols=190 Identities=11% Similarity=0.100 Sum_probs=106.1
Q ss_pred CEEEEEeCCCcEEEEECCCCeeEEEeecC-CCceEEEEEe--eCCCEEEEE--eCCCcEEEEEccccceeeEeeCCCC--
Q 038577 362 QLLATGADDNKVKVWTVSSGFCFVTFTEH-TNAVTALHFM--ANNHSLLSA--SLDGTVRAWDLFRYRNFRTFTTPSS-- 434 (860)
Q Consensus 362 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~i~~~--~~~~~l~s~--~~dg~i~~wd~~~~~~~~~~~~~~~-- 434 (860)
..+++++.||.|.-+|..+|+....+... ..++....-. +.+..++.+ ..||.+..++..++.....+..+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999999888654 1222221100 112234433 5899999999887755444433211
Q ss_pred -CcEEE---EEE-C----CCCCEEEEEecCCCeEEEEECCCCceEEEecCcc--cC-----eEEEEEc-----CCCCEEE
Q 038577 435 -RQFVS---LAS-D----QSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHE--GP-----VHGLVFS-----PTNATLA 493 (860)
Q Consensus 435 -~~~~~---~~~-~----~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~--~~-----v~~l~~s-----~~~~~l~ 493 (860)
.++.. ..+ . ..+..+++++.++ .++..|+.+|+.+..+.... +. ..|.... ..+..++
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g-~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRT-IMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEE-EEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCC-EEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 11111 001 0 1456778888888 99999999999999886321 11 1111110 1234566
Q ss_pred EEeCCCcEEEEEccCCcceeEEc-----ccCCC--e-EEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeE
Q 038577 494 SSSWDKTVRLWNVFEGKGSVESF-----PHTHD--V-LTVVYRPDGRQLACSTLDGQIHFWDPLNGELMY 555 (860)
Q Consensus 494 s~~~dg~i~iwd~~~~~~~~~~~-----~~~~~--v-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~ 555 (860)
.+..+..+.+.+ .+++ ..... ..... + ..-..+.|+.+ +.++.||.|.-+|..+|+.+.
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 666666666655 3332 11100 00000 0 00001224565 457889999999999998876
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.38 E-value=0.13 Score=52.40 Aligned_cols=234 Identities=13% Similarity=0.040 Sum_probs=111.7
Q ss_pred CCCEEEEEEcC-CeEEEEECCC--ceeEEEEeec-CceeEEEEEeeCCCEEEEEEc-c--------CCcEEEEEccCceE
Q 038577 275 GLDMVVVGFSN-GVFGLYQMPD--FVCIHLLSIS-REKITTAVFNELGNWLVFGCA-K--------LGQLLVWEWRSESY 341 (860)
Q Consensus 275 ~~~~l~~~~~~-g~i~~~~~~~--~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~-~--------~g~i~v~d~~~~~~ 341 (860)
++.+++.|+.+ ..+..||... .+-...-... .......+..-++..+++++. + ...+.+||..+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 55666666543 5788899863 2222111111 112222222335666666654 1 24688999988765
Q ss_pred EEEecCc-ccCeEEEEEcCCCCEEEEEeCC---------------------------------------CcEEEEECCCC
Q 038577 342 ILKQQGH-YFDVNCLAYSPDSQLLATGADD---------------------------------------NKVKVWTVSSG 381 (860)
Q Consensus 342 ~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d---------------------------------------g~i~iwd~~~~ 381 (860)
....... .......+...++++++.|+.+ ..+.+||+.+.
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~ 178 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ 178 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC
Confidence 4432211 1111111122467788888754 47899998876
Q ss_pred eeEE--EeecCCCceEEEEEeeCCCEEEEEeC------CCcEEEEEc--cccc--eeeEeeCCCCCcEEEEEECCCCCEE
Q 038577 382 FCFV--TFTEHTNAVTALHFMANNHSLLSASL------DGTVRAWDL--FRYR--NFRTFTTPSSRQFVSLASDQSGEVI 449 (860)
Q Consensus 382 ~~~~--~~~~~~~~v~~i~~~~~~~~l~s~~~------dg~i~~wd~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l 449 (860)
+-.. .+......-.+++. -+++.++.||. ...+..||+ .+.+ .+..+..+.. .....+...+++++
T Consensus 179 ~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~iy 256 (357)
T 2uvk_A 179 QWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG-VAGGFAGISNDSLI 256 (357)
T ss_dssp EEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC-CBSCEEEEETTEEE
T ss_pred cEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc-cccceEEEECCEEE
Confidence 4332 22211111022332 25566666654 235777876 3322 1111111111 11111223356666
Q ss_pred EEEecCC---------------------CeEEEEECCCCceEE--EecCcccCeEEEEEcCCCCEEEEEeCCC------c
Q 038577 450 CAGTLDS---------------------FEIFVWSMKTGRLLD--ILSGHEGPVHGLVFSPTNATLASSSWDK------T 500 (860)
Q Consensus 450 ~~~~~~~---------------------~~i~v~d~~~~~~~~--~~~~h~~~v~~l~~s~~~~~l~s~~~dg------~ 500 (860)
+.|+.+. ..+.+||+.+.+-.. .+......-.+ ...++++++.|+.++ .
T Consensus 257 v~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~ 334 (357)
T 2uvk_A 257 FAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGGETAGGKAVTD 334 (357)
T ss_dssp EECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEEECGGGCEEEE
T ss_pred EEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEeeeCCCCCEeee
Confidence 7766321 157899988765433 33222222222 233778888888653 3
Q ss_pred EEEEEccCCcce
Q 038577 501 VRLWNVFEGKGS 512 (860)
Q Consensus 501 i~iwd~~~~~~~ 512 (860)
|.++++++++..
T Consensus 335 v~~l~~~~~~~~ 346 (357)
T 2uvk_A 335 SVLITVKDNKVT 346 (357)
T ss_dssp EEEEEC-CCSCE
T ss_pred EEEEEEcCcEeE
Confidence 556687777643
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.12 Score=51.31 Aligned_cols=191 Identities=7% Similarity=-0.064 Sum_probs=105.4
Q ss_pred CEEEEEEcCCeEEEEECCCceeEEEEeecC-ceeEEEEE--eeCCCEEEEEE-ccCCcEEEEEccCceEEEEecC----c
Q 038577 277 DMVVVGFSNGVFGLYQMPDFVCIHLLSISR-EKITTAVF--NELGNWLVFGC-AKLGQLLVWEWRSESYILKQQG----H 348 (860)
Q Consensus 277 ~~l~~~~~~g~i~~~~~~~~~~~~~~~~~~-~~i~~~~~--s~~~~~l~~~~-~~~g~i~v~d~~~~~~~~~~~~----~ 348 (860)
..+++++.||.|.-+|..+|+....+.... .++....- .+.+..+++.. ..+|.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478999999999999999999998887651 12211100 01122444443 4569999999988866554421 1
Q ss_pred ccCeEE---EEE-----cCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCC--c-----eEEEEEe-----eCCCEEEE
Q 038577 349 YFDVNC---LAY-----SPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTN--A-----VTALHFM-----ANNHSLLS 408 (860)
Q Consensus 349 ~~~v~~---~~~-----s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~-----v~~i~~~-----~~~~~l~s 408 (860)
..++.. ..+ +..+..+++|+.+|.+...|+.+|+.+..+..... . ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 112221 000 01355788999999999999999999998864321 0 0111110 11345666
Q ss_pred EeCCCcEEEEEccccceeeEee-----CCCCC-cE-EEEEECCCCCEEEEEecCCCeEEEEECCCCceEE
Q 038577 409 ASLDGTVRAWDLFRYRNFRTFT-----TPSSR-QF-VSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLD 471 (860)
Q Consensus 409 ~~~dg~i~~wd~~~~~~~~~~~-----~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~ 471 (860)
+..+..+.+.+ ++++ ...+. ..... .+ .....+.++.+ +++..++ .|+-+|..+|+.+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg-~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDK-SLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTT-EEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCC-EEEEEECCCCcEEE
Confidence 66666666555 3332 11111 00000 00 00001224555 3466666 88888888888765
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.72 E-value=0.47 Score=53.15 Aligned_cols=196 Identities=13% Similarity=0.139 Sum_probs=106.4
Q ss_pred CCCCEEEEEeCC----CcEEEEECCCCeeEEEe-e------cCCCceEEEEEee-CCCEEEEEeCCC------cEEEEEc
Q 038577 359 PDSQLLATGADD----NKVKVWTVSSGFCFVTF-T------EHTNAVTALHFMA-NNHSLLSASLDG------TVRAWDL 420 (860)
Q Consensus 359 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~------~~~~~v~~i~~~~-~~~~l~s~~~dg------~i~~wd~ 420 (860)
.++..++.|+.+ ..+.+||..++.-...- . .....-.+++..+ +++.++.||.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777743 46888998776533322 1 1111112333333 677777777543 4788888
Q ss_pred cccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCC-eEEEEECCCCceEEEec-----CcccCeEEEEEcCC-CCEEE
Q 038577 421 FRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSF-EIFVWSMKTGRLLDILS-----GHEGPVHGLVFSPT-NATLA 493 (860)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~i~v~d~~~~~~~~~~~-----~h~~~v~~l~~s~~-~~~l~ 493 (860)
.+.+-...-..+....-.+++.-.++.+++.|+.++. .+.+||..+.+-...-. .....-..+.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 7743222222222222233444347888888876543 58999998876443221 11112233555555 66777
Q ss_pred EEeC--C-----CcEEEEEccCCcc-----eeEEc---ccCCCeEEEEEeeCCCEEEEEeCC--------CeEEEEeCCC
Q 038577 494 SSSW--D-----KTVRLWNVFEGKG-----SVESF---PHTHDVLTVVYRPDGRQLACSTLD--------GQIHFWDPLN 550 (860)
Q Consensus 494 s~~~--d-----g~i~iwd~~~~~~-----~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d--------g~i~iwd~~~ 550 (860)
.|+. + ..+.+||+.+..- -.... .....-.+++...++++++.|+.+ ..+.+||+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 7765 2 3588999887751 01111 111111223333347777777742 4589999987
Q ss_pred Ccee
Q 038577 551 GELM 554 (860)
Q Consensus 551 ~~~~ 554 (860)
.+-.
T Consensus 636 ~~W~ 639 (695)
T 2zwa_A 636 ETLT 639 (695)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7543
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.35 E-value=2 Score=48.06 Aligned_cols=199 Identities=14% Similarity=0.121 Sum_probs=105.8
Q ss_pred eCCCEEEEEeCC----CcEEEEEccccceeeEe-e-----CCCCCcEEEEEECC-CCCEEEEEecCC-----CeEEEEEC
Q 038577 401 ANNHSLLSASLD----GTVRAWDLFRYRNFRTF-T-----TPSSRQFVSLASDQ-SGEVICAGTLDS-----FEIFVWSM 464 (860)
Q Consensus 401 ~~~~~l~s~~~d----g~i~~wd~~~~~~~~~~-~-----~~~~~~~~~~~~~~-~~~~l~~~~~~~-----~~i~v~d~ 464 (860)
.++..++.||.+ ..+.+||..+.+-...- . .+......+++..+ ++.+++.|+.++ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 455666666643 35788888766433322 1 12222223333333 777777877543 26889999
Q ss_pred CCCceEEEecCcccCe-EEEEEcCCCCEEEEEeCCC--cEEEEEccCCcceeEE-----cccCCCeEEEEEeeC-CCEEE
Q 038577 465 KTGRLLDILSGHEGPV-HGLVFSPTNATLASSSWDK--TVRLWNVFEGKGSVES-----FPHTHDVLTVVYRPD-GRQLA 535 (860)
Q Consensus 465 ~~~~~~~~~~~h~~~v-~~l~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~~-~~~l~ 535 (860)
.+.+....-....... .+.+...++++++.|+.++ .+.+||..+..-.... ........++.+..+ +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 8865433211111111 1233324788888887654 6899998776421111 111222233555555 66777
Q ss_pred EEeC--C-----CeEEEEeCCCCce-----eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCC-
Q 038577 536 CSTL--D-----GQIHFWDPLNGEL-----MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSS- 602 (860)
Q Consensus 536 ~~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~d- 602 (860)
.|+. + ..+.+||+.+.+- -..+...... ...-.+++...+++.++.||.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~-----------------~R~~~~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF-----------------QRYGSQIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG-----------------CCBSCEEEEEETTEEEEECCBCS
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC-----------------CcccceEEEeCCCEEEEECCccC
Confidence 7765 2 3588999887761 1111110000 0001223333447778878743
Q ss_pred -------CeEEEEECCCceEE
Q 038577 603 -------KYICMYDVADQVLL 616 (860)
Q Consensus 603 -------g~v~vwd~~~~~~~ 616 (860)
..|.+||+.+.+..
T Consensus 619 ~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp SCCCCTTTSEEEEETTTTEEE
T ss_pred CCCCCCCCeEEEEECCCCeEE
Confidence 45889998887643
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.80 E-value=3.1 Score=40.18 Aligned_cols=207 Identities=16% Similarity=0.118 Sum_probs=105.6
Q ss_pred CCcEEEEEccCceEEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEE
Q 038577 328 LGQLLVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLL 407 (860)
Q Consensus 328 ~g~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~ 407 (860)
+|.++.|-......+.........|..++..... .++. . ||.|+.|-....-.+.....-...|..++...+ ..+
T Consensus 41 ~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~ 115 (282)
T 3qhy_B 41 GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASY 115 (282)
T ss_dssp TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEE
T ss_pred CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEE
Confidence 3666666543321111111123357777765443 3333 4 899999976542221111112346777766543 344
Q ss_pred EEeCCCcEEEEEccccceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcC
Q 038577 408 SASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSP 487 (860)
Q Consensus 408 s~~~dg~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~ 487 (860)
.-. ||.+..|-........ .+......+..++..... .++-. ++ .++.|-......+..-..-...|..++...
T Consensus 116 al~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~--~~~l~-~G-~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~ 189 (282)
T 3qhy_B 116 ALK-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYT--ALAVK-NG-GVIAWGDNYFGQTTVPAEAQSGVDDVAGGI 189 (282)
T ss_dssp EEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSE--EEEEE-TT-EEEEEECCTTSTTSCCGGGGSSEEEEEECS
T ss_pred EEe-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCE--EEEEE-CC-EEEEecCCCCCCCCCceecCCCeEEEEecC
Confidence 445 8999999865432221 111122345555544332 22223 55 888887653211111111235677777654
Q ss_pred CCCEEEEEeCCCcEEEEEccCCcceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q 038577 488 TNATLASSSWDKTVRLWNVFEGKGSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNG 551 (860)
Q Consensus 488 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 551 (860)
+.. ++. .||.|+.|-......+.........|..++..... .++.. ||.|+.|-.+..
T Consensus 190 ~hs-~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 190 FHS-LAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp SEE-EEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEEEEESTTCC
T ss_pred CEE-EEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEEEEecCCCC
Confidence 332 333 49999999865543332222333457777655433 33333 999999976654
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.43 E-value=2.1 Score=41.36 Aligned_cols=184 Identities=17% Similarity=0.084 Sum_probs=95.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccceeeEee
Q 038577 351 DVNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNFRTFT 430 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~~~~~ 430 (860)
.|..++..... .++. . ||.|+.|-....-.+.........|..++..... .++. . ||.+..|-.......-. +
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~-P 97 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTV-P 97 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCC-C
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCC-C
Confidence 56677665432 2333 4 8999999765422211111123356666654332 3333 4 89999998654322111 1
Q ss_pred CCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCc
Q 038577 431 TPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGK 510 (860)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~ 510 (860)
......+..++.... ..++-. ++ .++.|-....-.+..-......|..++...+. .+.-. ||.|+.|-.....
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G-~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DG-KVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TT-EEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTS
T ss_pred cccCCCeEEEECcCC--EEEEEe-CC-eEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCC
Confidence 111234555555433 333333 55 88888765421111111124567777664333 22234 7999999765533
Q ss_pred ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCC
Q 038577 511 GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNG 551 (860)
Q Consensus 511 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~ 551 (860)
.+.........|..++...+. .++. .||.|+.|-....
T Consensus 171 qlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 171 QTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp TTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTT
T ss_pred CCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCC
Confidence 332222334567777665432 3333 5999999976544
No 351
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=92.78 E-value=14 Score=40.96 Aligned_cols=235 Identities=9% Similarity=0.021 Sum_probs=124.8
Q ss_pred EEE-EcCCCCEEEEEeC-----CCcEEEEECCCCeeEE-Eee-cCCC------ceEEEEEeeCCCEEEEE----------
Q 038577 354 CLA-YSPDSQLLATGAD-----DNKVKVWTVSSGFCFV-TFT-EHTN------AVTALHFMANNHSLLSA---------- 409 (860)
Q Consensus 354 ~~~-~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~-~~~-~~~~------~v~~i~~~~~~~~l~s~---------- 409 (860)
.+. ++|++++++.+-+ -..++++|+.+++.+. .+. .-+. ....++|..+...+++.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 344 7888887766433 2369999999987663 111 0000 11344787444444432
Q ss_pred eCCCcEEEEEccccc--eeeEeeCCCCCcEEEEEECCCCCE----EEEE-e--cCCCeEEEEECCC--CceEEEecCccc
Q 038577 410 SLDGTVRAWDLFRYR--NFRTFTTPSSRQFVSLASDQSGEV----ICAG-T--LDSFEIFVWSMKT--GRLLDILSGHEG 478 (860)
Q Consensus 410 ~~dg~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----l~~~-~--~~~~~i~v~d~~~--~~~~~~~~~h~~ 478 (860)
+....++.|.+-+.. ....+..+..........++++++ +++. + .....+++.+... ++...... ...
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 291 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINM-PSD 291 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCS-CTT
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeec-CCc
Confidence 112468888876643 233344444434456667777773 3333 2 2223677777653 43232222 221
Q ss_pred CeEEEEEcCCCCEEEEE----------eCCCcEEEEEccCCc-------ceeEEcc--cCCCeEEEEEeeCCCEEEEEeC
Q 038577 479 PVHGLVFSPTNATLASS----------SWDKTVRLWNVFEGK-------GSVESFP--HTHDVLTVVYRPDGRQLACSTL 539 (860)
Q Consensus 479 ~v~~l~~s~~~~~l~s~----------~~dg~i~iwd~~~~~-------~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~ 539 (860)
..+..++++.+++.. ...+.|...|+.+.. ....+.. ....+..+.+..+ .++++...
T Consensus 292 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~ 368 (711)
T 4hvt_A 292 --ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYD 368 (711)
T ss_dssp --CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEE
T ss_pred --ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEE
Confidence 112334456555532 246779999987642 1222232 3445778888865 57777777
Q ss_pred CCe--EEEEeCCCCc-eeEE-EecccccCCCccccccccccccCCCCcEEEEEEecCCCEE-EEecC---CCeEEEEECC
Q 038577 540 DGQ--IHFWDPLNGE-LMYT-IEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYI-LAGGS---SKYICMYDVA 611 (860)
Q Consensus 540 dg~--i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l-~~~~~---dg~v~vwd~~ 611 (860)
++. +.++++.+++ .... +.... ...+....+++++..+ ++.+. -+.+..+|+.
T Consensus 369 ~~~~~l~~~~~~~g~~~~~~~i~lp~-------------------~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 369 NVVAKVVTFTLENEQWTKPVVLKLPY-------------------QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTEEEEEEECEETTEECCCEEECCCS-------------------TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCEEEEEEEECCCCceEEEeccCCCC-------------------CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 775 6777776664 1222 21111 0125666667776543 33332 3678888876
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.87 E-value=21 Score=37.25 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=61.2
Q ss_pred ceeEEEEEeeCCC-EEEEEEccCCcEEEEEccCce---EEEEec---------CcccCeEEEEEcCC----CCEEEEEeC
Q 038577 307 EKITTAVFNELGN-WLVFGCAKLGQLLVWEWRSES---YILKQQ---------GHYFDVNCLAYSPD----SQLLATGAD 369 (860)
Q Consensus 307 ~~i~~~~~s~~~~-~l~~~~~~~g~i~v~d~~~~~---~~~~~~---------~~~~~v~~~~~s~~----~~~l~~~~~ 369 (860)
.....++|.|+|. .++++... |.|++++..... .+..+. ........|+++|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4667899999996 45555444 999999754321 122221 11346788999996 444343322
Q ss_pred --C----------CcEEEEECCC----------CeeEEEee--cCCCceEEEEEeeCCCEEEEEeCCC
Q 038577 370 --D----------NKVKVWTVSS----------GFCFVTFT--EHTNAVTALHFMANNHSLLSASLDG 413 (860)
Q Consensus 370 --d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~i~~~~~~~~l~s~~~dg 413 (860)
+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++.+..+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1344465532 12333332 1223467899999998877776543
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.85 E-value=25 Score=36.70 Aligned_cols=105 Identities=15% Similarity=0.046 Sum_probs=60.3
Q ss_pred cCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCe---eEEEee---------cCCCceEEEEEeeC----CCEEEEEeC-
Q 038577 350 FDVNCLAYSPDSQ-LLATGADDNKVKVWTVSSGF---CFVTFT---------EHTNAVTALHFMAN----NHSLLSASL- 411 (860)
Q Consensus 350 ~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~---------~~~~~v~~i~~~~~----~~~l~s~~~- 411 (860)
...+.|+|.|+|. .++++...|.|++++..... .+..+. ........|+++|+ +...++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3467899999996 45566778999999754221 122221 01356789999986 433343332
Q ss_pred -C----------CcEEEEEcccc----------ceeeEee-CCCCCcEEEEEECCCCCEEEEEec
Q 038577 412 -D----------GTVRAWDLFRY----------RNFRTFT-TPSSRQFVSLASDQSGEVICAGTL 454 (860)
Q Consensus 412 -d----------g~i~~wd~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~ 454 (860)
+ ..|.-|.+... +.+..+. .........++|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444555321 1222222 223345678999999986666544
No 354
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=88.37 E-value=18 Score=34.56 Aligned_cols=184 Identities=15% Similarity=0.088 Sum_probs=106.0
Q ss_pred CCEEEEEeCCCcEEEEE---CCCCeeEEEeecCCCceEEEEEee--CCCEEEEEeCCCcEEEEEccccc----eeeEeeC
Q 038577 361 SQLLATGADDNKVKVWT---VSSGFCFVTFTEHTNAVTALHFMA--NNHSLLSASLDGTVRAWDLFRYR----NFRTFTT 431 (860)
Q Consensus 361 ~~~l~~~~~dg~i~iwd---~~~~~~~~~~~~~~~~v~~i~~~~--~~~~l~s~~~dg~i~~wd~~~~~----~~~~~~~ 431 (860)
...++.-+..|.++--. +..+.....+ .....|..+.. + +...++..+.+|.++...+.... ....+..
T Consensus 35 ~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~l 112 (276)
T 3no0_A 35 TEGLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKL 112 (276)
T ss_dssp TSCEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCC
T ss_pred CCEEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEec
Confidence 33455555566655432 2222111013 23456666644 4 46789999999999999876643 2223333
Q ss_pred CCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC---------ceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEE
Q 038577 432 PSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG---------RLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVR 502 (860)
Q Consensus 432 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~---------~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~ 502 (860)
.....+..+........++..+..| .++.++...- ...-.+. ....|.++...+++..++..+..|.++
T Consensus 113 kegD~l~~~~~~~~~~~ill~T~~G-~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~k 190 (276)
T 3no0_A 113 TEGDEVVSIASSVDETHILLFTKKG-RVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVK 190 (276)
T ss_dssp CTTCCEEEEEECCSSCEEEEEETTS-EEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEE
T ss_pred CCCCEEEEEEEeCCCCEEEEEECCC-EEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEE
Confidence 3445666666666667788888887 7777765321 1111122 235566666666677889999999999
Q ss_pred EEEccCCc-------ceeEEcccCCCeEEEEEeeCCCEEEEEeCCCeEEE--EeCC
Q 038577 503 LWNVFEGK-------GSVESFPHTHDVLTVVYRPDGRQLACSTLDGQIHF--WDPL 549 (860)
Q Consensus 503 iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i--wd~~ 549 (860)
...+..-. ..... ...+.+..+....+...++..+.+|.+.. ++..
T Consensus 191 r~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 191 KISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred EeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 98874322 11222 33444555444334445666677777666 6653
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.32 E-value=22 Score=35.61 Aligned_cols=136 Identities=13% Similarity=0.217 Sum_probs=87.6
Q ss_pred cEEEEEcccc--ceeeEeeCCC-----CCcEEEEEEC---CC----CCEEEEEecCCCeEEEEECCCCceEEEecC----
Q 038577 414 TVRAWDLFRY--RNFRTFTTPS-----SRQFVSLASD---QS----GEVICAGTLDSFEIFVWSMKTGRLLDILSG---- 475 (860)
Q Consensus 414 ~i~~wd~~~~--~~~~~~~~~~-----~~~~~~~~~~---~~----~~~l~~~~~~~~~i~v~d~~~~~~~~~~~~---- 475 (860)
+|.+||+.+. +.++.+..+. ...+..++++ |. +.++.++...+..|.+||+.+++.-+.+..
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777888888 7777776542 3457777777 22 456667766566899999999876655521
Q ss_pred ----------c----ccCeEEEEEcCC----CCEEEEEeCCCcEEEEEccC-----Cc--ceeEEcccC---CCeEEEEE
Q 038577 476 ----------H----EGPVHGLVFSPT----NATLASSSWDKTVRLWNVFE-----GK--GSVESFPHT---HDVLTVVY 527 (860)
Q Consensus 476 ----------h----~~~v~~l~~s~~----~~~l~s~~~dg~i~iwd~~~-----~~--~~~~~~~~~---~~v~~~~~ 527 (860)
. ...+..|+++|+ ++.|......+ -++|.+.+ .. ...+..+.. ..-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 136888999998 77777666554 24444432 11 112222222 34455677
Q ss_pred e-eCCCEEEEEeCCCeEEEEeCCC
Q 038577 528 R-PDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 528 s-~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
. .+|.++++--....|..|+..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCC
Confidence 5 5777777777788899999875
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=87.00 E-value=42 Score=37.28 Aligned_cols=235 Identities=9% Similarity=0.054 Sum_probs=123.7
Q ss_pred EEE-EeeCCCEEEEEEccCC----cEEEEEccCceEEEEecCccc--------CeEEEEEcCCCCEEEEEe---------
Q 038577 311 TAV-FNELGNWLVFGCAKLG----QLLVWEWRSESYILKQQGHYF--------DVNCLAYSPDSQLLATGA--------- 368 (860)
Q Consensus 311 ~~~-~s~~~~~l~~~~~~~g----~i~v~d~~~~~~~~~~~~~~~--------~v~~~~~s~~~~~l~~~~--------- 368 (860)
.+. ++|+++.++++-+..| .++++|+.+++.+..--.... ....++|..+...+++..
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 344 7889998888776544 699999999887631100000 013447764443333211
Q ss_pred -CCCcEEEEECCCCe--eEEEeecCCCce-EEEEEeeCCCE-----EEEEeCC---CcEEEEEcccc-ceeeEeeCCCCC
Q 038577 369 -DDNKVKVWTVSSGF--CFVTFTEHTNAV-TALHFMANNHS-----LLSASLD---GTVRAWDLFRY-RNFRTFTTPSSR 435 (860)
Q Consensus 369 -~dg~i~iwd~~~~~--~~~~~~~~~~~v-~~i~~~~~~~~-----l~s~~~d---g~i~~wd~~~~-~~~~~~~~~~~~ 435 (860)
....|+.|.+.+.. -...+.+....+ .+...++++++ +++.+.+ ..+.+.+.... .....+..+...
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 292 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA 292 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc
Confidence 12468888876542 223333333332 33445566652 4444423 23455554431 123344444432
Q ss_pred cEEEEEECCCCCEEEEEec---------CCCeEEEEECCCCc-------eEEE-ec-CcccCeEEEEEcCCCCEEEEEeC
Q 038577 436 QFVSLASDQSGEVICAGTL---------DSFEIFVWSMKTGR-------LLDI-LS-GHEGPVHGLVFSPTNATLASSSW 497 (860)
Q Consensus 436 ~~~~~~~~~~~~~l~~~~~---------~~~~i~v~d~~~~~-------~~~~-~~-~h~~~v~~l~~s~~~~~l~s~~~ 497 (860)
. +....++.+++.... ..+.|...|+.++. .... +. .....+..+.+..+ .++++...
T Consensus 293 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~ 368 (711)
T 4hvt_A 293 T---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYD 368 (711)
T ss_dssp E---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEE
T ss_pred e---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEE
Confidence 2 223345555543311 23479999987642 2222 32 23446778888865 57777777
Q ss_pred CCc--EEEEEccCCc-ceeE-E-cccCCCeEEEEEeeCCCEE-EEEeC---CCeEEEEeCC
Q 038577 498 DKT--VRLWNVFEGK-GSVE-S-FPHTHDVLTVVYRPDGRQL-ACSTL---DGQIHFWDPL 549 (860)
Q Consensus 498 dg~--i~iwd~~~~~-~~~~-~-~~~~~~v~~~~~s~~~~~l-~~~~~---dg~i~iwd~~ 549 (860)
++. +.++|+.++. .... + .+..+.+.....++++..+ ++.+. -+.+..+|+.
T Consensus 369 ~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 369 NVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 764 6677766653 1222 1 2223456666777776544 44332 3568888886
No 357
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=86.66 E-value=2.2 Score=35.58 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=62.0
Q ss_pred HHHHHhhcCcCCcHHHHHHHHhc-----CC-------hHHHHHHhHhcCCCccchhcccCCHHHHHHHHHHHHhhhccCC
Q 038577 727 PEAVDAALNEDQPKRALILSLRL-----NE-------DNLIKKCIFAISPVDIPAVASSIPYRYMQRLIEALSDLLESCP 794 (860)
Q Consensus 727 ~~~~~~~~~~~~~~~~l~~~~~~-----~~-------~~~~~~~l~~~~~~~i~~~~~~l~~~~~~~ll~~l~~~l~~~~ 794 (860)
..+++..+..+....+|..+|.. ++ ...++++|.+++.++|+.++..|+.++...|++||=+-++...
T Consensus 39 ~~qv~~lL~~g~~~~ALk~~L~~pP~~~k~q~~K~~~~~~Vl~VL~siK~sdI~~~v~~L~~e~~D~LMKYiYkGm~~~~ 118 (151)
T 1k8k_G 39 EGEVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDKNGVDLLMKYIYKGFESPS 118 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTSSCCSSCSCHHHHHHHHHHHHHHHHHSCGGGHHHHHHTSCHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHHHHHccHHHHHHHHHHhChhhhhHHHHHHHHhhcCcC
Confidence 55666677777888888877754 22 2458899999999999999999999999999999999998765
Q ss_pred ChhhHHHHHHHHHHHHhh
Q 038577 795 HLEFMLRWCQELCKTHGN 812 (860)
Q Consensus 795 ~~~~~~~~l~~~l~~H~~ 812 (860)
+-. ...||..|--
T Consensus 119 ~~~-----~~~LL~WHEK 131 (151)
T 1k8k_G 119 DNS-----SAVLLQWHEK 131 (151)
T ss_dssp TTH-----HHHHHHHHHH
T ss_pred CCc-----chHHHHHHHH
Confidence 443 2345555533
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=86.45 E-value=30 Score=35.13 Aligned_cols=261 Identities=9% Similarity=0.015 Sum_probs=121.8
Q ss_pred CEEEEEEcCCeEEEEECCC-ceeEEEE--eecCceeEEEEEee-CCCEEEEEEccCC----cEEEEEccCceEEEEec--
Q 038577 277 DMVVVGFSNGVFGLYQMPD-FVCIHLL--SISREKITTAVFNE-LGNWLVFGCAKLG----QLLVWEWRSESYILKQQ-- 346 (860)
Q Consensus 277 ~~l~~~~~~g~i~~~~~~~-~~~~~~~--~~~~~~i~~~~~s~-~~~~l~~~~~~~g----~i~v~d~~~~~~~~~~~-- 346 (860)
..|.+|+..| +.+++... +..-... ......+.++++.| +...+.+++.. | .|...+ ..+..-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~-g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAART-GHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC---CCEEEEEES-STTSCCEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecC-CCCCccEEEeC-CCCCCceECCcc
Confidence 4677888777 44554322 2222211 23445799999998 33344444433 3 343332 2222111111
Q ss_pred ----C--------cccCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCeeEEEeec-------------------CCCc
Q 038577 347 ----G--------HYFDVNCLAYSPD--SQLLATGADDNKVKVWTVSSGFCFVTFTE-------------------HTNA 393 (860)
Q Consensus 347 ----~--------~~~~v~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------------~~~~ 393 (860)
. ....|.++++.|. ...+.++...+.|...+ ..++.-..+.. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 0 1124778888862 44555555556555443 22332222211 1235
Q ss_pred eEEEEEeeC-CCEEEEEeCCCcEEEEEccccceeeEeeCCC------------CCcEEEEEECCC-CCEEEEEecCCCeE
Q 038577 394 VTALHFMAN-NHSLLSASLDGTVRAWDLFRYRNFRTFTTPS------------SRQFVSLASDQS-GEVICAGTLDSFEI 459 (860)
Q Consensus 394 v~~i~~~~~-~~~l~s~~~dg~i~~wd~~~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~l~~~~~~~~~i 459 (860)
+.+|.+.|. ...++.+..++.+...+ ..++....+.... ...+.++.++|. ...+.++... .|
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~--gl 255 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC--GI 255 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT--EE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC--eE
Confidence 788999873 34555554444443322 2233332222110 124788899886 3566666544 45
Q ss_pred EEEECCCCceEEEecC--cc---cCeEEEEEcCC-CCEEEEEeC-----------CCcEEEEEccCCcceeEEc----cc
Q 038577 460 FVWSMKTGRLLDILSG--HE---GPVHGLVFSPT-NATLASSSW-----------DKTVRLWNVFEGKGSVESF----PH 518 (860)
Q Consensus 460 ~v~d~~~~~~~~~~~~--h~---~~v~~l~~s~~-~~~l~s~~~-----------dg~i~iwd~~~~~~~~~~~----~~ 518 (860)
+..+- .++.-..+.. .. ..+.+++++|. ...+..+.. ++...+|...++-...... +.
T Consensus 256 ~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~ 334 (394)
T 3b7f_A 256 YRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPT 334 (394)
T ss_dssp EEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCC
T ss_pred EEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCC
Confidence 55542 2333333221 11 23567888763 333444331 3334566554432122211 11
Q ss_pred CC-----CeEEEEEeeC-CCEEEEEeCCCeEEE
Q 038577 519 TH-----DVLTVVYRPD-GRQLACSTLDGQIHF 545 (860)
Q Consensus 519 ~~-----~v~~~~~s~~-~~~l~~~~~dg~i~i 545 (860)
.. ....++++|. ...|+.++.++.|..
T Consensus 335 ~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 335 DQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp SSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE
T ss_pred ccccceEEEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 11 1135778874 345666665655443
No 359
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=85.38 E-value=29 Score=33.87 Aligned_cols=188 Identities=11% Similarity=0.127 Sum_probs=111.1
Q ss_pred CCCCEEEEEEcCCeEEEEECCCceeE-------EEEee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEE---
Q 038577 274 RGLDMVVVGFSNGVFGLYQMPDFVCI-------HLLSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYI--- 342 (860)
Q Consensus 274 ~~~~~l~~~~~~g~i~~~~~~~~~~~-------~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~--- 342 (860)
|+...+++.+.+|.|+-..+...+.. ..+.. ..+.+..+........+++.+.. |.++-.....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~-G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNE-GKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETT-SEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECC-CeEEEEEHHHCCCCCcc
Confidence 45667888999999988876543221 11111 22345555555566666666665 87776654321110
Q ss_pred E---------EecCcccCeEEEEEcC---CCCEEEEEeCCCcEEEEECCC-------CeeEEEeecCCCceEEEEEeeCC
Q 038577 343 L---------KQQGHYFDVNCLAYSP---DSQLLATGADDNKVKVWTVSS-------GFCFVTFTEHTNAVTALHFMANN 403 (860)
Q Consensus 343 ~---------~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~ 403 (860)
. .+. ....|.++...+ +...++..+..|.++...+.. |.....+.. .+.+..+....+.
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~ 162 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD 162 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC
Confidence 0 011 123344443332 456788889999999887742 222223333 4566666666556
Q ss_pred CEEEEEeCCCcEEEEEcccc-------ceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECC
Q 038577 404 HSLLSASLDGTVRAWDLFRY-------RNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMK 465 (860)
Q Consensus 404 ~~l~s~~~dg~i~~wd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~ 465 (860)
..++..+.+|.+..+....- +-.+.+.......+..+..-.++..+++.+..+ .....++.
T Consensus 163 ~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G-~~kr~~~~ 230 (312)
T 1suu_A 163 EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENG-YGKRLNMS 230 (312)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTS-EEEEEEGG
T ss_pred CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCC-ceEEEEHH
Confidence 68889999999998887542 233344444455666766655666777777777 77777765
No 360
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=85.14 E-value=29 Score=33.73 Aligned_cols=231 Identities=12% Similarity=0.084 Sum_probs=125.8
Q ss_pred CCCCEEEEEEcCCeEEEEECCCceeEEE-------Eee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc---C----
Q 038577 274 RGLDMVVVGFSNGVFGLYQMPDFVCIHL-------LSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWEWR---S---- 338 (860)
Q Consensus 274 ~~~~~l~~~~~~g~i~~~~~~~~~~~~~-------~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~---~---- 338 (860)
|+.+.+++.+.+|.|+--.+.+.+.... +.. ..+.+..+........+++.+.. |.++-+... .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~-G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSR-GRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETT-SEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECC-CEEEEEEhhHCcCCCCC
Confidence 3456788889999998877765433221 111 22344455555566666666665 776655432 2
Q ss_pred --ceEEE---EecCcccCeEEEEEc---CCCCEEEEEeCCCcEEEEECCC-------CeeEEEeecCCCceEEEEEeeCC
Q 038577 339 --ESYIL---KQQGHYFDVNCLAYS---PDSQLLATGADDNKVKVWTVSS-------GFCFVTFTEHTNAVTALHFMANN 403 (860)
Q Consensus 339 --~~~~~---~~~~~~~~v~~~~~s---~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~ 403 (860)
|..+. .+ .....|.++... .++.+++..+..|.++...+.. +.....+..+ +.+..+....+.
T Consensus 80 a~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 11111 11 123345555432 3566788999999999987642 2122223333 566666665556
Q ss_pred CEEEEEeCCCcEEEEEccccc-------eeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCCc-------e
Q 038577 404 HSLLSASLDGTVRAWDLFRYR-------NFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTGR-------L 469 (860)
Q Consensus 404 ~~l~s~~~dg~i~~wd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~~-------~ 469 (860)
..++..+.+|.+..++...-. -.+.+.......+.++...+++..+++.+..| ..+-.++..-. -
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G-~~Kr~~~~e~~~~~Rg~kG 236 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNG-YGKRTAVAEYPTKSRATKG 236 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTS-EEEEECGGGSCCCCTTSCC
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCC-ceEEEEHHHhccCCCCCCC
Confidence 678888899998888874321 22233344455677766555566777777777 67777663211 1
Q ss_pred EEE--ecCcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q 038577 470 LDI--LSGHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE 508 (860)
Q Consensus 470 ~~~--~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 508 (860)
+.. +....+.+..+....+...++..+.+|.+.-+++..
T Consensus 237 ~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 237 VISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 111 222224554444433445555666677666666544
No 361
>3dwl_G Actin-related protein 2/3 complex subunit 5; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=85.05 E-value=1.7 Score=36.27 Aligned_cols=67 Identities=15% Similarity=0.124 Sum_probs=54.8
Q ss_pred HHHHHhhcCcCCcHHHHHHHHhcC------------ChHHHHHHhHhcCCCccchhcccCCHHHHHHHHHHHHhhhccC
Q 038577 727 PEAVDAALNEDQPKRALILSLRLN------------EDNLIKKCIFAISPVDIPAVASSIPYRYMQRLIEALSDLLESC 793 (860)
Q Consensus 727 ~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~~~~~l~~~~~~~i~~~~~~l~~~~~~~ll~~l~~~l~~~ 793 (860)
..+++..+..+.+..+|..+|..- ....++++|.+++.++|+.++..|..+....|++||=+-++..
T Consensus 40 ~~qvr~lL~~g~~~~ALk~aL~~pP~~~~~~~~K~~~~~~Vl~vL~siK~sdI~~~v~~L~~~~~D~LMKYiYkGm~~~ 118 (152)
T 3dwl_G 40 IPQARSAIQTGNALQGLKTLLSYVPYGNDVQEVRTQYLNAFVDVLSNIRAADIPAFVKECSTEEIDNIVNFIYRGLANP 118 (152)
T ss_dssp HHHHHHHHHHSCCHHHHHHHTSSCCCSCSCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHSCHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHHHHHccHHHHHHHHHHhCHHHHHHHHHHHHHhccCc
Confidence 355666777788888888887641 1246889999999999999999999999999999999999764
No 362
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=84.13 E-value=7.5 Score=32.22 Aligned_cols=80 Identities=16% Similarity=0.190 Sum_probs=63.9
Q ss_pred HHHHhhcCcCCcHHHHHHHHhcCChHHHHHHhHhcCCCcc-chhcccCCHHHHHHHHHHHHhhhccCCChhhHHHHHHHH
Q 038577 728 EAVDAALNEDQPKRALILSLRLNEDNLIKKCIFAISPVDI-PAVASSIPYRYMQRLIEALSDLLESCPHLEFMLRWCQEL 806 (860)
Q Consensus 728 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~i-~~~~~~l~~~~~~~ll~~l~~~l~~~~~~~~~~~~l~~~ 806 (860)
+++...+.++.|-.++..+|..++.+.+..+...++|+.| ...=..|+..-+..+++-|+.-| ..+.+.=..|+...
T Consensus 5 ~~I~~Ll~~g~~eeAf~~aL~ssd~~lv~~lc~~~dp~~~~~~~~~~Lsq~vLLSLiqqls~dL--~~~~~~Kl~WLe~v 82 (139)
T 2vxg_A 5 DSIKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSNQAFAPEGCRLEQKVLLSLIQQISADM--TNHNELKQRYLNEA 82 (139)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHSCHHHHTC----CCCHHHHHHHHHHHHHCC--TTCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHhCcHHHHHHHHHcCCHHHhcCCCCCCccHHHHHHHHHHHHHHh--ccCcHHHHHHHHHH
Confidence 3466677889999999999999999999999999999875 22225678888889999999888 55667778999988
Q ss_pred HHH
Q 038577 807 CKT 809 (860)
Q Consensus 807 l~~ 809 (860)
+..
T Consensus 83 l~a 85 (139)
T 2vxg_A 83 LLA 85 (139)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 363
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=82.83 E-value=43 Score=33.91 Aligned_cols=236 Identities=13% Similarity=0.116 Sum_probs=115.3
Q ss_pred CCEEEEEeCCCcEEEEECCCC--------e---eEEEeec-CCCceEEEEEeeCCCEEEEEeCCCcEEEEEccccc----
Q 038577 361 SQLLATGADDNKVKVWTVSSG--------F---CFVTFTE-HTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYR---- 424 (860)
Q Consensus 361 ~~~l~~~~~dg~i~iwd~~~~--------~---~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~---- 424 (860)
....+.-..||.|+.|-.... . ....+.. ....+..++++....+.+....||.|..|-....-
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCS
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCC
Confidence 345555567788888854321 1 1111211 22345556666666677777889999999654311
Q ss_pred -------eeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCC-Cc----------eEEEecC-cccCeEEEEE
Q 038577 425 -------NFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKT-GR----------LLDILSG-HEGPVHGLVF 485 (860)
Q Consensus 425 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~-~~----------~~~~~~~-h~~~v~~l~~ 485 (860)
....+.......+..++.. ....++-..++ .|+.|-... ++ ....+.. ....|..++.
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G-~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTS-CEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCC-eEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 1111111122234444433 33444445555 788886432 11 0111111 2235667766
Q ss_pred cCCCCEEEEEeCCCcEEEEEccCCcc----------eeEEcc--cCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCce
Q 038577 486 SPTNATLASSSWDKTVRLWNVFEGKG----------SVESFP--HTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLNGEL 553 (860)
Q Consensus 486 s~~~~~l~s~~~dg~i~iwd~~~~~~----------~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~ 553 (860)
.......+....||.|+.|-....-. ...... ....|..++.. ..+.+.-..+|.|+.|-....-.
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~Gq 296 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHR 296 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGT
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCC
Confidence 54345666677899999996532111 111111 12245555543 34555557899999997643221
Q ss_pred eEEEecccccCCCccccccccccccCCCCcEEEEEEecCCCEEEEecCCCeEEEEECC
Q 038577 554 MYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLCYSADGSYILAGGSSKYICMYDVA 611 (860)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~ 611 (860)
+..-.... ... ........+..|..++. .....++...||.|+.|=..
T Consensus 297 LG~g~~~~------~~~--P~~v~~l~~~~v~~ia~--G~~h~~al~~~G~v~~wG~n 344 (389)
T 3kci_A 297 LGHGSDDH------VRR--PRQVQGLQGKKVIAIAT--GSLHCVCCTEDGEVYTWGDN 344 (389)
T ss_dssp TCSSSCCC------EEE--EEECGGGTTCCEEEEEE--CSSEEEEEETTCCEEEEECC
T ss_pred CCCCCCcc------ccC--CeEeccCCCCCEEEEEe--ccCeEEEECCCCCEEEeeCC
Confidence 11000000 000 00000111223555544 44455666788889988654
No 364
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=81.20 E-value=43 Score=32.78 Aligned_cols=231 Identities=12% Similarity=0.087 Sum_probs=126.0
Q ss_pred CCCCEEEEEEcCCeEEEEECCCcee----EEEEeecCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc---C------ce
Q 038577 274 RGLDMVVVGFSNGVFGLYQMPDFVC----IHLLSISREKITTAVFNELGNWLVFGCAKLGQLLVWEWR---S------ES 340 (860)
Q Consensus 274 ~~~~~l~~~~~~g~i~~~~~~~~~~----~~~~~~~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~---~------~~ 340 (860)
|+.+.+++.+.+|.|+--.+...+. ...+. ..+.+..+........+++.+.. |.++-+... . |.
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~-Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNK-GNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETT-SEEEEEEGGGSCBCCTTSCCE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCEEEEEECC-CEEEEEEHHHCcCCCCCCCCc
Confidence 5566788889999888776542211 01111 22345555555566667666665 776655432 1 22
Q ss_pred EEEEe-c-CcccCeEEEE-EcC--CCCEEEEEeCCCcEEEEECCC--------CeeEEEeecCCCceEEEEEeeCCCEEE
Q 038577 341 YILKQ-Q-GHYFDVNCLA-YSP--DSQLLATGADDNKVKVWTVSS--------GFCFVTFTEHTNAVTALHFMANNHSLL 407 (860)
Q Consensus 341 ~~~~~-~-~~~~~v~~~~-~s~--~~~~l~~~~~dg~i~iwd~~~--------~~~~~~~~~~~~~v~~i~~~~~~~~l~ 407 (860)
.+... . .....|.++. ..+ ++.+++.++.+|.++...+.. |.....+.. .+.+..+........++
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 11111 0 1123455543 332 256789999999999988742 222222332 35666666655666788
Q ss_pred EEeCCCcEEEEEcccc-------ceeeEeeCCCCCcEEEEEECCCCC-EEEEEecCCCeEEEEECCC-------CceEEE
Q 038577 408 SASLDGTVRAWDLFRY-------RNFRTFTTPSSRQFVSLASDQSGE-VICAGTLDSFEIFVWSMKT-------GRLLDI 472 (860)
Q Consensus 408 s~~~dg~i~~wd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~i~v~d~~~-------~~~~~~ 472 (860)
..+.+|.+..+....- +-.+.+.......+.++..-+++. .+++.+..| ..+..++.. ++-+..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G-~gKr~~~~e~~~~~Rg~kGv~~ 238 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRG-AVKKMKLTEFEKATRAKRGVVI 238 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTS-EEEEEEGGGSCCCCTTSCCEEC
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCC-ceEEEEHHHccccCCCCCCEEC
Confidence 8999999888887432 223333344445566665444444 677777777 666666643 122222
Q ss_pred ec---CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q 038577 473 LS---GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE 508 (860)
Q Consensus 473 ~~---~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 508 (860)
++ .....+..+....++..++..+..|.+....+..
T Consensus 239 ~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 239 LRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGG
T ss_pred eeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhh
Confidence 21 1222454333333344566666777766666544
No 365
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=77.51 E-value=27 Score=40.49 Aligned_cols=42 Identities=2% Similarity=0.099 Sum_probs=36.8
Q ss_pred CCcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeec
Q 038577 581 GKCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQIT 622 (860)
Q Consensus 581 ~~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 622 (860)
...+.+++..++..++++.+.|+++++|++.+++++.+....
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 345788888899999999999999999999999999887654
No 366
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=75.30 E-value=29 Score=27.55 Aligned_cols=59 Identities=5% Similarity=-0.019 Sum_probs=29.3
Q ss_pred CCEEEEEcCCCcEEEEEcccCeEEEEeec--CCceeEEEECCCCCEEEEEeCCeEEEEeCCC
Q 038577 64 GTFLLTVDENQRCHFINLHCHVVLHRVRF--KYPVNAILFSPNGKYIAVGTGKLVQIWRSPG 123 (860)
Q Consensus 64 g~~la~~~~d~~i~vwd~~~~~~~~~~~~--~~~v~~~~fspdg~~la~~~~~~i~iwd~~~ 123 (860)
|++.+.-..||.+.+|+...+..+..... ...-..+.+..+|.++....++.+ +|...+
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 33333334444444444322333333221 122346778888887776544443 776554
No 367
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=74.76 E-value=60 Score=30.90 Aligned_cols=197 Identities=10% Similarity=0.024 Sum_probs=111.5
Q ss_pred ceeEEEEEeeCCCEEEEEEccCCcEEEE---EccCceEEEEecCcccCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCe
Q 038577 307 EKITTAVFNELGNWLVFGCAKLGQLLVW---EWRSESYILKQQGHYFDVNCLAYSP-DSQLLATGADDNKVKVWTVSSGF 382 (860)
Q Consensus 307 ~~i~~~~~s~~~~~l~~~~~~~g~i~v~---d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~ 382 (860)
+.+..+.......++++.+.. |.++-- ++........+ .....|..+.... +...++..+.+|.++...+..-.
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~-G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~ 101 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNR-GRVYWIAGSQALQGSKVSLK-SREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE 101 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETT-SEEEEECSHHHHTSEECCCS-STTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT
T ss_pred CeEEEEEEECCCCEEEEEcCC-CeEEEEEhhhCccCcccccC-CCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh
Confidence 345555544555555555554 766543 33322111112 2344566654421 46789999999999998875421
Q ss_pred ------eEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccc-------ceeeEeeCCCCCcEEEEEECCCCCEE
Q 038577 383 ------CFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRY-------RNFRTFTTPSSRQFVSLASDQSGEVI 449 (860)
Q Consensus 383 ------~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l 449 (860)
....+. ..+.+..+........++..+..|.+..+....- +-.+.+.......+..+...+++..+
T Consensus 102 ~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~l 180 (276)
T 3no0_A 102 YKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYL 180 (276)
T ss_dssp TCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEE
T ss_pred hhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEE
Confidence 111222 2345666666656668888999999888876432 12222333444566666655666778
Q ss_pred EEEecCCCeEEEEECCC-------CceEEEecCcccCeEEEEEcCCCCEEEEEeCCCcEEE--EEccC
Q 038577 450 CAGTLDSFEIFVWSMKT-------GRLLDILSGHEGPVHGLVFSPTNATLASSSWDKTVRL--WNVFE 508 (860)
Q Consensus 450 ~~~~~~~~~i~v~d~~~-------~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~dg~i~i--wd~~~ 508 (860)
+..+..| .++...+.. ++-+..+ ...+.+..+....+...++..+.+|.+.. ++...
T Consensus 181 l~~T~~G-~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 181 LVITAKG-RVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEETTS-CEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEeCCC-cEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 8888777 777776542 2223333 23344555544444456666777787777 76643
No 368
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=74.26 E-value=67 Score=31.25 Aligned_cols=190 Identities=7% Similarity=0.044 Sum_probs=113.6
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCee-------EEEee-cCCCceEEEEEeeCCCEEEEEeCCCcEEEEEcccccee----
Q 038577 359 PDSQLLATGADDNKVKVWTVSSGFC-------FVTFT-EHTNAVTALHFMANNHSLLSASLDGTVRAWDLFRYRNF---- 426 (860)
Q Consensus 359 ~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~-~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~~~~~---- 426 (860)
++...+++.+.+|.|+-..+..... +..+. ...+.+..+........++..+..|.++-+....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4566788899999999887643211 11111 12345556666666678888889998877765421111
Q ss_pred ------eEeeCCCCCcEEEEEECC---CCCEEEEEecCCCeEEEEECCCC-------ceEEEecCcccCeEEEEEcCCCC
Q 038577 427 ------RTFTTPSSRQFVSLASDQ---SGEVICAGTLDSFEIFVWSMKTG-------RLLDILSGHEGPVHGLVFSPTNA 490 (860)
Q Consensus 427 ------~~~~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~i~v~d~~~~-------~~~~~~~~h~~~v~~l~~s~~~~ 490 (860)
..+.......+.++..-+ +..+++..+..| .++...+..- .....+.. .+.+..+....++.
T Consensus 86 ~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G-~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASG-KIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTS-EEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCC-eEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 112223334455554332 466778888887 8888776432 22222332 45666666655567
Q ss_pred EEEEEeCCCcEEEEEccCCccee------EE--cccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 491 TLASSSWDKTVRLWNVFEGKGSV------ES--FPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 491 ~l~s~~~dg~i~iwd~~~~~~~~------~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
.++..+.+|.+..+....-.... .. ......|.++...+++..+++.+..|..+...+..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 78888999999999875421110 11 12345566666655667788888999988888754
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=73.66 E-value=77 Score=31.68 Aligned_cols=148 Identities=13% Similarity=0.069 Sum_probs=86.4
Q ss_pred cCCCCEEEEEEcCCeEEEEECCCce-------eEEEEee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEEcc---C---
Q 038577 273 HRGLDMVVVGFSNGVFGLYQMPDFV-------CIHLLSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWEWR---S--- 338 (860)
Q Consensus 273 ~~~~~~l~~~~~~g~i~~~~~~~~~-------~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~---~--- 338 (860)
-|+...+++.+.+|.|+--.+.+.. -...+.. ..+.+..+........+++.+.. |.++-+... .
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~-G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSS-GKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETT-SEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCC-CeEEEEEHHHCcCCCc
Confidence 4677789999999999887653211 1222222 23355555555566667766665 776655432 1
Q ss_pred ---ceEEEEe--cCcccCeEEEEEc---CCCCEEEEEeCCCcEEEEECCC-------CeeEEEeecCCCceEEEEEeeCC
Q 038577 339 ---ESYILKQ--QGHYFDVNCLAYS---PDSQLLATGADDNKVKVWTVSS-------GFCFVTFTEHTNAVTALHFMANN 403 (860)
Q Consensus 339 ---~~~~~~~--~~~~~~v~~~~~s---~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~i~~~~~~ 403 (860)
|..+..+ -.....|.++... .++.+++.++..|.++...+.. |.....+.. .+.+..+......
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD 161 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC
Confidence 1111110 0123345554433 2456899999999999987642 222222332 4456566665556
Q ss_pred CEEEEEeCCCcEEEEEccc
Q 038577 404 HSLLSASLDGTVRAWDLFR 422 (860)
Q Consensus 404 ~~l~s~~~dg~i~~wd~~~ 422 (860)
..++..+.+|.+..+....
T Consensus 162 ~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp CEEEEEETTSEEEEEEGGG
T ss_pred ceEEEEeCCCeEEEEEccc
Confidence 6788888999988887643
No 370
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=72.86 E-value=1.4e+02 Score=34.46 Aligned_cols=41 Identities=17% Similarity=0.238 Sum_probs=35.6
Q ss_pred CeEEEEEeeCCCEEEEEeCCCeEEEEeCCCCceeEEEeccc
Q 038577 521 DVLTVVYRPDGRQLACSTLDGQIHFWDPLNGELMYTIEGRR 561 (860)
Q Consensus 521 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 561 (860)
.+.+++..++..++++-+.|+++++|++.+++++.+..-..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence 46778888888999999999999999999999999876543
No 371
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=72.81 E-value=74 Score=31.14 Aligned_cols=229 Identities=10% Similarity=0.065 Sum_probs=129.7
Q ss_pred CEEEEEEcCCeEEEEECCCcee-------EEEEee-cCceeEEEEEeeCCCEEEEEEccCCcEEEEE---ccC------c
Q 038577 277 DMVVVGFSNGVFGLYQMPDFVC-------IHLLSI-SREKITTAVFNELGNWLVFGCAKLGQLLVWE---WRS------E 339 (860)
Q Consensus 277 ~~l~~~~~~g~i~~~~~~~~~~-------~~~~~~-~~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d---~~~------~ 339 (860)
+.+++.+.+|.|+--.+.+... ...+.. ..+.+..+........+++.+.. |.++... +.. |
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~-Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQ-GRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETT-SEEEEEEGGGSCBCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCC-CeEEEEEHHHCcCCCccCCC
Confidence 4567777888887665432111 111111 12345555555566666666555 7666543 322 1
Q ss_pred eEEEEe-c-CcccCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCC-------eeEEEeecCCCceEEEEEeeCCCEEE
Q 038577 340 SYILKQ-Q-GHYFDVNCLAYSP---DSQLLATGADDNKVKVWTVSSG-------FCFVTFTEHTNAVTALHFMANNHSLL 407 (860)
Q Consensus 340 ~~~~~~-~-~~~~~v~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~i~~~~~~~~l~ 407 (860)
..+..+ . .....|.++..-+ +..++++.+.+|.++...+... .....+.. .+.+..+........++
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE
Confidence 221111 1 1233455554333 5779999999999999876532 22222333 44566666655667888
Q ss_pred EEeCCCcEEEEEcc--cc-------ceeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC-------ceEE
Q 038577 408 SASLDGTVRAWDLF--RY-------RNFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG-------RLLD 471 (860)
Q Consensus 408 s~~~dg~i~~wd~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~-------~~~~ 471 (860)
..+..|.+..+... .- +-.+.+.......+.++...+++..++..+..| .++.-.+..- +-+.
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G-~~Krt~l~e~~~~~R~~~G~~ 240 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGG-YAKRTAIEEYPVQGRGGKGVL 240 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTS-EEEEEEGGGSCBCCTTSCCEE
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCC-cEEEEEHHHccccCcCCCcEE
Confidence 89999998888776 21 112223344455677777767777888888887 7877775432 2222
Q ss_pred Eec--CcccCeEEEEEcCCCCEEEEEeCCCcEEEEEccC
Q 038577 472 ILS--GHEGPVHGLVFSPTNATLASSSWDKTVRLWNVFE 508 (860)
Q Consensus 472 ~~~--~h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~ 508 (860)
.++ .-.+.+..+....+...++..+.+|.+.-++...
T Consensus 241 ~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 241 TVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp SSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred EEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 222 1134455555444555677777788887777654
No 372
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=70.81 E-value=83 Score=30.82 Aligned_cols=197 Identities=10% Similarity=0.052 Sum_probs=113.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEE---CCC------CeeEEEee--cCCCceEEEEEee---CCCEEEEEeCCCcEE
Q 038577 351 DVNCLAYSPDSQLLATGADDNKVKVWT---VSS------GFCFVTFT--EHTNAVTALHFMA---NNHSLLSASLDGTVR 416 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~~~~~dg~i~iwd---~~~------~~~~~~~~--~~~~~v~~i~~~~---~~~~l~s~~~dg~i~ 416 (860)
.+..+........++.-+..|.++... +.. |..+..+- .....|.++...+ +..+++.++.+|.++
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 344444444555666666677766554 322 22211111 1344566655443 467999999999999
Q ss_pred EEEccccce-----eeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECC--CCce-------EE--EecCcccCe
Q 038577 417 AWDLFRYRN-----FRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMK--TGRL-------LD--ILSGHEGPV 480 (860)
Q Consensus 417 ~wd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~--~~~~-------~~--~~~~h~~~v 480 (860)
...+..... ...+.......+..+........++..+..| .+..+... .-.. +. .+. ....|
T Consensus 123 r~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G-~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~V 200 (327)
T 3uc1_A 123 KSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANG-QSIRFSATDEALRPMGRATSGVQGMRFN-IDDRL 200 (327)
T ss_dssp EEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTS-EEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCE
T ss_pred EeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCC-eEEEEECcccccCcCCcCCCCeeeecCC-CCCEE
Confidence 988765432 2223333444566665555666777777777 77777765 2111 11 122 24557
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEccCCcc-------eeE--EcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCC
Q 038577 481 HGLVFSPTNATLASSSWDKTVRLWNVFEGKG-------SVE--SFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPL 549 (860)
Q Consensus 481 ~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~-------~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~ 549 (860)
.++...+++..++..+..|.++.-.+..-.. ... +....+.+..+....+...++..+.+|.+.-++..
T Consensus 201 v~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 201 LSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp EEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred EEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 7777766777899999999999887643221 111 11213445555544455566667777777666654
No 373
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=70.53 E-value=80 Score=30.57 Aligned_cols=189 Identities=10% Similarity=0.062 Sum_probs=108.3
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEE---------EeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc-------
Q 038577 359 PDSQLLATGADDNKVKVWTVSSGFCFV---------TFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR------- 422 (860)
Q Consensus 359 ~~~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~------- 422 (860)
|+...+++.+.+|.|+--.+.+..... .+. ..+.+..+........++..+..|.+.-+....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 345678888999999877765432211 122 234455555555666788888888876665432
Q ss_pred --cceee-EeeCCCCCcEEEEEE-C--CCCCEEEEEecCCCeEEEEECCCCc-------eEEEecCcccCeEEEEEcCCC
Q 038577 423 --YRNFR-TFTTPSSRQFVSLAS-D--QSGEVICAGTLDSFEIFVWSMKTGR-------LLDILSGHEGPVHGLVFSPTN 489 (860)
Q Consensus 423 --~~~~~-~~~~~~~~~~~~~~~-~--~~~~~l~~~~~~~~~i~v~d~~~~~-------~~~~~~~h~~~v~~l~~s~~~ 489 (860)
+..+. .+.......+.++.. . .++.+++..+..| .++...+.... ....+..+ +.+..+....+.
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G-~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANG-TVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTS-EEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCC-eEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 11111 122233445655543 2 3566788888888 88888764221 11123333 556665555556
Q ss_pred CEEEEEeCCCcEEEEEccCCcce-------e-EEcccCCCeEEEEEeeCCCEEEEEeCCCeEEEEeCCC
Q 038577 490 ATLASSSWDKTVRLWNVFEGKGS-------V-ESFPHTHDVLTVVYRPDGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 490 ~~l~s~~~dg~i~iwd~~~~~~~-------~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~ 550 (860)
..++..+.+|.+..++...-... . ........|.++...+++..+++.+..|.++-.++..
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 67888888998888877432211 1 0112345566666555666788888889888877643
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=67.91 E-value=1.1e+02 Score=30.96 Aligned_cols=136 Identities=12% Similarity=-0.018 Sum_probs=65.9
Q ss_pred CCEEEeeeCCeEEEEECCC-C-cEEee-ccCCccCeeEEEEcC--CCCEEEEEcCCC----cEEEEEcccCeEEEEeec-
Q 038577 23 NTKLISPVGNRVSVTDLIK-S-KTVTL-PVESSSNICRIAVSP--DGTFLLTVDENQ----RCHFINLHCHVVLHRVRF- 92 (860)
Q Consensus 23 g~~l~~~~~~~i~v~d~~~-~-~~~~~-~~~h~~~v~~va~sp--dg~~la~~~~d~----~i~vwd~~~~~~~~~~~~- 92 (860)
...|..+...-+.+++... + .-... .......|.+|++.| ++...|.+ ..| .|... ...|+.-..+..
T Consensus 22 ~g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s-~D~G~tW~~~~~~ 99 (394)
T 3b7f_A 22 PVMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRS-DDGGGNWTEATRP 99 (394)
T ss_dssp CCEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEE-SSTTSCCEECSBC
T ss_pred CCEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEe-CCCCCCceECCcc
Confidence 3356666655576666543 2 22221 112235699999998 55555543 333 33332 233322222211
Q ss_pred ---C-----------CceeEEEECC---CCCEEEEEeCCeEEEEeCCCCCcccceeEEEEEee----------------c
Q 038577 93 ---K-----------YPVNAILFSP---NGKYIAVGTGKLVQIWRSPGFKKEVFAFELIRTLA----------------D 139 (860)
Q Consensus 93 ---~-----------~~v~~~~fsp---dg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~~~~----------------~ 139 (860)
. ..|.++++.| .+.+.+.+..+.|...+- .++ . +..+..+. .
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~-t---W~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGA-S---WEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESS-TTS-B---CEECHHHHTCTTHHHHHCCC----C
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCC-C---eEECcCccCCccccccccccccCCC
Confidence 1 2477899987 455555556665554432 222 1 21111110 0
Q ss_pred cCCCeEEEEEcCC-CCeEEEeecCCeE
Q 038577 140 CNDKVTALNWSPD-SNYLLVGSKDLAV 165 (860)
Q Consensus 140 h~~~v~~l~~s~d-~~~l~s~~~dg~v 165 (860)
....+.+|.+.|. ...+..+..++.|
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~ggl 201 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSSGGV 201 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEETBEE
T ss_pred CCCceeEEEECCCCCCEEEEEECCCCE
Confidence 1235789999883 4455655555543
No 375
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=67.58 E-value=1.1e+02 Score=30.78 Aligned_cols=166 Identities=10% Similarity=0.115 Sum_probs=95.1
Q ss_pred eEEEEECCCc--eeEEEEeecC------ceeEEEEEe---eC----CCEEEEEEccCCcEEEEEccCceEEEEec-----
Q 038577 287 VFGLYQMPDF--VCIHLLSISR------EKITTAVFN---EL----GNWLVFGCAKLGQLLVWEWRSESYILKQQ----- 346 (860)
Q Consensus 287 ~i~~~~~~~~--~~~~~~~~~~------~~i~~~~~s---~~----~~~l~~~~~~~g~i~v~d~~~~~~~~~~~----- 346 (860)
.|.+||+.+. +.++.+.... ..+..+++. +. +.+..++....+.|.|+|+.+++.-+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4667777777 7776665532 346777777 22 33444444445889999999887655441
Q ss_pred ---------Cc----ccCeEEEEEcCC----CCEEEEEeCCCcEEEEECC-----C---CeeEEEeecC--CCceEEEEE
Q 038577 347 ---------GH----YFDVNCLAYSPD----SQLLATGADDNKVKVWTVS-----S---GFCFVTFTEH--TNAVTALHF 399 (860)
Q Consensus 347 ---------~~----~~~v~~~~~s~~----~~~l~~~~~dg~i~iwd~~-----~---~~~~~~~~~~--~~~v~~i~~ 399 (860)
+. ...+..++++|+ ++.|......+ -++|.+. . ...+..+... ...-..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 135778888887 66776665543 2334332 1 1112222111 123345566
Q ss_pred e-eCCCEEEEEeCCCcEEEEEccc-c---ceeeE-eeCCCCCcEEEEEECCCCCEEEEEe
Q 038577 400 M-ANNHSLLSASLDGTVRAWDLFR-Y---RNFRT-FTTPSSRQFVSLASDQSGEVICAGT 453 (860)
Q Consensus 400 ~-~~~~~l~s~~~dg~i~~wd~~~-~---~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 453 (860)
. .+|..+++--....|..|+..+ . ..... ...+.-.....+.+.++|.+.+...
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 5 5677777777788899999865 1 12222 2233333466777777776555543
No 376
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.04 E-value=17 Score=39.03 Aligned_cols=60 Identities=22% Similarity=0.259 Sum_probs=43.0
Q ss_pred CeEEEEEeeCCCEEEEEeCC------------CeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEEE
Q 038577 521 DVLTVVYRPDGRQLACSTLD------------GQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTLC 588 (860)
Q Consensus 521 ~v~~~~~s~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 588 (860)
..-.|+|+|.|++++.-..+ ..+.+.+..+++...-+.++.. ..++.++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g-------------------aE~TG~~ 537 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-------------------CEVTGIS 537 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT-------------------CEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC-------------------ccCcCee
Confidence 45678999999966655432 2466667777777666655442 4699999
Q ss_pred EecCCCEEEEe
Q 038577 589 YSADGSYILAG 599 (860)
Q Consensus 589 ~s~~g~~l~~~ 599 (860)
|+||++.|++.
T Consensus 538 fspDg~tlfvn 548 (592)
T 3zwu_A 538 FSPDQKTLFVG 548 (592)
T ss_dssp ECTTSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99999988764
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=65.90 E-value=13 Score=39.33 Aligned_cols=55 Identities=18% Similarity=0.160 Sum_probs=41.8
Q ss_pred cEEEe-CCCEEEeeeC-------------CeEEEEECCCCcEEeeccC-CccCeeEEEEcCCCCEEEEEc
Q 038577 17 NAVLS-QNTKLISPVG-------------NRVSVTDLIKSKTVTLPVE-SSSNICRIAVSPDGTFLLTVD 71 (860)
Q Consensus 17 ~~~~s-dg~~l~~~~~-------------~~i~v~d~~~~~~~~~~~~-h~~~v~~va~spdg~~la~~~ 71 (860)
++.|. +|.+.+.... +.|..++..+++...++.+ ...+++.++||||+++|.++-
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 68999 9987774321 2688889889988777654 346789999999999887763
No 378
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=65.34 E-value=19 Score=42.88 Aligned_cols=41 Identities=2% Similarity=0.118 Sum_probs=35.4
Q ss_pred cEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEeecc
Q 038577 583 CFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQITH 623 (860)
Q Consensus 583 ~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~ 623 (860)
.+.+++..++..++++.+.|+++++|++.+++++.+.....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~ 279 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 279 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhh
Confidence 45667778899999999999999999999999999876544
No 379
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=63.01 E-value=22 Score=38.27 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=42.1
Q ss_pred eeEEEEcCCCCEEEEEcCC------------CcEEEEEcccCeEEEEee--cCCceeEEEECCCCCEEEEE
Q 038577 55 ICRIAVSPDGTFLLTVDEN------------QRCHFINLHCHVVLHRVR--FKYPVNAILFSPNGKYIAVG 111 (860)
Q Consensus 55 v~~va~spdg~~la~~~~d------------~~i~vwd~~~~~~~~~~~--~~~~v~~~~fspdg~~la~~ 111 (860)
.-.|+|+|+|++++.-+.+ +.+.+.+..+++..+.+. ....++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999977654322 345566777787766655 56789999999999888765
No 380
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=62.68 E-value=31 Score=37.71 Aligned_cols=38 Identities=8% Similarity=0.310 Sum_probs=31.9
Q ss_pred CcEEEEEEecCCCEEEEecCCCeEEEEECCCceEEEEEee
Q 038577 582 KCFTTLCYSADGSYILAGGSSKYICMYDVADQVLLRRFQI 621 (860)
Q Consensus 582 ~~i~~l~~s~~g~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 621 (860)
..|.++.+ +..+|++-+.|..+|+|++.+++++.....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34565544 578999999999999999999999988776
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=62.34 E-value=32 Score=36.53 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=43.4
Q ss_pred CCeEEEEEeeCCCEEEEEeC------------CCeEEEEeCCCCceeEEEecccccCCCccccccccccccCCCCcEEEE
Q 038577 520 HDVLTVVYRPDGRQLACSTL------------DGQIHFWDPLNGELMYTIEGRRDISGGRLMTDRRSAANSSSGKCFTTL 587 (860)
Q Consensus 520 ~~v~~~~~s~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 587 (860)
.....|+|+++|.+.++... ...+..++..+++....+.+... ..++.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~-------------------aEpnGi 536 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG-------------------CEVTGI 536 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT-------------------CEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC-------------------ccccCC
Confidence 45678999999987774432 12577778878877665544321 248999
Q ss_pred EEecCCCEEEEe
Q 038577 588 CYSADGSYILAG 599 (860)
Q Consensus 588 ~~s~~g~~l~~~ 599 (860)
+||||++.|+++
T Consensus 537 afSPD~ktLfV~ 548 (592)
T 4a9v_A 537 SFSPDQKTLFVG 548 (592)
T ss_dssp EECTTSSEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999999988865
No 382
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=55.47 E-value=1.6e+02 Score=28.76 Aligned_cols=189 Identities=11% Similarity=0.026 Sum_probs=109.2
Q ss_pred CCCCEEEEEeCCCcEEEEECCCC----eeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc---------cce
Q 038577 359 PDSQLLATGADDNKVKVWTVSSG----FCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR---------YRN 425 (860)
Q Consensus 359 ~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~---------~~~ 425 (860)
|+...+++.+.+|.|+--.+... .....+. ..+.+..+........++..+..|.+.-+.... +..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 45667888899999887755311 1111122 234555555666667888888888876665422 121
Q ss_pred ee-EeeCCCCCcEEEE-EECC--CCCEEEEEecCCCeEEEEECCCC------ceEE--EecCcccCeEEEEEcCCCCEEE
Q 038577 426 FR-TFTTPSSRQFVSL-ASDQ--SGEVICAGTLDSFEIFVWSMKTG------RLLD--ILSGHEGPVHGLVFSPTNATLA 493 (860)
Q Consensus 426 ~~-~~~~~~~~~~~~~-~~~~--~~~~l~~~~~~~~~i~v~d~~~~------~~~~--~~~~h~~~v~~l~~s~~~~~l~ 493 (860)
+. .+.......+.++ ...+ ++.+++..+.+| .++...+... +-+. .+.. .+.+..+........++
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G-~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNG-MVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTS-EEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCC-eEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 11 1223334455554 3432 366788888888 8888876421 1121 2222 25566665555566788
Q ss_pred EEeCCCcEEEEEccCCccee------EE--cccCCCeEEEEEeeCCC-EEEEEeCCCeEEEEeCCC
Q 038577 494 SSSWDKTVRLWNVFEGKGSV------ES--FPHTHDVLTVVYRPDGR-QLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 494 s~~~dg~i~iwd~~~~~~~~------~~--~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iwd~~~ 550 (860)
..+.+|.+..++...-.... .. ......|.++...+++. .+++.+..|..+..++..
T Consensus 160 l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 160 LVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 88899998888875422111 11 12344566665544455 788888888877776543
No 383
>4fjo_A DNA repair protein REV1; translesion synthesis, transferase -DNA binding protein COMP transferase-DNA binding protein complex; HET: DNA; 2.72A {Mus musculus} PDB: 2lsg_A* 2lsk_A* 2lsy_A*
Probab=51.56 E-value=37 Score=26.03 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhhhccCCChh---hHHHHHHHHHHHHhh
Q 038577 776 YRYMQRLIEALSDLLESCPHLE---FMLRWCQELCKTHGN 812 (860)
Q Consensus 776 ~~~~~~ll~~l~~~l~~~~~~~---~~~~~l~~~l~~H~~ 812 (860)
...+..|-+||...++ .++.| .++.|+..+++-+++
T Consensus 30 ~~DV~~l~~yL~~lv~-~~~lek~~~vlk~l~rlv~~~~~ 68 (97)
T 4fjo_A 30 EEDILQVVRYCTDLIE-EKDLEKLDLVIKYMKRLMQQSVE 68 (97)
T ss_dssp HHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHhh-ccCHHHHHHHHHHHHHHHhcccc
Confidence 6678888888888774 45555 445566666655543
No 384
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=51.47 E-value=2e+02 Score=28.72 Aligned_cols=190 Identities=10% Similarity=0.053 Sum_probs=111.5
Q ss_pred cCCCCEEEEEeCCCcEEEEECCC---------CeeEEEeecCCCceEEEEEeeCCCEEEEEeCCCcEEEEEccc------
Q 038577 358 SPDSQLLATGADDNKVKVWTVSS---------GFCFVTFTEHTNAVTALHFMANNHSLLSASLDGTVRAWDLFR------ 422 (860)
Q Consensus 358 s~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~i~~~~~~~~l~s~~~dg~i~~wd~~~------ 422 (860)
-|+...+++.+.+|.|+--.+.. +.....+. ....+..+........++..+..|.+.-+....
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46778899999999999865431 22223333 355666666666667788888888877665422
Q ss_pred ---cceee-EeeCCCCCcEEEEEEC---CCCCEEEEEecCCCeEEEEECCCCc-------eEEEecCcccCeEEEEEcCC
Q 038577 423 ---YRNFR-TFTTPSSRQFVSLASD---QSGEVICAGTLDSFEIFVWSMKTGR-------LLDILSGHEGPVHGLVFSPT 488 (860)
Q Consensus 423 ---~~~~~-~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~i~v~d~~~~~-------~~~~~~~h~~~v~~l~~s~~ 488 (860)
+.... .+.......+.++..- .++.+++..+..| .++...+.... ....+.. .+.+..+.....
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G-~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNG-TVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTS-EEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCC-eEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 11111 1223344456555442 2456888888888 88887764322 1112322 345555555555
Q ss_pred CCEEEEEeCCCcEEEEEccCCccee------E--EcccCCCeEEEEEee-------------------------------
Q 038577 489 NATLASSSWDKTVRLWNVFEGKGSV------E--SFPHTHDVLTVVYRP------------------------------- 529 (860)
Q Consensus 489 ~~~l~s~~~dg~i~iwd~~~~~~~~------~--~~~~~~~v~~~~~s~------------------------------- 529 (860)
...++..+..|.+..++...-.... . .......|.++...+
T Consensus 161 ~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------
T ss_pred CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 6678888889988888764322110 0 112344555555444
Q ss_pred ----CCCEEEEEeCCCeEEEEeCCC
Q 038577 530 ----DGRQLACSTLDGQIHFWDPLN 550 (860)
Q Consensus 530 ----~~~~l~~~~~dg~i~iwd~~~ 550 (860)
++..+++.+..|..+...+..
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGG
T ss_pred ccccCCceEEEeeCCCCEEEEEHHH
Confidence 345778888888877777644
No 385
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.16 E-value=1.6e+02 Score=34.99 Aligned_cols=37 Identities=22% Similarity=0.301 Sum_probs=31.2
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEee
Q 038577 352 VNCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFT 388 (860)
Q Consensus 352 v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 388 (860)
+.+++..++..++++-+.|+++|+|++.++.++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 4455667788899999999999999999999888754
No 386
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.15 E-value=80 Score=34.61 Aligned_cols=36 Identities=11% Similarity=0.237 Sum_probs=29.9
Q ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeec
Q 038577 55 ICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRF 92 (860)
Q Consensus 55 v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~ 92 (860)
|.++.+ +..+|++.+.|.++++||+.+++++.....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444433 578999999999999999999999988774
No 387
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=45.98 E-value=1.1e+02 Score=24.03 Aligned_cols=85 Identities=14% Similarity=0.152 Sum_probs=42.5
Q ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCCCCcccceeEEEE
Q 038577 56 CRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPGFKKEVFAFELIR 135 (860)
Q Consensus 56 ~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~~~~~~~~~~~~~ 135 (860)
..+.|.+||.+++.- . .-.+|...+.. ...-..+.+..||.++....++. .+|...+..
T Consensus 22 ~~l~~~~dGnlvl~~--~-~~~vW~sn~~~-------~~~~~~l~l~~dGNLVl~~~~~~-~~W~S~t~~---------- 80 (110)
T 3a0c_A 22 YRLIMQGDCNFVLYD--S-GKPVWASNTGG-------LGSGCRLTLHNNGNLVIYDQSNR-VIWQTKTNG---------- 80 (110)
T ss_dssp EEEEECTTSCEEEEE--T-TEEEEECCCTT-------SCSSCEEEECTTSCEEEECTTCC-EEEECCCCC----------
T ss_pred EEEEEcCCCcEEEEE--C-CEEEEECCCCC-------CCCcEEEEEeCCCCEEEECCCCc-EEEecCCCC----------
Confidence 345555566554442 1 23455543321 12224577778888776654333 467644321
Q ss_pred EeeccCCCeEEEEEcCCCCeEEEeecCCeEEEEeec
Q 038577 136 TLADCNDKVTALNWSPDSNYLLVGSKDLAVRLFYVK 171 (860)
Q Consensus 136 ~~~~h~~~v~~l~~s~d~~~l~s~~~dg~v~vwd~~ 171 (860)
......+.+.++|++++.. + .+|...
T Consensus 81 -----~~g~~~l~l~~dGnlvl~~---~--~~W~S~ 106 (110)
T 3a0c_A 81 -----KEDHYVLVLQQDRNVVIYG---P--VVWATG 106 (110)
T ss_dssp -----SSSCCEEEECTTSCEEEEC---S--EEEECS
T ss_pred -----CCCCEEEEEeCCccEEEEC---C--CEecCC
Confidence 1123456677778755532 2 467543
No 388
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=44.38 E-value=2.6e+02 Score=28.04 Aligned_cols=193 Identities=11% Similarity=0.125 Sum_probs=104.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-----------eeEEEeec-CCCceEEEEEeeCCCEEEEEeCCCcEEEE
Q 038577 351 DVNCLAYSPDSQLLATGADDNKVKVWTVSSG-----------FCFVTFTE-HTNAVTALHFMANNHSLLSASLDGTVRAW 418 (860)
Q Consensus 351 ~v~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~-~~~~v~~i~~~~~~~~l~s~~~dg~i~~w 418 (860)
.+..++++......+.-..||.|+.|-.... .....+.. ....|..++.. ....+....||.|..|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 4555677777777777788999999965321 11111211 12256665543 4466667789999999
Q ss_pred Eccccc-----------eeeEeeCCCCCcEEEEEECCCCCEEEEEecCCCeEEEEECCCC-c----------eEEEecC-
Q 038577 419 DLFRYR-----------NFRTFTTPSSRQFVSLASDQSGEVICAGTLDSFEIFVWSMKTG-R----------LLDILSG- 475 (860)
Q Consensus 419 d~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~v~d~~~~-~----------~~~~~~~- 475 (860)
-....- ....+.......+..++......+.++-..++ .++.|-.... + ....+..
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G-~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 262 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDD-TVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 262 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTT-EEEEEECCGGGTTSSSSCCCEEEEEECGGG
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCC-EEEEEeCCCCCCCCCCCCCCccccEEeccc
Confidence 764311 11112222233466666554345555556666 8888865421 1 1111111
Q ss_pred cccCeEEEEEcCCCCEEEEEeCCCcEEEEEccCCcc--------e--eEEcc--cCCCeEEEEEeeCCCEEEEEeCCCeE
Q 038577 476 HEGPVHGLVFSPTNATLASSSWDKTVRLWNVFEGKG--------S--VESFP--HTHDVLTVVYRPDGRQLACSTLDGQI 543 (860)
Q Consensus 476 h~~~v~~l~~s~~~~~l~s~~~dg~i~iwd~~~~~~--------~--~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i 543 (860)
....|..++.. ....+.-..||.|+.|-...... . ..... ....|..++. .....+....||.|
T Consensus 263 ~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~--G~~h~~al~~~G~v 338 (389)
T 3kci_A 263 TGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIAT--GSLHCVCCTEDGEV 338 (389)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTCCE
T ss_pred CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEe--ccCeEEEECCCCCE
Confidence 12246666553 33444556799999997532110 0 11111 2234555554 34455666789999
Q ss_pred EEEeCCC
Q 038577 544 HFWDPLN 550 (860)
Q Consensus 544 ~iwd~~~ 550 (860)
+.|-.+.
T Consensus 339 ~~wG~n~ 345 (389)
T 3kci_A 339 YTWGDND 345 (389)
T ss_dssp EEEECCT
T ss_pred EEeeCCC
Confidence 9997654
No 389
>3s6n_2 SurviVal of motor neuron protein-interacting PROT; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2leh_A
Probab=43.03 E-value=27 Score=33.02 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=43.9
Q ss_pred chhcccCCHHHHHHHHHHHHhhhccCCChhhHHHHHHHHHHHHhhhhhhcccchhHHHHHHHHHHHHH
Q 038577 768 PAVASSIPYRYMQRLIEALSDLLESCPHLEFMLRWCQELCKTHGNTIQQNSRNLLPSLKSLQKSITRI 835 (860)
Q Consensus 768 ~~~~~~l~~~~~~~ll~~l~~~l~~~~~~~~~~~~l~~~l~~H~~~l~~~~~~~~~~l~~l~~~~~~~ 835 (860)
-..+.+|+...+..+|++++.+++.+....-...|+..||-.=...|.. +....|+.|.+.....
T Consensus 180 l~~l~~ld~~~v~~LL~~~~~wl~~~~~~~~~~~WlyaLLa~Ld~pL~~---~~~s~LR~LaRkc~~l 244 (280)
T 3s6n_2 180 LSIVSRMNQATVTSVLEYLSNWFGERDFTPELGRWLYALLACLEKPLLP---EAHSLIRQLARRCSEV 244 (280)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHGGGTSCCCHHHHHHHHHHHHHCCSSCCH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHhCCCCCH---HHHHHHHHHHHHHHHH
Confidence 4566888999999999999999987555566677988777643333322 3344555555554433
No 390
>3vu7_H DNA repair protein REV1; DNA replication, translesion DNA synthesis, damage tolerance, DNA repair, replication; HET: DNA; 2.80A {Homo sapiens} PDB: 2lsj_A*
Probab=42.81 E-value=36 Score=27.46 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhhhccCCChhhH---HHHHHHHHH
Q 038577 776 YRYMQRLIEALSDLLESCPHLEFM---LRWCQELCK 808 (860)
Q Consensus 776 ~~~~~~ll~~l~~~l~~~~~~~~~---~~~l~~~l~ 808 (860)
...+..|-+||...++ .++.|-+ +.||..+++
T Consensus 57 ~~DV~~l~~yL~~lVe-ek~Lek~~~vlk~l~rlv~ 91 (124)
T 3vu7_H 57 EEDILQVVKYCTDLIE-EKDLEKLDLVIKYMKRLMQ 91 (124)
T ss_dssp HHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh-cccHHHHHHHHHHHHHHHh
Confidence 5667777788877774 4555544 445555554
No 391
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=41.86 E-value=1.1e+02 Score=23.89 Aligned_cols=55 Identities=9% Similarity=0.107 Sum_probs=28.2
Q ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeC
Q 038577 56 CRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRS 121 (860)
Q Consensus 56 ~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~ 121 (860)
..+.+..||.+++.-. ++ +|...+.. ...-..+.+..+|.++....++...+|..
T Consensus 22 ~~L~~q~dGnLvl~~~-~~---vW~snt~~-------~~~~~~l~l~~dGNLVl~~~~~~~~vW~S 76 (111)
T 3mez_A 22 AAFVMQGDCNLVLYNE-AG---GFQSNTHG-------RGVDCTLRLNNRGQLEIHSANSNTPVWVY 76 (111)
T ss_dssp EEEEECTTSCEEEECS-SC---CEECCCTT-------SCSSCEEEECTTSCEEEECSSCSSCSEEE
T ss_pred EEEEEccCCeEEEECC-CC---EEECCccc-------CCcCEEEEEcCCCcEEEEeCCCCEEEEEe
Confidence 4555666666555422 22 66544321 11224567777777766554444446643
No 392
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=41.47 E-value=1.3e+02 Score=23.90 Aligned_cols=25 Identities=20% Similarity=0.688 Sum_probs=15.1
Q ss_pred eEEEECCCCCEEEEEeCCeEEEEeCC
Q 038577 97 NAILFSPNGKYIAVGTGKLVQIWRSP 122 (860)
Q Consensus 97 ~~~~fspdg~~la~~~~~~i~iwd~~ 122 (860)
..+.+..||.++....++. .+|...
T Consensus 63 ~~l~l~~dGNLVl~d~~~~-~lW~S~ 87 (119)
T 1b2p_A 63 CRAVLQPDGVLVVITNENV-TVWQSP 87 (119)
T ss_dssp CEEEECTTSCEEEECTTCC-EEEECS
T ss_pred eEEEEccCCEEEEEeCCCc-EEEcCC
Confidence 4567777887766643333 467544
No 393
>3teq_A Stromal interaction molecule 1; signaling protein; 1.90A {Homo sapiens}
Probab=40.80 E-value=40 Score=25.74 Aligned_cols=46 Identities=7% Similarity=0.028 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhhhhhccc---chhHHHHHHH---HHHHHHHHHHHHHhhccH
Q 038577 802 WCQELCKTHGNTIQQNSR---NLLPSLKSLQ---KSITRIHQDLADTCSSNE 847 (860)
Q Consensus 802 ~l~~~l~~H~~~l~~~~~---~~~~~l~~l~---~~~~~~~~~l~~~~~~~~ 847 (860)
.+-.|-..|+..+-..+. ++...|.++. +....||..+.++||+++
T Consensus 47 ~~gs~~~ahs~slD~vD~~Il~Ak~aL~evt~~l~Er~~RW~qIE~l~gf~i 98 (101)
T 3teq_A 47 LFGTFHVAHSSSLDDVDHKILTAKQALSEATAALRERLHRWQQIEILTGFQI 98 (101)
T ss_dssp HHCHHHHHTCGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred hheeeehhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 455566679988866543 2334444444 444678999999999874
No 394
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=38.50 E-value=1.4e+02 Score=23.16 Aligned_cols=26 Identities=12% Similarity=0.469 Sum_probs=17.2
Q ss_pred eEEEECCCCCEEEEEeCCeEEEEeCCC
Q 038577 97 NAILFSPNGKYIAVGTGKLVQIWRSPG 123 (860)
Q Consensus 97 ~~~~fspdg~~la~~~~~~i~iwd~~~ 123 (860)
..+.+..||.++....++. .||...+
T Consensus 53 ~~L~l~~dGnLvL~d~~~~-~vWss~t 78 (105)
T 4h3o_A 53 CSAVLQSDGNFVVYDSSGR-SLWASHS 78 (105)
T ss_dssp CEEEECTTSCEEEECTTCC-EEEECCC
T ss_pred EEEEEeCCccEEEECCCcE-EEEEecC
Confidence 4578888888777654443 4676554
No 395
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=38.23 E-value=4.7e+02 Score=29.33 Aligned_cols=147 Identities=15% Similarity=0.232 Sum_probs=70.9
Q ss_pred CceeEEEEEeeCCCEEEEEEccCCcEEEEEccCceEEEEecC-------cccCeEEEEEcCCC-CEEEEEeCCCc----E
Q 038577 306 REKITTAVFNELGNWLVFGCAKLGQLLVWEWRSESYILKQQG-------HYFDVNCLAYSPDS-QLLATGADDNK----V 373 (860)
Q Consensus 306 ~~~i~~~~~s~~~~~l~~~~~~~g~i~v~d~~~~~~~~~~~~-------~~~~v~~~~~s~~~-~~l~~~~~dg~----i 373 (860)
...|.+++++|....++.+..+.+.|...+=....... +.. ....+.++++.|.. ..++++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~-~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIP-LNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEE-SCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeE-CccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 35789999998754333333443665554422222222 222 12469999999843 34444433211 3
Q ss_pred EEEEC-CCCeeEEEeecC---------CCceEEEEEeeCC-CEEEEEeCCCcEEEEEc-cccceeeEeeC-----CCCCc
Q 038577 374 KVWTV-SSGFCFVTFTEH---------TNAVTALHFMANN-HSLLSASLDGTVRAWDL-FRYRNFRTFTT-----PSSRQ 436 (860)
Q Consensus 374 ~iwd~-~~~~~~~~~~~~---------~~~v~~i~~~~~~-~~l~s~~~dg~i~~wd~-~~~~~~~~~~~-----~~~~~ 436 (860)
.||.. +.|+.-..+... ...+..++++|.. ..++.+...+.| |.- ..++.-+.+.. .....
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCCCC
Confidence 34433 334333332210 1134567887743 455555534433 322 22333333321 11245
Q ss_pred EEEEEECCC-CCEEEEEecC
Q 038577 437 FVSLASDQS-GEVICAGTLD 455 (860)
Q Consensus 437 ~~~~~~~~~-~~~l~~~~~~ 455 (860)
+..+.++|. +..++++..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 778888874 4455555544
No 396
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=33.70 E-value=1.7e+02 Score=22.78 Aligned_cols=57 Identities=11% Similarity=0.066 Sum_probs=28.9
Q ss_pred eEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCCceeEEEECCCCCEEEEEeCCeEEEEeCCC
Q 038577 56 CRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPVNAILFSPNGKYIAVGTGKLVQIWRSPG 123 (860)
Q Consensus 56 ~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v~~~~fspdg~~la~~~~~~i~iwd~~~ 123 (860)
..+.|..||.+++.-. .-.+|...+.. ...-..+.+..||.++....++. .+|...+
T Consensus 21 ~~L~~q~dGnLvly~~---~~~vW~snt~~-------~~~~~~l~l~~dGNLvl~~~~~~-~~W~S~t 77 (109)
T 3dzw_A 21 YVFIMQEDCNLVLYDV---DKPIWATNTGG-------LDRRCHLSMQSDGNLVVYSPRNN-PIWASNT 77 (109)
T ss_dssp EEEEECTTSCEEEEET---TEEEEECCCTT-------SSSSCEEEECTTSCEEEECTTSC-EEEECCC
T ss_pred EEEEEcCCCcEEEEeC---CEEEEECCccc-------CCCCEEEEEeCCCCEEEECCCCC-EEEECCC
Confidence 4445555665544322 23455543321 12234577888888777654443 4775443
No 397
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=33.02 E-value=1.8e+02 Score=22.80 Aligned_cols=77 Identities=10% Similarity=0.052 Sum_probs=39.9
Q ss_pred EEEe-CCCEEEeeeCCeEEEEECCCCcEEeeccCCccCeeEEEEcCCCCEEEEEcCCCcEEEEEcccCeEEEEeecCCce
Q 038577 18 AVLS-QNTKLISPVGNRVSVTDLIKSKTVTLPVESSSNICRIAVSPDGTFLLTVDENQRCHFINLHCHVVLHRVRFKYPV 96 (860)
Q Consensus 18 ~~~s-dg~~l~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~va~spdg~~la~~~~d~~i~vwd~~~~~~~~~~~~~~~v 96 (860)
+.+. ||+++++..++ +|...+.. ...-..+.+..+|.+++.- .++...+|...+.. ......
T Consensus 24 L~~q~dGnLvl~~~~~---vW~snt~~--------~~~~~~l~l~~dGNLVl~~-~~~~~~vW~S~t~~-----~~~~~~ 86 (111)
T 3mez_A 24 FVMQGDCNLVLYNEAG---GFQSNTHG--------RGVDCTLRLNNRGQLEIHS-ANSNTPVWVYPRSV-----NTVRGN 86 (111)
T ss_dssp EEECTTSCEEEECSSC---CEECCCTT--------SCSSCEEEECTTSCEEEEC-SSCSSCSEEESSSC-----CCCSSC
T ss_pred EEEccCCeEEEECCCC---EEECCccc--------CCcCEEEEEcCCCcEEEEe-CCCCEEEEEecccc-----CCCCcC
Confidence 5555 77777765444 67654431 1112456788888876653 34444577533210 011123
Q ss_pred eEEEECCCCCEEEEE
Q 038577 97 NAILFSPNGKYIAVG 111 (860)
Q Consensus 97 ~~~~fspdg~~la~~ 111 (860)
..+.+-+||.++...
T Consensus 87 ~~l~Lq~dGNlvly~ 101 (111)
T 3mez_A 87 YAATLGPDQHVTIYG 101 (111)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEECCCCeEEEec
Confidence 445666666665553
No 398
>4a5p_A Protein MXIA, protein VIRH; protein transport, type three secretion, export apparatus; HET: MLY; 3.15A {Shigella flexneri}
Probab=31.88 E-value=34 Score=34.15 Aligned_cols=73 Identities=10% Similarity=0.127 Sum_probs=59.8
Q ss_pred CcHHHHHHHHhcCChHHHHHHhHhcCCCccchhcccC-----CHHHHHHHHHHHHhhhccCCChhhHHHHHHHHHHHH
Q 038577 738 QPKRALILSLRLNEDNLIKKCIFAISPVDIPAVASSI-----PYRYMQRLIEALSDLLESCPHLEFMLRWCQELCKTH 810 (860)
Q Consensus 738 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~l-----~~~~~~~ll~~l~~~l~~~~~~~~~~~~l~~~l~~H 810 (860)
..++.|+..++..-..++.++.+.++...|...+++| |...+..+|+.|+++-...++.+++..+++.=|+-+
T Consensus 198 QEvq~LLd~L~~~~P~LVeEl~~~l~l~~i~~VLq~LL~E~VsIRdlrtIlEtLae~a~~~kD~~~LtE~VR~aL~R~ 275 (383)
T 4a5p_A 198 QETKNMLDQFENRYPDLLXEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREXDVITLVEHVRASLSRY 275 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTCCHHHHHHHHHHHHTTTCCCSCHHHHHHHHHHHTTTCCCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHhChHHHHHHHccCCHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHH
Confidence 3456777777777778888888888888888888876 899999999999999998999999888887766533
No 399
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=26.34 E-value=1.8e+02 Score=28.46 Aligned_cols=65 Identities=9% Similarity=0.137 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhhhccCCChhhHHHHHHHHHHHHhhhhhhcccchhHHHHHHHHHHHHHHHHHH
Q 038577 776 YRYMQRLIEALSDLLESCPHLEFMLRWCQELCKTHGNTIQQNSRNLLPSLKSLQKSITRIHQDLA 840 (860)
Q Consensus 776 ~~~~~~ll~~l~~~l~~~~~~~~~~~~l~~~l~~H~~~l~~~~~~~~~~l~~l~~~~~~~~~~l~ 840 (860)
+.++..+.+++...++...+.|-+.--+..=|+-|-.+|...=++-+..|+.|+..++.....++
T Consensus 87 ~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiq 151 (390)
T 1deq_A 87 NTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMK 151 (390)
T ss_pred HHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 56777777777777777777777777777777777777755322222244444444443333333
No 400
>3a5i_A Flagellar biosynthesis protein FLHA; four domains, thioredoxin-like fold, bacterial flagellum BIO bacterial flagellum protein export; 2.80A {Salmonella typhimurium}
Probab=23.83 E-value=45 Score=33.39 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=57.1
Q ss_pred HHHHHHHHhcCChHHHHHHh-HhcCCCccchhcccC-----CHHHHHHHHHHHHhhhccCCChhhHHHHHHHHHHHH
Q 038577 740 KRALILSLRLNEDNLIKKCI-FAISPVDIPAVASSI-----PYRYMQRLIEALSDLLESCPHLEFMLRWCQELCKTH 810 (860)
Q Consensus 740 ~~~l~~~~~~~~~~~~~~~l-~~~~~~~i~~~~~~l-----~~~~~~~ll~~l~~~l~~~~~~~~~~~~l~~~l~~H 810 (860)
++.|+..++..-..++.++. +.++...|...+++| |...+..+|+.|+++-...++.+++..+++.-|.-+
T Consensus 206 vq~LLd~L~~~~p~LVeEl~p~~l~l~~i~~VLq~LL~E~VsIRdlrtIlEaLae~a~~~kD~~~LtE~VR~aL~R~ 282 (389)
T 3a5i_A 206 AQQLLDRVSQEMPKLTEDLVPGVVTLTTLHKVLQNLLAEKVPIRDMRTILETLAEHAPLQSDPHELTAVVRVALGRA 282 (389)
T ss_dssp HHHHHHHHHTTCHHHHHTTTTTTSCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHGGGCCCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHChHHHHHhccCCcCHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 55667777766667777776 778888888888776 788899999999999998999999888888777654
No 401
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=23.21 E-value=8.2e+02 Score=27.35 Aligned_cols=152 Identities=11% Similarity=0.109 Sum_probs=74.4
Q ss_pred CCcEEEEEEccCCCCCccceEEEEcCCccEEEeeecCCCCCCccccCCCCCCCCCCCcceeeeEEeeeeccccC--CCCc
Q 038577 189 RDSVVGCFFSVDKKTDKVNRIYTIARDCYMFSWGFSGNDGKIDETMEDSEPPSPGTPERRVKKWGLLRKDDFSQ--APSK 266 (860)
Q Consensus 189 ~~~i~~~~~~~~~~~~~~~~l~s~~~dg~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 266 (860)
.+.|.+++++|.... .++.++..+.|...+-.. ..|.......... ....
T Consensus 14 ~g~i~~i~~~p~~~~----~~~a~~~~ggv~rS~DgG------------------------~tW~~~~~~~~~~~~~~~~ 65 (789)
T 1sqj_A 14 GGYITGIVAHPKTKD----LLYARTDIGGAYRWDAGT------------------------SKWIPLNDFIEAQDMNIMG 65 (789)
T ss_dssp CSCEEEEEECSSSTT----CEEEEESSSCEEEEETTT------------------------TEEEESCTTCCGGGGGGCS
T ss_pred CCcEEEEEECCCCCC----EEEEEecCCCEEEecCCC------------------------CCeeECccCCCcccccCCc
Confidence 468999999987542 677777777665443222 2665432211000 1346
Q ss_pred eEEEEecCCC-CEEEEEEcCCe----EEEE-ECCCceeEEEEeec---------CceeEEEEEeeCCCEEEEEEccCCcE
Q 038577 267 VTACDYHRGL-DMVVVGFSNGV----FGLY-QMPDFVCIHLLSIS---------REKITTAVFNELGNWLVFGCAKLGQL 331 (860)
Q Consensus 267 v~~~~~~~~~-~~l~~~~~~g~----i~~~-~~~~~~~~~~~~~~---------~~~i~~~~~s~~~~~l~~~~~~~g~i 331 (860)
+.+++++|.. +.++++..... -.|| ....++.-..+... ...+..+++.|.....+......+.|
T Consensus 66 i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl 145 (789)
T 1sqj_A 66 TESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI 145 (789)
T ss_dssp EEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE
T ss_pred eeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE
Confidence 8999999853 45555543311 2333 33334333333221 01345678877543333333322332
Q ss_pred EEEEccC-ceEEEEec------CcccCeEEEEEcCC-CCEEEEEeCC
Q 038577 332 LVWEWRS-ESYILKQQ------GHYFDVNCLAYSPD-SQLLATGADD 370 (860)
Q Consensus 332 ~v~d~~~-~~~~~~~~------~~~~~v~~~~~s~~-~~~l~~~~~d 370 (860)
|.... ++.-.... .....+..+.+.|. +..++++..+
T Consensus 146 --~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 146 --WKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp --EEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred --EEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 32222 21111111 11245788888884 4455555554
No 402
>2x49_A INVA, invasion protein INVA; protein transport, transport, pathogenesis; 1.50A {Salmonella enterica subsp} PDB: 2x4a_A* 3lw9_A
Probab=22.95 E-value=61 Score=31.70 Aligned_cols=73 Identities=15% Similarity=0.147 Sum_probs=59.9
Q ss_pred CcHHHHHHHHhcCChHHHHHHhHhcCCCccchhcccC-----CHHHHHHHHHHHHhhhccCCChhhHHHHHHHHHHHH
Q 038577 738 QPKRALILSLRLNEDNLIKKCIFAISPVDIPAVASSI-----PYRYMQRLIEALSDLLESCPHLEFMLRWCQELCKTH 810 (860)
Q Consensus 738 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~l-----~~~~~~~ll~~l~~~l~~~~~~~~~~~~l~~~l~~H 810 (860)
..++.|+..++..-..++.++-+.++...|...+++| |...+..+++.|+++-...++.+.+..+++.=|+-+
T Consensus 148 qEvq~Lld~l~~~~p~LveElp~~l~l~~i~~VLq~LL~E~VsIRdl~tIlEaLae~a~~~kD~~~LtE~VR~aL~r~ 225 (333)
T 2x49_A 148 QETKHMLDQLEAKFPDLLKEVLRHATVQRISEVLQRLLSERVSVRNMKLIMEALALWAPREKDVINLVEHIRGAMARY 225 (333)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTSCHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHTTTCCCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHChHHHHHHhccCCHHHHHHHHHHHHhCCCCcccHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHH
Confidence 3456777777777778888888888888888888887 889999999999999998899998887777776554
No 403
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.76 E-value=3e+02 Score=21.44 Aligned_cols=15 Identities=20% Similarity=0.193 Sum_probs=9.6
Q ss_pred EEEEECCCCCEEEEE
Q 038577 438 VSLASDQSGEVICAG 452 (860)
Q Consensus 438 ~~~~~~~~~~~l~~~ 452 (860)
..+.+..+|++++..
T Consensus 59 ~~l~l~~dGNLVl~d 73 (113)
T 3mez_B 59 CFMRLGHSGELDITD 73 (113)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEEeCCCcEEEEC
Confidence 346677777776653
Done!