BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038591
(82 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LV58|MBF1C_ARATH Multiprotein-bridging factor 1c OS=Arabidopsis thaliana GN=MBF1C
PE=1 SV=1
Length = 148
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/90 (64%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 1 KKTAGAVINMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSE 52
K TA VIN +KL+E TEP + IQ+ARL KKMSQ DLA QIN+R QVV E
Sbjct: 59 KSTAVPVINTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQE 118
Query: 53 YENGKAVPNQTVLAKMEKAIGVKLRVKIRK 82
YENGKAVPNQ VLAKMEK +GVKLR KI K
Sbjct: 119 YENGKAVPNQAVLAKMEKVLGVKLRGKIGK 148
>sp|O14467|MBF1_YEAST Multiprotein-bridging factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MBF1 PE=1 SV=2
Length = 151
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 4/71 (5%)
Query: 7 VINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLA 66
++ +KLD P+ R I RAR KKMSQ DLA +IN++P VV++YE +A+PNQ VL+
Sbjct: 71 IVKPKKLD----PNVGRAISRARTDKKMSQKDLATKINEKPTVVNDYEAARAIPNQQVLS 126
Query: 67 KMEKAIGVKLR 77
K+E+A+GVKLR
Sbjct: 127 KLERALGVKLR 137
>sp|Q9LXT3|MBF1B_ARATH Multiprotein-bridging factor 1b OS=Arabidopsis thaliana GN=MBF1B
PE=2 SV=1
Length = 142
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 59/85 (69%), Gaps = 8/85 (9%)
Query: 3 TAGAVINMRKLDEGTE--------PDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYE 54
++G +N +KLD+ TE + + I +AR KK++Q LA+ IN++PQV+ EYE
Sbjct: 57 SSGTSLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYE 116
Query: 55 NGKAVPNQTVLAKMEKAIGVKLRVK 79
+GKA+PNQ +L+K+E+A+G KLR K
Sbjct: 117 SGKAIPNQQILSKLERALGAKLRGK 141
>sp|Q9SJI8|MBF1A_ARATH Multiprotein-bridging factor 1a OS=Arabidopsis thaliana GN=MBF1A
PE=2 SV=1
Length = 142
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 57/85 (67%), Gaps = 8/85 (9%)
Query: 3 TAGAVINMRKLDEGTE--------PDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYE 54
++G +N + LD+ TE + + I +AR KK++Q LA IN++PQV+ EYE
Sbjct: 57 SSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYE 116
Query: 55 NGKAVPNQTVLAKMEKAIGVKLRVK 79
+GKA+PNQ +L+K+E+A+G KLR K
Sbjct: 117 SGKAIPNQQILSKLERALGAKLRGK 141
>sp|Q6FJN0|MBF1_CANGA Multiprotein-bridging factor 1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MBF1 PE=3 SV=1
Length = 151
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 7 VINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLA 66
++ +KLD + + I R R KKMSQ DLA +IN++P V+++YE G+A+PNQ VL
Sbjct: 71 IVKPKKLD----ANVGKTIARVRTEKKMSQKDLATKINEKPTVINDYEAGRAIPNQQVLG 126
Query: 67 KMEKAIGVKLRVK 79
KME+A+GVKLR K
Sbjct: 127 KMERALGVKLRGK 139
>sp|P14327|VSH7_DICDI Vegetative-specific protein H7 OS=Dictyostelium discoideum
GN=cinD-1 PE=2 SV=2
Length = 104
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 19 PDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLRV 78
P P+ IQRAR KM+Q +LA +IN+RP V++EYE+G A+P+Q VL+K+EKA+ VKLR
Sbjct: 37 PSVPQAIQRARNALKMTQKELAFKINERPGVINEYESGSAIPSQAVLSKLEKALNVKLRG 96
Query: 79 K 79
K
Sbjct: 97 K 97
>sp|Q752P7|MBF1_ASHGO Multiprotein-bridging factor 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MBF1
PE=3 SV=1
Length = 152
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 52/73 (71%), Gaps = 4/73 (5%)
Query: 7 VINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLA 66
++ +KLD P R I + R K M+Q DLA +IN++P V+++YE G+A+PNQ +LA
Sbjct: 72 IVKPKKLD----PSVGRAIAKGRGDKGMTQKDLATRINEKPTVINDYEAGRAIPNQQILA 127
Query: 67 KMEKAIGVKLRVK 79
KME+A+GVKLR K
Sbjct: 128 KMERALGVKLRGK 140
>sp|P69736|EDF1_RAT Endothelial differentiation-related factor 1 OS=Rattus norvegicus
GN=Edf1 PE=1 SV=1
Length = 148
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQR R K ++Q DLA +IN++PQV+++YE+G+A+P
Sbjct: 57 NTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIP 116
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N VL K+E+AIG+KLR K
Sbjct: 117 NNQVLGKIERAIGLKLRGK 135
>sp|Q9JMG1|EDF1_MOUSE Endothelial differentiation-related factor 1 OS=Mus musculus
GN=Edf1 PE=1 SV=1
Length = 148
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQR R K ++Q DLA +IN++PQV+++YE+G+A+P
Sbjct: 57 NTAKLDRETEELHHDRVTLEVGKVIQRGRQSKGLTQKDLATKINEKPQVIADYESGRAIP 116
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N VL K+E+AIG+KLR K
Sbjct: 117 NNQVLGKIERAIGLKLRGK 135
>sp|O94700|MBF1_SCHPO Multiprotein-bridging factor 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mbf1 PE=3 SV=1
Length = 148
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 45/53 (84%)
Query: 25 IQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
IQ+ R K +Q DL+ +IN++PQVV++YE+G+A+PNQ VL+KME+A+G+KLR
Sbjct: 82 IQKGRQAKGWAQKDLSQRINEKPQVVNDYESGRAIPNQQVLSKMERALGIKLR 134
>sp|Q6GPQ6|EDF1_XENLA Endothelial differentiation-related factor 1 homolog OS=Xenopus
laevis GN=edf1 PE=2 SV=1
Length = 147
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQ+ R GK M+Q DLA +IN++PQV+++YE GKA+P
Sbjct: 57 NTAKLDRETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIP 116
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N V+ K+E+ IG+KLR K
Sbjct: 117 NNQVMGKIERVIGLKLRGK 135
>sp|Q6BXQ8|MBF1_DEBHA Multiprotein-bridging factor 1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MBF1 PE=3 SV=1
Length = 150
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 54/73 (73%), Gaps = 4/73 (5%)
Query: 7 VINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLA 66
V+ +KLD + + IQ+AR KK++Q DLA +IN++P V+++YE G+AVPNQ +L
Sbjct: 71 VVPTKKLDM----NVGKAIQQARQEKKLTQKDLATKINEKPNVINDYEAGRAVPNQQLLG 126
Query: 67 KMEKAIGVKLRVK 79
K+E+A+GVKLR K
Sbjct: 127 KLERALGVKLRGK 139
>sp|Q6PBY3|EDF1_DANRE Endothelial differentiation-related factor 1 homolog OS=Danio rerio
GN=edf1 PE=2 SV=1
Length = 146
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQ+ R K ++Q DLA +IN++PQ+++EYE GKA+P
Sbjct: 56 NTAKLDRETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIP 115
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N V+ K+E+AIG+KLR K
Sbjct: 116 NNQVMGKIERAIGLKLRGK 134
>sp|Q5ZMC0|EDF1_CHICK Endothelial differentiation-related factor 1 homolog OS=Gallus
gallus GN=EDF1 PE=2 SV=1
Length = 148
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQ+ R K M+Q DLA +IN++PQV+++YE+G+A+P
Sbjct: 57 NTAKLDRETEELHHDRVPLEVGKVIQQGRQSKGMTQKDLATKINEKPQVIADYESGRAIP 116
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N V+ K+E+AIG+KLR K
Sbjct: 117 NNQVMGKIERAIGLKLRGK 135
>sp|O60869|EDF1_HUMAN Endothelial differentiation-related factor 1 OS=Homo sapiens
GN=EDF1 PE=1 SV=1
Length = 148
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQ+ R K ++Q DLA +IN++PQV+++YE+G+A+P
Sbjct: 57 NTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIP 116
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N VL K+E+AIG+KLR K
Sbjct: 117 NNQVLGKIERAIGLKLRGK 135
>sp|Q3T0V7|EDF1_BOVIN Endothelial differentiation-related factor 1 OS=Bos taurus GN=EDF1
PE=2 SV=1
Length = 148
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 8/79 (10%)
Query: 9 NMRKLDEGTEP--------DTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVP 60
N KLD TE + + IQ+ R K ++Q DLA +IN++PQV+++YE+G+A+P
Sbjct: 57 NTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIP 116
Query: 61 NQTVLAKMEKAIGVKLRVK 79
N VL K+E+AIG+KLR K
Sbjct: 117 NNQVLGKIERAIGLKLRGK 135
>sp|Q5A940|MBF1_CANAL Multiprotein-bridging factor 1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=MBF1 PE=3 SV=1
Length = 151
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 48/57 (84%)
Query: 23 RQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLRVK 79
+ IQ+AR KK++Q +LA ++N++P V+++YE G+A+PNQ +LAK+E+A+GVKLR K
Sbjct: 84 KAIQQARQEKKLTQKELATKVNEKPNVINDYEAGRAIPNQQLLAKLERALGVKLRGK 140
>sp|Q6CIP4|MBF1_KLULA Multiprotein-bridging factor 1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=MBF1 PE=3 SV=2
Length = 150
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 44/55 (80%)
Query: 25 IQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLRVK 79
IQ+ R K ++Q DLA +IN++P +V++YE+G+ +PNQ +L KME+A+G+KLR K
Sbjct: 85 IQKGRQDKNLTQKDLATKINEKPTIVNDYESGRGIPNQQILGKMERALGIKLRGK 139
>sp|Q8TG23|MBF1_YARLI Putative multi-protein-binding factor 1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=MBF1 PE=3 SV=1
Length = 152
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%)
Query: 18 EPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
E + I + R K ++Q +LA +IN++PQVV++YE+G+A PNQ VL+KME+ +G+KLR
Sbjct: 79 EASVGKAIIKGRSEKGLTQKELAVKINEKPQVVNDYESGRAQPNQQVLSKMERVLGIKLR 138
Query: 78 VK 79
K
Sbjct: 139 GK 140
>sp|P0CO30|MBF1_CRYNJ Multiprotein-bridging factor 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MBF1 PE=3 SV=1
Length = 150
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 31 GKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
GK M+Q +LA +N +PQ +++ E+G+AVP+Q +L K+E+ + VKLR
Sbjct: 89 GKSMTQKELATSVNAKPQDIADLESGRAVPDQALLGKLERKLNVKLR 135
>sp|P0CO31|MBF1_CRYNB Multiprotein-bridging factor 1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MBF1 PE=3 SV=1
Length = 150
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%)
Query: 31 GKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
GK M+Q +LA +N +PQ +++ E+G+AVP+Q +L K+E+ + VKLR
Sbjct: 89 GKSMTQKELATSVNAKPQDIADLESGRAVPDQALLGKLERKLNVKLR 135
>sp|Q53IP3|MBF1_GIBFU Multiprotein-bridging factor 1 OS=Gibberella fujikuroi GN=MBF1 PE=3
SV=1
Length = 152
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 33 KMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
KM+Q DLA + N +V+++E G A P+Q VL ME+ + VKLR
Sbjct: 94 KMTQKDLATRCNTTQAIVADFERGTAAPDQKVLGAMERVLNVKLR 138
>sp|Q5B8Y4|MBF1_EMENI Multiprotein-bridging factor 1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mbf1
PE=3 SV=1
Length = 154
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 26 QRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
+R G KM+Q +LA + N V+ ++E G A P+Q VL+ ME+ + +KLR
Sbjct: 90 RRTDEGYKMTQKELATKCNTTVTVIQDFERGTAAPDQKVLSAMERVLNIKLR 141
>sp|Q4WX89|MBF1_ASPFU Multiprotein-bridging factor 1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mbf1 PE=3
SV=1
Length = 154
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 31 GKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
G KM+Q +LA + N V+ ++E G A P+Q VL+ ME+ + +KLR
Sbjct: 95 GYKMTQKELATKCNTTITVIQDFERGTAAPDQKVLSAMERVLNIKLR 141
>sp|Q871W6|MBF1_NEUCR Multiprotein-bridging factor 1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mbf-1 PE=3 SV=1
Length = 160
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 25 IQRAR----LGKK-MSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKLR 77
IQ+AR +G K M+Q +LA + N ++++YE G+ VP+Q +L +E+ + VKLR
Sbjct: 88 IQKARSAIMIGDKAMTQKELATRCNSTQAIIAQYERGEGVPDQKLLGNLERVLNVKLR 145
>sp|O30257|Y2414_ARCFU Uncharacterized HTH-type transcriptional regulator AF_2414
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=AF_2414 PE=4 SV=1
Length = 229
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 SQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAI 72
SQ DLA ++ P V+S+YE+G+ P L K A+
Sbjct: 34 SQSDLARKLGISPSVISDYESGRRKPGTAFLKKFVCAL 71
>sp|A7MUV2|GLMM_VIBHB Phosphoglucosamine mutase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=glmM PE=3 SV=1
Length = 446
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 4 AGAVINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPN-- 61
+G VI + K+ G Q+ + +G +M+ DL+ + PQV+ EN + V N
Sbjct: 328 SGHVILLDKVTTGDAIVAALQVLASVVGSEMTLHDLSQGMTLYPQVL---ENVRFVGNSN 384
Query: 62 ----QTVL---AKMEKAIGVKLRVKIRK 82
Q VL A +E +G K RV +RK
Sbjct: 385 PLEAQAVLDSVAAVEAELGDKGRVLLRK 412
>sp|Q46A50|Y2318_METBF Putative HTH-type transcriptional regulatory protein Mbar_A2318
OS=Methanosarcina barkeri (strain Fusaro / DSM 804)
GN=Mbar_A2318 PE=3 SV=1
Length = 327
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 25 IQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGVKL 76
+++AR+G+ MS LA+ + + +S+YE + V+ ++E GV+L
Sbjct: 132 LKKARMGQSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLQLEDIFGVEL 183
>sp|O31943|YONR_BACSU SPBc2 prophage-derived uncharacterized HTH-type transcriptional
regulator YonR OS=Bacillus subtilis (strain 168)
GN=yonR PE=4 SV=1
Length = 108
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 25 IQRARLGKKMSQPDLANQINQRPQVVSEYENGKAVPNQTVLAKMEKAIGV 74
+++ R K SQ +A+ + Q +YE GKA P+ L K+ +GV
Sbjct: 6 LKKCRTSKGYSQQRMADFLGITRQGYGKYEIGKAEPDLKTLTKLSNILGV 55
>sp|A4WEY7|GLMM_ENT38 Phosphoglucosamine mutase OS=Enterobacter sp. (strain 638) GN=glmM
PE=3 SV=1
Length = 445
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 2 KTAGAVINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSE--YENGKAV 59
+ +G VI + K G Q+ A + M+ DL + + PQ++ + GK
Sbjct: 325 ENSGHVILLDKTTTGDGIVASLQVVAAMVRNHMNLHDLCSGMKMFPQILVNVRFTAGKGD 384
Query: 60 PNQ-----TVLAKMEKAIGVKLRVKIRK 82
P + V+A++E A+G + RV +RK
Sbjct: 385 PLENENVKAVMAEVEAALGNRGRVLLRK 412
>sp|Q87LZ7|GLMM_VIBPA Phosphoglucosamine mutase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=glmM PE=3 SV=1
Length = 446
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 2 KTAGAVINMRKLDEGTEPDTPRQIQRARLGKKMSQPDLANQINQRPQVVSEY----ENGK 57
+ +G VI + K+ G Q+ + +G MS DL+ + PQV+ EN
Sbjct: 326 ENSGHVILLDKVTTGDAIVAALQVLASVVGSDMSLHDLSQGMTLYPQVLENVRFAGEN-N 384
Query: 58 AVPNQTVLAKMEKA---IGVKLRVKIRK 82
+ Q VLA +E+ +G K RV +RK
Sbjct: 385 PLEAQAVLAAVEEVEAELGDKGRVLLRK 412
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.342
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,702,761
Number of Sequences: 539616
Number of extensions: 880278
Number of successful extensions: 1911
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1882
Number of HSP's gapped (non-prelim): 31
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)