BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038580
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 142/283 (50%), Gaps = 12/283 (4%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
++G+ +G +YK L V + R + +F +E++ H NL+ L GF
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 136 AGPRGEKLIVHPFYKRGNLAQCIRG--GSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
P E+L+V+P+ G++A C+R S W RI++G A GL YLH I
Sbjct: 97 MTP-TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEE 253
IH ++K+ NILLD ++ V DFGL L++ G+ APE + +SE+
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 254 TDIYSFGVIMLELISGKEPIN-ENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
TD++ +GV++LELI+G+ + D+D L +++ + + ++ L D+
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL----QG 271
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDLG 355
N+++ E + + Q+A+ C SP RP + +V+ LE G
Sbjct: 272 NYKD----EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 141/283 (49%), Gaps = 12/283 (4%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
++G+ +G +YK L V + R + +F +E++ H NL+ L GF
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 136 AGPRGEKLIVHPFYKRGNLAQCIRG--GSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
P E+L+V+P+ G++A C+R S W RI++G A GL YLH I
Sbjct: 105 MTP-TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEE 253
IH ++K+ NILLD ++ V DFGL L++ + G+ APE + +SE+
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
Query: 254 TDIYSFGVIMLELISGKEPIN-ENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
TD++ +GV++LELI+G+ + D+D L +++ + + ++ L D+
Sbjct: 224 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDL------ 277
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDLG 355
+ +E + + Q+A+ C SP RP + +V+ LE G
Sbjct: 278 --QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 143/281 (50%), Gaps = 19/281 (6%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+IG +G +YK +L R G+ L+ P + +EF IE L RHP+LV L+GF
Sbjct: 46 LIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF- 103
Query: 136 AGPRGEKLIVHPFYKRGNLAQCIRGGS--GEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
R E ++++ + + GNL + + G + W I IG A GL YLHT R I
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAI 160
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLE--ASASQGYKAPELIKMKDAS 251
IH ++KS NILLD N+ P ++DFG+ GQ L + GY PE +
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGIS-KKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 252 EETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSN 311
E++D+YSFGV++ E++ + I ++ P E +L + + + ++ + P++
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQS-LPREMVNLAEWAVESHNNGQLEQIVDPNL----- 273
Query: 312 SNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLE 352
+ + E + KF A+ C + S RP++ VLWKLE
Sbjct: 274 ---ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 27/285 (9%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+IG +G +YK +L R G+ L+ P + +EF IE L RHP+LV L+GF
Sbjct: 46 LIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGF- 103
Query: 136 AGPRGEKLIVHPFYKRGNLAQCIRGGS--GEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
R E ++++ + + GNL + + G + W I IG A GL YLHT R I
Sbjct: 104 CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAI 160
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLE------ASASQGYKAPELIKM 247
IH ++KS NILLD N+ P ++DFG+ G E+ + + GY PE
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGI-----SKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 248 KDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+E++D+YSFGV++ E++ + I ++ P E +L + + + ++ + P++
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQS-LPREMVNLAEWAVESHNNGQLEQIVDPNL- 273
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLE 352
+ + E + KF A+ C + S RP++ VLWKLE
Sbjct: 274 -------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 126/235 (53%), Gaps = 15/235 (6%)
Query: 52 TEDLVTFRG---GEDLTI--CDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVC 106
TE+L F+G G+D+ I CD+ E IG ++GT+++A S + +
Sbjct: 18 TENLY-FQGAMDGDDMDIPWCDL--NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH 74
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
R EF + ++ +RHPN+V +G P IV + RG+L + + SG
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS-IVTEYLSRGSLYRLLHK-SGARE 132
Query: 167 KWSIIYRISIG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNP 224
+ R+S+ +A G++YLH + PI+H NLKS N+L+D+ Y V DFGL L
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191
Query: 225 TAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI-NENPT 278
T A+ + + APE+++ + ++E++D+YSFGVI+ EL + ++P N NP
Sbjct: 192 TFLSSK-SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 21/238 (8%)
Query: 52 TEDLVTFRG---GEDLTI--CDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVC 106
TE+L F+G G+D+ I CD+ E IG ++GT+++A S + +
Sbjct: 18 TENLY-FQGAMDGDDMDIPWCDL--NIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH 74
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
R EF + ++ +RHPN+V +G P IV + RG+L + + SG
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS-IVTEYLSRGSLYRLLHK-SGARE 132
Query: 167 KWSIIYRISIG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNP 224
+ R+S+ +A G++YLH + PI+H +LKS N+L+D+ Y V DFGL L
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--- 188
Query: 225 TAGQEMLEASASQG---YKAPELIKMKDASEETDIYSFGVIMLELISGKEPI-NENPT 278
L + + G + APE+++ + ++E++D+YSFGVI+ EL + ++P N NP
Sbjct: 189 -KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 26/288 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
G +G+ +G +YK + + +V+ L + + T K+ F I+++ +H NLV L
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLA---QCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
LGF + G+ L +V+ + G+L C+ G + W + +I+ G A G+++LH
Sbjct: 96 LGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLS--WHMRCKIAQGAANGINFLHE 151
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLE-ASASQGYKAPELIK 246
H IH ++KS NILLD + +SDFGL A M + Y APE ++
Sbjct: 152 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR 208
Query: 247 MKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDM 306
+ + ++DIYSFGV++LE+I+G ++E+ P L + I D M
Sbjct: 209 -GEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 307 LLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
N + + +A C + RP+IK+V L+++
Sbjct: 266 ---------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 26/288 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
G +G+ +G +YK + + +V+ L + + T K+ F I+++ +H NLV L
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLA---QCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
LGF + G+ L +V+ + G+L C+ G + W + +I+ G A G+++LH
Sbjct: 96 LGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLS--WHMRCKIAQGAANGINFLHE 151
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASASQGYKAPELIK 246
H IH ++KS NILLD + +SDFGL A M + Y APE ++
Sbjct: 152 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR 208
Query: 247 MKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDM 306
+ + ++DIYSFGV++LE+I+G ++E+ P L + I D M
Sbjct: 209 -GEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 307 LLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
N + + +A C + RP+IK+V L+++
Sbjct: 266 ---------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 26/288 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
G +G+ +G +YK + + +V+ L + + T K+ F I+++ +H NLV L
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLA---QCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
LGF + G+ L +V+ + G+L C+ G + W + +I+ G A G+++LH
Sbjct: 90 LGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPLS--WHMRCKIAQGAANGINFLHE 145
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASASQGYKAPELIK 246
H IH ++KS NILLD + +SDFGL A M + Y APE ++
Sbjct: 146 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR 202
Query: 247 MKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDM 306
+ + ++DIYSFGV++LE+I+G ++E+ P L + I D M
Sbjct: 203 -GEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIKEEIEDEEKTIEDYIDKKM 259
Query: 307 LLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
N + + +A C + RP+IK+V L+++
Sbjct: 260 ---------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 298
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 111/215 (51%), Gaps = 11/215 (5%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT-PQQLQAFKNEVGVLR 63
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGG 181
RH N++ +G+ P + IV + + +L + + +I I+ A G
Sbjct: 64 KTRHVNILLFMGYSTKP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLI-DIARQTARG 120
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYK 240
+DYLH + IIH +LKS NI L + + DFGL + + +G E S S +
Sbjct: 121 MDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 241 APELIKMKDA---SEETDIYSFGVIMLELISGKEP 272
APE+I+M+D+ S ++D+Y+FG+++ EL++G+ P
Sbjct: 178 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
GEV+GK +G K + +G V +++ L + F ++++ C+ HPN++ +G
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
+ I Y +G + I + WS + IA G+ YLH+ I
Sbjct: 75 VLYKDKRLNFITE--YIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNI 129
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLL-----NPTAGQEMLEASASQGYK-------- 240
IH +L S N L+ N V+DFGL L+ P + + + + Y
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 241 APELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITD 300
APE+I + E+ D++SFG+++ E+I N PD +LP M + D
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIG-----RVNADPD---YLPRTMDFGLNVRGFLD 241
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y P C S FF + + CC P RP+ ++ LE L
Sbjct: 242 RYCPPN--CPPS-------------FFPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 27/223 (12%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 59
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 60 KTRHVNILLFMGYSTAP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 108
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + + +G E
Sbjct: 109 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEP 272
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%), Gaps = 11/217 (5%)
Query: 60 GGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL 119
+D I D G+ IG ++GT+YK +V++L P + + F + + +
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT-PQQLQAFKNEVGV 73
Query: 120 LGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIA 179
L RH N++ +G+ P + IV + + +L + + +I I+ A
Sbjct: 74 LRKTRHVNILLFMGYSTAP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLI-DIARQTA 130
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQG 238
G+DYLH + IIH +LKS NI L + + DFGL + +G E S S
Sbjct: 131 RGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 239 YKAPELIKMKDA---SEETDIYSFGVIMLELISGKEP 272
+ APE+I+M+D+ S ++D+Y+FG+++ EL++G+ P
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 86
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 87 KTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 135
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + + +G E
Sbjct: 136 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 27/234 (11%)
Query: 60 GGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL 119
+D I D G+ IG ++GT+YK +V++L P + + F + + +
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGV 59
Query: 120 LGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYR 173
L RH N++ +G+ P + + Q G S H K+ +I
Sbjct: 60 LRKTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL 108
Query: 174 ISIG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
I I A G+DYLH + IIH +LKS NI L + + DFGL + + +G
Sbjct: 109 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF 165
Query: 232 EA-SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
E S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 166 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 64
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 65 KTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 113
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + + +G E
Sbjct: 114 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 87
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 88 KTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 136
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + + +G E
Sbjct: 137 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 59
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 60 KTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 108
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + + +G E
Sbjct: 109 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 165
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 64
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 65 KTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 113
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + + +G E
Sbjct: 114 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 170
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 74 GEVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
G G+ +G +YK + + +V+ L + + T K+ F I++ +H NLV L
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL 86
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLA---QCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
LGF + G+ L +V+ + G+L C+ G + W +I+ G A G+++LH
Sbjct: 87 LGFSSD--GDDLCLVYVYXPNGSLLDRLSCLDGTPPLS--WHXRCKIAQGAANGINFLHE 142
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS--ASQGYKAPELI 245
H IH ++KS NILLD + +SDFGL A Q + + + Y APE +
Sbjct: 143 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA-QXVXXSRIVGTTAYXAPEAL 198
Query: 246 KMKDASEETDIYSFGVIMLELISGKEPINENPTP 279
+ + + ++DIYSFGV++LE+I+G ++E+ P
Sbjct: 199 R-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 231
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 110/215 (51%), Gaps = 11/215 (5%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT-PQQLQAFKNEVGVLR 75
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGG 181
RH N++ +G+ P + IV + + +L + + +I I+ A G
Sbjct: 76 KTRHVNILLFMGYSTKP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLI-DIARQTARG 132
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYK 240
+DYLH + IIH +LKS NI L + + DFGL + +G E S S +
Sbjct: 133 MDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 241 APELIKMKDA---SEETDIYSFGVIMLELISGKEP 272
APE+I+M+D+ S ++D+Y+FG+++ EL++G+ P
Sbjct: 190 APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 27/232 (11%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 87
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P +L + + Q G S H K+ +I I
Sbjct: 88 KTRHVNILLFMGYSTKP---QLAI--------VTQWCEGSSLYHHLHIIETKFEMIKLID 136
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + +G E
Sbjct: 137 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
+D I D G+ IG ++GT+YK +V++L P + + F + + +L
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGVLR 59
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYRIS 175
RH N++ +G+ P + + Q G S H K+ +I I
Sbjct: 60 KTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID 108
Query: 176 IG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I A G+DYLH + IIH +LKS NI L + + DFGL + +G E
Sbjct: 109 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 165
Query: 234 -SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEP 272
S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 111/234 (47%), Gaps = 27/234 (11%)
Query: 60 GGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL 119
+D I D G+ IG ++GT+YK +V++L P + + F + + +
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP-TPQQLQAFKNEVGV 77
Query: 120 LGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH------KWSIIYR 173
L RH N++ +G+ P + + Q G S H K+ +I
Sbjct: 78 LRKTRHVNILLFMGYSTKP-----------QLAIVTQWCEGSSLYHHLHIIETKFEMIKL 126
Query: 174 ISIG--IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
I I A G+DYLH + IIH +LKS NI L + + DFGL + +G
Sbjct: 127 IDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQF 183
Query: 232 EA-SASQGYKAPELIKMKDA---SEETDIYSFGVIMLELISGKEPINENPTPDE 281
E S S + APE+I+M+D S ++D+Y+FG+++ EL++G+ P + D+
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 108/200 (54%), Gaps = 11/200 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG ++GT+YK +V++L+ + P + + F + + +L RH N++ +G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+ IV + + +L + + + + +I I+ A G+DYLH + IIH
Sbjct: 103 --KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLI-DIARQTAQGMDYLHA---KNIIHR 156
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMKDA---SE 252
++KS NI L + DFGL + + +G + +E + S + APE+I+M+D S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 253 ETDIYSFGVIMLELISGKEP 272
++D+YS+G+++ EL++G+ P
Sbjct: 217 QSDVYSYGIVLYELMTGELP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 150 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 257
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 258 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 151 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 258
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 259 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 148
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 149 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 256
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 257 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 149
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 150 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 257
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 258 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 147
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 148 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 255
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 256 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 168
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 169 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 276
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 277 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 169
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 170 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 277
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 278 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 150
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 151 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 258
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 259 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 145
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 146 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 253
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 254 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ YL
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKYLA 142
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 143 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 250
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 251 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 152 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 259
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 260 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 151
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 152 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 259
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 260 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 148
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 149 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 256
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 257 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 151 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 258
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 259 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 150
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 151 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 258
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 259 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 209
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 210 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 317
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 318 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 132/295 (44%), Gaps = 51/295 (17%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELL--GCI----RHPNL 128
EVIG+ ++G +Y L + ++ ++ + R + G++ + L G I HPN+
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL--NRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDYLH 186
+ LLG G L+V P+ K G+L IR E H ++ I G +A G+ +L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR---NETHNPTVKDLIGFGLQVAKGMKFLA 155
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP---- 242
+ + +H +L ++N +LD + V+DFG L +E G K P
Sbjct: 156 S---KKFVHRDLAARNCMLDEKFTVKVADFG---LARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 243 --ELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDED-FHLPTFMRNAVLDHRIT 299
E ++ + + ++D++SFGV++ EL++ P P PD + F + ++ +
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----PYPDVNTFDITVYLLQG--RRLLQ 263
Query: 300 DLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
Y PD L +++ + C P +RP+ +++ ++ +
Sbjct: 264 PEYCPDPL-------------------YEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 23/231 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVR----LLRFLRPVCTTRDK-EFGDLIELLGCIRHPNLV 129
+VIG +G +YK +L+ S + ++ L+ T + + +F ++G H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHT 187
L G + + +I+ + + G L + +R GE +S++ + + GIA G+ YL
Sbjct: 110 RLEGVISKYK-PMMIITEYMENGALDKFLREKDGE---FSVLQLVGMLRGIAAGMKYLAN 165
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
+ +H +L ++NIL++ N VSDFGL +L +P A + APE I
Sbjct: 166 MNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINE------NPTPDEDFHLPTFM 289
+ + +D++SFG++M E+++ G+ P E ++ F LPT M
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM 273
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 111/230 (48%), Gaps = 26/230 (11%)
Query: 75 EVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
EVIG +G + + L+ G S ++ L+ T R + EF ++G HPN++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G +I+ F + G L +R G+ +++I + + GIA G+ YL
Sbjct: 82 LEGVVTNSM-PVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLRGIASGMRYLAEM 137
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG-----YKAPE 243
+ +H +L ++NIL++ N VSDFGL L + + E S+ G + APE
Sbjct: 138 SY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENS-SDPTETSSLGGKIPIRWTAPE 193
Query: 244 LIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLP 286
I + + +D +S+G++M E++S G+ P + D +D+ LP
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP 243
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%), Gaps = 29/214 (13%)
Query: 75 EVIGKSNYGTLYKAL-LQRSGSVRLLRFLRPVCTTRDKEFGDLIE-------LLGCIRHP 126
E+IG +G +Y+A + +V+ R D++ IE L ++HP
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARH------DPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
N++ L G L++ F + G L + + SG+ I+ ++ IA G++YLH
Sbjct: 67 NIIALRGVCLKEPNLCLVME-FARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLH 122
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQP--------YVSDFGLHLLLNPTAGQEMLEASASQG 238
PIIH +LKS NIL+ + + ++DFGL + T + A+ +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYA 179
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
+ APE+I+ S+ +D++S+GV++ EL++G+ P
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 24/229 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
EVIG +G + + L+ G S ++ L+ T R + EF ++G HPN++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G +I+ F + G L +R G+ +++I + + GIA G+ YL
Sbjct: 80 LEGVVTNSM-PVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLRGIASGMRYLAEM 135
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----YKAPEL 244
+ +H +L ++NIL++ N VSDFGL L + +S + APE
Sbjct: 136 SY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 245 IKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLP 286
I + + +D +S+G++M E++S G+ P + D +D+ LP
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP 241
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 24/230 (10%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVPL 131
VIG +G + L+ G L ++ L+ T + + +F ++G HPN++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-TG 188
G + +IV + + G+L ++ G+ +++I + + GI+ G+ YL G
Sbjct: 89 EGVVTKSK-PVMIVTEYMENGSLDTFLKKNDGQ---FTVIQLVGMLRGISAGMKYLSDMG 144
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELIK 246
+ +H +L ++NIL++ N VSDFGL +L +P A + APE I
Sbjct: 145 Y----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 200
Query: 247 MKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFM 289
+ + +D++S+G++M E++S G+ P E D E + LP+ M
Sbjct: 201 FRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPM 250
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 43/285 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 326 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-- 375
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH NL ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 376 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 435 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 472
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
+ E P E K ++L AC +PS RP+ ++ E +
Sbjct: 473 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 43/285 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 284 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK-- 333
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH NL ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 334 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 393 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 430
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
+ E P E K ++L AC +PS RP+ ++ E +
Sbjct: 431 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 123/285 (43%), Gaps = 43/285 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 287 REPPFY--------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-- 336
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH NL ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 337 -KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 396 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 433
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
+ E P E K ++L AC +PS RP+ ++ E +
Sbjct: 434 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 85 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 194 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 231
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 232 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+I+ F GNL +R + + ++ ++ I+ ++YL + IH
Sbjct: 81 REPPFYIIIE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 136
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L ++N L+ N+ V+DFGL L+ A + APE + S ++D+
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 257 YSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHEN 316
++FGV++ E+ + +P P D ++ +Y LL + E
Sbjct: 197 WAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLEKDYRMER 234
Query: 317 PVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
P E K ++L AC +PS RP+ ++
Sbjct: 235 P--EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 27/249 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
++IG + G + L+ G + ++ L+ T R + +F ++G HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHT 187
L G RG +IV + + G+L +R G+ ++I+ + + G+ G+ YL
Sbjct: 115 LEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLSD 169
Query: 188 -GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPEL 244
G+ +H +L ++N+L+D N VSDFGL +L +P A + APE
Sbjct: 170 LGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 245 IKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFMRNAVLDHR 297
I + S +D++SFGV+M E+++ G+ P D E + LP M H+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQ 285
Query: 298 IT-DLYHPD 305
+ D +H D
Sbjct: 286 LMLDCWHKD 294
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 85 REPPFY--------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 194 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 231
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 232 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 80 REPPFY--------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 128
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 189 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 226
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 227 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 93 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 141
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 202 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 239
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 240 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 84 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 132
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 193 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 230
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 231 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 82 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 130
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 191 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 228
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 229 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 80 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 128
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 189 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 226
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 227 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 80 REPPFY--------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 128
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 189 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 226
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 227 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 85 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 194 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 231
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 232 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 82 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 130
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 191 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 228
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 229 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 85 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 194 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 231
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 232 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 118/249 (47%), Gaps = 27/249 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
++IG + G + L+ G + ++ L+ T R + +F ++G HPN++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHT 187
L G RG +IV + + G+L +R G+ ++I+ + + G+ G+ YL
Sbjct: 115 LEGVVT--RGRLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLSD 169
Query: 188 -GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPEL 244
G+ +H +L ++N+L+D N VSDFGL +L +P A + APE
Sbjct: 170 LGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 245 IKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFMRNAVLDHR 297
I + S +D++SFGV+M E+++ G+ P D E + LP M H+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQ 285
Query: 298 IT-DLYHPD 305
+ D +H D
Sbjct: 286 LMLDCWHKD 294
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+I+ F GNL +R + + ++ ++ I+ ++YL + IH
Sbjct: 80 REPPFYIIIE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHR 135
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L ++N L+ N+ V+DFGL L+ A + APE + S ++D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 257 YSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHEN 316
++FGV++ E+ + +P P D ++ +Y LL + E
Sbjct: 196 WAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLEKDYRMER 233
Query: 317 PVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
P E K ++L AC +PS RP+ ++
Sbjct: 234 P--EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 80 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 128
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 189 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 226
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 227 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+I+ F GNL +R + + ++ ++ I+ ++YL + IH
Sbjct: 80 REPPFYIIIE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHR 135
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L ++N L+ N+ V+DFGL L+ A + APE + S ++D+
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 257 YSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHEN 316
++FGV++ E+ + +P P D ++ +Y LL + E
Sbjct: 196 WAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLEKDYRMER 233
Query: 317 PVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
P E K ++L AC +PS RP+ ++
Sbjct: 234 P--EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 82 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 130
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 191 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 228
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 229 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+I+ F GNL +R + + ++ ++ I+ ++YL + IH
Sbjct: 85 REPPFYIIIE-FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHR 140
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L ++N L+ N+ V+DFGL L+ A + APE + S ++D+
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 257 YSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHEN 316
++FGV++ E+ + +P P D ++ +Y LL + E
Sbjct: 201 WAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLEKDYRMER 238
Query: 317 PVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
P E K ++L AC +PS RP+ ++
Sbjct: 239 P--EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 81 REPPFY--------IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--- 129
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D ++ +Y LL
Sbjct: 190 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------LSQVYE---LLE 227
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 228 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 26/230 (11%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCT----TRDKEFGDLIELLGCIRHPNLVP 130
+VIG +G + L+ G + ++ + + + ++F ++G HPN++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G +I+ F + G+L +R G+ +++I + + GIA G+ YL
Sbjct: 99 LEGVVT-KSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYLADM 154
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL-----NPTAGQEMLEASASQGYKAPE 243
+ +H +L ++NIL++ N VSDFGL L +PT L + APE
Sbjct: 155 NY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY-TSALGGKIPIRWTAPE 210
Query: 244 LIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLP 286
I+ + + +D++S+G++M E++S G+ P + D +D+ LP
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 78 REPPFY--------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D + +Y LL
Sbjct: 187 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------PSQVYE---LLE 224
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 225 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 29/271 (10%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G YG +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+I+ F GNL +R + + ++ ++ I+ ++YL + IH
Sbjct: 78 REPPFYIIIE-FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHR 133
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L ++N L+ N+ V+DFGL L+ A + APE + S ++D+
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 257 YSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHEN 316
++FGV++ E+ + +P P D P+ ++ +L D + E
Sbjct: 194 WAFGVLLWEIAT----YGMSPYPGID---PS---------QVYELLEKDYRM------ER 231
Query: 317 PVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
P E K ++L AC +PS RP+ ++
Sbjct: 232 P--EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFL-------RPVCTTRDKEFGDLIELLGCIRHPNLV 129
IGK +G ++K L + SV ++ L + +EF + ++ + HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH--KWSIIYRISIGIAGGLDYLHT 187
L G P +V F G+L + +AH KWS+ R+ + IA G++Y+
Sbjct: 87 KLYGLMHNP---PRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 188 GFHRPIIHGNLKSKNIL---LDRNYQ--PYVSDFGLHLLLNPTAGQEMLEASASQG---Y 239
+ PI+H +L+S NI LD N V+DFG T+ Q + S G +
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-------TSQQSVHSVSGLLGNFQW 192
Query: 240 KAPELIKMKDAS--EETDIYSFGVIMLELISGKEPINE 275
APE I ++ S E+ D YSF +I+ +++G+ P +E
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 26/230 (11%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCT----TRDKEFGDLIELLGCIRHPNLVP 130
+VIG +G + L+ G + ++ + + + ++F ++G HPN++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G +I+ F + G+L +R G+ +++I + + GIA G+ YL
Sbjct: 73 LEGVVT-KSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIAAGMKYLADM 128
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL-----NPTAGQEMLEASASQGYKAPE 243
+ +H L ++NIL++ N VSDFGL L +PT L + APE
Sbjct: 129 NY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY-TSALGGKIPIRWTAPE 184
Query: 244 LIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLP 286
I+ + + +D++S+G++M E++S G+ P + D +D+ LP
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 33/218 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFL-------RPVCTTRDKEFGDLIELLGCIRHPNLV 129
IGK +G ++K L + SV ++ L + +EF + ++ + HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH--KWSIIYRISIGIAGGLDYLHT 187
L G P +V F G+L + +AH KWS+ R+ + IA G++Y+
Sbjct: 87 KLYGLMHNP---PRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 188 GFHRPIIHGNLKSKNIL---LDRNYQ--PYVSDFGLHLLLNPTAGQEMLEASASQG---Y 239
+ PI+H +L+S NI LD N V+DFGL + Q + S G +
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-------SQQSVHSVSGLLGNFQW 192
Query: 240 KAPELIKMKDAS--EETDIYSFGVIMLELISGKEPINE 275
APE I ++ S E+ D YSF +I+ +++G+ P +E
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G YG +Y + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY IV + GNL +R + E ++ ++ I+ ++YL
Sbjct: 99 LEPPFY--------IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE--- 147
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D + V D LL
Sbjct: 208 FSIKSDVWAFGVLLWEIAT----YGMSPYPGIDL-------SQVYD-----------LLE 245
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
E P E K ++L AC SP+ RP+ +
Sbjct: 246 KGYRMEQP--EGCPPKVYELMRACWKWSPADRPSFAET 281
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 43/278 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG--- 133
+G +G +Y+ + ++ ++ L+ T +EF ++ I+HPNLV LLG
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 134 ----FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
FY I+ F GNL +R + + ++ ++ I+ ++YL
Sbjct: 78 REPPFY--------IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--- 126
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ IH +L ++N L+ N+ V+DFGL L+ A + APE +
Sbjct: 127 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLC 309
S ++D+++FGV++ E+ + +P P D + +Y LL
Sbjct: 187 FSIKSDVWAFGVLLWEIAT----YGMSPYPGID---------------PSQVYE---LLE 224
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ E P E K ++L AC +PS RP+ ++
Sbjct: 225 KDYRMERP--EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 26/231 (11%)
Query: 76 VIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
VIG +G + L+ R +V + + ++F ++G HPN+V L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 132 LGFYAGPRGEK-LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYL-HT 187
G RG+ +IV F + G L +R G+ +++I + + GIA G+ YL
Sbjct: 110 EGVVT--RGKPVMIVIEFMENGALDAFLRKHDGQ---FTVIQLVGMLRGIAAGMRYLADM 164
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL ++ +P A + APE I
Sbjct: 165 GY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFM 289
+ + + +D++S+G++M E++S G+ P + D E + LP M
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPM 271
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPV-CTTRDKEFGDLIE---LLGCIRHPNLVP 130
+VIG +G + L+ G + ++ + DK+ D + ++G HPN++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G + +I+ + + G+L +R G ++++I + + GI G+ YL
Sbjct: 80 LEGVVTKCK-PVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELIK 246
+ +H +L ++NIL++ N VSDFG+ +L +P A + APE I
Sbjct: 136 SY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 247 MKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFMRNAVLDHRI 298
+ + +D++S+G++M E++S G+ P + D E + LP M + H++
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQL 251
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPV-CTTRDKEFGDLIE---LLGCIRHPNLVP 130
+VIG +G + L+ G + ++ + DK+ D + ++G HPN++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G + +I+ + + G+L +R G ++++I + + GI G+ YL
Sbjct: 74 LEGVVTKCK-PVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELIK 246
+ +H +L ++NIL++ N VSDFG+ +L +P A + APE I
Sbjct: 130 SY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 247 MKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFMRNAVLDHRI 298
+ + +D++S+G++M E++S G+ P + D E + LP M + H++
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQL 245
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 112/239 (46%), Gaps = 22/239 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPV-CTTRDKEFGDLIE---LLGCIRHPNLVP 130
+VIG +G + L+ G + ++ + DK+ D + ++G HPN++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G + +I+ + + G+L +R G ++++I + + GI G+ YL
Sbjct: 95 LEGVVTKCK-PVMIITEYMENGSLDAFLRKNDG---RFTVIQLVGMLRGIGSGMKYLS-- 148
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELIK 246
+H +L ++NIL++ N VSDFG+ +L +P A + APE I
Sbjct: 149 -DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 247 MKDASEETDIYSFGVIMLELIS-GKEPINENPTPD------EDFHLPTFMRNAVLDHRI 298
+ + +D++S+G++M E++S G+ P + D E + LP M + H++
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQL 266
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGL 182
+RH NLV LLG +G IV + +G+L +R + + S+ + +
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 183 DYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---- 238
+YL +H +L ++N+L+ + VSDFGL EAS++Q
Sbjct: 116 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL-----------TKEASSTQDTGKL 161
Query: 239 ---YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ APE ++ K S ++D++SFG+++ E+ S G+ P P D
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 16/186 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
I+ L RHP+++ L + P + +V + G L I K S R+
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTP-SDIFMVMEYVSGGELFDYICKNGRLDEKES--RRLFQ 123
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASAS 236
I G+DY H ++H +LK +N+LLD + ++DFGL ++ + G+ + + S
Sbjct: 124 QILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGS 178
Query: 237 QGYKAPELIKMK-DASEETDIYSFGVIMLELISGKEPINENPTP-------DEDFHLPTF 288
Y APE+I + A E DI+S GVI+ L+ G P +++ P D F+ P +
Sbjct: 179 PNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY 238
Query: 289 MRNAVL 294
+ +V+
Sbjct: 239 LNPSVI 244
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 112/233 (48%), Gaps = 36/233 (15%)
Query: 75 EVIGKSNYGTLYKA-LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
EV + +G ++KA LL +V++ P+ + + + L ++H N++ +G
Sbjct: 30 EVKARGRFGCVWKAQLLNEYVAVKIF----PIQDKQSWQNEYEVYSLPGMKHENILQFIG 85
Query: 134 FYAGPRGEKL-----IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
A RG + ++ F+++G+L+ ++ W+ + I+ +A GL YLH
Sbjct: 86 --AEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHED 140
Query: 189 F------HRPII-HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--- 238
H+P I H ++KSKN+LL N ++DFGL L AG+ + G
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE--AGKSAGDTHGQVGTRR 198
Query: 239 YKAPELIK-----MKDASEETDIYSFGVIMLELIS----GKEPINENPTPDED 282
Y APE+++ +DA D+Y+ G+++ EL S P++E P E+
Sbjct: 199 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGL 182
+RH NLV LLG +G IV + +G+L +R + + S+ + +
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 183 DYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP 242
+YL +H +L ++N+L+ + VSDFGL + T L + AP
Sbjct: 131 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAP 183
Query: 243 ELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
E ++ K S ++D++SFG+++ E+ S G+ P P D
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 222
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGL 182
+RH NLV LLG +G IV + +G+L +R + + S+ + +
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 183 DYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP 242
+YL +H +L ++N+L+ + VSDFGL + T L + AP
Sbjct: 303 EYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAP 355
Query: 243 ELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
E ++ K S ++D++SFG+++ E+ S G+ P P D
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 394
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 125/286 (43%), Gaps = 35/286 (12%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVC-TTRDKEFGDLIE---LLGCIRHPNLVPL 131
VIGK ++G +Y R+ ++ + T ++ + L+ + HPN++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
+G P G ++ P+ G+L Q IR +I + +A G++YL +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLI-SFGLQVARGMEYLA---EQ 143
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLH---LLLNPTAGQEMLEASASQGYKAPELIKMK 248
+H +L ++N +LD ++ V+DFGL L + Q+ A + A E ++
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLL 308
+ ++D++SFGV++ EL++ P + P F L F+ R+ P
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDP---FDLTHFLAQG---RRL-----PQPEY 252
Query: 309 CSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
C +S +Q+ C P++RP + ++ ++E +
Sbjct: 253 CPDS-------------LYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 44/280 (15%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
EV+G+ +G + KA R+ V + + + K F + L + HPN+V L G
Sbjct: 15 EVVGRGAFGVVCKAKW-RAKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIRGGS-----GEAHKWSIIYRISIGIAGGLDYLHTGF 189
P +V + + G+L + G AH S + S G+A YLH+
Sbjct: 71 CLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA----YLHSMQ 123
Query: 190 HRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMK 248
+ +IH +LK N+LL + DFG + M S + APE+ +
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEVFEGS 179
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLL 308
+ SE+ D++S+G+I+ E+I+ ++P +E P F + + N I +L P
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMWAVHNGTRPPLIKNLPKP---- 233
Query: 309 CSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
L C S PS RP++++++
Sbjct: 234 -----------------IESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 118/280 (42%), Gaps = 44/280 (15%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
EV+G+ +G + KA R+ V + + + K F + L + HPN+V L G
Sbjct: 14 EVVGRGAFGVVCKAKW-RAKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIRGGS-----GEAHKWSIIYRISIGIAGGLDYLHTGF 189
P +V + + G+L + G AH S + S G+A YLH+
Sbjct: 70 CLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA----YLHSMQ 122
Query: 190 HRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMK 248
+ +IH +LK N+LL + DFG + M S + APE+ +
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ----THMTNNKGSAAWMAPEVFEGS 178
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLL 308
+ SE+ D++S+G+I+ E+I+ ++P +E P F + + N I +L P
Sbjct: 179 NYSEKCDVFSWGIILWEVITRRKPFDEIGGPA--FRIMWAVHNGTRPPLIKNLPKP---- 232
Query: 309 CSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
L C S PS RP++++++
Sbjct: 233 -----------------IESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFL-------RPVCTTRDKEFGDLIELLGCIRHPNLV 129
IGK +G ++K L + SV ++ L + +EF + ++ + HPN+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH--KWSIIYRISIGIAGGLDYLHT 187
L G P +V F G+L + +AH KWS+ R+ + IA G++Y+
Sbjct: 87 KLYGLMHNP---PRMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQN 140
Query: 188 GFHRPIIHGNLKSKNIL---LDRNYQ--PYVSDFGLHLLLNPTAGQEMLEASASQG---Y 239
+ PI+H +L+S NI LD N V+DF L + Q + S G +
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-------SQQSVHSVSGLLGNFQW 192
Query: 240 KAPELIKMKDAS--EETDIYSFGVIMLELISGKEPINE 275
APE I ++ S E+ D YSF +I+ +++G+ P +E
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
GF +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 122/290 (42%), Gaps = 25/290 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-RHPNLVPLLG 133
E++G YG +YK ++G + ++ + V ++E I +L H N+ G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEEEIKQEINMLKKYSHHRNIATYYG 88
Query: 134 FY-----AGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
+ G + +V F G++ I+ G K I I I GL +LH
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH-- 146
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMK 248
+IH ++K +N+LL N + + DFG+ L+ T G+ + + APE+I
Sbjct: 147 -QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVIACD 204
Query: 249 DASEET-----DIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYH 303
+ + T D++S G+ +E+ G P+ + F +P + + + +
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQ 264
Query: 304 PDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
+ C NH + E+++K P +PN +QV +L+D
Sbjct: 265 SFIESCLVKNHSQRPATEQLMKH---------PFIRDQPNERQVRIQLKD 305
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ F G+L + + + HK I + + + I G++YL
Sbjct: 81 GVCYSAGRRNLKLIME-FLPYGSLREYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 135 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 227
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGL 182
+RH NLV LLG +G IV + +G+L +R + + S+ + +
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 183 DYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP 242
+YL +H +L ++N+L+ + VSDFGL + T L + AP
Sbjct: 122 EYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAP 174
Query: 243 ELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
E ++ S ++D++SFG+++ E+ S G+ P P D
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 213
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E IG+ GT+Y A+ +G +R + + + + I ++ ++PN+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 135 YAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
Y G++L +V + G+L + + + + + R + L++LH+ +
Sbjct: 86 YL--VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSN---QV 137
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEE 253
IH ++KS NILL + ++DFG + P + E + + APE++ K +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-EMVGTPYWMAPEVVTRKAYGPK 196
Query: 254 TDIYSFGVIMLELISGKEP-INENP 277
DI+S G++ +E+I G+ P +NENP
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 109 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 164
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 165 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 255
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 256 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + RG + + ++ S + + Y + A L Y H+
Sbjct: 78 LYGYFHDATRVYLILE-YAPRGEVYKELQKLSKFDEQRTATYITEL--ANALSYCHS--- 131
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXLXGTLD--YLPPEMIEGRMH 188
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 126/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 16/215 (7%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
G + AG R KLI+ + G+L ++ + ++ S I G++YL T
Sbjct: 81 GVCYSAGRRNLKLIME-YLPYGSLRDYLQAHAERIDHIKLLQYTS-QICKGMEYLGT--- 135
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPELIKMK 248
+ IH +L ++NIL++ + + DFGL +L ++ + APE +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
S +D++SFGV++ EL + I ++ +P +F
Sbjct: 196 KFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 227
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 39/250 (15%)
Query: 111 KEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI 170
++F ++G HPN++ L G + +IV + + G+L +R + +++
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTV 134
Query: 171 IYRISI--GIAGGLDYLH-TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPT 225
I + + GIA G+ YL G+ +H +L ++NIL++ N VSDFGL +L +P
Sbjct: 135 IQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 190
Query: 226 AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + +PE I + + +D++S+G+++ E++S G+ P E
Sbjct: 191 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE--------- 241
Query: 285 LPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNI 344
+ + D++ + + P + +QL + C + RP
Sbjct: 242 ----------------MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 285
Query: 345 KQVLWKLEDL 354
+Q++ L+ L
Sbjct: 286 EQIVSILDKL 295
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + RG + + ++ S + + Y + A L Y H+
Sbjct: 78 LYGYFHDATRVYLILE-YAPRGEVYKELQKLSKFDEQRTATYITEL--ANALSYCHS--- 131
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 188
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E IG+ GT+Y A+ +G +R + + + + I ++ ++PN+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 135 YAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
Y G++L +V + G+L + + + + + R + L++LH+ +
Sbjct: 87 YL--VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSN---QV 138
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMKDA 250
IH N+KS NILL + ++DFG + P E + S G + APE++ K
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITP----EQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 251 SEETDIYSFGVIMLELISGKEP-INENP 277
+ DI+S G++ +E+I G+ P +NENP
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 79 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH NL ++NIL++ + + DFGL +L ++ + APE
Sbjct: 133 T---KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 39/250 (15%)
Query: 111 KEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI 170
++F ++G HPN++ L G + +IV + + G+L +R + +++
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEYMENGSLDSFLRKHDAQ---FTV 117
Query: 171 IYRISI--GIAGGLDYLH-TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPT 225
I + + GIA G+ YL G+ +H +L ++NIL++ N VSDFGL +L +P
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 226 AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + +PE I + + +D++S+G+++ E++S G+ P E
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE--------- 224
Query: 285 LPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNI 344
+ + D++ + + P + +QL + C + RP
Sbjct: 225 ----------------MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 268
Query: 345 KQVLWKLEDL 354
+Q++ L+ L
Sbjct: 269 EQIVSILDKL 278
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 148
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q A + Y +PEL+ K
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEF---GDLIELLGCIRHPNLVPLL 132
+G ++G ++ + +G ++ L+ R K+ D +L + HP ++ +
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
G + + + ++ + + G L +R + + Y + +A L+YLH+ +
Sbjct: 73 GTFQDAQ-QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--LEYLHS---KD 126
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
II+ +LK +NILLD+N ++DFG + P + + Y APE++ K ++
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYXL---CGTPDYIAPEVVSTKPYNK 182
Query: 253 ETDIYSFGVIMLELISGKEPINENPT 278
D +SFG+++ E+++G P ++ T
Sbjct: 183 SIDWWSFGILIYEMLAGYTPFYDSNT 208
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 83 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 137 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 229
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 81 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 135 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 227
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 37/221 (16%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E+IG +G ++KA + G ++R ++ ++E ++ L + H N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 73
Query: 135 YAG------------------PRGEK----------LIVHPFYKRGNLAQCIRGGSGEAH 166
+ G P K I F +G L Q I GE
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
+ + I G+DY+H+ + +IH +LK NI L Q + DFGL L
Sbjct: 134 DKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELI 267
+ + + Y +PE I +D +E D+Y+ G+I+ EL+
Sbjct: 191 KR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 40/234 (17%)
Query: 63 DLTICDILDAPG----EVIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRD-KEFG 114
D TI +LD +VIG+ N+G + KA +++ G +R+ ++ ++ + D ++F
Sbjct: 12 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFA 70
Query: 115 DLIELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNL--------------AQCIR 159
+E+L + HPN++ LLG RG + + GNL A I
Sbjct: 71 GELEVLCKLGHHPNIINLLGA-CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 129
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH 219
+ + + +A G+DYL + IH NL ++NIL+ NY ++DFGL
Sbjct: 130 NSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGL- 185
Query: 220 LLLNPTAGQEMLEASASQG-----YKAPELIKMKDASEETDIYSFGVIMLELIS 268
+ GQE+ + G + A E + + +D++S+GV++ E++S
Sbjct: 186 -----SRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 85 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 139 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 231
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 84 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 138 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 77 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 131 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 223
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 150
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + + Y +PEL+ K
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
AS+ +D+++ G I+ +L++G P
Sbjct: 210 SASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 76 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 130 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 222
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 82 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 136 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 96 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 150 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 242
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 78 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 132 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 224
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 78 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 132 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 224
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 109 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 163 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 255
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 106/219 (48%), Gaps = 24/219 (10%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 96 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--YKAPEL 244
T + IH +L ++NIL++ + + DFGL +L ++ + APE
Sbjct: 150 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT---YIEKSKSPPAEF 242
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVC--TTRDKE-------FGDLIELLGCIR 124
+V+G +GT++K + G S+++ PVC DK D + +G +
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
H ++V LLG G + +V + G+L +R G A ++ + IA G+ Y
Sbjct: 92 HAHIVRLLGLCPGSSLQ--LVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYY 148
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASASQGYKAPE 243
L ++H NL ++N+LL Q V+DFG+ LL P Q + EA + A E
Sbjct: 149 LE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 205
Query: 244 LIKMKDASEETDIYSFGVIMLELIS-GKEP 272
I + ++D++S+GV + EL++ G EP
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEP 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVC--TTRDKE-------FGDLIELLGCIR 124
+V+G +GT++K + G S+++ PVC DK D + +G +
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
H ++V LLG G + +V + G+L +R G A ++ + IA G+ Y
Sbjct: 74 HAHIVRLLGLCPGSSLQ--LVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYY 130
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASASQGYKAPE 243
L ++H NL ++N+LL Q V+DFG+ LL P Q + EA + A E
Sbjct: 131 LE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE 187
Query: 244 LIKMKDASEETDIYSFGVIMLELIS-GKEP 272
I + ++D++S+GV + EL++ G EP
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEP 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 125/290 (43%), Gaps = 43/290 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLH-T 187
L G + +IV + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLSDM 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELI 245
G+ +H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
+ + +D++S+G+++ E++S G+ P E + +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQ 257
Query: 305 DMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
D++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 258 DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 123/289 (42%), Gaps = 41/289 (14%)
Query: 75 EVIGKSNYGTLYKALLQ----RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+V+G +G + L+ + SV + + ++F ++G HPN++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTG 188
L G + +IV + G+L +R + +++I + + GIA G+ YL
Sbjct: 111 LEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS-- 164
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPTAGQEMLEASASQGYKAPELIK 246
+H +L ++NIL++ N VSDFGL +L +P A + +PE I
Sbjct: 165 -DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 247 MKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPD 305
+ + +D++S+G+++ E++S G+ P E + + D
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWE-------------------------MSNQD 258
Query: 306 MLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLEDL 354
++ + + P + +QL + C + RP +Q++ L+ L
Sbjct: 259 VIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-RHPNLVP 130
A G+VI +G + K R+ +V++L+ + + +++L I H N+V
Sbjct: 39 AFGQVIEADAFG-IDKTATXRTVAVKMLK--EGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYR----------ISIGIAG 180
LLG P G +++ F K GNL+ +R E + +Y+ S +A
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAK 155
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASASQG 238
G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 156 GMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-DARLPLK 211
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFMRNA 292
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGTRMR 267
Query: 293 VLDHRITDLYHPDMLLC 309
D+ ++Y ML C
Sbjct: 268 APDYTTPEMYQ-TMLDC 283
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-RHPNLVP 130
A G+VI +G + K R+ +V++L+ + + +++L I H N+V
Sbjct: 39 AFGQVIEADAFG-IDKTATXRTVAVKMLK--EGATHSEHRALMSELKILIHIGHHLNVVN 95
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYR----------ISIGIAG 180
LLG P G +++ F K GNL+ +R E + +Y+ S +A
Sbjct: 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAK 155
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASASQG 238
G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 156 GMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKG-DARLPLK 211
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFMRNA 292
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFXRRLKEGTRMR 267
Query: 293 VLDHRITDLYHPDMLLC 309
D+ ++Y ML C
Sbjct: 268 APDYTTPEMYQ-TMLDC 283
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E IG+ GT+Y A+ +G +R + + + + I ++ ++PN+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 135 YAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
Y G++L +V + G+L + + + + + R + L++LH+ +
Sbjct: 86 YL--VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSN---QV 137
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMKDA 250
IH ++KS NILL + ++DFG + P E + S G + APE++ K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITP----EQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 251 SEETDIYSFGVIMLELISGKEP-INENP 277
+ DI+S G++ +E+I G+ P +NENP
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 94 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 147
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + + Y +PEL+ K
Sbjct: 148 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 111/250 (44%), Gaps = 39/250 (15%)
Query: 111 KEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI 170
++F ++G HPN++ L G + +IV + G+L +R + +++
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSK-PVMIVTEXMENGSLDSFLRKHDAQ---FTV 117
Query: 171 IYRISI--GIAGGLDYLH-TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL--NPT 225
I + + GIA G+ YL G+ +H +L ++NIL++ N VSDFGL +L +P
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPE 173
Query: 226 AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + +PE I + + +D++S+G+++ E++S G+ P E
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE--------- 224
Query: 285 LPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNI 344
+ + D++ + + P + +QL + C + RP
Sbjct: 225 ----------------MSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKF 268
Query: 345 KQVLWKLEDL 354
+Q++ L+ L
Sbjct: 269 EQIVSILDKL 278
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E IG+ GT+Y A+ +G +R + + + + I ++ ++PN+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 135 YAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
Y G++L +V + G+L + + + + + R + L++LH+ +
Sbjct: 86 YL--VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSN---QV 137
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEE 253
IH ++KS NILL + ++DFG + P + + + APE++ K +
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPK 196
Query: 254 TDIYSFGVIMLELISGKEP-INENP 277
DI+S G++ +E+I G+ P +NENP
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 98 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 151
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + + Y +PEL+ K
Sbjct: 152 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E IG+ GT+Y A+ +G +R + + + + I ++ ++PN+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 135 YAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
Y G++L +V + G+L + + + + + R + L++LH+ +
Sbjct: 87 YL--VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQ---ALEFLHSN---QV 138
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEE 253
IH ++KS NILL + ++DFG + P + + + APE++ K +
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS-XMVGTPYWMAPEVVTRKAYGPK 197
Query: 254 TDIYSFGVIMLELISGKEP-INENP 277
DI+S G++ +E+I G+ P +NENP
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 72 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 125
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 126 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 184
Query: 249 DASEETDIYSFGVIMLELISGKEPIN 274
A + +D+++ G I+ +L++G P
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPFR 210
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 73 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 126
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 127 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 185
Query: 249 DASEETDIYSFGVIMLELISGKEPIN 274
A + +D+++ G I+ +L++G P
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPFR 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 75 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 128
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 129 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 187
Query: 249 DASEETDIYSFGVIMLELISGKEPIN 274
A + +D+++ G I+ +L++G P
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPFR 213
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 79 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 132
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 133 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 74 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 127
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 128 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 186
Query: 249 DASEETDIYSFGVIMLELISGKEPIN 274
A + +D+++ G I+ +L++G P
Sbjct: 187 SACKSSDLWALGCIIYQLVAGLPPFR 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A + S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDSTRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KKVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAAL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N D +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARD 235
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 38/188 (20%)
Query: 123 IRHPNLVPLLGFYAGPRGEKL-----IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
++H NL+ + A RG L ++ F+ +G+L ++G W+ + ++
Sbjct: 66 MKHENLLQFIA--AEKRGSNLEVELWLITAFHDKGSLTDYLKGN---IITWNELCHVAET 120
Query: 178 IAGGLDYLHTGF-------HRP-IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNP----- 224
++ GL YLH H+P I H + KSKN+LL + ++DFGL + P
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 225 -TAGQEMLEASASQGYKAPELIK-----MKDASEETDIYSFGVIMLELIS----GKEPIN 274
T GQ ++ Y APE+++ +DA D+Y+ G+++ EL+S P++
Sbjct: 181 DTHGQ-----VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVD 235
Query: 275 ENPTPDED 282
E P E+
Sbjct: 236 EYMLPFEE 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 20/187 (10%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQ--CIRGGSGEAHKWSIIYRI 174
I+ L RHP+++ L + P + +V + G L C G E R+
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEA----RRL 116
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS 234
I +DY H ++H +LK +N+LLD + ++DFGL ++ + G+ + ++
Sbjct: 117 FQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDSC 171
Query: 235 ASQGYKAPELIKMK-DASEETDIYSFGVIMLELISGKEPINENPTPD-------EDFHLP 286
S Y APE+I + A E DI+S GVI+ L+ G P ++ P F++P
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP 231
Query: 287 TFMRNAV 293
++ +V
Sbjct: 232 EYLNRSV 238
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 74 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 127
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ ++ L + Y PE+I+ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDTL--CGTLDYLPPEMIEGRMH 184
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 137/312 (43%), Gaps = 56/312 (17%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E +GK YG +++ L S +V++ R+ E + + L RH N+ LG
Sbjct: 14 ECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLL----RHDNI---LG 66
Query: 134 FYAGPRGEK-------LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
F A + LI H +++ G+L ++ + E H + R+++ A GL +LH
Sbjct: 67 FIASDMTSRNSSTQLWLITH-YHEHGSLYDFLQRQTLEPH---LALRLAVSAACGLAHLH 122
Query: 187 -----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS-----AS 236
T I H + KS+N+L+ N Q ++D GL ++ + G + L+ +
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVM--HSQGSDYLDIGNNPRVGT 180
Query: 237 QGYKAPELIKMK------DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMR 290
+ Y APE++ + ++ + TDI++FG+++ E I+ + +N ED+ P +
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE-IARRTIVN---GIVEDYRPPFY-- 234
Query: 291 NAVLDHRITDLYHPDMLLCSNSNHENPVSEERILK------FFQLAMACCSPSPSLRPN- 343
D D DM + + P R+ Q+ C P+PS R
Sbjct: 235 ----DVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTA 290
Query: 344 --IKQVLWKLED 353
IK+ L K+ +
Sbjct: 291 LRIKKTLQKISN 302
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G V ++ L+ ++F IE+L ++H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 133 G--FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLH 186
G + AG R KLI+ + G+L + + HK I + + + I G++YL
Sbjct: 78 GVCYSAGRRNLKLIME-YLPYGSLRDYL-----QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPE 243
T + IH +L ++NIL++ + + DFGL +L P + + + APE
Sbjct: 132 T---KRYIHRDLATRNILVENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPE 187
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ S +D++SFGV++ EL + I ++ +P +F
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFTY---IEKSKSPPAEF 224
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 94 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 147
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 148 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 150
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 102 L--YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 155
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 156 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 214
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 215 SACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 148
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 74 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 127
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG P++ + L S + Y PE+I+ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCH-APSSRRTTL--SGTLDYLPPEMIEGRMH 184
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 95 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 148
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 149 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 208 SACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 150
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 40/234 (17%)
Query: 63 DLTICDILDAPG----EVIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRD-KEFG 114
D TI +LD +VIG+ N+G + KA +++ G +R+ ++ ++ + D ++F
Sbjct: 5 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFA 63
Query: 115 DLIELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNL--------------AQCIR 159
+E+L + HPN++ LLG RG + + GNL A I
Sbjct: 64 GELEVLCKLGHHPNIINLLGA-CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 122
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH 219
+ + + +A G+DYL + IH +L ++NIL+ NY ++DFGL
Sbjct: 123 NSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGL- 178
Query: 220 LLLNPTAGQEMLEASASQG-----YKAPELIKMKDASEETDIYSFGVIMLELIS 268
+ GQE+ + G + A E + + +D++S+GV++ E++S
Sbjct: 179 -----SRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 150
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 98 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 151
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 152 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 211 SACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 150
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 210 SACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E+IG +G ++KA + G +++ ++ ++E ++ L + H N+V G
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 72
Query: 135 YAG------------PRGEK---LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIA 179
+ G R + I F +G L Q I GE + + I
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGY 239
G+DY+H+ + +I+ +LK NI L Q + DFGL L + + + Y
Sbjct: 133 KGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX--RSKGTLRY 187
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELI 267
+PE I +D +E D+Y+ G+I+ EL+
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 32/218 (14%)
Query: 75 EVIGKSNYGTLYK-ALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL- 132
E+IG+ YG +YK +L +R +V++ F +K I + + H N+ +
Sbjct: 19 ELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKN----IYRVPLMEHDNIARFIV 74
Query: 133 ---GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
A R E L+V +Y G+L + + S W R++ + GL YLHT
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 190 HR------PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA----GQEMLEASASQG- 238
R I H +L S+N+L+ + +SDFGL + L G+E A + G
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 239 --YKAPEL----IKMKD---ASEETDIYSFGVIMLELI 267
Y APE+ + ++D A ++ D+Y+ G+I E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 110/234 (47%), Gaps = 40/234 (17%)
Query: 63 DLTICDILDAPG----EVIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRD-KEFG 114
D TI +LD +VIG+ N+G + KA +++ G +R+ ++ ++ + D ++F
Sbjct: 15 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDG-LRMDAAIKRMKEYASKDDHRDFA 73
Query: 115 DLIELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNL--------------AQCIR 159
+E+L + HPN++ LLG RG + + GNL A I
Sbjct: 74 GELEVLCKLGHHPNIINLLGA-CEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIA 132
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH 219
+ + + +A G+DYL + IH +L ++NIL+ NY ++DFGL
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGL- 188
Query: 220 LLLNPTAGQEMLEASASQG-----YKAPELIKMKDASEETDIYSFGVIMLELIS 268
+ GQE+ + G + A E + + +D++S+GV++ E++S
Sbjct: 189 -----SRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 97 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 150
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 151 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 210 SAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 104/232 (44%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + + E+ + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL---CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 74 GEVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
G+++G+ ++ T+ A R ++++L + + +++ + HP V
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 131 LLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L ++ EKL Y K G L + IR + Y + I L+YLH
Sbjct: 100 L--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TAEIVSALEYLHG-- 153
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SASQGYKAPELIKMK 248
+ IIH +LK +NILL+ + ++DFG +L+P + Q + Y +PEL+ K
Sbjct: 154 -KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
A + +D+++ G I+ +L++G P
Sbjct: 213 SACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 89
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 90 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 143
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTTL--CGTLDYLPPEMIEGRMH 200
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 252
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +VR++ + ++ K F + + ++ + HPN+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H F
Sbjct: 79 FEVIETEKTLYLVME--YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ E S Y APEL + K
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 76 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 129
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 186
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 87/187 (46%), Gaps = 20/187 (10%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQ--CIRGGSGEAHKWSIIYRI 174
I+ L RHP+++ L + P + +V + G L C G E R+
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPT-DFFMVMEYVSGGELFDYICKHGRVEEMEA----RRL 116
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS 234
I +DY H ++H +LK +N+LLD + ++DFGL ++ + G+ + +
Sbjct: 117 FQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTSC 171
Query: 235 ASQGYKAPELIKMK-DASEETDIYSFGVIMLELISGKEPINENPTPD-------EDFHLP 286
S Y APE+I + A E DI+S GVI+ L+ G P ++ P F++P
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP 231
Query: 287 TFMRNAV 293
++ +V
Sbjct: 232 EYLNRSV 238
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 75 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 128
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXL--CGTLDYLPPEMIEGRMH 185
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 237
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 99 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 152
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTTL--CGTLDYLPPEMIEGRMH 209
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 98
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 99 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 152
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ ++ L + Y PE+I+ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRDDL--CGTLDYLPPEMIEGRMH 209
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 261
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 118 ELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFY-KRGNLAQCIRGGSGEAHKWSIIYRISI 176
+++ + HP V L ++ EKL Y K G L + IR + Y +
Sbjct: 82 DVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY--TA 137
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA-SA 235
I L+YLH + IIH +LK +NILL+ + ++DFG +L+P + Q
Sbjct: 138 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
+ Y +PEL+ K A + +D+++ G I+ +L++G P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 78 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 131
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 188
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 76 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 129
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 186
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 76 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 129
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAAL--CGTLDYLPPEMIEGRMH 186
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 76 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 129
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ ++ L + Y PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRDDL--CGTLDYLPPEMIEGRMH 186
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 71
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 72 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 125
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 182
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTXL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAAL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
HP+++ L+ Y +V ++G L + + K + I + + +
Sbjct: 159 HPHIITLIDSYESS-SFMFLVFDLMRKGELFDYLTEKVALSEKET--RSIMRSLLEAVSF 215
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
LH I+H +LK +NILLD N Q +SDFG L P G+++ E + GY APE+
Sbjct: 216 LHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP--GEKLRELCGTPGYLAPEI 270
Query: 245 IK--MKDA----SEETDIYSFGVIMLELISGKEPI 273
+K M + +E D+++ GVI+ L++G P
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 76 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 129
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRXXL--CGTLDYLPPEMIEGRMH 186
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLR--PVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG + + + R ++ +R V T+ + + + + +L + HPN++ L F
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
+ R L++ YK G L I R E II ++ G+ YLH
Sbjct: 105 FEDKRNYYLVMEC-YKGGELFDEIIHRMKFNEVDAAVIIKQV----LSGVTYLH---KHN 156
Query: 193 IIHGNLKSKNILLDRNYQPY---VSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK +N+LL+ + + DFGL + ++M E + Y APE+++ K
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ--KKMKERLGTAYYIAPEVLR-KK 213
Query: 250 ASEETDIYSFGVIMLELISGKEP 272
E+ D++S GVI+ L++G P
Sbjct: 214 YDEKCDVWSIGVILFILLAGYPP 236
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 78 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 131
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEXIEGRXH 188
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 77 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 130
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 187
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 239
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 119/280 (42%), Gaps = 37/280 (13%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 23 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 76
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + +S IA G+ Y+ + +
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEET 254
H +L++ NIL+ N V+DFGL L+ A + APE + ++
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 255 DIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSN 313
D++SFG+++ EL + G+ P P + VLD P C S
Sbjct: 194 DVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPPECPESL 241
Query: 314 HENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
H+ L C P RP + + LED
Sbjct: 242 HD-------------LMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 31/258 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 41 AFGQVIEADAFG-IDKTATXRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 98
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE--AHKWSIIYR----------ISIGIA 179
LG P G +++ F K GNL+ +R E +K +Y+ S +A
Sbjct: 99 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVA 158
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASASQ 237
G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 159 KGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG-DARLPL 214
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFMRN 291
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L R
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 292 AVLDHRITDLYHPDMLLC 309
D+ ++Y ML C
Sbjct: 271 RAPDYTTPEMYQ-TMLDC 287
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 23 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 76
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + +S IA G+ Y+ + +
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---V 133
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 187
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 235
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 236 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTTR----DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK + G +V++ ++ + T + EF D ++ + HP+LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
LLG P + +V G L + + ++ + IA G+ YL
Sbjct: 81 RLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCVQIAKGMMYLE--- 134
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG-----YKAPEL 244
R ++H +L ++N+L+ ++DFGL LL G E E +A G + A E
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE---GDEK-EYNADGGKMPIKWMALEC 190
Query: 245 IKMKDASEETDIYSFGVIMLELIS-GKEPINENPT 278
I + + ++D++S+GV + EL++ G +P + PT
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEF--GDLIELLGCIRHPNLVPL 131
E +G+ ++G + A ++ L+F+ R + D I L +RHP+++ L
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL 74
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCI----RGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
P +++ Y G L I R E R I ++Y H
Sbjct: 75 YDVITTPTDIVMVIE--YAGGELFDYIVEKKRMTEDEGR------RFFQQIICAIEYCH- 125
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
I+H +LK +N+LLD N ++DFGL ++ T G + + S Y APE+I
Sbjct: 126 --RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVING 181
Query: 248 K-DASEETDIYSFGVIMLELISGKEPINENPTPD 280
K A E D++S G+++ ++ G+ P ++ P+
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN 215
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 73
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 74 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 127
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDL--CGTLDYLPPEMIEGRMH 184
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR------- 173
H N+V LLG P G +++ F K GNL+ +R E + + +Y+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 ---ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQ 228
S +A G+++L + R IH +L ++NILL + DFGL + +P +
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF- 283
+ +A + APE I + + ++D++SFGV++ E+ S + +P P DE+F
Sbjct: 198 KG-DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFC 252
Query: 284 -HLPTFMRNAVLDHRITDLYHPDMLLC 309
L R D+ ++Y ML C
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQ-TMLDC 278
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 77
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 78 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 131
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDL--CGTLDYLPPEMIEGRMH 188
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 72
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 73 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTDL--CGTLDYLPPEMIEGRMH 183
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 16 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 69
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + ++ IA G+ Y+ + +
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---V 126
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDN------EXTARQGAKFPIKWTAPEAALYG 180
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 228
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 229 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 86 YKALLQRSGSVRLLRFLRPVC--TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG--- 140
Y A+L+R+ +++ L RP T + + +L+ L+ + H N++ LL + +
Sbjct: 44 YDAILERNVAIKKLS--RPFQNQTHAKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 141 -EKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLK 199
+ + + NL+Q I+ ++Y++ +GI +LH+ IIH +LK
Sbjct: 101 FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK----HLHSA---GIIHRDLK 153
Query: 200 SKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIY 257
NI++ + + DFGL TAG M ++ Y+APE+I E DI+
Sbjct: 154 PSNIVVKSDATLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 258 SFGVIMLELISG 269
S GVIM E+I G
Sbjct: 210 SVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 22/192 (11%)
Query: 86 YKALLQRSGSVRLLRFLRPVC--TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG--- 140
Y A+L+R+ +++ L RP T + + +L+ L+ + H N++ LL + +
Sbjct: 44 YDAILERNVAIKKLS--RPFQNQTHAKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 141 -EKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLK 199
+ + + NL+Q I+ ++Y++ +GI +LH+ IIH +LK
Sbjct: 101 FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK----HLHSA---GIIHRDLK 153
Query: 200 SKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIY 257
NI++ + + DFGL TAG M ++ Y+APE+I E DI+
Sbjct: 154 PSNIVVKSDATLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 258 SFGVIMLELISG 269
S GVIM E+I G
Sbjct: 210 SVGVIMGEMIKG 221
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR------- 173
H N+V LLG P G +++ F K GNL+ +R E + + +Y+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 ---ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQ 228
S +A G+++L + R IH +L ++NILL + DFGL + +P +
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF- 283
+ +A + APE I + + ++D++SFGV++ E+ S + +P P DE+F
Sbjct: 198 KG-DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFC 252
Query: 284 -HLPTFMRNAVLDHRITDLYHPDMLLC 309
L R D+ ++Y ML C
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQ-TMLDC 278
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 107/232 (46%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 77 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCHS--- 130
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL N + ++DFG + P++ ++ L + Y PE+I+ +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVH-APSSRRDTL--CGTLDYLPPEMIEGRMH 187
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + G P + + +F P F+ D
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARD 239
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTTR----DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK + G +V++ ++ + T + EF D ++ + HP+LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
LLG P + +V G L + + ++ + IA G+ YL
Sbjct: 104 RLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCVQIAKGMMYLE--- 157
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG-----YKAPEL 244
R ++H +L ++N+L+ ++DFGL LL G E E +A G + A E
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE---GDEK-EYNADGGKMPIKWMALEC 213
Query: 245 IKMKDASEETDIYSFGVIMLELIS-GKEPINENPT 278
I + + ++D++S+GV + EL++ G +P + PT
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT 248
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 39 AFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 96
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR----------ISIG 177
LG P G +++ F K GNL+ +R E + + +Y+ S
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASA 235
+A G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 157 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG-DARL 212
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFM 289
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGT 268
Query: 290 RNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 269 RMRAPDYTTPEMYQ-TMLDC 287
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 16/206 (7%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
EV+G + ++ + +G + L+ ++ RD + I +L I+H N+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y L++ G L I RG E +I ++ + YLH
Sbjct: 75 YESTTHYYLVMQ-LVSGGELFDRILERGVYTEKDASLVIQQV----LSAVKYLH---ENG 126
Query: 193 IIHGNLKSKNILL---DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK +N+L + N + ++DFGL + M A + GY APE++ K
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 250 ASEETDIYSFGVIMLELISGKEPINE 275
S+ D +S GVI L+ G P E
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYE 209
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 39 AFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 96
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR----------ISIG 177
LG P G +++ F K GNL+ +R E + + +Y+ S
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASA 235
+A G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 157 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG-DARL 212
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFM 289
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGT 268
Query: 290 RNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 269 RMRAPDYTTPEMYQ-TMLDC 287
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 46 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 104
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 105 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 157
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M+ ++ Y+APE+I E DI+S
Sbjct: 158 NIVVKSDCTLKILDFGLAR----TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSV 213
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 214 GCIMGEMIKG 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL+Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDATLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR------- 173
H N+V LLG P G +++ F K GNL+ +R E + + +Y+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 ---ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQ 228
S +A G+++L + R IH +L ++NILL + DFGL + +P +
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 197
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF- 283
+ +A + APE I + + ++D++SFGV++ E+ S + +P P DE+F
Sbjct: 198 KG-DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFC 252
Query: 284 -HLPTFMRNAVLDHRITDLYHPDMLLC 309
L R D+ ++Y ML C
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQ-TMLDC 278
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR------- 173
H N+V LLG P G +++ F K GNL+ +R E + + +Y+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 174 ---ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQ 228
S +A G+++L + R IH +L ++NILL + DFGL + +P +
Sbjct: 141 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF- 283
+ +A + APE I + + ++D++SFGV++ E+ S + +P P DE+F
Sbjct: 198 KG-DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFC 252
Query: 284 -HLPTFMRNAVLDHRITDLYHPDMLLC 309
L R D+ ++Y ML C
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQ-TMLDC 278
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL+Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR---HPNLVPLLG 133
+G YG + + +G+ R ++ ++ T G L++ + ++ HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
F+ R L++ Y+ G L I R E I+ ++ G YLH
Sbjct: 72 FFEDKRNYYLVME-VYRGGELFDEIILRQKFSEVDAAVIMKQV----LSGTTYLH---KH 123
Query: 192 PIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMK 248
I+H +LK +N+LL+ R+ + DFGL G +M E + Y APE+++ K
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE--VGGKMKERLGTAYYIAPEVLR-K 180
Query: 249 DASEETDIYSFGVIMLELISGKEP 272
E+ D++S GVI+ L+ G P
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPP 204
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E +GK YG +++ Q + +V++ R+ E + + L RH N+ LG
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENI---LG 66
Query: 134 FYAGPRGEK-------LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
F A + LI H +++ G+L ++ + + RI + IA GL +LH
Sbjct: 67 FIASDMTSRHSSTQLWLITH-YHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLH 122
Query: 187 -----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--- 238
T I H +LKSKNIL+ +N Q ++D GL ++ + + Q + + G
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 239 YKAPEL------IKMKDASEETDIYSFGVIMLEL 266
Y APE+ + D+ + DI++FG+++ E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGLAR----TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 104/219 (47%), Gaps = 28/219 (12%)
Query: 68 DILDAPGEVI------GKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLG 121
D+ + P E + G +G ++ + V + + L+P T + F + +++
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAI-KTLKP-GTMSPESFLEEAQIMK 59
Query: 122 CIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
++H LV L YA E + IV + +G+L ++ G G A K + ++ +A
Sbjct: 60 KLKHDKLVQL---YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
G+ Y+ + IH +L+S NIL+ ++DFGL L+ E +A QG K
Sbjct: 117 GMAYIERMNY---IHRDLRSANILVGNGLICKIADFGLARLIEDN------EXTARQGAK 167
Query: 241 ------APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
APE + ++D++SFG+++ EL++ G+ P
Sbjct: 168 FPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 75
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 76 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 129
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + +++FG + P++ + L + Y PE+I+ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 186
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 238
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E +GK YG +++ Q + +V++ R+ E + + L RH N+ LG
Sbjct: 14 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENI---LG 66
Query: 134 FYAGPRGEK-------LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
F A + LI H +++ G+L ++ + + RI + IA GL +LH
Sbjct: 67 FIASDMTSRHSSTQLWLITH-YHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLH 122
Query: 187 -----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--- 238
T I H +LKSKNIL+ +N Q ++D GL ++ + + Q + + G
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 182
Query: 239 YKAPEL------IKMKDASEETDIYSFGVIMLEL 266
Y APE+ + D+ + DI++FG+++ E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 119/260 (45%), Gaps = 33/260 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 39 AFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 96
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR----------ISIG 177
LG P G +++ F K GNL+ +R E + + +Y+ S
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASA 235
+A G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 157 VAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-DARL 212
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFM 289
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGT 268
Query: 290 RNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 269 RMRAPDYTTPEMYQ-TMLDC 287
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 19 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 72
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + ++ IA G+ Y+ + +
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---V 129
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 183
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 231
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 232 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 74
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 75 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 128
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + +++FG + P++ + L + Y PE+I+ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 185
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 237
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 45 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 103
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 156
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 157 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 212
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 213 GCIMGEMIKG 222
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ IRH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 105/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++ + L+ L + + + +E+ +RHPN++
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILR 69
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 70 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSYCHS--- 123
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 180
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + GK P N + +F P F+ D
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 232
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +VR++ + ++ K F + + ++ + HPN+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H F
Sbjct: 79 FEVIETEKTLYLVME--YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ S Y APEL + K
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 58 FRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEFGDL 116
++ ED I DI D +V+G + + A +R+ + ++ + + ++ +
Sbjct: 10 WKQAED--IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENE 66
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRI 174
I +L I+HPN+V L Y G ++ G L I +G E +I+++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESG-GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNIL---LDRNYQPYVSDFGLHLLLNPTAGQEML 231
+ YLH I+H +LK +N+L LD + + +SDFGL + +P G +
Sbjct: 126 ----LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLS 176
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI-NEN 276
A + GY APE++ K S+ D +S GVI L+ G P +EN
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 33/214 (15%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E +GK YG +++ Q + +V++ R+ E + + L RH N+ LG
Sbjct: 43 ECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVML----RHENI---LG 95
Query: 134 FYAGPRGEK-------LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
F A + LI H +++ G+L ++ + + RI + IA GL +LH
Sbjct: 96 FIASDMTSRHSSTQLWLITH-YHEMGSLYDYLQLTTLDTVS---CLRIVLSIASGLAHLH 151
Query: 187 -----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--- 238
T I H +LKSKNIL+ +N Q ++D GL ++ + + Q + + G
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKR 211
Query: 239 YKAPEL------IKMKDASEETDIYSFGVIMLEL 266
Y APE+ + D+ + DI++FG+++ E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 58 FRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEFGDL 116
++ ED I DI D +V+G + + A +R+ + ++ + + ++ +
Sbjct: 10 WKQAED--IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRI 174
I +L I+HPN+V L Y G ++ G L I +G E +I+++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESG-GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNIL---LDRNYQPYVSDFGLHLLLNPTAGQEML 231
+ YLH I+H +LK +N+L LD + + +SDFGL + +P G +
Sbjct: 126 ----LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLS 176
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI-NEN 276
A + GY APE++ K S+ D +S GVI L+ G P +EN
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 58 FRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEFGDL 116
++ ED I DI D +V+G + + A +R+ + ++ + + ++ +
Sbjct: 10 WKQAED--IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRI 174
I +L I+HPN+V L Y G ++ G L I +G E +I+++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESG-GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNIL---LDRNYQPYVSDFGLHLLLNPTAGQEML 231
+ YLH I+H +LK +N+L LD + + +SDFGL + +P G +
Sbjct: 126 ----LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLS 176
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI-NEN 276
A + GY APE++ K S+ D +S GVI L+ G P +EN
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYR------- 173
H N+V LLG P G +++ F K GNL+ +R E + + +Y+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 174 ---ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQ 228
S +A G+++L + R IH +L ++NILL + DFGL + +P +
Sbjct: 187 LICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 243
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF- 283
+ +A + APE I + + ++D++SFGV++ E+ S + +P P DE+F
Sbjct: 244 KG-DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFC 298
Query: 284 -HLPTFMRNAVLDHRITDLYHPDMLLC 309
L R D+ ++Y ML C
Sbjct: 299 RRLKEGTRMRAPDYTTPEMYQ-TMLDC 324
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
IG YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 148
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 149 A---DIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 58 FRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEFGDL 116
++ ED I DI D +V+G + + A +R+ + ++ + + ++ +
Sbjct: 10 WKQAED--IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENE 66
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRI 174
I +L I+HPN+V L Y G ++ G L I +G E +I+++
Sbjct: 67 IAVLHKIKHPNIVALDDIYESG-GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNIL---LDRNYQPYVSDFGLHLLLNPTAGQEML 231
+ YLH I+H +LK +N+L LD + + +SDFGL + +P G +
Sbjct: 126 ----LDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLS 176
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI-NEN 276
A + GY APE++ K S+ D +S GVI L+ G P +EN
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 275 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 328
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + ++ IA G+ Y+ +
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 385
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E E +A QG K APE
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLI------EDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 487
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 488 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 192 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 245
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + ++ IA G+ Y+ +
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E E +A QG K APE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI------EDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 404
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 405 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 32/259 (12%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 40 AFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 97
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI---IYR----------ISIGI 178
LG P G +++ F K GNL+ +R E + +Y+ S +
Sbjct: 98 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQV 157
Query: 179 AGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEASAS 236
A G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 158 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG-DARLP 213
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPTFMR 290
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L R
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKEGTR 269
Query: 291 NAVLDHRITDLYHPDMLLC 309
D+ ++Y ML C
Sbjct: 270 MRAPDYTTPEMYQ-TMLDC 287
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 192 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 245
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + ++ IA G+ Y+ +
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E E +A QG K APE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI------EDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 404
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 405 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 150
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTADEMTGYVATRWYRAPEIMLN 203
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 123/286 (43%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 192 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 245
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G +G+ + + ++ IA G+ Y+ +
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 302
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E E +A QG K APE
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLI------EDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 404
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 405 ECPESLHD-------------LMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 150
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTADEMTGYVATRWYRAPEIMLN 203
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L R +V+++ + T+ K F + + ++ + HPN+V L
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFRE-VRIMKILNHPNIVKL 79
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H +
Sbjct: 80 FEVIETEKTLYLVME--YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY 134
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ S Y APEL + K
Sbjct: 135 ---IVHRDLKAENLLLDGDMNIKIADFGFSNEF--TVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 106/232 (45%), Gaps = 19/232 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR---DKEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L + + + +E+ +RHPN++
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILR 76
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L G++ LI+ + G + + ++ S + + Y + A L Y H+
Sbjct: 77 LYGYFHDATRVYLILE-YAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCHS--- 130
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL N + ++DFG + P++ + L + Y PE+I+ +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVH-APSSRRTTL--CGTLDYLPPEMIEGRMH 187
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE-------DFHLPTFMRNAVLD 295
E+ D++S GV+ E + G P + + +F P F+ D
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARD 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 148
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 149 A---DIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 19/204 (9%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR---HPNLVPLLG 133
+G YG + + +G+ R ++ ++ T G L++ + ++ HPN++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
F+ R L++ Y+ G L I R E I+ ++ G YLH
Sbjct: 89 FFEDKRNYYLVME-VYRGGELFDEIILRQKFSEVDAAVIMKQV----LSGTTYLH---KH 140
Query: 192 PIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMK 248
I+H +LK +N+LL+ R+ + DFGL G +M E + Y APE+++ K
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE--VGGKMKERLGTAYYIAPEVLR-K 197
Query: 249 DASEETDIYSFGVIMLELISGKEP 272
E+ D++S GVI+ L+ G P
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 150
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTADEMTGYVATRWYRAPEIMLN 203
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 149
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAK--LTDDHVQFLIYQI----LRGLKYIHS 139
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 163
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 164 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMXGXVATRWYRAPEIMLN 216
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGXVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 149
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 150 A---DIIHRDLKPSNLAVNEDSELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 149
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 154
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 155 A---DIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK ++G ++K + R+ V ++ + ++ I +L P + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y + KL I+ + G+ + G + + + I R I GLDYLH+
Sbjct: 93 SYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHS---EK 144
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
IH ++K+ N+LL + + ++DFG+ L T + + + APE+IK
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
+ DI+S G+ +EL G+ P +E F +P +N +P L
Sbjct: 204 KADIWSLGITAIELARGEPPHSELHPMKVLFLIP---KN-----------NPPTL---EG 246
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
N+ P+ E AC + PS RP K++L
Sbjct: 247 NYSKPLKE--------FVEACLNKEPSFRPTAKELL 274
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 145
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 146 A---DIIHRDLKPSNLAVNEDSELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 149
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 150 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK ++G ++K + R+ V ++ + ++ I +L P + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y + KL I+ + G+ + G + + + I R I GLDYLH+
Sbjct: 73 SYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHS---EK 124
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
IH ++K+ N+LL + + ++DFG+ L T + + + APE+IK
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 183
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
+ DI+S G+ +EL G+ P +E F +P +N +P L
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLIP---KN-----------NPPTL---EG 226
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
N+ P+ E AC + PS RP K++L
Sbjct: 227 NYSKPLKE--------FVEACLNKEPSFRPTAKELL 254
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 148
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 149 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 145
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 146 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 17 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 70
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 127
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 181
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 229
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 230 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK ++G ++K + R+ V ++ + ++ I +L P + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y + KL I+ + G+ + G + + + I R I GLDYLH+
Sbjct: 73 SYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHS---EK 124
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
IH ++K+ N+LL + + ++DFG+ L T + + + APE+IK
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 183
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
+ DI+S G+ +EL G+ P +E F +P +N +P L
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLIP---KN-----------NPPTL---EG 226
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
N+ P+ E AC + PS RP K++L
Sbjct: 227 NYSKPLKE--------FVEACLNKEPSFRPTAKELL 254
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 141 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 150
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 151 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 203
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 153
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 154 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 206
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 145
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 146 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 117/276 (42%), Gaps = 36/276 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK ++G ++K + R+ V ++ + ++ I +L P + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y + KL I+ + G+ + G + + + I R I GLDYLH+
Sbjct: 88 SYL--KDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHS---EK 139
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
IH ++K+ N+LL + + ++DFG+ L T + + + APE+IK
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 198
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
+ DI+S G+ +EL G+ P +E F +P +N +P L
Sbjct: 199 KADIWSLGITAIELARGEPPHSELHPMKVLFLIP---KN-----------NPPTL---EG 241
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
N+ P+ E AC + PS RP K++L
Sbjct: 242 NYSKPLKE--------FVEACLNKEPSFRPTAKELL 269
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 148
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 149 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 15 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 68
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 125
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 179
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 227
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 228 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPV---CTTRDKEFGDLIELLGCIRHPNLVPLLG 133
+GK YG ++K++ +R+G V ++ + T + F +++ L H N+V LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE-AHKWSIIYRISIGIAGGLDYLHTGFHRP 192
+ + Y +L IR E HK ++Y++ + YLH+G
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQL----IKVIKYLHSG---G 129
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGL------------HLLLNPTAGQE--------MLE 232
++H ++K NILL+ V+DFGL ++ L+ E + +
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 233 ASASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
A++ Y+APE L+ ++ D++S G I+ E++ GK
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 142
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 143 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 195
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 154
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 155 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 162
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 163 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 141 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 163
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 164 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EXTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 167 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMXGYVATRWYRAPEIMLN 219
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 162
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 163 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 163
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 164 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 139
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 155
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 155
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 156 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 166
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 167 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 219
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 139
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +V+++ + ++ K F + + ++ + HPN+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H F
Sbjct: 79 FEVIETEKTLYLVME--YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ S Y APEL + K
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 139
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 140 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMAGFVATRWYRAPEIMLN 192
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 141
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 142 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 194
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 145
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 146 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +V+++ + ++ K F + + ++ + HPN+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H F
Sbjct: 79 FEVIETEKTLYLVME--YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ S Y APEL + K
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE-MLEASA-SQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M+E ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 212 GCIMGEMVCHK 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ + H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL+Q I+ ++Y++ +GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDATLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGC--IRHPNLVPLLG- 133
+G+ ++G +++ +++G F V R + F + EL+ C + P +VPL G
Sbjct: 82 VGRGSFGEVHRMKDKQTG------FQCAVKKVRLEVF-RVEELVACAGLSSPRIVPLYGA 134
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIA-GGLDYLHTGFHRP 192
GP I + G+L Q I+ ++ Y +G A GL+YLHT R
Sbjct: 135 VREGPWVN--IFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALEGLEYLHT---RR 186
Query: 193 IIHGNLKSKNILLDRN-YQPYVSDFGLHLLLNPTA-GQEMLEAS---ASQGYKAPELIKM 247
I+HG++K+ N+LL + + + DFG L L P G+ +L ++ + APE++
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 248 KDASEETDIYSFGVIMLELISGKEPINE 275
K + DI+S +ML +++G P +
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGC--IRHPNLVPLLG- 133
+G+ ++G +++ +++G F V R + F + EL+ C + P +VPL G
Sbjct: 66 VGRGSFGEVHRMKDKQTG------FQCAVKKVRLEVF-RVEELVACAGLSSPRIVPLYGA 118
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIA-GGLDYLHTGFHRP 192
GP I + G+L Q I+ ++ Y +G A GL+YLHT R
Sbjct: 119 VREGPWVN--IFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALEGLEYLHT---RR 170
Query: 193 IIHGNLKSKNILLDRN-YQPYVSDFGLHLLLNPTA-GQEMLEAS---ASQGYKAPELIKM 247
I+HG++K+ N+LL + + + DFG L L P G+ +L ++ + APE++
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 248 KDASEETDIYSFGVIMLELISGKEPINE 275
K + DI+S +ML +++G P +
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 19/209 (9%)
Query: 73 PGEVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIR 124
P IG YGT+YKA SG L+ +R P+ T R+ L+ L
Sbjct: 8 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVA---LLRRLEAFE 64
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPF---YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGG 181
HPN+V L+ A R ++ I + +L + I + G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
LD+LH I+H +LK +NIL+ ++DFGL + + + + Y+A
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYRA 179
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGK 270
PE++ + D++S G I E+ K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTT--RDKEFGDLIELLGCIRHPNLVPLLG 133
+G YG++ A+ +RSG V + + RP + + + +L+ LL ++H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLD 90
Query: 134 FYAGPRGEK-----LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
+ + +V PF + +L + + E ++Y++ GL Y+H+
Sbjct: 91 VFTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQYLVYQM----LKGLKYIHSA 145
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-KM 247
++H +LK N+ ++ + + + DFGL A EM ++ Y+APE+I
Sbjct: 146 ---GVVHRDLKPGNLAVNEDCELKILDFGL----ARHADAEMTGYVVTRWYRAPEVILSW 198
Query: 248 KDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM E+++GK
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTT--RDKEFGDLIELLGCIRHPNLVPLLG 133
+G YG++ A+ +RSG V + + RP + + + +L+ LL ++H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLD 108
Query: 134 FYAGPRGEK-----LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
+ + +V PF + +L + + E ++Y++ GL Y+H+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYLVYQM----LKGLKYIHSA 163
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-KM 247
++H +LK N+ ++ + + + DFGL A EM ++ Y+APE+I
Sbjct: 164 ---GVVHRDLKPGNLAVNEDCELKILDFGL----ARHADAEMTGYVVTRWYRAPEVILSW 216
Query: 248 KDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM E+++GK
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 122/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK ++G ++K + R+ V ++ + ++ I +L + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y +G KL I+ + G+ +R G + + + + + I GLDYLH+
Sbjct: 89 SYL--KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKGLDYLHS---EK 140
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
IH ++K+ N+LL ++DFG+ L T + + + APE+I+
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDS 199
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNS 312
+ DI+S G+ +EL G EP P+ D H MR +L
Sbjct: 200 KADIWSLGITAIELAKG-EP------PNSDMHP---MR---------------VLFLIPK 234
Query: 313 NHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
N+ + + F + AC + PS RP K++L
Sbjct: 235 NNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLI---------ELLGCIRHPN 127
+G YG++ A ++G LR K F +I LL ++H N
Sbjct: 42 VGSGAYGSVCAAFDTKTG-------LRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 128 LVPLLGFYAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
++ LL + R + L+ H N+ +C + + H +IY+I
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LR 148
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
GL Y+H+ IIH +LK N+ ++ + + + DFG L EM A++ Y+
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYR 201
Query: 241 APE-LIKMKDASEETDIYSFGVIMLELISGK 270
APE ++ ++ DI+S G IM EL++G+
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 24/257 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRD---KEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A +++ + L+ L ++ + IE+ +RHPN++
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
+ ++ R ++ F RG L + ++ + S + + D LH
Sbjct: 79 MYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA-----DALHYCHE 132
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +IH ++K +N+L+ + ++DFG + + M + Y PE+I+ K
Sbjct: 133 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM---CGTLDYLPPEMIEGKTH 189
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE--------DFHLPTFMRNAVLDHRITDL- 301
E+ D++ GV+ E + G P + +P+ E D P F+ + D I+ L
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFD-SPSHTETHRRIVNVDLKFPPFLSDGSKD-LISKLL 247
Query: 302 -YHPDMLLCSNSNHENP 317
YHP L E+P
Sbjct: 248 RYHPPQRLPLKGVMEHP 264
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +V+++ + ++ K F + + ++ + HPN+V L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 71
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H F
Sbjct: 72 FEVIETEKTLYLVME--YASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQKF 126
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ S Y APEL + K
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSGS-VRLLRFLRPVCTT--RDKEFGDLIELLGCIRHPNLVPLLG 133
+G YG + A+ R+G+ V + + RP + + + +L LL +RH N++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL-RLLKHMRHENVIGLLD 91
Query: 134 FYAGPRG-----EKLIVHPFYKRGNLAQCIRGGS-GEAHKWSIIYRISIGIAGGLDYLHT 187
+ + +V PF +L + ++ GE ++Y++ GL Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQM----LKGLRYIHA 146
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-K 246
IIH +LK N+ ++ + + + DFGL A EM ++ Y+APE+I
Sbjct: 147 A---GIIHRDLKPGNLAVNEDCELKILDFGL----ARQADSEMXGXVVTRWYRAPEVILN 199
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM E+I+GK
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%), Gaps = 24/257 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRD---KEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A +++ + L+ L ++ + IE+ +RHPN++
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
+ ++ R ++ F RG L + ++ + S + + D LH
Sbjct: 80 MYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA-----DALHYCHE 133
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +IH ++K +N+L+ + ++DFG + + M + Y PE+I+ K
Sbjct: 134 RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM---CGTLDYLPPEMIEGKTH 190
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDE--------DFHLPTFMRNAVLDHRITDL- 301
E+ D++ GV+ E + G P + +P+ E D P F+ + D I+ L
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFD-SPSHTETHRRIVNVDLKFPPFLSDGSKD-LISKLL 248
Query: 302 -YHPDMLLCSNSNHENP 317
YHP L E+P
Sbjct: 249 RYHPPQRLPLKGVMEHP 265
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 24/208 (11%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGC--IRHPNLVPLLG- 133
+G+ ++G +++ +++G F V R + F + EL+ C + P +VPL G
Sbjct: 80 LGRGSFGEVHRMKDKQTG------FQCAVKKVRLEVF-RVEELVACAGLSSPRIVPLYGA 132
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIA-GGLDYLHTGFHRP 192
GP I + G+L Q I+ ++ Y +G A GL+YLHT R
Sbjct: 133 VREGPWVN--IFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALEGLEYLHT---RR 184
Query: 193 IIHGNLKSKNILLDRN-YQPYVSDFGLHLLLNPTA-GQEMLEAS---ASQGYKAPELIKM 247
I+HG++K+ N+LL + + + DFG L L P G+ +L ++ + APE++
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 248 KDASEETDIYSFGVIMLELISGKEPINE 275
K + DI+S +ML +++G P +
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 128/307 (41%), Gaps = 61/307 (19%)
Query: 63 DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGC 122
D T D+ D GE IG+ YG++ K + + SG + ++ +R T +KE L+ L
Sbjct: 18 DFTAEDLKDL-GE-IGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDV 73
Query: 123 IRHPNLVP-LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKW------------- 168
+ + P ++ FY ++ G+ C+ S K+
Sbjct: 74 VMRSSDCPYIVQFYGA----------LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIP 123
Query: 169 -SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAG 227
I+ +I++ L++L IIH ++K NILLDR+ + DFG+ L +
Sbjct: 124 EEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181
Query: 228 QEMLEASASQGYKAPELIKMKDASE----ETDIYSFGVIMLELISGKEPINENPTPDEDF 283
+ + + Y APE I + + +D++S G+ + EL +G+ F
Sbjct: 182 KT--RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR------------F 227
Query: 284 HLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERIL--KFFQLAMACCSPSPSLR 341
P + N+V D ++T + D SN SEER F C + S R
Sbjct: 228 PYPKW--NSVFD-QLTQVVKGDPPQLSN-------SEEREFSPSFINFVNLCLTKDESKR 277
Query: 342 PNIKQVL 348
P K++L
Sbjct: 278 PKYKELL 284
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 110 DKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS 169
+++F + E++ + HP LV L G + +V F + G L+ +R G +
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGV-CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET 102
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE 229
++ + + + G+ YL +IH +L ++N L+ N VSDFG+ +
Sbjct: 103 LL-GMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 158
Query: 230 MLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTF 288
+ +PE+ S ++D++SFGV+M E+ S GK P + + T
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218
Query: 289 MRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
R LY P + S H +Q+ C P RP ++L
Sbjct: 219 FR----------LYKPRL----ASTH-----------VYQIMNHCWKERPEDRPAFSRLL 253
Query: 349 WKLEDLGK 356
+L ++ +
Sbjct: 254 RQLAEIAE 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L + NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 37/262 (14%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 41 AFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 98
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS----------------IIYRIS 175
LG P G +++ F K GNL+ +R E + I Y S
Sbjct: 99 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY--S 156
Query: 176 IGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLEA 233
+A G+++L + R IH +L ++NILL + DFGL + +P ++ +A
Sbjct: 157 FQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-DA 212
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLPT 287
+ APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLKE 268
Query: 288 FMRNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 269 GTRMRAPDYTTPEMYQ-TMLDC 289
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G + K + SG + R L L R++ +L L C N ++GF
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC----NSPYIVGF 79
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIR---GGS-----GEAHKW--SIIYRISIGIAGGLDY 184
Y FY G ++ C+ GGS EA + I+ ++SI + GL Y
Sbjct: 80 YGA----------FYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAY 129
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
L I+H ++K NIL++ + + DFG+ L + + ++ Y APE
Sbjct: 130 LREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPER 184
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAV 293
++ S ++DI+S G+ ++EL G+ PI P PD F R V
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGRYPI---PPPDAKELEAIFGRPVV 230
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +V+++ + ++ K F + + ++ + HPN+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L++ Y G + G + + +R I + Y H F
Sbjct: 79 FEVIETEKTLYLVME--YASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ + Y APEL + K
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L R +++++ + T+ K F + + ++ + HPN+V L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFRE-VRIMKILNHPNIVKL 76
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ LI+ Y G + G + + +R I + Y H
Sbjct: 77 FEVIETEKTLYLIME--YASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH--- 128
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ I+H +LK++N+LLD + ++DFG T G ++ S Y APEL + K
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 19/166 (11%)
Query: 125 HPNLVPLLGFYAGPRG---EKLIVHPFYKRGNLAQCIR--GGSGEAHKWSIIYRISIGIA 179
HPN++ L+ + RG E ++ PF+KRG L I G I + +GI
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFG------LHLLLNPTA--GQEML 231
GL+ +H + H +LK NILL QP + D G +H+ + A Q+
Sbjct: 145 RGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 232 EASASQGYKAPELIKMKD---ASEETDIYSFGVIMLELISGKEPIN 274
+ Y+APEL ++ E TD++S G ++ ++ G+ P +
Sbjct: 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + D+GL EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDYGL----ARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P T + F +++ +RH LV L Y
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQL---Y 79
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G L ++G G+ + + ++ IA G+ Y+ + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---V 136
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E +A QG K APE
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 190
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 238
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 239 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 8/245 (3%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G +G ++ A + V ++ ++P + + + ++ ++H LV L
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAE-ANVMKTLQHDKLVKLHAVVT 80
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+ I+ F +G+L ++ G + S IA G+ ++ R IH
Sbjct: 81 --KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHR 135
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L++ NIL+ + ++DFGL ++ A + APE I + ++D+
Sbjct: 136 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 195
Query: 257 YSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHE 315
+SFG++++E+++ G+ P P+ L R ++ +LY+ M N E
Sbjct: 196 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 255
Query: 316 NPVSE 320
P E
Sbjct: 256 RPTFE 260
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 110 DKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS 169
+++F + E++ + HP LV L G + +V F + G L+ +R G +
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGV-CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET 104
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE 229
++ + + + G+ YL +IH +L ++N L+ N VSDFG+ +
Sbjct: 105 LL-GMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 160
Query: 230 MLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTF 288
+ +PE+ S ++D++SFGV+M E+ S GK P + + T
Sbjct: 161 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Query: 289 MRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
R LY P + S H +Q+ C P RP ++L
Sbjct: 221 FR----------LYKPRL----ASTH-----------VYQIMNHCWKERPEDRPAFSRLL 255
Query: 349 WKLEDLGK 356
+L ++ +
Sbjct: 256 RQLAEIAE 263
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 19/209 (9%)
Query: 73 PGEVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIR 124
P IG YGT+YKA SG L+ +R P+ T R+ L+ L
Sbjct: 8 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVA---LLRRLEAFE 64
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPF---YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGG 181
HPN+V L+ A R ++ I + +L + I + G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
LD+LH I+H +LK +NIL+ ++DFGL + + + + Y+A
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYRA 179
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGK 270
PE++ + D++S G I E+ K
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 110 DKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS 169
+++F + E++ + HP LV L G + +V F + G L+ +R G +
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGV-CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAET 105
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE 229
++ + + + G+ YL +IH +L ++N L+ N VSDFG+ +
Sbjct: 106 LL-GMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161
Query: 230 MLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTF 288
+ +PE+ S ++D++SFGV+M E+ S GK P + + T
Sbjct: 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
Query: 289 MRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
R LY P + S H +Q+ C P RP ++L
Sbjct: 222 FR----------LYKPRL----ASTH-----------VYQIMNHCWRERPEDRPAFSRLL 256
Query: 349 WKLEDLGK 356
+L ++ +
Sbjct: 257 RQLAEIAE 264
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE-MLEASA-SQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M+E ++ Y+APE+I E D++S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSV 211
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 212 GCIMGEMVCHK 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLVPL 131
+ +G+ ++G + A +G L+ + + G + I L +RHP+++ L
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 132 LGFYAGPRGEKLIVHPFYKRGN-----LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
Y + + I+ GN + Q + EA R I ++Y H
Sbjct: 80 ---YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCH 130
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK 246
I+H +LK +N+LLD + ++DFGL ++ T G + + S Y APE+I
Sbjct: 131 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS 185
Query: 247 MK-DASEETDIYSFGVIMLELISGKEPINENPTP 279
K A E D++S GVI+ ++ + P ++ P
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 105/245 (42%), Gaps = 8/245 (3%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G +G ++ A + V ++ ++P + + + ++ ++H LV L
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAE-ANVMKTLQHDKLVKLHAVVT 253
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+ I+ F +G+L ++ G + S IA G+ ++ R IH
Sbjct: 254 --KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHR 308
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L++ NIL+ + ++DFGL ++ A + APE I + ++D+
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDV 368
Query: 257 YSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHE 315
+SFG++++E+++ G+ P P+ L R ++ +LY+ M N E
Sbjct: 369 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 428
Query: 316 NPVSE 320
P E
Sbjct: 429 RPTFE 433
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E +G+ YG +YKA G + L+ +R P R+ I LL + HP
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIRE------ISLLKELHHP 79
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI---RGGSGEAHKWSIIYRISIGIAGGLD 183
N+V L+ R L+ + +L + + + G ++ +Y++ G+A
Sbjct: 80 NIVSLIDVIHSERCLTLVFE--FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA---- 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
H HR I+H +LK +N+L++ + ++DFGL E + Y+AP+
Sbjct: 134 --HCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPD 189
Query: 244 -LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
L+ K S DI+S G I E+I+GK P+ T D+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQL 229
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 31/248 (12%)
Query: 110 DKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS 169
+++F + E++ + HP LV L G + +V F + G L+ +R G +
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGV-CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET 107
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE 229
++ + + + G+ YL +IH +L ++N L+ N VSDFG+ +
Sbjct: 108 LL-GMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163
Query: 230 MLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTF 288
+ +PE+ S ++D++SFGV+M E+ S GK P + + T
Sbjct: 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 223
Query: 289 MRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
R LY P + S H +Q+ C P RP ++L
Sbjct: 224 FR----------LYKPRL----ASTH-----------VYQIMNHCWRERPEDRPAFSRLL 258
Query: 349 WKLEDLGK 356
+L ++ +
Sbjct: 259 RQLAEIAE 266
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 38 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 96
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 97 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 149
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E D++S
Sbjct: 150 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSV 205
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 206 GCIMGEMVCHK 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E +G+ YG +YKA G + L+ +R P R+ I LL + HP
Sbjct: 27 EKVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIRE------ISLLKELHHP 79
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI---RGGSGEAHKWSIIYRISIGIAGGLD 183
N+V L+ R L+ + +L + + + G ++ +Y++ G+A
Sbjct: 80 NIVSLIDVIHSERCLTLVFE--FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA---- 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
H HR I+H +LK +N+L++ + ++DFGL E + Y+AP+
Sbjct: 134 --HCHQHR-ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV-VTLWYRAPD 189
Query: 244 -LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
L+ K S DI+S G I E+I+GK P+ T D+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK-PLFPGVTDDDQL 229
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 87/215 (40%), Gaps = 31/215 (14%)
Query: 73 PGEVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIR 124
P IG YGT+YKA SG L+ +R P+ T R+ L+ L
Sbjct: 8 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVA---LLRRLEAFE 64
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPF---YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGG 181
HPN+V L+ A R ++ I + +L + I + G
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 124
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL------HLLLNPTAGQEMLEASA 235
LD+LH I+H +LK +NIL+ ++DFGL + L+P
Sbjct: 125 LDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVV--------V 173
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGK 270
+ Y+APE++ + D++S G I E+ K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 49 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQ 107
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 108 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 160
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E D++S
Sbjct: 161 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSV 216
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 217 GCIMGEMVCHK 227
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLVPL 131
+ +G+ ++G + A +G L+ + + G + I L +RHP+++ L
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 132 LGFYAGPRGEKLIVHPFYKRGN-----LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
Y + + I+ GN + Q + EA R I ++Y H
Sbjct: 74 ---YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCH 124
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK 246
I+H +LK +N+LLD + ++DFGL ++ T G + + S Y APE+I
Sbjct: 125 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS 179
Query: 247 MK-DASEETDIYSFGVIMLELISGKEPINENPTP 279
K A E D++S GVI+ ++ + P ++ P
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +I L + N ++GF
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ----IIRELQVLHECNSPYIVGF 96
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 152
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 209
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPI---PPPD 234
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLVPL 131
+ +G+ ++G + A +G L+ + + G + I L +RHP+++ L
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 132 LGFYAGPRGEKLIVHPFYKRGN-----LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
Y + + I+ GN + Q + EA R I ++Y H
Sbjct: 70 ---YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCH 120
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK 246
I+H +LK +N+LLD + ++DFGL ++ T G + + S Y APE+I
Sbjct: 121 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS 175
Query: 247 MK-DASEETDIYSFGVIMLELISGKEPINENPTP 279
K A E D++S GVI+ ++ + P ++ P
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLVPL 131
+ +G+ ++G + A +G L+ + + G + I L +RHP+++ L
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN-----LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
Y + + I+ GN + Q + EA R I ++Y H
Sbjct: 79 ---YDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR------RFFQQIISAVEYCH 129
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK 246
I+H +LK +N+LLD + ++DFGL ++ T G + + S Y APE+I
Sbjct: 130 ---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVIS 184
Query: 247 MK-DASEETDIYSFGVIMLELISGKEPINENPTP 279
K A E D++S GVI+ ++ + P ++ P
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPFYKRGNLAQCIRGGS-GEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H +L ++ + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDXELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 31/251 (12%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + +F + E++ + HP LV L G + +V F + G L+ +R G
Sbjct: 63 SMSEDDFIEEAEVMMKLSHPKLVQLYGV-CLEQAPICLVFEFMEHGCLSDYLRTQRGLFA 121
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
+++ + + + G+ YL +IH +L ++N L+ N VSDFG+ +
Sbjct: 122 AETLL-GMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 177
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ +PE+ S ++D++SFGV+M E+ S GK P + +
Sbjct: 178 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
Query: 286 PTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
T R LY P + S H +Q+ C P RP
Sbjct: 238 STGFR----------LYKPRL----ASTH-----------VYQIMNHCWKERPEDRPAFS 272
Query: 346 QVLWKLEDLGK 356
++L +L ++ +
Sbjct: 273 RLLRQLAEIAE 283
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 24/254 (9%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRD---KEFGDLIELLGCIRHPNLVPLLG 133
+GK +G +Y A +++ + L+ L ++ + IE+ +RHPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
++ R ++ F RG L + ++ + S + + D LH R +
Sbjct: 82 YFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELA-----DALHYCHERKV 135
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEE 253
IH ++K +N+L+ + ++DFG + + M + Y PE+I+ K E+
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXM---CGTLDYLPPEMIEGKTHDEK 192
Query: 254 TDIYSFGVIMLELISGKEPINENPTPDE--------DFHLPTFMRNAVLDHRITDL--YH 303
D++ GV+ E + G P + +P+ E D P F+ + D I+ L YH
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFD-SPSHTETHRRIVNVDLKFPPFLSDGSKD-LISKLLRYH 250
Query: 304 PDMLLCSNSNHENP 317
P L E+P
Sbjct: 251 PPQRLPLKGVMEHP 264
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +I L + N ++GF
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ----IIRELQVLHECNSPYIVGF 69
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 125
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI---PPPD 207
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +I L + N ++GF
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ----IIRELQVLHECNSPYIVGF 69
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 125
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI---PPPD 207
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +L L C N ++GF
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC----NSPYIVGF 69
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 125
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI---PPPD 207
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDXTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G++ ++ L+ + ++F I++L + +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 133 GFYAGP-RGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
G GP R E +V + G L ++ S + S I G++YL + R
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDA-SRLLLYSSQICKGMEYLGS---R 130
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMK 248
+H +L ++NIL++ ++DFGL LL P + Q + APE +
Sbjct: 131 RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPESLSDN 189
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDF--------HLPTFMRNAVLDHRITD 300
S ++D++SFGV++ EL + +++ +P +F +P R L
Sbjct: 190 IFSRQSDVWSFGVVLYELFTY---CDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 246
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
L P C HE L C +PSP RP+ +
Sbjct: 247 LPAPPA--CPAEVHE-------------LMKLCWAPSPQDRPSFSAL 278
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L R +++++ + T+ K F + + ++ + HPN+V L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFRE-VRIMKILNHPNIVKL 79
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ LI+ Y G + G + + +R I + Y H
Sbjct: 80 FEVIETEKTLYLIME--YASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH--- 131
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+ I+H +LK++N+LLD + ++DFG T G ++ + Y APEL + K
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 18/190 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L+R+ +++ L T + + +L+ L+ + H N++ LL + + +
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELV-LMKVVNHKNIIGLLNVFTPQKSLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL+Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDATLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISG 269
G IM E+I G
Sbjct: 212 GCIMGEMIKG 221
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +L L C N ++GF
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC----NSPYIVGF 69
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 125
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI---PPPD 207
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPFYKRGNLAQCIRGGS-GEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H +L ++ + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTH--LMGADLNNIVKSQKLTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDSELKILDFG----LCRHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +I L + N ++GF
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ----IIRELQVLHECNSPYIVGF 69
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 125
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 182
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI---PPPD 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 37 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 95
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 96 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK----HLHSA---GIIHRDLKPS 148
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 149 NIVVKSDXTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 205 GCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 38 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 96
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 97 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 149
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 150 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 205
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 206 GCIMGEMVRHK 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +L L C N ++GF
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC----NSPYIVGF 131
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL H+
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLREK-HK- 187
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 244
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPD 280
++DI+S G+ ++E+ G+ PI P PD
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPI---PPPD 269
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-S 236
I GL++LH R II+ +LK +N+LLD + +SD GL + L AGQ + A +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
G+ APEL+ ++ D ++ GV + E+I+ + P E+ L + VL+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL----KQRVLEQ 408
Query: 297 RITDLYHPD 305
+T +PD
Sbjct: 409 AVT---YPD 414
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 37 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 95
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 148
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 149 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 204
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 205 GCIMGEMVRHK 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
HPN++ L Y +V K+G L + K ++ + + I L
Sbjct: 70 HPNIIQLKDTYE-TNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETRKIMRALLE 122
Query: 185 LHTGFHR-PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+ H+ I+H +LK +NILLD + ++DFG L+P G+++ E + Y APE
Sbjct: 123 VICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAPE 180
Query: 244 LIK--MKD----ASEETDIYSFGVIMLELISGKEPI 273
+I+ M D +E D++S GVIM L++G P
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPFYKRGNLAQCIRGGS-GEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H +L ++ + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTH--LMGADLNNIVKXQKLTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 45 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 103
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 104 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 156
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 157 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 212
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 213 GCIMGEMVRHK 223
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 82 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 140
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 193
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 194 NIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 250 GCIMGEMVRHK 260
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALL-QRSGS-----VRLLRFLRPVCTTRDKEFGD 115
ED+ I + G ++GK +G++ +A L Q GS V++L+ + + D E +
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK--ADIIASSDIE--E 71
Query: 116 LIELLGCIR---HPNLVPLLGFYAGPRGE-----KLIVHPFYKRGNLAQCIRGGSGEAHK 167
+ C++ HP++ L+G R + +++ PF K G+L + +
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 168 WSI----IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN 223
+++ + R + IA G++YL + R IH +L ++N +L + V+DFGL +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKI- 187
Query: 224 PTAGQEMLEASASQ---GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
+G + AS+ + A E + + +D+++FGV M E+++ G+ P
Sbjct: 188 -YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 43 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 101
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 102 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 154
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 155 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 210
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 211 GCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 45 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 103
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 104 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 156
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 157 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 212
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 213 GCIMGEMVRHK 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 38 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 96
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 97 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 149
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 150 NIVVKSDCTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 205
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 206 GCIMGEMVRHK 216
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 100/247 (40%), Gaps = 31/247 (12%)
Query: 110 DKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS 169
+++F + E++ + HP LV L G + +V F + G L+ +R G +
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGV-CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET 104
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE 229
++ + + + G+ YL +IH +L ++N L+ N VSDFG+ +
Sbjct: 105 LL-GMCLDVCEGMAYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 160
Query: 230 MLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTF 288
+ +PE+ S ++D++SFGV+M E+ S GK P + + T
Sbjct: 161 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Query: 289 MRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
R LY P + S H +Q+ C P RP ++L
Sbjct: 221 FR----------LYKPRL----ASTH-----------VYQIMNHCWKERPEDRPAFSRLL 255
Query: 349 WKLEDLG 355
+L +
Sbjct: 256 RQLAAIA 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK--MKD- 249
I+H +LK +NILLD + ++DFG L+P G+++ E + Y APE+I+ M D
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLREVCGTPSYLAPEIIECSMNDN 202
Query: 250 ---ASEETDIYSFGVIMLELISGKEPI 273
+E D++S GVIM L++G P
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 121/286 (42%), Gaps = 49/286 (17%)
Query: 77 IGKSNYGTLYKALLQRSGSVRL-LRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
+G+ +G ++ +G+ R+ ++ L+P + F +++ +RH LV L Y
Sbjct: 193 LGQGCFGEVWMGTW--NGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQL---Y 246
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
A E + IV + +G+L ++G G+ + + ++ IA G+ Y+ +
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYV 303
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK------APELIKMK 248
H +L++ NIL+ N V+DFGL L+ E E +A QG K APE
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLI------EDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++D++SFG+++ EL + G+ P P + VLD P
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCPP 405
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
C S H+ L C P RP + + LED
Sbjct: 406 ECPESLHD-------------LMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-S 236
I GL++LH R II+ +LK +N+LLD + +SD GL + L AGQ + A +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
G+ APEL+ ++ D ++ GV + E+I+ + P E+ L + VL+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL----KQRVLEQ 408
Query: 297 RITDLYHPD 305
+T +PD
Sbjct: 409 AVT---YPD 414
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 14/216 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRH---PNLVPL 131
E +G+ +YG++YKA+ + +G + ++ + PV + + ++I+ + ++ P++V
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQV-PV----ESDLQEIIKEISIMQQCDSPHVVKY 89
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
G Y + IV + G+++ IR + + I I GL+YLH F R
Sbjct: 90 YGSYFK-NTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIATILQSTLKGLEYLH--FMR 145
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDAS 251
I H ++K+ NILL+ ++DFG+ L + + + APE+I+ +
Sbjct: 146 KI-HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX-VIGTPFWMAPEVIQEIGYN 203
Query: 252 EETDIYSFGVIMLELISGKEPINENPTPDEDFHLPT 287
DI+S G+ +E+ GK P + F +PT
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +I L + N ++GF
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ----IIRELQVLHECNSPYIVGF 88
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 144
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L + + ++ Y +PE ++ S
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSV 201
Query: 253 ETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRN 291
++DI+S G+ ++E+ G+ PI F L ++ N
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVN 240
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ C+ H N++ LL + + +
Sbjct: 82 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQ 140
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLKPS 193
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 194 NIVVKSDCTLKILDFGLAR----TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 249
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 250 GCIMGEMVRHK 260
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 7/155 (4%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
+ +L ++HPN+V + G IV + + G+L + I G + I +
Sbjct: 74 VAVLANMKHPNIVQYRESFE-ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS-A 235
I L ++H R I+H ++KS+NI L ++ + DFG+ +LN T E+ A
Sbjct: 133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--ELARACIG 187
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGK 270
+ Y +PE+ + K + ++DI++ G ++ EL + K
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLK 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 22/212 (10%)
Query: 73 PGEVIGKSNYGTLYKALLQRSGSVRLLRFLR-----------PVCTTRDKEFGDLIELLG 121
P IG YGT+YKA SG L+ +R P+ T R+ L+ L
Sbjct: 13 PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA---LLRRLE 69
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPF---YKRGNLAQCIRGGSGEAHKWSIIYRISIGI 178
HPN+V L+ A R ++ I + +L + I +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 179 AGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG 238
GLD+LH I+H +LK +NIL+ ++DFGL + + + +
Sbjct: 130 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTLW 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGK 270
Y+APE++ + D++S G I E+ K
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-S 236
I GL++LH R II+ +LK +N+LLD + +SD GL + L AGQ + A +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
G+ APEL+ ++ D ++ GV + E+I+ + P E+ L + VL+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL----KQRVLEQ 408
Query: 297 RITDLYHPD 305
+T +PD
Sbjct: 409 AVT---YPD 414
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-S 236
I GL++LH R II+ +LK +N+LLD + +SD GL + L AGQ + A +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--AGQTKTKGYAGT 352
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
G+ APEL+ ++ D ++ GV + E+I+ + P E+ L + VL+
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL----KQRVLEQ 408
Query: 297 RITDLYHPD 305
+T +PD
Sbjct: 409 AVT---YPD 414
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DF L EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDF----YLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 82 RLLGICLTSTVQLIMQLMPF---GXLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 132
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 133 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 185
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 104/230 (45%), Gaps = 16/230 (6%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-----RHPNLVP 130
VIG+ +Y + L+++ + +R ++ D++ D ++ + HP LV
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDI-DWVQTEKHVFEQASNHPFLVG 117
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L + V + G+L ++ + + Y I +A L+YLH
Sbjct: 118 LHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH---E 171
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
R II+ +LK N+LLD ++D+G+ L P G + Y APE+++ +D
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSTFCGTPNYIAPEILRGED 229
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDE-DFHLPTFMRNAVLDHRI 298
D ++ GV+M E+++G+ P + + D D + ++ +L+ +I
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 109/274 (39%), Gaps = 36/274 (13%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPLLGFY 135
IGK ++G +YK + + V ++ + ++ I +L P + G Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 136 AGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
+ KL I+ + G+ ++ G E + I R I GLDYLH+ I
Sbjct: 87 L--KSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR---EILKGLDYLHS---ERKI 138
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEET 254
H ++K+ N+LL ++DFG+ L T + + + APE+IK +
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDFKA 197
Query: 255 DIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNH 314
DI+S G+ +EL G EP P+ D H R+ L + H
Sbjct: 198 DIWSLGITAIELAKG-EP------PNSDLH----------PMRVLFLIPKNSPPTLEGQH 240
Query: 315 ENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
P F + AC + P RP K++L
Sbjct: 241 SKP--------FKEFVEACLNKDPRFRPTAKELL 266
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRDKE-FGDLIELLGCIRHPNLVPLL 132
V+GK ++G + + +G ++ + R V DKE ++LL + HPN++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
F+ +G +V Y G L I R E II ++ GI Y+H
Sbjct: 93 EFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT----YMHKN-- 145
Query: 191 RPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
I+H +LK +N+LL+ ++ + DFGL A ++M + + Y APE++
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVLH- 201
Query: 248 KDASEETDIYSFGVIMLELISGKEPIN 274
E+ D++S GVI+ L+SG P N
Sbjct: 202 GTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVPLL 132
GE IG+ N+G ++ L+ ++ ++ R K +F +L HPN+V L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
G + IV + G+ +R G + + ++ A G++YL + +
Sbjct: 179 GV-CTQKQPIYIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLES---KC 233
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--------YKAPEL 244
IH +L ++N L+ +SDFG+ + +E A+ G + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGM-------SREEADGVXAASGGLRQVPVKWTAPEA 286
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPD 280
+ S E+D++SFG+++ E S + +P P+
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS----LGASPYPN 318
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSGS-----VRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V ++ +KE D ++ + +P++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 115 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 165
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 166 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 218
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 261
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 75 EVIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+ IGK N+ + A L + +V+++ + ++ K F + + + + HPN+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIXKVLNHPNIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGN--LAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
+ L+ Y G + G + + +R I + Y H F
Sbjct: 79 FEVIETEKTLYLVXE--YASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
I+H +LK++N+LLD + ++DFG T G ++ + Y APEL + K
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 250 AS-EETDIYSFGVIMLELISGKEPIN 274
E D++S GVI+ L+SG P +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+G YG++ A L Q+ +L R + + R + + +L LL ++H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR-RTYREL-RLLKHLKHENVIGLL 93
Query: 133 GFYAGPRG-----EKLIVHPFYKR--GNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYL 185
+ E +V N+ +C + H ++Y++ GL Y+
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQL----LRGLKYI 147
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-L 244
H+ IIH +LK N+ ++ + + + DFG L A +EM A++ Y+APE +
Sbjct: 148 HSA---GIIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVATRWYRAPEIM 200
Query: 245 IKMKDASEETDIYSFGVIMLELISGK 270
+ ++ DI+S G IM EL+ GK
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G YLH +IH +LK N+ L+ + + + DFGL + G+ +
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKTLCGTP 181
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE++ K S E D++S G IM L+ GK P + + T++R ++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNEYS 235
Query: 298 ITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
I H NPV+ I K Q P+ RP I ++L
Sbjct: 236 I-------------PKHINPVAASLIQKMLQT-------DPTARPTINELL 266
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 82 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 132
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 133 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 185
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G YLH +IH +LK N+ L+ + + + DFGL + G+ +
Sbjct: 126 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKTLCGTP 181
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE++ K S E D++S G IM L+ GK P + + T++R ++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNEYS 235
Query: 298 ITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
I H NPV+ I K Q P+ RP I ++L
Sbjct: 236 I-------------PKHINPVAASLIQKMLQT-------DPTARPTINELL 266
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 27/206 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+G YG++ A L Q+ +L R + + R + + +L LL ++H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR-RTYREL-RLLKHLKHENVIGLL 85
Query: 133 GFYAGPRG-----EKLIVHPFY--KRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYL 185
+ E +V N+ +C + H ++Y++ GL Y+
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKC--QALSDEHVQFLVYQL----LRGLKYI 139
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-L 244
H+ IIH +LK N+ ++ + + + DFG L A +EM A++ Y+APE +
Sbjct: 140 HSA---GIIHRDLKPSNVAVNEDCELRILDFG----LARQADEEMTGYVATRWYRAPEIM 192
Query: 245 IKMKDASEETDIYSFGVIMLELISGK 270
+ ++ DI+S G IM EL+ GK
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + FGL EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILGFGL----ARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 84 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 134
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 135 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 187
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 81 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + D GL EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDAGL----ARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G YLH +IH +LK N+ L+ + + + DFGL + G+ +
Sbjct: 130 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKTLCGTP 185
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE++ K S E D++S G IM L+ GK P + + T++R ++
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNEYS 239
Query: 298 ITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
I H NPV+ I K Q P+ RP I ++L
Sbjct: 240 I-------------PKHINPVAASLIQKMLQT-------DPTARPTINELL 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 30/280 (10%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
EVIG + A + V + R C T E I+ + HPN+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRG--GSGEAHKWSIIYRISIG-----IAGGLDYLH 186
+ + E +V G++ I+ GE HK ++ +I + GL+YLH
Sbjct: 81 SFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILREVLEGLEYLH 138
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL----NPTAGQEMLEASASQGYKAP 242
IH ++K+ NILL + ++DFG+ L + T + + + AP
Sbjct: 139 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 243 ELI-KMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL-----PTFMRNAVLDH 296
E++ +++ + DI+SFG+ +EL +G P ++ P P + L P + V D
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETGVQDK 254
Query: 297 RITDLYHPD----MLLCSNSNHENPVSEERIL--KFFQLA 330
+ Y + LC + E + +L KFFQ A
Sbjct: 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 83 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 134 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 186
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 71
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 72 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 128
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 129 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGX 185
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRDKE-FGDLIELLGCIRHPNLVPLL 132
V+GK ++G + + +G ++ + R V DKE ++LL + HPN++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
F+ +G +V Y G L I R E II ++ GI Y+H
Sbjct: 116 EFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT----YMHKN-- 168
Query: 191 RPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
I+H +LK +N+LL+ ++ + DFGL A ++M + + Y APE++
Sbjct: 169 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVLH- 224
Query: 248 KDASEETDIYSFGVIMLELISGKEPIN 274
E+ D++S GVI+ L+SG P N
Sbjct: 225 GTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 68
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 69 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 125
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 126 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 182
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 116/280 (41%), Gaps = 30/280 (10%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
EVIG + A + V + R C T E I+ + HPN+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRG--GSGEAHKWSIIYRISIG-----IAGGLDYLH 186
+ + E +V G++ I+ GE HK ++ +I + GL+YLH
Sbjct: 76 SFV-VKDELWLVMKLLSGGSVLDIIKHIVAKGE-HKSGVLDESTIATILREVLEGLEYLH 133
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL----NPTAGQEMLEASASQGYKAP 242
IH ++K+ NILL + ++DFG+ L + T + + + AP
Sbjct: 134 KNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 243 ELI-KMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL-----PTFMRNAVLDH 296
E++ +++ + DI+SFG+ +EL +G P ++ P P + L P + V D
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYP-PMKVLMLTLQNDPPSLETGVQDK 249
Query: 297 RITDLYHPD----MLLCSNSNHENPVSEERIL--KFFQLA 330
+ Y + LC + E + +L KFFQ A
Sbjct: 250 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
LD + I+H ++K +NIL+D N + DFG+ L+ T+ + + Y +
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
PE K + E TDIYS G+++ E++ G+ P N
Sbjct: 181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRDKE-FGDLIELLGCIRHPNLVPLL 132
V+GK ++G + + +G ++ + R V DKE ++LL + HPN++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
F+ +G +V Y G L I R E II ++ GI Y+H
Sbjct: 117 EFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT----YMH---K 168
Query: 191 RPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
I+H +LK +N+LL+ ++ + DFGL A ++M + + Y APE++
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVLH- 225
Query: 248 KDASEETDIYSFGVIMLELISGKEPIN 274
E+ D++S GVI+ L+SG P N
Sbjct: 226 GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGX 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G YLH +IH +LK N+ L+ + + + DFGL + G+ +
Sbjct: 124 IVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTP 179
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE++ K S E D++S G IM L+ GK P + + T++R ++
Sbjct: 180 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNEYS 233
Query: 298 ITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
I H NPV+ I K Q P+ RP I ++L
Sbjct: 234 I-------------PKHINPVAASLIQKMLQT-------DPTARPTINELL 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 24/232 (10%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
GE+IGK +G +Y ++RL+ R + K F + RH N+V +G
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSG--EAHKWSIIYRISIGIAGGLDYLHTGFHR 191
P I+ K L +R + +K +I+ I G+ YLH +
Sbjct: 97 ACMSP-PHLAIITSLCKGRTLYSVVRDAKIVLDVNK---TRQIAQEIVKGMGYLHA---K 149
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNP-TAGQEMLEASASQGY---KAPELIKM 247
I+H +LKSKN+ D N + ++DFGL + AG+ + G+ APE+I+
Sbjct: 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 248 KDA---------SEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMR 290
S+ +D+++ G I EL + + P P + + T M+
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMK 260
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVPLL 132
GE IG+ N+G ++ L+ ++ ++ R K +F +L HPN+V L+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
G + IV + G+ +R G + + ++ A G++YL + +
Sbjct: 179 GV-CTQKQPIYIVMELVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLES---KC 233
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG--------YKAPEL 244
IH +L ++N L+ +SDFG+ + +E A+ G + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGM-------SREEADGVYAASGGLRQVPVKWTAPEA 286
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTPD 280
+ S E+D++SFG+++ E S + +P P+
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFS----LGASPYPN 318
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 71
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 72 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 128
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 129 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 185
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 97/220 (44%), Gaps = 13/220 (5%)
Query: 56 VTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGD 115
V + G DIL E +G +G +++ + + +G V + +F+ +
Sbjct: 42 VEVKQGSVYDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN 97
Query: 116 LIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRIS 175
I ++ + HP L+ L + + E +++ F G L I + + +I +
Sbjct: 98 EISIMNQLHHPKLINLHDAFED-KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 176 IGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVS--DFGLHLLLNPTAGQEMLEA 233
G L ++H I+H ++K +NI+ + V DFGL LNP ++ A
Sbjct: 157 QACEG-LKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA 212
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
+A + APE++ + TD+++ GV+ L+SG P
Sbjct: 213 TAE--FAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 85 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 135
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 136 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 188
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 81 RLLGICLTSTVQLITQLMPF---GXLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E IG+ YG +YKA + +G V L+ +R P R+ I LL + HP
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE------ISLLKELNHP 62
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
N+V LL L+ + +L + + + +I + GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LI 245
+ HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 S--HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 176
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 66
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 67 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 123
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 124 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 180
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + D GL EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDRGL----ARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 67
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 68 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 124
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 125 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 181
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 66
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 67 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 123
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 124 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 180
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 65
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 66 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 122
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 123 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 179
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G YLH +IH +LK N+ L+ + + + DFGL + G+ +
Sbjct: 148 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE++ K S E D++S G IM L+ GK P + + T++R ++
Sbjct: 204 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNEYS 257
Query: 298 ITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
I H NPV+ I K Q P+ RP I ++L
Sbjct: 258 I-------------PKHINPVAASLIQKMLQT-------DPTARPTINELL 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 17/218 (7%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL 285
K S DI+S G I E+++ + + D+ F +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 63
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 64 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 177
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 65
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + + +I + GL + H+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 122
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 123 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 179
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 63
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 64 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 177
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 67
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + + +I + GL + H+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 124
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 125 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 181
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 63
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 64 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 177
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G++ ++ L+ + ++F I++L + +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 133 GFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
G GP + L +V + G L ++ S + S I G++YL + R
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-SRLLLYSSQICKGMEYLGS---R 134
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMK 248
+H +L ++NIL++ ++DFGL LL P + Q + APE +
Sbjct: 135 RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDN 193
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDF--------HLPTFMRNAVLDHRITD 300
S ++D++SFGV++ EL + +++ +P +F +P R L
Sbjct: 194 IFSRQSDVWSFGVVLYELFTY---CDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQR 250
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
L P C HE L C +PSP RP+ +
Sbjct: 251 LPAPPA--CPAEVHE-------------LMKLCWAPSPQDRPSFSAL 282
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 63
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 64 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 177
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 68
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + + +I + GL + H+
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 125
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 126 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 182
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 65
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + + +I + GL + H+
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQ--DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 122
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 123 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 179
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 66
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 67 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 123
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 124 -HR-VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 180
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G YLH +IH +LK N+ L+ + + + DFGL + G+ +
Sbjct: 150 IVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTP 205
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE++ K S E D++S G IM L+ GK P + + T++R ++
Sbjct: 206 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNEYS 259
Query: 298 ITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
I H NPV+ I K Q P+ RP I ++L
Sbjct: 260 I-------------PKHINPVAASLIQKMLQT-------DPTARPTINELL 290
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+ +++ G L+K Q + V + +R T + ++F + L HPN++P+LG
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 137 GPRG--EKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
P LI H + G+L + G+ S + ++ +A G+ +LHT P+I
Sbjct: 78 SPPAPHPTLITH-WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT--LEPLI 134
Query: 195 -HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDAS-- 251
L S+++++D + +S + + G+ A + APE ++ K
Sbjct: 135 PRHALNSRSVMIDEDMTARISMADVKFSFQ-SPGRMYAPA-----WVAPEALQKKPEDTN 188
Query: 252 -EETDIYSFGVIMLELISGKEPINE 275
D++SF V++ EL++ + P +
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFAD 213
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 81 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 91 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 141
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 142 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 194
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 237
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 75 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 125
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 126 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 178
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 106 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 156
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 157 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 209
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 252
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 87 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 137
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 138 YLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 190
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 233
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 101/249 (40%), Gaps = 31/249 (12%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + + + HP LV G IV + G L +R G+
Sbjct: 44 SMSEDEFFQEAQTMMKLSHPKLVKFYGV-CSKEYPIYIVTEYISNGCLLNYLRS-HGKGL 101
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
+ S + + + G+ +L + IH +L ++N L+DR+ VSDFG+ +
Sbjct: 102 EPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + APE+ S ++D+++FG++M E+ S GK P + +
Sbjct: 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE----- 213
Query: 286 PTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
+ HR LY P L S++ +Q+ +C P RP +
Sbjct: 214 --VVLKVSQGHR---LYRPH--LASDT-------------IYQIMYSCWHELPEKRPTFQ 253
Query: 346 QVLWKLEDL 354
Q+L +E L
Sbjct: 254 QLLSSIEPL 262
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRDKE-FGDLIELLGCIRHPNLVPLL 132
V+GK ++G + + +G ++ + R V DKE ++LL + HPN++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
F+ +G +V Y G L I R E II ++ GI Y+H
Sbjct: 99 EFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT----YMHKN-- 151
Query: 191 RPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
I+H +LK +N+LL+ ++ + DFGL A ++M + + Y APE++
Sbjct: 152 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKMKDKIGTAYYIAPEVLH- 207
Query: 248 KDASEETDIYSFGVIMLELISGKEPIN 274
E+ D++S GVI+ L+SG P N
Sbjct: 208 GTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 81 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 100/224 (44%), Gaps = 18/224 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFG-DLIE--LLGCIRHPNLVPLL 132
V+GK ++G + A + + + ++ L+ +D + ++E +L + P + L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
V + G+L I+ ++ Y I I GL +LH R
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI--GLFFLHK---RG 140
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGL---HLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
II+ +LK N++LD ++DFG+ H++ G E + Y APE+I +
Sbjct: 141 IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMM----DGVTTREFCGTPDYIAPEIIAYQP 196
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAV 293
+ D +++GV++ E+++G+ P + DED + M + V
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGE---DEDELFQSIMEHNV 237
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 84 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 134
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 135 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 187
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 65
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 66 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 122
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 123 -HR-VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 179
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 84 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 134
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 135 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 187
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 39/287 (13%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G++ ++ L+ + ++F I++L + +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 133 GFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
G GP + L +V + G L ++ S + S I G++YL + R
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-SRLLLYSSQICKGMEYLGS---R 133
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMK 248
+H +L ++NIL++ ++DFGL LL P + Q + APE +
Sbjct: 134 RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDN 192
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDF--------HLPTFMRNAVLDHRITD 300
S ++D++SFGV++ EL + +++ +P +F +P R L
Sbjct: 193 IFSRQSDVWSFGVVLYELFTY---CDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQR 249
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
L P C HE L C +PSP RP+ +
Sbjct: 250 LPAPPA--CPAEVHE-------------LMKLCWAPSPQDRPSFSAL 281
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 84 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 134
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 135 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 187
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 230
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPV-CTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ A ++G V + + RP K + LL ++H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ R + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 143
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + D GL EM A++ Y+APE ++
Sbjct: 144 A---DIIHRDLKPSNLAVNEDCELKILDGGL----ARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL++G+
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 83 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 134 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 186
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 88 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 138
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 139 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 191
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 63
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + +I + GL + H+
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQ--DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 177
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+G YG++ A L Q+ +L R + + R + + +L LL ++H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR-RTYREL-RLLKHLKHENVIGLL 93
Query: 133 GFYAGPRG-----EKLIVHPFYKRGNLAQCIRGGS-GEAHKWSIIYRISIGIAGGLDYLH 186
+ E +V +L ++ + + H ++Y++ GL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQFLVYQL----LRGLKYIH 148
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LI 245
+ IIH +LK N+ ++ + + + DFG L A +EM A++ Y+APE ++
Sbjct: 149 SA---GIIHRDLKPSNVAVNEDSELRILDFG----LARQADEEMTGYVATRWYRAPEIML 201
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
++ DI+S G IM EL+ GK
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 77 IGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLL 132
+GK N+G++ Y L +G++ ++ L+ + ++F I++L + +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 133 GFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
G GP + L +V + G L ++ S + S I G++YL + R
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-SRLLLYSSQICKGMEYLGS---R 146
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMK 248
+H +L ++NIL++ ++DFGL LL P + Q + APE +
Sbjct: 147 RCVHRDLAARNILVESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYAPESLSDN 205
Query: 249 DASEETDIYSFGVIMLELISGKEPINENPTPDEDF 283
S ++D++SFGV++ EL + +++ +P +F
Sbjct: 206 IFSRQSDVWSFGVVLYELFTY---CDKSCSPSAEF 237
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 78 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAEGMN 128
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 129 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 181
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 57 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 113
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH NL++ NIL+ ++DFGL L+ A
Sbjct: 114 IAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 170
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 230
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 231 CPEELYQL-MRLCWKERPED 249
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 71 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 123
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 75 EVIGKSNYGTLY---KALLQRSGSVRLLRFLRPVC-TTRDKEFGDL-IELLGCIRHPNLV 129
+V+G+ ++G ++ K SG + ++ L+ RD+ + ++L + HP +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L + G+ ++ F + G+L + + Y + + GLD+LH+
Sbjct: 94 KL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL--GLDHLHS-- 148
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIK 246
II+ +LK +NILLD ++DFGL + A +A + G Y APE++
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGL----SKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 247 MKDASEETDIYSFGVIMLELISGKEPIN 274
+ S D +S+GV+M E+++G P
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRI 174
I LL + HPN++ L + + L+ FY+ G L + I R E +I+ +I
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVT-EFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRN---YQPYVSDFGLHLLLNPTAGQEML 231
GI YLH I+H ++K +NILL+ + DFGL + ++
Sbjct: 156 LSGIC----YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF--SKDYKLR 206
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
+ + Y APE++K K +E+ D++S GVIM L+ G P
Sbjct: 207 DRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 67
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 68 VKLLDVIHTENKLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 124
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 125 -HR-VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 181
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 121/305 (39%), Gaps = 68/305 (22%)
Query: 78 GKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAG 137
GK Y ++ + ++ L+ K+F ELL ++H ++V G
Sbjct: 27 GKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV- 85
Query: 138 PRGEKLI-VHPFYKRGNLAQCIRGGSGEAH-----------KWSIIYRISIGIAGGLDYL 185
G+ LI V + K G+L + +R +A S + I+ IA G+ YL
Sbjct: 86 -EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL 144
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASASQGYK 240
+ + +H +L ++N L+ N + DFG+ + T G ML +
Sbjct: 145 AS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WM 197
Query: 241 APELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRIT 299
PE I + + E+D++S GV++ E+ + GK+P +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ------------------------ 233
Query: 300 DLYHPDMLLCSNSNHENPVSEERILK--------FFQLAMACCSPSPSLRPNIKQVLWKL 351
SN+ +++ R+L+ ++L + C P +R NIK + L
Sbjct: 234 ---------LSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLL 284
Query: 352 EDLGK 356
++L K
Sbjct: 285 QNLAK 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 67
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ ++ +L + + +I + GL + H+
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQ--DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 124
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 125 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 181
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 76 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 128
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIE---LLGCIRHPNLVPLLG 133
IG ++G +Y A R+ V ++ + ++++ D+I+ L +RHPN + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLHTGF 189
Y L++ Y G+ + + E HK + I ++ G GL YLH+
Sbjct: 122 CYLREHTAWLVME--YCLGSASDLL-----EVHKKPLQEVEIAAVTHGALQGLAYLHS-- 172
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+IH ++K+ NILL + DFG ++ P + + APE+I D
Sbjct: 173 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-----XFVGTPYWMAPEVILAMD 226
Query: 250 ASE---ETDIYSFGVIMLELISGKEP------------INENPTPD-EDFHLPTFMRNAV 293
+ + D++S G+ +EL K P I +N +P + H + RN V
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 286
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 9/198 (4%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G +G ++ S V ++ L+P T + F + L+ ++H LV L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
R E + I+ + +G+L ++ G + S IA G+ Y+ + IH
Sbjct: 79 --REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIH 133
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
+L++ N+L+ + ++DFGL ++ A + APE I + ++D
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 256 IYSFGVIMLELIS-GKEP 272
++SFG+++ E+++ GK P
Sbjct: 194 VWSFGILLYEIVTYGKIP 211
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-----RHPNLVP 130
VIG+ +Y + L+++ + ++ ++ D++ D ++ + HP LV
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI-DWVQTEKHVFEQASNHPFLVG 74
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L + V + G+L ++ + + Y I +A L+YLH
Sbjct: 75 LHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH---E 128
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
R II+ +LK N+LLD ++D+G+ L P G + Y APE+++ +D
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSXFCGTPNYIAPEILRGED 186
Query: 250 ASEETDIYSFGVIMLELISGKEP---INENPTPDED 282
D ++ GV+M E+++G+ P + + PD++
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-----RHPNLVP 130
VIG+ +Y + L+++ + ++ ++ D++ D ++ + HP LV
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI-DWVQTEKHVFEQASNHPFLVG 85
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L + V + G+L ++ + + Y I +A L+YLH
Sbjct: 86 LHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH---E 139
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
R II+ +LK N+LLD ++D+G+ L P G + Y APE+++ +D
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSXFCGTPNYIAPEILRGED 197
Query: 250 ASEETDIYSFGVIMLELISGKEP---INENPTPDED 282
D ++ GV+M E+++G+ P + + PD++
Sbjct: 198 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 65
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 66 VKLLDVIHTENKLYLVFE--FLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 122
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 123 -HR-VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 179
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK--MKD- 249
I+H +LK +NILLD + ++DFG L+P G+++ + Y APE+I+ M D
Sbjct: 145 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP--GEKLRSVCGTPSYLAPEIIECSMNDN 202
Query: 250 ---ASEETDIYSFGVIMLELISGKEPI 273
+E D++S GVIM L++G P
Sbjct: 203 HPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 38/240 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIE---LLGCIRHPNLVPLLG 133
IG ++G +Y A R+ V ++ + ++++ D+I+ L +RHPN + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----IYRISIGIAGGLDYLHTGF 189
Y L++ Y G+ + + E HK + I ++ G GL YLH+
Sbjct: 83 CYLREHTAWLVME--YCLGSASDLL-----EVHKKPLQEVEIAAVTHGALQGLAYLHS-- 133
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
+IH ++K+ NILL + DFG ++ P + + APE+I D
Sbjct: 134 -HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-----XFVGTPYWMAPEVILAMD 187
Query: 250 ASE---ETDIYSFGVIMLELISGKEP------------INENPTPD-EDFHLPTFMRNAV 293
+ + D++S G+ +EL K P I +N +P + H + RN V
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 71 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 123
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 74 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 67
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + +I + GL + H+
Sbjct: 68 VKLLDVIHTENKLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 124
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 125 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 181
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-----RHPNLVP 130
VIG+ +Y + L+++ + ++ ++ D++ D ++ + HP LV
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDI-DWVQTEKHVFEQASNHPFLVG 70
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L + V + G+L ++ + + Y I +A L+YLH
Sbjct: 71 LHSCFQ-TESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYLH---E 124
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
R II+ +LK N+LLD ++D+G+ L P G + Y APE+++ +D
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--GDTTSXFCGTPNYIAPEILRGED 182
Query: 250 ASEETDIYSFGVIMLELISGKEP---INENPTPDED 282
D ++ GV+M E+++G+ P + + PD++
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN 218
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 71 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 123
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 71 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 123
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 93/203 (45%), Gaps = 12/203 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRP-VCTTRDKEFGDLIE--LLGCIRHPNLVPL 131
+++GK +G + + +G ++ LR V +D+ + E +L RHP L L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 132 LGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
YA ++L V + G L + + + Y I L+YLH+
Sbjct: 71 K--YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHS--- 123
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
R +++ ++K +N++LD++ ++DFGL + G M + Y APE+++ D
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGL-CKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D + GV+M E++ G+ P
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 66
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + +I + GL + H+
Sbjct: 67 VKLLDVIHTENKLYLVFE--FLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 123
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 124 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 180
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 43/308 (13%)
Query: 62 EDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVC--TTRDKEFGDLIEL 119
ED+ I L G+++G+ +G++ + L++ L ++ + + +E + +
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 120 LGCIR---HPNLVPLLGFYAGPRGE----KLIVHPFYKRGNLAQCI---RGGSGEAH-KW 168
C++ HPN++ LLG + +++ PF K G+L + R +G H
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 169 SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAG 227
+ + + IA G++YL +R +H +L ++N +L + V+DFGL + +
Sbjct: 147 QTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY 203
Query: 228 QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPT 287
++ A + A E + + + ++D+++FGV M E+ + P P
Sbjct: 204 RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR----GMTPYP-------- 251
Query: 288 FMRNAVLDHRITD-LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQ 346
V +H + D L H H E+ + + +++ +C P RP
Sbjct: 252 ----GVQNHEMYDYLLH---------GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSV 298
Query: 347 VLWKLEDL 354
+ +LE L
Sbjct: 299 LRLQLEKL 306
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L +R V +T +E I LL + HPN+
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 64
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 65 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 121
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 122 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 178
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L +R V +T +E I LL + HPN+
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 63
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 64 VKLLDVIHTENKLYLVFE--FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 120
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 121 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILLGC 177
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR------PVCTTRDKEFGDLIELLGCIRHPNL 128
E IG+ YG +YKA + +G V L+ +R V +T +E I LL + HPN+
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE----ISLLKELNHPNI 67
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
V LL L+ + +L + + + +I + GL + H+
Sbjct: 68 VKLLDVIHTENKLYLVFE--HVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS- 124
Query: 189 FHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIKM 247
HR ++H +LK +N+L++ ++DFGL E + Y+APE L+
Sbjct: 125 -HR-VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILLGC 181
Query: 248 KDASEETDIYSFGVIMLELISGK 270
K S DI+S G I E+++ +
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 70/281 (24%)
Query: 104 PVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSG 163
P R K+F ELL ++H ++V G G ++V + K G+L + +R
Sbjct: 56 PTLAAR-KDFQREAELLTNLQHEHIVKFYGV-CGDGDPLIMVFEYMKHGDLNKFLRAHGP 113
Query: 164 EAH--------------KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNY 209
+A S + I+ IA G+ YL + + +H +L ++N L+ N
Sbjct: 114 DAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANL 170
Query: 210 QPYVSDFGLHLLLNPT-----AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIML 264
+ DFG+ + T G ML + PE I + + E+D++SFGVI+
Sbjct: 171 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSFGVILW 226
Query: 265 ELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERI 323
E+ + GK+P F L SN+ +++ R+
Sbjct: 227 EIFTYGKQPW---------FQL------------------------SNTEVIECITQGRV 253
Query: 324 L--------KFFQLAMACCSPSPSLRPNIKQVLWKLEDLGK 356
L + + + + C P R NIK++ L LGK
Sbjct: 254 LERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGK 294
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 77 IGKSNYGTLYKALLQRSGSV--RLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+G N G ++K + SG V R L L R++ +L L C N ++GF
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC----NSPYIVGF 72
Query: 135 YAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRP 192
Y GE I G+L Q ++ + I+ ++SI + GL YL
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ--ILGKVSIAVIKGLTYLRE--KHK 128
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE 252
I+H ++K NIL++ + + DFG+ L E + ++ Y +PE ++ S
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHYSV 185
Query: 253 ETDIYSFGVIMLELISGKEP 272
++DI+S G+ ++E+ G+ P
Sbjct: 186 QSDIWSMGLSLVEMAVGRYP 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 11/199 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G +G ++ S V + + L+P T + F + L+ ++H LV L YA
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAV-KTLKP-GTMSVQAFLEEANLMKTLQHDKLVRL---YA 74
Query: 137 GPRGEK--LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
E+ I+ F +G+L ++ G + S IA G+ Y+ + I
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYI 131
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEET 254
H +L++ N+L+ + ++DFGL ++ A + APE I + ++
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 255 DIYSFGVIMLELIS-GKEP 272
+++SFG+++ E+++ GK P
Sbjct: 192 NVWSFGILLYEIVTYGKIP 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH 219
G +G ++ Y + I GL+ LH I++ +LK +NILLD + +SD GL
Sbjct: 279 GQAGFPEARAVFY--AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
Query: 220 LLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
+ + GQ + + GY APE++K + + D ++ G ++ E+I+G+ P +
Sbjct: 334 VHV--PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFG-DLIE---LLGCIRHPNLVP 130
+++GK ++G ++ A +++ ++ L+ D + ++E L HP L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
+ + + V + G+L I+ + Y I + GL +LH+
Sbjct: 84 MFCTFQT-KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL--GLQFLHS--- 137
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ I++ +LK NILLD++ ++DFG+ N + E + Y APE++ +
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGM-CKENMLGDAKTNEFCGTPDYIAPEILLGQKY 196
Query: 251 SEETDIYSFGVIMLELISGKEPIN 274
+ D +SFGV++ E++ G+ P +
Sbjct: 197 NHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E +G + + A + +G + ++ + + ++ + I +L I+H N+V L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
Y P L++ G L I +G E ++I ++ LD ++
Sbjct: 88 IYESPNHLYLVMQ-LVSGGELFDRIVEKGFYTEKDASTLIRQV-------LDAVYYLHRM 139
Query: 192 PIIHGNLKSKNILL---DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMK 248
I+H +LK +N+L D + +SDFGL + G M A + GY APE++ K
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQK 197
Query: 249 DASEETDIYSFGVIMLELISGKEPI-NENPT 278
S+ D +S GVI L+ G P +EN +
Sbjct: 198 PYSKAVDCWSIGVIAYILLCGYPPFYDENDS 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 77 IGKSNYGTLYKAL-LQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHPN 127
IG+ YG ++KA L+ G L+ +R P+ T R+ ++ L HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA---VLRHLETFEHPN 75
Query: 128 LVPLLGFYAGPRGE---KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
+V L R + KL + + +L + I + + GLD+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
LH+ HR ++H +LK +NIL+ + Q ++DFGL + + + + Y+APE+
Sbjct: 136 LHS--HR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 245 IKMKDASEETDIYSFGVIMLELISGK 270
+ + D++S G I E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E +G +G +++ + +G+ +F+ + + I+ + +RHP LV L
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 116
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTGFHRP 192
+ E ++++ F G L + + + E +K S + + GL ++H +
Sbjct: 117 FED-DNEMVMIYEFMSGGELFEKV---ADEHNKMSEDEAVEYMRQVCKGLCHMHENNY-- 170
Query: 193 IIHGNLKSKNILL--DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+H +LK +NI+ R+ + + DFGL L+P ++ +A + APE+ + K
Sbjct: 171 -VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE--FAAPEVAEGKPV 227
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
TD++S GV+ L+SG P
Sbjct: 228 GYYTDMWSVGVLSYILLSGLSPF 250
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 20/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +++A L S V + + L+ DK F + ++++ ++HPN+V L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQ------DKRFKNRELQIMRIVKHPNVVDLKA 99
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS------IIYRISIGIAGGLDYLHT 187
F+ +K V + + + S K +I + L Y+H+
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + DFG +L AG+ + S+ Y+APELI
Sbjct: 160 IG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL--IAGEPNVSXICSRYYRAPELIF 214
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
+ + DI+S G +M EL+ G+
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH 219
G +G ++ Y + I GL+ LH I++ +LK +NILLD + +SD GL
Sbjct: 279 GQAGFPEARAVFY--AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
Query: 220 LLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINE 275
+ + GQ + + GY APE++K + + D ++ G ++ E+I+G+ P +
Sbjct: 334 VHV--PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 62 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 119 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 175
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 235
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 236 CPEELYQL-MRLCWKERPED 254
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 61 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 118 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 235 CPEELYQL-MRLCWKERPED 253
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 70 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 127 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 243
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 244 CPEELYQL-MRLCWKERPED 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 67 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 124 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 241 CPEELYQL-MRLCWKERPED 259
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 63 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 120 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 176
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 236
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 237 CPEELYQL-MRLCWKERPED 255
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 61 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 118 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI 174
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 235 CPEELYQL-MRLCWKERPED 253
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 61 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 118 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 235 CPEELYQL-MRLCWKERPED 253
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E IG+ YG +YKA G L+ +R P T R+ I +L ++H
Sbjct: 8 EKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIRE------ISILKELKHS 60
Query: 127 NLVPLLGFYAGPRGEKLIV-HPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYL 185
N+V L + L+ H L GG S + ++ GIA Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YC 116
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-L 244
H R ++H +LK +N+L++R + ++DFGL + E + Y+AP+ L
Sbjct: 117 HD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV-VTLWYRAPDVL 172
Query: 245 IKMKDASEETDIYSFGVIMLELISG 269
+ K S DI+S G I E+++G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E IG+ YG +YKA G L+ +R P T R+ I +L ++H
Sbjct: 8 EKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIRE------ISILKELKHS 60
Query: 127 NLVPLLGFYAGPRGEKLIV-HPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYL 185
N+V L + L+ H L GG S + ++ GIA Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YC 116
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-L 244
H R ++H +LK +N+L++R + ++DFGL + E + Y+AP+ L
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV-VTLWYRAPDVL 172
Query: 245 IKMKDASEETDIYSFGVIMLELISG 269
+ K S DI+S G I E+++G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 118 ELLGC--IRHPNLVPLLG-FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRI 174
EL+ C + P +VPL G GP I + G+L Q ++ ++ Y
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVN--IFMELLEGGSLGQLVKEQGCLPEDRALYY-- 171
Query: 175 SIGIA-GGLDYLHTGFHRPIIHGNLKSKNILLDRN-YQPYVSDFGLHLLLNPTA-GQEML 231
+G A GL+YLH+ R I+HG++K+ N+LL + + DFG + L P G+++L
Sbjct: 172 -LGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 232 EAS---ASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINE 275
++ + APE++ + + D++S +ML +++G P +
Sbjct: 228 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 85 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 135
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFG LL G E E A G
Sbjct: 136 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAEGGKVPIK 188
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 231
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 77 IGKSNYGTLYKAL-LQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHPN 127
IG+ YG ++KA L+ G L+ +R P+ T R+ ++ L HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA---VLRHLETFEHPN 75
Query: 128 LVPLLGFYAGPRGE---KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
+V L R + KL + + +L + I + + GLD+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
LH+ HR ++H +LK +NIL+ + Q ++DFGL + + + + Y+APE+
Sbjct: 136 LHS--HR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 245 IKMKDASEETDIYSFGVIMLELISGK 270
+ + D++S G I E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+ +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 88 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 138
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 139 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 191
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E +G +G +++ + +G+ +F+ + + I+ + +RHP LV L
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA 222
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI--GIAGGLDYLHTGFHRP 192
+ E ++++ F G L + + + E +K S + + GL ++H +
Sbjct: 223 FED-DNEMVMIYEFMSGGELFEKV---ADEHNKMSEDEAVEYMRQVCKGLCHMHENNY-- 276
Query: 193 IIHGNLKSKNILL--DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+H +LK +NI+ R+ + + DFGL L+P ++ +A + APE+ + K
Sbjct: 277 -VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE--FAAPEVAEGKPV 333
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
TD++S GV+ L+SG P
Sbjct: 334 GYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 69 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 126 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 242
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 243 CPEELYQL-MRLCWKERPED 261
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 75 EVIGK-SNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLVP 130
E+IG+ ++G +YKA ++ +L + + T ++E D I++L HPN+V
Sbjct: 15 EIIGELGDFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 71
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII--------YRISIGIAGGL 182
LL FY NL I +G A ++ +I + L
Sbjct: 72 LLD-------------AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTL 118
Query: 183 DYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAP 242
D L+ IIH +LK+ NIL + ++DFG+ T Q + + AP
Sbjct: 119 DALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
Query: 243 ELIKMKDASE-----ETDIYSFGVIMLELISGKEPINE-NP 277
E++ + + + + D++S G+ ++E+ + P +E NP
Sbjct: 179 EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 219
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFL---------RPVCTTRDKEFGDLIELLGCIR 124
GE +G + + K + +G +F+ R VC +E + +L +
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCR---EEIEREVSILRQVL 73
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGL 182
HPN++ L Y R + +++ G L + + E S I +I G+
Sbjct: 74 HPNIITLHDVYEN-RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGV 128
Query: 183 DYLHTGFHRPIIHGNLKSKNI-LLDRNYQ-PYVS--DFGLHLLLNPTAGQEMLEASASQG 238
+YLHT + I H +LK +NI LLD+N P++ DFGL + G E +
Sbjct: 129 NYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPE 183
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
+ APE++ + E D++S GVI L+SG P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I LDYLH+ + +++ +LK +N++LD++ ++DFGL G M +
Sbjct: 260 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL-CKEGIKDGATMKTFCGTP 316
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+++ D D + GV+M E++ G+ P
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 83 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFG LL G E E A G
Sbjct: 134 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAEGGKVPIK 186
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + ++ + PF G L +R GS W + IA G++
Sbjct: 83 RLLGICLTSTVQLIMQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFG LL G E E A G
Sbjct: 134 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAEGGKVPIK 186
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I LDYLH+ + +++ +LK +N++LD++ ++DFGL G M +
Sbjct: 257 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL-CKEGIKDGATMKTFCGTP 313
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+++ D D + GV+M E++ G+ P
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 77 IGKSNYGTLYKAL-LQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHPN 127
IG+ YG ++KA L+ G L+ +R P+ T R+ ++ L HPN
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA---VLRHLETFEHPN 75
Query: 128 LVPLLGFYAGPRGE---KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDY 184
+V L R + KL + + +L + I + + GLD+
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
LH+ HR ++H +LK +NIL+ + Q ++DFGL + + + + Y+APE+
Sbjct: 136 LHS--HR-VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 245 IKMKDASEETDIYSFGVIMLELISGK 270
+ + D++S G I E+ K
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 61 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 118 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 174
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 235 CPEELYQL-MRLCWKERPED 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----EKLIVHPFYKRGNLAQCIRGGS 162
T + + +L+ LL C+ H N++ LL + + + + + NL Q I
Sbjct: 63 THAKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL 121
Query: 163 GEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL 222
++Y++ GI +LH+ IIH +LK NI++ + + DFGL
Sbjct: 122 DHERMSYLLYQMLCGI----KHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL--AR 172
Query: 223 NPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISG 269
+ M ++ Y+APE+I E DI+S G IM EL+ G
Sbjct: 173 TASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 66 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 123 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 179
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 240 CPEELYQL-MRLCWKERPED 258
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 104/245 (42%), Gaps = 18/245 (7%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G +G ++ A + V ++ ++P + + + ++ ++H LV L
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAE-ANVMKTLQHDKLVKLHAVVT 247
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHG 196
+ I+ F +G+L ++ G + S IA G+ ++ R IH
Sbjct: 248 --KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHR 302
Query: 197 NLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDI 256
+L++ NIL+ + ++DFGL + A + APE I + ++D+
Sbjct: 303 DLRAANILVSASLVCKIADFGL----------ARVGAKFPIKWTAPEAINFGSFTIKSDV 352
Query: 257 YSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHE 315
+SFG++++E+++ G+ P P+ L R ++ +LY+ M N E
Sbjct: 353 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEE 412
Query: 316 NPVSE 320
P E
Sbjct: 413 RPTFE 417
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 67 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 124 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 180
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 241 CPEELYQL-MRLCWKERPED 259
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 10/131 (7%)
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLHTGF-------HRPIIHGNLKSKNILLDRNYQPY 212
G G HK+ + R I ++ + LH + +H NL ++N+LL +
Sbjct: 417 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAK 476
Query: 213 VSDFGLHLLLNPTAGQEMLEASASQGYK--APELIKMKDASEETDIYSFGVIMLELIS-G 269
+SDFGL L ++ K APE I + S +D++S+GV M E +S G
Sbjct: 477 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 536
Query: 270 KEPINENPTPD 280
++P + P+
Sbjct: 537 QKPYKKMKGPE 547
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I LDYLH+ + +++ +LK +N++LD++ ++DFGL G M +
Sbjct: 117 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL-CKEGIKDGATMKXFCGTP 173
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+++ D D + GV+M E++ G+ P
Sbjct: 174 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E IG+ YG +YKA G L+ +R P T R+ I +L ++H
Sbjct: 8 EKIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIRE------ISILKELKHS 60
Query: 127 NLVPLLGFYAGPRGEKLIV-HPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYL 185
N+V L + L+ H L GG S + ++ GIA Y
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YC 116
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-L 244
H R ++H +LK +N+L++R + ++DFGL + E + Y+AP+ L
Sbjct: 117 H---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI-VTLWYRAPDVL 172
Query: 245 IKMKDASEETDIYSFGVIMLELISG 269
+ K S DI+S G I E+++G
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I LDYLH+ + +++ +LK +N++LD++ ++DFGL G M +
Sbjct: 119 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL-CKEGIKDGATMKXFCGTP 175
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+++ D D + GV+M E++ G+ P
Sbjct: 176 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 56 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 113 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 169
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 229
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 230 CPEELYQL-MRLCWKERPED 248
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I LDYLH+ + +++ +LK +N++LD++ ++DFGL G M +
Sbjct: 118 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGL-CKEGIKDGATMKXFCGTP 174
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+++ D D + GV+M E++ G+ P
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 17/167 (10%)
Query: 118 ELLGC--IRHPNLVPLLG-FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRI 174
EL+ C + P +VPL G GP I + G+L Q ++ ++ Y
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVN--IFMELLEGGSLGQLVKEQGCLPEDRALYY-- 190
Query: 175 SIGIA-GGLDYLHTGFHRPIIHGNLKSKNILLDRN-YQPYVSDFGLHLLLNPTA-GQEML 231
+G A GL+YLH+ R I+HG++K+ N+LL + + DFG + L P G+ +L
Sbjct: 191 -LGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 232 EAS---ASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINE 275
++ + APE++ + + D++S +ML +++G P +
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 13/205 (6%)
Query: 77 IGKSNYGTLYKAL-LQRSGSVRLLRFL-RPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
IG+ ++ T+YK L + + V R + + + F + E L ++HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 135 YAGP-RGEKLIV--HPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
+ +G+K IV G L ++ + K ++ I GL +LHT
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLK--RFKVXKIKVLRSWCRQILKGLQFLHTRTP- 150
Query: 192 PIIHGNLKSKNILLDR-NYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
PIIH +LK NI + + D GL L + + ++ + + APE + K
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI---GTPEFXAPEXYEEK-Y 206
Query: 251 SEETDIYSFGVIMLELISGKEPINE 275
E D+Y+FG LE + + P +E
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPT-AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 24/234 (10%)
Query: 49 EGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTL----YKALLQRSGSVRLLRFLRP 104
EG + L G +DL + E +G ++G + + A ++ SV ++ L+P
Sbjct: 5 EGPLQSLTCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKP 56
Query: 105 VCTTRDKEFGDLIELLGCIR---HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGG 161
++ + D I + + H NL+ L G P + +V G+L +R
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKH 114
Query: 162 SGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLL 221
G + R ++ +A G+ YL + + IH +L ++N+LL + DFGL
Sbjct: 115 QGH-FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170
Query: 222 LNPTAGQEMLEA--SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
L +++ + APE +K + S +D + FGV + E+ + G+EP
Sbjct: 171 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+ +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 81 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 77 IGKSNYGTLYKALLQRSG-SVRLLRFLRPVCTT-RDKEFGDLIELLGCIRHPNLVPLLGF 134
+G YG++ + +SG + + + RP + K + LL ++H N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 135 YAGPRGEK------LIVHPF-YKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ + L+ H N+ +C + + H +IY+I GL Y+H+
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQK--LTDDHVQFLIYQI----LRGLKYIHS 172
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
IIH +LK N+ ++ + + + DFG L EM A++ Y+APE ++
Sbjct: 173 A---DIIHRDLKPSNLAVNEDCELKILDFG----LARHTDDEMTGYVATRWYRAPEIMLN 225
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
+ DI+S G IM EL++G+
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+ +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 88 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 138
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFGL LL G E E A G
Sbjct: 139 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL----GAEEKEYHAEGGKVPIK 191
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 81 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 131
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFG LL G E E A G
Sbjct: 132 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAEGGKVPIK 184
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 83 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 133
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFG LL G E E A G
Sbjct: 134 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAEGGKVPIK 186
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 86 YKALLQRSGSVRLLRFLRPVC--TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG--- 140
Y A+L R+ +++ L RP T + + +L+ L+ + H N++ LL + +
Sbjct: 44 YDAVLDRNVAIKKLS--RPFQNQTHAKRAYRELV-LMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 141 -EKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLK 199
+ + + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 101 FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLK 153
Query: 200 SKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIY 257
NI++ + + DFGL TAG M ++ Y+APE+I E DI+
Sbjct: 154 PSNIVVKSDXTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 258 SFGVIMLELISGK 270
S G IM E++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 33/223 (14%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK L G V++ ++ LR + + +KE D ++ + +P++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 130 PLLGFYAGPRGEKLI-VHPFYKRGNLAQCIRG-----GSGEAHKWSIIYRISIGIAGGLD 183
LLG + + + PF G L +R GS W + IA G++
Sbjct: 88 RLLGICLTSTVQLITQLMPF---GCLLDYVREHKDNIGSQYLLNWCV------QIAKGMN 138
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG----- 238
YL R ++H +L ++N+L+ ++DFG LL G E E A G
Sbjct: 139 YLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL----GAEEKEYHAEGGKVPIK 191
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPD 280
+ A E I + + ++D++S+GV + EL++ G +P + P +
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 234
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIITLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 76 VIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLV 129
++GK ++G + K + Q+ +V+++ + ++K+ + +ELL + HPN++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN----KASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNL-AQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
L IV Y G L + I+ H + RI + G+ Y+H
Sbjct: 85 KLFEILEDS-SSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMH-- 138
Query: 189 FHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
I+H +LK +NILL+ ++ + DFGL +M + + Y APE++
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVL 195
Query: 246 KMKDASEETDIYSFGVIMLELISGKEP 272
+ E+ D++S GVI+ L+SG P
Sbjct: 196 R-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 119 LLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG 177
L+ ++H LV L YA E + I+ + + G+L ++ SG + + ++
Sbjct: 71 LMKQLQHQRLVRL---YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA G+ ++ R IH +L++ NIL+ ++DFGL L+ A
Sbjct: 128 IAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ APE I + ++D++SFG+++ E+++ G+ P P+ +L R D+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 244
Query: 297 RITDLYHPDMLLCSNSNHEN 316
+LY M LC E+
Sbjct: 245 CPEELYQL-MRLCWKERPED 263
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 86 YKALLQRSGSVRLLRFLRPVC--TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG--- 140
Y A+L R+ +++ L RP T + + +L+ L+ + H N++ LL + +
Sbjct: 44 YDAVLDRNVAIKKLS--RPFQNQTHAKRAYRELV-LMKXVNHKNIISLLNVFTPQKTLEE 100
Query: 141 -EKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLK 199
+ + + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 101 FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIK----HLHSA---GIIHRDLK 153
Query: 200 SKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIY 257
NI++ + + DFGL TAG M ++ Y+APE+I E DI+
Sbjct: 154 PSNIVVKSDXTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Query: 258 SFGVIMLELISGK 270
S G IM E++ K
Sbjct: 210 SVGCIMGEMVRHK 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 41/188 (21%)
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLE 232
S +A G+++L + R IH +L ++NILL N + DFGL + NP ++ +
Sbjct: 205 SFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG-D 260
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLP 286
+ APE I K S ++D++S+GV++ E+ S + +P P DEDF L
Sbjct: 261 TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS----LGGSPYPGVQMDEDFCSRLR 316
Query: 287 TFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQ 346
MR ++ ++Y Q+ + C P RP +
Sbjct: 317 EGMRMRAPEYSTPEIY-------------------------QIMLDCWHRDPKERPRFAE 351
Query: 347 VLWKLEDL 354
++ KL DL
Sbjct: 352 LVEKLGDL 359
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A ++ SG + ++ + R + + + ++ +H N+V + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
G++L +V F + G L + + I + + + L LH + +IH
Sbjct: 88 V--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IAAVCLAVLQALSVLHA---QGVIH 139
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APELI E D
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-XLVGTPYWMAPELISRLPYGPEVD 198
Query: 256 IYSFGVIMLELISGKEP-INENP 277
I+S G++++E++ G+ P NE P
Sbjct: 199 IWSLGIMVIEMVDGEPPYFNEPP 221
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G+ YG + K SG + ++ +R +++++ L++L +R + + FY
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYG 73
Query: 137 GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKW-------------SIIYRISIGIAGGLD 183
++ G++ C+ K+ I+ +I++ I L+
Sbjct: 74 A----------LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+LH+ +IH ++K N+L++ Q + DFG+ L +++ + + Y APE
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI--DAGCKPYMAPE 179
Query: 244 LIK----MKDASEETDIYSFGVIMLELISGKEPINENPTP 279
I K S ++DI+S G+ M+EL + P + TP
Sbjct: 180 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 219
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 30/168 (17%)
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
G+ YLH +IH +LK N+ L+ + + DFGL + G+ + + Y
Sbjct: 138 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKDLCGTPNYI 193
Query: 241 APELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITD 300
APE++ K S E DI+S G I+ L+ GK P + + T++R ++ +
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE------TYIRIKKNEYSV-- 245
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
H NPV+ I + P+LRP++ ++L
Sbjct: 246 -----------PRHINPVASALIRRMLH-------ADPTLRPSVAELL 275
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVAYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A ++ SG + ++ + R + + + ++ +H N+V + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
G++L +V F + G L + + I + + + L LH + +IH
Sbjct: 97 V--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IAAVCLAVLQALSVLHA---QGVIH 148
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APELI E D
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-XLVGTPYWMAPELISRLPYGPEVD 207
Query: 256 IYSFGVIMLELISGKEP-INENP 277
I+S G++++E++ G+ P NE P
Sbjct: 208 IWSLGIMVIEMVDGEPPYFNEPP 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 24/234 (10%)
Query: 49 EGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTL----YKALLQRSGSVRLLRFLRP 104
EG + L G +DL + E +G ++G + + A ++ SV ++ L+P
Sbjct: 5 EGPLQSLTCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKP 56
Query: 105 VCTTRDKEFGDLIELLGCIR---HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGG 161
++ + D I + + H NL+ L G P + +V G+L +R
Sbjct: 57 DVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKH 114
Query: 162 SGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLL 221
G + R ++ +A G+ YL + + IH +L ++N+LL + DFGL
Sbjct: 115 QGH-FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170
Query: 222 LNPTAGQEMLEA--SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
L +++ + APE +K + S +D + FGV + E+ + G+EP
Sbjct: 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Query: 86 YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----E 141
Y A+L R+ +++ L T + + +L+ L+ + H N++ LL + + +
Sbjct: 44 YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV-LMKXVNHKNIISLLNVFTPQKTLEEFQ 102
Query: 142 KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSK 201
+ + NL Q I+ ++Y++ GI +LH+ IIH +LK
Sbjct: 103 DVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK----HLHSA---GIIHRDLKPS 155
Query: 202 NILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASASQGYKAPELIKMKDASEETDIYSF 259
NI++ + + DFGL TAG M ++ Y+APE+I E DI+S
Sbjct: 156 NIVVKSDXTLKILDFGL----ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 260 GVIMLELISGK 270
G IM E++ K
Sbjct: 212 GCIMGEMVRHK 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKL----IVHPFYKRGNLAQCIRGGSGEAHKWSIIY 172
I++L RH N++ + P E++ IV + H +Y
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 173 RISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--M 230
+I GL Y+H+ ++H +LK N+LL+ + DFGL + +P +
Sbjct: 134 QI----LRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 186
Query: 231 LEASASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
E A++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKL----IVHPFYKRGNLAQCIRGGSGEAHKWSIIY 172
I++L RH N++ + P E++ IV + H +Y
Sbjct: 74 IKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY 133
Query: 173 RISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--M 230
+I GL Y+H+ ++H +LK N+LL+ + DFGL + +P +
Sbjct: 134 QI----LRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFL 186
Query: 231 LEASASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
E A++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 187 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 63 DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGC 122
DL ++ + GE +G +G +YKA + +G++ + + +++ IE+L
Sbjct: 14 DLDPNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT 72
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIR---GGSGEAHKWSI--------I 171
HP +V LLG Y Y G L I GG+ +A + I
Sbjct: 73 CDHPYIVKLLGAY-------------YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 119
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
+ + L++LH+ + IIH +LK+ N+L+ ++DFG+ N Q+
Sbjct: 120 QVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRD 175
Query: 232 EASASQGYKAPELI---KMKDA--SEETDIYSFGVIMLELISGKEPINE-NP 277
+ + APE++ MKD + DI+S G+ ++E+ + P +E NP
Sbjct: 176 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 227
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKE---FGDLIELLGCIRHPNLVPL 131
+VIG+ +G + + + V ++ L + + F + +++ P +V L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT-GFH 190
FYA L + Y G + KW+ Y + +A LD +H+ GF
Sbjct: 140 --FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA--LDAIHSMGF- 194
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IH ++K N+LLD++ ++DFG + +N A + Y +PE++K +
Sbjct: 195 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 251 S----EETDIYSFGVIMLELISGKEPI 273
E D +S GV + E++ G P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 35/232 (15%)
Query: 63 DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGC 122
DL ++ + GE +G +G +YKA + +G++ + + +++ IE+L
Sbjct: 6 DLDPNEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT 64
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIR---GGSGEAHKWSI--------I 171
HP +V LLG Y Y G L I GG+ +A + I
Sbjct: 65 CDHPYIVKLLGAY-------------YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI 111
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
+ + L++LH+ + IIH +LK+ N+L+ ++DFG+ N Q+
Sbjct: 112 QVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRD 167
Query: 232 EASASQGYKAPELI---KMKDA--SEETDIYSFGVIMLELISGKEPINE-NP 277
+ + APE++ MKD + DI+S G+ ++E+ + P +E NP
Sbjct: 168 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A ++ SG + ++ + R + + + ++ +H N+V + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
G++L +V F + G L + + I + + + L LH + +IH
Sbjct: 92 V--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IAAVCLAVLQALSVLHA---QGVIH 143
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APELI E D
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-XLVGTPYWMAPELISRLPYGPEVD 202
Query: 256 IYSFGVIMLELISGKEP-INENP 277
I+S G++++E++ G+ P NE P
Sbjct: 203 IWSLGIMVIEMVDGEPPYFNEPP 225
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKE---FGDLIELLGCIRHPNLVPL 131
+VIG+ +G + + + V ++ L + + F + +++ P +V L
Sbjct: 75 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT-GFH 190
FYA L + Y G + KW+ Y + +A LD +H+ GF
Sbjct: 135 --FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA--LDAIHSMGF- 189
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IH ++K N+LLD++ ++DFG + +N A + Y +PE++K +
Sbjct: 190 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 246
Query: 251 S----EETDIYSFGVIMLELISGKEPI 273
E D +S GV + E++ G P
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 56 VTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKE 112
VTF G++ I E IG YG + A + +G +++ + V T +
Sbjct: 48 VTFDVGDEYEII-------ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 113 FGDLIELLGCIRHPNLVPLLGFY--AGPRGEKLIVHPFYK--RGNLAQCIRGGSGEA--H 166
+L ++L +H N++ + P GE V+ +L Q I H
Sbjct: 101 LREL-KILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEH 159
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH--LLLNP 224
+Y++ GL Y+H+ +IH +LK N+L++ N + + DFG+ L +P
Sbjct: 160 VRYFLYQL----LRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
Query: 225 TAGQE-MLEASASQGYKAPEL-IKMKDASEETDIYSFGVIMLELISGKE 271
Q M E A++ Y+APEL + + + ++ D++S G I E+++ ++
Sbjct: 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+ +++ G L+K Q + V + +R T + ++F + L HPN++P+LG
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQ 77
Query: 137 GPRG--EKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
P LI H + G+L + G+ S + ++ A G +LHT P+I
Sbjct: 78 SPPAPHPTLITH-WXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHT--LEPLI 134
Query: 195 -HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDAS-- 251
L S+++ +D + +S + + G+ A + APE ++ K
Sbjct: 135 PRHALNSRSVXIDEDXTARISXADVKFSFQ-SPGRXYAPA-----WVAPEALQKKPEDTN 188
Query: 252 -EETDIYSFGVIMLELISGKEPINE 275
D +SF V++ EL++ + P +
Sbjct: 189 RRSADXWSFAVLLWELVTREVPFAD 213
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
+G+ YG + K SG + ++ +R +++++ L++L +R + + FY
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK-RLLMDLDISMRTVDCPFTVTFYG 117
Query: 137 GPRGEKLIVHPFYKRGNLAQCIR-------------GGSGEAHKWSIIYRISIGIAGGLD 183
++ G++ C+ G+ I+ +I++ I L+
Sbjct: 118 A----------LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+LH+ +IH ++K N+L++ Q + DFG+ L + + + + + Y APE
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI--DAGCKPYMAPE 223
Query: 244 LIK----MKDASEETDIYSFGVIMLELISGKEPINENPTP 279
I K S ++DI+S G+ M+EL + P + TP
Sbjct: 224 RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP 263
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A ++ SG + ++ + R + + + ++ +H N+V + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
G++L +V F + G L + + I + + + L LH + +IH
Sbjct: 99 V--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IAAVCLAVLQALSVLHA---QGVIH 150
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APELI E D
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-XLVGTPYWMAPELISRLPYGPEVD 209
Query: 256 IYSFGVIMLELISGKEP-INENP 277
I+S G++++E++ G+ P NE P
Sbjct: 210 IWSLGIMVIEMVDGEPPYFNEPP 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKE---FGDLIELLGCIRHPNLVPL 131
+VIG+ +G + + + V ++ L + + F + +++ P +V L
Sbjct: 80 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT-GFH 190
FYA L + Y G + KW+ Y + +A LD +H+ GF
Sbjct: 140 --FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA--LDAIHSMGF- 194
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IH ++K N+LLD++ ++DFG + +N A + Y +PE++K +
Sbjct: 195 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 251 S----EETDIYSFGVIMLELISGKEPI 273
E D +S GV + E++ G P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 30/168 (17%)
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
G+ YLH +IH +LK N+ L+ + + DFGL + G+ + + Y
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKDLCGTPNYI 209
Query: 241 APELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITD 300
APE++ K S E DI+S G I+ L+ GK P + + T++R ++ +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE------TYIRIKKNEYSV-- 261
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
H NPV+ I + P+LRP++ ++L
Sbjct: 262 -----------PRHINPVASALIRRMLHA-------DPTLRPSVAELL 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRD----KEFGDLIELLGCIRHPN 127
GE +G + + K + +G +F+ R + ++R +E + +L IRHPN
Sbjct: 17 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
++ L + + + +++ G L + E+ + I G+ YLH+
Sbjct: 77 IITLHDIFEN-KTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 188 GFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+ I H +LK +NI LLD+N P + DFG+ + AG E + + APE
Sbjct: 134 ---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE--AGNEFKNIFGTPEFVAPE 188
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEP 272
++ + E D++S GVI L+SG P
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 68 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 126
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLTARNVLVTENNVM 183
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 243
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 244 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 278
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 279 MRDCWHAVPSQRPTFKQL---VEDLDR 302
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRD----KEFGDLIELLGCIRHPN 127
GE +G + + K + +G +F+ R + ++R +E + +L IRHPN
Sbjct: 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
++ L + + + +++ G L + E+ + I G+ YLH+
Sbjct: 70 IITLHDIFEN-KTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 188 GFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+ I H +LK +NI LLD+N P + DFG+ + AG E + + APE
Sbjct: 127 ---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE--AGNEFKNIFGTPEFVAPE 181
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEP 272
++ + E D++S GVI L+SG P
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 127 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 242
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 302
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 303 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 337
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 338 MRDCWHAVPSQRPTFKQL---VEDLDR 361
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 73 EKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLRARRPPG 131
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 188
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 248
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 249 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 283
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 284 MRDCWHAVPSQRPTFKQL---VEDLDR 307
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 70 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 128
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 185
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 245
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 246 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 280
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 281 MRDCWHAVPSQRPTFKQL---VEDLDR 304
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 75 EVIGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVP 130
+VIG+ +G + +KA Q+ +++LL + + F + +++ P +V
Sbjct: 81 KVIGRGAFGEVQLVRHKAS-QKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L + + +++ Y G + KW+ Y + +A LD +H+
Sbjct: 140 LFCAFQDDKYLYMVME--YMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA--LDAIHS--- 192
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+IH ++K N+LLD++ ++DFG + ++ T A + Y +PE++K +
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGG 252
Query: 251 S----EETDIYSFGVIMLELISGKEPI 273
E D +S GV + E++ G P
Sbjct: 253 DGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 76 VIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLV 129
++GK ++G + K + Q+ +V+++ + ++K+ + +ELL + HPN++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN----KASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNL-AQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
L IV Y G L + I+ H + RI + G+ Y+H
Sbjct: 85 KLFEILEDS-SSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMH-- 138
Query: 189 FHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
I+H +LK +NILL+ ++ + DFGL +M + + Y APE++
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVL 195
Query: 246 KMKDASEETDIYSFGVIMLELISGKEP 272
+ E+ D++S GVI+ L+SG P
Sbjct: 196 R-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 117 IELLGCIRHPNLVPLLGFYA--GPRGEKLIVHPFYKRGNLAQCIRGGSGEAH-KWSIIYR 173
IE+L + H N+V G G G KLI+ F G+L + + + + K + Y
Sbjct: 62 IEILRNLYHENIVKYKGICTEDGGNGIKLIME-FLPSGSLKEYLPKNKNKINLKQQLKY- 119
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-- 231
++ I G+DYL + R +H +L ++N+L++ +Q + DFGL + +
Sbjct: 120 -AVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 175
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS 268
+ + + APE + +D++SFGV + EL++
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIIHLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 24/207 (11%)
Query: 76 VIGKSNYGTLYKA---LLQRSGSVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPNLV 129
++GK ++G + K + Q+ +V+++ + ++K+ + +ELL + HPN++
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN----KASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNL-AQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
L IV Y G L + I+ H + RI + G+ Y+H
Sbjct: 85 KLFEILEDS-SSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITYMH-- 138
Query: 189 FHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
I+H +LK +NILL+ ++ + DFGL +M + + Y APE++
Sbjct: 139 -KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--KMKDRIGTAYYIAPEVL 195
Query: 246 KMKDASEETDIYSFGVIMLELISGKEP 272
+ E+ D++S GVI+ L+SG P
Sbjct: 196 R-GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 117 IELLGCIRHPNLVPLLGFYA--GPRGEKLIVHPFYKRGNLAQCIRGGSGEAH-KWSIIYR 173
IE+L + H N+V G G G KLI+ F G+L + + + + K + Y
Sbjct: 74 IEILRNLYHENIVKYKGICTEDGGNGIKLIME-FLPSGSLKEYLPKNKNKINLKQQLKY- 131
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-- 231
++ I G+DYL + R +H +L ++N+L++ +Q + DFGL + +
Sbjct: 132 -AVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD 187
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS 268
+ + + APE + +D++SFGV + EL++
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLH--LLLNPTAGQE-MLEASASQ 237
GL Y+H+ +IH +LK N+L++ N + + DFG+ L +P Q M E A++
Sbjct: 171 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 238 GYKAPEL-IKMKDASEETDIYSFGVIMLELISGKE 271
Y+APEL + + + ++ D++S G I E+++ ++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS--A 235
+A LD+LH+ II+ +LK +NILLD ++DFGL + E S
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFCG 188
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
+ Y APE++ + ++ D +SFGV+M E+++G P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGS--- 162
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 163 -----------GEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
E + + + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPT-AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 93/204 (45%), Gaps = 11/204 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFG-DLIE---LLGCIRHPNLVP 130
+++GK ++G ++ A +++ ++ L+ D + ++E L HP L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
+ + + V + G+L I+ + Y I + GL +LH+
Sbjct: 83 MFCTFQT-KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL--GLQFLHS--- 136
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ I++ +LK NILLD++ ++DFG+ N + + Y APE++ +
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGM-CKENMLGDAKTNXFCGTPDYIAPEILLGQKY 195
Query: 251 SEETDIYSFGVIMLELISGKEPIN 274
+ D +SFGV++ E++ G+ P +
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS--A 235
+A LD+LH+ II+ +LK +NILLD ++DFGL + E S
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFCG 189
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
+ Y APE++ + ++ D +SFGV+M E+++G P
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 77 IGKSNYGTLYKA-----LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+G+ +G ++ A L ++ + ++ L+ + ++F ELL ++H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS-------------IIYRISIGI 178
G R L+V + + G+L + +R +A + + ++ +
Sbjct: 86 FGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 179 AGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEA 233
A G+ YL G H +H +L ++N L+ + + DFG+ + T G+ ML
Sbjct: 145 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
+ PE I + + E+D++SFGV++ E+ + GK+P
Sbjct: 202 R----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 138 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS--A 235
+A LD+LH+ II+ +LK +NILLD ++DFGL + E S
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLS---KESIDHEKKAYSFCG 188
Query: 236 SQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
+ Y APE++ + ++ D +SFGV+M E+++G P
Sbjct: 189 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 139 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 130 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGS--GEAHKWSIIYRI 174
IE+L + HPN++ + + IV + G L + I G+A + +
Sbjct: 71 IEVLKSLDHPNIIKIFEVFEDYHN-MYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPY----VSDFGLHLLLNPTAGQEM 230
+ L Y H+ + ++H +LK +NIL ++ P+ + DFGL L + +
Sbjct: 130 MKQMMNALAYFHS---QHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFK--SDEHS 183
Query: 231 LEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
A+ + Y APE+ K +D + + DI+S GV+M L++G P
Sbjct: 184 TNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFT 226
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A ++ SG + ++ + R + + + ++ +H N+V + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
G++L +V F + G L + + I + + + L LH + +IH
Sbjct: 142 V--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IAAVCLAVLQALSVLHA---QGVIH 193
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APELI E D
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-XLVGTPYWMAPELISRLPYGPEVD 252
Query: 256 IYSFGVIMLELISGKEP-INENP 277
I+S G++++E++ G+ P NE P
Sbjct: 253 IWSLGIMVIEMVDGEPPYFNEPP 275
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 77 IGKSNYGTLYKA-----LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+G+ +G ++ A L ++ + ++ L+ + ++F ELL ++H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS-------------IIYRISIGI 178
G R L+V + + G+L + +R +A + + ++ +
Sbjct: 80 FGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 179 AGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEA 233
A G+ YL G H +H +L ++N L+ + + DFG+ + T G+ ML
Sbjct: 139 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
+ PE I + + E+D++SFGV++ E+ + GK+P
Sbjct: 196 R----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 131 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 141 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 133 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+LL+ + DFGL + +P + E A
Sbjct: 135 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A ++ SG + ++ + R + + + ++ +H N+V + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
G++L +V F + G L + + I + + + L LH + +IH
Sbjct: 219 V--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IAAVCLAVLQALSVLHA---QGVIH 270
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APELI E D
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK-XLVGTPYWMAPELISRLPYGPEVD 329
Query: 256 IYSFGVIMLELISGKEP-INENP 277
I+S G++++E++ G+ P NE P
Sbjct: 330 IWSLGIMVIEMVDGEPPYFNEPP 352
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N + + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 10/207 (4%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLR--PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
IG +YG K + G + + + L + + + LL ++HPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKW--SIIYRISIGIAGGLDYLHT--- 187
L IV + + G+LA I G+ E + R+ + L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
G H ++H +LK N+ LD + DFGL +LN E + Y +PE +
Sbjct: 133 GGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK-EFVGTPYYMSPEQMNR 190
Query: 248 KDASEETDIYSFGVIMLELISGKEPIN 274
+E++DI+S G ++ EL + P
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EKDLSDLVSEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVGYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 14/167 (8%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRG----EKLIVHPFYKRGNLAQCIRGGS 162
T + + +L+ LL C+ H N++ LL + + + + + NL Q I
Sbjct: 65 THAKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMEL 123
Query: 163 GEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL 222
++Y++ GI +LH+ IIH +LK NI++ + + DFGL
Sbjct: 124 DHERMSYLLYQMLCGI----KHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL--AR 174
Query: 223 NPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISG 269
M ++ Y+APE+I + DI+S G IM EL+ G
Sbjct: 175 TACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 16/210 (7%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLR--PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
IG +YG K + G + + + L + + + LL ++HPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKW--SIIYRISIGIAGGLDYLHT--- 187
L IV + + G+LA I G+ E + R+ + L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPEL 244
G H ++H +LK N+ LD + DFGL +LN + A A G Y +PE
Sbjct: 133 GGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILN----HDTSFAKAFVGTPYYMSPEQ 187
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPIN 274
+ +E++DI+S G ++ EL + P
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRDKE-FGDLIELLGCIRHPNLVPLL 132
V+GK ++G + + +G ++ + R V DKE ++LL + HPN+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 133 GFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
F+ +G +V Y G L I R E II ++ GI Y H
Sbjct: 93 EFFE-DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT----YXHKN-- 145
Query: 191 RPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
I+H +LK +N+LL+ ++ + DFGL A ++ + + Y APE++
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE--ASKKXKDKIGTAYYIAPEVLHG 202
Query: 248 KDASEETDIYSFGVIMLELISGKEPIN 274
E+ D++S GVI+ L+SG P N
Sbjct: 203 T-YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
G+ YLH +IH +LK N+ L+ + + DFGL + G+ + Y
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKTLCGTPNYI 209
Query: 241 APELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITD 300
APE++ K S E DI+S G I+ L+ GK P + + T++R ++ +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE------TYIRIKKNEYSV-- 261
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
H NPV+ I + P+LRP++ ++L
Sbjct: 262 -----------PRHINPVASALIRRMLHA-------DPTLRPSVAELL 291
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 10/131 (7%)
Query: 160 GGSGEAHKWSIIYRISIGIAGGLDYLH---TGF----HRPIIHGNLKSKNILLDRNYQPY 212
G G HK+ + R I ++ + LH G + +H +L ++N+LL +
Sbjct: 91 AGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAK 150
Query: 213 VSDFGLHLLLNPTAGQEMLEASASQGYK--APELIKMKDASEETDIYSFGVIMLELIS-G 269
+SDFGL L ++ K APE I + S +D++S+GV M E +S G
Sbjct: 151 ISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYG 210
Query: 270 KEPINENPTPD 280
++P + P+
Sbjct: 211 QKPYKKMKGPE 221
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 32/220 (14%)
Query: 77 IGKSNYGTLYKA-----LLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
+G+ +G ++ A L ++ + ++ L+ + ++F ELL ++H ++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWS-------------IIYRISIGI 178
G R L+V + + G+L + +R +A + + ++ +
Sbjct: 109 FGVCTEGR-PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 179 AGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEA 233
A G+ YL G H +H +L ++N L+ + + DFG+ + T G+ ML
Sbjct: 168 AAGMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
+ PE I + + E+D++SFGV++ E+ + GK+P
Sbjct: 225 R----WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
G+ YLH +IH +LK N+ L+ + + DFGL + G+ + Y
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKXLCGTPNYI 209
Query: 241 APELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITD 300
APE++ K S E DI+S G I+ L+ GK P + + T++R ++ +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKE------TYIRIKKNEYSV-- 261
Query: 301 LYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
H NPV+ I + P+LRP++ ++L
Sbjct: 262 -----------PRHINPVASALIRRMLHA-------DPTLRPSVAELL 291
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFL--RPVCTTRD----KEFGDLIELLGCIRHPN 127
GE +G + + K + +G +F+ R + ++R +E + +L IRHPN
Sbjct: 31 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
++ L + + + +++ G L + E+ + I G+ YLH+
Sbjct: 91 IITLHDIFEN-KTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 188 GFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+ I H +LK +NI LLD+N P + DFG+ + AG E + + APE
Sbjct: 148 ---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE--AGNEFKNIFGTPEFVAPE 202
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEP 272
++ + E D++S GVI L+SG P
Sbjct: 203 IVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE--MLEASA 235
I GL Y+H+ ++H +LK N+L++ + DFGL + +P + E A
Sbjct: 153 ILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA 209
Query: 236 SQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGK 270
++ Y+APE ++ K ++ DI+S G I+ E++S +
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 63 DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IEL 119
DL D + GE +G +G +YKA ++ +L + + T ++E D I++
Sbjct: 32 DLNPEDFWEIIGE-LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 120 LGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII-------- 171
L HPN+V LL FY NL I +G A ++
Sbjct: 88 LASCDHPNIVKLLD-------------AFYYENNLWILIEFCAGGAVDAVMLELERPLTE 134
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
+I + LD L+ IIH +LK+ NIL + ++DFG+ N Q
Sbjct: 135 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRTIQRRD 193
Query: 232 EASASQGYKAPELIKMKDASE-----ETDIYSFGVIMLELISGKEPINE-NP 277
+ + APE++ + + + + D++S G+ ++E+ + P +E NP
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 27/279 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRD---KEFGDLIELLGCIRHPNLVP 130
G +GK +G +Y A ++S + L+ L ++ + IE+ + HPN++
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
L ++ R LI+ + RG L + ++ + + I +A L Y H
Sbjct: 88 LYNYFYDRRRIYLILE-YAPRGELYKELQKSCTFDEQRTAT--IMEELADALMYCHG--- 141
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
+ +IH ++K +N+LL + ++DFG + + M + Y PE+I+ +
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTM---CGTLDYLPPEMIEGRMH 198
Query: 251 SEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRI-TDLYHPDMLLC 309
+E+ D++ GV+ EL+ G NP + H T+ R +D + + L
Sbjct: 199 NEKVDLWCIGVLCYELLVG------NPPFESASHNETYRRIVKVDLKFPASVPTGAQDLI 252
Query: 310 SNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
S NP +L +A S P +R N ++VL
Sbjct: 253 SKLLRHNPSE--------RLPLAQVSAHPWVRANSRRVL 283
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSG---SVRLLRFLR----PVCTTRD-KEFGDLIELLGCIRHP 126
EVIGK + + + + + +G +V+++ + P +T D K + +L +HP
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDY 184
++V LL Y+ G +V F +L I R +G + ++ I L Y
Sbjct: 87 HIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 185 LHTGFHRPIIHGNLKSKNILL--DRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQG--- 238
H IIH ++K +N+LL N P + DFG+ + L G+ L A G
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL----GESGLVAGGRVGTPH 198
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
+ APE++K + + D++ GVI+ L+SG P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 63 DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IEL 119
DL D + GE +G +G +YKA ++ +L + + T ++E D I++
Sbjct: 32 DLNPEDFWEIIGE-LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 120 LGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII-------- 171
L HPN+V LL FY NL I +G A ++
Sbjct: 88 LASCDHPNIVKLLD-------------AFYYENNLWILIEFCAGGAVDAVMLELERPLTE 134
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
+I + LD L+ IIH +LK+ NIL + ++DFG+ N Q
Sbjct: 135 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRXIQRRD 193
Query: 232 EASASQGYKAPELIKMKDASE-----ETDIYSFGVIMLELISGKEPINE-NP 277
+ + APE++ + + + + D++S G+ ++E+ + P +E NP
Sbjct: 194 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 75 EVIGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR---HPN 127
E +G ++G + + A ++ SV + + L+P ++ + D I + + H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAV-KCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
L+ L G P + +V G+L +R G + R ++ +A G+ YL +
Sbjct: 73 LIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLES 129
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA--SASQGYKAPELI 245
+ IH +L ++N+LL + DFGL L +++ + APE +
Sbjct: 130 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEP 272
K + S +D + FGV + E+ + G+EP
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 98/212 (46%), Gaps = 32/212 (15%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRL--LRFL-RPVCTTRD--KEFGDLIELLGCIRHPNLVP 130
IGK ++G + ++Q++ + ++ ++++ + C R+ + ++++ + HP LV
Sbjct: 22 AIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH-------KWSIIYRISIGIAGGLD 183
L +Y+ E + + + + GG H K + + LD
Sbjct: 80 L--WYSFQDEEDMFM--------VVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
YL ++ IIH ++K NILLD + +++DF + +L P Q + + ++ Y APE
Sbjct: 130 YLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQ-ITTMAGTKPYMAPE 184
Query: 244 LIKMKDA---SEETDIYSFGVIMLELISGKEP 272
+ + S D +S GV EL+ G+ P
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 76 VIGKSNYGTLYKALLQRSGS-VRLLRFLRPVCTTRDKEFGDL----IELLGCIRHPNLVP 130
++G+ +YG + K + +G V + +FL + DK + I+LL +RH NLV
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLE---SDDDKMVKKIAMREIKLLKQLRHENLVN 88
Query: 131 LLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFH 190
LL + +V F L +G + ++ + I G+ + H+
Sbjct: 89 LLEV-CKKKKRWYLVFEFVDHTILDDLELFPNG--LDYQVVQKYLFQIINGIGFCHS--- 142
Query: 191 RPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IIH ++K +NIL+ ++ + DFG L G+ + A++ Y+APEL+ + D
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELL-VGDV 200
Query: 251 S--EETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
+ D+++ G ++ E+ G+ + D+ +H+ + N + H+
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPAF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 15/215 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
E +G +G + + + Q +G ++ R + +++E L I+++ + HPN+V
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 134 FYAG-----PRGEKLIVHPFYKRGNLAQCIRGGSGEAH-KWSIIYRISIGIAGGLDYLHT 187
G P L+ + + G+L + + K I + I+ L YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVS---DFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
IIH +LK +NI+L Q + D G L+ G+ E + Y APEL
Sbjct: 141 NR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAPEL 195
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTP 279
++ K + D +SFG + E I+G P N P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 35/232 (15%)
Query: 63 DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL---IEL 119
DL D + GE +G +G +YKA ++ +L + + T ++E D I++
Sbjct: 32 DLNPEDFWEIIGE-LGDGAFGKVYKA---QNKETSVLAAAKVIDTKSEEELEDYMVEIDI 87
Query: 120 LGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII-------- 171
L HPN+V LL FY NL I +G A ++
Sbjct: 88 LASCDHPNIVKLLD-------------AFYYENNLWILIEFCAGGAVDAVMLELERPLTE 134
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
+I + LD L+ IIH +LK+ NIL + ++DFG+ N Q
Sbjct: 135 SQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRXIQRRD 193
Query: 232 EASASQGYKAPELIKMKDASE-----ETDIYSFGVIMLELISGKEPINE-NP 277
+ + APE++ + + + + D++S G+ ++E+ + P +E NP
Sbjct: 194 XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 15/215 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
E +G +G + + + Q +G ++ R + +++E L I+++ + HPN+V
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 134 FYAG-----PRGEKLIVHPFYKRGNLAQCIRGGSGEAH-KWSIIYRISIGIAGGLDYLHT 187
G P L+ + + G+L + + K I + I+ L YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVS---DFGLHLLLNPTAGQEMLEASASQGYKAPEL 244
IIH +LK +NI+L Q + D G L+ G+ E + Y APEL
Sbjct: 140 NR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD--QGELCTEFVGTLQYLAPEL 194
Query: 245 IKMKDASEETDIYSFGVIMLELISGKEPINENPTP 279
++ K + D +SFG + E I+G P N P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 125 HPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLD 183
H N+V + Y G++L +V F + G L + + I + + + L
Sbjct: 101 HDNVVDMYSSYLV--GDELWVVMEFLEGGALTDIVTHTRMNEEQ---IATVCLSVLRALS 155
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
YLH ++ +IH ++KS +ILL + + +SDFG ++ + + + APE
Sbjct: 156 YLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK-XLVGTPYWMAPE 211
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEP-INENP 277
+I E DI+S G++++E+I G+ P NE P
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 246
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 54/233 (23%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL------LGCIRHPNL 128
E +GK + + + + + +G L F + T+ D +L ++HPN+
Sbjct: 12 EELGKGAFSVVRRCVHKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 129 VPL-----------LGF---YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRI 174
V L L F G E ++ FY + + CI+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------------- 113
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEML 231
I + Y H+ I+H NLK +N+LL + ++DFGL + +N +
Sbjct: 114 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ + GY +PE++K S+ DI++ GVI+ L+ G P DED H
Sbjct: 168 --AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW-----DEDQH 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 54/233 (23%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL------LGCIRHPNL 128
E +GK + + + + + +G L F + T+ D +L ++HPN+
Sbjct: 11 EELGKGAFSVVRRCVHKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 129 VPL-----------LGF---YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRI 174
V L L F G E ++ FY + + CI+
Sbjct: 67 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------------- 112
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEML 231
I + Y H+ I+H NLK +N+LL + ++DFGL + +N +
Sbjct: 113 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 166
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ + GY +PE++K S+ DI++ GVI+ L+ G P DED H
Sbjct: 167 --AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW-----DEDQH 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 12/208 (5%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLR--PVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
IG +YG K + G + + + L + + + LL ++HPN+V
Sbjct: 13 TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYD 72
Query: 134 FYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKW--SIIYRISIGIAGGLDYLHT--- 187
L IV + + G+LA I G+ E + R+ + L H
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN-PTAGQEMLEASASQGYKAPELIK 246
G H ++H +LK N+ LD + DFGL +LN T+ + + Y +PE +
Sbjct: 133 GGH-TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPY--YMSPEQMN 189
Query: 247 MKDASEETDIYSFGVIMLELISGKEPIN 274
+E++DI+S G ++ EL + P
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFT 217
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 54/233 (23%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL------LGCIRHPNL 128
E +GK + + + + + +G L F + T+ D +L ++HPN+
Sbjct: 12 EELGKGAFSVVRRCVHKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 129 VPL-----------LGF---YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRI 174
V L L F G E ++ FY + + CI+
Sbjct: 68 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------------- 113
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEML 231
I + Y H+ I+H NLK +N+LL + ++DFGL + +N +
Sbjct: 114 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ + GY +PE++K S+ DI++ GVI+ L+ G P DED H
Sbjct: 168 --AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW-----DEDQH 213
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+++ DL+ E++ I +H N++ LLG G ++ + +GNL + +R
Sbjct: 81 EEDLSDLVSEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 166 HKWSI-IYRI-------------SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S I R+ + +A G++YL + + IH +L ++N+L+ N
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVM 196
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL +N ++ + APE + + + ++D++SFGV+M E+ + G
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG 256
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 257 GSPYPGIPV-EELFKL---LKEG---HRMDKPAN-----CTN-------------ELYMM 291
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 292 MRDCWHAVPSQRPTFKQL---VEDLDR 315
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILIGELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 75 EVIGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR---HPN 127
E +G ++G + + A ++ SV ++ L+P ++ + D I + + H N
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
L+ L G P + +V G+L +R G + R ++ +A G+ YL +
Sbjct: 77 LIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLES 133
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA--SASQGYKAPELI 245
+ IH +L ++N+LL + DFGL L +++ + APE +
Sbjct: 134 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEP 272
K + S +D + FGV + E+ + G+EP
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 75 EVIGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR---HPN 127
E +G ++G + + A ++ SV ++ L+P ++ + D I + + H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
L+ L G P + +V G+L +R G + R ++ +A G+ YL +
Sbjct: 73 LIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLES 129
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA--SASQGYKAPELI 245
+ IH +L ++N+LL + DFGL L +++ + APE +
Sbjct: 130 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEP 272
K + S +D + FGV + E+ + G+EP
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 54/233 (23%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIEL------LGCIRHPNL 128
E +GK + + + + + +G L F + T+ D +L ++HPN+
Sbjct: 35 EELGKGAFSVVRRCVHKTTG----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 129 VPL-----------LGF---YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRI 174
V L L F G E ++ FY + + CI+
Sbjct: 91 VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------------- 136
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEML 231
I + Y H+ I+H NLK +N+LL + ++DFGL + +N +
Sbjct: 137 ---ILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 232 EASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ + GY +PE++K S+ DI++ GVI+ L+ G P DED H
Sbjct: 191 --AGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF-----WDEDQH 236
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 75 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 127
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 182
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 134 FYAGPRGEKLIVHPF----YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +K +V+ Y + + R S +IY + L Y+H+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 195
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 75 EVIGKSNYGTL----YKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR---HPN 127
E +G ++G + + A ++ SV ++ L+P ++ + D I + + H N
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
L+ L G P + +V G+L +R G + R ++ +A G+ YL +
Sbjct: 73 LIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAVQVAEGMGYLES 129
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA--SASQGYKAPELI 245
+ IH +L ++N+LL + DFGL L +++ + APE +
Sbjct: 130 ---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 246 KMKDASEETDIYSFGVIMLELIS-GKEP 272
K + S +D + FGV + E+ + G+EP
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 21/221 (9%)
Query: 68 DILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFL-RPVCTTRDKEFGDLIELLGCIRHP 126
D+ E++G+ Y + A+ ++G ++ + + +R + F ++ L C +
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
N++ L+ F+ L+ LA + + S + R +A LD+LH
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVR---DVAAALDFLH 128
Query: 187 TGFHRPIIHGNLKSKNILLD--RNYQPY-VSDF--GLHLLLN----PTAGQEMLEASASQ 237
T + I H +LK +NIL + P + DF G + LN P E+ S
Sbjct: 129 T---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 238 GYKAPELIKM-KDAS----EETDIYSFGVIMLELISGKEPI 273
Y APE++++ D + + D++S GV++ ++SG P
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 15 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 74
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 75 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 127
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 182
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
Query: 169 SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQ 228
++ Y I I GL +L + + II+ +LK N++LD ++DFG+ N G
Sbjct: 444 AVFYAAEIAI--GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGM-CKENIWDGV 497
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
+ Y APE+I + + D ++FGV++ E+++G+ P DED +
Sbjct: 498 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE---DEDELFQSI 554
Query: 289 MRNAV 293
M + V
Sbjct: 555 MEHNV 559
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 24/231 (10%)
Query: 52 TEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTL----YKALLQRSGSVRLLRFLRPVCT 107
++ L G +DL + E +G ++G + + A ++ SV ++ L+P
Sbjct: 2 SQSLTCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVL 53
Query: 108 TRDKEFGDLIELLGCIR---HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE 164
++ + D I + + H NL+ L G P + +V G+L +R G
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRLRKHQGH 111
Query: 165 AHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNP 224
+ R ++ +A G+ YL + + IH +L ++N+LL + DFGL L
Sbjct: 112 -FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
Query: 225 TAGQEMLEA--SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
+++ + APE +K + S +D + FGV + E+ + G+EP
Sbjct: 168 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 18/209 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
++ L Y + + +++ G L + E+ I G+ YLH+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 188 GFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGYKAPE 243
I H +LK +NI LLDRN +P + DFGL ++ G E + + APE
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEFVAPE 187
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEP 272
++ + E D++S GVI L+SG P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
++ L Y + + +++ G L + + + + I G+ YLH+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI--LNGVYYLHS 132
Query: 188 GFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGYKAPE 243
I H +LK +NI LLDRN +P + DFGL ++ G E + + APE
Sbjct: 133 ---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEFVAPE 187
Query: 244 LIKMKDASEETDIYSFGVIMLELISGKEP 272
++ + E D++S GVI L+SG P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLD 183
+HPN++ L Y + L+ L + +R + S + I ++
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT---IGKTVE 135
Query: 184 YLHTGFHRPIIHGNLKSKNIL-LDRNYQP---YVSDFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ + ++H +LK NIL +D + P + DFG L G ++ + +
Sbjct: 136 YLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL-LMTPCYTANF 191
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEPINENP--TPDE 281
APE++K + E DI+S G+++ +++G P P TP+E
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 235
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 117 IELLGCIRHPNLVPLLGFYAG---PRGEKLIVHPFYKRGNLAQCI---RGGSGEAHKWSI 170
I LL HPN++ L + P KL + R +LAQ I R H
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYF 139
Query: 171 IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEM 230
+Y I +G LH ++H +L NILL N + DF L TA
Sbjct: 140 MYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFN--LAREDTADANK 190
Query: 231 LEASASQGYKAPELI-KMKDASEETDIYSFGVIMLELISGK 270
+ Y+APEL+ + K ++ D++S G +M E+ + K
Sbjct: 191 THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I GL+++H F +++ +LK NILLD + +SD GL + + +
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 238 GYKAPELIKMKDASEET-DIYSFGVIMLELISGKEPINENPTPDE 281
GY APE+++ A + + D +S G ++ +L+ G P ++ T D+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I GL+++H F +++ +LK NILLD + +SD GL + + +
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 238 GYKAPELIKMKDASEET-DIYSFGVIMLELISGKEPINENPTPDE 281
GY APE+++ A + + D +S G ++ +L+ G P ++ T D+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 117 IELLGCIRHPNLVPLLGFYAG---PRGEKLIVHPFYKRGNLAQCI---RGGSGEAHKWSI 170
I LL HPN++ L + P KL + R +LAQ I R H
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYF 139
Query: 171 IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEM 230
+Y I +G LH ++H +L NILL N + DF L TA
Sbjct: 140 MYHILLG-------LHVLHEAGVVHRDLHPGNILLADNNDITICDFN--LAREDTADANK 190
Query: 231 LEASASQGYKAPELI-KMKDASEETDIYSFGVIMLELISGK 270
+ Y+APEL+ + K ++ D++S G +M E+ + K
Sbjct: 191 THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E IG+ YGT++KA + + + L+ +R P R+ I LL ++H
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE------ICLLKELKHK 61
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
N+V L + L+ + +L + +G+ I+ + GL + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFE--FCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCH 118
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LI 245
+ R ++H +LK +N+L++RN + ++DFGL E + Y+ P+ L
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-VTLWYRPPDVLF 174
Query: 246 KMKDASEETDIYSFGVIMLELISGKEPI 273
K S D++S G I EL + P+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I GL+++H F +++ +LK NILLD + +SD GL + + +
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 353
Query: 238 GYKAPELIKMKDASEET-DIYSFGVIMLELISGKEPINENPTPDE 281
GY APE+++ A + + D +S G ++ +L+ G P ++ T D+
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 14/131 (10%)
Query: 169 SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQ 228
++ Y I I GL +L + + II+ +LK N++LD ++DFG+ N G
Sbjct: 123 AVFYAAEIAI--GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGM-CKENIWDGV 176
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
+ Y APE+I + + D ++FGV++ E+++G+ P E DE F
Sbjct: 177 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDELFQ---- 231
Query: 289 MRNAVLDHRIT 299
++++H +
Sbjct: 232 ---SIMEHNVA 239
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I GL+++H F +++ +LK NILLD + +SD GL + + +
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 238 GYKAPELIKMKDASEET-DIYSFGVIMLELISGKEPINENPTPDE 281
GY APE+++ A + + D +S G ++ +L+ G P ++ T D+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 112 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 195
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLD 183
+HPN++ L Y + L+ L + +R + S + I ++
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT---IGKTVE 135
Query: 184 YLHTGFHRPIIHGNLKSKNIL-LDRNYQP---YVSDFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ + ++H +LK NIL +D + P + DFG L G ++ + +
Sbjct: 136 YLHS---QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGL-LMTPCYTANF 191
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEPINENP--TPDE 281
APE++K + E DI+S G+++ +++G P P TP+E
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 235
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 160 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 214
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 142 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 196
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 197 GATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 195
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 145 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 199
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 149 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 203
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 204 GATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 113 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 173 RISIG-IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML 231
+I +G I L++LH II+ ++K +NILLD N ++DFGL +
Sbjct: 162 QIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 218
Query: 232 EASASQGYKAPELIKMKDASEE--TDIYSFGVIMLELISGKEPIN 274
+ + Y AP++++ D+ + D +S GV+M EL++G P
Sbjct: 219 DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 153 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 207
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 12/197 (6%)
Query: 77 IGKSNYGTLYKALLQRSGS-VRLLRFLRPVCTTRDKEFG-DLIELLGCIRHPNLVPLLGF 134
IG+ +YG ++K + +G V + +FL K+ I +L ++HPNLV LL
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
+ R L+ + L + R G ++ I+ +++ H I
Sbjct: 71 FRRKRRLHLVFE-YCDHTVLHELDRYQRGVPE--HLVKSITWQTLQAVNFCHK---HNCI 124
Query: 195 HGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAGQEMLEASASQGYKAPE-LIKMKDASE 252
H ++K +NIL+ ++ + DFG LL P+ + + A++ Y++PE L+
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--DEVATRWYRSPELLVGDTQYGP 182
Query: 253 ETDIYSFGVIMLELISG 269
D+++ G + EL+SG
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 153 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 207
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 208 GATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML-EASAS 236
+ G+ YLH G I H ++K +N+LLD +SDFGL + + +L + +
Sbjct: 114 LMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 237 QGYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINE 275
Y APEL+K ++ +E D++S G+++ +++G+ P ++
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIF 229
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 154 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 208
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 26/213 (12%)
Query: 74 GEVIGKSNYGTLYKALLQRSG---SVRLLRFLRPVCTTRDKEFGDL---IELLGCIRHPN 127
GE +G + + K + +G + + ++ R + R D+ + +L I+HPN
Sbjct: 16 GEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN 75
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI----GIAGGLD 183
++ L Y + + +++ G L + A K S+ + I G+
Sbjct: 76 VITLHEVYEN-KTDVILILELVAGGELFDFL------AEKESLTEEEATEFLKQILNGVY 128
Query: 184 YLHTGFHRPIIHGNLKSKNI-LLDRNY-QPYVS--DFGLHLLLNPTAGQEMLEASASQGY 239
YLH+ I H +LK +NI LLDRN +P + DFGL ++ G E + +
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID--FGNEFKNIFGTPEF 183
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
APE++ + E D++S GVI L+SG P
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 195
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQE 229
I+ ++++ I L YL +IH ++K NILLD Q + DFG+ L ++
Sbjct: 125 ILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD 182
Query: 230 MLEASASQGYKAPELIKMKDASE-----ETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
++ Y APE I D ++ D++S G+ ++EL +G+ P T DF
Sbjct: 183 --RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT---DFE 237
Query: 285 LPT 287
+ T
Sbjct: 238 VLT 240
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I G+ YLH+ I+H +L N+LL RN ++DFGL L ++ +
Sbjct: 121 IITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-MPHEKHYTLCGTP 176
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPD-------EDFHLPTFM 289
Y +PE+ E+D++S G + L+ G+ P + + + D+ +P+F+
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFL 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 169 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 223
Query: 246 KMKDASEETDIYSFGVIMLELISGKEPI 273
D + D++S G ++ EL+ G +PI
Sbjct: 224 GATDYTSSIDVWSAGCVLAELLLG-QPI 250
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
E++G +G ++K +G + ++ +E + I ++ + H NL+ L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 135 YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
+ + + ++V + G L I S + I + I G+ ++H + I+
Sbjct: 155 FES-KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK-QICEGIRHMHQMY---IL 209
Query: 195 HGNLKSKNIL-LDRNY-QPYVSDFGLHLLLNPTAGQEMLEAS-ASQGYKAPELIKMKDAS 251
H +LK +NIL ++R+ Q + DFGL P +E L+ + + + APE++ S
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKP---REKLKVNFGTPEFLAPEVVNYDFVS 266
Query: 252 EETDIYSFGVIMLELISGKEP 272
TD++S GVI L+SG P
Sbjct: 267 FPTDMWSVGVIAYMLLSGLSP 287
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK------EFGDLIELLGCIRHPN 127
GE +G + + K + +G +F++ + + E + +L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYL 185
++ L Y R + +++ G L + + E S I +I G++YL
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYL 131
Query: 186 HTGFHRPIIHGNLKSKNI-LLDRNYQ-PYVS--DFGLHLLLNPTAGQEMLEASASQGYKA 241
HT + I H +LK +NI LLD+N P++ DFGL + G E + + A
Sbjct: 132 HT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPEFVA 186
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEP 272
PE++ + E D++S GVI L+SG P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 175 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 229
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 24/208 (11%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR-------PVCTTRDKEFGDLIELLGCIRHPN 127
E +G Y T+YK L + +G L+ ++ P R+ I L+ ++H N
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE------ISLMKELKHEN 64
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIR----GGSGEAHKWSIIYRISIGIAGGLD 183
+V L L+ + +L + + G + + +++ + GL
Sbjct: 65 IVRLYDVIHTENKLTLVFE--FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE 243
+ H I+H +LK +N+L+++ Q + DFGL E + Y+AP+
Sbjct: 123 FCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEV-VTLWYRAPD 178
Query: 244 -LIKMKDASEETDIYSFGVIMLELISGK 270
L+ + S DI+S G I+ E+I+GK
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK------EFGDLIELLGCIRHPN 127
GE +G + + K + +G +F++ + + E + +L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYL 185
++ L Y R + +++ G L + + E S I +I G++YL
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYL 131
Query: 186 HTGFHRPIIHGNLKSKNI-LLDRNYQ-PYVS--DFGLHLLLNPTAGQEMLEASASQGYKA 241
HT + I H +LK +NI LLD+N P++ DFGL + G E + + A
Sbjct: 132 HT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPEFVA 186
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEP 272
PE++ + E D++S GVI L+SG P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK------EFGDLIELLGCIRHPN 127
GE +G + + K + +G +F++ + + E + +L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYL 185
++ L Y R + +++ G L + + E S I +I G++YL
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYL 131
Query: 186 HTGFHRPIIHGNLKSKNI-LLDRNYQ-PYVS--DFGLHLLLNPTAGQEMLEASASQGYKA 241
HT + I H +LK +NI LLD+N P++ DFGL + G E + + A
Sbjct: 132 HT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPEFVA 186
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEP 272
PE++ + E D++S GVI L+SG P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 177 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 231
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 232 GATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK------EFGDLIELLGCIRHPN 127
GE +G + + K + +G +F++ + + E + +L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYL 185
++ L Y R + +++ G L + + E S I +I G++YL
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYL 131
Query: 186 HTGFHRPIIHGNLKSKNI-LLDRNYQ-PYVS--DFGLHLLLNPTAGQEMLEASASQGYKA 241
HT + I H +LK +NI LLD+N P++ DFGL + G E + + A
Sbjct: 132 HT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPEFVA 186
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEP 272
PE++ + E D++S GVI L+SG P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 146 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 200
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 201 GATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDK------EFGDLIELLGCIRHPN 127
GE +G + + K + +G +F++ + + E + +L + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDYL 185
++ L Y R + +++ G L + + E S I +I G++YL
Sbjct: 77 VITLHDVYEN-RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI----LDGVNYL 131
Query: 186 HTGFHRPIIHGNLKSKNI-LLDRNYQ-PYVS--DFGLHLLLNPTAGQEMLEASASQGYKA 241
HT + I H +LK +NI LLD+N P++ DFGL + G E + + A
Sbjct: 132 HT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED--GVEFKNIFGTPEFVA 186
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEP 272
PE++ + E D++S GVI L+SG P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 9/105 (8%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML----EA 233
I G+ YLH+ + IH NL ++N+LLD + + DFGL + G E +
Sbjct: 126 ICEGMAYLHSQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDG 180
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPT 278
+ + APE +K +D++SFGV + EL++ + PT
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 179 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 233
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 234 GATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+VIG ++G +Y+A L SG + ++ + +++E ++++ + H N+V L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYF 81
Query: 135 Y--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHTG 188
+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 189 FHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-K 246
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSXICSRYYRAPELIFG 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 59/109 (54%), Gaps = 17/109 (15%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPY---VSDFGLH--LLLN----PTAGQ 228
+A LD+LH ++ I H +LK +NIL + Q + DFGL + LN P +
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 229 EMLEASASQGYKAPELIKM--KDAS---EETDIYSFGVIMLELISGKEP 272
E+L S Y APE+++ ++AS + D++S GVI+ L+SG P
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 100/205 (48%), Gaps = 19/205 (9%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-IELLGCIRHPNLVPLLG 133
+VIG ++G +Y+A L SG + ++ + +DK F + ++++ + H N+V L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 134 FY--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHT 187
F+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI- 245
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 220 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIF 274
Query: 246 KMKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 275 GATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 10/197 (5%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYA 136
IG+ + G + A + SG ++ + R + + + ++ +H N+V + Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 137 GPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIH 195
GE+L ++ F + G L + + I + + L YLH + +IH
Sbjct: 113 V--GEELWVLMEFLQGGALTDIVSQVRLNEEQ---IATVCEAVLQALAYLHA---QGVIH 164
Query: 196 GNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETD 255
++KS +ILL + + +SDFG ++ + + + APE+I + E D
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK-XLVGTPYWMAPEVISRSLYATEVD 223
Query: 256 IYSFGVIMLELISGKEP 272
I+S G++++E++ G+ P
Sbjct: 224 IWSLGIMVIEMVDGEPP 240
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML----EA 233
I G+ YLH + IH NL ++N+LLD + + DFGL + G E +
Sbjct: 126 ICEGMAYLHAQHY---IHRNLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDG 180
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPT 278
+ + APE +K +D++SFGV + EL++ + PT
Sbjct: 181 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 92/199 (46%), Gaps = 13/199 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDL-----IELLGCIRHPNLV 129
+ +G+ + T+YKA + + + ++ ++ + K+ + I+LL + HPN++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
LL + L+ + +L I+ S S I + GL+YLH +
Sbjct: 76 GLLDAFGHKSNISLVFD--FMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEYLHQHW 132
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-KMK 248
I+H +LK N+LLD N ++DFGL + + ++ Y+APEL+ +
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 249 DASEETDIYSFGVIMLELI 267
D+++ G I+ EL+
Sbjct: 189 MYGVGVDMWAVGCILAELL 207
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 76 VIGKSNYGTLY---KALLQRSGSVRLLRFLRPVCTTRDKEFGDLIE----LLGCIRHPNL 128
V+GK YG ++ K +G + ++ L+ R+ + + +L ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 129 VPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
V L+ YA G KL ++ + G L + + Y I +A L +LH
Sbjct: 84 VDLI--YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA--LGHLH- 138
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
+ II+ +LK +NI+L+ ++DFGL + G + Y APE++
Sbjct: 139 --QKGIIYRDLKPENIMLNHQGHVKLTDFGL-CKESIHDGTVTHXFCGTIEYMAPEILMR 195
Query: 248 KDASEETDIYSFGVIMLELISGKEPI---NENPTPDE----DFHLPTFMRNAVLD 295
+ D +S G +M ++++G P N T D+ +LP ++ D
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 76 VIGKSNYGTLY---KALLQRSGSVRLLRFLRPVCTTRDKEFGDLIE----LLGCIRHPNL 128
V+GK YG ++ K +G + ++ L+ R+ + + +L ++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 129 VPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
V L+ YA G KL ++ + G L + + Y I +A L +LH
Sbjct: 84 VDLI--YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA--LGHLH- 138
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM 247
+ II+ +LK +NI+L+ ++DFGL + G + Y APE++
Sbjct: 139 --QKGIIYRDLKPENIMLNHQGHVKLTDFGL-CKESIHDGTVTHTFCGTIEYMAPEILMR 195
Query: 248 KDASEETDIYSFGVIMLELISGKEPI---NENPTPDE----DFHLPTFMRNAVLD 295
+ D +S G +M ++++G P N T D+ +LP ++ D
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD 250
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR-DKEFGDLIELLGCIRHPNLVPLLGF 134
V+GK YG +Y A S VR+ P +R + + I L ++H N+V LG
Sbjct: 29 VLGKGTYGIVY-AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 135 YAGPRGEKLIVHPFYKR---GNLAQCIRGGSGE-AHKWSIIYRISIGIAGGLDYLHTGFH 190
++ E + F ++ G+L+ +R G I + I GL YLH
Sbjct: 88 FS----ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---D 140
Query: 191 RPIIHGNLKSKNILLDRNYQPY--VSDFGLHLLL---NPTAGQEMLEASASQGYKAPELI 245
I+H ++K N+L++ Y +SDFG L NP + + Y APE+I
Sbjct: 141 NQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTET----FTGTLQYMAPEII 195
Query: 246 KM--KDASEETDIYSFGVIMLELISGKEPINENPTP 279
+ + DI+S G ++E+ +GK P E P
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP 231
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
Query: 70 LDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLV 129
LD + +G+ ++ K + ++S ++ + ++ ++ L C HPN+V
Sbjct: 12 LDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK--EITALKLCEGHPNIV 69
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH-KWSIIYRISIGIAGGLDYLHTG 188
L + + +V G L + I+ + + S I R + + ++H
Sbjct: 70 KLHEVFHD-QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR---KLVSAVSHMHD- 124
Query: 189 FHRPIIHGNLKSKNILL---DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
++H +LK +N+L + N + + DFG L P Q + + Y APEL+
Sbjct: 125 --VGVVHRDLKPENLLFTDENDNLEIKIIDFGF-ARLKPPDNQPLKTPCFTLHYAAPELL 181
Query: 246 KMKDASEETDIYSFGVIMLELISGKEPI 273
E D++S GVI+ ++SG+ P
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 11/202 (5%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLI---ELLGCIR-HPNLVPL 131
V+GK ++G + A ++ +G + ++ L+ +D + + +L R HP L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
+ P V F G+L I+ + Y + I L +LH +
Sbjct: 90 FCCFQTP-DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFY--AAEIISALMFLHD---K 143
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDAS 251
II+ +LK N+LLD ++DFG+ G + Y APE+++
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGM-CKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 252 EETDIYSFGVIMLELISGKEPI 273
D ++ GV++ E++ G P
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPF 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 10/84 (11%)
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA-------GQE--MLEASASQGYKAPE 243
+IH +LK N+L++ N V DFGL +++ +A GQ+ M+E A++ Y+APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 244 -LIKMKDASEETDIYSFGVIMLEL 266
++ S D++S G I+ EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLE 232
S +A G+++L + R IH +L ++NILL + DFGL + +P ++ +
Sbjct: 199 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-D 254
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLP 286
A + APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 255 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLK 310
Query: 287 TFMRNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 311 EGTRMRAPDYTTPEMYQ-TMLDC 332
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE 164
H N+V LLG P G +++ F K GNL+ +R E
Sbjct: 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 124
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 120 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLE 232
S +A G+++L + R IH +L ++NILL + DFGL + +P ++ +
Sbjct: 197 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-D 252
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLP 286
A + APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 253 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLK 308
Query: 287 TFMRNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 309 EGTRMRAPDYTTPEMYQT-MLDC 330
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE 164
H N+V LLG P G +++ F K GNL+ +R E
Sbjct: 83 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 122
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 163 GEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLL 222
G+ I+ +I++ I L++LH+ +IH ++K N+L++ Q DFG+ L
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL 187
Query: 223 NPTAGQEMLEASASQGYKAPELI----KMKDASEETDIYSFGVIMLELISGKEPINENPT 278
+++ + + Y APE I K S ++DI+S G+ +EL + P + T
Sbjct: 188 VDDVAKDI--DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGT 245
Query: 279 P 279
P
Sbjct: 246 P 246
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLE 232
S +A G+++L + R IH +L ++NILL + DFGL + +P ++ +
Sbjct: 204 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-D 259
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLP 286
A + APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 260 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLK 315
Query: 287 TFMRNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 316 EGTRMRAPDYTTPEMYQT-MLDC 337
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Query: 72 APGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPL 131
A G+VI +G + K R+ +V++L+ R +L L+ H N+V L
Sbjct: 39 AFGQVIEADAFG-IDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIHIGHHLNVVNL 96
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE 164
LG P G +++ F K GNL+ +R E
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 25/216 (11%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTR-DKEFGDLIELLGCIRHPNLVPLLGF 134
V+GK YG +Y A S VR+ P +R + + I L ++H N+V LG
Sbjct: 15 VLGKGTYGIVY-AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 135 YAGPRGEKLIVHPFYKR---GNLAQCIRGGSGE-AHKWSIIYRISIGIAGGLDYLHTGFH 190
++ E + F ++ G+L+ +R G I + I GL YLH
Sbjct: 74 FS----ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD--- 126
Query: 191 RPIIHGNLKSKNILLDRNYQPY--VSDFGLHLLL---NPTAGQEMLEASASQGYKAPELI 245
I+H ++K N+L++ Y +SDFG L NP + + Y APE+I
Sbjct: 127 NQIVHRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTET----FTGTLQYMAPEII 181
Query: 246 KM--KDASEETDIYSFGVIMLELISGKEPINENPTP 279
+ + DI+S G ++E+ +GK P E P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEP 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 17/143 (11%)
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL--HLLLNPTAGQEMLE 232
S +A G+++L + R IH +L ++NILL + DFGL + +P ++ +
Sbjct: 206 SFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG-D 261
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTP----DEDF--HLP 286
A + APE I + + ++D++SFGV++ E+ S + +P P DE+F L
Sbjct: 262 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS----LGASPYPGVKIDEEFCRRLK 317
Query: 287 TFMRNAVLDHRITDLYHPDMLLC 309
R D+ ++Y ML C
Sbjct: 318 EGTRMRAPDYTTPEMYQT-MLDC 339
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE 164
H N+V LLG P G +++ F K GNL+ +R E
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLR--------PVCTTRDKEFGDLIELLGCIRHP 126
E IG+ YGT++KA + + + L+ +R P R+ I LL ++H
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE------ICLLKELKHK 61
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH 186
N+V L + L+ + +L + +G+ I+ + GL + H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFE--FCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGFCH 118
Query: 187 TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LI 245
+ R ++H +LK +N+L++RN + +++FGL E + Y+ P+ L
Sbjct: 119 S---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV-VTLWYRPPDVLF 174
Query: 246 KMKDASEETDIYSFGVIMLELISGKEPI 273
K S D++S G I EL + P+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 116 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA-------GQE--MLEASASQGYKAPE 243
+IH +LK N+L++ N V DFGL +++ +A GQ+ M E A++ Y+APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 244 -LIKMKDASEETDIYSFGVIMLEL 266
++ S D++S G I+ EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 120 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 114 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 136 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 136 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 134 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 126 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 40/227 (17%)
Query: 75 EVIGKSNYGTLYKALL------QRSGSVRLLRFLRPVCTTRDKEFGDLIE-------LLG 121
E +G+ +G +YK L +++ +V + T +DK G L E L
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAV-------AIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI----------- 170
++HPN+V LLG + +I + G+L + + S + S
Sbjct: 85 RLQHPNVVCLLGVVTKDQPLSMIF-SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 171 ---IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAG 227
+ IA G++YL + ++H +L ++N+L+ +SD GL +
Sbjct: 144 PPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 200
Query: 228 QEMLEASA-SQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
++L S + APE I S ++DI+S+GV++ E+ S G +P
Sbjct: 201 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 478 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+VIG ++G +Y+A L SG + ++ + +++E ++++ + H N+V L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYF 81
Query: 135 Y--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHTG 188
+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 189 FHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-K 246
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIFG 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
++ G+ YL +H +L ++N+LL + +SDFGL L +
Sbjct: 479 VSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 238 GYK--APELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
K APE I S ++D++SFGV+M E S G++P
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 193 IIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA-------GQE--MLEASASQGYKAPE 243
+IH +LK N+L++ N V DFGL +++ +A GQ+ M E A++ Y+APE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 244 -LIKMKDASEETDIYSFGVIMLEL 266
++ S D++S G I+ EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
++G+ +G +Y+ + ++ ++ + CT +KE F ++ + HP++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
+G I+ Y G L + +++ S+ I + YL +
Sbjct: 75 IGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-SLQICKAMAYLES---I 128
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ---GYKAPELIKMK 248
+H ++ +NIL+ + DFGL + ++ +AS ++ + +PE I +
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMSPESINFR 185
Query: 249 DASEETDIYSFGVIMLELIS-GKEP 272
+ +D++ F V M E++S GK+P
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQP 210
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGF 134
+VIG ++G +Y+A L SG + ++ + +++E ++++ + H N+V L F
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE----LQIMRKLDHCNIVRLRYF 81
Query: 135 Y--AGPRGEKLIVHPF--YKRGNLAQCIRGGSGEAHKWSIIYR--ISIGIAGGLDYLHTG 188
+ +G + +++ ++ Y + + R S +IY + L Y+H+
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 189 FHRPIIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQGYKAPELI-K 246
I H ++K +N+LLD + + DFG L G+ + S+ Y+APELI
Sbjct: 142 ---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL--VRGEPNVSYICSRYYRAPELIFG 196
Query: 247 MKDASEETDIYSFGVIMLELISGK 270
D + D++S G ++ EL+ G+
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 40 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-IFIITEYMANGCLLNYLREMRHRFQ 98
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 99 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + + PE++ S ++DI++FGV+M E+ S GK P + H+
Sbjct: 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214
Query: 286 PTFMR 290
+R
Sbjct: 215 AQGLR 219
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 75 EVIGKSNYGTLYKALLQRSG-SVRL---LRFLRPVCTTR-DKEFGDLIELLGCIRHPNLV 129
+V+G +GT+YK + G +V++ ++ LR + + +KE D ++ + P +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
LLG + +V G L +R G ++ + IA G+ YL
Sbjct: 83 RLLGICLTSTVQ--LVTQLMPYGCLLDHVRENRGRLGSQDLL-NWCMQIAKGMSYLE--- 136
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLE-ASASQGYKAPELIKMK 248
++H +L ++N+L+ ++DFGL LL+ + + + A E I +
Sbjct: 137 DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 249 DASEETDIYSFGVIMLELIS-GKEPINENPT 278
+ ++D++S+GV + EL++ G +P + P
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPA 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
++G+ +G +Y+ + ++ ++ + CT +KE F ++ + HP++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
+G I+ Y G L + +++ S+ I + YL +
Sbjct: 91 IGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVL-YSLQICKAMAYLES---I 144
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ---GYKAPELIKMK 248
+H ++ +NIL+ + DFGL + ++ +AS ++ + +PE I +
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMSPESINFR 201
Query: 249 DASEETDIYSFGVIMLELIS-GKEP 272
+ +D++ F V M E++S GK+P
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQP 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 76 VIGKSNYGTLYKALLQRSGSVRL---LRFLRPVCTTRDKE-FGDLIELLGCIRHPNLVPL 131
++G+ +G +Y+ + ++ ++ + CT +KE F ++ + HP++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 132 LGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHR 191
+G I+ Y G L + +++ S+ I + YL +
Sbjct: 79 IGIIE--EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-SLQICKAMAYLES---I 132
Query: 192 PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ---GYKAPELIKMK 248
+H ++ +NIL+ + DFGL + ++ +AS ++ + +PE I +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIE---DEDYYKASVTRLPIKWMSPESINFR 189
Query: 249 DASEETDIYSFGVIMLELIS-GKEP 272
+ +D++ F V M E++S GK+P
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQP 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK +G +++ + +V++ R+ E + L RH N+ LG
Sbjct: 10 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LG 62
Query: 134 FYA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH- 186
F A G + +V +++ G+L + + + ++++ A GL +LH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG---MIKLALSTASGLAHLHM 119
Query: 187 ----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL---HLLLNPTAGQEMLEASASQGY 239
T I H +LKSKNIL+ +N ++D GL H T ++ Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 240 KAPEL----IKMK--DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
APE+ I MK ++ + DIY+ G++ E I+ + I ED+ LP +
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG---GIHEDYQLPYY 230
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIE-------LLGCIRHPN 127
E +G+ +G +YK L + + + T +DK G L E L ++HPN
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAV-AIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 128 LVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI--------------IYR 173
+V LLG + +I + G+L + + S + S
Sbjct: 74 VVCLLGVVTKDQPLSMIF-SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
+ IA G++YL + ++H +L ++N+L+ +SD GL + ++L
Sbjct: 133 LVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189
Query: 234 SA-SQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
S + APE I S ++DI+S+GV++ E+ S G +P
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK +G +++ + +V++ R+ E + L RH N+ LG
Sbjct: 9 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LG 61
Query: 134 FYA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH- 186
F A G + +V +++ G+L + + + ++++ A GL +LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG---MIKLALSTASGLAHLHM 118
Query: 187 ----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL---HLLLNPTAGQEMLEASASQGY 239
T I H +LKSKNIL+ +N ++D GL H T ++ Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 240 KAPEL----IKMK--DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
APE+ I MK ++ + DIY+ G++ E I+ + I ED+ LP +
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG---GIHEDYQLPYY 229
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 45 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQ 103
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 104 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + + PE++ S ++DI++FGV+M E+ S GK P + H+
Sbjct: 160 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 219
Query: 286 PTFMR 290
+R
Sbjct: 220 AQGLR 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 6/185 (3%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 44 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQ 102
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 103 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + + PE++ S ++DI++FGV+M E+ S GK P + H+
Sbjct: 159 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 218
Query: 286 PTFMR 290
+R
Sbjct: 219 AQGLR 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGG 181
+HPN++ L Y + +V K G L I + E ++++ I+ +
Sbjct: 74 QHPNIITLKDVYDDGK-YVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV--- 129
Query: 182 LDYLHTGFHRPIIHGNLKSKNIL-LDRNYQP---YVSDFGLHLLLNPTAGQEMLEASASQ 237
+YLH + ++H +LK NIL +D + P + DFG L G ++ +
Sbjct: 130 -EYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LMTPCYTA 184
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENP--TPDE 281
+ APE+++ + DI+S GV++ +++G P P TP+E
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 51 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQ 109
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 110 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + + PE++ S ++DI++FGV+M E+ S GK P + H+
Sbjct: 166 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 225
Query: 286 PTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
+R LY P + SE K + + +C RP K
Sbjct: 226 AQGLR----------LYRPHL-----------ASE----KVYTIMYSCWHEKADERPTFK 260
Query: 346 QVLWKLEDL 354
+L + D+
Sbjct: 261 ILLSNILDV 269
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 60 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 119 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + + PE++ S ++DI++FGV+M E+ S GK P + H+
Sbjct: 175 ETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
Query: 286 PTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
+R LY P + SE K + + +C RP K
Sbjct: 235 AQGLR----------LYRPHL-----------ASE----KVYTIMYSCWHEKADERPTFK 269
Query: 346 QVLWKLEDL 354
+L + D+
Sbjct: 270 ILLSNILDV 278
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK +G +++ + +V++ R+ E + L RH N+ LG
Sbjct: 15 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LG 67
Query: 134 FYA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH- 186
F A G + +V +++ G+L + + + ++++ A GL +LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG---MIKLALSTASGLAHLHM 124
Query: 187 ----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL---HLLLNPTAGQEMLEASASQGY 239
T I H +LKSKNIL+ +N ++D GL H T ++ Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 240 KAPEL----IKMK--DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
APE+ I MK ++ + DIY+ G++ E I+ + I ED+ LP +
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG---GIHEDYQLPYY 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK +G +++ + +V++ R+ E + L RH N+ LG
Sbjct: 12 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LG 64
Query: 134 FYA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH- 186
F A G + +V +++ G+L + + + ++++ A GL +LH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG---MIKLALSTASGLAHLHM 121
Query: 187 ----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL---HLLLNPTAGQEMLEASASQGY 239
T I H +LKSKNIL+ +N ++D GL H T ++ Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 240 KAPEL----IKMK--DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
APE+ I MK ++ + DIY+ G++ E I+ + I ED+ LP +
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG---GIHEDYQLPYY 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 191 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 249 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 301
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 85 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H NL ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 143 MAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 85 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA-----GQEMLEASAS 236
+ YL+ + +H +L ++N ++ ++ + DFG+ + TA G+ +L
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR-- 197
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 35/235 (14%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK +G +++ + +V++ R+ E + L RH N+ LG
Sbjct: 35 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LG 87
Query: 134 FYA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH- 186
F A G + +V +++ G+L + + + ++++ A GL +LH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG---MIKLALSTASGLAHLHM 144
Query: 187 ----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---Y 239
T I H +LKSKNIL+ +N ++D GL + + + + G Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 240 KAPEL----IKMK--DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
APE+ I MK ++ + DIY+ G++ E I+ + I ED+ LP +
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG---GIHEDYQLPYY 255
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 75 EVIGKSNYGTLYKALLQ-RSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E IGK +G +++ + +V++ R+ E + L RH N+ LG
Sbjct: 48 ESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML----RHENI---LG 100
Query: 134 FYA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLH- 186
F A G + +V +++ G+L + + + ++++ A GL +LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEG---MIKLALSTASGLAHLHM 157
Query: 187 ----TGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL---HLLLNPTAGQEMLEASASQGY 239
T I H +LKSKNIL+ +N ++D GL H T ++ Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 240 KAPEL----IKMK--DASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTF 288
APE+ I MK ++ + DIY+ G++ E I+ + I ED+ LP +
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIG---GIHEDYQLPYY 268
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 86 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H NL ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 144 MAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 199 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 231
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 205 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 263 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 315
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 363
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLG-ACTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 133 LEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 189
Query: 212 YVSDFGLHLLLNPT-AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 190 KIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 250 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 284
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 285 MRDCWHAVPSQRPTFKQL---VEDLDR 308
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 60 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQ 118
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 119 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFHL 285
+ + + PE++ S ++DI++FGV+M E+ S GK P + H+
Sbjct: 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
Query: 286 PTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
+R LY P + SE K + + +C RP K
Sbjct: 235 AQGLR----------LYRPHL-----------ASE----KVYTIMYSCWHEKADERPTFK 269
Query: 346 QVLWKLEDL 354
+L + D+
Sbjct: 270 ILLSNILDV 278
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK-----MK 248
+H ++K N+LLD N ++DFG L +N + A + Y +PE+++ M
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
E D +S GV M E++ G+ P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I + Y+H+ + H +LK +N+L D ++ + DFGL + S
Sbjct: 117 IVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 238 GYKAPELIKMKD-ASEETDIYSFGVIMLELISGKEPINEN 276
Y APELI+ K E D++S G+++ L+ G P +++
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 92/219 (42%), Gaps = 27/219 (12%)
Query: 73 PGEVIGKSNYGTLYKALLQRSGSVRLLRFLR-PVCTTRDKEFGDLIELLGCIRHPNLVPL 131
P + +G+ +G +++A + ++ +R P ++ ++ L + HP +V
Sbjct: 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 132 LGFY-----------AGPRGEKLIVHPFYKRGNLAQCIRGG-SGEAHKWSIIYRISIGIA 179
+ + P+ I ++ NL + G + E + S+ I + IA
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL----------HLLLNPT-AGQ 228
+++LH+ + ++H +LK NI + V DFGL +L P A
Sbjct: 129 EAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 229 EMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELI 267
++ Y +PE I S + DI+S G+I+ EL+
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 102/255 (40%), Gaps = 43/255 (16%)
Query: 107 TTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 166
+ + EF + +++ + H LV L G R I+ + G L +R
Sbjct: 45 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-PIFIITEYMANGCLLNYLREMRHRFQ 103
Query: 167 KWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTA 226
++ + + ++YL + + +H +L ++N L++ VSDFGL +
Sbjct: 104 TQQLL-EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD- 158
Query: 227 GQEMLEASASQG------YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTP 279
E ++S+G + PE++ S ++DI++FGV+M E+ S GK P
Sbjct: 159 -----EYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS 213
Query: 280 DEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPS 339
+ H+ +R LY P + SE K + + +C
Sbjct: 214 ETAEHIAQGLR----------LYRPHL-----------ASE----KVYTIMYSCWHEKAD 248
Query: 340 LRPNIKQVLWKLEDL 354
RP K +L + D+
Sbjct: 249 ERPTFKILLSNILDV 263
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIK-----MK 248
+H ++K N+LLD N ++DFG L +N + A + Y +PE+++ M
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 249 DASEETDIYSFGVIMLELISGKEPI 273
E D +S GV M E++ G+ P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 17/109 (15%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPY---VSDF--GLHLLLN----PTAGQ 228
+A LD+LH ++ I H +LK +NIL + Q + DF G + LN P +
Sbjct: 120 VASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 229 EMLEASASQGYKAPELIKM--KDAS---EETDIYSFGVIMLELISGKEP 272
E+L S Y APE+++ ++AS + D++S GVI+ L+SG P
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 124 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 176
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 65 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 123 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 175
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 124 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 176
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 124 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 176
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML----EA 233
I G+ YLH + IH +L ++N+LLD + + DFGL + G E +
Sbjct: 143 ICEGMAYLHAQHY---IHRDLAARNVLLDNDRLVKIGDFGLAKAV--PEGHEXYRVREDG 197
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPT 278
+ + APE +K +D++SFGV + EL++ + PT
Sbjct: 198 DSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT 242
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 15/168 (8%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISI 176
IE+L + HP ++ + F+ + IV + G L + G +Y +
Sbjct: 72 IEILKKLNHPCIIKIKNFFDAE--DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 177 GIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP---YVSDFGLHLLLNPTAGQEMLEA 233
+A + YLH IIH +LK +N+LL + ++DFG +L T+ L
Sbjct: 130 LLA--VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL-- 182
Query: 234 SASQGYKAPE-LIKMKDA--SEETDIYSFGVIMLELISGKEPINENPT 278
+ Y APE L+ + A + D +S GVI+ +SG P +E+ T
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 82 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 140 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 194
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 195 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 227
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 85 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 197
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA L+ IIH ++K NIL+ V DFG+ + +G + + +A
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAVI 180
Query: 238 G---YKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
G Y +PE + +D+YS G ++ E+++G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 40/280 (14%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLI---ELLGCIRHPNLVPLLG 133
IG+ + +Y+A G L+ ++ K D I +LL + HPN++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVI---K 96
Query: 134 FYAG--PRGEKLIVHPFYKRGNLAQCIRGGSGEAH--KWSIIYRISIGIAGGLDYLHTGF 189
+YA E IV G+L++ I+ + +++ + + L+++H+
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS-- 154
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNP--TAGQEMLEASASQGYKAPELIKM 247
R ++H ++K N+ + + D GL + TA ++ + Y +PE I
Sbjct: 155 -RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV---GTPYYMSPERIHE 210
Query: 248 KDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDML 307
+ ++DI+S G ++ E+ + + P + M L +I +P +
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDK-----------MNLYSLCKKIEQCDYPPL- 258
Query: 308 LCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
S+H SEE QL C +P P RP++ V
Sbjct: 259 ---PSDH---YSEE----LRQLVNMCINPDPEKRPDVTYV 288
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 85 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 197
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 90/220 (40%), Gaps = 45/220 (20%)
Query: 75 EVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIE----LLGCIRHPNLVP 130
+VIGK ++G + A + ++ L+ + KE ++ LL ++HP LV
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 131 L-LGFYAGPR---------GEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
L F + G +L H +R L R + E IA
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAE-------------IAS 150
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG-- 238
L YLH+ I++ +LK +NILLD ++DFGL +E +E +++
Sbjct: 151 ALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGL--------CKENIEHNSTTSTF 199
Query: 239 -----YKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE++ + D + G ++ E++ G P
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQAREPPG 132
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 189
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 250 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 284
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 285 MRDCWHAVPSQRPTFKQL---VEDLDR 308
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA L+ IIH ++K NI++ V DFG+ + +G + + +A
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVI 180
Query: 238 G---YKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPD 280
G Y +PE + +D+YS G ++ E+++G+ P + +PD
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPD 225
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 67 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 125
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 126 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 182
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 183 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 242
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 243 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 277
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 278 MRDCWHAVPSQRPTFKQL---VEDLDR 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 133 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 189
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 250 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 284
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 285 MRDCWHAVPSQRPTFKQL---VEDLDR 308
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML----EA 233
I G+ YLH + IH L ++N+LLD + + DFGL + G E +
Sbjct: 120 ICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDG 174
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF-----HLP-- 286
+ + APE +K +D++SFGV + EL++ + N +P F H
Sbjct: 175 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY---CDSNQSPHTKFTELIGHTQGQ 231
Query: 287 -TFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
T +R L R L PD C + + L C S RP +
Sbjct: 232 MTVLRLTELLERGERLPRPDRCPC---------------EIYHLMKNCWETEASFRPTFQ 276
Query: 346 QVL 348
++
Sbjct: 277 NLV 279
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 115 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 173
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 174 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 230
Query: 212 YVSDFGLHLLLNPT-AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 231 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 290
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 291 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 325
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 326 MRDCWHAVPSQRPTFKQL---VEDLDR 349
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEML----EA 233
I G+ YLH + IH L ++N+LLD + + DFGL + G E +
Sbjct: 121 ICEGMAYLHAQHY---IHRALAARNVLLDNDRLVKIGDFGLAKAV--PEGHEYYRVREDG 175
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDF-----HLP-- 286
+ + APE +K +D++SFGV + EL++ + N +P F H
Sbjct: 176 DSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTY---CDSNQSPHTKFTELIGHTQGQ 232
Query: 287 -TFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIK 345
T +R L R L PD C + + L C S RP +
Sbjct: 233 MTVLRLTELLERGERLPRPDRCPC---------------EIYHLMKNCWETEASFRPTFQ 277
Query: 346 QVL 348
++
Sbjct: 278 NLV 280
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 87 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 199
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 200 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 255
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 256 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 285
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 63 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 121
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 122 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 178
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 179 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 238
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 239 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 273
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 274 MRDCWHAVPSQRPTFKQL---VEDLDR 297
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEA 165
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 66 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 124
Query: 166 HKWSI--------------IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
++S + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 125 LEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 181
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 182 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 241
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 242 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 276
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 277 MRDCWHAVPSQRPTFKQL---VEDLDR 300
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI--RHPNLVPLLGF 134
IGK YG ++ R V + F TT + + E+ + RH N+ LGF
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFF----TTEEASWFRETEIYQTVLMRHENI---LGF 96
Query: 135 YA------GPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTG 188
A G + ++ +++ G+L ++ + +A + +++ GL +LHT
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKS---MLKLAYSSVSGLCHLHTE 153
Query: 189 FHR-----PIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YK 240
I H +LKSKNIL+ +N ++D GL + + + + G Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 241 APELIKMK------DASEETDIYSFGVIMLEL 266
PE++ + D+YSFG+I+ E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 77 IGKSNYGTLYKALLQRSGS-VRLLRFLR-------PVCTTRDKEFGDLIELLGCIRHPNL 128
IG+ +G ++KA +++G V L + L P+ R+ I++L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE------IKILQLLKHENV 79
Query: 129 VPLLGF-------YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI--IYRISIGIA 179
V L+ Y +G +V F + +LA + S K+++ I R+ +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL---SNVLVKFTLSEIKRVMQMLL 135
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL---LLNPTAGQEMLEASAS 236
GL Y+H I+H ++K+ N+L+ R+ ++DFGL L + +
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 237 QGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL 285
Y+ PE L+ +D D++ G IM E+ + + PI + T L
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 241
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA L+ IIH ++K NI++ V DFG+ + +G + + +A
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVI 180
Query: 238 G---YKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
G Y +PE + +D+YS G ++ E+++G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 77 IGKSNYGTLYKALLQRSGS-VRLLRFLR-------PVCTTRDKEFGDLIELLGCIRHPNL 128
IG+ +G ++KA +++G V L + L P+ R+ I++L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE------IKILQLLKHENV 79
Query: 129 VPLLGF-------YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI--IYRISIGIA 179
V L+ Y +G +V F + +LA + S K+++ I R+ +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL---SNVLVKFTLSEIKRVMQMLL 135
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL---LLNPTAGQEMLEASAS 236
GL Y+H I+H ++K+ N+L+ R+ ++DFGL L + +
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 237 QGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL 285
Y+ PE L+ +D D++ G IM E+ + + PI + T L
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 241
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA L+ IIH ++K NI++ V DFG+ + +G + + +A
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVI 180
Query: 238 G---YKAPELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
G Y +PE + +D+YS G ++ E+++G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA L+ IIH ++K NI++ V DFG+ + +G + + +A
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVI 180
Query: 238 G---YKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
G Y +PE + +D+YS G ++ E+++G+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
IA L+ IIH ++K NI++ V DFG+ + +G + + +A
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVI 197
Query: 238 G---YKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
G Y +PE + +D+YS G ++ E+++G+ P
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 77 IGKSNYGTLYKALLQRSGS-VRLLRFLR-------PVCTTRDKEFGDLIELLGCIRHPNL 128
IG+ +G ++KA +++G V L + L P+ R+ I++L ++H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE------IKILQLLKHENV 78
Query: 129 VPLLGF-------YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI--IYRISIGIA 179
V L+ Y +G +V F + +LA + S K+++ I R+ +
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL---SNVLVKFTLSEIKRVMQMLL 134
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL---LLNPTAGQEMLEASAS 236
GL Y+H I+H ++K+ N+L+ R+ ++DFGL L + +
Sbjct: 135 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 237 QGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL 285
Y+ PE L+ +D D++ G IM E+ + + PI + T L
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 240
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 22/224 (9%)
Query: 66 ICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRH 125
+ D+ + G +G+ YG +YKA + + + T I LL ++H
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH 77
Query: 126 PNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIR-GGSGEAHKWSI------IYRISIGI 178
PN++ L + K+ + Y +L I+ + +A+K + + + I
Sbjct: 78 PNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI 137
Query: 179 AGGLDYLHTGFHRPIIHGNLKSKNILL----DRNYQPYVSDFGLHLLLN----PTAGQEM 230
G+ YLH + ++H +LK NIL+ + ++D G L N P A ++
Sbjct: 138 LDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLA--DL 192
Query: 231 LEASASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPI 273
+ Y+APE L+ + ++ DI++ G I EL++ EPI
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPI 235
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLR-------PVCTTRDKEFGDLIELLGCIRHPNLV 129
+G+ Y T+YK + + ++ L+ +R P R+ + LL ++H N+V
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIRE------VSLLKDLKHANIV 63
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L + L+ Y +L Q + G + + GL Y H
Sbjct: 64 TLHDIIHTEKSLTLVFE--YLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCH--- 117
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN-PTAGQEMLEASASQGYKAPE-LIKM 247
+ ++H +LK +N+L++ + ++DFGL + PT + + Y+ P+ L+
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD--NEVVTLWYRPPDILLGS 175
Query: 248 KDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL 285
D S + D++ G I E+ +G+ P+ T +E H
Sbjct: 176 TDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEEQLHF 212
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 99/215 (46%), Gaps = 32/215 (14%)
Query: 74 GEVIGKSNYGTLYKALLQRSG-------SVRLLRFLRPVCTTRDKEFGDLIELLGCIRHP 126
E +G+ + ++K + + G + LL+ L + F + ++ + H
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 127 NLVPLLGF-YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLD 183
+LV G + G E ++V F K G+L ++ +I++++ + +A +
Sbjct: 73 HLVLNYGVCFCG--DENILVQEFVKFGSLDTYLKKNKNCI---NILWKLEVAKQLAWAMH 127
Query: 184 YLHTGFHRPIIHGNLKSKNILLDRNYQ------PYV--SDFGLHLLLNPTAGQEMLEASA 235
+L +IHGN+ +KNILL R P++ SD G+ + + P +++L+
Sbjct: 128 FLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP---KDILQERI 181
Query: 236 SQGYKAPELIKM-KDASEETDIYSFGVIMLELISG 269
+ PE I+ K+ + TD +SFG + E+ SG
Sbjct: 182 P--WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 85 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 143 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 197
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 198 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 230
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 84 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 142 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 196
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 197 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 252
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 253 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 282
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASE- 252
+H ++K NIL+D N ++DFG L L + A + Y +PE+++ + +
Sbjct: 197 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 253 ----ETDIYSFGVIMLELISGKEPI 273
E D +S GV M E++ G+ P
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 87 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 145 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 199
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 200 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 255
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 256 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 285
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + + ++ CT+ R+K + + + HP++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 74 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA----YL 127
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 128 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 77 IGKSNYGTLYKA----LLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y+ +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHK--------WSIIYRISIGIAGG 181
LLG + +G+ L+V G+L +R EA + +++ IA G
Sbjct: 84 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ + +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 142 MAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 196
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
+ APE +K + +D++SFGV++ E+ S E
Sbjct: 197 --WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE 229
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 156 QCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNY--QPYV 213
Q I G +G K S + ++ I + L+Y+H +HG++K+ N+LL Q Y+
Sbjct: 139 QKISGQNGTFKK-STVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYL 194
Query: 214 SDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA------SEETDIYSFGVIMLELI 267
+D+GL P + + + +G+ DA S +D+ G ML +
Sbjct: 195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL 254
Query: 268 SGKEPINEN 276
GK P +N
Sbjct: 255 CGKLPWEQN 263
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 129/297 (43%), Gaps = 53/297 (17%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 115 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 173 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 227
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 228 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 283
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVLWKLED 353
PDML F+L C +P +RP+ +++ +++
Sbjct: 284 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL----HLLLN---- 223
+R+ I L Y+H+ + IIH NLK NI +D + + DFGL H L+
Sbjct: 119 WRLFRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 224 -----PTAGQEMLEASASQGYKAPELIK-MKDASEETDIYSFGVIMLELI----SGKEPI 273
P + + A + Y A E++ +E+ D YS G+I E I +G E +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERV 235
Query: 274 N 274
N
Sbjct: 236 N 236
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 86 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 199 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 254
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 255 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 284
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 80 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 138 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 192
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 193 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 248
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 249 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 278
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSG---SVRLLRFLR----PVCTTRD-KEFGDLIELLGCIRHP 126
EVIGK + + + + + +G +V+++ + P +T D K + +L +HP
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 86
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDY 184
++V LL Y+ G +V F +L I R +G + ++ I L Y
Sbjct: 87 HIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 185 LHTGFHRPIIHGNLKSKNILL--DRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQG--- 238
H IIH ++K +LL N P + FG+ + L G+ L A G
Sbjct: 146 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL----GESGLVAGGRVGTPH 198
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
+ APE++K + + D++ GVI+ L+SG P
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 93 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 150
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 205
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 206 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 261
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 262 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 291
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + L ++ CT+ R+K + + + HP++
Sbjct: 12 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 70
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 71 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 124
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 125 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 97/214 (45%), Gaps = 30/214 (14%)
Query: 74 GEVIGKSNYGTLYKALLQRSG-------SVRLLRFLRPVCTTRDKEFGDLIELLGCIRHP 126
E +G+ + ++K + + G + LL+ L + F + ++ + H
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--IAGGLDY 184
+LV G E ++V F K G+L ++ +I++++ + +A + +
Sbjct: 73 HLVLNYGVCVCG-DENILVQEFVKFGSLDTYLKKNKNCI---NILWKLEVAKQLAAAMHF 128
Query: 185 LHTGFHRPIIHGNLKSKNILLDRNYQ------PYV--SDFGLHLLLNPTAGQEMLEASAS 236
L +IHGN+ +KNILL R P++ SD G+ + + P +++L+
Sbjct: 129 LE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP---KDILQERIP 182
Query: 237 QGYKAPELIKM-KDASEETDIYSFGVIMLELISG 269
+ PE I+ K+ + TD +SFG + E+ SG
Sbjct: 183 --WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 86 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 144 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 198
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 199 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 254
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 255 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 284
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 78 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 135
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 136 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR-- 190
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 191 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 246
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDMLL +L C +P +RP+ +++
Sbjct: 247 PDN---CPDMLL-------------------ELMRMCWQYNPKMRPSFLEII 276
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + L ++ CT+ R+K + + + HP++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 74 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 127
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 128 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + L ++ CT+ R+K + + + HP++
Sbjct: 17 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 75
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 76 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 129
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 130 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 186
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 187 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGG 181
+HPN++ L Y + +V K G L I + E ++++ I+ +
Sbjct: 74 QHPNIITLKDVYDDGK-YVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV--- 129
Query: 182 LDYLHTGFHRPIIHGNLKSKNIL-LDRNYQP---YVSDFGLHLLLNPTAGQEMLEASASQ 237
+YLH + ++H +LK NIL +D + P + DFG L G + +
Sbjct: 130 -EYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LXTPCYTA 184
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENP--TPDE 281
+ APE+++ + DI+S GV++ ++G P P TP+E
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEE 230
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 17/241 (7%)
Query: 42 QSKNGGEEGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRF 101
++ + E + ED T D I G IG+ +G +++ + + +
Sbjct: 363 ETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVA 422
Query: 102 LRPV--CTTRDKEFGDLIELLGC--IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQC 157
++ CT+ L E L HP++V L+G I+ G L
Sbjct: 423 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSF 480
Query: 158 IRGGSGEAHKWSII---YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVS 214
++ S+I Y++S +A YL + + +H ++ ++N+L+ N +
Sbjct: 481 LQVRKFSLDLASLILYAYQLSTALA----YLES---KRFVHRDIAARNVLVSSNDCVKLG 533
Query: 215 DFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLE-LISGKEPI 273
DFGL + + + + + APE I + + +D++ FGV M E L+ G +P
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 274 N 274
Sbjct: 594 Q 594
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL----HLLLN---- 223
+R+ I L Y+H+ + IIH +LK NI +D + + DFGL H L+
Sbjct: 119 WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 224 -----PTAGQEMLEASASQGYKAPELIK-MKDASEETDIYSFGVIMLELI----SGKEPI 273
P + + A + Y A E++ +E+ D+YS G+I E+I +G E +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235
Query: 274 N 274
N
Sbjct: 236 N 236
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + L ++ CT+ R+K + + + HP++
Sbjct: 43 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 101
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 102 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 155
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 156 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 212
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 213 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + L ++ CT+ R+K + + + HP++
Sbjct: 18 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 76
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 77 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 130
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 131 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 187
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 188 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 172 YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL----HLLLN---- 223
+R+ I L Y+H+ + IIH +LK NI +D + + DFGL H L+
Sbjct: 119 WRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 224 -----PTAGQEMLEASASQGYKAPELIK-MKDASEETDIYSFGVIMLELI----SGKEPI 273
P + + A + Y A E++ +E+ D+YS G+I E+I +G E +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERV 235
Query: 274 N 274
N
Sbjct: 236 N 236
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 75 EVIGKSNYGTLYKALLQRSG---SVRLLRFLR----PVCTTRD-KEFGDLIELLGCIRHP 126
EVIGK + + + + + +G +V+++ + P +T D K + +L +HP
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML---KHP 88
Query: 127 NLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIGIAGGLDY 184
++V LL Y+ G +V F +L I R +G + ++ I L Y
Sbjct: 89 HIVELLETYSSD-GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 185 LHTGFHRPIIHGNLKSKNILL--DRNYQPY-VSDFGLHLLLNPTAGQEMLEASASQG--- 238
H IIH ++K +LL N P + FG+ + L G+ L A G
Sbjct: 148 CHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL----GESGLVAGGRVGTPH 200
Query: 239 YKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
+ APE++K + + D++ GVI+ L+SG P
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 136 AGPRGEKLIVHPFYKRGNLAQCI-RGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPII 194
+ P+ I ++ NL + R S E + + I I IA +++LH+ + ++
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS---KGLM 186
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEM----LEASASQG-------YKAPE 243
H +LK NI + V DFGL ++ ++ + A A+ Y +PE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPE 246
Query: 244 LIKMKDASEETDIYSFGVIMLELI 267
I + S + DI+S G+I+ EL+
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + L ++ CT+ R+K + + + HP++
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 78
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 79 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 132
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 133 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 190 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRG----- 160
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 59 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 117
Query: 161 ---------GSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
E + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 118 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 174
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 175 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 234
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 235 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 269
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 270 MRDCWHAVPSQRPTFKQL---VEDLDR 293
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 153 NLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP- 211
NL + I+ + ++ + + I LD LH IIH +LK +NILL + +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240
Query: 212 -YVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISG 269
V DFG + Q + S+ Y+APE+I D++S G I+ EL++G
Sbjct: 241 IKVIDFGSSCYEH----QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 124 RHPNLVPLLGF--YAGPRGEKLIVHPFYKRGNLAQCIRGGS--------GEAHKWSIIYR 173
+H N+V LLG + GP L++ + G+L +R + G + +
Sbjct: 108 QHENIVNLLGACTHGGPV---LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH ++ ++N+LL + + DFGL ++N +
Sbjct: 165 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 221
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
A + APE I + ++D++S+G+++ E+ S + NP P + N+
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP-------YPGILVNS 270
Query: 293 VLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ D Y + N + + AC + P+ RP +Q+
Sbjct: 271 KFYKLVKDGYQMAQPAFAPKN------------IYSIMQACWALEPTHRPTFQQI 313
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 153 NLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP- 211
NL + I+ + ++ + + I LD LH IIH +LK +NILL + +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240
Query: 212 -YVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISG 269
V DFG + Q + S+ Y+APE+I D++S G I+ EL++G
Sbjct: 241 IKVIDFGSSCYEH----QRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 9/119 (7%)
Query: 153 NLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP- 211
NL + I+ + ++ + + I LD LH IIH +LK +NILL + +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSG 240
Query: 212 -YVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISG 269
V DFG + Q + S+ Y+APE+I D++S G I+ EL++G
Sbjct: 241 IKVIDFGSSCYEH----QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 52/267 (19%)
Query: 110 DKEFGDLI---ELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRG----- 160
+K+ DLI E++ I +H N++ LLG G ++ + +GNL + ++
Sbjct: 74 EKDLSDLISEMEMMKMIGKHKNIINLLGA-CTQDGPLYVIVEYASKGNLREYLQARRPPG 132
Query: 161 ---------GSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQP 211
E + + +A G++YL + + IH +L ++N+L+ +
Sbjct: 133 LEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 189
Query: 212 YVSDFGLHLLLNPTAG-QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-G 269
++DFGL ++ ++ + APE + + + ++D++SFGV++ E+ + G
Sbjct: 190 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLG 249
Query: 270 KEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQL 329
P P +E F L ++ HR+ + C+N + + +
Sbjct: 250 GSPYPGVPV-EELFKL---LKEG---HRMDKPSN-----CTN-------------ELYMM 284
Query: 330 AMACCSPSPSLRPNIKQVLWKLEDLGK 356
C PS RP KQ+ +EDL +
Sbjct: 285 MRDCWHAVPSQRPTFKQL---VEDLDR 308
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 74 GEVIGKSNYGTLYKAL----LQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLV 129
G+++G+ +YG + + L L R L + + I+LL +RH N++
Sbjct: 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 130 PLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGF 189
L+ +K+ + Y + + + + + + GL+YLH+
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS-- 127
Query: 190 HRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEAS-ASQGYKAPELIKMK 248
+ I+H ++K N+LL +S G+ L+P A + S S ++ PE+
Sbjct: 128 -QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186
Query: 249 D--ASEETDIYSFGVIMLELISGKEPI 273
D + + DI+S GV + + +G P
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 91/210 (43%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + + ++ CT+ R+K + + + HP++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 74 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA----YL 127
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ N + DFGL + + + + + APE I
Sbjct: 128 ES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 98/235 (41%), Gaps = 40/235 (17%)
Query: 124 RHPNLVPLLGF--YAGPRGEKLIVHPFYKRGNLAQCIRGGS--------GEAHKWSIIYR 173
+H N+V LLG + GP L++ + G+L +R + G + +
Sbjct: 100 QHENIVNLLGACTHGGPV---LVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH ++ ++N+LL + + DFGL ++N +
Sbjct: 157 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 213
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
A + APE I + ++D++S+G+++ E+ S + NP P + N+
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP-------YPGILVNS 262
Query: 293 VLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ D Y + N + + AC + P+ RP +Q+
Sbjct: 263 KFYKLVKDGYQMAQPAFAPKN------------IYSIMQACWALEPTHRPTFQQI 305
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 194 IHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM------ 247
+H ++K NILLDR ++DFG L L L A + Y +PE+++
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPG 243
Query: 248 -KDASEETDIYSFGVIMLELISGKEPINENPTPD 280
E D ++ GV E+ G+ P + T +
Sbjct: 244 TGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 102/230 (44%), Gaps = 35/230 (15%)
Query: 77 IGKSNYGTLYKALLQRSGS-VRLLRFLR-------PVCTTRDKEFGDLIELLGCIRHPNL 128
IG+ +G ++KA +++G V L + L P+ R+ I++L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE------IKILQLLKHENV 79
Query: 129 VPLLGF-------YAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSI--IYRISIGIA 179
V L+ Y + +V F + +LA + S K+++ I R+ +
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLL---SNVLVKFTLSEIKRVMQMLL 135
Query: 180 GGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL---LLNPTAGQEMLEASAS 236
GL Y+H I+H ++K+ N+L+ R+ ++DFGL L + +
Sbjct: 136 NGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 237 QGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHL 285
Y+ PE L+ +D D++ G IM E+ + + PI + T L
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLAL 241
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 75/179 (41%), Gaps = 43/179 (24%)
Query: 123 IRHPNLVPL------LGFY--------AGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKW 168
++HPN+V L GF+ G E ++ +Y + + CI
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQ-------- 138
Query: 169 SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPT 225
I ++++H I+H +LK +N+LL + ++DFGL + +
Sbjct: 139 ---------ILESVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE 186
Query: 226 AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
Q + + GY +PE+++ + DI++ GVI+ L+ G P DED H
Sbjct: 187 Q-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFW-----DEDQH 239
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 34/132 (25%)
Query: 164 EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN 223
E H +++Y + +G+ Y+H+ I+H +LK N L++++ V DFGL ++
Sbjct: 155 ELHIKTLLYNLLVGVK----YVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
Query: 224 -PTAGQEMLEAS-------------------------ASQGYKAPELIKMKDA-SEETDI 256
P G L S ++ Y+APELI +++ +E D+
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDV 267
Query: 257 YSFGVIMLELIS 268
+S G I EL++
Sbjct: 268 WSIGCIFAELLN 279
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 11/104 (10%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEA 233
I+ +A G+ YL R +H +L ++N L+ N ++DFGL + +A
Sbjct: 179 IARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLS---RNIYSADYYKA 232
Query: 234 SASQG----YKAPELIKMKDASEETDIYSFGVIMLELIS-GKEP 272
+ + PE I + E+D++++GV++ E+ S G +P
Sbjct: 233 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 125/292 (42%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R E S + +++ IA G
Sbjct: 80 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N + ++ + DFG+ + T G+ +L
Sbjct: 138 MAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 192
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 193 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 248
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDMLL +L C +P +RP+ +++
Sbjct: 249 PDN---CPDMLL-------------------ELMRMCWQYNPKMRPSFLEII 278
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 112 EFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWS 169
E G L+ L HPN++ L + P L++ G L I +G E
Sbjct: 98 EIGVLLRL----SHPNIIKLKEIFETPTEISLVLE-LVTGGELFDRIVEKGYYSERDAAD 152
Query: 170 IIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTA 226
+ +I +A YLH I+H +LK +N+L + ++DFGL ++
Sbjct: 153 AVKQILEAVA----YLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205
Query: 227 GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
M + GY APE+++ E D++S G+I L+ G EP
Sbjct: 206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 125/292 (42%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAH--------KWSIIYRISIGIAGG 181
LLG + +G+ L++ RG+L +R S + +++ IA G
Sbjct: 83 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 141 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 195
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 196 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 251
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 252 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG G+ A + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLAGTPE-YLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 77/320 (24%)
Query: 74 GEVIGKSNYGTLYKA----LLQRSG----SVRLLRFLRPVCTTRD--KEFGDLIELLGCI 123
G+ +G+ +G + KA L R+G +V++L+ RD EF +L +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN----VLKQV 83
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYK----RGNLAQCIRGGSG---------------- 163
HP+++ L G G L++ + K RG L + + G G
Sbjct: 84 NHPHVIKLYG-ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 164 --EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLL 221
A + + I+ G+ YL ++H +L ++NIL+ + +SDFG
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFG---- 195
Query: 222 LNPTAGQEMLEASASQG-----YKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
L+ +E SQG + A E + + ++D++SFGV++ E+++ + N
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 277 PTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENP--VSEERILKFFQLAMACC 334
P P + R+ + LL + E P SEE ++L + C
Sbjct: 252 PYP------------GIPPERLFN------LLKTGHRMERPDNCSEE----MYRLMLQCW 289
Query: 335 SPSPSLRPNIKQVLWKLEDL 354
P RP + LE +
Sbjct: 290 KQEPDKRPVFADISKDLEKM 309
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 171 IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNY---QPYVSDFGLHLLLNPTAG 227
+ R+ I G+ YLH I+H +LK +NILL Y + DFG+ +
Sbjct: 133 VIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC- 188
Query: 228 QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEP 272
E+ E + Y APE++ + TD+++ G+I L++ P
Sbjct: 189 -ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 77/320 (24%)
Query: 74 GEVIGKSNYGTLYKA----LLQRSG----SVRLLRFLRPVCTTRD--KEFGDLIELLGCI 123
G+ +G+ +G + KA L R+G +V++L+ RD EF +L +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN----VLKQV 83
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYK----RGNLAQCIRGGSG---------------- 163
HP+++ L G G L++ + K RG L + + G G
Sbjct: 84 NHPHVIKLYG-ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 164 --EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLL 221
A + + I+ G+ YL ++H +L ++NIL+ + +SDFG
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFG---- 195
Query: 222 LNPTAGQEMLEASASQG-----YKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
L+ +E SQG + A E + + ++D++SFGV++ E+++ + N
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 277 PTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENP--VSEERILKFFQLAMACC 334
P P + R+ + LL + E P SEE ++L + C
Sbjct: 252 PYP------------GIPPERLFN------LLKTGHRMERPDNCSEE----MYRLMLQCW 289
Query: 335 SPSPSLRPNIKQVLWKLEDL 354
P RP + LE +
Sbjct: 290 KQEPDKRPVFADISKDLEKM 309
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 97/241 (40%), Gaps = 17/241 (7%)
Query: 42 QSKNGGEEGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRF 101
++ + E + ED T D I G IG+ +G +++ + + +
Sbjct: 363 ETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVA 422
Query: 102 LRPV--CTTRDKEFGDLIELLGC--IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQC 157
++ CT+ L E L HP++V L+G I+ G L
Sbjct: 423 IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT--ENPVWIIMELCTLGELRSF 480
Query: 158 IRGGSGEAHKWSII---YRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVS 214
++ S+I Y++S +A YL + + +H ++ ++N+L+ +
Sbjct: 481 LQVRKFSLDLASLILYAYQLSTALA----YLES---KRFVHRDIAARNVLVSATDCVKLG 533
Query: 215 DFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLE-LISGKEPI 273
DFGL + + + + + APE I + + +D++ FGV M E L+ G +P
Sbjct: 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
Query: 274 N 274
Sbjct: 594 Q 594
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 27/175 (15%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH ++ ++N+LL + + DFGL ++N +
Sbjct: 171 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
A + APE I + ++D++S+G+++ E+ S + NP P + N+
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP-------YPGILVNS 276
Query: 293 VLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ D Y + N + + AC + P+ RP +Q+
Sbjct: 277 KFYKLVKDGYQMAQPAFAPKN------------IYSIMQACWALEPTHRPTFQQI 319
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 124/292 (42%), Gaps = 53/292 (18%)
Query: 77 IGKSNYGTLY----KALLQRSGSVRL-LRFLRPVCTTRDK-EFGDLIELLGCIRHPNLVP 130
+G+ ++G +Y K +++ R+ ++ + + R++ EF + ++ ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 131 LLGFYAGPRGE-KLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIG--------IAGG 181
LLG + +G+ L++ RG+L +R ++ S+ IA G
Sbjct: 93 LLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 150
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPT-----AGQEMLEASAS 236
+ YL+ +H +L ++N ++ ++ + DFG+ + T G+ +L
Sbjct: 151 MAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR-- 205
Query: 237 QGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDH 296
+ +PE +K + +D++SFGV++ E+ + E + + ++ M +LD
Sbjct: 206 --WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGGLLDK 261
Query: 297 RITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PDML F+L C +P +RP+ +++
Sbjct: 262 PDN---CPDML-------------------FELMRMCWQYNPKMRPSFLEII 291
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 27/175 (15%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH ++ ++N+LL + + DFGL ++N +
Sbjct: 169 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
A + APE I + ++D++S+G+++ E+ S + NP P + N+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP-------YPGILVNS 274
Query: 293 VLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ D Y + N + + AC + P+ RP +Q+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKN------------IYSIMQACWALEPTHRPTFQQI 317
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 27/175 (15%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH ++ ++N+LL + + DFGL ++N +
Sbjct: 169 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
A + APE I + ++D++S+G+++ E+ S + NP P + N+
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP-------YPGILVNS 274
Query: 293 VLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ D Y + N + + AC + P+ RP +Q+
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKN------------IYSIMQACWALEPTHRPTFQQI 317
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 90/210 (42%), Gaps = 19/210 (9%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPV--CTT---RDKEFGDLIELLGCIRHPNL 128
G IG+ +G +++ + + + ++ CT+ R+K + + + HP++
Sbjct: 15 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQ-FDHPHI 73
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSII---YRISIGIAGGLDYL 185
V L+G I+ G L ++ S+I Y++S +A YL
Sbjct: 74 VKLIGVIT--ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA----YL 127
Query: 186 HTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELI 245
+ + +H ++ ++N+L+ + DFGL + + + + + APE I
Sbjct: 128 ES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 246 KMKDASEETDIYSFGVIMLE-LISGKEPIN 274
+ + +D++ FGV M E L+ G +P
Sbjct: 185 NFRRFTSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 74/175 (42%), Gaps = 27/175 (15%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH ++ ++N+LL + + DFGL ++N +
Sbjct: 163 FSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 219
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
A + APE I + ++D++S+G+++ E+ S + NP P + N+
Sbjct: 220 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNP-------YPGILVNS 268
Query: 293 VLDHRITDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQV 347
+ D Y + N + + AC + P+ RP +Q+
Sbjct: 269 KFYKLVKDGYQMAQPAFAPKN------------IYSIMQACWALEPTHRPTFQQI 311
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 77/320 (24%)
Query: 74 GEVIGKSNYGTLYKA----LLQRSG----SVRLLRFLRPVCTTRD--KEFGDLIELLGCI 123
G+ +G+ +G + KA L R+G +V++L+ RD EF +L +
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFN----VLKQV 83
Query: 124 RHPNLVPLLGFYAGPRGEKLIVHPFYK----RGNLAQCIRGGSG---------------- 163
HP+++ L G G L++ + K RG L + + G G
Sbjct: 84 NHPHVIKLYG-ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 164 --EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLL 221
A + + I+ G+ YL ++H +L ++NIL+ + +SDFG
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFG---- 195
Query: 222 LNPTAGQEMLEASASQG-----YKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
L+ +E SQG + A E + + ++D++SFGV++ E+++ + N
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT----LGGN 251
Query: 277 PTPDEDFHLPTFMRNAVLDHRITDLYHPDMLLCSNSNHENP--VSEERILKFFQLAMACC 334
P P + R+ + LL + E P SEE ++L + C
Sbjct: 252 PYP------------GIPPERLFN------LLKTGHRMERPDNCSEE----MYRLMLQCW 289
Query: 335 SPSPSLRPNIKQVLWKLEDL 354
P RP + LE +
Sbjct: 290 KQEPDKRPVFADISKDLEKM 309
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Query: 74 GEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLG 133
E +G+ +G +++ + S + +F++ V T I +L RH N++ L
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVK-VKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 134 FYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGLDYLHTGFHRPI 193
+ E +++ F ++ + I + E ++ I+ + + L +LH+ I
Sbjct: 69 SFESME-ELVMIFEFISGLDIFERINTSAFELNEREIVSYVH-QVCEALQFLHS---HNI 123
Query: 194 IHGNLKSKNILLD--RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDAS 251
H +++ +NI+ R+ + +FG L P +L + Y APE+ + S
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE--YYAPEVHQHDVVS 181
Query: 252 EETDIYSFGVIMLELISGKEP 272
TD++S G ++ L+SG P
Sbjct: 182 TATDMWSLGTLVYVLLSGINP 202
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 29/137 (21%)
Query: 164 EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN 223
E H +I+Y + +G +++H IIH +LK N LL+++ V DFGL +N
Sbjct: 128 EEHIKTILYNLLLG----ENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
Query: 224 P---------------------TAGQEMLEASASQGYKAPELIKMKDA-SEETDIYSFGV 261
+++ ++ Y+APELI +++ ++ DI+S G
Sbjct: 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240
Query: 262 IMLELISGKEPINENPT 278
I EL++ + +PT
Sbjct: 241 IFAELLNMLQSHINDPT 257
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 43/179 (24%)
Query: 123 IRHPNLVPL------LGFY--------AGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKW 168
++HPN+V L GF+ G E ++ +Y + + CI+
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ-------- 111
Query: 169 SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILL---DRNYQPYVSDFGLHLLLNPT 225
I +++ H I+H +LK +N+LL + ++DFGL + +
Sbjct: 112 ---------ILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 226 AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
Q + + GY +PE+++ + D+++ GVI+ L+ G P DED H
Sbjct: 160 Q-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFW-----DEDQH 212
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 43/179 (24%)
Query: 123 IRHPNLVPL------LGFY--------AGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKW 168
++HPN+V L GF+ G E ++ +Y + + CI+
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ-------- 111
Query: 169 SIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILL---DRNYQPYVSDFGLHLLLNPT 225
I +++ H I+H +LK +N+LL + ++DFGL + +
Sbjct: 112 ---------ILESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 226 AGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
Q + + GY +PE+++ + D+++ GVI+ L+ G P DED H
Sbjct: 160 Q-QAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFW-----DEDQH 212
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 32/140 (22%)
Query: 164 EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN 223
E H +I+Y + +G ++H IIH +LK N LL+++ + DFGL +N
Sbjct: 130 EQHVKTILYNLLLGEK----FIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
Query: 224 P------------------------TAGQEMLEASASQGYKAPELIKMKDA-SEETDIYS 258
+++ ++ Y+APELI +++ + DI+S
Sbjct: 183 SDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWS 242
Query: 259 FGVIMLELISGKEPINENPT 278
G I EL++ + NPT
Sbjct: 243 TGCIFAELLNMMKSHINNPT 262
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFGL +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGL----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 12 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 68
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 69 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + E +
Sbjct: 127 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTEPCYTP 181
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 136 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWTLCGTP 188
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + + Y A
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT----WTLCGTPEYLA 227
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFGL +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGL----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 195
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 195
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 145 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 197
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTPEYLA 227
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWTLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTPEYLA 227
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 193 IIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
++H +LK +N+LL + ++DFGL + + Q + + GY +PE+++ +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKEA 182
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ DI++ GVI+ L+ G P DED H
Sbjct: 183 YGKPVDIWACGVILYILLVGYPPF-----WDEDQH 212
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLXGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGL-HLLLNPTAGQEMLE 232
S +A G+ +L + + IH +L ++NILL + DFGL + N +
Sbjct: 173 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + APE I + E+D++S+G+ + EL S G P P D F+
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFY 281
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH +L ++NILL + DFGL + N +
Sbjct: 168 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + APE I + E+D++S+G+ + EL S G P P D F+
Sbjct: 225 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFY 276
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH +L ++NILL + DFGL + N +
Sbjct: 150 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + APE I + E+D++S+G+ + EL S G P P D F+
Sbjct: 207 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFY 258
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 193 IIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
++H NLK +N+LL + ++DFGL + + Q + + GY +PE+++
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDP 189
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ D+++ GVI+ L+ G P DED H
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPFW-----DEDQH 219
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 175 SIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLEA 233
S +A G+ +L + + IH +L ++NILL + DFGL + N + A
Sbjct: 167 SYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 234 SASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
+ APE I + E+D++S+G+ + EL S G P P D F+
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFY 274
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 174 ISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHL-LLNPTAGQEMLE 232
S +A G+ +L + + IH +L ++NILL + DFGL + N +
Sbjct: 173 FSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 233 ASASQGYKAPELIKMKDASEETDIYSFGVIMLELIS-GKEPINENPTPDEDFH 284
A + APE I + E+D++S+G+ + EL S G P P D F+
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV-DSKFY 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 18/229 (7%)
Query: 56 VTFRGGE--DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEF 113
V F+G E + D +V+G G + + +R+G L+ L R +E
Sbjct: 14 VLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR-QEV 72
Query: 114 GDLIELLGCIRHPNLVPLLGFYAGPRGEK---LIVHPFYKRGNLAQCIRGGSGEAHKWSI 170
+ G P++V +L Y K LI+ + G L I+ +A
Sbjct: 73 DHHWQASG---GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTERE 129
Query: 171 IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYV---SDFGLHLLLNPTAG 227
I I + +LH+ I H ++K +N+L + V +DFG T
Sbjct: 130 AAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGF---AKETTQ 183
Query: 228 QEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
+ + Y APE++ + + D++S GVIM L+ G P N
Sbjct: 184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGF----AKRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 195 HGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQG---YKAPELIKMKDAS 251
H ++K +NIL+ + Y+ DFG+ + T +++ + + G Y APE A+
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGI---ASATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 252 EETDIYSFGVIMLELISGKEP 272
DIY+ ++ E ++G P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGF----AKRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGF----AKRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGF----AKRVKGRTWXLCGTPEYLA 207
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+L+D V+DFG +
Sbjct: 137 IVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGF----AKRVKGRTWXLCGTP 189
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 10/108 (9%)
Query: 164 EAHKWSIIYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLN 223
EA W + + +A +LH+ + ++H ++K NI L + + DFGL + L
Sbjct: 156 EAQVWGYLRDTLLALA----HLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208
Query: 224 PTAGQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKE 271
E+ E Y APEL++ + D++S G+ +LE+ E
Sbjct: 209 TAGAGEVQEGDPR--YMAPELLQGSYGT-AADVFSLGLTILEVACNME 253
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFG +
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF----AKRVKGRTWXLCGTP 202
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 18/238 (7%)
Query: 77 IGKSNYGTLYKALLQRSGSVRLLRFLRPV-----CTTRDKEFGDL---IELLGCIRHPNL 128
+G +G ++ A+ + +++F++ C D + G + I +L + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 129 VPLLGFYAGPRGEKLIVHPFYKRGNLAQCI-RGGSGEAHKWSIIYRISIGIAGGLDYLHT 187
+ +L + +L++ +L I R + S I+R + G YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG---YLRL 148
Query: 188 GFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPE-LIK 246
+ IIH ++K +NI++ ++ + DFG L G+ + Y APE L+
Sbjct: 149 ---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE--RGKLFYTFCGTIEYCAPEVLMG 203
Query: 247 MKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHRITDLYHP 304
E +++S GV + L+ + P E E P ++ + L ++ L P
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQP 261
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 178 IAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
I +YLH+ +I+ +LK +N+++D+ V+DFG +
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF----AKRVKGRTWXLCGTP 203
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPI 273
Y APE+I K ++ D ++ GV++ E+ +G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+++D+ V+DFG + Y A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF----AKRVKGRTWXLCGTPEYLA 207
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+++D+ V+DFG + Y A
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF----AKRVKGRTWXLCGTPEYLA 207
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+++D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFA----KRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ ++ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 193 IIHGNLKSKNILL--DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IIH +LK +NILL + + DFG L GQ + + S+ Y++PE++
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQL----GQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D++S G I++E+ +G EP+
Sbjct: 236 DLAIDMWSLGCILVEMHTG-EPL 257
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 12/157 (7%)
Query: 126 PNLVPLLGFYAGPRGEK---LIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAGGL 182
P++V +L Y K LI+ + G L I+ +A I I +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 183 DYLHTGFHRPIIHGNLKSKNILLDRNYQPYV---SDFGLHLLLNPTAGQEMLEASASQGY 239
+LH+ I H ++K +N+L + V +DFG T + + Y
Sbjct: 123 QFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGF---AKETTQNALQTPCYTPYY 176
Query: 240 KAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
APE++ + + D++S GVIM L+ G P N
Sbjct: 177 VAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 213
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 193 IIHGNLKSKNILL--DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IIH +LK +NILL + + DFG L GQ + + S+ Y++PE++
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQXIQSRFYRSPEVLLGMPY 216
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D++S G I++E+ +G EP+
Sbjct: 217 DLAIDMWSLGCILVEMHTG-EPL 238
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 18 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 74
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 75 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 133 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 187
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 188 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 226
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 13 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 69
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 70 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 128 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 182
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 183 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 221
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 19 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 75
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 76 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 134 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 188
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 189 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 227
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 12 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 68
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 69 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 127 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 181
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 182 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 193 IIHGNLKSKNILL--DRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKDA 250
IIH +LK +NILL + + DFG L GQ + + S+ Y++PE++
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL----GQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 251 SEETDIYSFGVIMLELISGKEPI 273
D++S G I++E+ +G EP+
Sbjct: 236 DLAIDMWSLGCILVEMHTG-EPL 257
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG G+ + A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF---AKRVKGRTWXLCGTPEAL-A 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
PE+I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 20 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 76
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 77 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 135 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 189
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 190 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 228
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 70
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 71 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 129 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 183
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 70
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 71 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 129 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 183
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 184 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 193 IIHGNLKSKNILLD---RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKMKD 249
++H +LK +N+LL + ++DFGL + + Q + + GY +PE+++
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDP 200
Query: 250 ASEETDIYSFGVIMLELISGKEPINENPTPDEDFH 284
+ D+++ GVI+ L+ G P DED H
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFW-----DEDQH 230
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 29/109 (26%)
Query: 193 IIHGNLKSKNILLDRNYQPY-VSDFGLHLLLNPTA------------------------- 226
I+H ++K N L +R + Y + DFGL + T
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 227 --GQEMLEASASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEP 272
Q++ + + G++APE L K + + D++S GVI L L+SG+ P
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 28 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 84
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 85 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 143 AIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 197
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 198 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 236
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 64 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 120
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 121 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 179 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 233
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 234 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 272
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 17/219 (7%)
Query: 65 TICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR 124
I D +V+G G + + +R+ L+ L+ C +E C
Sbjct: 58 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQC-- 114
Query: 125 HPNLVPLL----GFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAHKWSIIYRISIGIAG 180
P++V ++ YAG R LIV G L I+ +A I I
Sbjct: 115 -PHIVRIVDVYENLYAG-RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDR---NYQPYVSDFGLHLLLNPTAGQEMLEASASQ 237
+ YLH+ I H ++K +N+L N ++DFG T+ + +
Sbjct: 173 AIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF--AKETTSHNSLTTPCYTP 227
Query: 238 GYKAPELIKMKDASEETDIYSFGVIMLELISGKEPINEN 276
Y APE++ + + D++S GVIM L+ G P N
Sbjct: 228 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYKA 241
+YLH+ +I+ +LK +N+L+D+ V+DFG + Y A
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFA----KRVKGRTWXLCGTPEYLA 206
Query: 242 PELIKMKDASEETDIYSFGVIMLELISGKEPI 273
P +I K ++ D ++ GV++ E+ +G P
Sbjct: 207 PAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 74/162 (45%), Gaps = 15/162 (9%)
Query: 117 IELLGCIRHPNLVPLLGFYAGPRGEKL-IVHPFYKRGNLAQCIRGGSGEAHKWSIIYRIS 175
I +L + HPN+V L+ P + L +V +G + + + ++
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ-- 144
Query: 176 IGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA 235
+ G++YLH ++ IIH ++K N+L+ + ++DFG+ N G + L ++
Sbjct: 145 -DLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVS---NEFKGSDALLSNT 197
Query: 236 --SQGYKAPELIKMKD---ASEETDIYSFGVIMLELISGKEP 272
+ + APE + + + D+++ GV + + G+ P
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 50/230 (21%)
Query: 125 HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI--RGGSGEAHKWSIIYRISIG-IAGG 181
HP ++ LL ++ G L++ +L I +G GE R G +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPS-----RCFFGQVVAA 151
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLD-RNYQPYVSDFGLHLLLNPTAGQEMLEASASQGYK 240
+ + H+ R ++H ++K +NIL+D R + DFG LL+ + + ++ Y
Sbjct: 152 IQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH---DEPYTDFDGTRVYS 205
Query: 241 APELI-KMKDASEETDIYSFGVIMLELISGKEPIN-ENPTPDEDFHLPTFMRNAVLDHRI 298
PE I + + + ++S G+++ +++ G P + + + H P +
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVS-------- 257
Query: 299 TDLYHPDMLLCSNSNHENPVSEERILKFFQLAMACCSPSPSLRPNIKQVL 348
PD C+ L C +P PS RP+++++L
Sbjct: 258 -----PDC--CA------------------LIRRCLAPKPSSRPSLEEIL 282
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 23/136 (16%)
Query: 171 IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRN-----YQPYVSDFGLHLLLNPT 225
I +++ I +++LH+ + H +LK +NIL ++ Y P + L+NP
Sbjct: 120 IRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKR-DERTLINPD 175
Query: 226 A-----------GQEMLEASASQGYKAPELIKMKDASEETDIYSFGVIMLELISGKEPIN 274
+ +++ Y+APE+I S+ D++S G I++E G
Sbjct: 176 IKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG---FT 232
Query: 275 ENPTPDEDFHLPTFMR 290
PT D HL R
Sbjct: 233 VFPTHDSKEHLAMMER 248
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 221
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 27/191 (14%)
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI-RGGSGEAHKWSIIYRISIGIAGG 181
+RHPN+V P IV + G L + I G + ++ + G
Sbjct: 71 LRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISG 126
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPY--VSDFG------LHLLLNPTAGQEMLEA 233
+ Y H + H +LK +N LLD + P + DFG LH T G
Sbjct: 127 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG------ 177
Query: 234 SASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
+ Y APE L+K + + D++S GV + ++ G P E+P ++F T R
Sbjct: 178 --TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFR-KTIHRIL 233
Query: 293 VLDHRITDLYH 303
+ + I D H
Sbjct: 234 NVQYAIPDYVH 244
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 78/191 (40%), Gaps = 27/191 (14%)
Query: 123 IRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI-RGGSGEAHKWSIIYRISIGIAGG 181
+RHPN+V P IV + G L + I G + ++ + G
Sbjct: 72 LRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISG 127
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPY--VSDFG------LHLLLNPTAGQEMLEA 233
+ Y H + H +LK +N LLD + P + DFG LH T G
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG------ 178
Query: 234 SASQGYKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNA 292
+ Y APE L+K + + D++S GV + ++ G P E+P ++F T R
Sbjct: 179 --TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFR-KTIHRIL 234
Query: 293 VLDHRITDLYH 303
+ + I D H
Sbjct: 235 NVQYAIPDYVH 245
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 21/137 (15%)
Query: 171 IYRISIGIAGGLDYLHTGFHRPIIHGNLKSKNILLDRNY----QPYVSDFGLHLLLNPTA 226
+ ++S+ I L+Y+H +HG++K+ N+LL NY Q Y+ D+GL P
Sbjct: 154 VLQLSLRILDILEYIH---EHEYVHGDIKASNLLL--NYKNPDQVYLVDYGLAYRYCPEG 208
Query: 227 GQEMLEASASQGYKAPELIKMKDA------SEETDIYSFGVIMLELISGKEPINENPTPD 280
+ A + + DA S D+ G M++ ++G P +N
Sbjct: 209 VHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN---- 264
Query: 281 EDFHLPTFMRNAVLDHR 297
P ++R++ + +R
Sbjct: 265 --LKDPKYVRDSKIRYR 279
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 15/186 (8%)
Query: 122 CIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCI-RGGSGEAHKWSIIYRISIGIAG 180
+RHPN+V P IV + G L + I G + ++ +
Sbjct: 71 SLRHPNIVRFKEVILTP-THLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLIS 126
Query: 181 GLDYLHTGFHRPIIHGNLKSKNILLDRNYQPY--VSDFGLHLLLNPTAGQEMLEASASQG 238
G+ Y H + H +LK +N LLD + P ++DFG + A +
Sbjct: 127 GVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA--SVLHSQPKSAVGTPA 181
Query: 239 YKAPE-LIKMKDASEETDIYSFGVIMLELISGKEPINENPTPDEDFHLPTFMRNAVLDHR 297
Y APE L+K + + D++S GV + ++ G P E+P ++F T R + +
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFR-KTIHRILNVQYA 239
Query: 298 ITDLYH 303
I D H
Sbjct: 240 IPDYVH 245
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 187
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 187
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 190
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHD 216
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 187
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHD 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 191
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 207
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 192
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 206
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 191
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 192 GRSAAVWSLGILLYDMVCGDIPFEHD 217
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 207
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 182 LDYLHTGFHRPIIHGNLKSKNILLDRNYQPYVSDFGLHLLLNPTAGQEMLEASA-SQGYK 240
L+ +HT I+H +LK N L+ + DFG+ + P + ++ + Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 241 APELIKMKDASEET-----------DIYSFGVIMLELISGKEPINE 275
PE IK +S E D++S G I+ + GK P +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 226
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 227 GRSAAVWSLGILLYDMVCGDIPFEHD 252
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 206
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 207 GRSAAVWSLGILLYDMVCGDIPFEHD 232
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 214
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEHD 240
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 207
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 208 GRSAAVWSLGILLYDMVCGDIPFEHD 233
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 192
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFEHD 218
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 219
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 219
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 220
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 220
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 220
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFEHD 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 219
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHD 245
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 193 IIHGNLKSKNILLDRNY-QPYVSDFGLHLLLNPTAGQEMLEASASQGYKAPELIKM-KDA 250
++H ++K +NIL+D N + + DFG LL T + ++ Y PE I+ +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---DGTRVYSPPEWIRYHRYH 219
Query: 251 SEETDIYSFGVIMLELISGKEPINEN 276
++S G+++ +++ G P +
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFEHD 245
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.141 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,236,017
Number of Sequences: 62578
Number of extensions: 502875
Number of successful extensions: 3071
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 520
Number of HSP's that attempted gapping in prelim test: 1424
Number of HSP's gapped (non-prelim): 1082
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)