BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>038586
MALFSVLLFQLEPRIAESNSIIIRCIDEEKEALLTFEQSPVDEYGALSSWGREDDKRNCC
KWRGVCCNNTTSHFKVLNLRSSNDENARRKILKGTISSALLLCLNCMIYDIWTLVTINFG
GIPVPEFVGSLSKLSLNTVDHQGEIIHSVPEYPTLFDVEGYMASLVQILEKDQHDEGSQN
GQQGAEAEAVCIQHNQANDIPCSSNNNVQTVEFEGEMEHSLSEVYDIFDVERYSSSLDQI
LESERTEDHGDAAIQNKQQEAVEEEALLAQQNDPIELLCLDNILEIVESEVEIDSLPDRL
VFDVREFLSELDQIAEPRDEECGKLQAVAWEEEMGPLPVEFLSRVNQVLNRVM

High Scoring Gene Products

Symbol, full name Information P value
AT2G34930 protein from Arabidopsis thaliana 7.3e-09
AT5G23400 protein from Arabidopsis thaliana 0.00068

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  038586
        (353 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2044767 - symbol:AT2G34930 "AT2G34930" species...   164  7.3e-09   1
TAIR|locus:2154463 - symbol:AT5G23400 species:3702 "Arabi...   117  0.00068   1


>TAIR|locus:2044767 [details] [associations]
            symbol:AT2G34930 "AT2G34930" species:3702 "Arabidopsis
            thaliana" [GO:0006952 "defense response" evidence=ISS] [GO:0007165
            "signal transduction" evidence=IC] [GO:0005618 "cell wall"
            evidence=IDA] [GO:0050832 "defense response to fungus"
            evidence=IEP;IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
            GO:GO:0005618 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0050832
            eggNOG:COG4886 EMBL:AC004238 HOGENOM:HOG000116551
            InterPro:IPR013210 Pfam:PF08263 HSSP:P07359 EMBL:AF325082
            EMBL:AY063944 EMBL:AY117169 IPI:IPI00535568 PIR:T00475
            RefSeq:NP_181039.1 UniGene:At.19599 ProteinModelPortal:O64757
            SMR:O64757 PaxDb:O64757 PRIDE:O64757 EnsemblPlants:AT2G34930.1
            GeneID:818058 KEGG:ath:AT2G34930 TAIR:At2g34930 InParanoid:O64757
            OMA:ANELNGQ PhylomeDB:O64757 ProtClustDB:CLSN2913186
            ArrayExpress:O64757 Genevestigator:O64757 Uniprot:O64757
        Length = 905

 Score = 164 (62.8 bits), Expect = 7.3e-09, P = 7.3e-09
 Identities = 53/168 (31%), Positives = 83/168 (49%)

Query:     4 FSVLLFQLEPRIAESNSIIIRCIDEEKEALLTFEQSPVDEYGALSSWGREDDKRNCCKWR 63
             F +L+  L+  +   ++   +CI  E++ALLTF  +  D    L SW   D    CC W 
Sbjct:    13 FLILILLLK-NLNYGSAASPKCISTERQALLTFRAALTDLSSRLFSWSGPD----CCNWP 67

Query:    64 GVCCNNTTSHFKVLNLRS-SND---ENARRKILKGTISSALLLCLNCMIYDIWTLVTINF 119
             GV C+  TSH   ++LR+ S D   +  +R  L+G I  +L   L  + Y    L + +F
Sbjct:    68 GVLCDARTSHVVKIDLRNPSQDVRSDEYKRGSLRGKIHPSLTQ-LKFLSY--LDLSSNDF 124

Query:   120 GGIPVPEFVG---SLSKLSLNTVDHQGEIIHSVPEYPTLFDVEGYMAS 164
               + +PEF+G   SL  L+L++    GEI  S+     L  ++ Y  S
Sbjct:   125 NELEIPEFIGQIVSLRYLNLSSSSFSGEIPTSLGNLSKLESLDLYAES 172


>TAIR|locus:2154463 [details] [associations]
            symbol:AT5G23400 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006952 "defense
            response" evidence=ISS] [GO:0007165 "signal transduction"
            evidence=IC] [GO:0005618 "cell wall" evidence=IDA] [GO:0005829
            "cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
            Pfam:PF00560 InterPro:IPR001611 GO:GO:0009506 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0005618 eggNOG:COG4886
            InterPro:IPR013210 Pfam:PF08263 HOGENOM:HOG000066206 EMBL:AB018110
            EMBL:AY093083 EMBL:BT003360 IPI:IPI00537480 RefSeq:NP_197731.1
            UniGene:At.7017 ProteinModelPortal:Q9FHL8 SMR:Q9FHL8 PaxDb:Q9FHL8
            PRIDE:Q9FHL8 EnsemblPlants:AT5G23400.1 GeneID:832405
            KEGG:ath:AT5G23400 TAIR:At5g23400 InParanoid:Q9FHL8 OMA:RANRLCG
            PhylomeDB:Q9FHL8 ProtClustDB:CLSN2686144 ArrayExpress:Q9FHL8
            Genevestigator:Q9FHL8 Uniprot:Q9FHL8
        Length = 589

 Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
 Identities = 45/144 (31%), Positives = 68/144 (47%)

Query:    18 SNSIIIRCIDEEKEALLTFEQSPV-DEYGALSSWGREDDKRNCCK--WRGVCCNNTTSHF 74
             S+S  + C  +++  LL F+ S + D  G L SW  +D    CC   W GV CN  T   
Sbjct:    24 SSSQQVICSSQDRATLLGFKSSIIEDTTGVLDSWVGKD----CCNGDWEGVQCNPATGKV 79

Query:    75 KVLNLRSSNDENARRKILKGTISSAL--LLCLNCMIYDIWTLVTINFGGIPVP-EFVGSL 131
               L L+S+ +E      +KGT+S +L  L  L  ++      +T   G IP     + SL
Sbjct:    80 TGLVLQSAVNEPTL--YMKGTLSPSLGNLRSLELLLITGNKFIT---GSIPNSFSNLTSL 134

Query:   132 SKLSLNTVDHQGEIIHSVPEYPTL 155
              +L L+    QG ++ S+   P L
Sbjct:   135 RQLILDDNSLQGNVLSSLGHLPLL 158


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.134   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      353       339   0.00094  116 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  242 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.08u 0.11s 29.19t   Elapsed:  00:00:01
  Total cpu time:  29.08u 0.11s 29.19t   Elapsed:  00:00:01
  Start:  Sat May 11 13:34:36 2013   End:  Sat May 11 13:34:37 2013

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