Query 038592
Match_columns 478
No_of_seqs 356 out of 1978
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 21:56:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038592.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038592hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o4f_A Spermidine synthase; am 100.0 3.3E-31 1.1E-35 265.2 20.4 209 155-447 25-246 (294)
2 3gjy_A Spermidine synthase; AP 100.0 1.1E-28 3.9E-33 249.7 24.5 197 191-450 44-251 (317)
3 3c6k_A Spermine synthase; sper 100.0 5.9E-29 2E-33 256.1 19.8 197 155-428 149-354 (381)
4 1iy9_A Spermidine synthase; ro 99.9 2E-24 6.7E-29 214.2 25.2 207 155-446 17-236 (275)
5 1uir_A Polyamine aminopropyltr 99.9 8.3E-24 2.8E-28 213.6 23.3 211 155-446 19-242 (314)
6 2qfm_A Spermine synthase; sper 99.9 1.1E-23 3.6E-28 216.2 23.2 207 155-443 132-356 (364)
7 3adn_A Spermidine synthase; am 99.9 2.1E-24 7.2E-29 216.4 15.3 209 155-447 25-246 (294)
8 1mjf_A Spermidine synthase; sp 99.9 2.7E-22 9.3E-27 199.2 24.9 208 155-447 17-240 (281)
9 2i7c_A Spermidine synthase; tr 99.9 3.8E-22 1.3E-26 198.5 25.8 208 155-446 20-239 (283)
10 2b2c_A Spermidine synthase; be 99.9 9E-22 3.1E-26 199.0 24.8 209 155-447 50-270 (314)
11 1inl_A Spermidine synthase; be 99.9 1.2E-21 4E-26 196.2 23.1 209 155-446 32-252 (296)
12 2o07_A Spermidine synthase; st 99.9 8.7E-21 3E-25 190.8 23.0 209 155-447 37-257 (304)
13 2pt6_A Spermidine synthase; tr 99.9 2.5E-20 8.5E-25 188.9 25.4 209 155-447 58-278 (321)
14 3bwc_A Spermidine synthase; SA 99.9 3.9E-20 1.3E-24 185.8 24.8 213 155-447 34-259 (304)
15 2cmg_A Spermidine synthase; tr 99.8 1E-20 3.5E-25 186.6 15.8 194 155-447 15-217 (262)
16 1xj5_A Spermidine synthase 1; 99.8 3.7E-19 1.3E-23 181.4 22.9 209 155-446 62-283 (334)
17 3fpf_A Mtnas, putative unchara 99.3 3.2E-12 1.1E-16 128.0 7.6 143 262-449 122-267 (298)
18 3duw_A OMT, O-methyltransferas 99.2 4.1E-10 1.4E-14 106.0 18.5 106 263-406 59-167 (223)
19 3orh_A Guanidinoacetate N-meth 99.2 2.2E-11 7.7E-16 117.1 9.6 107 263-404 61-168 (236)
20 3dr5_A Putative O-methyltransf 99.2 2.2E-11 7.6E-16 116.4 9.5 102 264-406 58-164 (221)
21 1sui_A Caffeoyl-COA O-methyltr 99.2 1.4E-10 4.6E-15 112.7 13.0 107 263-405 80-189 (247)
22 3c3y_A Pfomt, O-methyltransfer 99.2 6.3E-11 2.2E-15 114.0 10.6 107 263-405 71-180 (237)
23 4dzr_A Protein-(glutamine-N5) 99.2 5.7E-11 2E-15 109.9 9.9 157 263-447 31-206 (215)
24 3tfw_A Putative O-methyltransf 99.2 1.9E-10 6.6E-15 111.2 12.8 104 263-406 64-170 (248)
25 1dus_A MJ0882; hypothetical pr 99.2 3.5E-10 1.2E-14 102.6 13.5 139 263-445 53-193 (194)
26 3ntv_A MW1564 protein; rossman 99.2 1.3E-10 4.5E-15 111.1 11.0 100 263-404 72-174 (232)
27 3p9n_A Possible methyltransfer 99.1 4E-10 1.4E-14 103.7 13.3 107 263-409 45-156 (189)
28 3r3h_A O-methyltransferase, SA 99.1 1E-10 3.4E-15 113.3 9.2 108 263-407 61-172 (242)
29 3c3p_A Methyltransferase; NP_9 99.1 1.8E-10 6.3E-15 107.7 9.6 100 263-405 57-159 (210)
30 3tr6_A O-methyltransferase; ce 99.1 3.5E-10 1.2E-14 106.5 11.4 106 263-405 65-173 (225)
31 2avd_A Catechol-O-methyltransf 99.1 6.4E-10 2.2E-14 105.0 12.0 106 263-405 70-178 (229)
32 3cbg_A O-methyltransferase; cy 99.1 5.7E-10 2E-14 106.7 11.6 105 263-406 73-182 (232)
33 3u81_A Catechol O-methyltransf 99.1 3.3E-10 1.1E-14 107.1 9.8 109 263-406 59-170 (221)
34 2hnk_A SAM-dependent O-methylt 99.0 4.4E-09 1.5E-13 100.5 16.4 116 263-406 61-181 (239)
35 3evz_A Methyltransferase; NYSG 99.0 1.3E-09 4.4E-14 102.9 12.0 155 263-448 56-222 (230)
36 3dxy_A TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.8E-14 104.3 11.5 130 263-423 35-165 (218)
37 2ozv_A Hypothetical protein AT 99.0 1.2E-09 4.2E-14 106.5 11.9 155 263-444 37-209 (260)
38 2esr_A Methyltransferase; stru 99.0 1E-09 3.5E-14 99.4 10.3 106 263-409 32-141 (177)
39 1zx0_A Guanidinoacetate N-meth 99.0 7.8E-10 2.7E-14 105.4 8.8 107 263-404 61-168 (236)
40 2fhp_A Methylase, putative; al 99.0 1.3E-09 4.6E-14 98.9 9.6 110 263-409 45-157 (187)
41 3hm2_A Precorrin-6Y C5,15-meth 99.0 4.8E-09 1.6E-13 94.5 12.4 122 263-430 26-149 (178)
42 2gpy_A O-methyltransferase; st 99.0 1.7E-09 5.8E-14 102.8 9.6 103 263-405 55-159 (233)
43 1l3i_A Precorrin-6Y methyltran 98.9 1.2E-08 4.2E-13 92.2 14.6 117 263-425 34-152 (192)
44 2igt_A SAM dependent methyltra 98.9 3.8E-09 1.3E-13 107.2 12.3 132 263-426 154-292 (332)
45 3lpm_A Putative methyltransfer 98.9 2.7E-09 9.4E-14 103.4 10.7 151 263-444 50-216 (259)
46 1xdz_A Methyltransferase GIDB; 98.9 4.3E-09 1.5E-13 100.8 11.6 120 263-423 71-191 (240)
47 2fpo_A Methylase YHHF; structu 98.9 2.4E-09 8.3E-14 100.2 9.6 107 263-409 55-163 (202)
48 1ws6_A Methyltransferase; stru 98.9 3.1E-09 1E-13 94.9 9.8 107 263-409 42-150 (171)
49 3njr_A Precorrin-6Y methylase; 98.9 7.5E-09 2.6E-13 97.2 12.9 114 263-424 56-170 (204)
50 4gek_A TRNA (CMO5U34)-methyltr 98.9 9.1E-09 3.1E-13 100.8 14.0 103 263-405 71-177 (261)
51 3e05_A Precorrin-6Y C5,15-meth 98.9 2E-09 6.8E-14 100.0 8.4 117 263-424 41-158 (204)
52 2fca_A TRNA (guanine-N(7)-)-me 98.9 6.1E-09 2.1E-13 98.4 11.7 130 263-424 39-169 (213)
53 1yzh_A TRNA (guanine-N(7)-)-me 98.9 5.7E-09 2E-13 97.9 10.8 130 263-424 42-172 (214)
54 2ift_A Putative methylase HI07 98.9 2.4E-09 8.2E-14 100.2 8.1 108 263-409 54-166 (201)
55 3grz_A L11 mtase, ribosomal pr 98.9 4.5E-09 1.5E-13 97.6 9.6 135 263-447 61-196 (205)
56 3mti_A RRNA methylase; SAM-dep 98.9 5.8E-09 2E-13 95.1 9.8 115 263-409 23-138 (185)
57 2b78_A Hypothetical protein SM 98.9 1.7E-08 5.8E-13 104.3 14.1 136 263-427 213-351 (385)
58 1fbn_A MJ fibrillarin homologu 98.9 2.5E-08 8.6E-13 94.8 14.2 143 263-446 75-228 (230)
59 2b3t_A Protein methyltransfera 98.9 1.1E-08 3.7E-13 100.1 11.8 148 263-444 110-274 (276)
60 3dlc_A Putative S-adenosyl-L-m 98.9 1.1E-08 3.9E-13 94.5 11.3 105 264-408 45-150 (219)
61 3mb5_A SAM-dependent methyltra 98.9 8.5E-09 2.9E-13 99.0 10.4 121 263-431 94-220 (255)
62 3ajd_A Putative methyltransfer 98.9 2.5E-08 8.7E-13 97.9 14.0 142 263-432 84-237 (274)
63 2gb4_A Thiopurine S-methyltran 98.8 5.4E-09 1.9E-13 101.9 8.9 104 263-404 69-189 (252)
64 1jsx_A Glucose-inhibited divis 98.8 3.7E-09 1.3E-13 98.0 7.3 103 263-410 66-169 (207)
65 3ofk_A Nodulation protein S; N 98.8 5.7E-08 2E-12 90.5 15.4 140 263-447 52-205 (216)
66 1g8a_A Fibrillarin-like PRE-rR 98.8 2E-08 6.8E-13 94.8 12.2 142 263-445 74-226 (227)
67 3eey_A Putative rRNA methylase 98.8 7.4E-09 2.5E-13 95.4 9.0 116 263-409 23-142 (197)
68 3hnr_A Probable methyltransfer 98.8 1.1E-07 3.7E-12 88.8 16.7 99 263-408 46-147 (220)
69 3ou2_A SAM-dependent methyltra 98.8 1.6E-08 5.6E-13 93.8 10.7 101 263-410 47-150 (218)
70 3ckk_A TRNA (guanine-N(7)-)-me 98.8 1.2E-08 4.1E-13 98.3 10.1 130 263-423 47-183 (235)
71 1wxx_A TT1595, hypothetical pr 98.8 3.6E-08 1.2E-12 101.5 14.3 114 263-409 210-328 (382)
72 4hg2_A Methyltransferase type 98.8 1.3E-08 4.4E-13 99.6 10.4 98 263-408 40-137 (257)
73 3lbf_A Protein-L-isoaspartate 98.8 1.1E-08 3.8E-13 95.1 9.4 99 263-408 78-176 (210)
74 3dtn_A Putative methyltransfer 98.8 1.8E-08 6E-13 95.2 10.8 102 263-408 45-150 (234)
75 3g89_A Ribosomal RNA small sub 98.8 3.2E-08 1.1E-12 96.2 12.7 121 263-424 81-202 (249)
76 2bm8_A Cephalosporin hydroxyla 98.8 2.3E-09 7.8E-14 103.3 4.6 98 263-406 82-187 (236)
77 3cgg_A SAM-dependent methyltra 98.8 8.5E-08 2.9E-12 86.8 14.7 121 263-426 47-168 (195)
78 2pwy_A TRNA (adenine-N(1)-)-me 98.8 2.7E-08 9.3E-13 95.1 12.0 117 263-426 97-217 (258)
79 2vdv_E TRNA (guanine-N(7)-)-me 98.8 1.1E-08 3.7E-13 98.4 8.8 130 263-423 50-188 (246)
80 3h2b_A SAM-dependent methyltra 98.8 7.7E-08 2.6E-12 88.8 13.9 103 263-409 42-144 (203)
81 3m6w_A RRNA methylase; rRNA me 98.8 4.5E-08 1.5E-12 103.7 13.8 134 263-428 102-251 (464)
82 2qy6_A UPF0209 protein YFCK; s 98.8 8.2E-09 2.8E-13 101.3 7.6 146 263-447 61-248 (257)
83 3kkz_A Uncharacterized protein 98.8 2.1E-08 7.3E-13 96.9 10.4 104 263-407 47-151 (267)
84 3c0k_A UPF0064 protein YCCW; P 98.8 5.6E-08 1.9E-12 100.4 14.2 119 263-409 221-342 (396)
85 3dh0_A SAM dependent methyltra 98.8 4.8E-08 1.6E-12 91.1 12.4 144 263-447 38-194 (219)
86 1pjz_A Thiopurine S-methyltran 98.8 4.5E-09 1.5E-13 98.4 5.3 101 263-401 23-135 (203)
87 2ex4_A Adrenal gland protein A 98.8 1.2E-08 4.1E-13 97.2 8.3 105 263-405 80-184 (241)
88 4htf_A S-adenosylmethionine-de 98.8 1.3E-08 4.5E-13 99.4 8.7 107 263-409 69-176 (285)
89 3g5l_A Putative S-adenosylmeth 98.8 3.6E-08 1.2E-12 94.3 11.4 103 263-408 45-147 (253)
90 1ej0_A FTSJ; methyltransferase 98.8 5.1E-08 1.7E-12 86.4 11.6 126 263-432 23-160 (180)
91 3i9f_A Putative type 11 methyl 98.8 4.9E-08 1.7E-12 87.5 11.6 98 263-409 18-115 (170)
92 4dcm_A Ribosomal RNA large sub 98.8 4E-08 1.4E-12 101.3 12.4 140 263-444 223-366 (375)
93 3cvo_A Methyltransferase-like 98.8 1.7E-08 5.8E-13 95.7 8.8 110 263-409 31-158 (202)
94 3dli_A Methyltransferase; PSI- 98.8 3.1E-08 1E-12 94.3 10.6 102 263-409 42-143 (240)
95 2as0_A Hypothetical protein PH 98.8 6.1E-08 2.1E-12 100.1 13.7 115 263-409 218-338 (396)
96 3pfg_A N-methyltransferase; N, 98.7 6.1E-08 2.1E-12 93.3 12.7 97 263-406 51-151 (263)
97 3bxo_A N,N-dimethyltransferase 98.7 4.4E-08 1.5E-12 92.3 11.4 104 263-409 41-144 (239)
98 2yxd_A Probable cobalt-precorr 98.7 1.4E-07 4.9E-12 84.6 14.3 113 263-425 36-148 (183)
99 1yb2_A Hypothetical protein TA 98.7 1.3E-08 4.3E-13 99.7 7.8 113 263-423 111-226 (275)
100 3hem_A Cyclopropane-fatty-acyl 98.7 2.3E-08 8E-13 98.7 9.8 109 263-409 73-186 (302)
101 3f4k_A Putative methyltransfer 98.7 3.3E-08 1.1E-12 94.5 10.6 103 263-406 47-150 (257)
102 4df3_A Fibrillarin-like rRNA/T 98.7 1.4E-07 4.6E-12 91.4 14.8 141 263-444 78-230 (233)
103 2nxc_A L11 mtase, ribosomal pr 98.7 5E-08 1.7E-12 94.7 11.8 119 263-429 121-240 (254)
104 3dmg_A Probable ribosomal RNA 98.7 4.3E-08 1.5E-12 101.3 11.8 140 263-446 234-373 (381)
105 3ocj_A Putative exported prote 98.7 3.3E-08 1.1E-12 97.9 10.3 108 263-408 119-229 (305)
106 3ujc_A Phosphoethanolamine N-m 98.7 3.1E-08 1.1E-12 94.7 9.8 106 263-408 56-161 (266)
107 3jwh_A HEN1; methyltransferase 98.7 3.5E-08 1.2E-12 92.4 9.9 103 263-406 30-141 (217)
108 2p7i_A Hypothetical protein; p 98.7 1.9E-08 6.4E-13 94.9 8.0 101 263-409 43-144 (250)
109 2yvl_A TRMI protein, hypotheti 98.7 2.9E-08 1E-12 94.3 9.5 117 263-427 92-209 (248)
110 2frn_A Hypothetical protein PH 98.7 9E-09 3.1E-13 101.4 5.8 117 263-424 126-247 (278)
111 3e23_A Uncharacterized protein 98.7 1.1E-07 3.8E-12 88.3 12.9 122 263-430 44-179 (211)
112 3e8s_A Putative SAM dependent 98.7 6.1E-08 2.1E-12 90.1 10.8 103 263-409 53-155 (227)
113 2xvm_A Tellurite resistance pr 98.7 3.3E-08 1.1E-12 90.3 8.8 102 263-404 33-134 (199)
114 1ixk_A Methyltransferase; open 98.7 7E-08 2.4E-12 96.9 11.9 132 263-426 119-266 (315)
115 1vl5_A Unknown conserved prote 98.7 6.6E-08 2.3E-12 92.9 11.2 102 263-405 38-139 (260)
116 2p35_A Trans-aconitate 2-methy 98.7 5.7E-08 2E-12 92.8 10.6 101 263-409 34-135 (259)
117 3g2m_A PCZA361.24; SAM-depende 98.7 1.7E-08 5.7E-13 99.6 7.0 108 263-409 83-193 (299)
118 3g07_A 7SK snRNA methylphospha 98.7 2.6E-08 9E-13 98.5 8.5 44 263-306 47-91 (292)
119 1i9g_A Hypothetical protein RV 98.7 6.7E-08 2.3E-12 93.9 11.2 114 263-423 100-218 (280)
120 3ccf_A Cyclopropane-fatty-acyl 98.7 8.6E-08 2.9E-12 93.4 11.8 100 263-409 58-157 (279)
121 1kpg_A CFA synthase;, cyclopro 98.7 5.9E-08 2E-12 94.7 10.6 106 263-409 65-171 (287)
122 2pxx_A Uncharacterized protein 98.7 2.8E-08 9.7E-13 91.8 7.9 111 263-409 43-162 (215)
123 1ve3_A Hypothetical protein PH 98.7 2.7E-08 9.4E-13 93.0 7.8 106 263-408 39-144 (227)
124 1nt2_A Fibrillarin-like PRE-rR 98.7 1.6E-07 5.4E-12 88.7 13.1 137 263-444 58-208 (210)
125 3l8d_A Methyltransferase; stru 98.7 8.4E-08 2.9E-12 90.7 11.2 103 263-409 54-156 (242)
126 2b25_A Hypothetical protein; s 98.7 5.6E-08 1.9E-12 97.8 10.4 117 263-424 106-235 (336)
127 4dmg_A Putative uncharacterize 98.7 1.1E-07 3.9E-12 98.6 13.0 110 263-409 215-329 (393)
128 2fk8_A Methoxy mycolic acid sy 98.7 4.4E-08 1.5E-12 97.2 9.5 106 263-409 91-197 (318)
129 1nkv_A Hypothetical protein YJ 98.7 2.6E-08 8.9E-13 95.1 7.5 103 263-406 37-140 (256)
130 3m4x_A NOL1/NOP2/SUN family pr 98.7 7E-08 2.4E-12 102.1 11.5 133 263-426 106-254 (456)
131 2yqz_A Hypothetical protein TT 98.7 7.6E-08 2.6E-12 92.0 10.7 102 263-406 40-141 (263)
132 3jwg_A HEN1, methyltransferase 98.7 3.7E-08 1.3E-12 92.1 8.3 102 263-405 30-140 (219)
133 3mgg_A Methyltransferase; NYSG 98.7 4.2E-08 1.4E-12 95.1 8.8 104 263-406 38-142 (276)
134 3a27_A TYW2, uncharacterized p 98.7 2.7E-08 9.3E-13 97.7 7.5 119 263-426 120-242 (272)
135 3lcc_A Putative methyl chlorid 98.7 3E-08 1E-12 93.9 7.5 106 263-408 67-173 (235)
136 2qm3_A Predicted methyltransfe 98.7 4E-08 1.4E-12 100.8 8.9 106 263-408 173-280 (373)
137 2pbf_A Protein-L-isoaspartate 98.7 1.9E-08 6.6E-13 94.8 5.9 104 263-408 81-195 (227)
138 3m70_A Tellurite resistance pr 98.6 5.4E-08 1.8E-12 95.0 9.0 103 263-406 121-223 (286)
139 1o54_A SAM-dependent O-methylt 98.6 4.6E-08 1.6E-12 95.6 8.3 114 263-424 113-229 (277)
140 3sm3_A SAM-dependent methyltra 98.6 7E-08 2.4E-12 90.3 9.2 109 263-409 31-144 (235)
141 3d2l_A SAM-dependent methyltra 98.6 4E-08 1.4E-12 92.8 7.6 107 263-409 34-140 (243)
142 1xxl_A YCGJ protein; structura 98.6 1.3E-07 4.4E-12 90.1 11.1 102 263-405 22-123 (239)
143 2frx_A Hypothetical protein YE 98.6 1.8E-07 6.1E-12 99.5 13.2 133 263-426 118-266 (479)
144 1xtp_A LMAJ004091AAA; SGPP, st 98.6 8.8E-08 3E-12 91.2 9.7 104 263-406 94-197 (254)
145 3gu3_A Methyltransferase; alph 98.6 9.2E-08 3.1E-12 93.8 10.0 104 263-408 23-128 (284)
146 1wzn_A SAM-dependent methyltra 98.6 4.9E-08 1.7E-12 93.1 7.9 106 263-408 42-147 (252)
147 3bus_A REBM, methyltransferase 98.6 8.9E-08 3E-12 92.4 9.7 105 263-407 62-167 (273)
148 3v97_A Ribosomal RNA large sub 98.6 1.8E-07 6.2E-12 103.9 13.3 114 263-409 540-660 (703)
149 3ggd_A SAM-dependent methyltra 98.6 1.8E-07 6.3E-12 88.9 11.6 108 263-407 57-164 (245)
150 4hc4_A Protein arginine N-meth 98.6 6.9E-08 2.4E-12 99.7 9.1 103 263-404 84-187 (376)
151 3bkw_A MLL3908 protein, S-aden 98.6 2E-07 6.9E-12 87.9 11.3 102 263-407 44-145 (243)
152 3thr_A Glycine N-methyltransfe 98.6 8.3E-08 2.9E-12 93.7 8.9 114 263-409 58-178 (293)
153 3vc1_A Geranyl diphosphate 2-C 98.6 7.2E-08 2.5E-12 95.8 8.4 104 263-407 118-222 (312)
154 2gs9_A Hypothetical protein TT 98.6 1.8E-07 6.1E-12 86.8 10.6 101 263-412 37-138 (211)
155 3m33_A Uncharacterized protein 98.6 2.7E-08 9.2E-13 94.2 4.9 90 263-403 49-139 (226)
156 2kw5_A SLR1183 protein; struct 98.6 6.2E-08 2.1E-12 89.3 7.2 103 265-409 32-134 (202)
157 3q7e_A Protein arginine N-meth 98.6 1.2E-07 4E-12 96.5 9.9 105 263-405 67-172 (349)
158 3r0q_C Probable protein argini 98.6 1.1E-07 3.8E-12 97.7 9.6 103 263-404 64-167 (376)
159 2yxe_A Protein-L-isoaspartate 98.6 5.9E-08 2E-12 90.5 6.8 102 263-410 78-181 (215)
160 2o57_A Putative sarcosine dime 98.6 8.6E-08 2.9E-12 94.0 8.3 105 263-407 83-188 (297)
161 3g5t_A Trans-aconitate 3-methy 98.6 1.3E-07 4.4E-12 93.2 9.5 107 263-404 37-147 (299)
162 3dou_A Ribosomal RNA large sub 98.6 2.7E-07 9.2E-12 85.9 11.2 129 263-432 26-163 (191)
163 1y8c_A S-adenosylmethionine-de 98.6 5.4E-08 1.9E-12 91.7 6.2 108 263-409 38-145 (246)
164 2fyt_A Protein arginine N-meth 98.6 1.6E-07 5.3E-12 95.3 10.0 103 263-403 65-168 (340)
165 1nv8_A HEMK protein; class I a 98.6 2.4E-07 8.1E-12 91.7 11.0 144 263-445 124-281 (284)
166 1r18_A Protein-L-isoaspartate( 98.6 4.4E-08 1.5E-12 92.7 5.4 101 263-409 85-197 (227)
167 2ipx_A RRNA 2'-O-methyltransfe 98.6 9.1E-08 3.1E-12 90.8 7.6 104 263-407 78-183 (233)
168 1vbf_A 231AA long hypothetical 98.6 1.6E-07 5.5E-12 88.5 9.3 98 263-409 71-168 (231)
169 2p8j_A S-adenosylmethionine-de 98.6 8.9E-08 3E-12 88.5 7.2 108 263-409 24-131 (209)
170 3id6_C Fibrillarin-like rRNA/T 98.5 3.6E-07 1.2E-11 88.3 11.6 138 263-445 77-230 (232)
171 1i1n_A Protein-L-isoaspartate 98.5 5E-08 1.7E-12 91.8 5.3 101 263-409 78-185 (226)
172 1jg1_A PIMT;, protein-L-isoasp 98.5 9.2E-08 3.2E-12 91.0 7.1 101 263-409 92-192 (235)
173 1g6q_1 HnRNP arginine N-methyl 98.5 2.8E-07 9.5E-12 92.9 10.9 104 263-404 39-143 (328)
174 1ri5_A MRNA capping enzyme; me 98.5 9.8E-08 3.3E-12 92.9 7.0 111 263-409 65-177 (298)
175 2y1w_A Histone-arginine methyl 98.5 1.6E-07 5.6E-12 95.4 8.8 104 263-406 51-155 (348)
176 3gdh_A Trimethylguanosine synt 98.5 1.6E-08 5.5E-13 96.2 1.2 102 263-406 79-181 (241)
177 2yx1_A Hypothetical protein MJ 98.5 1.3E-07 4.5E-12 95.7 8.0 111 263-425 196-307 (336)
178 2pjd_A Ribosomal RNA small sub 98.5 2E-07 7E-12 94.3 9.3 132 263-445 197-336 (343)
179 3q87_B N6 adenine specific DNA 98.5 3.8E-07 1.3E-11 82.9 10.1 115 263-428 24-144 (170)
180 1wy7_A Hypothetical protein PH 98.5 1E-06 3.4E-11 81.5 13.2 115 263-423 50-164 (207)
181 1dl5_A Protein-L-isoaspartate 98.5 1.2E-07 4E-12 94.9 7.2 101 263-409 76-178 (317)
182 2vdw_A Vaccinia virus capping 98.5 1.4E-07 4.6E-12 94.4 7.5 116 263-409 49-172 (302)
183 3k6r_A Putative transferase PH 98.5 3.9E-08 1.3E-12 97.6 3.4 99 263-406 126-225 (278)
184 4fsd_A Arsenic methyltransfera 98.5 2.5E-07 8.5E-12 95.1 9.5 110 263-406 84-203 (383)
185 2dul_A N(2),N(2)-dimethylguano 98.5 3.4E-07 1.1E-11 94.6 10.4 101 263-406 48-164 (378)
186 2plw_A Ribosomal RNA methyltra 98.5 7E-07 2.4E-11 82.1 11.3 147 263-432 23-178 (201)
187 3gnl_A Uncharacterized protein 98.5 9E-07 3.1E-11 86.2 12.5 157 263-465 22-183 (244)
188 2qe6_A Uncharacterized protein 98.5 1.2E-06 4.2E-11 86.1 13.6 113 263-409 78-199 (274)
189 1o9g_A RRNA methyltransferase; 98.5 5.1E-08 1.7E-12 93.7 3.5 44 263-306 52-98 (250)
190 2nyu_A Putative ribosomal RNA 98.5 1.2E-06 4.2E-11 80.0 12.6 126 263-432 23-169 (196)
191 1ne2_A Hypothetical protein TA 98.5 1.1E-06 3.6E-11 81.2 11.9 94 263-404 52-145 (200)
192 3bgv_A MRNA CAP guanine-N7 met 98.5 1.2E-07 4.2E-12 94.0 5.9 116 263-409 35-158 (313)
193 2yxl_A PH0851 protein, 450AA l 98.5 4.3E-07 1.5E-11 95.5 10.2 135 263-427 260-410 (450)
194 1sqg_A SUN protein, FMU protei 98.5 8E-07 2.7E-11 92.8 12.1 134 263-427 247-395 (429)
195 2avn_A Ubiquinone/menaquinone 98.5 4.7E-07 1.6E-11 87.3 9.5 101 263-409 55-155 (260)
196 3kr9_A SAM-dependent methyltra 98.4 6.7E-07 2.3E-11 86.1 10.5 155 263-465 16-175 (225)
197 3tma_A Methyltransferase; thum 98.4 7.4E-07 2.5E-11 90.4 11.2 111 263-407 204-318 (354)
198 3gwz_A MMCR; methyltransferase 98.4 7.4E-07 2.5E-11 91.0 11.3 100 262-405 202-306 (369)
199 1p91_A Ribosomal RNA large sub 98.4 2.1E-07 7.1E-12 89.9 6.6 95 263-409 86-181 (269)
200 3cc8_A Putative methyltransfer 98.4 4.2E-07 1.4E-11 84.6 8.2 101 263-409 33-133 (230)
201 3lec_A NADB-rossmann superfami 98.4 1.3E-06 4.5E-11 84.3 11.7 155 263-465 22-181 (230)
202 3i53_A O-methyltransferase; CO 98.4 3.8E-07 1.3E-11 91.4 7.8 100 263-406 170-274 (332)
203 2aot_A HMT, histamine N-methyl 98.4 8.6E-07 2.9E-11 87.1 10.0 115 263-411 53-177 (292)
204 3ege_A Putative methyltransfer 98.4 2.8E-07 9.7E-12 89.0 5.9 97 263-407 35-131 (261)
205 3axs_A Probable N(2),N(2)-dime 98.4 6E-07 2.1E-11 93.2 8.7 101 263-406 53-158 (392)
206 3bzb_A Uncharacterized protein 98.4 2.8E-06 9.7E-11 83.5 13.1 108 263-408 80-207 (281)
207 3sso_A Methyltransferase; macr 98.4 5.3E-07 1.8E-11 93.7 8.0 97 263-405 217-323 (419)
208 2p41_A Type II methyltransfera 98.4 7.6E-07 2.6E-11 89.2 8.6 124 263-431 83-216 (305)
209 4a6d_A Hydroxyindole O-methylt 98.3 1E-06 3.5E-11 89.6 9.0 101 263-404 180-281 (353)
210 3dp7_A SAM-dependent methyltra 98.3 7.9E-07 2.7E-11 90.6 7.9 105 263-405 180-286 (363)
211 3b3j_A Histone-arginine methyl 98.3 4.4E-07 1.5E-11 96.5 6.3 104 263-406 159-263 (480)
212 2oxt_A Nucleoside-2'-O-methylt 98.3 2.3E-07 7.9E-12 91.2 3.7 126 263-432 75-211 (265)
213 2wa2_A Non-structural protein 98.3 3.8E-07 1.3E-11 90.2 5.0 127 263-432 83-219 (276)
214 3mq2_A 16S rRNA methyltransfer 98.3 8.2E-07 2.8E-11 83.0 6.7 107 263-406 28-140 (218)
215 3fzg_A 16S rRNA methylase; met 98.3 6.3E-07 2.2E-11 84.4 5.6 97 263-404 50-150 (200)
216 1u2z_A Histone-lysine N-methyl 98.3 1.3E-06 4.4E-11 91.8 8.3 103 263-405 243-358 (433)
217 4azs_A Methyltransferase WBDD; 98.3 2.2E-06 7.5E-11 92.8 9.9 65 261-326 65-129 (569)
218 2ih2_A Modification methylase 98.2 8.7E-07 3E-11 91.2 6.4 106 263-408 40-166 (421)
219 3iv6_A Putative Zn-dependent a 98.2 2.8E-06 9.6E-11 83.4 9.5 105 263-408 46-150 (261)
220 2i62_A Nicotinamide N-methyltr 98.2 3.5E-07 1.2E-11 87.4 2.8 111 263-406 57-198 (265)
221 2jjq_A Uncharacterized RNA met 98.2 2.4E-06 8.1E-11 89.5 9.3 97 263-406 291-387 (425)
222 3p2e_A 16S rRNA methylase; met 98.2 5E-07 1.7E-11 86.2 3.5 108 263-404 25-137 (225)
223 3uwp_A Histone-lysine N-methyl 98.2 3.8E-06 1.3E-10 87.6 10.1 103 263-405 174-287 (438)
224 2b9e_A NOL1/NOP2/SUN domain fa 98.2 9.4E-06 3.2E-10 81.5 12.6 135 263-427 103-255 (309)
225 2h00_A Methyltransferase 10 do 98.2 4.3E-07 1.5E-11 87.2 2.6 60 263-322 66-127 (254)
226 1x19_A CRTF-related protein; m 98.2 5.1E-06 1.7E-10 84.1 10.4 103 262-405 190-294 (359)
227 1qzz_A RDMB, aclacinomycin-10- 98.2 3.5E-06 1.2E-10 85.4 9.2 102 262-407 182-288 (374)
228 1af7_A Chemotaxis receptor met 98.2 2.6E-06 9E-11 84.2 8.0 105 263-404 106-250 (274)
229 3mcz_A O-methyltransferase; ad 98.2 2.5E-06 8.6E-11 85.8 7.9 102 263-405 180-286 (352)
230 2g72_A Phenylethanolamine N-me 98.2 1.1E-06 3.9E-11 85.9 5.1 44 263-306 72-115 (289)
231 2r3s_A Uncharacterized protein 98.2 9E-06 3.1E-10 80.8 11.7 101 263-406 166-271 (335)
232 1vlm_A SAM-dependent methyltra 98.2 3.8E-06 1.3E-10 78.6 8.5 96 263-410 48-143 (219)
233 1zq9_A Probable dimethyladenos 98.1 5.2E-06 1.8E-10 82.0 9.1 60 263-323 29-89 (285)
234 3bkx_A SAM-dependent methyltra 98.1 4.2E-06 1.4E-10 80.7 8.2 110 263-409 44-162 (275)
235 2ip2_A Probable phenazine-spec 98.1 2.7E-06 9.3E-11 85.0 6.8 101 264-405 169-271 (334)
236 1tw3_A COMT, carminomycin 4-O- 98.1 5.1E-06 1.8E-10 83.8 8.5 100 263-406 184-288 (360)
237 1uwv_A 23S rRNA (uracil-5-)-me 98.1 3.3E-06 1.1E-10 88.3 7.0 102 263-405 287-388 (433)
238 2f8l_A Hypothetical protein LM 98.1 3E-06 1E-10 85.6 6.3 112 263-406 131-256 (344)
239 3bt7_A TRNA (uracil-5-)-methyl 98.1 1.2E-05 4.2E-10 82.2 10.8 63 263-326 214-276 (369)
240 4e2x_A TCAB9; kijanose, tetron 98.1 2.2E-06 7.6E-11 88.4 5.2 102 263-407 108-209 (416)
241 2a14_A Indolethylamine N-methy 98.1 1.1E-06 3.7E-11 85.3 2.6 44 263-306 56-99 (263)
242 3hp7_A Hemolysin, putative; st 98.1 2.3E-06 7.9E-11 85.3 4.7 99 263-405 86-184 (291)
243 3tm4_A TRNA (guanine N2-)-meth 98.0 9.5E-06 3.2E-10 83.2 8.8 106 263-403 218-327 (373)
244 3htx_A HEN1; HEN1, small RNA m 98.0 1.5E-05 5.3E-10 89.1 11.0 102 263-406 722-834 (950)
245 2h1r_A Dimethyladenosine trans 98.0 4.7E-06 1.6E-10 83.0 5.7 60 263-323 43-102 (299)
246 3reo_A (ISO)eugenol O-methyltr 98.0 5.1E-06 1.7E-10 84.9 5.6 95 263-405 204-299 (368)
247 2xyq_A Putative 2'-O-methyl tr 98.0 3.6E-05 1.2E-09 76.7 11.6 132 263-445 64-210 (290)
248 2wk1_A NOVP; transferase, O-me 98.0 9.7E-06 3.3E-10 80.5 7.2 123 262-426 106-263 (282)
249 3gru_A Dimethyladenosine trans 98.0 1.1E-05 3.8E-10 80.5 7.7 58 263-323 51-108 (295)
250 3giw_A Protein of unknown func 98.0 2.8E-05 9.5E-10 77.0 10.3 122 263-410 79-204 (277)
251 2zfu_A Nucleomethylin, cerebra 98.0 2.7E-05 9.2E-10 72.3 9.5 123 263-446 68-191 (215)
252 3ll7_A Putative methyltransfer 97.9 1.7E-05 5.8E-10 82.7 8.9 145 263-444 94-244 (410)
253 3fut_A Dimethyladenosine trans 97.9 2E-05 6.7E-10 77.8 8.8 55 265-323 49-103 (271)
254 1fp1_D Isoliquiritigenin 2'-O- 97.9 8.5E-06 2.9E-10 83.0 6.2 92 263-405 210-305 (372)
255 3lst_A CALO1 methyltransferase 97.9 1.1E-05 3.7E-10 81.5 6.8 97 263-406 185-286 (348)
256 3opn_A Putative hemolysin; str 97.9 6.1E-06 2.1E-10 79.3 4.5 100 263-406 38-137 (232)
257 3p9c_A Caffeic acid O-methyltr 97.9 8.2E-06 2.8E-10 83.2 5.4 95 263-405 202-297 (364)
258 4fzv_A Putative methyltransfer 97.9 4.8E-05 1.7E-09 77.9 10.8 131 263-422 149-300 (359)
259 3vyw_A MNMC2; tRNA wobble urid 97.8 0.00016 5.4E-09 72.6 13.3 144 263-448 97-262 (308)
260 1fp2_A Isoflavone O-methyltran 97.8 1.8E-05 6.2E-10 79.9 6.4 93 263-406 189-288 (352)
261 1qam_A ERMC' methyltransferase 97.8 6.2E-05 2.1E-09 72.5 9.7 58 263-323 31-88 (244)
262 1m6y_A S-adenosyl-methyltransf 97.8 6.8E-05 2.3E-09 75.0 9.3 60 263-323 27-87 (301)
263 2r6z_A UPF0341 protein in RSP 97.7 1.1E-05 3.9E-10 78.7 3.1 64 263-327 84-155 (258)
264 2okc_A Type I restriction enzy 97.7 2.2E-05 7.6E-10 82.2 4.6 112 263-406 172-307 (445)
265 4gqb_A Protein arginine N-meth 97.7 2.9E-05 1E-09 85.0 5.7 124 237-403 335-464 (637)
266 3frh_A 16S rRNA methylase; met 97.7 0.00019 6.5E-09 69.8 10.4 102 262-407 105-206 (253)
267 2oo3_A Protein involved in cat 97.6 0.0002 6.8E-09 70.9 10.5 161 264-467 93-264 (283)
268 3tqs_A Ribosomal RNA small sub 97.6 4.8E-05 1.7E-09 74.2 5.6 58 263-323 30-87 (255)
269 2oyr_A UPF0341 protein YHIQ; a 97.6 2.5E-05 8.6E-10 76.5 2.7 62 264-326 90-160 (258)
270 3ua3_A Protein arginine N-meth 97.5 0.00017 5.8E-09 79.5 9.0 128 237-403 390-531 (745)
271 2ar0_A M.ecoki, type I restric 97.5 0.00017 5.8E-09 77.7 8.4 114 263-406 170-312 (541)
272 3ftd_A Dimethyladenosine trans 97.5 7.3E-05 2.5E-09 72.6 5.0 57 263-323 32-88 (249)
273 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00011 3.9E-09 74.2 6.1 95 263-405 194-292 (358)
274 2ld4_A Anamorsin; methyltransf 97.5 9.2E-05 3.1E-09 66.6 4.7 88 263-405 13-100 (176)
275 3lcv_B Sisomicin-gentamicin re 97.4 9E-05 3.1E-09 72.9 4.8 101 262-408 132-237 (281)
276 3ldg_A Putative uncharacterize 97.4 0.00035 1.2E-08 72.1 9.1 112 263-413 195-348 (384)
277 3k0b_A Predicted N6-adenine-sp 97.4 0.00043 1.5E-08 71.6 9.7 61 263-323 202-302 (393)
278 3uzu_A Ribosomal RNA small sub 97.4 9.8E-05 3.3E-09 73.0 3.9 57 263-323 43-102 (279)
279 3ldu_A Putative methylase; str 97.3 0.00033 1.1E-08 72.3 7.9 61 263-323 196-296 (385)
280 1qyr_A KSGA, high level kasuga 97.3 0.00016 5.3E-09 70.4 5.0 58 263-323 22-79 (252)
281 1wg8_A Predicted S-adenosylmet 97.3 0.00078 2.7E-08 66.7 10.0 76 263-368 23-98 (285)
282 3ps9_A TRNA 5-methylaminomethy 97.1 0.00085 2.9E-08 73.6 7.8 112 263-406 67-219 (676)
283 3evf_A RNA-directed RNA polyme 97.0 0.0016 5.5E-08 64.2 8.3 131 264-433 76-211 (277)
284 3s1s_A Restriction endonucleas 97.0 0.0028 9.5E-08 71.0 10.9 116 263-408 322-467 (878)
285 3lkd_A Type I restriction-modi 97.0 0.0034 1.2E-07 67.6 11.4 117 263-407 222-359 (542)
286 1yub_A Ermam, rRNA methyltrans 97.0 0.00014 4.9E-09 69.6 0.5 58 263-323 30-87 (245)
287 3pvc_A TRNA 5-methylaminomethy 96.8 0.0022 7.7E-08 70.5 8.8 112 263-406 59-211 (689)
288 3khk_A Type I restriction-modi 96.7 0.0015 5.1E-08 70.4 6.0 115 264-407 246-396 (544)
289 3eld_A Methyltransferase; flav 96.6 0.0019 6.6E-08 64.2 5.1 135 263-433 82-218 (300)
290 3gcz_A Polyprotein; flavivirus 96.5 0.0013 4.5E-08 64.9 3.5 134 264-433 92-228 (282)
291 1i4w_A Mitochondrial replicati 96.5 0.0025 8.5E-08 65.1 5.7 58 263-323 59-117 (353)
292 3tka_A Ribosomal RNA small sub 95.8 0.027 9.2E-07 57.1 9.2 79 263-369 58-138 (347)
293 3v97_A Ribosomal RNA large sub 95.8 0.019 6.6E-07 63.5 8.8 61 263-323 191-295 (703)
294 3tos_A CALS11; methyltransfera 95.5 0.077 2.6E-06 51.7 10.7 125 262-426 69-235 (257)
295 3m6i_A L-arabinitol 4-dehydrog 95.4 0.15 5.1E-06 51.1 13.0 95 263-404 180-281 (363)
296 3r24_A NSP16, 2'-O-methyl tran 95.3 0.044 1.5E-06 54.5 8.2 120 263-432 110-240 (344)
297 3s2e_A Zinc-containing alcohol 95.1 0.051 1.7E-06 54.1 8.2 95 263-405 167-262 (340)
298 2k4m_A TR8_protein, UPF0146 pr 95.0 0.013 4.5E-07 52.6 3.2 37 263-299 36-73 (153)
299 3lkz_A Non-structural protein 95.0 0.063 2.2E-06 53.4 8.3 142 264-447 96-247 (321)
300 1pl8_A Human sorbitol dehydrog 94.8 0.34 1.1E-05 48.5 13.4 95 263-404 172-271 (356)
301 1f8f_A Benzyl alcohol dehydrog 94.7 0.082 2.8E-06 53.2 8.9 92 263-404 191-287 (371)
302 2px2_A Genome polyprotein [con 94.7 0.042 1.4E-06 53.6 6.1 128 263-431 74-208 (269)
303 3ggo_A Prephenate dehydrogenas 94.5 0.19 6.5E-06 49.9 10.7 103 264-419 34-140 (314)
304 4eez_A Alcohol dehydrogenase 1 94.4 0.23 7.8E-06 49.2 11.2 98 263-406 164-263 (348)
305 2dph_A Formaldehyde dismutase; 94.4 0.077 2.6E-06 54.1 7.8 107 263-404 186-297 (398)
306 3p8z_A Mtase, non-structural p 94.4 0.089 3.1E-06 50.8 7.6 141 264-447 80-229 (267)
307 3fwz_A Inner membrane protein 94.3 0.18 6.1E-06 43.5 8.9 52 263-322 7-60 (140)
308 4auk_A Ribosomal RNA large sub 94.3 0.14 4.8E-06 52.5 9.3 53 263-323 212-264 (375)
309 2dpo_A L-gulonate 3-dehydrogen 94.2 0.28 9.7E-06 48.9 11.3 100 263-409 6-126 (319)
310 3fpc_A NADP-dependent alcohol 94.1 0.11 3.8E-06 51.8 8.2 96 263-404 167-264 (352)
311 1pqw_A Polyketide synthase; ro 94.1 0.14 4.7E-06 46.5 8.1 95 263-404 39-135 (198)
312 2h6e_A ADH-4, D-arabinose 1-de 94.1 0.28 9.6E-06 48.7 11.0 93 263-404 171-267 (344)
313 1g60_A Adenine-specific methyl 93.6 0.17 5.8E-06 48.7 8.0 63 312-406 4-74 (260)
314 1e3j_A NADP(H)-dependent ketos 93.6 0.34 1.2E-05 48.2 10.6 97 263-404 169-269 (352)
315 4e21_A 6-phosphogluconate dehy 93.5 0.79 2.7E-05 46.4 13.3 108 263-423 22-131 (358)
316 3uog_A Alcohol dehydrogenase; 93.5 0.53 1.8E-05 47.2 11.9 93 263-405 190-286 (363)
317 2efj_A 3,7-dimethylxanthine me 93.4 0.19 6.5E-06 51.7 8.5 26 387-412 206-231 (384)
318 1p0f_A NADP-dependent alcohol 93.4 0.88 3E-05 45.6 13.3 92 263-404 192-291 (373)
319 1cdo_A Alcohol dehydrogenase; 93.4 0.88 3E-05 45.6 13.3 92 263-404 193-292 (374)
320 1eg2_A Modification methylase 93.3 0.2 6.8E-06 50.1 8.3 71 310-409 36-109 (319)
321 2jhf_A Alcohol dehydrogenase E 93.3 1.1 3.8E-05 44.9 13.9 92 263-404 192-291 (374)
322 3uko_A Alcohol dehydrogenase c 93.2 0.34 1.2E-05 48.9 10.0 95 263-404 194-293 (378)
323 2fzw_A Alcohol dehydrogenase c 93.2 1 3.5E-05 45.1 13.4 92 263-404 191-290 (373)
324 1uuf_A YAHK, zinc-type alcohol 93.2 0.36 1.2E-05 48.7 10.1 44 263-307 195-239 (369)
325 3jv7_A ADH-A; dehydrogenase, n 93.2 0.42 1.5E-05 47.4 10.4 95 263-404 172-268 (345)
326 1kol_A Formaldehyde dehydrogen 93.2 0.35 1.2E-05 49.0 10.0 107 263-404 186-298 (398)
327 3gg2_A Sugar dehydrogenase, UD 93.1 0.88 3E-05 47.5 13.3 39 264-303 3-43 (450)
328 3qwb_A Probable quinone oxidor 93.1 0.26 8.8E-06 48.7 8.8 95 263-404 149-245 (334)
329 4ej6_A Putative zinc-binding d 93.0 0.19 6.4E-06 50.8 7.7 98 263-404 183-282 (370)
330 4e12_A Diketoreductase; oxidor 93.0 0.54 1.8E-05 45.6 10.7 41 263-304 4-46 (283)
331 1e3i_A Alcohol dehydrogenase, 92.9 1.1 3.7E-05 45.0 13.2 92 263-404 196-295 (376)
332 1boo_A Protein (N-4 cytosine-s 92.9 0.12 4.1E-06 51.6 5.9 72 310-409 12-87 (323)
333 1lss_A TRK system potassium up 92.8 1.7 5.7E-05 36.3 12.3 51 264-321 5-57 (140)
334 3gt0_A Pyrroline-5-carboxylate 92.6 0.52 1.8E-05 44.6 9.7 93 264-410 3-101 (247)
335 4b7c_A Probable oxidoreductase 92.5 0.32 1.1E-05 48.0 8.5 95 263-404 150-246 (336)
336 1rjw_A ADH-HT, alcohol dehydro 92.4 0.29 1E-05 48.6 8.0 94 263-404 165-259 (339)
337 2o3j_A UDP-glucose 6-dehydroge 92.3 2.4 8.1E-05 44.5 15.2 41 263-303 9-52 (481)
338 2y0c_A BCEC, UDP-glucose dehyd 92.2 1.8 6.1E-05 45.5 14.2 41 263-304 8-50 (478)
339 2d8a_A PH0655, probable L-thre 92.2 0.31 1.1E-05 48.5 8.0 96 263-404 168-265 (348)
340 1pjc_A Protein (L-alanine dehy 92.2 1.3 4.4E-05 44.7 12.6 44 263-306 167-211 (361)
341 3jyn_A Quinone oxidoreductase; 92.1 0.32 1.1E-05 47.9 7.9 95 263-404 141-237 (325)
342 2h78_A Hibadh, 3-hydroxyisobut 92.1 0.62 2.1E-05 45.2 9.8 41 263-304 3-45 (302)
343 3ip1_A Alcohol dehydrogenase, 92.1 0.44 1.5E-05 48.5 9.1 42 263-304 214-257 (404)
344 2vhw_A Alanine dehydrogenase; 92.0 1.7 5.9E-05 44.1 13.3 45 263-307 168-213 (377)
345 4eye_A Probable oxidoreductase 92.0 0.32 1.1E-05 48.4 7.7 94 263-404 160-255 (342)
346 1f0y_A HCDH, L-3-hydroxyacyl-C 91.9 0.68 2.3E-05 45.1 9.8 40 263-303 15-56 (302)
347 3llv_A Exopolyphosphatase-rela 91.9 0.65 2.2E-05 39.5 8.6 52 263-322 6-59 (141)
348 3gms_A Putative NADPH:quinone 91.8 0.35 1.2E-05 48.0 7.7 42 263-304 145-188 (340)
349 1zcj_A Peroxisomal bifunctiona 91.6 0.7 2.4E-05 48.4 10.2 100 263-410 37-154 (463)
350 3l9w_A Glutathione-regulated p 91.6 0.32 1.1E-05 50.3 7.5 56 263-326 4-63 (413)
351 3k96_A Glycerol-3-phosphate de 91.5 0.86 2.9E-05 46.1 10.4 114 263-426 29-152 (356)
352 2zig_A TTHA0409, putative modi 91.4 0.15 5E-06 50.1 4.4 69 311-408 20-99 (297)
353 3pef_A 6-phosphogluconate dehy 91.4 1.1 3.8E-05 43.2 10.7 105 264-423 2-111 (287)
354 3ktd_A Prephenate dehydrogenas 91.4 0.54 1.8E-05 47.4 8.7 100 263-415 8-109 (341)
355 3c85_A Putative glutathione-re 91.1 1 3.5E-05 40.2 9.5 52 263-321 39-92 (183)
356 1qor_A Quinone oxidoreductase; 91.1 0.45 1.5E-05 46.7 7.6 93 263-404 141-237 (327)
357 3two_A Mannitol dehydrogenase; 91.1 0.48 1.6E-05 47.1 7.9 44 263-307 177-221 (348)
358 1g55_A DNA cytosine methyltran 91.0 0.46 1.6E-05 47.7 7.8 127 263-423 2-138 (343)
359 3ufb_A Type I restriction-modi 91.0 0.45 1.5E-05 50.8 8.0 119 263-407 218-363 (530)
360 3gaz_A Alcohol dehydrogenase s 91.0 0.68 2.3E-05 46.0 8.9 92 263-404 151-244 (343)
361 1wly_A CAAR, 2-haloacrylate re 90.9 0.63 2.2E-05 45.9 8.6 95 263-404 146-242 (333)
362 3l4b_C TRKA K+ channel protien 90.9 1.5 5E-05 40.4 10.6 51 265-322 2-54 (218)
363 3b1f_A Putative prephenate deh 90.9 0.72 2.5E-05 44.4 8.8 41 263-303 6-49 (290)
364 3qsg_A NAD-binding phosphogluc 90.9 5 0.00017 39.2 15.1 109 263-427 24-137 (312)
365 2g5c_A Prephenate dehydrogenas 90.8 0.9 3.1E-05 43.5 9.3 41 264-304 2-45 (281)
366 1vj0_A Alcohol dehydrogenase, 90.8 2.3 8E-05 42.7 12.8 96 263-404 196-296 (380)
367 1v3u_A Leukotriene B4 12- hydr 90.8 0.85 2.9E-05 44.8 9.3 92 263-404 146-242 (333)
368 1mv8_A GMD, GDP-mannose 6-dehy 90.7 3.2 0.00011 42.8 14.1 38 265-303 2-41 (436)
369 1bg6_A N-(1-D-carboxylethyl)-L 90.7 0.91 3.1E-05 44.8 9.5 43 263-306 4-48 (359)
370 2dq4_A L-threonine 3-dehydroge 90.7 0.23 7.9E-06 49.3 5.1 94 263-404 165-260 (343)
371 1vpd_A Tartronate semialdehyde 90.6 1.9 6.5E-05 41.4 11.6 40 264-304 6-47 (299)
372 4a2c_A Galactitol-1-phosphate 90.6 1.2 4.3E-05 43.7 10.5 97 263-405 161-259 (346)
373 3g0o_A 3-hydroxyisobutyrate de 90.6 0.34 1.2E-05 47.4 6.2 41 263-304 7-49 (303)
374 1id1_A Putative potassium chan 90.6 1.6 5.4E-05 37.8 10.0 55 263-322 3-60 (153)
375 2eih_A Alcohol dehydrogenase; 90.4 0.93 3.2E-05 44.9 9.3 43 263-306 167-211 (343)
376 4dio_A NAD(P) transhydrogenase 90.3 1.5 5.1E-05 45.3 11.0 43 263-306 190-233 (405)
377 1yb5_A Quinone oxidoreductase; 90.3 1.1 3.7E-05 44.7 9.8 95 263-404 171-267 (351)
378 3doj_A AT3G25530, dehydrogenas 90.3 1.4 4.8E-05 43.2 10.4 106 263-423 21-131 (310)
379 1dlj_A UDP-glucose dehydrogena 90.2 0.9 3.1E-05 46.5 9.2 37 265-303 2-40 (402)
380 2b5w_A Glucose dehydrogenase; 90.2 0.41 1.4E-05 47.8 6.5 91 264-404 174-271 (357)
381 2j3h_A NADP-dependent oxidored 90.1 0.73 2.5E-05 45.5 8.2 93 263-404 156-253 (345)
382 1yqd_A Sinapyl alcohol dehydro 90.0 1.4 4.8E-05 44.1 10.4 45 263-307 188-233 (366)
383 4dll_A 2-hydroxy-3-oxopropiona 90.0 1.8 6.1E-05 42.7 10.9 106 263-423 31-140 (320)
384 2zig_A TTHA0409, putative modi 89.9 0.28 9.7E-06 48.0 4.9 43 263-306 236-278 (297)
385 1pgj_A 6PGDH, 6-PGDH, 6-phosph 89.9 3.1 0.00011 43.6 13.2 101 265-410 3-106 (478)
386 4dup_A Quinone oxidoreductase; 89.9 0.45 1.5E-05 47.5 6.5 94 263-404 168-263 (353)
387 4dvj_A Putative zinc-dependent 89.9 0.97 3.3E-05 45.3 9.0 92 263-404 172-268 (363)
388 2zb4_A Prostaglandin reductase 89.8 0.9 3.1E-05 45.2 8.7 92 264-404 162-258 (357)
389 2hcy_A Alcohol dehydrogenase 1 89.8 0.97 3.3E-05 44.8 8.8 93 263-404 170-267 (347)
390 3fbg_A Putative arginate lyase 89.8 1 3.4E-05 44.7 8.9 92 263-404 151-246 (346)
391 3mog_A Probable 3-hydroxybutyr 89.5 0.68 2.3E-05 48.9 7.8 113 263-411 5-125 (483)
392 2zyd_A 6-phosphogluconate dehy 89.4 3.8 0.00013 43.0 13.5 113 263-423 15-129 (480)
393 3p2y_A Alanine dehydrogenase/p 89.4 0.67 2.3E-05 47.6 7.4 43 263-306 184-227 (381)
394 3tri_A Pyrroline-5-carboxylate 89.4 2.2 7.4E-05 41.3 10.8 95 263-410 3-102 (280)
395 3cky_A 2-hydroxymethyl glutara 89.3 2.9 9.8E-05 40.2 11.7 40 263-303 4-45 (301)
396 2c0c_A Zinc binding alcohol de 89.2 0.81 2.8E-05 45.8 7.8 91 263-404 164-259 (362)
397 3g7u_A Cytosine-specific methy 89.2 2.2 7.5E-05 43.5 11.1 117 264-409 3-123 (376)
398 1piw_A Hypothetical zinc-type 89.1 0.55 1.9E-05 46.9 6.5 44 263-307 180-224 (360)
399 2eez_A Alanine dehydrogenase; 89.1 3.1 0.00011 41.9 12.1 44 263-306 166-210 (369)
400 1x13_A NAD(P) transhydrogenase 89.0 1.8 6.3E-05 44.4 10.4 43 263-306 172-215 (401)
401 3pdu_A 3-hydroxyisobutyrate de 89.0 1.5 5E-05 42.3 9.2 105 264-423 2-111 (287)
402 3dtt_A NADP oxidoreductase; st 88.9 1.8 6.1E-05 40.9 9.6 34 263-297 19-54 (245)
403 2hwk_A Helicase NSP2; rossman 88.9 1.2 4.1E-05 44.0 8.3 74 357-433 204-281 (320)
404 2c7p_A Modification methylase 88.7 1.9 6.6E-05 43.0 10.1 123 263-424 11-143 (327)
405 1jvb_A NAD(H)-dependent alcoho 88.7 0.84 2.9E-05 45.3 7.4 94 263-404 171-269 (347)
406 3hwr_A 2-dehydropantoate 2-red 88.6 1.6 5.6E-05 42.9 9.5 108 263-426 19-134 (318)
407 4g65_A TRK system potassium up 88.6 0.64 2.2E-05 48.7 6.8 57 263-326 3-63 (461)
408 2cf5_A Atccad5, CAD, cinnamyl 88.6 1.3 4.4E-05 44.2 8.8 45 263-307 181-226 (357)
409 4a7p_A UDP-glucose dehydrogena 88.4 2.8 9.4E-05 43.8 11.4 137 263-426 8-148 (446)
410 2f1k_A Prephenate dehydrogenas 88.4 1.4 4.8E-05 42.0 8.6 92 265-411 2-95 (279)
411 3b5i_A S-adenosyl-L-methionine 88.4 0.66 2.2E-05 47.5 6.5 24 387-410 206-229 (374)
412 2w2k_A D-mandelate dehydrogena 88.2 1.6 5.6E-05 43.8 9.3 41 263-303 163-205 (348)
413 1l7d_A Nicotinamide nucleotide 88.1 1.6 5.6E-05 44.2 9.3 43 263-306 172-215 (384)
414 3l6d_A Putative oxidoreductase 88.0 3.6 0.00012 40.1 11.4 105 263-423 9-117 (306)
415 2g1u_A Hypothetical protein TM 87.8 1.3 4.3E-05 38.6 7.2 52 263-321 19-72 (155)
416 3qha_A Putative oxidoreductase 87.6 1.3 4.3E-05 43.2 7.8 104 264-423 16-121 (296)
417 2q3e_A UDP-glucose 6-dehydroge 87.3 10 0.00034 39.4 15.0 39 264-302 6-47 (467)
418 2iz1_A 6-phosphogluconate dehy 87.2 3.9 0.00013 42.8 11.7 99 264-410 6-106 (474)
419 2j8z_A Quinone oxidoreductase; 87.0 1.1 3.8E-05 44.6 7.2 42 263-304 163-206 (354)
420 3pid_A UDP-glucose 6-dehydroge 86.8 3.3 0.00011 43.1 10.8 39 263-303 36-76 (432)
421 4gwg_A 6-phosphogluconate dehy 86.4 4.4 0.00015 42.7 11.7 114 263-423 4-119 (484)
422 2p4q_A 6-phosphogluconate dehy 86.3 5.1 0.00017 42.3 12.1 113 263-423 10-125 (497)
423 3rc1_A Sugar 3-ketoreductase; 86.3 5.6 0.00019 39.5 11.9 55 263-324 27-85 (350)
424 2pv7_A T-protein [includes: ch 86.1 2.8 9.5E-05 40.8 9.4 32 264-296 22-56 (298)
425 2cvz_A Dehydrogenase, 3-hydrox 86.0 1.4 4.8E-05 42.0 7.1 39 264-304 2-42 (289)
426 2dbq_A Glyoxylate reductase; D 85.9 3.1 0.00011 41.5 9.7 40 263-304 150-191 (334)
427 3gqv_A Enoyl reductase; medium 85.7 3 0.0001 41.8 9.6 94 263-404 165-261 (371)
428 1iz0_A Quinone oxidoreductase; 85.7 3.2 0.00011 40.1 9.5 43 263-306 126-170 (302)
429 2gcg_A Glyoxylate reductase/hy 85.3 2.7 9.2E-05 41.8 9.0 39 263-302 155-195 (330)
430 1zej_A HBD-9, 3-hydroxyacyl-CO 85.1 1.7 5.7E-05 42.9 7.2 40 263-304 12-53 (293)
431 2rir_A Dipicolinate synthase, 85.1 8.3 0.00029 37.4 12.3 40 263-303 157-198 (300)
432 2gf2_A Hibadh, 3-hydroxyisobut 85.1 4.3 0.00015 38.8 10.1 38 265-303 2-41 (296)
433 3d1l_A Putative NADP oxidoredu 85.0 0.94 3.2E-05 43.0 5.2 42 264-306 11-55 (266)
434 1wcv_1 SOJ, segregation protei 84.9 8 0.00027 36.3 11.7 44 263-308 6-56 (257)
435 4ezb_A Uncharacterized conserv 84.8 3.6 0.00012 40.5 9.5 31 264-295 25-58 (317)
436 1np3_A Ketol-acid reductoisome 84.7 2 6.7E-05 42.9 7.6 41 263-304 16-59 (338)
437 2cdc_A Glucose dehydrogenase g 84.6 2.3 7.9E-05 42.4 8.2 42 263-304 181-226 (366)
438 1txg_A Glycerol-3-phosphate de 84.6 4.7 0.00016 39.2 10.2 39 265-304 2-44 (335)
439 4e7p_A Response regulator; DNA 84.3 9.7 0.00033 31.8 11.0 72 286-396 21-92 (150)
440 3c24_A Putative oxidoreductase 84.3 1 3.6E-05 43.3 5.3 39 264-303 12-53 (286)
441 2d0i_A Dehydrogenase; structur 84.3 13 0.00045 36.8 13.5 149 263-470 146-311 (333)
442 1wwk_A Phosphoglycerate dehydr 84.0 5.5 0.00019 39.2 10.4 39 263-303 142-182 (307)
443 3d4o_A Dipicolinate synthase s 84.0 10 0.00035 36.6 12.3 40 263-303 155-196 (293)
444 3cea_A MYO-inositol 2-dehydrog 83.9 7.8 0.00027 37.9 11.6 45 263-307 8-56 (346)
445 1x0v_A GPD-C, GPDH-C, glycerol 83.8 4.1 0.00014 40.1 9.5 39 264-303 9-61 (354)
446 3i83_A 2-dehydropantoate 2-red 83.6 4.2 0.00014 39.8 9.4 31 264-295 3-35 (320)
447 3nx4_A Putative oxidoreductase 83.5 1.1 3.8E-05 43.8 5.1 41 265-306 149-191 (324)
448 3c7a_A Octopine dehydrogenase; 83.4 1.5 5.2E-05 44.4 6.2 40 264-303 3-47 (404)
449 1evy_A Glycerol-3-phosphate de 83.2 1.3 4.6E-05 44.1 5.7 39 265-304 17-57 (366)
450 2ew2_A 2-dehydropantoate 2-red 83.1 5.8 0.0002 37.9 10.0 40 264-304 4-45 (316)
451 4a0s_A Octenoyl-COA reductase/ 82.9 5.7 0.0002 40.6 10.5 44 263-307 221-266 (447)
452 2uyy_A N-PAC protein; long-cha 82.5 5.9 0.0002 38.4 9.9 40 263-303 30-71 (316)
453 2izz_A Pyrroline-5-carboxylate 82.4 11 0.00037 37.0 11.9 108 263-427 22-136 (322)
454 2wtb_A MFP2, fatty acid multif 82.2 3.3 0.00011 45.9 8.8 40 264-304 313-354 (725)
455 2qyt_A 2-dehydropantoate 2-red 82.0 1.2 4.1E-05 43.1 4.7 40 263-303 8-54 (317)
456 3k6j_A Protein F01G10.3, confi 81.9 6.6 0.00023 41.1 10.5 33 263-296 54-88 (460)
457 3vtf_A UDP-glucose 6-dehydroge 81.8 7 0.00024 40.8 10.6 40 263-303 21-62 (444)
458 3qv2_A 5-cytosine DNA methyltr 81.8 3.7 0.00013 41.0 8.2 55 263-323 10-67 (327)
459 3ic5_A Putative saccharopine d 81.6 5 0.00017 32.1 7.7 51 263-321 5-58 (118)
460 3t8y_A CHEB, chemotaxis respon 81.5 2.9 0.0001 36.0 6.6 93 272-404 10-104 (164)
461 2pgd_A 6-phosphogluconate dehy 81.0 17 0.00058 37.9 13.4 99 264-410 3-104 (482)
462 3krt_A Crotonyl COA reductase; 81.0 8 0.00027 39.8 10.8 44 263-307 229-274 (456)
463 1gdh_A D-glycerate dehydrogena 80.8 8.6 0.00029 38.0 10.5 34 263-297 146-182 (320)
464 2ekl_A D-3-phosphoglycerate de 80.8 7.4 0.00025 38.4 10.0 105 263-423 142-248 (313)
465 4h0n_A DNMT2; SAH binding, tra 80.4 7.9 0.00027 38.6 10.1 128 263-423 3-138 (333)
466 4hkt_A Inositol 2-dehydrogenas 80.2 9.9 0.00034 37.1 10.7 54 263-324 3-59 (331)
467 3obb_A Probable 3-hydroxyisobu 80.2 4.9 0.00017 39.4 8.4 42 262-304 2-45 (300)
468 1dz3_A Stage 0 sporulation pro 80.0 8.3 0.00028 31.2 8.6 74 286-400 3-78 (130)
469 1yb4_A Tartronic semialdehyde 79.9 3 0.0001 39.9 6.6 39 263-303 3-43 (295)
470 3hn2_A 2-dehydropantoate 2-red 79.7 6 0.0002 38.6 8.9 31 264-295 3-35 (312)
471 3db2_A Putative NADPH-dependen 79.1 13 0.00044 36.7 11.3 55 263-324 5-62 (354)
472 3gvx_A Glycerate dehydrogenase 79.0 4.6 0.00016 39.6 7.7 150 263-473 122-286 (290)
473 3cu5_A Two component transcrip 78.9 14 0.00046 30.6 9.8 72 286-396 3-75 (141)
474 1xa0_A Putative NADPH dependen 78.7 2.2 7.7E-05 41.7 5.4 42 265-307 152-195 (328)
475 1rjd_A PPM1P, carboxy methyl t 78.7 7.6 0.00026 38.7 9.4 128 263-423 98-253 (334)
476 3ec7_A Putative dehydrogenase; 78.5 7.7 0.00026 38.6 9.4 57 263-324 23-83 (357)
477 3evn_A Oxidoreductase, GFO/IDH 78.1 9.1 0.00031 37.4 9.7 56 263-324 5-63 (329)
478 3jtm_A Formate dehydrogenase, 78.0 9.6 0.00033 38.4 10.0 107 263-423 164-272 (351)
479 3cz5_A Two-component response 78.0 11 0.00037 31.6 9.0 78 286-404 6-85 (153)
480 1m6e_X S-adenosyl-L-methionnin 77.9 1.2 4.2E-05 45.2 3.3 24 386-409 189-212 (359)
481 2g76_A 3-PGDH, D-3-phosphoglyc 77.9 6.8 0.00023 39.2 8.7 34 263-297 165-200 (335)
482 3tqh_A Quinone oxidoreductase; 77.8 7.4 0.00025 37.8 8.9 43 263-307 153-197 (321)
483 1i36_A Conserved hypothetical 77.7 11 0.00038 35.3 9.8 39 265-304 2-44 (264)
484 4dzz_A Plasmid partitioning pr 77.7 19 0.00065 31.8 11.0 33 285-320 30-62 (206)
485 4e5n_A Thermostable phosphite 77.7 10 0.00035 37.7 9.9 106 263-423 145-252 (330)
486 2pi1_A D-lactate dehydrogenase 77.4 16 0.00055 36.4 11.3 35 263-298 141-177 (334)
487 3ilh_A Two component response 77.4 15 0.00051 30.0 9.6 76 286-395 10-85 (146)
488 3kht_A Response regulator; PSI 77.3 13 0.00045 30.5 9.3 71 285-394 5-75 (144)
489 3guy_A Short-chain dehydrogena 77.3 17 0.00059 33.0 10.9 54 264-322 2-58 (230)
490 3eod_A Protein HNR; response r 77.2 16 0.00053 29.4 9.5 78 285-403 7-84 (130)
491 3ezy_A Dehydrogenase; structur 77.1 12 0.0004 36.8 10.2 55 264-324 3-60 (344)
492 1wdk_A Fatty oxidation complex 77.1 6.7 0.00023 43.3 9.1 41 263-304 314-356 (715)
493 2rcy_A Pyrroline carboxylate r 77.0 8.6 0.00029 35.9 8.8 87 264-411 5-96 (262)
494 3mz0_A Inositol 2-dehydrogenas 76.8 8.4 0.00029 37.9 9.0 56 264-324 3-62 (344)
495 4g65_A TRK system potassium up 76.7 5.2 0.00018 41.7 7.8 57 263-326 235-295 (461)
496 2yq5_A D-isomer specific 2-hyd 76.6 10 0.00036 38.0 9.7 104 263-424 148-253 (343)
497 3kkj_A Amine oxidase, flavin-c 76.5 2 6.7E-05 38.1 3.9 33 264-296 3-36 (336)
498 3kcn_A Adenylate cyclase homol 76.5 18 0.0006 30.2 9.9 72 285-397 4-75 (151)
499 1jay_A Coenzyme F420H2:NADP+ o 76.5 4.4 0.00015 36.7 6.4 38 265-303 2-42 (212)
500 2ahr_A Putative pyrroline carb 76.2 14 0.00047 34.6 10.0 44 263-307 3-48 (259)
No 1
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.97 E-value=3.3e-31 Score=265.22 Aligned_cols=209 Identities=19% Similarity=0.189 Sum_probs=168.7
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+++.++|++++|+||...|+|. ..|+|+++++ +.+|+. .+ |
T Consensus 25 ~~v~~vl~~~~S~yQ~i~v~~s------------~~~G~~L~LD--g~~q~t-----------------e~-----D--- 65 (294)
T 3o4f_A 25 FAVDNVLYHEKTDHQDLIIFEN------------AAFGRVMALD--GVVQTT-----------------ER-----D--- 65 (294)
T ss_dssp EEESEEEEEEC---CCEEEEEE------------TTTEEEEEET--TEEEEE-----------------TT-----T---
T ss_pred EEEeeEEEeccCCCceEEEEEc------------CCcceEEEEC--Cchhhc-----------------cc-----c---
Confidence 5677999999999999999983 1367777774 899975 11 2
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcC-----CC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFG-----LE 308 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg-----~~ 308 (478)
++.||++|++..++.++ +|++|||||+|+|++++++.++++ .+|++|||||+|+++|++||. ..
T Consensus 66 -e~~YhE~l~h~~l~~~p---------~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~ 135 (294)
T 3o4f_A 66 -EFIYHEMMTHVPLLAHG---------HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSY 135 (294)
T ss_dssp -HHHHHHHHHHHHHHHSS---------CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG
T ss_pred -HHHHHHHHHHHHHhhCC---------CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcccccccc
Confidence 68999999998776654 389999999999999999999975 699999999999999999984 23
Q ss_pred CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHH
Q 038592 309 DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDV 388 (478)
Q Consensus 309 ~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~ef 388 (478)
.|||++++++||++||++ ..++||+||+|++++.. |+..|++.+|
T Consensus 136 ~dpRv~v~~~Dg~~~l~~-----------------------------~~~~yDvIi~D~~dp~~------~~~~L~t~eF 180 (294)
T 3o4f_A 136 DDPRFKLVIDDGVNFVNQ-----------------------------TSQTFDVIISDCTDPIG------PGESLFTSAF 180 (294)
T ss_dssp GCTTEEEEESCTTTTTSC-----------------------------SSCCEEEEEESCCCCCC------TTCCSSCCHH
T ss_pred CCCcEEEEechHHHHHhh-----------------------------ccccCCEEEEeCCCcCC------CchhhcCHHH
Confidence 689999999999999854 56789999999876542 5788999999
Q ss_pred HHHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEE--eec---ccceEEEEEEcCC
Q 038592 389 LLAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEI--DVG---NEENFVLIATGLS 447 (478)
Q Consensus 389 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~--~v~---~~~N~Vl~a~~~~ 447 (478)
++.++++|+|||++++|..++ +......+.++++++|+.+..+ .++ .+.....+|++.+
T Consensus 181 y~~~~~~L~p~Gv~v~q~~sp~~~~~~~~~~~~~l~~~F~~v~~~~~~vPty~~g~w~f~~as~~~ 246 (294)
T 3o4f_A 181 YEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HHHHHHTEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHCSEEEEEEECCTTSSSSCEEEEEEESCT
T ss_pred HHHHHHHhCCCCEEEEecCCcccChHHHHHHHHHHHhhCCceeeeeeeeccCCCcceeheeEECCC
Confidence 999999999999999998776 5566778899999999987444 333 2334556788764
No 2
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.96 E-value=1.1e-28 Score=249.67 Aligned_cols=197 Identities=17% Similarity=0.189 Sum_probs=165.2
Q ss_pred eeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcccchhcHHHHHHHHhh---hcccccccccCCCCCeEE
Q 038592 191 RRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGVLVHVYLVPMVASCAL---IGSYIGERIRFGFRPKAL 267 (478)
Q Consensus 191 ~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~L~~~Y~~~m~~~l~l---~~~~~~~~~~~g~~~~VL 267 (478)
+.|+++++ +.+||.+.+. ||..+++.||++|++.+++ .++. +.+.+||
T Consensus 44 ~g~~L~lD--G~~Qs~~~l~--------------------dP~~le~~Y~e~m~~~~~~l~~~~p~-------p~~~rVL 94 (317)
T 3gjy_A 44 DGWLISIN--GVPSSHIVLG--------------------QPQALEFEYMRWIATGARAFIDAHQD-------ASKLRIT 94 (317)
T ss_dssp TEEEEEET--TEEEEEEETT--------------------CTTCCCSHHHHHHHHHHHHHHHHHSC-------GGGCEEE
T ss_pred ceEEEEEC--CEeEEEEECC--------------------CCcchhhHHHHHHHHHHHhhcccCCC-------CCCCEEE
Confidence 56777774 8999986652 5678899999999999876 3332 1134999
Q ss_pred EEeCchhHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccC
Q 038592 268 CVGVGGGALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKD 346 (478)
Q Consensus 268 vIGlGgG~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~ 346 (478)
+||+|+|+++++|.++ ++.+|++|||||.|+++|++||++..++|++++++||++|+++
T Consensus 95 dIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~-------------------- 154 (317)
T 3gjy_A 95 HLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAES-------------------- 154 (317)
T ss_dssp EESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHT--------------------
T ss_pred EEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhh--------------------
Confidence 9999999999999995 5789999999999999999999987789999999999999864
Q ss_pred CCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC-CchHHHHHHHHHHHhc
Q 038592 347 GNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP-NRSFYDMLIQEFRDVF 425 (478)
Q Consensus 347 ~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~-~~~~~~~v~~~l~~vF 425 (478)
....+||+||+|+++... +|.++++.+||+.++++|+|||+|++|+.+. +....+.++++|+++|
T Consensus 155 --------~~~~~fDvIi~D~~~~~~------~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF 220 (317)
T 3gjy_A 155 --------FTPASRDVIIRDVFAGAI------TPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVF 220 (317)
T ss_dssp --------CCTTCEEEEEECCSTTSC------CCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHC
T ss_pred --------ccCCCCCEEEECCCCccc------cchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHC
Confidence 135689999999877542 4678899999999999999999999999854 3456788999999999
Q ss_pred CccEEEee------cccceEEEEEEcCCCCC
Q 038592 426 QELYEIDV------GNEENFVLIATGLSIVS 450 (478)
Q Consensus 426 ~~v~~~~v------~~~~N~Vl~a~~~~~~~ 450 (478)
++++.+.. ...+|+|++|++.++..
T Consensus 221 ~~v~~~~~~~~~~g~~~gN~Vl~As~~plp~ 251 (317)
T 3gjy_A 221 EHVAVIADPPMLKGRRYGNIILMGSDTEFFS 251 (317)
T ss_dssp SEEEEEECHHHHTTSSCEEEEEEEESSCCCC
T ss_pred CceEEEEecCCCCCCcCceEEEEEECCCCCc
Confidence 99887763 25689999999999876
No 3
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=99.96 E-value=5.9e-29 Score=256.09 Aligned_cols=197 Identities=15% Similarity=0.144 Sum_probs=157.2
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+.+.++|++++|+||...|+|. ..|+|+++++ +.+|+. + .|
T Consensus 149 y~v~~vl~~~~S~yQ~I~V~es------------~~~Gr~L~LD--G~~Q~t-----e-----------------~D--- 189 (381)
T 3c6k_A 149 YDIDEVVYDEDSPYQNIKILHS------------KQFGNILILS--GDVNLA-----E-----------------SD--- 189 (381)
T ss_dssp CCEEEEEEEEECSSCEEEEEEE------------TTTEEEEEET--TEEEEE-----T-----------------TC---
T ss_pred EEeEEEEEeCCCCCceEEEEEc------------CCcceEEEEC--Cceeee-----C-----------------Ch---
Confidence 4568999999999999999983 1367777774 899975 1 12
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC------
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE------ 308 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~------ 308 (478)
+.||++|++.+++.+ +|++|||||+|+|++++++.++...+|++|||||+|+++|++||...
T Consensus 190 --~~Y~e~l~h~~l~~~----------~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d 257 (381)
T 3c6k_A 190 --LAYTRAIMGSGKEDY----------TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD 257 (381)
T ss_dssp --HHHHHHHTTTTCCCC----------TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS
T ss_pred --HHHHHHHHHHHhhcC----------CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhc
Confidence 569999998865543 26899999999999999999987789999999999999999998642
Q ss_pred --CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChH
Q 038592 309 --DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRK 386 (478)
Q Consensus 309 --~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~ 386 (478)
.++|++++++||++|+++.+. ...+||+||+|+++.....+...|+..+++.
T Consensus 258 ~pr~~rv~vii~Da~~fl~~~~~--------------------------~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~ 311 (381)
T 3c6k_A 258 NLKGDCYQVLIEDCIPVLKRYAK--------------------------EGREFDYVINDLTAVPISTSPEEDSTWEFLR 311 (381)
T ss_dssp SSEETTEEEEESCHHHHHHHHHH--------------------------HTCCEEEEEEECCSSCCCCC----CHHHHHH
T ss_pred cccccceeeehHHHHHHHHhhhh--------------------------ccCceeEEEECCCCCcccCcccCcchHHHHH
Confidence 347899999999999987543 3568999999998754333333456678999
Q ss_pred HHHHHHHHccCcCcEEEEEeCCC-CchHHHHHHHHHHHhcCcc
Q 038592 387 DVLLAARLILSDFGIFVMNVIPP-NRSFYDMLIQEFRDVFQEL 428 (478)
Q Consensus 387 efl~~~~~~L~~~Gilv~N~~~~-~~~~~~~v~~~l~~vF~~v 428 (478)
+||+.++++|+|+|+++++..+. ..+....+.++|+++|+.+
T Consensus 312 eFy~~~~~~L~p~GVlv~Q~~s~~~~~~~~~i~~tl~~vF~~v 354 (381)
T 3c6k_A 312 LILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPV 354 (381)
T ss_dssp HHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCE
T ss_pred HHHHHHHHhcCCCCEEEEecCCCcchhHHHHHHHHHHHhCCcc
Confidence 99999999999999999987554 2344677889999999976
No 4
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.93 E-value=2e-24 Score=214.24 Aligned_cols=207 Identities=20% Similarity=0.240 Sum_probs=163.4
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
++.++++++.+|+|+...|+++- .++|.++++ +.+||.. .|
T Consensus 17 ~~~~~~l~~~~s~~~~i~v~~~~------------~~g~~L~ld--g~~q~~~----------------------~d--- 57 (275)
T 1iy9_A 17 MKVNKTLHTEQTEFQHLEMVETE------------EFGNMLFLD--GMVMTSE----------------------KD--- 57 (275)
T ss_dssp EEEEEEEEEEECSSCEEEEEEET------------TTEEEEEET--TEEEEET----------------------TT---
T ss_pred EeeeeEEEEEECCCceEEEEEcC------------CCCEEEEEC--CEEeecc----------------------cc---
Confidence 67789999999999877777621 244556664 6789751 02
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhc-----CCC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYF-----GLE 308 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~F-----g~~ 308 (478)
.+.||++|.+..++.++ .+.+||+||+|+|.++..+.+++ ..+|++||+||.|+++|+++| ++
T Consensus 58 -e~~y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~- 126 (275)
T 1iy9_A 58 -EFVYHEMVAHVPLFTHP---------NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKL- 126 (275)
T ss_dssp -HHHHHHHHHHHHHHHSS---------SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTT-
T ss_pred -hhHHHHHHHHHHHhhCC---------CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhcccc-
Confidence 58899988875444332 26899999999999999999886 479999999999999999998 33
Q ss_pred CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHH
Q 038592 309 DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDV 388 (478)
Q Consensus 309 ~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~ef 388 (478)
.++|++++++|+++++.+ ...+||+|++|..... .|+..+++.+|
T Consensus 127 ~~~rv~v~~~D~~~~l~~-----------------------------~~~~fD~Ii~d~~~~~------~~~~~l~~~~~ 171 (275)
T 1iy9_A 127 DDPRVDVQVDDGFMHIAK-----------------------------SENQYDVIMVDSTEPV------GPAVNLFTKGF 171 (275)
T ss_dssp TSTTEEEEESCSHHHHHT-----------------------------CCSCEEEEEESCSSCC------SCCCCCSTTHH
T ss_pred CCCceEEEECcHHHHHhh-----------------------------CCCCeeEEEECCCCCC------CcchhhhHHHH
Confidence 478999999999999864 3567999999876532 25778899999
Q ss_pred HHHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEEe--ec---ccceEEEEEEcC
Q 038592 389 LLAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEID--VG---NEENFVLIATGL 446 (478)
Q Consensus 389 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--v~---~~~N~Vl~a~~~ 446 (478)
++.++++|+|||++++|..++ +.+....+.++|+++|+++..+. ++ .+.+.+++|++.
T Consensus 172 ~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ask~ 236 (275)
T 1iy9_A 172 YAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKK 236 (275)
T ss_dssp HHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEEeeCC
Confidence 999999999999999998764 46667889999999999865443 33 334666788875
No 5
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.92 E-value=8.3e-24 Score=213.55 Aligned_cols=211 Identities=18% Similarity=0.165 Sum_probs=166.1
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
++.++++++.+|+|+...|+|+- .++++++++ +.+||..+
T Consensus 19 ~~~~~vl~~~~s~~q~i~v~~~~------------~~g~~l~ld--g~~q~~~~-------------------------- 58 (314)
T 1uir_A 19 RRMERVIASGKTPFQDYFLFESK------------GFGKVLILD--KDVQSTER-------------------------- 58 (314)
T ss_dssp EECSEEEEEEECSSCEEEEEEET------------TTEEEEEET--TEEEEETT--------------------------
T ss_pred EecceEEEEEECCCCCEEEEEcC------------CCcEEEEEC--CEEeeeec--------------------------
Confidence 56789999999999999888731 256667764 68998621
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC-----C
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL-----E 308 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~-----~ 308 (478)
..+.||++|.+..++.++ .+.+||+||+|+|.++..+.+++ ..+|++||+||.++++|+++|.. .
T Consensus 59 ~e~~Y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~ 129 (314)
T 1uir_A 59 DEYIYHETLVHPAMLTHP---------EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAF 129 (314)
T ss_dssp THHHHHHHHHHHHHHHSS---------CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGG
T ss_pred chhHHHHHHHHHHHhcCC---------CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccc
Confidence 257899999876544432 26899999999999999999886 57999999999999999999852 1
Q ss_pred CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHH
Q 038592 309 DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDV 388 (478)
Q Consensus 309 ~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~ef 388 (478)
.+++++++++|+.+++.. ...+||+|++|..... ++.+|+..+++.+|
T Consensus 130 ~~~~v~~~~~D~~~~l~~-----------------------------~~~~fD~Ii~d~~~~~---~~~~~~~~l~~~~~ 177 (314)
T 1uir_A 130 DDPRAVLVIDDARAYLER-----------------------------TEERYDVVIIDLTDPV---GEDNPARLLYTVEF 177 (314)
T ss_dssp GCTTEEEEESCHHHHHHH-----------------------------CCCCEEEEEEECCCCB---STTCGGGGGSSHHH
T ss_pred cCCceEEEEchHHHHHHh-----------------------------cCCCccEEEECCCCcc---cccCcchhccHHHH
Confidence 368999999999999865 3567999999976533 12346677889999
Q ss_pred HHHHHHccCcCcEEEEEeCCC---CchHHHHHHHHHHHhcCccEEE----eecccceEEEEEEcC
Q 038592 389 LLAARLILSDFGIFVMNVIPP---NRSFYDMLIQEFRDVFQELYEI----DVGNEENFVLIATGL 446 (478)
Q Consensus 389 l~~~~~~L~~~Gilv~N~~~~---~~~~~~~v~~~l~~vF~~v~~~----~v~~~~N~Vl~a~~~ 446 (478)
++.++++|+|||++++|..++ +.+....+.+.++++|+++..+ +..++.+.+++|++.
T Consensus 178 l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~g~~~~~~as~~ 242 (314)
T 1uir_A 178 YRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASDA 242 (314)
T ss_dssp HHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEESS
T ss_pred HHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCCCCeEEEEEEECC
Confidence 999999999999999997553 3566788999999999976433 234446778889987
No 6
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.92 E-value=1.1e-23 Score=216.21 Aligned_cols=207 Identities=16% Similarity=0.132 Sum_probs=152.6
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+++.+++++.+|+||...|+|.- .|++++++ ++.+|+.. .|
T Consensus 132 ~~v~~vl~~~~S~yQ~I~V~es~------------~~G~~L~L--DG~~q~te----------------------~D--- 172 (364)
T 2qfm_A 132 YDIDEVVYDEDSPYQNIKILHSK------------QFGNILIL--SGDVNLAE----------------------SD--- 172 (364)
T ss_dssp CCEEEEEEEEECSSCEEEEEEET------------TTEEEEEE--TTEEEEET----------------------TC---
T ss_pred EEeeeEEEeccCCCeeEEEEEeC------------CcceEEEE--CCEEeeec----------------------Cc---
Confidence 45678999999999998888721 24556666 48999850 12
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-----C
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-----D 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-----~ 309 (478)
+.||++|++..+ .+ .+|++||+||+|+|++++.+.++...+|++|||||.|+++|++||... .
T Consensus 173 --~~YhE~l~~~~~-~~---------p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~ 240 (364)
T 2qfm_A 173 --LAYTRAIMGSGK-ED---------YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLD 240 (364)
T ss_dssp --HHHHHHHTTTTC-CC---------CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCS
T ss_pred --hHHHHHHhhhhh-hC---------CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhcccccc
Confidence 679999877543 22 237899999999999999999887689999999999999999999732 2
Q ss_pred C---CCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCC-CCCCCCCCCCCCCCCh
Q 038592 310 G---EFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDS-GDARNGTSAPPVEFVR 385 (478)
Q Consensus 310 d---~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s-~d~~~g~s~Pp~~f~~ 385 (478)
+ +|++++++||++|+++... .+.+||+||+|.++ +... .|..+++
T Consensus 241 dp~~~rv~vi~~Da~~~L~~~~~--------------------------~~~~fDvII~D~~d~P~~~-----~p~~L~t 289 (364)
T 2qfm_A 241 NLKGDCYQVLIEDCIPVLKRYAK--------------------------EGREFDYVINDLTAVPIST-----SPEEDST 289 (364)
T ss_dssp SSEETTEEEEESCHHHHHHHHHH--------------------------HTCCEEEEEEECCSSCCCC-----C----CH
T ss_pred ccCCCcEEEEECcHHHHHHhhhc--------------------------cCCCceEEEECCCCcccCc-----CchhhhH
Confidence 3 3899999999999987432 24679999999866 3211 2445899
Q ss_pred HHHHHHH----HHccCcCcEEEEEeCCCCchHHHHHHH-HHHHhcCccEE----EeecccceEEEEE
Q 038592 386 KDVLLAA----RLILSDFGIFVMNVIPPNRSFYDMLIQ-EFRDVFQELYE----IDVGNEENFVLIA 443 (478)
Q Consensus 386 ~efl~~~----~~~L~~~Gilv~N~~~~~~~~~~~v~~-~l~~vF~~v~~----~~v~~~~N~Vl~a 443 (478)
.+|++.+ +++|+|||++++|..+........+++ .|+++|+.|.. ..++.......|+
T Consensus 290 ~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~~~~~~~l~~~F~~v~~~~~~~~vPsy~~~w~f~ 356 (364)
T 2qfm_A 290 WEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEALSLYEEQLGRLYCPVEFSKEIVCVPSYLELWVFY 356 (364)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHHHHHHHHHTTSSSCEEEEEEEECCGGGSSCEEEE
T ss_pred HHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHHHHHHHHHHHhCCceEEeeEeeecCCchhheEeE
Confidence 9999999 999999999999988775433334445 48899998743 4455443344443
No 7
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.91 E-value=2.1e-24 Score=216.39 Aligned_cols=209 Identities=19% Similarity=0.176 Sum_probs=151.1
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+++.+++++++|+||...|+++- .+++++++ ++.+|+.. .|
T Consensus 25 ~~~~~~l~~~~s~~q~i~v~~~~------------~~g~~L~l--dg~~~~~~----------------------~d--- 65 (294)
T 3adn_A 25 FAVDNVLYHEKTDHQDLIIFENA------------AFGRVMAL--DGVVQTTE----------------------RD--- 65 (294)
T ss_dssp ECCSCEEEEC----CCCEEECCT------------TTCCEEEE--TTEEEEET----------------------TT---
T ss_pred EEcccEEEEeECCCceEEEEEcC------------CcceEEEE--CCeEeecc----------------------Cc---
Confidence 45678999999999999888721 24444454 47889740 12
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-----
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE----- 308 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~----- 308 (478)
.+.||++|++..++.++ .+.+||+||+|+|++++.+.++. ..+|++||||+.|+++|+++|...
T Consensus 66 -e~~Y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~ 135 (294)
T 3adn_A 66 -EFIYHEMMTHVPLLAHG---------HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSY 135 (294)
T ss_dssp -HHHHHHHHHHHHHHHST---------TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCT
T ss_pred -hhHHHHHHHHHHHhcCC---------CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccc
Confidence 68899999887555442 37899999999999999999986 469999999999999999998532
Q ss_pred CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHH
Q 038592 309 DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDV 388 (478)
Q Consensus 309 ~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~ef 388 (478)
.++|++++++|+.+|++. ...+||+||+|..+.. .|+..+++.+|
T Consensus 136 ~~~rv~~~~~D~~~~l~~-----------------------------~~~~fDvIi~D~~~p~------~~~~~l~~~~f 180 (294)
T 3adn_A 136 DDPRFKLVIDDGVNFVNQ-----------------------------TSQTFDVIISDCTDPI------GPGESLFTSAF 180 (294)
T ss_dssp TCTTCCEECSCSCC---C-----------------------------CCCCEEEEEECC----------------CCHHH
T ss_pred cCCceEEEEChHHHHHhh-----------------------------cCCCccEEEECCCCcc------CcchhccHHHH
Confidence 478999999999999853 4578999999876532 25677899999
Q ss_pred HHHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEE--Eeeccc--ce-EEEEEEcCC
Q 038592 389 LLAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYE--IDVGNE--EN-FVLIATGLS 447 (478)
Q Consensus 389 l~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~--~~v~~~--~N-~Vl~a~~~~ 447 (478)
++.++++|+|||++++|..++ ..+....+.++++++|+.+.. ..+... ++ ..++|++.+
T Consensus 181 ~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~~ 246 (294)
T 3adn_A 181 YEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDND 246 (294)
T ss_dssp HHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEEEEESCT
T ss_pred HHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEEEEeCCc
Confidence 999999999999999998654 456678899999999998643 334432 34 346788765
No 8
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.90 E-value=2.7e-22 Score=199.22 Aligned_cols=208 Identities=22% Similarity=0.224 Sum_probs=158.3
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
++.++++++.+|+|+...|+++- .++|.++++ +.+|+.. .|
T Consensus 17 ~~~~~~l~~~~s~~~~i~v~~~~------------~~g~~L~ld--g~~q~~~----------------------~d--- 57 (281)
T 1mjf_A 17 FKIKKKIYEKLSKYQKIEVYETE------------GFGRLLALD--GTVQLVT----------------------LG--- 57 (281)
T ss_dssp ECEEEEEEEEECSSCEEEEEEES------------SSCEEEEET--TEEEEET----------------------TT---
T ss_pred EeeccEEEEeeCCCccEEEEECC------------CccEEEEEC--CEeeecc----------------------cc---
Confidence 56789999999999988887731 233445553 6899751 01
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhc----CCC--
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYF----GLE-- 308 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~F----g~~-- 308 (478)
.+.||++|.+...+..+ .+.+||+||+|+|.++..+.++...+|++||+||.++++|+++| ++.
T Consensus 58 -~~~y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~ 127 (281)
T 1mjf_A 58 -ERSYHEPLVHPAMLAHP---------KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEA 127 (281)
T ss_dssp -THHHHHHHHHHHHHHSS---------CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHH
T ss_pred -chHHHHHHHHHHHhhCC---------CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccc
Confidence 57899998865433332 26799999999999999999884469999999999999999999 321
Q ss_pred ----CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCC
Q 038592 309 ----DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFV 384 (478)
Q Consensus 309 ----~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~ 384 (478)
.+++++++++|+.+++.. ..+||+|++|..... +|+..++
T Consensus 128 ~~~~~~~~v~~~~~D~~~~l~~------------------------------~~~fD~Ii~d~~~~~------~~~~~l~ 171 (281)
T 1mjf_A 128 MLNGKHEKAKLTIGDGFEFIKN------------------------------NRGFDVIIADSTDPV------GPAKVLF 171 (281)
T ss_dssp HHTTCCSSEEEEESCHHHHHHH------------------------------CCCEEEEEEECCCCC-----------TT
T ss_pred cccCCCCcEEEEECchHHHhcc------------------------------cCCeeEEEECCCCCC------Ccchhhh
Confidence 368999999999999853 346999999976532 2567778
Q ss_pred hHHHHHHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEEe--e--cccceEEEEEEcCC
Q 038592 385 RKDVLLAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEID--V--GNEENFVLIATGLS 447 (478)
Q Consensus 385 ~~efl~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--v--~~~~N~Vl~a~~~~ 447 (478)
+.+|++.++++|+|||++++|..++ +.+..+.+.+.++++|+++..+. + .++.+.+++|++.+
T Consensus 172 ~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~g~~~~~~as~~~ 240 (281)
T 1mjf_A 172 SEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGYASPWAFLVGVKGD 240 (281)
T ss_dssp SHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTSSSSEEEEEEEESS
T ss_pred HHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCCCceEEEEEeeCCC
Confidence 8999999999999999999997554 56677889999999999865443 2 33457788998873
No 9
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.90 E-value=3.8e-22 Score=198.50 Aligned_cols=208 Identities=19% Similarity=0.215 Sum_probs=159.3
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
++..+++++.+|+|+...|+|+- .++++++++ +.+|+.. .|
T Consensus 20 ~~~~~~l~~~~s~~q~i~v~~~~------------~~g~~l~ld--g~~q~~~----------------------~~--- 60 (283)
T 2i7c_A 20 LKIKKILYETKSKYQNVLVFEST------------TYGKVLVLD--GVIQLTE----------------------KD--- 60 (283)
T ss_dssp EEEEEEEEEEECSSSEEEEEEES------------SSCEEEEET--TEEEEET----------------------TT---
T ss_pred EecccEEEEEECCCccEEEEEcC------------CCCEEEEEC--CEeeecc----------------------cc---
Confidence 56789999999999987777631 244555554 7889740 01
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC----C
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE----D 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~----~ 309 (478)
.+.||++|.+..++..+ .+.+||+||+|+|.+++.+.++. ..+|++||+||.++++|+++|... .
T Consensus 61 -e~~Y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~ 130 (283)
T 2i7c_A 61 -EFAYHEMMTHVPMTVSK---------EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE 130 (283)
T ss_dssp -HHHHHHHHHHHHHTTSS---------SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG
T ss_pred -hhhHHHHHHHHHHhcCC---------CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccC
Confidence 57898876654333222 36899999999999999999886 579999999999999999998643 3
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
++|++++++|+.+++.. ...+||+|++|..+.. .|+..+++.+|+
T Consensus 131 ~~~v~~~~~D~~~~l~~-----------------------------~~~~fD~Ii~d~~~~~------~~~~~l~~~~~l 175 (283)
T 2i7c_A 131 DKRVNVFIEDASKFLEN-----------------------------VTNTYDVIIVDSSDPI------GPAETLFNQNFY 175 (283)
T ss_dssp STTEEEEESCHHHHHHH-----------------------------CCSCEEEEEEECCCTT------TGGGGGSSHHHH
T ss_pred CCcEEEEECChHHHHHh-----------------------------CCCCceEEEEcCCCCC------CcchhhhHHHHH
Confidence 68999999999999865 3567999999975432 245678889999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccE--EEeecc--cce-EEEEEEcC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELY--EIDVGN--EEN-FVLIATGL 446 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~--~~~v~~--~~N-~Vl~a~~~ 446 (478)
+.++++|+|||++++|..++ +.+....+.+.++++|+.+. ...+.. .++ ..++|++.
T Consensus 176 ~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~~s~~ 239 (283)
T 2i7c_A 176 EKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKT 239 (283)
T ss_dssp HHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESS
T ss_pred HHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEEEeCC
Confidence 99999999999999998764 45667888999999999764 344443 244 45667765
No 10
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.89 E-value=9e-22 Score=199.04 Aligned_cols=209 Identities=19% Similarity=0.197 Sum_probs=151.1
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
++..+++++.+|+|+...|+|+- .+++.++++ +.+|+.. .|
T Consensus 50 ~~~~~vl~~~~s~~q~i~v~~~~------------~~g~~l~ld--g~~q~~~----------------------~d--- 90 (314)
T 2b2c_A 50 LQVKKVLFHEKSKYQDVLVFEST------------TYGNVLVLD--GIVQATE----------------------RD--- 90 (314)
T ss_dssp EEEEEEEEEEECSSCEEEEEEET------------TTEEEEEET--TEEEEES----------------------SS---
T ss_pred eecccEEEEEECCCCCEEEEEcC------------CCCEEEEEC--CEeecCC----------------------cc---
Confidence 56789999999999987777621 244555654 7888740 11
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC----C
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE----D 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~----~ 309 (478)
.+.||++|++..++..+ .+.+||+||+|+|.++..+.++. ..+|++||+||.++++|+++|... .
T Consensus 91 -e~~Y~e~l~~l~l~~~~---------~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~ 160 (314)
T 2b2c_A 91 -EFSYQEMLAHLPMFAHP---------DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS 160 (314)
T ss_dssp -SSHHHHHHHHHHHHHSS---------SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGG
T ss_pred -hhHHHHHHHHHHHhhCC---------CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccC
Confidence 57898876654333322 26899999999999999999886 579999999999999999999642 3
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
++|++++++|+.+++.. ...+||+|++|..+.. .|+..+++.+|+
T Consensus 161 ~~rv~~~~~D~~~~l~~-----------------------------~~~~fD~Ii~d~~~~~------~~~~~l~t~~~l 205 (314)
T 2b2c_A 161 HPKLDLFCGDGFEFLKN-----------------------------HKNEFDVIITDSSDPV------GPAESLFGQSYY 205 (314)
T ss_dssp CTTEEEECSCHHHHHHH-----------------------------CTTCEEEEEECCC-------------------HH
T ss_pred CCCEEEEEChHHHHHHh-----------------------------cCCCceEEEEcCCCCC------CcchhhhHHHHH
Confidence 68999999999999865 3567999999875432 255678889999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEE--eecc--cce-EEEEEEcCC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEI--DVGN--EEN-FVLIATGLS 447 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~--~v~~--~~N-~Vl~a~~~~ 447 (478)
+.++++|+|||+++++..+. +......+.+.++++|+++..+ .++. .++ .+++|++.+
T Consensus 206 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~~iP~~~~g~~g~~~ask~~ 270 (314)
T 2b2c_A 206 ELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQSIVSTYPSGSMGYLICAKNA 270 (314)
T ss_dssp HHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEEEecCcCCCceEEEEEeCCC
Confidence 99999999999999997554 4556778899999999976433 3332 234 467777663
No 11
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.89 E-value=1.2e-21 Score=196.22 Aligned_cols=209 Identities=16% Similarity=0.168 Sum_probs=155.3
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+...+++++.+|+|+...|+++- .+++.++++ +.+|+.. .|
T Consensus 32 ~~~~~~l~~~~s~~q~i~v~~~~------------~~g~~l~ld--g~~~~~~----------------------~d--- 72 (296)
T 1inl_A 32 MKMNRVIYSGQSDIQRIDIFENP------------DLGVVFALD--GITMTTE----------------------KD--- 72 (296)
T ss_dssp EECSEEEEEEECSSCEEEEEEET------------TTEEEEEET--TEEEEET----------------------TT---
T ss_pred eecccEEEEEECCCccEEEEEcC------------CCcEEEEEC--CEEeecc----------------------cc---
Confidence 56788999999999887777621 244455554 6788740 11
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC----CC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL----ED 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~----~~ 309 (478)
.+.||++|.+..++.++ .+.+||+||+|+|.++..+.++. ..+|++||+|+.++++|+++|.. ..
T Consensus 73 -e~~y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~ 142 (296)
T 1inl_A 73 -EFMYHEMLAHVPMFLHP---------NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFD 142 (296)
T ss_dssp -HHHHHHHHHHHHHHHSS---------SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGG
T ss_pred -hhHHHHHHhHHHHhcCC---------CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccC
Confidence 57899988765444332 26799999999999999999885 57999999999999999999831 23
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
+++++++++|+.+++.. ...+||+|++|+.+.. . .|+..+++.+|+
T Consensus 143 ~~~v~~~~~D~~~~l~~-----------------------------~~~~fD~Ii~d~~~~~-~----~~~~~l~~~~~l 188 (296)
T 1inl_A 143 DPRAEIVIANGAEYVRK-----------------------------FKNEFDVIIIDSTDPT-A----GQGGHLFTEEFY 188 (296)
T ss_dssp CTTEEEEESCHHHHGGG-----------------------------CSSCEEEEEEEC---------------CCSHHHH
T ss_pred CCceEEEECcHHHHHhh-----------------------------CCCCceEEEEcCCCcc-c----CchhhhhHHHHH
Confidence 68999999999999743 3567999999976531 1 256678889999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEEe--ec---ccceEEEEEEcC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEID--VG---NEENFVLIATGL 446 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~--v~---~~~N~Vl~a~~~ 446 (478)
+.++++|+|||+++++..++ +.+....+++.++++|+.+..+. +. .+.+.+++|++.
T Consensus 189 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~as~~ 252 (296)
T 1inl_A 189 QACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTFASKG 252 (296)
T ss_dssp HHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEEEESS
T ss_pred HHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEEecCC
Confidence 99999999999999998764 45667889999999999865443 33 334566788865
No 12
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.87 E-value=8.7e-21 Score=190.84 Aligned_cols=209 Identities=15% Similarity=0.193 Sum_probs=150.3
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+++.+++++.+|+|+...|+++- .+-|.|++ ++.+|+.- .
T Consensus 37 ~~~~~~l~~~~s~~q~i~v~~~~-----------~~g~~L~l---dg~~~~~~--------------------------~ 76 (304)
T 2o07_A 37 LQVEQLLHHRRSRYQDILVFRSK-----------TYGNVLVL---DGVIQCTE--------------------------R 76 (304)
T ss_dssp EEEEEEEEEEECSSSEEEEEEES-----------SSCEEEEE---TTEEEEET--------------------------T
T ss_pred EEeccEEEEEECCCcEEEEEEcC-----------CCceEEEE---CCEEEeec--------------------------c
Confidence 56789999999999887777631 12355555 37889740 0
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC----CC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL----ED 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~----~~ 309 (478)
..+.||++|.+..++..+ .+.+||+||+|+|.++..+.++. ..+|++||+|+.++++|+++|.. ..
T Consensus 77 de~~y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~ 147 (304)
T 2o07_A 77 DEFSYQEMIANLPLCSHP---------NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYS 147 (304)
T ss_dssp THHHHHHHHHHHHHTTSS---------SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG
T ss_pred cchHHHHHHHHHHHhhCC---------CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccC
Confidence 157898877654332221 36899999999999999999886 47999999999999999999853 13
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
+++++++++|+.+++.. ...+||+|++|..... .|+..+.+.+|+
T Consensus 148 ~~rv~v~~~Da~~~l~~-----------------------------~~~~fD~Ii~d~~~~~------~~~~~l~~~~~l 192 (304)
T 2o07_A 148 SSKLTLHVGDGFEFMKQ-----------------------------NQDAFDVIITDSSDPM------GPAESLFKESYY 192 (304)
T ss_dssp CTTEEEEESCHHHHHHT-----------------------------CSSCEEEEEEECC-----------------CHHH
T ss_pred CCcEEEEECcHHHHHhh-----------------------------CCCCceEEEECCCCCC------CcchhhhHHHHH
Confidence 68999999999999854 3567999999976432 245567789999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEE--eecc---cceEEEEEEcCC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEI--DVGN---EENFVLIATGLS 447 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~--~v~~---~~N~Vl~a~~~~ 447 (478)
+.++++|+|||+++++..+. +....+.+.+.++++|+++... .+.. +.-..++|++.+
T Consensus 193 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~as~~~ 257 (304)
T 2o07_A 193 QLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSKNP 257 (304)
T ss_dssp HHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEEEeCCc
Confidence 99999999999999987543 4566778899999999976333 2322 222346787664
No 13
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.87 E-value=2.5e-20 Score=188.86 Aligned_cols=209 Identities=19% Similarity=0.234 Sum_probs=158.1
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
++..+++++.+|+|+...+++.- .+-|.|. . .+.+|+. . .|
T Consensus 58 ~~~~~~l~~~~s~~q~i~v~~~~-----------~~g~~l~-l--dg~~~~~-----~-----------------~d--- 98 (321)
T 2pt6_A 58 LKIKKILYETKSKYQNVLVFEST-----------TYGKVLV-L--DGVIQLT-----E-----------------KD--- 98 (321)
T ss_dssp EEEEEEEEEEECSSCEEEEEEES-----------SSCEEEE-E--TTEEEEE-----T-----------------TT---
T ss_pred EecccEEEEEECCCceEEEEEcC-----------CCcEEEE-E--CCEeeeC-----c-----------------cc---
Confidence 67789999999999877666521 1234554 4 3677863 0 12
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC----C
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE----D 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~----~ 309 (478)
.+.||++|++..++..+ .+.+||+||+|+|.++..+.+++ ..+|++||+||.++++|++++... .
T Consensus 99 -e~~y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~ 168 (321)
T 2pt6_A 99 -EFAYHEMMTHVPMTVSK---------EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYE 168 (321)
T ss_dssp -HHHHHHHHHHHHHHHSS---------SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGG
T ss_pred -chHHHHHHHHHHHhcCC---------CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC
Confidence 57899987764333322 26899999999999999999886 579999999999999999998641 2
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
+++++++++|+.+++.. ...+||+|++|..+.. .|+..+++.+|+
T Consensus 169 ~~~v~~~~~D~~~~l~~-----------------------------~~~~fDvIi~d~~~p~------~~~~~l~~~~~l 213 (321)
T 2pt6_A 169 DKRVNVFIEDASKFLEN-----------------------------VTNTYDVIIVDSSDPI------GPAETLFNQNFY 213 (321)
T ss_dssp STTEEEEESCHHHHHHH-----------------------------CCSCEEEEEEECCCSS------SGGGGGSSHHHH
T ss_pred CCcEEEEEccHHHHHhh-----------------------------cCCCceEEEECCcCCC------CcchhhhHHHHH
Confidence 68999999999999865 3567999999875432 145667889999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEE--eecc--cceE-EEEEEcCC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEI--DVGN--EENF-VLIATGLS 447 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~--~v~~--~~N~-Vl~a~~~~ 447 (478)
+.+++.|+|||+++++..++ +.+....+.+.++++|+.+..+ .+.. .+++ .++|++.+
T Consensus 214 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~as~~~ 278 (321)
T 2pt6_A 214 EKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTD 278 (321)
T ss_dssp HHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEEESST
T ss_pred HHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEEeeCCC
Confidence 99999999999999998665 5566788999999999976444 3332 3455 46788763
No 14
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.86 E-value=3.9e-20 Score=185.78 Aligned_cols=213 Identities=17% Similarity=0.148 Sum_probs=155.5
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+...+++++.+|+|+...|++.- .++ .++++++++ +.+|+...
T Consensus 34 ~~~~~~l~~~~s~~q~i~v~~~~---p~g------~~g~~l~ld--g~~~~~~~-------------------------- 76 (304)
T 3bwc_A 34 LRVEKVLYDAPTKFQHLTIFESD---PKG------PWGTVMALD--GCIQVTDY-------------------------- 76 (304)
T ss_dssp EEEEEEEEEEECSSSEEEEEEEC---TTS------SCCEEEEET--TEEEEETT--------------------------
T ss_pred EecccEEEEeECCCCCEEEEEec---CCC------ccceEEEEC--Ceeeeecc--------------------------
Confidence 56789999999999887777631 111 355556664 68897510
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcC----CCC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFG----LED 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg----~~~ 309 (478)
..+.|+++|.+..++..+ .+.+||+||+|+|.++..+.++. ..+|++||+|+.++++|++++. ...
T Consensus 77 de~~y~e~l~~~~l~~~~---------~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~ 147 (304)
T 3bwc_A 77 DEFVYHEVLGHTSLCSHP---------KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLA 147 (304)
T ss_dssp THHHHHHHHHHHHHTTSS---------SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG
T ss_pred cchHHHHHHhhhhhhcCC---------CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccC
Confidence 157899888765333221 36899999999999999999886 4799999999999999999982 124
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
+++++++++|+.+++.+ ....+||+|++|..... .|+..+++.+|+
T Consensus 148 ~~~v~~~~~D~~~~~~~----------------------------~~~~~fDvIi~d~~~~~------~~~~~l~~~~~l 193 (304)
T 3bwc_A 148 DPRATVRVGDGLAFVRQ----------------------------TPDNTYDVVIIDTTDPA------GPASKLFGEAFY 193 (304)
T ss_dssp CTTEEEEESCHHHHHHS----------------------------SCTTCEEEEEEECC---------------CCHHHH
T ss_pred CCcEEEEECcHHHHHHh----------------------------ccCCceeEEEECCCCcc------ccchhhhHHHHH
Confidence 68999999999999743 03567999999875532 256778889999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHh-cCccEEEe--ec---ccceEEEEEEcCC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDV-FQELYEID--VG---NEENFVLIATGLS 447 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~v-F~~v~~~~--v~---~~~N~Vl~a~~~~ 447 (478)
+.++++|+|||+++++..++ .....+.+.+.|+++ |+.+..+. +. .+....++|++.+
T Consensus 194 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~~~ 259 (304)
T 3bwc_A 194 KDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSKKA 259 (304)
T ss_dssp HHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEESSS
T ss_pred HHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeCCc
Confidence 99999999999999998764 445677889999999 99775554 22 2233456788764
No 15
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.85 E-value=1e-20 Score=186.59 Aligned_cols=194 Identities=11% Similarity=-0.003 Sum_probs=148.8
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+++++++++++|+|+...|+++- .++++++++ +. ||.. .|
T Consensus 15 ~~~~~vl~~~~s~~q~i~v~~~~------------~~g~~l~ld--g~-q~~~----------------------~d--- 54 (262)
T 2cmg_A 15 YTIEAKLLDVRSEHNILEIFKSK------------DFGEIAMLN--RQ-LLFK----------------------NF--- 54 (262)
T ss_dssp EECSEEEEEEECSSCEEEEEEET------------TTEEEEEET--TE-EEEG----------------------GG---
T ss_pred EEEeeEEEeeECCCceEEEEECC------------CccEEEEEc--Cc-cccc----------------------ch---
Confidence 56789999999999988887721 244445553 66 8751 01
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC----CC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE----DG 310 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~----~d 310 (478)
.+.||++|.+..++.++ .+.+||+||+|+|.+++.+.++ +.+|++||+||.|+++|+++|... .+
T Consensus 55 -~~~y~e~l~~~~~~~~~---------~~~~VL~iG~G~G~~~~~ll~~-~~~v~~veid~~~i~~ar~~~~~~~~~~~~ 123 (262)
T 2cmg_A 55 -LHIESELLAHMGGCTKK---------ELKEVLIVDGFDLELAHQLFKY-DTHIDFVQADEKILDSFISFFPHFHEVKNN 123 (262)
T ss_dssp -THHHHHHHHHHHHTTSS---------CCCEEEEESSCCHHHHHHHTTS-SCEEEEECSCHHHHGGGTTTSTTHHHHHTC
T ss_pred -HHHHHHHHHHHhhhcCC---------CCCEEEEEeCCcCHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhhccccCC
Confidence 57899988876544332 3689999999999999988888 489999999999999999998541 46
Q ss_pred CCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHH
Q 038592 311 EFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLL 390 (478)
Q Consensus 311 ~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~ 390 (478)
+|++++++||.+|+ .+||+|++|.. + | ..|++
T Consensus 124 ~rv~~~~~D~~~~~---------------------------------~~fD~Ii~d~~--d--------p-----~~~~~ 155 (262)
T 2cmg_A 124 KNFTHAKQLLDLDI---------------------------------KKYDLIFCLQE--P--------D-----IHRID 155 (262)
T ss_dssp TTEEEESSGGGSCC---------------------------------CCEEEEEESSC--C--------C-----HHHHH
T ss_pred CeEEEEechHHHHH---------------------------------hhCCEEEECCC--C--------h-----HHHHH
Confidence 89999999998873 46999999842 2 2 23999
Q ss_pred HHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccEEEee--c-ccceEEEEEEcCC
Q 038592 391 AARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELYEIDV--G-NEENFVLIATGLS 447 (478)
Q Consensus 391 ~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~~~~v--~-~~~N~Vl~a~~~~ 447 (478)
.+++.|+|||+++++..++ +......+.++++++|+.+..+.. + .+.+.+++|++.+
T Consensus 156 ~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~vP~~g~~~~~~as~~~ 217 (262)
T 2cmg_A 156 GLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKT 217 (262)
T ss_dssp HHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEEECCTTCTTCCEEEEEEESSC
T ss_pred HHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEEEEEccCCCcccEEEEeeCCC
Confidence 9999999999999987665 445677889999999998755542 2 3456667898763
No 16
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.83 E-value=3.7e-19 Score=181.40 Aligned_cols=209 Identities=15% Similarity=0.207 Sum_probs=154.0
Q ss_pred ceeeEEEEeEecccCceEEEEEeeccccCCccccceeeEEEEeeCCCeEEeeeeecccccccccccccCCccccccCCcc
Q 038592 155 VVSSVVLEKCVGDFAGEMLVEDVEIESEGGCRKREFRRRLRFKRMPNLVQTEVKLVPEAAISLDSVKIGGKVRFRPHIGV 234 (478)
Q Consensus 155 i~~r~vl~~~~S~~~g~~vVedv~~e~~~~~~~~~~~RrLiF~~~~~~vQSe~~l~~~~~~~~~~~~~~~~~~~~~d~~~ 234 (478)
+++.+++++.+|+|+...+++. ..+.+.+++ .+.+|+. . .|
T Consensus 62 ~~v~~vl~~~~s~~q~I~v~~~------------~~~g~~l~l--dg~~~~~-----~-----------------~d--- 102 (334)
T 1xj5_A 62 LKVEKVLFQGKSDYQDVIVFQS------------ATYGKVLVL--DGVIQLT-----E-----------------RD--- 102 (334)
T ss_dssp EEEEEEEEEEECSSCEEEEEEE------------SSSCEEEEE--TTEEEEE-----T-----------------TT---
T ss_pred EEeeeEEEEeecCCeEEEEEEc------------CCCCeEEEE--CCEeecC-----c-----------------Cc---
Confidence 6778999999999998878772 134444444 3678863 0 12
Q ss_pred cchhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC----CC
Q 038592 235 LVHVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL----ED 309 (478)
Q Consensus 235 L~~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~----~~ 309 (478)
.+.||++|++..++.. ..+.+||+||+|+|.++..|.++. ..+|++||+|+.++++|+++|.. ..
T Consensus 103 -e~~y~e~L~~l~l~~~---------~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~ 172 (334)
T 1xj5_A 103 -ECAYQEMITHLPLCSI---------PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE 172 (334)
T ss_dssp -HHHHHHHHHHHHHTTS---------SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGG
T ss_pred -chHHHHHHHHHHHhhC---------CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccC
Confidence 6889998776433222 136899999999999999999886 47999999999999999999842 13
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL 389 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl 389 (478)
+++++++++|+.+++... ...+||+|++|..... .++..++..+|+
T Consensus 173 ~~rv~~~~~D~~~~l~~~----------------------------~~~~fDlIi~d~~~p~------~~~~~l~~~~~l 218 (334)
T 1xj5_A 173 DPRVNLVIGDGVAFLKNA----------------------------AEGSYDAVIVDSSDPI------GPAKELFEKPFF 218 (334)
T ss_dssp STTEEEEESCHHHHHHTS----------------------------CTTCEEEEEECCCCTT------SGGGGGGSHHHH
T ss_pred CCcEEEEECCHHHHHHhc----------------------------cCCCccEEEECCCCcc------CcchhhhHHHHH
Confidence 579999999999998541 2467999999875432 134556789999
Q ss_pred HHHHHccCcCcEEEEEeCCC--CchHHHHHHHHHHHhcCccE---EEeeccc---ceEEEEEEcC
Q 038592 390 LAARLILSDFGIFVMNVIPP--NRSFYDMLIQEFRDVFQELY---EIDVGNE---ENFVLIATGL 446 (478)
Q Consensus 390 ~~~~~~L~~~Gilv~N~~~~--~~~~~~~v~~~l~~vF~~v~---~~~v~~~---~N~Vl~a~~~ 446 (478)
+.++++|+|||+++++..+. .....+.++++++++|+.+. ...+... .-..++|++.
T Consensus 219 ~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~~~~~~vP~y~~g~~gf~~as~~ 283 (334)
T 1xj5_A 219 QSVARALRPGGVVCTQAESLWLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCSTE 283 (334)
T ss_dssp HHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEECS
T ss_pred HHHHHhcCCCcEEEEecCCccccHHHHHHHHHHHHHhCccccceEEEeCCcccCCceEEEEcccC
Confidence 99999999999999985443 45556778899999999533 2233332 2345677764
No 17
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.28 E-value=3.2e-12 Score=128.00 Aligned_cols=143 Identities=16% Similarity=0.140 Sum_probs=100.3
Q ss_pred CCCeEEEEeCchhHHH-HHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 262 FRPKALCVGVGGGALV-SFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~-~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.+.+||.||+|.|.++ ..+.+.++.+|++||+||++++.|++.+.-..-++++++.+|+.++
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l----------------- 184 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI----------------- 184 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG-----------------
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC-----------------
Confidence 3679999999977654 4555556899999999999999999986311116899999999875
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchH-HHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSF-YDMLIQ 419 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~-~~~v~~ 419 (478)
++..||+|+++... + -...+++.+++.|+|||.++++.......+ +..+..
T Consensus 185 ---------------~d~~FDvV~~~a~~---------~----d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~ 236 (298)
T 3fpf_A 185 ---------------DGLEFDVLMVAALA---------E----PKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSD 236 (298)
T ss_dssp ---------------GGCCCSEEEECTTC---------S----CHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCT
T ss_pred ---------------CCCCcCEEEECCCc---------c----CHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCCh
Confidence 24579999995421 1 237899999999999999999775432221 111112
Q ss_pred HHHHhcCccEEE-eecccceEEEEEEcCCCC
Q 038592 420 EFRDVFQELYEI-DVGNEENFVLIATGLSIV 449 (478)
Q Consensus 420 ~l~~vF~~v~~~-~v~~~~N~Vl~a~~~~~~ 449 (478)
...+-|..+..+ +.++..|.|+++++....
T Consensus 237 ~~~~gf~~~~~~~p~~~v~N~vv~a~k~~~~ 267 (298)
T 3fpf_A 237 DDITGFRRAGVVLPSGKVNNTSVLVFKCPDK 267 (298)
T ss_dssp GGGTTEEEEEEECCCTTCCCEEEEEEECC--
T ss_pred hhhhhhhheeEECCCCCcCcEEEEEEccCCc
Confidence 234467655544 345557999999877653
No 18
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.23 E-value=4.1e-10 Score=106.03 Aligned_cols=106 Identities=21% Similarity=0.210 Sum_probs=86.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|.++.++.+.+ +.+|++||+++.+++.|++++... ..++++++++|+.+++......
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~--------- 129 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENE--------- 129 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT---------
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc---------
Confidence 5799999999999999998875 579999999999999999887422 2467999999999988764321
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++|.... ....+++.+.+.|+|||+++++-
T Consensus 130 ----------------~~~~fD~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 130 ----------------KYEPFDFIFIDADKQ-------------NNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp ----------------TCCCCSEEEECSCGG-------------GHHHHHHHHHHTCCTTCEEEEES
T ss_pred ----------------CCCCcCEEEEcCCcH-------------HHHHHHHHHHHhcCCCcEEEEeC
Confidence 225799999975311 23689999999999999999853
No 19
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.22 E-value=2.2e-11 Score=117.09 Aligned_cols=107 Identities=17% Similarity=0.032 Sum_probs=86.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++.++.++...++++||++|.|++.|++++.- ...+++++.+|+.+.+..
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~---------------- 123 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR-QTHKVIPLKGLWEDVAPT---------------- 123 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG-CSSEEEEEESCHHHHGGG----------------
T ss_pred CCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh-CCCceEEEeehHHhhccc----------------
Confidence 469999999999999999887667999999999999999998753 346789999999887643
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~ 404 (478)
..+..||.|+.|....... ..++ ....+++.++++|+|||+|++
T Consensus 124 ------------~~~~~FD~i~~D~~~~~~~------~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 124 ------------LPDGHFDGILYDTYPLSEE------TWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp ------------SCTTCEEEEEECCCCCBGG------GTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ------------ccccCCceEEEeeeecccc------hhhhcchhhhhhhhhheeCCCCEEEE
Confidence 2567899999987654321 1222 346789999999999999986
No 20
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.22 E-value=2.2e-11 Score=116.39 Aligned_cols=102 Identities=13% Similarity=0.236 Sum_probs=84.2
Q ss_pred CeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CC-CCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 264 PKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DG-EFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d-~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
.+||.||+|+|..+.++.+.+ +.+|++||+++.+++.|++++... .. ++++++++|+.+++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~------------ 125 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL------------ 125 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS------------
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh------------
Confidence 499999999999999998864 589999999999999999988532 23 58999999999987541
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE-Ee
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM-NV 406 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~-N~ 406 (478)
...+||+|++|.... ....+++.+.+.|+|||++++ |+
T Consensus 126 ----------------~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 126 ----------------ANDSYQLVFGQVSPM-------------DLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp ----------------CTTCEEEEEECCCTT-------------THHHHHHHHHHHEEEEEEEEETTT
T ss_pred ----------------cCCCcCeEEEcCcHH-------------HHHHHHHHHHHHcCCCcEEEEeCC
Confidence 256799999985322 126799999999999999998 44
No 21
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.18 E-value=1.4e-10 Score=112.66 Aligned_cols=107 Identities=12% Similarity=0.162 Sum_probs=85.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|+|..+.++.+.+ +.+|++||+++.+++.|++++... .+++++++++|+.+++.......
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~-------- 151 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDE-------- 151 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSG--------
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhcc--------
Confidence 6799999999999999998875 589999999999999999987422 24689999999999987642200
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....+||+|++|.+.. ....+++.+.++|+|||++++.
T Consensus 152 ---------------~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 152 ---------------KNHGSYDFIFVDADKD-------------NYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp ---------------GGTTCBSEEEECSCST-------------THHHHHHHHHHHBCTTCCEEEE
T ss_pred ---------------CCCCCEEEEEEcCchH-------------HHHHHHHHHHHhCCCCeEEEEe
Confidence 0146799999985421 2378999999999999999983
No 22
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.18 E-value=6.3e-11 Score=114.00 Aligned_cols=107 Identities=16% Similarity=0.173 Sum_probs=86.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|..+.++.+.+ +.+|++||+++.+++.|++++... ..++++++++|+.+++......
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~--------- 141 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQG--------- 141 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHS---------
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc---------
Confidence 6799999999999999998874 589999999999999999987421 2468999999999998764321
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.....+||+|++|.+.. ....+++.+.++|+|||++++.
T Consensus 142 --------------~~~~~~fD~I~~d~~~~-------------~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 142 --------------QESEGSYDFGFVDADKP-------------NYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp --------------TTCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred --------------cCCCCCcCEEEECCchH-------------HHHHHHHHHHHhcCCCeEEEEe
Confidence 00146799999985321 2378999999999999999983
No 23
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.18 E-value=5.7e-11 Score=109.88 Aligned_cols=157 Identities=14% Similarity=0.103 Sum_probs=88.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.+|+|+|.++..+.+.. +.++++||+++.+++.|++.+..... +++++++|+.+.+.....
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~------------ 97 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAE------------ 97 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHHHHHHHHH------------
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhh------------
Confidence 5799999999999999998876 57999999999999999988764333 789999999997654211
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCC-----------------hHHHHHHHHHccCcCcE-EE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFV-----------------RKDVLLAARLILSDFGI-FV 403 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~-----------------~~efl~~~~~~L~~~Gi-lv 403 (478)
...+||+|++|..-.... .+...+.... -..+++.+++.|+|||. ++
T Consensus 98 --------------~~~~fD~i~~npp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 98 --------------RGRPWHAIVSNPPYIPTG-EIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp --------------TTCCBSEEEECCCCCC-------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred --------------ccCcccEEEECCCCCCCc-cccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 346899999963211000 0000000100 07889999999999999 66
Q ss_pred EEeCCCCchHHHHHHHHHHHhcCccEEEeecccceEEEEEEcCC
Q 038592 404 MNVIPPNRSFYDMLIQEFRDVFQELYEIDVGNEENFVLIATGLS 447 (478)
Q Consensus 404 ~N~~~~~~~~~~~v~~~l~~vF~~v~~~~v~~~~N~Vl~a~~~~ 447 (478)
+.+.....+....++..++.-|..+.......+...++++.+..
T Consensus 163 ~~~~~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 163 LEVGHNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp EECTTSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred EEECCccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 66654443333333332234466555555444456777776543
No 24
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=1.9e-10 Score=111.24 Aligned_cols=104 Identities=23% Similarity=0.250 Sum_probs=84.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|..+..+.+.+ +.+|++||+++.+++.|++++... ..++++++++|+.+++...
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~------------ 131 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL------------ 131 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC------------
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc------------
Confidence 5799999999999999998875 579999999999999999987422 2358999999999987541
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....+||+|++|.... ....+++.+.+.|+|||+++++-
T Consensus 132 ---------------~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 132 ---------------GECPAFDLIFIDADKP-------------NNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ---------------CSCCCCSEEEECSCGG-------------GHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ---------------CCCCCeEEEEECCchH-------------HHHHHHHHHHHhcCCCeEEEEeC
Confidence 1235899999976311 23679999999999999999843
No 25
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.15 E-value=3.5e-10 Score=102.62 Aligned_cols=139 Identities=17% Similarity=0.202 Sum_probs=103.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCC--CeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGE--FLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~--rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|.++..+.+. +.+++++|+++.+++.|++.+....-+ +++++.+|..+.+
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------------- 115 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV---------------- 115 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc----------------
Confidence 569999999999999988887 789999999999999999887432222 5999999987652
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
...+||+|+++.. .. ...-....+++.+++.|+|||.+++...... ....+.+.
T Consensus 116 ---------------~~~~~D~v~~~~~-------~~--~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~ 169 (194)
T 1dus_A 116 ---------------KDRKYNKIITNPP-------IR--AGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ--GAKSLAKY 169 (194)
T ss_dssp ---------------TTSCEEEEEECCC-------ST--TCHHHHHHHHHHHHHHEEEEEEEEEEEESTH--HHHHHHHH
T ss_pred ---------------ccCCceEEEECCC-------cc--cchhHHHHHHHHHHHHcCCCCEEEEEECCCC--ChHHHHHH
Confidence 3457999999521 00 0001236899999999999999998887652 23457788
Q ss_pred HHHhcCccEEEeecccceEEEEEEc
Q 038592 421 FRDVFQELYEIDVGNEENFVLIATG 445 (478)
Q Consensus 421 l~~vF~~v~~~~v~~~~N~Vl~a~~ 445 (478)
+++.|..+..+...+ ...++.+.+
T Consensus 170 l~~~~~~~~~~~~~~-~~~~~~~~k 193 (194)
T 1dus_A 170 MKDVFGNVETVTIKG-GYRVLKSKK 193 (194)
T ss_dssp HHHHHSCCEEEEEET-TEEEEEEEC
T ss_pred HHHHhcceEEEecCC-cEEEEEEee
Confidence 888898877665333 456666653
No 26
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.15 E-value=1.3e-10 Score=111.09 Aligned_cols=100 Identities=20% Similarity=0.274 Sum_probs=83.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHH-HHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLE-KLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~-~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|.++.++.+.. +.+|++||+++.+++.|++++... ..++++++++|+.+++. .
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~------------- 138 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENV------------- 138 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHH-------------
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhh-------------
Confidence 5799999999999999998865 689999999999999999987432 23589999999998875 4
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
...+||+|++|.... ....+++.+.+.|+|||++++
T Consensus 139 ----------------~~~~fD~V~~~~~~~-------------~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 139 ----------------NDKVYDMIFIDAAKA-------------QSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp ----------------TTSCEEEEEEETTSS-------------SHHHHHHHHGGGEEEEEEEEE
T ss_pred ----------------ccCCccEEEEcCcHH-------------HHHHHHHHHHHhcCCCeEEEE
Confidence 246799999985321 236799999999999999998
No 27
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.14 E-value=4e-10 Score=103.71 Aligned_cols=107 Identities=16% Similarity=0.052 Sum_probs=85.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|+|.++..+......+|++||+|+.+++.|++.+....-++++++.+|+.++....
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~--------------- 109 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAG--------------- 109 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHC---------------
T ss_pred CCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhc---------------
Confidence 56999999999999987776545699999999999999998764222257999999999997541
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC---ChHHHHHHHHH--ccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF---VRKDVLLAARL--ILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f---~~~efl~~~~~--~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|. |-.. ...++++.+.+ .|+|||++++....+
T Consensus 110 -------------~~~~fD~i~~~~------------p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 110 -------------TTSPVDLVLADP------------PYNVDSADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp -------------CSSCCSEEEECC------------CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred -------------cCCCccEEEECC------------CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 356899999963 2222 24678999998 999999999977655
No 28
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.13 E-value=1e-10 Score=113.26 Aligned_cols=108 Identities=20% Similarity=0.289 Sum_probs=86.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|+|..+.++.+.. +.+|++||+++.+++.|++++... ..++++++++|+.+++.......
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~-------- 132 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEG-------- 132 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHH--------
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhcc--------
Confidence 6799999999999999999875 579999999999999999987422 24689999999999987643210
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE-EeC
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM-NVI 407 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~-N~~ 407 (478)
...+||+|++|.... ....+|+.+.+.|+|||++++ |+.
T Consensus 133 ----------------~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 133 ----------------GEHQFDFIFIDADKT-------------NYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp ----------------CSSCEEEEEEESCGG-------------GHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred ----------------CCCCEeEEEEcCChH-------------HhHHHHHHHHHhcCCCeEEEEECCc
Confidence 246799999986421 236799999999999999998 443
No 29
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.11 E-value=1.8e-10 Score=107.74 Aligned_cols=100 Identities=18% Similarity=0.206 Sum_probs=82.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|..+.++.+.. +.+|++||+++.+++.|++++... ..++++++.+|+.+++..
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------- 123 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG------------- 123 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTT-------------
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhcc-------------
Confidence 5799999999999999998875 579999999999999999887421 235799999999988632
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
... ||+|++|.... ....+++.+++.|+|||++++.
T Consensus 124 ----------------~~~-fD~v~~~~~~~-------------~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 124 ----------------QRD-IDILFMDCDVF-------------NGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp ----------------CCS-EEEEEEETTTS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ----------------CCC-CCEEEEcCChh-------------hhHHHHHHHHHhcCCCeEEEEE
Confidence 235 99999984321 2478999999999999999983
No 30
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.10 E-value=3.5e-10 Score=106.48 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=84.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|..+.++.+.+ +.+|++||+++.+++.|++.+... ..++++++++|+.+++......
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~--------- 135 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHA--------- 135 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTT---------
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhc---------
Confidence 5799999999999999998875 579999999999999999987422 2467999999999988663210
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....+||+|++|.... ....+++.+++.|+|||++++.
T Consensus 136 ---------------~~~~~fD~v~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 173 (225)
T 3tr6_A 136 ---------------GQAWQYDLIYIDADKA-------------NTDLYYEESLKLLREGGLIAVD 173 (225)
T ss_dssp ---------------TCTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------cCCCCccEEEECCCHH-------------HHHHHHHHHHHhcCCCcEEEEe
Confidence 0126799999975311 2367999999999999999984
No 31
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.08 E-value=6.4e-10 Score=104.99 Aligned_cols=106 Identities=25% Similarity=0.224 Sum_probs=84.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|.++..+.+.+ +.+|++||+++.+++.|++++... ..++++++.+|+.+++.+....
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~--------- 140 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAA--------- 140 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHT---------
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhc---------
Confidence 5799999999999999998875 579999999999999999987422 2468999999999988764320
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....+||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 141 ---------------~~~~~~D~v~~d~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 141 ---------------GEAGTFDVAVVDADKE-------------NCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp ---------------TCTTCEEEEEECSCST-------------THHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------CCCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 0125799999975311 2368999999999999999983
No 32
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.07 E-value=5.7e-10 Score=106.72 Aligned_cols=105 Identities=23% Similarity=0.321 Sum_probs=85.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|..+.++...+ +.+|++||+++..++.|++++... ..++++++++|+.+++.+...
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~---------- 142 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQ---------- 142 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHT----------
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHh----------
Confidence 5799999999999999998875 479999999999999999987321 235799999999998876431
Q ss_pred CcccccCCCccCCCCCCC--CceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 340 GACSLKDGNFLDNSDRVD--NKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~--~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
.+ ..||+|++|.... ....+++.+.+.|+|||++++.-
T Consensus 143 ----------------~~~~~~fD~V~~d~~~~-------------~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 143 ----------------GKPLPEFDLIFIDADKR-------------NYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp ----------------SSSCCCEEEEEECSCGG-------------GHHHHHHHHHHTEEEEEEEEEEC
T ss_pred ----------------cCCCCCcCEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEeC
Confidence 12 6799999985311 23679999999999999999853
No 33
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.07 E-value=3.3e-10 Score=107.08 Aligned_cols=109 Identities=11% Similarity=0.133 Sum_probs=81.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|.++.++.+.+ +.+|++||++|.+++.|++++... ..++++++++|+.+++.....
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~---------- 128 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKK---------- 128 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTT----------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHH----------
Confidence 5799999999999999998864 579999999999999999976421 245799999999998754210
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
.....+||+|++|..... ..-..++++.+ +.|+|||++++.-
T Consensus 129 --------------~~~~~~fD~V~~d~~~~~----------~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 129 --------------KYDVDTLDMVFLDHWKDR----------YLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp --------------TSCCCCCSEEEECSCGGG----------HHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred --------------hcCCCceEEEEEcCCccc----------chHHHHHHHhc-cccCCCeEEEEeC
Confidence 001267999999753211 01123567777 9999999999843
No 34
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.04 E-value=4.4e-09 Score=100.55 Aligned_cols=116 Identities=19% Similarity=0.213 Sum_probs=84.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|.++..+.+.. +.+|++||+++.+++.|++++... ..++++++.+|+.+++.+..... ..+
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~--~~~--- 135 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSK--SAP--- 135 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCS--SCC---
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhc--ccc---
Confidence 5799999999999999998875 579999999999999999987421 23579999999999876532100 000
Q ss_pred CcccccCCCccCCCCCCC--CceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 340 GACSLKDGNFLDNSDRVD--NKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~--~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
.-.+.... .+||+|++|.... .-..+++.+.+.|+|||++++..
T Consensus 136 ----------~~~~~f~~~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 ----------SWASDFAFGPSSIDLFFLDADKE-------------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp ----------GGGTTTCCSTTCEEEEEECSCGG-------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ----------cccccccCCCCCcCEEEEeCCHH-------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 00000112 6799999974211 12589999999999999999854
No 35
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.03 E-value=1.3e-09 Score=102.95 Aligned_cols=155 Identities=15% Similarity=0.097 Sum_probs=101.8
Q ss_pred CCeEEEEeCc-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVG-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlG-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+| +|.++..+.+..+.+|++||+++.+++.|++.+....- +++++.+|+..+. .
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~-~--------------- 118 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIK-G--------------- 118 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSST-T---------------
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhh-h---------------
Confidence 5799999999 99999988877678999999999999999987643222 7899999974321 0
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCC-CCCCCCCC-------CC-CChHHHHHHHHHccCcCcEEEEEeCCCCch
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDA-RNGTSAPP-------VE-FVRKDVLLAARLILSDFGIFVMNVIPPNRS 412 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~-~~g~s~Pp-------~~-f~~~efl~~~~~~L~~~Gilv~N~~~~~~~ 412 (478)
..+.+||+|++|..-... ......|- .. -.-..+++.+.+.|+|||.+++.+... ..
T Consensus 119 -------------~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-~~ 184 (230)
T 3evz_A 119 -------------VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-EK 184 (230)
T ss_dssp -------------TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-HH
T ss_pred -------------cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-Hh
Confidence 134789999996311000 00000000 00 012789999999999999999876554 23
Q ss_pred HHHHHHHHHHHhcCccEEEee--cccceEEEEEEcCCC
Q 038592 413 FYDMLIQEFRDVFQELYEIDV--GNEENFVLIATGLSI 448 (478)
Q Consensus 413 ~~~~v~~~l~~vF~~v~~~~v--~~~~N~Vl~a~~~~~ 448 (478)
....+.+.+++..-.+..+.. +.....++..++.+.
T Consensus 185 ~~~~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~~~~~ 222 (230)
T 3evz_A 185 LLNVIKERGIKLGYSVKDIKFKVGTRWRHSLIFFKGIS 222 (230)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCCC-CEEEEEEECCC-
T ss_pred HHHHHHHHHHHcCCceEEEEecCCCeEEEEEEEecccc
Confidence 355667777766334444433 445567777676553
No 36
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.03 E-value=1.1e-09 Score=104.29 Aligned_cols=130 Identities=18% Similarity=0.192 Sum_probs=94.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|+|.++..+.+.. +.+|++||+++.+++.|++......-++++++.+|+.+++...
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~-------------- 100 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKM-------------- 100 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHH--------------
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH--------------
Confidence 5799999999999998888765 6899999999999999998753222346999999999987652
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
..+..||.|++...+..+.. ......+..++|++.+++.|+|||+|++-.. .....+.+...+
T Consensus 101 -------------~~~~~~d~v~~~~~~p~~~~--~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td--~~~~~~~~~~~~ 163 (218)
T 3dxy_A 101 -------------IPDNSLRMVQLFFPDPWHKA--RHNKRRIVQVPFAELVKSKLQLGGVFHMATD--WEPYAEHMLEVM 163 (218)
T ss_dssp -------------SCTTCEEEEEEESCCCCCSG--GGGGGSSCSHHHHHHHHHHEEEEEEEEEEES--CHHHHHHHHHHH
T ss_pred -------------cCCCChheEEEeCCCCccch--hhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC--CHHHHHHHHHHH
Confidence 14568999998532221110 0011234567899999999999999987553 334445555555
Q ss_pred HH
Q 038592 422 RD 423 (478)
Q Consensus 422 ~~ 423 (478)
.+
T Consensus 164 ~~ 165 (218)
T 3dxy_A 164 SS 165 (218)
T ss_dssp HT
T ss_pred Hh
Confidence 54
No 37
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.02 E-value=1.2e-09 Score=106.48 Aligned_cols=155 Identities=19% Similarity=0.180 Sum_probs=103.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC---CC-CCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL---ED-GEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~---~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.+|+|.|.++..+.+.. ..+|++||+++.+++.|++.+.. .. .++++++.+|..++..+....
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~------- 109 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEA------- 109 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHT-------
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhh-------
Confidence 4699999999999999998886 57999999999999999998764 32 347999999998875432110
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC---------CCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV---------EFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~---------~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
.....+||+|+++.--.... +..+|.. ...-..+++.+.++|+|||.|++-...
T Consensus 110 ----------------~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 110 ----------------GLPDEHFHHVIMNPPYNDAG-DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp ----------------TCCTTCEEEEEECCCC----------------------CCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ----------------ccCCCCcCEEEECCCCcCCC-CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 01356799999962100000 0000000 012468999999999999999975432
Q ss_pred CCchHHHHHHHHHHHhcCccEEEee----cccceEEEEEE
Q 038592 409 PNRSFYDMLIQEFRDVFQELYEIDV----GNEENFVLIAT 444 (478)
Q Consensus 409 ~~~~~~~~v~~~l~~vF~~v~~~~v----~~~~N~Vl~a~ 444 (478)
. ....++..+++.|..+....+ +...+.+|+..
T Consensus 173 ~---~~~~~~~~l~~~~~~~~i~~v~~~~~~~~~~~lv~~ 209 (260)
T 2ozv_A 173 Q---SVAEIIAACGSRFGGLEITLIHPRPGEDAVRMLVTA 209 (260)
T ss_dssp G---GHHHHHHHHTTTEEEEEEEEEESSTTSCCCEEEEEE
T ss_pred H---HHHHHHHHHHhcCCceEEEEEcCCCCCCceEEEEEE
Confidence 2 244567777766664433332 34567777764
No 38
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.02 E-value=1e-09 Score=99.41 Aligned_cols=106 Identities=15% Similarity=0.108 Sum_probs=84.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+....+|++||+++.+++.|++.+.... .++++++.+|+.+++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--------------- 96 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDC--------------- 96 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHH---------------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHh---------------
Confidence 56999999999999988887744799999999999999998875332 35799999999998754
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCC-CChHHHHHHHH--HccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVE-FVRKDVLLAAR--LILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~-f~~~efl~~~~--~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|. |-. ....++++.+. +.|+|||++++.....
T Consensus 97 --------------~~~~fD~i~~~~------------~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 97 --------------LTGRFDLVFLDP------------PYAKETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp --------------BCSCEEEEEECC------------SSHHHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred --------------hcCCCCEEEECC------------CCCcchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 235699999962 210 12367788887 8999999999987665
No 39
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.99 E-value=7.8e-10 Score=105.43 Aligned_cols=107 Identities=17% Similarity=0.035 Sum_probs=81.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|+|.++..+.+....+|++||+++.+++.|++.+... ..+++++.+|+.+++..
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~---------------- 123 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ-THKVIPLKGLWEDVAPT---------------- 123 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC-SSEEEEEESCHHHHGGG----------------
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc-CCCeEEEecCHHHhhcc----------------
Confidence 4699999999999999997654459999999999999999987532 26799999999987532
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~ 404 (478)
..+.+||+|++|.+.. .. +..+. .-..+++.+++.|+|||.|++
T Consensus 124 ------------~~~~~fD~V~~d~~~~-~~-----~~~~~~~~~~~l~~~~r~LkpgG~l~~ 168 (236)
T 1zx0_A 124 ------------LPDGHFDGILYDTYPL-SE-----ETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp ------------SCTTCEEEEEECCCCC-BG-----GGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred ------------cCCCceEEEEECCccc-ch-----hhhhhhhHHHHHHHHHHhcCCCeEEEE
Confidence 1456899999975442 11 11111 123679999999999999985
No 40
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.98 E-value=1.3e-09 Score=98.91 Aligned_cols=110 Identities=19% Similarity=0.163 Sum_probs=84.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+....+|++||+++.+++.|++.+.... .++++++.+|+.+++.....
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------------ 112 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYE------------ 112 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHH------------
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHh------------
Confidence 56999999999999988777545799999999999999998764321 35799999999998754321
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHH--HHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAA--RLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~--~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|.. . ..-....+++.+ .+.|+|||++++.....
T Consensus 113 --------------~~~~fD~i~~~~~--~---------~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 113 --------------EKLQFDLVLLDPP--Y---------AKQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp --------------TTCCEEEEEECCC--G---------GGCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred --------------cCCCCCEEEECCC--C---------CchhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2567999999631 0 011346777877 78899999999877654
No 41
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.96 E-value=4.8e-09 Score=94.46 Aligned_cols=122 Identities=16% Similarity=0.059 Sum_probs=89.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|.++..+.+.. +.+|+++|+++.+++.|++.+.... ..++ ++.+|+.+.+..
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~-------------- 90 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDD-------------- 90 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGG--------------
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhc--------------
Confidence 4699999999999999988875 6899999999999999998764322 3378 888998765422
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
...+||+|+++.. + ....+++.+++.|+|||.+++....... ...+...
T Consensus 91 ---------------~~~~~D~i~~~~~-------~-------~~~~~l~~~~~~L~~gG~l~~~~~~~~~--~~~~~~~ 139 (178)
T 3hm2_A 91 ---------------VPDNPDVIFIGGG-------L-------TAPGVFAAAWKRLPVGGRLVANAVTVES--EQMLWAL 139 (178)
T ss_dssp ---------------CCSCCSEEEECC--------T-------TCTTHHHHHHHTCCTTCEEEEEECSHHH--HHHHHHH
T ss_pred ---------------cCCCCCEEEECCc-------c-------cHHHHHHHHHHhcCCCCEEEEEeecccc--HHHHHHH
Confidence 2367999998421 0 1167999999999999999988765522 2344555
Q ss_pred HHHhcCccEE
Q 038592 421 FRDVFQELYE 430 (478)
Q Consensus 421 l~~vF~~v~~ 430 (478)
+++....+..
T Consensus 140 ~~~~~~~~~~ 149 (178)
T 3hm2_A 140 RKQFGGTISS 149 (178)
T ss_dssp HHHHCCEEEE
T ss_pred HHHcCCeeEE
Confidence 5555444433
No 42
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.95 E-value=1.7e-09 Score=102.75 Aligned_cols=103 Identities=20% Similarity=0.255 Sum_probs=84.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+||.||+|.|.++..+.+.. +.+|++||+++.+++.|++.+... ..++++++.+|+.+++....
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~------------ 122 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLE------------ 122 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHT------------
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcc------------
Confidence 5699999999999999998876 689999999999999999987421 23579999999998765420
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....||+|++|.... ....+++.+.+.|+|||++++.
T Consensus 123 ---------------~~~~fD~I~~~~~~~-------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 123 ---------------LYPLFDVLFIDAAKG-------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp ---------------TSCCEEEEEEEGGGS-------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ---------------cCCCccEEEECCCHH-------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 145799999975321 3478999999999999999986
No 43
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.95 E-value=1.2e-08 Score=92.21 Aligned_cols=117 Identities=19% Similarity=0.177 Sum_probs=90.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+.. .+|+++|+++.+++.|++.+... ..++++++.+|..+.+.
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---------------- 96 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC---------------- 96 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT----------------
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc----------------
Confidence 5699999999999999888776 89999999999999999876422 23689999999988542
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
...+||+|+++... . .-..+++.+++.|+|||.+++..... .....+.+.+
T Consensus 97 --------------~~~~~D~v~~~~~~-----------~--~~~~~l~~~~~~l~~gG~l~~~~~~~--~~~~~~~~~l 147 (192)
T 1l3i_A 97 --------------KIPDIDIAVVGGSG-----------G--ELQEILRIIKDKLKPGGRIIVTAILL--ETKFEAMECL 147 (192)
T ss_dssp --------------TSCCEEEEEESCCT-----------T--CHHHHHHHHHHTEEEEEEEEEEECBH--HHHHHHHHHH
T ss_pred --------------cCCCCCEEEECCch-----------H--HHHHHHHHHHHhcCCCcEEEEEecCc--chHHHHHHHH
Confidence 12479999985211 1 13789999999999999999877643 3345566677
Q ss_pred HHh-c
Q 038592 422 RDV-F 425 (478)
Q Consensus 422 ~~v-F 425 (478)
++. |
T Consensus 148 ~~~g~ 152 (192)
T 1l3i_A 148 RDLGF 152 (192)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 765 6
No 44
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.94 E-value=3.8e-09 Score=107.17 Aligned_cols=132 Identities=18% Similarity=0.146 Sum_probs=90.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC--CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE--DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~--~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|+|.++..+... +.+|++||+++.+++.|++.+... .+.+++++.+|+.+++.....
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~-ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~----------- 221 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAA-GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREER----------- 221 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHH-----------
T ss_pred CCcEEEcccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHh-----------
Confidence 569999999999999888875 459999999999999999886432 123699999999999865322
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-----ChHHHHHHHHHccCcCcEEEEEeCCCCchHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-----VRKDVLLAARLILSDFGIFVMNVIPPNRSFYD 415 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-----~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~ 415 (478)
...+||+|++|...- +.+ +.... .-.++++.+.++|+|||++++...+....-..
T Consensus 222 ---------------~~~~fD~Ii~dPP~~----~~~-~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~ 281 (332)
T 2igt_A 222 ---------------RGSTYDIILTDPPKF----GRG-THGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFY 281 (332)
T ss_dssp ---------------HTCCBSEEEECCCSE----EEC-TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHH
T ss_pred ---------------cCCCceEEEECCccc----cCC-chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHH
Confidence 246799999974210 000 00000 12578999999999999976654443221123
Q ss_pred HHHHHHHHhcC
Q 038592 416 MLIQEFRDVFQ 426 (478)
Q Consensus 416 ~v~~~l~~vF~ 426 (478)
.+.+.+++.+.
T Consensus 282 ~~~~~l~~a~~ 292 (332)
T 2igt_A 282 SMHELMRETMR 292 (332)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHH
Confidence 34445555554
No 45
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.94 E-value=2.7e-09 Score=103.43 Aligned_cols=151 Identities=17% Similarity=0.150 Sum_probs=98.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+....+|++||+++.+++.|++.+... ..++++++.+|+.++...
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~--------------- 114 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL--------------- 114 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT---------------
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh---------------
Confidence 5799999999999999998876569999999999999999887532 245899999999887422
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCC-CCCCCCCCCC---------CChHHHHHHHHHccCcCcEEEEEeCCCCc
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDA-RNGTSAPPVE---------FVRKDVLLAARLILSDFGIFVMNVIPPNR 411 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~-~~g~s~Pp~~---------f~~~efl~~~~~~L~~~Gilv~N~~~~~~ 411 (478)
....+||+|++|.---.. ..+..+|... ..-..+++.+.+.|+|||.+++-....
T Consensus 115 -------------~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-- 179 (259)
T 3lpm_A 115 -------------IPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPE-- 179 (259)
T ss_dssp -------------SCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTT--
T ss_pred -------------hccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHH--
Confidence 135789999996311000 0011111100 012579999999999999999843222
Q ss_pred hHHHHHHHHHHHh-cCccEEEee----cccceEEEEEE
Q 038592 412 SFYDMLIQEFRDV-FQELYEIDV----GNEENFVLIAT 444 (478)
Q Consensus 412 ~~~~~v~~~l~~v-F~~v~~~~v----~~~~N~Vl~a~ 444 (478)
....+...+++. |.......+ +...+.+++..
T Consensus 180 -~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 216 (259)
T 3lpm_A 180 -RLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEG 216 (259)
T ss_dssp -THHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEE
T ss_pred -HHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEE
Confidence 234456666653 332221111 34557777753
No 46
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.94 E-value=4.3e-09 Score=100.79 Aligned_cols=120 Identities=12% Similarity=0.034 Sum_probs=87.2
Q ss_pred CCeEEEEeCchhHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|+|.++..+... ++.+|++||+++.+++.|++.+....-++++++.+|+.++...
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~--------------- 135 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR--------------- 135 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC---------------
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc---------------
Confidence 579999999999988888875 4689999999999999999865321123599999999876310
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
.....+||+|+++... --..+++.+++.|+|||.+++.......+....+.+.+
T Consensus 136 ------------~~~~~~fD~V~~~~~~--------------~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l 189 (240)
T 1xdz_A 136 ------------KDVRESYDIVTARAVA--------------RLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAI 189 (240)
T ss_dssp ------------TTTTTCEEEEEEECCS--------------CHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHH
T ss_pred ------------ccccCCccEEEEeccC--------------CHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHH
Confidence 0024679999996421 13789999999999999999865444333344445555
Q ss_pred HH
Q 038592 422 RD 423 (478)
Q Consensus 422 ~~ 423 (478)
++
T Consensus 190 ~~ 191 (240)
T 1xdz_A 190 TT 191 (240)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 47
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.93 E-value=2.4e-09 Score=100.21 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=80.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+......+|++||+++.+++.|++.+....-++++++.+|+.+++..
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~---------------- 118 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQ---------------- 118 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSS----------------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhh----------------
Confidence 4699999999999998766554459999999999999999876422225899999999998632
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHH--ccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARL--ILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~--~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|.. . ..-...++++.+.+ .|+|||++++.....
T Consensus 119 -------------~~~~fD~V~~~~p---~--------~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 119 -------------KGTPHNIVFVDPP---F--------RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp -------------CCCCEEEEEECCS---S--------STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred -------------cCCCCCEEEECCC---C--------CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3467999999631 0 00134678888876 499999999866543
No 48
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.93 E-value=3.1e-09 Score=94.94 Aligned_cols=107 Identities=17% Similarity=0.109 Sum_probs=82.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+. +.+|++||+++.+++.|++.+....- +++++.+|+.+++.....
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~------------- 106 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE-GWEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKA------------- 106 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT-TCEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHH-------------
T ss_pred CCeEEEeCCCcCHHHHHHHHC-CCeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhc-------------
Confidence 469999999999999888876 34599999999999999987643222 799999999998755321
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHH--HccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAAR--LILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~--~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|.--. -...++++.+. +.|+|||++++.....
T Consensus 107 -------------~~~~~D~i~~~~~~~------------~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 107 -------------QGERFTVAFMAPPYA------------MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp -------------TTCCEEEEEECCCTT------------SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred -------------cCCceEEEEECCCCc------------hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 245799999963110 12246777777 9999999999887665
No 49
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.93 E-value=7.5e-09 Score=97.20 Aligned_cols=114 Identities=11% Similarity=-0.021 Sum_probs=87.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+.... ..+++++.+|+.+.+.
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~---------------- 118 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA---------------- 118 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT----------------
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc----------------
Confidence 569999999999999998887 8899999999999999998753211 2379999999988542
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
....||+|+++. + +... +++.+.+.|+|||.+++..... +....+...+
T Consensus 119 --------------~~~~~D~v~~~~--~------------~~~~-~l~~~~~~LkpgG~lv~~~~~~--~~~~~~~~~l 167 (204)
T 3njr_A 119 --------------DLPLPEAVFIGG--G------------GSQA-LYDRLWEWLAPGTRIVANAVTL--ESETLLTQLH 167 (204)
T ss_dssp --------------TSCCCSEEEECS--C------------CCHH-HHHHHHHHSCTTCEEEEEECSH--HHHHHHHHHH
T ss_pred --------------cCCCCCEEEECC--c------------ccHH-HHHHHHHhcCCCcEEEEEecCc--ccHHHHHHHH
Confidence 234699999853 1 1224 9999999999999999887754 2344455566
Q ss_pred HHh
Q 038592 422 RDV 424 (478)
Q Consensus 422 ~~v 424 (478)
++.
T Consensus 168 ~~~ 170 (204)
T 3njr_A 168 ARH 170 (204)
T ss_dssp HHH
T ss_pred HhC
Confidence 655
No 50
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.93 E-value=9.1e-09 Score=100.82 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=78.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC---CCEEEEEECChHHHHHHHHhcCC-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL---DFEVVGVEMDEVVLRVARQYFGL-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~---~~~V~~VEiDp~Vl~vA~~~Fg~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+||.||||+|.++..|.+.. +.+|++||++|.|++.|++.+.- ....+++++++|..++
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~--------------- 135 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI--------------- 135 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC---------------
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc---------------
Confidence 4699999999999998888764 47999999999999999988642 2356899999998654
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
+.+.||+|++-. . . ...|+. ....+|+.+++.|+|||+|++-
T Consensus 136 -----------------~~~~~d~v~~~~--~--l--~~~~~~--~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 136 -----------------AIENASMVVLNF--T--L--QFLEPS--ERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp -----------------CCCSEEEEEEES--C--G--GGSCHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------cccccccceeee--e--e--eecCch--hHhHHHHHHHHHcCCCcEEEEE
Confidence 345699998831 0 0 001111 1246899999999999999873
No 51
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.92 E-value=2e-09 Score=100.04 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=89.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.. ..+|++||+++.+++.|++.+....-++++++.+|+.+.+.
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~---------------- 104 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD---------------- 104 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT----------------
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh----------------
Confidence 5699999999999999998875 58999999999999999987632222679999999876532
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
....||+|+++.... .-..+++.+.+.|+|||.+++..... .....+.+.+
T Consensus 105 --------------~~~~~D~i~~~~~~~-------------~~~~~l~~~~~~LkpgG~l~~~~~~~--~~~~~~~~~l 155 (204)
T 3e05_A 105 --------------DLPDPDRVFIGGSGG-------------MLEEIIDAVDRRLKSEGVIVLNAVTL--DTLTKAVEFL 155 (204)
T ss_dssp --------------TSCCCSEEEESCCTT-------------CHHHHHHHHHHHCCTTCEEEEEECBH--HHHHHHHHHH
T ss_pred --------------cCCCCCEEEECCCCc-------------CHHHHHHHHHHhcCCCeEEEEEeccc--ccHHHHHHHH
Confidence 235699999963211 34789999999999999999876554 2234455556
Q ss_pred HHh
Q 038592 422 RDV 424 (478)
Q Consensus 422 ~~v 424 (478)
++.
T Consensus 156 ~~~ 158 (204)
T 3e05_A 156 EDH 158 (204)
T ss_dssp HHT
T ss_pred HHC
Confidence 554
No 52
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.92 E-value=6.1e-09 Score=98.38 Aligned_cols=130 Identities=15% Similarity=0.214 Sum_probs=91.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..|.+.. +.+|++||+++.+++.|++......-++++++.+|+.++...
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~--------------- 103 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDV--------------- 103 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHH---------------
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh---------------
Confidence 5689999999999999888875 689999999999999999875322225799999999884321
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
.....||.|++...+....... -...+....+++.+++.|+|||.+++-.. .......+...+
T Consensus 104 -------------~~~~~~d~v~~~~~~p~~~~~~--~~~rl~~~~~l~~~~~~LkpgG~l~~~td--~~~~~~~~~~~~ 166 (213)
T 2fca_A 104 -------------FEPGEVKRVYLNFSDPWPKKRH--EKRRLTYSHFLKKYEEVMGKGGSIHFKTD--NRGLFEYSLKSF 166 (213)
T ss_dssp -------------CCTTSCCEEEEESCCCCCSGGG--GGGSTTSHHHHHHHHHHHTTSCEEEEEES--CHHHHHHHHHHH
T ss_pred -------------cCcCCcCEEEEECCCCCcCccc--cccccCcHHHHHHHHHHcCCCCEEEEEeC--CHHHHHHHHHHH
Confidence 1345799999854222110000 01124468999999999999999997653 334445555556
Q ss_pred HHh
Q 038592 422 RDV 424 (478)
Q Consensus 422 ~~v 424 (478)
.+.
T Consensus 167 ~~~ 169 (213)
T 2fca_A 167 SEY 169 (213)
T ss_dssp HHH
T ss_pred HHC
Confidence 554
No 53
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.90 E-value=5.7e-09 Score=97.91 Aligned_cols=130 Identities=19% Similarity=0.246 Sum_probs=90.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.. +.++++||+++.+++.|++.+....-++++++.+|+.++...
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~--------------- 106 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY--------------- 106 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---------------
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh---------------
Confidence 5689999999999998888875 689999999999999999876321125799999999874211
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
.....||+|+++........ .--+..+....+++.+++.|+|||.+++... .......+.+.+
T Consensus 107 -------------~~~~~~D~i~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~ 169 (214)
T 1yzh_A 107 -------------FEDGEIDRLYLNFSDPWPKK--RHEKRRLTYKTFLDTFKRILPENGEIHFKTD--NRGLFEYSLVSF 169 (214)
T ss_dssp -------------SCTTCCSEEEEESCCCCCSG--GGGGGSTTSHHHHHHHHHHSCTTCEEEEEES--CHHHHHHHHHHH
T ss_pred -------------cCCCCCCEEEEECCCCcccc--chhhhccCCHHHHHHHHHHcCCCcEEEEEeC--CHHHHHHHHHHH
Confidence 13457999999742211000 0000123457899999999999999998653 234444555555
Q ss_pred HHh
Q 038592 422 RDV 424 (478)
Q Consensus 422 ~~v 424 (478)
.+.
T Consensus 170 ~~~ 172 (214)
T 1yzh_A 170 SQY 172 (214)
T ss_dssp HHH
T ss_pred HHC
Confidence 543
No 54
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.90 E-value=2.4e-09 Score=100.17 Aligned_cols=108 Identities=16% Similarity=0.126 Sum_probs=80.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCC--CCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDG--EFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d--~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|.++..+......+|++||+|+.+++.|++.+....- ++++++.+|+.+++..
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~-------------- 119 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ-------------- 119 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS--------------
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh--------------
Confidence 469999999999999876655446999999999999999987643221 5899999999987521
Q ss_pred cccccCCCccCCCCCCCCc-eeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHH--HHccCcCcEEEEEeCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNK-FDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAA--RLILSDFGIFVMNVIPP 409 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~-yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~--~~~L~~~Gilv~N~~~~ 409 (478)
....+ ||+|++|.. . ..-...++++.+ .+.|+|||++++...+.
T Consensus 120 --------------~~~~~~fD~I~~~~~--~---------~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 120 --------------PQNQPHFDVVFLDPP--F---------HFNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp --------------CCSSCCEEEEEECCC--S---------SSCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred --------------hccCCCCCEEEECCC--C---------CCccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 02467 999999631 0 001236788888 55799999999876554
No 55
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.89 E-value=4.5e-09 Score=97.58 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=94.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+....+|++||+++.+++.|++.+....-++++++.+|..++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------------------- 121 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD------------------- 121 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT-------------------
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc-------------------
Confidence 5799999999999999988765569999999999999999886532223399999998654
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
...+||+|+.+. +.+ .-..+++.+++.|+|||.+++...... ....+.+.++
T Consensus 122 -------------~~~~fD~i~~~~------------~~~-~~~~~l~~~~~~L~~gG~l~~~~~~~~--~~~~~~~~~~ 173 (205)
T 3grz_A 122 -------------VDGKFDLIVANI------------LAE-ILLDLIPQLDSHLNEDGQVIFSGIDYL--QLPKIEQALA 173 (205)
T ss_dssp -------------CCSCEEEEEEES------------CHH-HHHHHGGGSGGGEEEEEEEEEEEEEGG--GHHHHHHHHH
T ss_pred -------------CCCCceEEEECC------------cHH-HHHHHHHHHHHhcCCCCEEEEEecCcc--cHHHHHHHHH
Confidence 346799999963 111 126789999999999999998644332 2334455555
Q ss_pred Hh-cCccEEEeecccceEEEEEEcCC
Q 038592 423 DV-FQELYEIDVGNEENFVLIATGLS 447 (478)
Q Consensus 423 ~v-F~~v~~~~v~~~~N~Vl~a~~~~ 447 (478)
+. |..+.. ....++..+.++.+
T Consensus 174 ~~Gf~~~~~---~~~~~w~~~~~~~~ 196 (205)
T 3grz_A 174 ENSFQIDLK---MRAGRWIGLAISRK 196 (205)
T ss_dssp HTTEEEEEE---EEETTEEEEEEEEC
T ss_pred HcCCceEEe---eccCCEEEEEEecc
Confidence 44 443322 22334555555444
No 56
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.88 E-value=5.8e-09 Score=95.12 Aligned_cols=115 Identities=12% Similarity=0.048 Sum_probs=80.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+. +.+|++||+++.+++.|++.+....-++++++.+|...+. .
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~-~---------------- 84 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD-H---------------- 84 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG-G----------------
T ss_pred CCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH-h----------------
Confidence 469999999999999999887 8899999999999999998763211267999997765431 1
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCC-CCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDS-GDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s-~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++++.. ......+.. ..-....+++.+.+.|+|||.+++-+.+.
T Consensus 85 ------------~~~~~fD~v~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 85 ------------YVREPIRAAIFNLGYLPSADKSVIT--KPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ------------TCCSCEEEEEEEEC-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred ------------hccCCcCEEEEeCCCCCCcchhccc--ChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 135679999987411 000000000 00123578899999999999999877654
No 57
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.87 E-value=1.7e-08 Score=104.29 Aligned_cols=136 Identities=13% Similarity=0.098 Sum_probs=94.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CC-CeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GE-FLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~-rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|+|+++..+......+|++||+++.+++.|++.+.... ++ +++++.+|+.+++.....
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~----------- 281 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARR----------- 281 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHH-----------
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHH-----------
Confidence 46999999999999998887533599999999999999998874332 23 799999999999876432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
.+.+||+|++|........+. -+..+ .-.+++..+.+.|+|||++++...+.... .+...+
T Consensus 282 ---------------~~~~fD~Ii~DPP~~~~~~~~--~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~ 343 (385)
T 2b78_A 282 ---------------HHLTYDIIIIDPPSFARNKKE--VFSVSKDYHKLIRQGLEILSENGLIIASTNAANMT-VSQFKK 343 (385)
T ss_dssp ---------------TTCCEEEEEECCCCC-----C--CCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-HHHHHH
T ss_pred ---------------hCCCccEEEECCCCCCCChhh--HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HHHHHH
Confidence 345799999985321000000 01100 11357788899999999999877665432 344455
Q ss_pred HHHHhcCc
Q 038592 420 EFRDVFQE 427 (478)
Q Consensus 420 ~l~~vF~~ 427 (478)
.+++.+..
T Consensus 344 ~i~~~~~~ 351 (385)
T 2b78_A 344 QIEKGFGK 351 (385)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 56665543
No 58
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.87 E-value=2.5e-08 Score=94.79 Aligned_cols=143 Identities=17% Similarity=0.177 Sum_probs=96.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..|.+.. ..+|++||+++.+++.|++..... ++++++.+|+.+.....
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~-------------- 138 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYA-------------- 138 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGT--------------
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCccccc--------------
Confidence 4689999999999999999885 479999999999999999886532 78999999987521100
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC----CCc---hHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP----PNR---SFY 414 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~----~~~---~~~ 414 (478)
.....||+|+.|+... . ....+++.+.+.|+|||.+++-+.. ... .+.
T Consensus 139 -------------~~~~~~D~v~~~~~~~----------~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~ 193 (230)
T 1fbn_A 139 -------------NIVEKVDVIYEDVAQP----------N--QAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIF 193 (230)
T ss_dssp -------------TTSCCEEEEEECCCST----------T--HHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHH
T ss_pred -------------ccCccEEEEEEecCCh----------h--HHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhh
Confidence 0125799999764221 1 2467899999999999999885321 111 112
Q ss_pred HHHHHHHHHh-cCccEEEeecc--cceEEEEEEcC
Q 038592 415 DMLIQEFRDV-FQELYEIDVGN--EENFVLIATGL 446 (478)
Q Consensus 415 ~~v~~~l~~v-F~~v~~~~v~~--~~N~Vl~a~~~ 446 (478)
...+..|.+. |..+...++.. ..+.+++|.+.
T Consensus 194 ~~~l~~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k~ 228 (230)
T 1fbn_A 194 KEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIWE 228 (230)
T ss_dssp HHHHHHHHHHTEEEEEEEECTTTSTTEEEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEccCCCccceEEEEEEeC
Confidence 1223355554 65444444432 23566666653
No 59
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.86 E-value=1.1e-08 Score=100.14 Aligned_cols=148 Identities=16% Similarity=0.167 Sum_probs=99.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.+|+|.|.++..+.... +.+|++||+++.+++.|++.+....-++++++.+|..+.+
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~----------------- 172 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL----------------- 172 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG-----------------
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhc-----------------
Confidence 5699999999999999888765 6899999999999999998763211237999999987652
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCC-----C--CCCCCCCC--------ChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARN-----G--TSAPPVEF--------VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~-----g--~s~Pp~~f--------~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|+.+..-..... . ...|...+ .-..+++.+++.|+|||.+++..
T Consensus 173 --------------~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 173 --------------AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp --------------TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred --------------ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2457999999631100000 0 01122222 23678999999999999999876
Q ss_pred CCCCchHHHHHHHHHHHh-cCccEEEeecccceEEEEEE
Q 038592 407 IPPNRSFYDMLIQEFRDV-FQELYEIDVGNEENFVLIAT 444 (478)
Q Consensus 407 ~~~~~~~~~~v~~~l~~v-F~~v~~~~v~~~~N~Vl~a~ 444 (478)
.....+ .+.+.+++. |..+...+--.+...++++.
T Consensus 239 ~~~~~~---~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~ 274 (276)
T 2b3t_A 239 GWQQGE---AVRQAFILAGYHDVETCRDYGDNERVTLGR 274 (276)
T ss_dssp CSSCHH---HHHHHHHHTTCTTCCEEECTTSSEEEEEEE
T ss_pred CchHHH---HHHHHHHHCCCcEEEEEecCCCCCcEEEEE
Confidence 544433 344445544 76555444334456666664
No 60
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.86 E-value=1.1e-08 Score=94.55 Aligned_cols=105 Identities=19% Similarity=0.117 Sum_probs=81.7
Q ss_pred CeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 264 PKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
.+||.||+|.|.++..+.+.++.+|+++|+++.+++.|++.+... ..++++++.+|+.+.-
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------------------ 106 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP------------------ 106 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS------------------
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC------------------
Confidence 499999999999999998886789999999999999999886422 2468999999986531
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
..+.+||+|++.-. +...+ ....+++.+++.|+|||.+++....
T Consensus 107 ------------~~~~~~D~v~~~~~-------l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 107 ------------IEDNYADLIVSRGS-------VFFWE---DVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp ------------SCTTCEEEEEEESC-------GGGCS---CHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ------------CCcccccEEEECch-------Hhhcc---CHHHHHHHHHHhCCCCCEEEEEecc
Confidence 14578999998421 10001 2378999999999999999986443
No 61
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.85 E-value=8.5e-09 Score=98.96 Aligned_cols=121 Identities=23% Similarity=0.247 Sum_probs=93.3
Q ss_pred CCeEEEEeCchhHHHHHHHhh-C-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-L-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+||.+|+|.|.++..+.+. . ..+|+++|+++.+++.|++.+... ..++++++.+|+.+.+
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------------- 158 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI--------------- 158 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC---------------
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc---------------
Confidence 569999999999999999887 3 689999999999999999886321 2356999999988542
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
....||+|++|... ...+++.+++.|+|||.+++...+. +....+.+
T Consensus 159 ----------------~~~~~D~v~~~~~~---------------~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~ 205 (255)
T 3mb5_A 159 ----------------EEENVDHVILDLPQ---------------PERVVEHAAKALKPGGFFVAYTPCS--NQVMRLHE 205 (255)
T ss_dssp ----------------CCCSEEEEEECSSC---------------GGGGHHHHHHHEEEEEEEEEEESSH--HHHHHHHH
T ss_pred ----------------CCCCcCEEEECCCC---------------HHHHHHHHHHHcCCCCEEEEEECCH--HHHHHHHH
Confidence 34579999996321 1468999999999999999876544 33455667
Q ss_pred HHHHh---cCccEEE
Q 038592 420 EFRDV---FQELYEI 431 (478)
Q Consensus 420 ~l~~v---F~~v~~~ 431 (478)
.+++. |..+..+
T Consensus 206 ~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 206 KLREFKDYFMKPRTI 220 (255)
T ss_dssp HHHHTGGGBSCCEEE
T ss_pred HHHHcCCCccccEEE
Confidence 77766 7765444
No 62
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.85 E-value=2.5e-08 Score=97.86 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=97.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|..+..+.+.. + .+|+++|+++..++.+++.+....-++++++.+|+.++......
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~----------- 152 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLK----------- 152 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-----------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhh-----------
Confidence 4699999999999999888875 4 79999999999999999875322224799999999988643211
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCC--C---C-----CCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSA--P---P-----VEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~--P---p-----~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
...+||+|++|+..+.. |+.- | + ..-...++++.+.+.|+|||.+++...+..
T Consensus 153 ---------------~~~~fD~Vl~d~Pcs~~--g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 153 ---------------NEIFFDKILLDAPCSGN--IIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp ---------------TTCCEEEEEEEECCC--------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred ---------------ccccCCEEEEcCCCCCC--cccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 24579999999643210 1100 0 0 001347899999999999999999776654
Q ss_pred chHHHHHHHHHHHhcCccEEEe
Q 038592 411 RSFYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 411 ~~~~~~v~~~l~~vF~~v~~~~ 432 (478)
++.-..+++.+.+-++.....+
T Consensus 216 ~~ene~~v~~~l~~~~~~~~~~ 237 (274)
T 3ajd_A 216 VEENEEVIKYILQKRNDVELII 237 (274)
T ss_dssp TTSSHHHHHHHHHHCSSEEEEC
T ss_pred hHHhHHHHHHHHHhCCCcEEec
Confidence 3333445555555555543333
No 63
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.85 E-value=5.4e-09 Score=101.90 Aligned_cols=104 Identities=14% Similarity=0.098 Sum_probs=78.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC-----------------CCCCCeEEEEchHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL-----------------EDGEFLQVSVGDAIEFLE 325 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~-----------------~~d~rl~v~v~Dg~~~l~ 325 (478)
..+||++|||.|..+.+|.+. +.+|++||+++.+++.|++..+. ...++++++++|+.++-.
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCeEEEeCCCCcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 569999999999999999876 77999999999999999877653 124689999999877521
Q ss_pred HHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 326 KLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
. ...+||+|+.- .. ...+ |+. ....+++.+++.|+|||.+++
T Consensus 148 ~-----------------------------~~~~FD~V~~~-~~---l~~l--~~~--~~~~~l~~~~~~LkpGG~l~l 189 (252)
T 2gb4_A 148 A-----------------------------NIGKFDRIWDR-GA---LVAI--NPG--DHDRYADIILSLLRKEFQYLV 189 (252)
T ss_dssp G-----------------------------CCCCEEEEEES-SS---TTTS--CGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred c-----------------------------cCCCEEEEEEh-hh---hhhC--CHH--HHHHHHHHHHHHcCCCeEEEE
Confidence 0 12689999952 11 1111 221 246799999999999999864
No 64
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.84 E-value=3.7e-09 Score=98.01 Aligned_cols=103 Identities=16% Similarity=0.029 Sum_probs=81.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|+|.++..+.... +.+|++||+++.+++.|++.+....-++++++.+|+.++.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------------- 128 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP----------------- 128 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-----------------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-----------------
Confidence 4699999999999998888875 6899999999999999998764322234999999987652
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
...+||+|++... . .-..+++.+++.|+|||.+++......
T Consensus 129 --------------~~~~~D~i~~~~~--------~------~~~~~l~~~~~~L~~gG~l~~~~~~~~ 169 (207)
T 1jsx_A 129 --------------SEPPFDGVISRAF--------A------SLNDMVSWCHHLPGEQGRFYALKGQMP 169 (207)
T ss_dssp --------------CCSCEEEEECSCS--------S------SHHHHHHHHTTSEEEEEEEEEEESSCC
T ss_pred --------------ccCCcCEEEEecc--------C------CHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 2457999997321 0 126899999999999999998766543
No 65
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.84 E-value=5.7e-08 Score=90.50 Aligned_cols=140 Identities=14% Similarity=0.144 Sum_probs=99.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. ..+|++||+++.+++.|++.+.- .++++++++|+.++.
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~~d~~~~~------------------ 110 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPH-CKRLTVIDVMPRAIGRACQRTKR--WSHISWAATDILQFS------------------ 110 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGG-EEEEEEEESCHHHHHHHHHHTTT--CSSEEEEECCTTTCC------------------
T ss_pred CCcEEEEcCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHhccc--CCCeEEEEcchhhCC------------------
Confidence 569999999999999988876 46999999999999999998763 348999999987652
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh----HHHHHHHHHccCcCcEEEEEeCCC-------Cc
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR----KDVLLAARLILSDFGIFVMNVIPP-------NR 411 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~----~efl~~~~~~L~~~Gilv~N~~~~-------~~ 411 (478)
...+||+|++.- . + .++-+ ..+++.+++.|+|||.+++..... ..
T Consensus 111 -------------~~~~fD~v~~~~----~---l----~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 166 (216)
T 3ofk_A 111 -------------TAELFDLIVVAE----V---L----YYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHV 166 (216)
T ss_dssp -------------CSCCEEEEEEES----C---G----GGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHTTCS
T ss_pred -------------CCCCccEEEEcc----H---H----HhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhhhhh
Confidence 356899999941 1 0 11221 478999999999999999865322 12
Q ss_pred hHHHHHHHHHHHhcCccEEEeec---ccceEEEEEEcCC
Q 038592 412 SFYDMLIQEFRDVFQELYEIDVG---NEENFVLIATGLS 447 (478)
Q Consensus 412 ~~~~~v~~~l~~vF~~v~~~~v~---~~~N~Vl~a~~~~ 447 (478)
.....+...+.+.|..+-.+... .....++.....+
T Consensus 167 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~l~~~~~~ 205 (216)
T 3ofk_A 167 AGAETVITILTEALTEVERVQCQGQSADEDCLLARFRNP 205 (216)
T ss_dssp CCHHHHHHHHHHHSEEEEEEEEECSSTTCEEEEEEEECC
T ss_pred hhHHHHHHHHHhhccceEEEeccCCccccchhHHHHhCC
Confidence 22345666777777766544432 2334555444444
No 66
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.84 E-value=2e-08 Score=94.81 Aligned_cols=142 Identities=19% Similarity=0.282 Sum_probs=95.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|.++..+.+.. ..+|++||+++.+++.|++..... ++++++.+|+.+...- .
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~--~----------- 138 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEY--R----------- 138 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGG--T-----------
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchh--h-----------
Confidence 4699999999999999998874 479999999999999998876532 6899999998763100 0
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC----Cc---hH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP----NR---SF 413 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~----~~---~~ 413 (478)
....+||+|++|... |. ....++..+++.|+|||.+++-+... .. .+
T Consensus 139 --------------~~~~~~D~v~~~~~~----------~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 192 (227)
T 1g8a_A 139 --------------ALVPKVDVIFEDVAQ----------PT--QAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQV 192 (227)
T ss_dssp --------------TTCCCEEEEEECCCS----------TT--HHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHH
T ss_pred --------------cccCCceEEEECCCC----------Hh--HHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhh
Confidence 023479999987531 11 23456999999999999998764221 11 12
Q ss_pred HHHHHHHHHHhcCccEEEeecc--cceEEEEEEc
Q 038592 414 YDMLIQEFRDVFQELYEIDVGN--EENFVLIATG 445 (478)
Q Consensus 414 ~~~v~~~l~~vF~~v~~~~v~~--~~N~Vl~a~~ 445 (478)
....+..+.+.|..+....+.. ....++++.+
T Consensus 193 ~~~~l~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 193 FREVERELSEYFEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp HHHHHHHHHTTSEEEEEEECTTTSSSEEEEEEEC
T ss_pred hHHHHHHHHhhceeeeEeccCcccCCCEEEEEEe
Confidence 2223344444476555555432 2345555543
No 67
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.84 E-value=7.4e-09 Score=95.36 Aligned_cols=116 Identities=14% Similarity=0.148 Sum_probs=84.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+||.+|+|.|.++..+.+.. ..+|++||+++.+++.|++.+.... .++++++.+|+.++...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~------------- 89 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKY------------- 89 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGT-------------
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhh-------------
Confidence 4699999999999999988874 4799999999999999998864321 36899999998766321
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCC-CCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDS-GDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s-~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|..- ..........+ -...++++.+.+.|+|||.+++.....
T Consensus 90 ----------------~~~~fD~v~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 90 ----------------IDCPVKAVMFNLGYLPSGDHSISTRP--ETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ----------------CCSCEEEEEEEESBCTTSCTTCBCCH--HHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred ----------------ccCCceEEEEcCCcccCcccccccCc--ccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 34689999997521 00000000000 022579999999999999999877543
No 68
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.83 E-value=1.1e-07 Score=88.76 Aligned_cols=99 Identities=20% Similarity=0.217 Sum_probs=79.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+. .+++++.+|+.++-
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~------------------ 102 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFE------------------ 102 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCC------------------
T ss_pred CCeEEEeCCCCCHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcC------------------
Confidence 569999999999999988876 7899999999999999999876 57889999887641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
.. .+||+|++.. . + ..+-. ..+|+.+++.|+|||.+++....
T Consensus 103 ------------~~-~~fD~v~~~~----~---l----~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 103 ------------VP-TSIDTIVSTY----A---F----HHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp ------------CC-SCCSEEEEES----C---G----GGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred ------------CC-CCeEEEEECc----c---h----hcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 13 7899999952 1 1 11222 34999999999999999987543
No 69
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.82 E-value=1.6e-08 Score=93.77 Aligned_cols=101 Identities=13% Similarity=0.156 Sum_probs=81.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++ .+ .++++++.+|+.++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~~-~~---~~~~~~~~~d~~~~~------------------ 103 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL-ADRVTALDGSAEMIAEAGR-HG---LDNVEFRQQDLFDWT------------------ 103 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHGG-GC---CTTEEEEECCTTSCC------------------
T ss_pred CCeEEEECCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHh-cC---CCCeEEEecccccCC------------------
Confidence 469999999999999998887 7799999999999999998 23 267999999987651
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
...+||+|++.. .+ .++-. ..+++.+++.|+|||.+++...++.
T Consensus 104 -------------~~~~~D~v~~~~-------~l----~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 104 -------------PDRQWDAVFFAH-------WL----AHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp -------------CSSCEEEEEEES-------CG----GGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred -------------CCCceeEEEEec-------hh----hcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 467899999842 11 11222 7899999999999999998776653
No 70
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.82 E-value=1.2e-08 Score=98.32 Aligned_cols=130 Identities=12% Similarity=0.134 Sum_probs=89.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcC------CCCCCCeEEEEchHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFG------LEDGEFLQVSVGDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg------~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~ 335 (478)
..+||.||+|.|.++..|.+.. +..|++||+++.+++.|++... ....++++++.+|+.+++...
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~-------- 118 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNF-------- 118 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHH--------
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhh--------
Confidence 5689999999999999988875 6899999999999999986532 112357999999998865432
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHH
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYD 415 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~ 415 (478)
.....||.|++...+....... .-..+....+++.+++.|+|||.|++.... .....
T Consensus 119 -------------------~~~~~~D~v~~~~~dp~~k~~h--~krr~~~~~~l~~~~~~LkpGG~l~~~td~--~~~~~ 175 (235)
T 3ckk_A 119 -------------------FYKGQLTKMFFLFPDPHFKRTK--HKWRIISPTLLAEYAYVLRVGGLVYTITDV--LELHD 175 (235)
T ss_dssp -------------------CCTTCEEEEEEESCC-------------CCCHHHHHHHHHHEEEEEEEEEEESC--HHHHH
T ss_pred -------------------CCCcCeeEEEEeCCCchhhhhh--hhhhhhhHHHHHHHHHHCCCCCEEEEEeCC--HHHHH
Confidence 1356799999854221110000 001234578999999999999999976543 34444
Q ss_pred HHHHHHHH
Q 038592 416 MLIQEFRD 423 (478)
Q Consensus 416 ~v~~~l~~ 423 (478)
.+...+.+
T Consensus 176 ~~~~~l~~ 183 (235)
T 3ckk_A 176 WMCTHFEE 183 (235)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 44444443
No 71
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.81 E-value=3.6e-08 Score=101.46 Aligned_cols=114 Identities=24% Similarity=0.238 Sum_probs=86.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+... ..+|++||+++..++.|++.+....-++++++.+|+.+++.....
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~------------- 275 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEK------------- 275 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHH-------------
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHh-------------
Confidence 358999999999999998887 679999999999999999987543223499999999999876432
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-----ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-----VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-----~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
.+.+||+|++|...-. . .+... .-.+++..+.+.|+|||++++...+.
T Consensus 276 -------------~~~~fD~Ii~dpP~~~----~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 276 -------------EGERFDLVVLDPPAFA----K--GKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp -------------TTCCEEEEEECCCCSC----C--STTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -------------cCCCeeEEEECCCCCC----C--ChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 3568999999742110 0 01111 12568899999999999999876654
No 72
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.81 E-value=1.3e-08 Score=99.63 Aligned_cols=98 Identities=20% Similarity=0.099 Sum_probs=77.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||||+|.++..|.++ ..+|++||+++.+++.|+++ ++++++++|+.+.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~-~~~v~gvD~s~~ml~~a~~~------~~v~~~~~~~e~~------------------- 93 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF-FERVHAVDPGEAQIRQALRH------PRVTYAVAPAEDT------------------- 93 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT-CSEEEEEESCHHHHHTCCCC------TTEEEEECCTTCC-------------------
T ss_pred CCCEEEEcCCCCHHHHHHHHh-CCEEEEEeCcHHhhhhhhhc------CCceeehhhhhhh-------------------
Confidence 568999999999999988876 46999999999999988653 6799999997543
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
+.++..||+|++- . . + ..+-...+++.+++.|+|||+|++....
T Consensus 94 -----------~~~~~sfD~v~~~--~--~---~----h~~~~~~~~~e~~rvLkpgG~l~~~~~~ 137 (257)
T 4hg2_A 94 -----------GLPPASVDVAIAA--Q--A---M----HWFDLDRFWAELRRVARPGAVFAAVTYG 137 (257)
T ss_dssp -----------CCCSSCEEEEEEC--S--C---C----TTCCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----------cccCCcccEEEEe--e--e---h----hHhhHHHHHHHHHHHcCCCCEEEEEECC
Confidence 1256789999982 1 1 1 1233478999999999999999875543
No 73
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.81 E-value=1.1e-08 Score=95.07 Aligned_cols=99 Identities=24% Similarity=0.219 Sum_probs=78.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. ..+|++||+++.+++.|++.+....-++++++.+|+.+...
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------------- 139 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQ----------------- 139 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-----------------
T ss_pred CCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCc-----------------
Confidence 579999999999999988887 78999999999999999988743223479999999987531
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|+++..- .++. ..+++.|+|||.+++.+..
T Consensus 140 -------------~~~~~D~i~~~~~~-----------~~~~-----~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 140 -------------ARAPFDAIIVTAAP-----------PEIP-----TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp -------------GGCCEEEEEESSBC-----------SSCC-----THHHHTEEEEEEEEEEECS
T ss_pred -------------cCCCccEEEEccch-----------hhhh-----HHHHHhcccCcEEEEEEcC
Confidence 24679999996311 1112 2588999999999998876
No 74
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.81 E-value=1.8e-08 Score=95.17 Aligned_cols=102 Identities=24% Similarity=0.367 Sum_probs=81.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.||+|.|.++..+.+.. +.+|++||+++.+++.|++.+... ++++++.+|+.++.
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~----------------- 105 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN--LKVKYIEADYSKYD----------------- 105 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC--TTEEEEESCTTTCC-----------------
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC--CCEEEEeCchhccC-----------------
Confidence 5799999999999999998876 789999999999999999987532 38999999987651
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEeCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|++.. . -..+-. ..+++.+++.|+|||.+++....
T Consensus 106 --------------~~~~fD~v~~~~----~-------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 150 (234)
T 3dtn_A 106 --------------FEEKYDMVVSAL----S-------IHHLEDEDKKELYKRSYSILKESGIFINADLV 150 (234)
T ss_dssp --------------CCSCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --------------CCCCceEEEEeC----c-------cccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 236899999952 1 112222 25999999999999999985533
No 75
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.80 E-value=3.2e-08 Score=96.15 Aligned_cols=121 Identities=12% Similarity=-0.017 Sum_probs=87.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|+|.++..|.... +.+|++||+++.+++.|++......-.+++++.+|+.++...
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~--------------- 145 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLARE--------------- 145 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTS---------------
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcc---------------
Confidence 5799999999999988888774 689999999999999999765321123599999999887311
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
.....+||+|+..... --..+++.+.+.|+|||.+++-......+....+...+
T Consensus 146 ------------~~~~~~fD~I~s~a~~--------------~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l 199 (249)
T 3g89_A 146 ------------AGHREAYARAVARAVA--------------PLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPAL 199 (249)
T ss_dssp ------------TTTTTCEEEEEEESSC--------------CHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHH
T ss_pred ------------cccCCCceEEEECCcC--------------CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHH
Confidence 0124689999996421 12679999999999999998755443333333444444
Q ss_pred HHh
Q 038592 422 RDV 424 (478)
Q Consensus 422 ~~v 424 (478)
+..
T Consensus 200 ~~~ 202 (249)
T 3g89_A 200 ERL 202 (249)
T ss_dssp HHH
T ss_pred HHc
Confidence 443
No 76
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.80 E-value=2.3e-09 Score=103.28 Aligned_cols=98 Identities=17% Similarity=0.273 Sum_probs=77.4
Q ss_pred CCeEEEEeCchhHHHHHHHhh-----CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH--HHHHHhhhcCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-----LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF--LEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-----~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~--l~~~~~~~~~~~ 335 (478)
+.+||.||+|.|.++..|.+. .+.+|++||+++.+++.|+. + .++++++++|+.++ +..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~---~--~~~v~~~~gD~~~~~~l~~--------- 147 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS---D--MENITLHQGDCSDLTTFEH--------- 147 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG---G--CTTEEEEECCSSCSGGGGG---------
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc---c--CCceEEEECcchhHHHHHh---------
Confidence 569999999999999988876 36899999999999999973 2 36899999999874 221
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHH-ccCcCcEEEEEe
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARL-ILSDFGIFVMNV 406 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~-~L~~~Gilv~N~ 406 (478)
....+||+|++|... . .-..+|..+.+ .|+|||++++.-
T Consensus 148 -------------------~~~~~fD~I~~d~~~-----------~--~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 148 -------------------LREMAHPLIFIDNAH-----------A--NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp -------------------GSSSCSSEEEEESSC-----------S--SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred -------------------hccCCCCEEEECCch-----------H--hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 023369999998531 1 23679999997 999999999853
No 77
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.80 E-value=8.5e-08 Score=86.83 Aligned_cols=121 Identities=21% Similarity=0.233 Sum_probs=87.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.+++++|+++.+++.|++.+ ++++++.+|..++-
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~------------------ 102 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ-GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQ------------------ 102 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSC------------------
T ss_pred CCeEEEECCCCCHHHHHHHHC-CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCC------------------
Confidence 579999999999999988876 679999999999999999986 35889999976531
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
....+||+|++....-. .+ ++. ....+++.+++.|+|||.+++............+.+.+.
T Consensus 103 ------------~~~~~~D~i~~~~~~~~---~~--~~~--~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~ 163 (195)
T 3cgg_A 103 ------------ISETDFDLIVSAGNVMG---FL--AED--GREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAE 163 (195)
T ss_dssp ------------CCCCCEEEEEECCCCGG---GS--CHH--HHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHH
T ss_pred ------------CCCCceeEEEECCcHHh---hc--ChH--HHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHH
Confidence 13567999998411000 00 000 126899999999999999999776553222444555555
Q ss_pred Hh-cC
Q 038592 423 DV-FQ 426 (478)
Q Consensus 423 ~v-F~ 426 (478)
+. |.
T Consensus 164 ~~Gf~ 168 (195)
T 3cgg_A 164 RVGLE 168 (195)
T ss_dssp HHTEE
T ss_pred HcCCE
Confidence 54 54
No 78
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.80 E-value=2.7e-08 Score=95.13 Aligned_cols=117 Identities=21% Similarity=0.162 Sum_probs=88.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+||.+|+|.|.++..+.+.. ..+|+++|+++.+++.|++.+... ..++++++.+|+.+. .
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~------------- 161 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--E------------- 161 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--C-------------
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--C-------------
Confidence 4699999999999999888873 579999999999999999886211 146899999998764 0
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
.....||+|++|..+ ...+++.+.+.|+|||.+++...+. +....+++
T Consensus 162 ---------------~~~~~~D~v~~~~~~---------------~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~ 209 (258)
T 2pwy_A 162 ---------------LEEAAYDGVALDLME---------------PWKVLEKAALALKPDRFLVAYLPNI--TQVLELVR 209 (258)
T ss_dssp ---------------CCTTCEEEEEEESSC---------------GGGGHHHHHHHEEEEEEEEEEESCH--HHHHHHHH
T ss_pred ---------------CCCCCcCEEEECCcC---------------HHHHHHHHHHhCCCCCEEEEEeCCH--HHHHHHHH
Confidence 134579999996421 1368999999999999999877544 33445555
Q ss_pred HHHHh-cC
Q 038592 420 EFRDV-FQ 426 (478)
Q Consensus 420 ~l~~v-F~ 426 (478)
.|++. |.
T Consensus 210 ~l~~~gf~ 217 (258)
T 2pwy_A 210 AAEAHPFR 217 (258)
T ss_dssp HHTTTTEE
T ss_pred HHHHCCCc
Confidence 56543 44
No 79
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.79 E-value=1.1e-08 Score=98.40 Aligned_cols=130 Identities=12% Similarity=0.191 Sum_probs=89.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC--------CCCCeEEEEchHHHHHHHHHhhhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE--------DGEFLQVSVGDAIEFLEKLARQIVG 333 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~--------~d~rl~v~v~Dg~~~l~~~~~~~~~ 333 (478)
..+||.||+|.|.++..+.... +.+|++||+++.+++.|++.+... .-++++++.+|+.+++.+.
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~------ 123 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNF------ 123 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGT------
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHh------
Confidence 5689999999999999888875 579999999999999998765211 1247999999998866431
Q ss_pred CCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchH
Q 038592 334 KNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSF 413 (478)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~ 413 (478)
.....+|.|++...+......- --..+...+++..+.+.|+|||.|++.+. ...+
T Consensus 124 ---------------------~~~~~~d~v~~~~p~p~~k~~~--~~~r~~~~~~l~~~~~~LkpgG~l~~~td--~~~~ 178 (246)
T 2vdv_E 124 ---------------------FEKGQLSKMFFCFPDPHFKQRK--HKARIITNTLLSEYAYVLKEGGVVYTITD--VKDL 178 (246)
T ss_dssp ---------------------SCTTCEEEEEEESCCCC--------CSSCCCHHHHHHHHHHEEEEEEEEEEES--CHHH
T ss_pred ---------------------ccccccCEEEEECCCcccccch--hHHhhccHHHHHHHHHHcCCCCEEEEEec--cHHH
Confidence 1356799998864222110000 00123457999999999999999998543 2344
Q ss_pred HHHHHHHHHH
Q 038592 414 YDMLIQEFRD 423 (478)
Q Consensus 414 ~~~v~~~l~~ 423 (478)
.+.+...+.+
T Consensus 179 ~~~~~~~~~~ 188 (246)
T 2vdv_E 179 HEWMVKHLEE 188 (246)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4444444433
No 80
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.78 E-value=7.7e-08 Score=88.76 Aligned_cols=103 Identities=19% Similarity=0.237 Sum_probs=81.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..|.+. +.+|++||+++.+++.|++.+ ++++++.+|+.++-
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~------------------ 97 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL-GHQIEGLEPATRLVELARQTH-----PSVTFHHGTITDLS------------------ 97 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT-TCCEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGGG------------------
T ss_pred CCeEEEecCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhC-----CCCeEEeCcccccc------------------
Confidence 469999999999999988876 679999999999999999884 47899999987641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++.- ....+ |+. .-..+++.+++.|+|||.+++.....
T Consensus 98 ------------~~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 98 ------------DSPKRWAGLLAWY----SLIHM--GPG--ELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp ------------GSCCCEEEEEEES----SSTTC--CTT--THHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred ------------cCCCCeEEEEehh----hHhcC--CHH--HHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 1457899999942 11011 111 24789999999999999999877554
No 81
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.78 E-value=4.5e-08 Score=103.70 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=98.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|+.+..|.+.. + .+|+++|+++..++.|++.+....-. ++++.+|+.++...
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~-------------- 166 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEA-------------- 166 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHH--------------
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhh--------------
Confidence 4699999999999999998875 3 79999999999999999775311123 89999999997543
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCC-CCCCCC-------------ChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTS-APPVEF-------------VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s-~Pp~~f-------------~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++|+..+.. |+. --|... ...++|+.+.+.|+|||.|++.+
T Consensus 167 ---------------~~~~FD~Il~D~PcSg~--G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 167 ---------------FGTYFHRVLLDAPCSGE--GMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp ---------------HCSCEEEEEEECCCCCG--GGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ---------------ccccCCEEEECCCcCCc--cccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 24579999999865321 221 112211 23789999999999999999887
Q ss_pred CCCCchHHHHHHHHHHHhcCcc
Q 038592 407 IPPNRSFYDMLIQEFRDVFQEL 428 (478)
Q Consensus 407 ~~~~~~~~~~v~~~l~~vF~~v 428 (478)
.+..++--+.++..+.+-++..
T Consensus 230 Cs~~~eEne~vv~~~l~~~~~~ 251 (464)
T 3m6w_A 230 CTFAPEENEGVVAHFLKAHPEF 251 (464)
T ss_dssp SCCCGGGTHHHHHHHHHHCTTE
T ss_pred ccCchhcCHHHHHHHHHHCCCc
Confidence 7665554555666666666543
No 82
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.77 E-value=8.2e-09 Score=101.29 Aligned_cols=146 Identities=14% Similarity=0.098 Sum_probs=95.9
Q ss_pred CCeEEEEeCchhHHHHHHHh--------hCC-----CEEEEEECCh--------------HHHHHHHHhcC---------
Q 038592 263 RPKALCVGVGGGALVSFLRT--------QLD-----FEVVGVEMDE--------------VVLRVARQYFG--------- 306 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~--------~~~-----~~V~~VEiDp--------------~Vl~vA~~~Fg--------- 306 (478)
+.+||.||.|+|.....+.+ .++ .+++++|.+| ++.+.|++.+.
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 57999999999986655433 232 5899999997 44446666532
Q ss_pred ----CC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC
Q 038592 307 ----LE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV 381 (478)
Q Consensus 307 ----~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~ 381 (478)
+. ...+++++.+|+.+.+.+... .....||+|++|.+++.. .+
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~-------------------------~~~~~~D~iflD~fsp~~-------~p 188 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDD-------------------------SLNQKVDAWFLDGFAPAK-------NP 188 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCG-------------------------GGTTCEEEEEECSSCTTT-------CG
T ss_pred hheeccCCceEEEEEECcHHHHHhhccc-------------------------ccCCeEEEEEECCCCccc-------Ch
Confidence 11 124688999999998765200 012379999999877542 23
Q ss_pred CCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHHHh-cCccEEEeecccceEEEEEEcCC
Q 038592 382 EFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFRDV-FQELYEIDVGNEENFVLIATGLS 447 (478)
Q Consensus 382 ~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~~v-F~~v~~~~v~~~~N~Vl~a~~~~ 447 (478)
++.+.++|+.++++|+|||+|+. .+.... +.+.|++. |. +...+-......++.+.+.+
T Consensus 189 ~lw~~~~l~~l~~~L~pGG~l~t--ysaa~~----vrr~L~~aGF~-v~~~~g~~~kr~m~~a~~~~ 248 (257)
T 2qy6_A 189 DMWTQNLFNAMARLARPGGTLAT--FTSAGF----VRRGLQEAGFT-MQKRKGFGRKREMLCGVMEQ 248 (257)
T ss_dssp GGCCHHHHHHHHHHEEEEEEEEE--SCCBHH----HHHHHHHHTEE-EEEECCSTTCCCEEEEEEC-
T ss_pred hhcCHHHHHHHHHHcCCCcEEEE--EeCCHH----HHHHHHHCCCE-EEeCCCCCCCCceEEEEecC
Confidence 67899999999999999999994 444333 44556665 64 44443322334566665544
No 83
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.77 E-value=2.1e-08 Score=96.91 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=82.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.||+|.|.++..+.+....+|++||+++.+++.|++.+... ..++++++++|+.++-
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 109 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP----------------- 109 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----------------
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-----------------
Confidence 5799999999999999999886679999999999999999876321 2467999999985531
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
....+||+|++.- . + ..+-...+++.+++.|+|||.+++...
T Consensus 110 -------------~~~~~fD~i~~~~--~-----~----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 110 -------------FRNEELDLIWSEG--A-----I----YNIGFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp -------------CCTTCEEEEEESS--C-----G----GGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred -------------CCCCCEEEEEEcC--C-----c----eecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 1356899999831 0 1 112347899999999999999998653
No 84
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.77 E-value=5.6e-08 Score=100.42 Aligned_cols=119 Identities=20% Similarity=0.126 Sum_probs=87.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC--CCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED--GEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~--d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|+++..+......+|++||+++..++.|++.+.... +++++++.+|+.+++.....
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~----------- 289 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRD----------- 289 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHH-----------
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHh-----------
Confidence 46999999999999998887644699999999999999998875432 23799999999999876432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCC-CCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-NGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|....... ..+. ...-.-.+++..+.+.|+|||++++...+.
T Consensus 290 ---------------~~~~fD~Ii~dpP~~~~~~~~~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 290 ---------------RGEKFDVIVMDPPKFVENKSQLM--GACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ---------------TTCCEEEEEECCSSTTTCSSSSS--CCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ---------------cCCCCCEEEECCCCCCCChhHHH--HHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 246799999985221100 0000 000123678999999999999999866554
No 85
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.77 E-value=4.8e-08 Score=91.07 Aligned_cols=144 Identities=15% Similarity=0.108 Sum_probs=99.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. ..+|++||+++.+++.|++.+....-++++++.+|+.++-
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~---------------- 101 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP---------------- 101 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS----------------
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC----------------
Confidence 5699999999999998888874 5799999999999999998864222247999999986541
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCc---------
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNR--------- 411 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~--------- 411 (478)
..+.+||+|++... +...+ ....+++.+++.|+|||.+++..+....
T Consensus 102 --------------~~~~~fD~v~~~~~-------l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~ 157 (219)
T 3dh0_A 102 --------------LPDNTVDFIFMAFT-------FHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEE 157 (219)
T ss_dssp --------------SCSSCEEEEEEESC-------GGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGG
T ss_pred --------------CCCCCeeEEEeehh-------hhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhc
Confidence 14568999998421 10011 2378999999999999999986543211
Q ss_pred -hHHHHHHHHHHHh-cCccEEEeecccceEEEEEEcCC
Q 038592 412 -SFYDMLIQEFRDV-FQELYEIDVGNEENFVLIATGLS 447 (478)
Q Consensus 412 -~~~~~v~~~l~~v-F~~v~~~~v~~~~N~Vl~a~~~~ 447 (478)
-..+.+.+.+++. |..+....... ....+++.+..
T Consensus 158 ~~~~~~~~~~l~~~Gf~~~~~~~~~~-~~~~~~~~k~~ 194 (219)
T 3dh0_A 158 VYSEWEVGLILEDAGIRVGRVVEVGK-YCFGVYAMIVK 194 (219)
T ss_dssp SCCHHHHHHHHHHTTCEEEEEEEETT-TEEEEEEECC-
T ss_pred ccCHHHHHHHHHHCCCEEEEEEeeCC-ceEEEEEEecc
Confidence 0134556666665 66555444443 46666776543
No 86
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.77 E-value=4.5e-09 Score=98.43 Aligned_cols=101 Identities=16% Similarity=0.180 Sum_probs=75.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC------------CCCCeEEEEchHHHHHHHHHhh
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE------------DGEFLQVSVGDAIEFLEKLARQ 330 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~------------~d~rl~v~v~Dg~~~l~~~~~~ 330 (478)
..+||.+|||.|..+.+|.+. +.+|++||+++.+++.|++..+.. ..++++++++|+.++-..
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~---- 97 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR---- 97 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH----
T ss_pred CCEEEEeCCCCcHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc----
Confidence 579999999999999999886 679999999999999999876541 135799999998765211
Q ss_pred hcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcE
Q 038592 331 IVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGI 401 (478)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gi 401 (478)
...+||+|+.-. . +...|.. ....+++.+++.|+|||.
T Consensus 98 -------------------------~~~~fD~v~~~~-~------l~~l~~~-~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 98 -------------------------DIGHCAAFYDRA-A------MIALPAD-MRERYVQHLEALMPQACS 135 (203)
T ss_dssp -------------------------HHHSEEEEEEES-C------GGGSCHH-HHHHHHHHHHHHSCSEEE
T ss_pred -------------------------cCCCEEEEEECc-c------hhhCCHH-HHHHHHHHHHHHcCCCcE
Confidence 014699998621 0 1101111 235689999999999997
No 87
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.77 E-value=1.2e-08 Score=97.18 Aligned_cols=105 Identities=24% Similarity=0.209 Sum_probs=79.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..|.+....+|++||+++.+++.|++.+......+++++.+|+.++.
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------------------ 141 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFT------------------ 141 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCC------------------
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcC------------------
Confidence 57999999999999988877666799999999999999999875432346899999976541
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....+||+|+++-. ...+ +.. .-..+++.+++.|+|||.+++.
T Consensus 142 ------------~~~~~fD~v~~~~~----l~~~--~~~--~~~~~l~~~~~~LkpgG~l~i~ 184 (241)
T 2ex4_A 142 ------------PEPDSYDVIWIQWV----IGHL--TDQ--HLAEFLRRCKGSLRPNGIIVIK 184 (241)
T ss_dssp ------------CCSSCEEEEEEESC----GGGS--CHH--HHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------CCCCCEEEEEEcch----hhhC--CHH--HHHHHHHHHHHhcCCCeEEEEE
Confidence 13457999998621 0000 100 0147999999999999999883
No 88
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.77 E-value=1.3e-08 Score=99.38 Aligned_cols=107 Identities=14% Similarity=0.165 Sum_probs=84.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+.-.. .++++++.+|+.+....
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--------------- 132 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER-GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASH--------------- 132 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGG---------------
T ss_pred CCEEEEeCCcchHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhh---------------
Confidence 569999999999999998887 7899999999999999998874322 36899999999876311
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
.+.+||+|++.-. +...+ -...+++.+++.|+|||.+++....+
T Consensus 133 --------------~~~~fD~v~~~~~-------l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 133 --------------LETPVDLILFHAV-------LEWVA---DPRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp --------------CSSCEEEEEEESC-------GGGCS---CHHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred --------------cCCCceEEEECch-------hhccc---CHHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 4578999998421 10011 12789999999999999999987654
No 89
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.76 E-value=3.6e-08 Score=94.33 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=82.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+....+|++||+++.+++.|++.+. .++++++.+|+.++-
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~------------------ 103 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIA------------------ 103 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCC------------------
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCC------------------
Confidence 67999999999999999988754499999999999999999986 578999999986531
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
....+||+|++.. ....+ + .-..+++.+++.|+|||.+++.+..
T Consensus 104 ------------~~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 104 ------------IEPDAYNVVLSSL----ALHYI---A---SFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp ------------CCTTCEEEEEEES----CGGGC---S---CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------CCCCCeEEEEEch----hhhhh---h---hHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 1457899999942 11011 1 2378999999999999999987543
No 90
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.76 E-value=5.1e-08 Score=86.43 Aligned_cols=126 Identities=20% Similarity=0.259 Sum_probs=87.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH--HHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL--EKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l--~~~~~~~~~~~~~~ 338 (478)
..+||.+|+|.|.++..+.+.. +.+++++|+++ +++. ++++++.+|..+.- +.....
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~-------- 83 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLER-------- 83 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHH--------
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhcc--------
Confidence 4699999999999999988874 58999999999 6532 57999999987651 111100
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCC--------hHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFV--------RKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~--------~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
....+||+|+.|..-.. .+.... ...+++.+++.|+|||.+++......
T Consensus 84 ----------------~~~~~~D~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 140 (180)
T 1ej0_A 84 ----------------VGDSKVQVVMSDMAPNM-------SGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE 140 (180)
T ss_dssp ----------------HTTCCEEEEEECCCCCC-------CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST
T ss_pred ----------------CCCCceeEEEECCCccc-------cCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC
Confidence 03467999999632110 010000 16899999999999999998776543
Q ss_pred chHHHHHHHHHHHhcCccEEEe
Q 038592 411 RSFYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 411 ~~~~~~v~~~l~~vF~~v~~~~ 432 (478)
. ...+...+++.|..+....
T Consensus 141 ~--~~~~~~~~~~~~~~~~~~~ 160 (180)
T 1ej0_A 141 G--FDEYLREIRSLFTKVKVRK 160 (180)
T ss_dssp T--HHHHHHHHHHHEEEEEEEC
T ss_pred c--HHHHHHHHHHhhhhEEeec
Confidence 2 3456777888887665443
No 91
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.76 E-value=4.9e-08 Score=87.53 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=77.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+... +|++||+++.+++.|++. .++++++.+| ..
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~-------------------- 70 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----FDSVITLSDP-KE-------------------- 70 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----CTTSEEESSG-GG--------------------
T ss_pred CCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CC--------------------
Confidence 46999999999999998887754 999999999999999988 3579999999 11
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++.-. +...+ -...+++.+++.|+|||.+++..+..
T Consensus 71 ------------~~~~~~D~v~~~~~-------l~~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 71 ------------IPDNSVDFILFANS-------FHDMD---DKQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp ------------SCTTCEEEEEEESC-------STTCS---CHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ------------CCCCceEEEEEccc-------hhccc---CHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 14678999998421 11011 24789999999999999999865443
No 92
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.76 E-value=4e-08 Score=101.29 Aligned_cols=140 Identities=16% Similarity=0.163 Sum_probs=97.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcC---CCCCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFG---LEDGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg---~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+||.+|+|.|.++..+.+.. +.+|++||+++.+++.|++.+. +....+++++.+|+.+.+
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~-------------- 288 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV-------------- 288 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC--------------
T ss_pred CCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC--------------
Confidence 4799999999999999998875 7899999999999999998763 222236888999987642
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHH
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 418 (478)
...+||+|++|.-- .. +. ..+. -...++++.+++.|+|||.+++-. .+.... .
T Consensus 289 -----------------~~~~fD~Ii~nppf--h~-~~-~~~~-~~~~~~l~~~~~~LkpgG~l~iv~-n~~~~~----~ 341 (375)
T 4dcm_A 289 -----------------EPFRFNAVLCNPPF--HQ-QH-ALTD-NVAWEMFHHARRCLKINGELYIVA-NRHLDY----F 341 (375)
T ss_dssp -----------------CTTCEEEEEECCCC-----------C-CHHHHHHHHHHHHEEEEEEEEEEE-ETTSCH----H
T ss_pred -----------------CCCCeeEEEECCCc--cc-Cc-ccCH-HHHHHHHHHHHHhCCCCcEEEEEE-ECCcCH----H
Confidence 45689999996310 00 00 0011 133579999999999999999833 333332 3
Q ss_pred HHHHHhcCccEEEeecccceEEEEEE
Q 038592 419 QEFRDVFQELYEIDVGNEENFVLIAT 444 (478)
Q Consensus 419 ~~l~~vF~~v~~~~v~~~~N~Vl~a~ 444 (478)
..+++.|..+..+.-. ..-.|+-+.
T Consensus 342 ~~l~~~fg~~~~~a~~-~~F~V~~~~ 366 (375)
T 4dcm_A 342 HKLKKIFGNCTTIATN-NKFVVLKAV 366 (375)
T ss_dssp HHHHHHHSCCEEEEEC-SSEEEEEEE
T ss_pred HHHHHhcCCEEEEeeC-CCEEEEEEc
Confidence 4677889887766532 234444444
No 93
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.76 E-value=1.7e-08 Score=95.71 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=76.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC---CCCeEEEEchHHHH--------------HH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED---GEFLQVSVGDAIEF--------------LE 325 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~---d~rl~v~v~Dg~~~--------------l~ 325 (478)
+++||.+|.| +.+.++.+..+.+|++||.|++..+.|+++|.-.. ..+++++++|+.+. +.
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 5799999985 45556665447899999999999999999985321 56899999997542 11
Q ss_pred HHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE-
Q 038592 326 KLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM- 404 (478)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~- 404 (478)
+.+... .. .....+||+||+|.+. ...++..+..+|++||++++
T Consensus 109 ~~~~~i------------------~~--~~~~~~fDlIfIDg~k---------------~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 109 DYPLAV------------------WR--TEGFRHPDVVLVDGRF---------------RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp HHHHGG------------------GG--CTTCCCCSEEEECSSS---------------HHHHHHHHHHHCSSCEEEEET
T ss_pred HHhhhh------------------hc--cccCCCCCEEEEeCCC---------------chhHHHHHHHhcCCCeEEEEe
Confidence 111000 00 0023679999998631 13566777899999999998
Q ss_pred EeCCC
Q 038592 405 NVIPP 409 (478)
Q Consensus 405 N~~~~ 409 (478)
|+..+
T Consensus 154 Nv~~r 158 (202)
T 3cvo_A 154 DYSQR 158 (202)
T ss_dssp TGGGC
T ss_pred CCcCC
Confidence 76544
No 94
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.75 E-value=3.1e-08 Score=94.29 Aligned_cols=102 Identities=21% Similarity=0.331 Sum_probs=80.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++. ++++.+|+.+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~---------------- 96 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE-GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKS---------------- 96 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH-TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHT----------------
T ss_pred CCeEEEEeCCCCHHHHHHHhC-CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhh----------------
Confidence 579999999999999888876 67899999999999999876 78999999998643
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++.- ....+ +++ .-..+++.+++.|+|||.+++.....
T Consensus 97 ------------~~~~~fD~i~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 97 ------------LPDKYLDGVMISH----FVEHL--DPE--RLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp ------------SCTTCBSEEEEES----CGGGS--CGG--GHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred ------------cCCCCeeEEEECC----chhhC--CcH--HHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 1457899999831 10001 111 12789999999999999999987665
No 95
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.75 E-value=6.1e-08 Score=100.06 Aligned_cols=115 Identities=22% Similarity=0.245 Sum_probs=86.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+......+|++||+++.+++.|++.+.... +++++++.+|+.+++.....
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~------------ 285 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQK------------ 285 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHH------------
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHh------------
Confidence 46999999999999998887633599999999999999998875432 23799999999999865432
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-----ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-----VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-----~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|...-. . .+... .-.+++..+.+.|+|||++++...+.
T Consensus 286 --------------~~~~fD~Vi~dpP~~~----~--~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 286 --------------KGEKFDIVVLDPPAFV----Q--HEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp --------------TTCCEEEEEECCCCSC----S--SGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred --------------hCCCCCEEEECCCCCC----C--CHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 3567999999742100 0 00011 13578899999999999988766554
No 96
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.75 E-value=6.1e-08 Score=93.34 Aligned_cols=97 Identities=20% Similarity=0.183 Sum_probs=77.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..|.+. +.+|++||+++.+++.|++.+. +++++++|+.++-
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~------------------ 106 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS-FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFS------------------ 106 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT-SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCC------------------
T ss_pred CCcEEEeCCcCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCC------------------
Confidence 579999999999999888876 5699999999999999999864 7899999987641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC----ChHHHHHHHHHccCcCcEEEEEe
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF----VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f----~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++..+. . ..+ ....+++.+++.|+|||.+++..
T Consensus 107 -------------~~~~fD~v~~~~~~---l-------~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 107 -------------LGRRFSAVTCMFSS---I-------GHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp -------------CSCCEEEEEECTTG---G-------GGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred -------------ccCCcCEEEEcCch---h-------hhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 25689999983211 0 112 22578999999999999999864
No 97
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.75 E-value=4.4e-08 Score=92.26 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=77.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+.. .+|+++|+++.+++.|++.+ ++++++.+|..++-
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~------------------ 96 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEF-GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFR------------------ 96 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHH-SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCC------------------
T ss_pred CCeEEEecccCCHHHHHHHHhC-CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHcc------------------
Confidence 5799999999999998888764 39999999999999999885 46899999986541
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++-... ...+.. +. ....+++.+++.|+|||.+++.....
T Consensus 97 -------------~~~~~D~v~~~~~~---~~~~~~-~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 97 -------------LGRKFSAVVSMFSS---VGYLKT-TE--ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp -------------CSSCEEEEEECTTG---GGGCCS-HH--HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred -------------cCCCCcEEEEcCch---HhhcCC-HH--HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 24579999962111 000100 01 22689999999999999999876544
No 98
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.75 E-value=1.4e-07 Score=84.60 Aligned_cols=113 Identities=16% Similarity=0.103 Sum_probs=87.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+ ...+++++|+++.+++.|++.+....-++++++.+|+.+.+
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------------------ 96 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVL------------------ 96 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHG------------------
T ss_pred CCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccc------------------
Confidence 56999999999999998887 67899999999999999998864222257999999998843
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
...+||+|+++.. -....+++.+++. |||.+++..... .....+.+.++
T Consensus 97 -------------~~~~~D~i~~~~~--------------~~~~~~l~~~~~~--~gG~l~~~~~~~--~~~~~~~~~l~ 145 (183)
T 2yxd_A 97 -------------DKLEFNKAFIGGT--------------KNIEKIIEILDKK--KINHIVANTIVL--ENAAKIINEFE 145 (183)
T ss_dssp -------------GGCCCSEEEECSC--------------SCHHHHHHHHHHT--TCCEEEEEESCH--HHHHHHHHHHH
T ss_pred -------------cCCCCcEEEECCc--------------ccHHHHHHHHhhC--CCCEEEEEeccc--ccHHHHHHHHH
Confidence 2357999999532 1347899999988 999999877544 33455666776
Q ss_pred Hhc
Q 038592 423 DVF 425 (478)
Q Consensus 423 ~vF 425 (478)
+.-
T Consensus 146 ~~g 148 (183)
T 2yxd_A 146 SRG 148 (183)
T ss_dssp HTT
T ss_pred HcC
Confidence 663
No 99
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.74 E-value=1.3e-08 Score=99.72 Aligned_cols=113 Identities=18% Similarity=0.179 Sum_probs=86.9
Q ss_pred CCeEEEEeCchhHHHHHHHhh-C-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-L-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+||.+|+|.|.++..+.+. . +.+|++||+++.+++.|++.+... ..++++++.+|+.+++
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~--------------- 175 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI--------------- 175 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC---------------
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccC---------------
Confidence 469999999999999998886 3 689999999999999999887432 2467999999987632
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
.+.+||+|++|+.+ ...+++.+++.|+|||.+++...+. .....+.+
T Consensus 176 ----------------~~~~fD~Vi~~~~~---------------~~~~l~~~~~~LkpgG~l~i~~~~~--~~~~~~~~ 222 (275)
T 1yb2_A 176 ----------------SDQMYDAVIADIPD---------------PWNHVQKIASMMKPGSVATFYLPNF--DQSEKTVL 222 (275)
T ss_dssp ----------------CSCCEEEEEECCSC---------------GGGSHHHHHHTEEEEEEEEEEESSH--HHHHHHHH
T ss_pred ----------------cCCCccEEEEcCcC---------------HHHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHH
Confidence 34679999995421 1468999999999999999877543 22334445
Q ss_pred HHHH
Q 038592 420 EFRD 423 (478)
Q Consensus 420 ~l~~ 423 (478)
.+++
T Consensus 223 ~l~~ 226 (275)
T 1yb2_A 223 SLSA 226 (275)
T ss_dssp HSGG
T ss_pred HHHH
Confidence 5544
No 100
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.74 E-value=2.3e-08 Score=98.66 Aligned_cols=109 Identities=18% Similarity=0.162 Sum_probs=83.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+.-. ..++++++.+|..++
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------------ 134 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF------------------ 134 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC------------------
T ss_pred cCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc------------------
Confidence 4699999999999999998876689999999999999999886421 235899999998654
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCC----CCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAP----PVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~P----p~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
+.+||+|+... ....+..| +.. .-..+++.+++.|+|||.+++.....
T Consensus 135 ---------------~~~fD~v~~~~----~~~~~~d~~~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~ 186 (302)
T 3hem_A 135 ---------------DEPVDRIVSLG----AFEHFADGAGDAGFE-RYDTFFKKFYNLTPDDGRMLLHTITI 186 (302)
T ss_dssp ---------------CCCCSEEEEES----CGGGTTCCSSCCCTT-HHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred ---------------CCCccEEEEcc----hHHhcCccccccchh-HHHHHHHHHHHhcCCCcEEEEEEEec
Confidence 35699999841 11111111 111 23689999999999999999977655
No 101
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.74 E-value=3.3e-08 Score=94.47 Aligned_cols=103 Identities=12% Similarity=0.105 Sum_probs=81.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+.- ...++++++++|+.++-
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------------- 109 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP----------------- 109 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-----------------
Confidence 469999999999999999988766999999999999999987632 12457999999985430
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
..+.+||+|++.-- + .++-...+++.+++.|+|||.+++..
T Consensus 110 -------------~~~~~fD~v~~~~~-------l----~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 110 -------------FQNEELDLIWSEGA-------I----YNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp -------------SCTTCEEEEEEESC-------S----CCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -------------CCCCCEEEEEecCh-------H----hhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 14578999998521 1 11234789999999999999999865
No 102
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.74 E-value=1.4e-07 Score=91.40 Aligned_cols=141 Identities=18% Similarity=0.215 Sum_probs=102.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|+|.++..|.+.. ..+|.+||++|.+++.|++... ..+++..+.+|+...-.-
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~--~~~ni~~V~~d~~~p~~~-------------- 141 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR--DRRNIFPILGDARFPEKY-------------- 141 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST--TCTTEEEEESCTTCGGGG--------------
T ss_pred CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH--hhcCeeEEEEeccCcccc--------------
Confidence 4699999999999999999874 5799999999999999998764 346789999987653110
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC-------CchH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP-------NRSF 413 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~-------~~~~ 413 (478)
......+|+|+.|+...+ ....++.++++.|+|||.+++-+..+ ....
T Consensus 142 -------------~~~~~~vDvVf~d~~~~~------------~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~ 196 (233)
T 4df3_A 142 -------------RHLVEGVDGLYADVAQPE------------QAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEV 196 (233)
T ss_dssp -------------TTTCCCEEEEEECCCCTT------------HHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHH
T ss_pred -------------ccccceEEEEEEeccCCh------------hHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHH
Confidence 124567999999864321 23679999999999999999865433 3345
Q ss_pred HHHHHHHHHHh-cCccEEEeecc--cceEEEEEE
Q 038592 414 YDMLIQEFRDV-FQELYEIDVGN--EENFVLIAT 444 (478)
Q Consensus 414 ~~~v~~~l~~v-F~~v~~~~v~~--~~N~Vl~a~ 444 (478)
+++.++.|++. |.-+-.+.... ..+.++|+.
T Consensus 197 ~~~ev~~L~~~GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 197 YKREIKTLMDGGLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp HHHHHHHHHHTTCCEEEEEECTTTSTTEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEEccCCCCCceEEEEEE
Confidence 56667777765 76555555432 335555553
No 103
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.74 E-value=5e-08 Score=94.70 Aligned_cols=119 Identities=20% Similarity=0.194 Sum_probs=88.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+. +.+|++||+||.+++.|++.+....-. ++++.+|..+.+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~-g~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~------------------ 180 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKL-GGKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAAL------------------ 180 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHG------------------
T ss_pred CCEEEEecCCCcHHHHHHHHh-CCeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcC------------------
Confidence 579999999999999888875 349999999999999999876432222 899999998853
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
...+||+|+.+... + .-..++..+++.|+|||.+++.-... ...+.+.+.++
T Consensus 181 -------------~~~~fD~Vv~n~~~------------~-~~~~~l~~~~~~LkpgG~lils~~~~--~~~~~v~~~l~ 232 (254)
T 2nxc_A 181 -------------PFGPFDLLVANLYA------------E-LHAALAPRYREALVPGGRALLTGILK--DRAPLVREAMA 232 (254)
T ss_dssp -------------GGCCEEEEEEECCH------------H-HHHHHHHHHHHHEEEEEEEEEEEEEG--GGHHHHHHHHH
T ss_pred -------------cCCCCCEEEECCcH------------H-HHHHHHHHHHHHcCCCCEEEEEeecc--CCHHHHHHHHH
Confidence 23579999986311 1 12679999999999999999854333 22455666676
Q ss_pred Hh-cCccE
Q 038592 423 DV-FQELY 429 (478)
Q Consensus 423 ~v-F~~v~ 429 (478)
+. |..+.
T Consensus 233 ~~Gf~~~~ 240 (254)
T 2nxc_A 233 GAGFRPLE 240 (254)
T ss_dssp HTTCEEEE
T ss_pred HCCCEEEE
Confidence 65 65433
No 104
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.73 E-value=4.3e-08 Score=101.28 Aligned_cols=140 Identities=24% Similarity=0.176 Sum_probs=97.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+. +.+|++||+|+.+++.|++.+... .-.++++.+|+.++..
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~-g~~V~gvDis~~al~~A~~n~~~~-~~~v~~~~~D~~~~~~----------------- 294 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEAN-ALKAQALHSDVDEALT----------------- 294 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHT-TCEEEEEESBHHHHHHHHHHHHHT-TCCCEEEECSTTTTSC-----------------
T ss_pred CCEEEEEeeeCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHc-CCCeEEEEcchhhccc-----------------
Confidence 469999999999999988876 679999999999999999886432 1238999999987631
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
...+||+|+++.--.. +.... .-....+++.+++.|+|||.+++-.... .. .-..+.
T Consensus 295 -------------~~~~fD~Ii~npp~~~---~~~~~--~~~~~~~l~~~~~~LkpGG~l~iv~n~~-l~----~~~~l~ 351 (381)
T 3dmg_A 295 -------------EEARFDIIVTNPPFHV---GGAVI--LDVAQAFVNVAAARLRPGGVFFLVSNPF-LK----YEPLLE 351 (381)
T ss_dssp -------------TTCCEEEEEECCCCCT---TCSSC--CHHHHHHHHHHHHHEEEEEEEEEEECTT-SC----HHHHHH
T ss_pred -------------cCCCeEEEEECCchhh---ccccc--HHHHHHHHHHHHHhcCcCcEEEEEEcCC-CC----hHHHHH
Confidence 2468999999531110 00000 0123689999999999999999865433 22 234577
Q ss_pred HhcCccEEEeecccceEEEEEEcC
Q 038592 423 DVFQELYEIDVGNEENFVLIATGL 446 (478)
Q Consensus 423 ~vF~~v~~~~v~~~~N~Vl~a~~~ 446 (478)
+.|..+..+ .+..=.|+-+.+.
T Consensus 352 ~~f~~v~~l--~~~gF~Vl~a~~~ 373 (381)
T 3dmg_A 352 EKFGAFQTL--KVAEYKVLFAEKR 373 (381)
T ss_dssp HHHSCCEEE--EESSSEEEEEECC
T ss_pred HhhccEEEE--eCCCEEEEEEEEe
Confidence 889988777 3323345555443
No 105
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.73 E-value=3.3e-08 Score=97.93 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=80.5
Q ss_pred CCeEEEEeCchhHHHHHHH--hhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLR--TQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~--~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|..+..+. ..++.+|++||+++.+++.|++.+... ..++++++.+|+.++-
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------------- 183 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLD--------------- 183 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCC---------------
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCC---------------
Confidence 5799999999999998884 345789999999999999999987533 2457999999988641
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|++.. . +..-|..-....+++.+++.|+|||.+++....
T Consensus 184 ----------------~~~~fD~v~~~~--~-----~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 184 ----------------TREGYDLLTSNG--L-----NIYEPDDARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp ----------------CCSCEEEEECCS--S-----GGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ----------------ccCCeEEEEECC--h-----hhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 237899999731 0 000011111234899999999999999987754
No 106
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.73 E-value=3.1e-08 Score=94.71 Aligned_cols=106 Identities=14% Similarity=0.163 Sum_probs=83.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+... ++++++++|+.+.-
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~------------------ 115 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKE------------------ 115 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCC------------------
T ss_pred CCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCC------------------
Confidence 5699999999999999998866789999999999999999987643 78999999987540
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
..+.+||+|+..- ....+ |+. .-..+++.+++.|+|||.+++....
T Consensus 116 ------------~~~~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 116 ------------FPENNFDLIYSRD----AILAL--SLE--NKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp ------------CCTTCEEEEEEES----CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ------------CCCCcEEEEeHHH----HHHhc--ChH--HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 1467899999841 10001 111 2378999999999999999986543
No 107
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.73 E-value=3.5e-08 Score=92.35 Aligned_cols=103 Identities=16% Similarity=0.087 Sum_probs=78.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCC-----CCCeEEEEchHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLED-----GEFLQVSVGDAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~-----d~rl~v~v~Dg~~~l~~~~~~~~~~~~ 336 (478)
+.+||.||+|.|.++..+.+.. ..+|++||+++.+++.|++.+.... .++++++.+|.... .
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~----------- 97 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQ-D----------- 97 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSC-C-----------
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccc-c-----------
Confidence 5799999999999999998875 4799999999999999999875332 13899999996311 0
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCC---hHHHHHHHHHccCcCcEEEEEe
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFV---RKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~---~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....+||+|++.- . + ..+- -..+++.+++.|+|||++++..
T Consensus 98 ------------------~~~~~fD~v~~~~----~---l----~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 98 ------------------KRFHGYDAATVIE----V---I----EHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ------------------GGGCSCSEEEEES----C---G----GGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ------------------ccCCCcCEEeeHH----H---H----HcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 1346799999731 1 0 1121 1589999999999999887643
No 108
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.72 E-value=1.9e-08 Score=94.86 Aligned_cols=101 Identities=14% Similarity=0.048 Sum_probs=80.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. ..+|++||+++.+++.|++.+.. +++++++|+.++.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~------------------ 99 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEH-FNDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQ------------------ 99 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTT-CSCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCC------------------
T ss_pred CCcEEEECCCCCHHHHHHHHh-CCcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcC------------------
Confidence 568999999999999988875 35899999999999999998753 7999999987651
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHH-HccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAAR-LILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~-~~L~~~Gilv~N~~~~ 409 (478)
.+.+||+|++-- ....+ + -...+|+.++ +.|+|||.+++.....
T Consensus 100 -------------~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 100 -------------LPRRYDNIVLTH----VLEHI---D---DPVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp -------------CSSCEEEEEEES----CGGGC---S---SHHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred -------------cCCcccEEEEhh----HHHhh---c---CHHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 456799999831 10011 1 1268999999 9999999999977554
No 109
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.72 E-value=2.9e-08 Score=94.34 Aligned_cols=117 Identities=18% Similarity=0.128 Sum_probs=87.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||++|+|.|.++..+.+. ..+|+++|+++.+++.|++.+.. ..+++++++.+|..+..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------------- 153 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAE----------------- 153 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSC-----------------
T ss_pred CCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcc-----------------
Confidence 469999999999999988887 78999999999999999987632 12367999999987542
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
.....||+|+.|.. ....+++.+.+.|+|||.+++...+. +....+...+
T Consensus 154 -------------~~~~~~D~v~~~~~---------------~~~~~l~~~~~~L~~gG~l~~~~~~~--~~~~~~~~~l 203 (248)
T 2yvl_A 154 -------------VPEGIFHAAFVDVR---------------EPWHYLEKVHKSLMEGAPVGFLLPTA--NQVIKLLESI 203 (248)
T ss_dssp -------------CCTTCBSEEEECSS---------------CGGGGHHHHHHHBCTTCEEEEEESSH--HHHHHHHHHS
T ss_pred -------------cCCCcccEEEECCc---------------CHHHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHHHH
Confidence 02357999999532 11468899999999999999877654 2334445555
Q ss_pred HHhcCc
Q 038592 422 RDVFQE 427 (478)
Q Consensus 422 ~~vF~~ 427 (478)
++.|..
T Consensus 204 ~~~f~~ 209 (248)
T 2yvl_A 204 ENYFGN 209 (248)
T ss_dssp TTTEEE
T ss_pred HhhCCc
Confidence 544543
No 110
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.72 E-value=9e-09 Score=101.40 Aligned_cols=117 Identities=16% Similarity=0.129 Sum_probs=89.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+....+|++||++|.+++.|++.+... -+++++++.+|+.++.
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~----------------- 188 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP----------------- 188 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------------
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhc-----------------
Confidence 4699999999999999888875348999999999999999876432 2356999999998773
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC----CchHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP----NRSFYDML 417 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~----~~~~~~~v 417 (478)
...+||+|++|. |. ...+++..+.+.|+|||++++...++ .....+.+
T Consensus 189 --------------~~~~fD~Vi~~~------------p~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i 240 (278)
T 2frn_A 189 --------------GENIADRILMGY------------VV--RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETF 240 (278)
T ss_dssp --------------CCSCEEEEEECC------------CS--SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHH
T ss_pred --------------ccCCccEEEECC------------ch--hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHH
Confidence 356799999952 21 23679999999999999999855443 23445555
Q ss_pred HHHHHHh
Q 038592 418 IQEFRDV 424 (478)
Q Consensus 418 ~~~l~~v 424 (478)
.+.+++.
T Consensus 241 ~~~~~~~ 247 (278)
T 2frn_A 241 KRITKEY 247 (278)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 5555554
No 111
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.71 E-value=1.1e-07 Score=88.32 Aligned_cols=122 Identities=15% Similarity=0.123 Sum_probs=88.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+ +++++.+|..+.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~------------------- 97 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA-GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQL------------------- 97 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGC-------------------
T ss_pred CCcEEEECCCCCHHHHHHHHc-CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccC-------------------
Confidence 569999999999999988876 679999999999999999987 356777887543
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCc-----------
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNR----------- 411 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~----------- 411 (478)
....+||+|++.- . +..-+.. .-..+++.+++.|+|||.+++.+.....
T Consensus 98 ------------~~~~~fD~v~~~~----~---l~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 157 (211)
T 3e23_A 98 ------------DAIDAYDAVWAHA----C---LLHVPRD-ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYN 157 (211)
T ss_dssp ------------CCCSCEEEEEECS----C---GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEEC
T ss_pred ------------CCCCcEEEEEecC----c---hhhcCHH-HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhcc
Confidence 1457899999831 0 1000100 1257999999999999999987654321
Q ss_pred -hHHHHHHHHHHHh--cCccEE
Q 038592 412 -SFYDMLIQEFRDV--FQELYE 430 (478)
Q Consensus 412 -~~~~~v~~~l~~v--F~~v~~ 430 (478)
--.+.+.+.+++. |..+..
T Consensus 158 ~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 158 YPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp CCCHHHHHHHHHHHCCCSEEEE
T ss_pred CCCHHHHHHHHHhCCCcEEEEE
Confidence 1245566667765 775543
No 112
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.71 E-value=6.1e-08 Score=90.11 Aligned_cols=103 Identities=24% Similarity=0.331 Sum_probs=80.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.+|++||+++.+++.|++. .+++++.+|..++....
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~--------------- 110 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR-GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAK--------------- 110 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTC---------------
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccc---------------
Confidence 579999999999999988877 77999999999999999987 45778999988763210
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
.....+||+|++... +. .+ --..+++.+++.|+|||.+++....+
T Consensus 111 -----------~~~~~~fD~v~~~~~-------l~-~~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 111 -----------VPVGKDYDLICANFA-------LL-HQ---DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp -----------SCCCCCEEEEEEESC-------CC-SS---CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -----------cccCCCccEEEECch-------hh-hh---hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 013456999998421 11 01 22689999999999999999977543
No 113
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.70 E-value=3.3e-08 Score=90.31 Aligned_cols=102 Identities=15% Similarity=0.176 Sum_probs=77.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+....-++++++.+|..++-
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------------------ 93 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAAN-GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLT------------------ 93 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCC------------------
T ss_pred CCeEEEEcCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCC------------------
Confidence 569999999999999988877 7799999999999999998764222246999999987641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
...+||+|+....- ..+ ++. ....+++.+++.|+|||.+++
T Consensus 94 -------------~~~~~D~v~~~~~l----~~~--~~~--~~~~~l~~~~~~L~~gG~l~~ 134 (199)
T 2xvm_A 94 -------------FDRQYDFILSTVVL----MFL--EAK--TIPGLIANMQRCTKPGGYNLI 134 (199)
T ss_dssp -------------CCCCEEEEEEESCG----GGS--CGG--GHHHHHHHHHHTEEEEEEEEE
T ss_pred -------------CCCCceEEEEcchh----hhC--CHH--HHHHHHHHHHHhcCCCeEEEE
Confidence 25679999984210 000 111 237899999999999999765
No 114
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.70 E-value=7e-08 Score=96.87 Aligned_cols=132 Identities=20% Similarity=0.197 Sum_probs=91.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|..+..|.+.. ..+|+++|+++.+++.|++.+....-++++++.+|+.++..
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~--------------- 183 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE--------------- 183 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG---------------
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc---------------
Confidence 4699999999999999888875 37999999999999999987632112369999999987631
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCC-CCCCCCC-------------ChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGT-SAPPVEF-------------VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~-s~Pp~~f-------------~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++|+..+.. |+ .--|... ....+|+.+.+.|+|||.+++..
T Consensus 184 ---------------~~~~fD~Il~d~Pcsg~--g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 184 ---------------LNVEFDKILLDAPCTGS--GTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp ---------------GCCCEEEEEEECCTTST--TTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------------ccccCCEEEEeCCCCCc--ccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 23579999999753311 21 1112110 12589999999999999999877
Q ss_pred CCCCchHHHHHHHHHHHhcC
Q 038592 407 IPPNRSFYDMLIQEFRDVFQ 426 (478)
Q Consensus 407 ~~~~~~~~~~v~~~l~~vF~ 426 (478)
.+..++.-..++..+.+-++
T Consensus 247 cs~~~~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 247 CSLEPEENEFVIQWALDNFD 266 (315)
T ss_dssp SCCCGGGTHHHHHHHHHHSS
T ss_pred CCCChHHhHHHHHHHHhcCC
Confidence 66544333444444444344
No 115
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.70 E-value=6.6e-08 Score=92.94 Aligned_cols=102 Identities=21% Similarity=0.336 Sum_probs=77.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..|.+.. .+|++||+++.+++.|++.+.-..-++++++++|+.++-
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~------------------ 98 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP------------------ 98 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC------------------
T ss_pred CCEEEEEeCCCCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC------------------
Confidence 5799999999999999888764 499999999999999998763222257999999986530
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
..+..||+|+....- ..+ + -...+|+.+++.|+|||.+++-
T Consensus 99 ------------~~~~~fD~V~~~~~l----~~~---~---d~~~~l~~~~r~LkpgG~l~~~ 139 (260)
T 1vl5_A 99 ------------FTDERFHIVTCRIAA----HHF---P---NPASFVSEAYRVLKKGGQLLLV 139 (260)
T ss_dssp ------------SCTTCEEEEEEESCG----GGC---S---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------CCCCCEEEEEEhhhh----Hhc---C---CHHHHHHHHHHHcCCCCEEEEE
Confidence 145789999984210 001 1 1368999999999999999874
No 116
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.70 E-value=5.7e-08 Score=92.76 Aligned_cols=101 Identities=16% Similarity=0.134 Sum_probs=80.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.||+|.|.++..+.+.. +.+|++||+++.+++.|++. .++++++++|+.++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~----------------- 91 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK----------------- 91 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-----------------
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-----------------
Confidence 5799999999999999888874 68999999999999999987 257899999976541
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++... ...+ + -...+++.+++.|+|||.+++.....
T Consensus 92 --------------~~~~fD~v~~~~~----l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 92 --------------PAQKADLLYANAV----FQWV---P---DHLAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp --------------CSSCEEEEEEESC----GGGS---T---THHHHHHHHGGGEEEEEEEEEEEECC
T ss_pred --------------ccCCcCEEEEeCc----hhhC---C---CHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 3467999998421 0001 1 23789999999999999999987544
No 117
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.70 E-value=1.7e-08 Score=99.55 Aligned_cols=108 Identities=19% Similarity=0.258 Sum_probs=82.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC---CCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED---GEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~---d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
+.+||.||+|.|.++..|.+. +.+|++||+++.+++.|++.+.... ..+++++++|+.++
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~---------------- 145 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL-GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF---------------- 145 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT-TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC----------------
T ss_pred CCcEEEEeccCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC----------------
Confidence 459999999999999888876 6799999999999999998875321 15799999998764
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++.... . .. .+.. ....+|+.+++.|+|||.|++.+..+
T Consensus 146 ---------------~~~~~fD~v~~~~~~---~-~~--~~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 146 ---------------ALDKRFGTVVISSGS---I-NE--LDEA-DRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp ---------------CCSCCEEEEEECHHH---H-TT--SCHH-HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ---------------CcCCCcCEEEECCcc---c-cc--CCHH-HHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 135679999872110 0 00 0100 12789999999999999999988776
No 118
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.70 E-value=2.6e-08 Score=98.46 Aligned_cols=44 Identities=23% Similarity=0.330 Sum_probs=39.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+||.||+|.|.++..|...+ +.+|++||+|+.+++.|++...
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~ 91 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIR 91 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence 5799999999999999999886 6899999999999999998753
No 119
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.69 E-value=6.7e-08 Score=93.93 Aligned_cols=114 Identities=20% Similarity=0.198 Sum_probs=88.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC---CCCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE---DGEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~---~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.+|+|.|.++..+.+.. ..+|+++|+++.+++.|++.+... ..++++++.+|+.+..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~------------- 166 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE------------- 166 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC-------------
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC-------------
Confidence 4699999999999999988863 589999999999999999886321 1357999999987541
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHH
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDML 417 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 417 (478)
.....||+|++|+.+ ..++++.+.+.|+|||.+++...+. +....+
T Consensus 167 -----------------~~~~~~D~v~~~~~~---------------~~~~l~~~~~~L~pgG~l~~~~~~~--~~~~~~ 212 (280)
T 1i9g_A 167 -----------------LPDGSVDRAVLDMLA---------------PWEVLDAVSRLLVAGGVLMVYVATV--TQLSRI 212 (280)
T ss_dssp -----------------CCTTCEEEEEEESSC---------------GGGGHHHHHHHEEEEEEEEEEESSH--HHHHHH
T ss_pred -----------------CCCCceeEEEECCcC---------------HHHHHHHHHHhCCCCCEEEEEeCCH--HHHHHH
Confidence 134579999996421 1368999999999999999887654 334556
Q ss_pred HHHHHH
Q 038592 418 IQEFRD 423 (478)
Q Consensus 418 ~~~l~~ 423 (478)
+..+++
T Consensus 213 ~~~l~~ 218 (280)
T 1i9g_A 213 VEALRA 218 (280)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666765
No 120
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.69 E-value=8.6e-08 Score=93.36 Aligned_cols=100 Identities=24% Similarity=0.301 Sum_probs=79.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+ .+.+|++||+++.+++.|++.+ ++++++++|+.++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~------------------- 112 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNF------------------- 112 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTC-------------------
T ss_pred CCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhC-------------------
Confidence 56999999999999998887 6789999999999999999886 5688999998653
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++.-- ...+ + -...+++.+++.|+|||.+++.....
T Consensus 113 ------------~~~~~fD~v~~~~~----l~~~---~---d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 113 ------------RVDKPLDAVFSNAM----LHWV---K---EPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp ------------CCSSCEEEEEEESC----GGGC---S---CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------CcCCCcCEEEEcch----hhhC---c---CHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 12457999998421 0001 1 23689999999999999999877655
No 121
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.69 E-value=5.9e-08 Score=94.69 Aligned_cols=106 Identities=19% Similarity=0.128 Sum_probs=81.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+.-. ..++++++.+|..++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~------------------ 126 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF------------------ 126 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC------------------
T ss_pred cCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC------------------
Confidence 5699999999999999888655779999999999999999876422 246899999998533
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
+ .+||+|+..- ....+ ++. .-..+++.+++.|+|||.+++.....
T Consensus 127 --------------~-~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 127 --------------D-EPVDRIVSIG----AFEHF--GHE--RYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp --------------C-CCCSEEEEES----CGGGT--CTT--THHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred --------------C-CCeeEEEEeC----chhhc--ChH--HHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 3 6799999731 00001 111 23789999999999999999876543
No 122
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.69 E-value=2.8e-08 Score=91.77 Aligned_cols=111 Identities=20% Similarity=0.167 Sum_probs=82.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+....+|+++|+++.+++.|++.+.- .++++++.+|+.++ .
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~--~---------------- 102 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKL--D---------------- 102 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSC--C----------------
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcC--C----------------
Confidence 579999999999999888876434999999999999999998752 46899999998654 0
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCC---CCC-----C-ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAP---PVE-----F-VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~P---p~~-----f-~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+..||+|+....- ..+.|. |.. . ....+++.+++.|+|||.+++...+.
T Consensus 103 ------------~~~~~fD~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 103 ------------FPSASFDVVLEKGTL----DALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp ------------SCSSCEEEEEEESHH----HHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred ------------CCCCcccEEEECcch----hhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 135679999974210 000000 000 0 12789999999999999999877765
No 123
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.68 E-value=2.7e-08 Score=92.96 Aligned_cols=106 Identities=28% Similarity=0.343 Sum_probs=80.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+... +|++||+++.+++.|++.+... .++++++.+|..++-
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~------------------ 98 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR-ESNVEFIVGDARKLS------------------ 98 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCTTSCC------------------
T ss_pred CCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc-CCCceEEECchhcCC------------------
Confidence 57999999999999988887644 9999999999999999887432 267999999976530
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
....+||+|++.-. -. .. ... -...+++.+++.|+|||.+++....
T Consensus 99 ------------~~~~~~D~v~~~~~--~~---~~-~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 99 ------------FEDKTFDYVIFIDS--IV---HF-EPL--ELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ------------SCTTCEEEEEEESC--GG---GC-CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ------------CCCCcEEEEEEcCc--hH---hC-CHH--HHHHHHHHHHHHcCCCcEEEEEecC
Confidence 13568999998411 00 00 000 1267999999999999999987654
No 124
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.68 E-value=1.6e-07 Score=88.75 Aligned_cols=137 Identities=17% Similarity=0.196 Sum_probs=88.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHH----HHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLR----VARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~----vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.||+|+|.++..+.+.. ..+|++||++|.+++ .|++. +++.++++|+.+.... .
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~------~~v~~~~~d~~~~~~~--~-------- 121 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER------NNIIPLLFDASKPWKY--S-------- 121 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC------SSEEEECSCTTCGGGT--T--------
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC------CCeEEEEcCCCCchhh--c--------
Confidence 4699999999999999888876 479999999998654 44432 3688888887653100 0
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC-----C-C-
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP-----P-N- 410 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~-----~-~- 410 (478)
....+||+|++|+.. |. ....+++.+++.|+|||.|++.+.. + +
T Consensus 122 -----------------~~~~~fD~V~~~~~~----------~~--~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~ 172 (210)
T 1nt2_A 122 -----------------GIVEKVDLIYQDIAQ----------KN--QIEILKANAEFFLKEKGEVVIMVKARSIDSTAEP 172 (210)
T ss_dssp -----------------TTCCCEEEEEECCCS----------TT--HHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCH
T ss_pred -----------------ccccceeEEEEeccC----------hh--HHHHHHHHHHHHhCCCCEEEEEEecCCccccCCH
Confidence 023679999997411 21 2345699999999999999987521 1 1
Q ss_pred chHHHHHHHHHHHhcCccEEEeecc--cceEEEEEE
Q 038592 411 RSFYDMLIQEFRDVFQELYEIDVGN--EENFVLIAT 444 (478)
Q Consensus 411 ~~~~~~v~~~l~~vF~~v~~~~v~~--~~N~Vl~a~ 444 (478)
.+.....++.|++.|.-+-...... ..+.++++.
T Consensus 173 ~~~~~~~~~~l~~~f~~~~~~~~~p~~~~h~~~~~~ 208 (210)
T 1nt2_A 173 EEVFKSVLKEMEGDFKIVKHGSLMPYHRDHIFIHAY 208 (210)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEECTTTCTTEEEEEEE
T ss_pred HHHHHHHHHHHHhhcEEeeeecCCCCCCCcEEEEEE
Confidence 2222233445666676555554422 245556654
No 125
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.68 E-value=8.4e-08 Score=90.65 Aligned_cols=103 Identities=21% Similarity=0.289 Sum_probs=81.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.. ..++++++.+|+.++-
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~------------------ 111 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT-GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLP------------------ 111 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCS------------------
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCC------------------
Confidence 569999999999999988887 779999999999999999875 3478999999987541
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++.-. +...+ ....+++.+++.|+|||.+++....+
T Consensus 112 ------------~~~~~fD~v~~~~~-------l~~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 112 ------------FENEQFEAIMAINS-------LEWTE---EPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp ------------SCTTCEEEEEEESC-------TTSSS---CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ------------CCCCCccEEEEcCh-------Hhhcc---CHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 14678999998311 11011 23689999999999999999877544
No 126
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.68 E-value=5.6e-08 Score=97.79 Aligned_cols=117 Identities=18% Similarity=0.199 Sum_probs=85.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCC-------C----CCCCeEEEEchHHHHHHHHHh
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGL-------E----DGEFLQVSVGDAIEFLEKLAR 329 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~-------~----~d~rl~v~v~Dg~~~l~~~~~ 329 (478)
..+||.+|+|.|.++..+.+.. ..+|++||++|.+++.|++.+.. . ..++++++.+|+.+.+...
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~-- 183 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI-- 183 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc--
Confidence 4699999999999999988864 38999999999999999987641 1 1358999999998754221
Q ss_pred hhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 330 QIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....||+|++|..+ | ..++..+++.|+|||.+++...+
T Consensus 184 --------------------------~~~~fD~V~~~~~~---------~------~~~l~~~~~~LkpgG~lv~~~~~- 221 (336)
T 2b25_A 184 --------------------------KSLTFDAVALDMLN---------P------HVTLPVFYPHLKHGGVCAVYVVN- 221 (336)
T ss_dssp ------------------------------EEEEEECSSS---------T------TTTHHHHGGGEEEEEEEEEEESS-
T ss_pred --------------------------CCCCeeEEEECCCC---------H------HHHHHHHHHhcCCCcEEEEEeCC-
Confidence 23469999996421 1 12789999999999999976653
Q ss_pred CchHHHHHHHHHHHh
Q 038592 410 NRSFYDMLIQEFRDV 424 (478)
Q Consensus 410 ~~~~~~~v~~~l~~v 424 (478)
......+++.+++.
T Consensus 222 -~~~~~~~~~~l~~~ 235 (336)
T 2b25_A 222 -ITQVIELLDGIRTC 235 (336)
T ss_dssp -HHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhc
Confidence 33344556666653
No 127
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.68 E-value=1.1e-07 Score=98.59 Aligned_cols=110 Identities=17% Similarity=0.128 Sum_probs=79.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|+|.++..+... +.+|++||+++.+++.|++.+....-. .++.++|+.+++..
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~---------------- 276 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRG---------------- 276 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHT----------------
T ss_pred CCeEEEcccchhHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHH----------------
Confidence 469999999999999888875 556999999999999999886322111 25779999999854
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-----ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-----VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-----~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....||+|++|...-.. ..... .-.+++..+.+.|+|||.+++-..+.
T Consensus 277 -------------~~~~fD~Ii~dpP~f~~------~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 277 -------------LEGPFHHVLLDPPTLVK------RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp -------------CCCCEEEEEECCCCCCS------SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred -------------hcCCCCEEEECCCcCCC------CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 12339999997421000 00111 11578899999999999998655544
No 128
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.68 E-value=4.4e-08 Score=97.24 Aligned_cols=106 Identities=16% Similarity=0.091 Sum_probs=81.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+.-. ..++++++.+|..++
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------------ 152 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF------------------ 152 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC------------------
T ss_pred cCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC------------------
Confidence 5699999999999998888776789999999999999999876422 236799999997543
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
+ .+||+|++.- ....+ |+. .-..+++.+++.|+|||.+++.....
T Consensus 153 --------------~-~~fD~v~~~~----~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 153 --------------A-EPVDRIVSIE----AFEHF--GHE--NYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp --------------C-CCCSEEEEES----CGGGT--CGG--GHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred --------------C-CCcCEEEEeC----hHHhc--CHH--HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2 5799999841 00000 111 23789999999999999999877655
No 129
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.68 E-value=2.6e-08 Score=95.15 Aligned_cols=103 Identities=16% Similarity=0.114 Sum_probs=79.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+... ..++++++.+|+.+..
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 99 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV----------------- 99 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC-----------------
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC-----------------
Confidence 5699999999999999998877889999999999999999876321 2357999999987541
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
.+..||+|++-- .-.. .+ --..+|+.+++.|+|||.+++..
T Consensus 100 --------------~~~~fD~V~~~~-~~~~------~~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 100 --------------ANEKCDVAACVG-ATWI------AG---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp --------------CSSCEEEEEEES-CGGG------TS---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred --------------cCCCCCEEEECC-ChHh------cC---CHHHHHHHHHHHcCCCeEEEEec
Confidence 246799999821 1000 11 13789999999999999998853
No 130
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.68 E-value=7e-08 Score=102.06 Aligned_cols=133 Identities=16% Similarity=0.120 Sum_probs=95.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|+.+..|.+.. ..+|+++|+++..++.+++.+....-.++.++.+|+.++...
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~-------------- 171 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPH-------------- 171 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHH--------------
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhh--------------
Confidence 4699999999999998888764 379999999999999998765211123699999999988643
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCC-C--------CCC-----ChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAP-P--------VEF-----VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~P-p--------~~f-----~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....||+|++|+..+.. |+..- | ..+ ...++|..+.+.|+|||.+++.+
T Consensus 172 ---------------~~~~FD~Il~DaPCSg~--G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 172 ---------------FSGFFDRIVVDAPCSGE--GMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp ---------------HTTCEEEEEEECCCCCG--GGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------------ccccCCEEEECCCCCCc--cccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 24579999999854321 22100 1 110 23488999999999999999988
Q ss_pred CCCCchHHHHHHHHHHHhcC
Q 038592 407 IPPNRSFYDMLIQEFRDVFQ 426 (478)
Q Consensus 407 ~~~~~~~~~~v~~~l~~vF~ 426 (478)
.+..++--+.++..+.+-++
T Consensus 235 Cs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 235 CTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp SCCCGGGTHHHHHHHHHHSS
T ss_pred eecccccCHHHHHHHHHhCC
Confidence 77655545555666655554
No 131
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.67 E-value=7.6e-08 Score=91.95 Aligned_cols=102 Identities=24% Similarity=0.220 Sum_probs=80.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+ ....++++++++|+.++-
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~------------------ 99 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR-GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIP------------------ 99 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT-TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCC------------------
T ss_pred CCEEEEeCCcCCHHHHHHHHC-CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCC------------------
Confidence 579999999999999888876 679999999999999999987 233578999999986431
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
..+.+||+|++... +...+ -...+++.+++.|+|||.+++..
T Consensus 100 ------------~~~~~fD~v~~~~~-------l~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 141 (263)
T 2yqz_A 100 ------------LPDESVHGVIVVHL-------WHLVP---DWPKVLAEAIRVLKPGGALLEGW 141 (263)
T ss_dssp ------------SCTTCEEEEEEESC-------GGGCT---THHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------CCCCCeeEEEECCc-------hhhcC---CHHHHHHHHHHHCCCCcEEEEEe
Confidence 13567999998411 10011 23789999999999999998863
No 132
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.67 E-value=3.7e-08 Score=92.15 Aligned_cols=102 Identities=15% Similarity=0.137 Sum_probs=77.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCC-----CCCeEEEEchHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLED-----GEFLQVSVGDAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~-----d~rl~v~v~Dg~~~l~~~~~~~~~~~~ 336 (478)
+.+||.||+|.|.++..+.+.. ..+|++||+++.+++.|++.+.... .++++++.+|.... .
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~-~----------- 97 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYR-D----------- 97 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSC-C-----------
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccc-c-----------
Confidence 5799999999999999998875 4799999999999999999875321 13899999997221 0
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEE
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N 405 (478)
....+||+|++.- . -.++.. ..+++.+++.|+|||+++..
T Consensus 98 ------------------~~~~~fD~V~~~~----~-------l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 98 ------------------KRFSGYDAATVIE----V-------IEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp ------------------GGGTTCSEEEEES----C-------GGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred ------------------cccCCCCEEEEHH----H-------HHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 1346799999731 1 112222 48999999999999988764
No 133
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.67 E-value=4.2e-08 Score=95.06 Aligned_cols=104 Identities=19% Similarity=0.185 Sum_probs=81.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.. +.+|++||+++.+++.|++.+....-++++++.+|+.++.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~----------------- 100 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLP----------------- 100 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCC-----------------
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCC-----------------
Confidence 5799999999999999998876 6899999999999999998874333357999999987641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....+||+|++...-. .+ + -...+++.+++.|+|||.+++..
T Consensus 101 -------------~~~~~fD~v~~~~~l~----~~---~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 101 -------------FEDSSFDHIFVCFVLE----HL---Q---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp -------------SCTTCEEEEEEESCGG----GC---S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------------CCCCCeeEEEEechhh----hc---C---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 1457899999842110 01 1 12689999999999999999854
No 134
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.67 E-value=2.7e-08 Score=97.71 Aligned_cols=119 Identities=11% Similarity=0.016 Sum_probs=91.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+.. ..+|++||++|.+++.|++.+....-++++++.+|+.++ .
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~---------------- 182 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-E---------------- 182 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-C----------------
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-C----------------
Confidence 4699999999999999988875 579999999999999999876443334688999999876 2
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCc---hHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNR---SFYDMLI 418 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~---~~~~~v~ 418 (478)
...+||+|++|. |. -..+++..+.+.|+|||++++....... +.....+
T Consensus 183 --------------~~~~~D~Vi~d~------------p~--~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~ 234 (272)
T 3a27_A 183 --------------LKDVADRVIMGY------------VH--KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERL 234 (272)
T ss_dssp --------------CTTCEEEEEECC------------CS--SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHH
T ss_pred --------------ccCCceEEEECC------------cc--cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHH
Confidence 245799999973 22 2356899999999999999986655421 3345566
Q ss_pred HHHHHhcC
Q 038592 419 QEFRDVFQ 426 (478)
Q Consensus 419 ~~l~~vF~ 426 (478)
+.+.+.+.
T Consensus 235 ~~~~~~~~ 242 (272)
T 3a27_A 235 KFYAEKNG 242 (272)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhC
Confidence 67776653
No 135
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.66 E-value=3e-08 Score=93.93 Aligned_cols=106 Identities=23% Similarity=0.297 Sum_probs=81.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.||+|.|.++..|.+ .+.+|++||+++.+++.|++.+.-. ...+++++++|+.++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 128 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS-PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR----------------- 128 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB-TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-----------------
T ss_pred CCCEEEeCCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-----------------
Confidence 45999999999999988865 4679999999999999999987632 2357999999987641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|+.-.. ...+ |+. ....+++.+++.|+|||.+++....
T Consensus 129 --------------~~~~fD~v~~~~~----l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 129 --------------PTELFDLIFDYVF----FCAI--EPE--MRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp --------------CSSCEEEEEEESS----TTTS--CGG--GHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred --------------CCCCeeEEEEChh----hhcC--CHH--HHHHHHHHHHHHCCCCcEEEEEEec
Confidence 3458999997311 0001 111 3478999999999999999986554
No 136
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.66 E-value=4e-08 Score=100.78 Aligned_cols=106 Identities=11% Similarity=0.004 Sum_probs=78.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.+| |+|.++..+.... ..+|++||+||.+++.|++++....-.+++++.+|+.+++..
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~--------------- 236 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPD--------------- 236 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCT---------------
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchh---------------
Confidence 57999999 9999998888764 479999999999999999886311112799999999874311
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCc-EEEEEeCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFG-IFVMNVIP 408 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~G-ilv~N~~~ 408 (478)
....+||+|++|..-. +.. ...|++.+.+.|+||| ++++-+..
T Consensus 237 -------------~~~~~fD~Vi~~~p~~---------~~~--~~~~l~~~~~~LkpgG~~~~~~~~~ 280 (373)
T 2qm3_A 237 -------------YALHKFDTFITDPPET---------LEA--IRAFVGRGIATLKGPRCAGYFGITR 280 (373)
T ss_dssp -------------TTSSCBSEEEECCCSS---------HHH--HHHHHHHHHHTBCSTTCEEEEEECT
T ss_pred -------------hccCCccEEEECCCCc---------hHH--HHHHHHHHHHHcccCCeEEEEEEec
Confidence 0235799999963100 111 3789999999999999 54655554
No 137
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.66 E-value=1.9e-08 Score=94.76 Aligned_cols=104 Identities=16% Similarity=0.216 Sum_probs=79.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC------CEEEEEECChHHHHHHHHhcCCCC-----CCCeEEEEchHHHHHHHHHhhh
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD------FEVVGVEMDEVVLRVARQYFGLED-----GEFLQVSVGDAIEFLEKLARQI 331 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~------~~V~~VEiDp~Vl~vA~~~Fg~~~-----d~rl~v~v~Dg~~~l~~~~~~~ 331 (478)
..+||.||+|.|.++..+.+..+ .+|++||+++.+++.|++.+.... .++++++.+|+.+...+...
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-- 158 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKK-- 158 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHH--
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCc--
Confidence 46999999999999988888753 699999999999999998864221 35799999999874311000
Q ss_pred cCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 332 VGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|+++... .+ +++.+.+.|+|||.+++.+..
T Consensus 159 ------------------------~~~~fD~I~~~~~~-----------~~-----~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 159 ------------------------ELGLFDAIHVGASA-----------SE-----LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp ------------------------HHCCEEEEEECSBB-----------SS-----CCHHHHHHEEEEEEEEEEEEE
T ss_pred ------------------------cCCCcCEEEECCch-----------HH-----HHHHHHHhcCCCcEEEEEEcc
Confidence 13469999995311 12 347889999999999998865
No 138
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.65 E-value=5.4e-08 Score=95.04 Aligned_cols=103 Identities=13% Similarity=0.077 Sum_probs=79.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.+|+|.|.++..|.+. +.+|++||+++.+++.|++.+..... +++++.+|+.++.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~-g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------------------ 180 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLL-GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAAN------------------ 180 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCC------------------
T ss_pred CCcEEEECCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEecccccc------------------
Confidence 579999999999999998877 67999999999999999987643222 7999999987641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++... .. ..++. ....+++.+++.|+|||.+++..
T Consensus 181 -------------~~~~fD~i~~~~~----~~--~~~~~--~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 181 -------------IQENYDFIVSTVV----FM--FLNRE--RVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp -------------CCSCEEEEEECSS----GG--GSCGG--GHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------ccCCccEEEEccc----hh--hCCHH--HHHHHHHHHHHhcCCCcEEEEEE
Confidence 2567999999421 00 00111 23589999999999999977643
No 139
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.64 E-value=4.6e-08 Score=95.59 Aligned_cols=114 Identities=17% Similarity=0.181 Sum_probs=87.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+||.+|+|.|.++..+.+.. ..+|+++|+++.+++.|++.+... ..++++++.+|..+++
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------------- 177 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGF--------------- 177 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCC---------------
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcc---------------
Confidence 4699999999999999988874 579999999999999999886321 1357999999987652
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
....||+|++|... ...+++.+.+.|+|||.+++...+. .....+.+
T Consensus 178 ----------------~~~~~D~V~~~~~~---------------~~~~l~~~~~~L~pgG~l~~~~~~~--~~~~~~~~ 224 (277)
T 1o54_A 178 ----------------DEKDVDALFLDVPD---------------PWNYIDKCWEALKGGGRFATVCPTT--NQVQETLK 224 (277)
T ss_dssp ----------------SCCSEEEEEECCSC---------------GGGTHHHHHHHEEEEEEEEEEESSH--HHHHHHHH
T ss_pred ----------------cCCccCEEEECCcC---------------HHHHHHHHHHHcCCCCEEEEEeCCH--HHHHHHHH
Confidence 34579999996311 1468999999999999999877543 22345566
Q ss_pred HHHHh
Q 038592 420 EFRDV 424 (478)
Q Consensus 420 ~l~~v 424 (478)
.|++.
T Consensus 225 ~l~~~ 229 (277)
T 1o54_A 225 KLQEL 229 (277)
T ss_dssp HHHHS
T ss_pred HHHHC
Confidence 66653
No 140
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.64 E-value=7e-08 Score=90.35 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=81.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-----CCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-----GEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-----d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.||+|.|.++..+... +.+|++||+++.+++.|++.+.... ..+++++.+|+.++-
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~------------- 96 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS------------- 96 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-------------
T ss_pred CCeEEEECCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-------------
Confidence 579999999999999988877 7799999999999999999875321 246899999976431
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++... +...+..-....+++.+++.|+|||.+++....+
T Consensus 97 -----------------~~~~~~D~v~~~~~-------l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 97 -----------------FHDSSFDFAVMQAF-------LTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp -----------------SCTTCEEEEEEESC-------GGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -----------------CCCCceeEEEEcch-------hhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 14578999998421 1101111012279999999999999999876544
No 141
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.64 E-value=4e-08 Score=92.80 Aligned_cols=107 Identities=23% Similarity=0.293 Sum_probs=80.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. .+|++||+++.+++.|++.+... ..+++++.+|..++-
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~------------------ 92 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMET-NRHVDFWVQDMRELE------------------ 92 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHT-TCCCEEEECCGGGCC------------------
T ss_pred CCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhc-CCceEEEEcChhhcC------------------
Confidence 469999999999999888876 89999999999999999876422 257899999976541
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++..+.-.. + ++. -....+++.+++.|+|||.+++.+.++
T Consensus 93 -------------~~~~fD~v~~~~~~~~~---~--~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 140 (243)
T 3d2l_A 93 -------------LPEPVDAITILCDSLNY---L--QTE-ADVKQTFDSAARLLTDGGKLLFDVHSP 140 (243)
T ss_dssp -------------CSSCEEEEEECTTGGGG---C--CSH-HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred -------------CCCCcCEEEEeCCchhh---c--CCH-HHHHHHHHHHHHhcCCCeEEEEEcCCH
Confidence 23679999984211100 0 000 023678999999999999999877654
No 142
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.64 E-value=1.3e-07 Score=90.13 Aligned_cols=102 Identities=19% Similarity=0.276 Sum_probs=77.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+.. .+|++||+++.+++.|++.+....-++++++.+|+.++-
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------------------ 82 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYV-QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP------------------ 82 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC------------------
T ss_pred CCEEEEEccCcCHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC------------------
Confidence 5799999999999998888764 599999999999999998763222247999999975430
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
..+..||+|++..-- ..+ + --..+++.+++.|+|||.+++.
T Consensus 83 ------------~~~~~fD~v~~~~~l----~~~---~---~~~~~l~~~~~~LkpgG~l~~~ 123 (239)
T 1xxl_A 83 ------------FPDDSFDIITCRYAA----HHF---S---DVRKAVREVARVLKQDGRFLLV 123 (239)
T ss_dssp ------------SCTTCEEEEEEESCG----GGC---S---CHHHHHHHHHHHEEEEEEEEEE
T ss_pred ------------CCCCcEEEEEECCch----hhc---c---CHHHHHHHHHHHcCCCcEEEEE
Confidence 145689999985210 001 1 1378999999999999999874
No 143
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.63 E-value=1.8e-07 Score=99.50 Aligned_cols=133 Identities=14% Similarity=0.188 Sum_probs=92.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|+.+..|.+.. ..+|+++|+++..++.+++.+....-++++++.+|+.++...
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~-------------- 183 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAA-------------- 183 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH--------------
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh--------------
Confidence 4699999999999999998876 379999999999999999775211123699999999887432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCC-CCCCCCC-------------ChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGT-SAPPVEF-------------VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~-s~Pp~~f-------------~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....||+|++|+..+.. |+ .--|... +..++|..+.+.|+|||.+++-.
T Consensus 184 ---------------~~~~fD~Il~D~PcSg~--G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 184 ---------------VPEMFDAILLDAPCSGE--GVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp ---------------STTCEEEEEEECCCCCG--GGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------------ccccCCEEEECCCcCCc--ccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 24579999999854321 21 1112211 13578999999999999999876
Q ss_pred CCCCchHHHHHHHHHHHhcC
Q 038592 407 IPPNRSFYDMLIQEFRDVFQ 426 (478)
Q Consensus 407 ~~~~~~~~~~v~~~l~~vF~ 426 (478)
.+...+--..++..+.+-++
T Consensus 247 cs~~~~Ene~vv~~~l~~~~ 266 (479)
T 2frx_A 247 CTLNQEENEAVCLWLKETYP 266 (479)
T ss_dssp SCCSSTTTHHHHHHHHHHST
T ss_pred ccCCcccCHHHHHHHHHHCC
Confidence 65433222334444444343
No 144
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.63 E-value=8.8e-08 Score=91.18 Aligned_cols=104 Identities=15% Similarity=0.081 Sum_probs=79.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..|.+....+|++||+++.+++.|++.+... ++++++.+|..++-
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~------------------ 153 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETAT------------------ 153 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCC------------------
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCC------------------
Confidence 5799999999999998887765568999999999999999987532 67999999986531
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....+||+|++.- . +...+.. .-..+++.+++.|+|||.+++-.
T Consensus 154 ------------~~~~~fD~v~~~~----~---l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 154 ------------LPPNTYDLIVIQW----T---AIYLTDA-DFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp ------------CCSSCEEEEEEES----C---GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------CCCCCeEEEEEcc----h---hhhCCHH-HHHHHHHHHHHhcCCCeEEEEEe
Confidence 1356899999831 1 1000100 13689999999999999998854
No 145
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.63 E-value=9.2e-08 Score=93.76 Aligned_cols=104 Identities=20% Similarity=0.164 Sum_probs=81.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+||.||+|.|.++..+.+.+ +.+|++||++|.+++.|++.+... ..+++++++|+.++-
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~v~~~~~d~~~~~---------------- 85 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL-PYDSEFLEGDATEIE---------------- 85 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS-SSEEEEEESCTTTCC----------------
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEEcchhhcC----------------
Confidence 6799999999999999998875 379999999999999999987532 238999999987641
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|++... +...+ -...+++.+++.|+|||.+++....
T Consensus 86 ---------------~~~~fD~v~~~~~-------l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 86 ---------------LNDKYDIAICHAF-------LLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ---------------CSSCEEEEEEESC-------GGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ---------------cCCCeeEEEECCh-------hhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 2457999999531 11111 2278999999999999999976554
No 146
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.63 E-value=4.9e-08 Score=93.13 Aligned_cols=106 Identities=22% Similarity=0.275 Sum_probs=79.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.+|+|.|.++..|.+. +.+|++||+++.+++.|++.+... +.+++++.+|..++-
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~------------------ 101 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER-GYEVVGLDLHEEMLRVARRKAKER-NLKIEFLQGDVLEIA------------------ 101 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHT-TCCCEEEESCGGGCC------------------
T ss_pred CCEEEEeCCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHhc-CCceEEEECChhhcc------------------
Confidence 579999999999999888876 679999999999999999876421 236899999987641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
...+||+|++..... . .. ++. ....+++.+++.|+|||.+++.+.+
T Consensus 102 -------------~~~~fD~v~~~~~~~-~---~~-~~~--~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 102 -------------FKNEFDAVTMFFSTI-M---YF-DEE--DLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp -------------CCSCEEEEEECSSGG-G---GS-CHH--HHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -------------cCCCccEEEEcCCch-h---cC-CHH--HHHHHHHHHHHHcCCCeEEEEeccc
Confidence 235799999732110 0 00 000 2367999999999999999987754
No 147
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.63 E-value=8.9e-08 Score=92.45 Aligned_cols=105 Identities=21% Similarity=0.195 Sum_probs=81.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+... ..++++++.+|+.+.-
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------------- 124 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP----------------- 124 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----------------
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-----------------
Confidence 5799999999999999998877889999999999999999876321 2457999999986530
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
..+.+||+|+.-- ....+ + -...+++.+++.|+|||.+++...
T Consensus 125 -------------~~~~~fD~v~~~~----~l~~~--~----~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 125 -------------FEDASFDAVWALE----SLHHM--P----DRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp -------------SCTTCEEEEEEES----CTTTS--S----CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -------------CCCCCccEEEEec----hhhhC--C----CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 1356899999731 11011 1 137899999999999999987553
No 148
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.62 E-value=1.8e-07 Score=103.89 Aligned_cols=114 Identities=15% Similarity=0.164 Sum_probs=84.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC--CCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED--GEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~--d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|+|+++..+...-..+|++||+++.+++.|++.+.... +++++++.+|+.+++..
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~-------------- 605 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLRE-------------- 605 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHH--------------
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHh--------------
Confidence 46999999999999988776434589999999999999999874332 25899999999999865
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCC-C----ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVE-F----VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~-f----~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++|...-.... .... + .-.+++..+.++|+|||+|++-..++
T Consensus 606 ---------------~~~~fD~Ii~DPP~f~~~~----~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~ 660 (703)
T 3v97_A 606 ---------------ANEQFDLIFIDPPTFSNSK----RMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKR 660 (703)
T ss_dssp ---------------CCCCEEEEEECCCSBC-----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCT
T ss_pred ---------------cCCCccEEEECCccccCCc----cchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCc
Confidence 3568999999853211000 0000 1 12567889999999999999766553
No 149
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.62 E-value=1.8e-07 Score=88.88 Aligned_cols=108 Identities=14% Similarity=0.149 Sum_probs=79.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..|.+... +|++||+++.+++.|++.+. ..+++++++|..++-....-.
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~~------------ 120 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQIH------------ 120 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHHH------------
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc---ccCceEEECcccccccccccc------------
Confidence 46899999999999999988754 99999999999999999874 358999999998753221000
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
....||+|+....-.. + ++. ....+++.+++.|+|||.+++.-.
T Consensus 121 -------------~~~~~d~v~~~~~~~~----~--~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 121 -------------SEIGDANIYMRTGFHH----I--PVE--KRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp -------------HHHCSCEEEEESSSTT----S--CGG--GHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred -------------cccCccEEEEcchhhc----C--CHH--HHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1234999998532110 0 111 237899999999999998665443
No 150
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.62 E-value=6.9e-08 Score=99.71 Aligned_cols=103 Identities=21% Similarity=0.196 Sum_probs=78.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.+.||.||+|+|.|++++++.-..+|++||.++ +++.|++..... ..++++++.+|..++
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~------------------ 144 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV------------------ 144 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC------------------
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee------------------
Confidence 468999999999999998876557999999997 788888765321 257899999998664
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....++|+|+......- ...+-.-+.++....+.|+|||+++-
T Consensus 145 -------------~lpe~~DvivsE~~~~~-------l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 145 -------------ELPEQVDAIVSEWMGYG-------LLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp -------------CCSSCEEEEECCCCBTT-------BTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred -------------cCCccccEEEeeccccc-------ccccchhhhHHHHHHhhCCCCceECC
Confidence 13468999998654321 11222347888999999999999873
No 151
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.60 E-value=2e-07 Score=87.92 Aligned_cols=102 Identities=19% Similarity=0.140 Sum_probs=79.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+....+|++||+++.+++.|++.+.. .+++++.+|..++-
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~------------------ 102 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLH------------------ 102 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCC------------------
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhcc------------------
Confidence 579999999999999888876323999999999999999998753 47999999987641
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
....+||+|++.. ....+ + ....+++.+++.|+|||.+++...
T Consensus 103 ------------~~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 103 ------------LPQDSFDLAYSSL----ALHYV---E---DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp ------------CCTTCEEEEEEES----CGGGC---S---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ------------CCCCCceEEEEec----ccccc---c---hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 1356899999842 11011 1 237899999999999999998664
No 152
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.60 E-value=8.3e-08 Score=93.74 Aligned_cols=114 Identities=14% Similarity=0.124 Sum_probs=82.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC---C-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG---L-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg---~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
+.+||.||+|.|.++..|.+. +.+|++||+++.+++.|++... . ....++.+..+|..++-...
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----------- 125 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV----------- 125 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS-----------
T ss_pred CCEEEEecCCCCHHHHHHHHC-CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccc-----------
Confidence 579999999999999988876 5699999999999999987641 1 12257889999988764331
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC---CCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV---EFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~---~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++--. ....+ +.. .=.-..+|+.+++.|+|||.+++.....
T Consensus 126 ----------------~~~~~fD~V~~~g~---~l~~~--~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 126 ----------------PAGDGFDAVICLGN---SFAHL--PDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp ----------------CCTTCEEEEEECTT---CGGGS--CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ----------------ccCCCeEEEEEcCh---HHhhc--CccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 14568999998211 00011 110 0014789999999999999999877543
No 153
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.60 E-value=7.2e-08 Score=95.80 Aligned_cols=104 Identities=12% Similarity=0.057 Sum_probs=81.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.++.+|++||+++.+++.|++.+... ..++++++.+|+.+.-
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 180 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP----------------- 180 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----------------
T ss_pred CCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-----------------
Confidence 5799999999999999988876789999999999999999875422 2358999999986430
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
..+.+||+|+..- . + ..+--..+|+.+++.|+|||.+++...
T Consensus 181 -------------~~~~~fD~V~~~~----~---l----~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 181 -------------FDKGAVTASWNNE----S---T----MYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp -------------CCTTCEEEEEEES----C---G----GGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------CCCCCEeEEEECC----c---h----hhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 1457899999831 1 1 111258899999999999999997554
No 154
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.60 E-value=1.8e-07 Score=86.80 Aligned_cols=101 Identities=26% Similarity=0.238 Sum_probs=78.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+ +. ++++||+++.+++.|++.+ ++++++.+|+.++-
T Consensus 37 ~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~----------------- 90 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALP----------------- 90 (211)
T ss_dssp CSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCC-----------------
T ss_pred CCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCC-----------------
Confidence 579999999999988766 56 9999999999999999987 56888988875430
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCch
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRS 412 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~ 412 (478)
..+.+||+|++.-. ...+ + ....+++.+++.|+|||.+++....+...
T Consensus 91 -------------~~~~~fD~v~~~~~----l~~~---~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 91 -------------FPGESFDVVLLFTT----LEFV---E---DVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp -------------SCSSCEEEEEEESC----TTTC---S---CHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred -------------CCCCcEEEEEEcCh----hhhc---C---CHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 14568999998421 1011 1 23789999999999999999988776543
No 155
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.59 E-value=2.7e-08 Score=94.19 Aligned_cols=90 Identities=18% Similarity=0.200 Sum_probs=74.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++. .++++++++|+.+.+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~----------------- 105 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ-AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELP----------------- 105 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCC-----------------
T ss_pred CCeEEEeCCCCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccC-----------------
Confidence 579999999999999998887 67999999999999999988 3478999999864321
Q ss_pred cccCCCccCCCCCC-CCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEE
Q 038592 343 SLKDGNFLDNSDRV-DNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFV 403 (478)
Q Consensus 343 ~~~~~~~~~~~~~~-~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv 403 (478)
.. +.+||+|+... + + ..+++.+++.|+|||.++
T Consensus 106 ------------~~~~~~fD~v~~~~---~--------~-----~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 106 ------------AGLGAPFGLIVSRR---G--------P-----TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ------------TTCCCCEEEEEEES---C--------C-----SGGGGGHHHHEEEEEEEE
T ss_pred ------------CcCCCCEEEEEeCC---C--------H-----HHHHHHHHHHcCCCcEEE
Confidence 13 56899999851 1 1 347788999999999998
No 156
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.59 E-value=6.2e-08 Score=89.30 Aligned_cols=103 Identities=23% Similarity=0.347 Sum_probs=78.9
Q ss_pred eEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccc
Q 038592 265 KALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSL 344 (478)
Q Consensus 265 ~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~ 344 (478)
+||.||+|.|.++..+.+. +.+|++||+++.+++.|++.+... ..+++++.+|..++-
T Consensus 32 ~vLdiGcG~G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~-------------------- 89 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEK-GVKITTVQSNLADFD-------------------- 89 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHH-TCCEEEECCBTTTBS--------------------
T ss_pred CEEEECCCCCHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhc-CCceEEEEcChhhcC--------------------
Confidence 9999999999999888876 679999999999999999876321 126899999976541
Q ss_pred cCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 345 KDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 345 ~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++.... + ++. ....+++.+++.|+|||.+++.....
T Consensus 90 ----------~~~~~fD~v~~~~~~------~--~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 90 ----------IVADAWEGIVSIFCH------L--PSS--LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp ----------CCTTTCSEEEEECCC------C--CHH--HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred ----------CCcCCccEEEEEhhc------C--CHH--HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 135689999983210 0 111 23789999999999999999876543
No 157
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.59 E-value=1.2e-07 Score=96.50 Aligned_cols=105 Identities=21% Similarity=0.170 Sum_probs=79.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++.++.+....+|++||+++ +++.|++..... ..++++++.+|..++-
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 128 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVE----------------- 128 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-----------------
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHcc-----------------
Confidence 579999999999999999987556999999995 999999876422 2457999999987651
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.+..+||+|+.+..... + ...-.-..++..+.+.|+|||+++.+
T Consensus 129 -------------~~~~~fD~Iis~~~~~~----l---~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 129 -------------LPVEKVDIIISEWMGYC----L---FYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp -------------CSSSCEEEEEECCCBBT----B---TBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred -------------CCCCceEEEEEcccccc----c---cCchhHHHHHHHHHHhCCCCCEEccc
Confidence 14578999999642110 0 01113467999999999999999743
No 158
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.58 E-value=1.1e-07 Score=97.73 Aligned_cols=103 Identities=21% Similarity=0.165 Sum_probs=78.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++.++.+....+|++||++ .+++.|++.+... ..++++++.+|+.++.
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----------------- 125 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDIS----------------- 125 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCC-----------------
T ss_pred CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcC-----------------
Confidence 57999999999999999998744599999999 9999999876422 2467999999997651
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
...+||+|+.+..... ....-.-..++..+++.|+|||++++
T Consensus 126 --------------~~~~~D~Iv~~~~~~~-------l~~e~~~~~~l~~~~~~LkpgG~li~ 167 (376)
T 3r0q_C 126 --------------LPEKVDVIISEWMGYF-------LLRESMFDSVISARDRWLKPTGVMYP 167 (376)
T ss_dssp --------------CSSCEEEEEECCCBTT-------BTTTCTHHHHHHHHHHHEEEEEEEES
T ss_pred --------------cCCcceEEEEcChhhc-------ccchHHHHHHHHHHHhhCCCCeEEEE
Confidence 2368999999642110 11111246799999999999999975
No 159
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.58 E-value=5.9e-08 Score=90.49 Aligned_cols=102 Identities=21% Similarity=0.066 Sum_probs=77.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC--CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD--FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~--~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+..+ .+|++||+++.+++.|++.+....-++++++.+|+.+.+.
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------------- 142 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYE--------------- 142 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCG---------------
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCC---------------
Confidence 56999999999999988888753 7999999999999999987632122459999999853321
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
....||+|+++..- .++. +.+.+.|+|||.+++.+....
T Consensus 143 ---------------~~~~fD~v~~~~~~-----------~~~~-----~~~~~~L~pgG~lv~~~~~~~ 181 (215)
T 2yxe_A 143 ---------------PLAPYDRIYTTAAG-----------PKIP-----EPLIRQLKDGGKLLMPVGRYL 181 (215)
T ss_dssp ---------------GGCCEEEEEESSBB-----------SSCC-----HHHHHTEEEEEEEEEEESSSS
T ss_pred ---------------CCCCeeEEEECCch-----------HHHH-----HHHHHHcCCCcEEEEEECCCC
Confidence 24579999995211 1111 478999999999999886553
No 160
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.58 E-value=8.6e-08 Score=93.97 Aligned_cols=105 Identities=20% Similarity=0.265 Sum_probs=80.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+.. ...++++++.+|+.+.-
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------------- 145 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP----------------- 145 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----------------
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-----------------
Confidence 579999999999999988887678999999999999999987531 12467999999986530
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
..+.+||+|++.- ....+ +. -..+|+.+++.|+|||.+++...
T Consensus 146 -------------~~~~~fD~v~~~~----~l~~~---~~---~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 -------------CEDNSYDFIWSQD----AFLHS---PD---KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp -------------SCTTCEEEEEEES----CGGGC---SC---HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------CCCCCEeEEEecc----hhhhc---CC---HHHHHHHHHHHcCCCeEEEEEEe
Confidence 1456899999831 10001 11 37899999999999999988653
No 161
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.58 E-value=1.3e-07 Score=93.20 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=81.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC--CCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE--DGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~--~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
+.+||.||+|.|.++..|.+.+ ..+|++||+++.+++.|++.+... ..++++++++|+.++-.. .
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~--~--------- 105 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL--G--------- 105 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG--C---------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc--c---------
Confidence 6799999999999999998754 689999999999999999886432 246899999998764210 0
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.......+||+|++.. . + ..+--..+++.+++.|+|||.+++
T Consensus 106 -------------~~~~~~~~fD~V~~~~----~---l----~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 106 -------------ADSVDKQKIDMITAVE----C---A----HWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp -------------TTTTTSSCEEEEEEES----C---G----GGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -------------cccccCCCeeEEeHhh----H---H----HHhCHHHHHHHHHHhcCCCcEEEE
Confidence 0000136899999942 0 1 112447899999999999999987
No 162
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.58 E-value=2.7e-07 Score=85.93 Aligned_cols=129 Identities=13% Similarity=0.164 Sum_probs=88.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH-----HHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF-----LEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~-----l~~~~~~~~~~~~~ 337 (478)
..+||.+|+|.|.++..+.+. ..+|++||++|.. ..++++++.+|..+. +.+....
T Consensus 26 g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~------- 86 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALRE------- 86 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHH-------
T ss_pred CCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhc-------
Confidence 469999999999999999887 7899999999851 235799999997642 1111100
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC----ChHHHHHHHHHccCcCcEEEEEeCCCCchH
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF----VRKDVLLAARLILSDFGIFVMNVIPPNRSF 413 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f----~~~efl~~~~~~L~~~Gilv~N~~~~~~~~ 413 (478)
....+||+|+.|.... ..|... .... +....++.+.+.|+|||.|++-+.....
T Consensus 87 -----------------~~~~~~D~Vlsd~~~~--~~g~~~-~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~-- 144 (191)
T 3dou_A 87 -----------------EGIEKVDDVVSDAMAK--VSGIPS-RDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM-- 144 (191)
T ss_dssp -----------------HTCSSEEEEEECCCCC--CCSCHH-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH--
T ss_pred -----------------ccCCcceEEecCCCcC--CCCCcc-cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC--
Confidence 0113899999986211 111100 0000 1246788899999999999987765432
Q ss_pred HHHHHHHHHHhcCccEEEe
Q 038592 414 YDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 414 ~~~v~~~l~~vF~~v~~~~ 432 (478)
...+...+++.|..|...+
T Consensus 145 ~~~~~~~l~~~F~~v~~~k 163 (191)
T 3dou_A 145 TNDFIAIWRKNFSSYKISK 163 (191)
T ss_dssp HHHHHHHHGGGEEEEEEEC
T ss_pred HHHHHHHHHHhcCEEEEEC
Confidence 3567888899999887665
No 163
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.57 E-value=5.4e-08 Score=91.75 Aligned_cols=108 Identities=22% Similarity=0.212 Sum_probs=80.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.++++||+++.+++.|++.+... ..+++++.+|..++-
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~------------------ 97 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQ-GLKPRLACQDISNLN------------------ 97 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHT-TCCCEEECCCGGGCC------------------
T ss_pred CCeEEEeCCCCCHHHHHHHHC-CCcEEEEECCHHHHHHHHHHHhhc-CCCeEEEecccccCC------------------
Confidence 579999999999999888876 679999999999999999886422 127899999987541
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|++..+. ...+ +..-....+|+.+++.|+|||.+++.+..+
T Consensus 98 -------------~~~~fD~v~~~~~~---l~~~---~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 98 -------------INRKFDLITCCLDS---TNYI---IDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp -------------CSCCEEEEEECTTG---GGGC---CSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred -------------ccCCceEEEEcCcc---cccc---CCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 22679999983211 1001 000023689999999999999999877643
No 164
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.57 E-value=1.6e-07 Score=95.33 Aligned_cols=103 Identities=24% Similarity=0.182 Sum_probs=77.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++.++.+....+|++||+++ +++.|++.+... ..++++++.+|+.++-
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------------- 126 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH----------------- 126 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------------
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc-----------------
Confidence 579999999999999999887446999999997 899999876321 2368999999987641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFV 403 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv 403 (478)
.+..+||+|+.+.... .+ .... .-..++..+++.|+|||.++
T Consensus 127 -------------~~~~~~D~Ivs~~~~~----~l--~~~~-~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 127 -------------LPVEKVDVIISEWMGY----FL--LFES-MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -------------CSCSCEEEEEECCCBT----TB--TTTC-HHHHHHHHHHHHEEEEEEEE
T ss_pred -------------CCCCcEEEEEEcCchh----hc--cCHH-HHHHHHHHHHhhcCCCcEEE
Confidence 1346899999853110 00 0111 23579999999999999998
No 165
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.56 E-value=2.4e-07 Score=91.74 Aligned_cols=144 Identities=15% Similarity=0.153 Sum_probs=92.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+.++.+|++||+++.++++|++..... ...+++++.+|..+.+.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~---------------- 187 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK---------------- 187 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG----------------
T ss_pred CCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc----------------
Confidence 4699999999999999888775579999999999999999876321 23479999999987531
Q ss_pred ccccCCCccCCCCCCCCce---eEEEEeCCCCCCCCCC-----CCCCCCCC----hHHHHHHHH-HccCcCcEEEEEeCC
Q 038592 342 CSLKDGNFLDNSDRVDNKF---DVIMVDLDSGDARNGT-----SAPPVEFV----RKDVLLAAR-LILSDFGIFVMNVIP 408 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~y---DvIivDv~s~d~~~g~-----s~Pp~~f~----~~efl~~~~-~~L~~~Gilv~N~~~ 408 (478)
.+| |+|+.+.--......+ ..|...++ ..+|++.+. +.|+|||.+++-+..
T Consensus 188 ----------------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 188 ----------------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp ----------------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred ----------------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 257 9999963111000000 00100000 127999999 999999999986654
Q ss_pred CCchHHHHHHHHHHHhcCccEEEeecccceEEEEEEc
Q 038592 409 PNRSFYDMLIQEFRDVFQELYEIDVGNEENFVLIATG 445 (478)
Q Consensus 409 ~~~~~~~~v~~~l~~vF~~v~~~~v~~~~N~Vl~a~~ 445 (478)
... + .+.+.|......+--.+...++++.+
T Consensus 252 ~q~---~----~v~~~~~~~~~~~D~~g~~R~~~~~~ 281 (284)
T 1nv8_A 252 DQV---E----ELKKIVSDTVFLKDSAGKYRFLLLNR 281 (284)
T ss_dssp TCH---H----HHTTTSTTCEEEECTTSSEEEEEEEC
T ss_pred hHH---H----HHHHHHHhCCeecccCCCceEEEEEE
Confidence 322 2 23444543322221223456666654
No 166
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.56 E-value=4.4e-08 Score=92.66 Aligned_cols=101 Identities=20% Similarity=0.276 Sum_probs=77.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC-------CEEEEEECChHHHHHHHHhcCCCC-----CCCeEEEEchHHHHHHHHHhh
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD-------FEVVGVEMDEVVLRVARQYFGLED-----GEFLQVSVGDAIEFLEKLARQ 330 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~-------~~V~~VEiDp~Vl~vA~~~Fg~~~-----d~rl~v~v~Dg~~~l~~~~~~ 330 (478)
..+||.||+|.|.++..+.+..+ .+|++||+++.+++.|++.+.... .++++++.+|+.+.+.
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~----- 159 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP----- 159 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-----
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC-----
Confidence 46999999999999988887643 599999999999999998764211 3579999999876321
Q ss_pred hcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 331 IVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....||+|+++... .+ +++.+.+.|+|||.+++.+...
T Consensus 160 -------------------------~~~~fD~I~~~~~~-----------~~-----~~~~~~~~LkpgG~lvi~~~~~ 197 (227)
T 1r18_A 160 -------------------------PNAPYNAIHVGAAA-----------PD-----TPTELINQLASGGRLIVPVGPD 197 (227)
T ss_dssp -------------------------GGCSEEEEEECSCB-----------SS-----CCHHHHHTEEEEEEEEEEESCS
T ss_pred -------------------------cCCCccEEEECCch-----------HH-----HHHHHHHHhcCCCEEEEEEecC
Confidence 23579999985321 11 2377899999999999998764
No 167
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.56 E-value=9.1e-08 Score=90.85 Aligned_cols=104 Identities=24% Similarity=0.203 Sum_probs=75.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|.++..|.+.. ..+|++||+++.+++.+.+.... .++++++.+|+.+...- .
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~--~~~v~~~~~d~~~~~~~-~------------ 142 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK--RTNIIPVIEDARHPHKY-R------------ 142 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--CTTEEEECSCTTCGGGG-G------------
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc--cCCeEEEEcccCChhhh-c------------
Confidence 4699999999999999998874 47999999998765544433221 16799999998764210 0
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
....+||+|++|... |. ....++..+++.|+|||.+++.+.
T Consensus 143 --------------~~~~~~D~V~~~~~~----------~~--~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 143 --------------MLIAMVDVIFADVAQ----------PD--QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp --------------GGCCCEEEEEECCCC----------TT--HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --------------ccCCcEEEEEEcCCC----------cc--HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 134679999996531 11 225578889999999999998554
No 168
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.56 E-value=1.6e-07 Score=88.47 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=77.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+.. .+|++||+++.+++.|++.+.... +++++.+|+.+.+.
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~----------------- 130 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYE----------------- 130 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCG-----------------
T ss_pred CCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccc-----------------
Confidence 5699999999999999888875 899999999999999999876432 79999999876221
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|+++.. ..++. ..+++.|+|||.+++.....
T Consensus 131 -------------~~~~fD~v~~~~~-----------~~~~~-----~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 131 -------------EEKPYDRVVVWAT-----------APTLL-----CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp -------------GGCCEEEEEESSB-----------BSSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred -------------cCCCccEEEECCc-----------HHHHH-----HHHHHHcCCCcEEEEEEcCC
Confidence 2457999998521 11222 36889999999999887654
No 169
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.56 E-value=8.9e-08 Score=88.46 Aligned_cols=108 Identities=16% Similarity=0.186 Sum_probs=77.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.+|+|+|.+...+....+.+|++||+++.+++.|++.+... ..+++++.+|+.++-
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~d~~~~~------------------ 84 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-NFKLNISKGDIRKLP------------------ 84 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH-TCCCCEEECCTTSCC------------------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc-CCceEEEECchhhCC------------------
Confidence 5799999999998643333445789999999999999999875321 246888999886530
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++. . ....+ ++. ....+++.+++.|+|||.+++...+.
T Consensus 85 ------------~~~~~fD~v~~~--~--~l~~~--~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 85 ------------FKDESMSFVYSY--G--TIFHM--RKN--DVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp ------------SCTTCEEEEEEC--S--CGGGS--CHH--HHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred ------------CCCCceeEEEEc--C--hHHhC--CHH--HHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 135689999983 1 10001 111 24789999999999999999877543
No 170
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.55 E-value=3.6e-07 Score=88.26 Aligned_cols=138 Identities=18% Similarity=0.292 Sum_probs=91.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHH----HHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVL----RVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl----~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~ 336 (478)
..+||.+|+|.|+++..+.+.. ..+|++||+++.++ +.|++. +++.++++|+...-..
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r------~nv~~i~~Da~~~~~~---------- 140 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR------PNIFPLLADARFPQSY---------- 140 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC------TTEEEEECCTTCGGGT----------
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc------CCeEEEEcccccchhh----------
Confidence 4699999999999999998874 57999999999775 455442 4799999998743100
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC-------
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP------- 409 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~------- 409 (478)
.....+||+|++|+.. |. ...-+...+++.|+|||.|++-+-.+
T Consensus 141 -----------------~~~~~~~D~I~~d~a~----------~~--~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~ 191 (232)
T 3id6_C 141 -----------------KSVVENVDVLYVDIAQ----------PD--QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKD 191 (232)
T ss_dssp -----------------TTTCCCEEEEEECCCC----------TT--HHHHHHHHHHHHEEEEEEEEEEEC-------CC
T ss_pred -----------------hccccceEEEEecCCC----------hh--HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCC
Confidence 0123579999998521 11 22334566777999999999865322
Q ss_pred CchHHHHHHHHHHHh-cCccEEEeec--ccceEEEEEEc
Q 038592 410 NRSFYDMLIQEFRDV-FQELYEIDVG--NEENFVLIATG 445 (478)
Q Consensus 410 ~~~~~~~v~~~l~~v-F~~v~~~~v~--~~~N~Vl~a~~ 445 (478)
..+..+.+...|++. |.-+..+... +....+++|.+
T Consensus 192 ~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~ 230 (232)
T 3id6_C 192 PKEIYKTEVEKLENSNFETIQIINLDPYDKDHAIVLSKY 230 (232)
T ss_dssp SSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEEEEEEe
Confidence 122345667777764 6655555553 23456666653
No 171
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.55 E-value=5e-08 Score=91.84 Aligned_cols=101 Identities=23% Similarity=0.232 Sum_probs=77.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCC-----CCCCeEEEEchHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLE-----DGEFLQVSVGDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~-----~d~rl~v~v~Dg~~~l~~~~~~~~~~~ 335 (478)
..+||.||+|.|.++..+.+.. ..+|+++|+++.+++.|++.+... ..++++++.+|+.....
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~---------- 147 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYA---------- 147 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCG----------
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcc----------
Confidence 5699999999999998888764 369999999999999999875321 13579999999864310
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....||+|+++... .+ +++.+.+.|+|||.+++.+.+.
T Consensus 148 --------------------~~~~fD~i~~~~~~-----------~~-----~~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 148 --------------------EEAPYDAIHVGAAA-----------PV-----VPQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp --------------------GGCCEEEEEECSBB-----------SS-----CCHHHHHTEEEEEEEEEEESCT
T ss_pred --------------------cCCCcCEEEECCch-----------HH-----HHHHHHHhcCCCcEEEEEEecC
Confidence 24569999986321 12 3467899999999999988754
No 172
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.54 E-value=9.2e-08 Score=91.03 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=75.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+..+.+|++||+++.+++.|++.+....-++++++.+|+..-+.
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~----------------- 154 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFP----------------- 154 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG-----------------
T ss_pred CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCC-----------------
Confidence 469999999999999888876448999999999999999987642222459999999822110
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|+++.. ...+. ..+.+.|+|||.+++.+...
T Consensus 155 -------------~~~~fD~Ii~~~~-----------~~~~~-----~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 155 -------------PKAPYDVIIVTAG-----------APKIP-----EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp -------------GGCCEEEEEECSB-----------BSSCC-----HHHHHTEEEEEEEEEEECSS
T ss_pred -------------CCCCccEEEECCc-----------HHHHH-----HHHHHhcCCCcEEEEEEecC
Confidence 2335999998521 11222 36889999999999988755
No 173
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.54 E-value=2.8e-07 Score=92.90 Aligned_cols=104 Identities=21% Similarity=0.219 Sum_probs=77.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++.++.+....+|++||+++ +++.|++.+... ..++++++.+|+.++-
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------------- 100 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------------- 100 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------------
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHHHHHHHHcCCCCCEEEEECchhhcc-----------------
Confidence 469999999999999999887446999999995 899998876321 2467999999987641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.+..+||+|+.+..... + .... .-..++..+++.|+|||+++.
T Consensus 101 -------------~~~~~~D~Ivs~~~~~~----l--~~~~-~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 101 -------------LPFPKVDIIISEWMGYF----L--LYES-MMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp -------------CSSSCEEEEEECCCBTT----B--STTC-CHHHHHHHHHHHEEEEEEEES
T ss_pred -------------CCCCcccEEEEeCchhh----c--ccHH-HHHHHHHHHHhhcCCCeEEEE
Confidence 13468999999632110 1 0111 236789999999999999973
No 174
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.53 E-value=9.8e-08 Score=92.91 Aligned_cols=111 Identities=19% Similarity=0.058 Sum_probs=81.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+....+|++||+++.+++.|++.+... ...+++++++|+.+.--
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---------------- 128 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------------- 128 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC----------------
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccccc----------------
Confidence 5799999999998888777765569999999999999999887532 23578999999875410
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++..- +....... ....+++.+++.|+|||.+++.+...
T Consensus 129 -------------~~~~~fD~v~~~~~-------l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 129 -------------DLGKEFDVISSQFS-------FHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp -------------CCSSCEEEEEEESC-------GGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred -------------CCCCCcCEEEECch-------hhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 03567999998521 10000000 23689999999999999999887554
No 175
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.52 E-value=1.6e-07 Score=95.37 Aligned_cols=104 Identities=18% Similarity=0.121 Sum_probs=76.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++.++.+....+|++||+++ +++.|++.+... ..++++++.+|..++-
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~----------------- 112 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS----------------- 112 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-----------------
T ss_pred cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC-----------------
Confidence 579999999999999999887556999999997 778988775321 2368999999986540
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|+.+.... .+ ..+ .-.+++..+++.|+|||+++++.
T Consensus 113 --------------~~~~~D~Ivs~~~~~----~~--~~~--~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 113 --------------LPEQVDIIISEPMGY----ML--FNE--RMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp --------------CSSCEEEEEECCCBT----TB--TTT--SHHHHHHHGGGGEEEEEEEESCE
T ss_pred --------------CCCceeEEEEeCchh----cC--ChH--HHHHHHHHHHhhcCCCeEEEEec
Confidence 235799999952110 00 011 12567788899999999998543
No 176
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.52 E-value=1.6e-08 Score=96.20 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=76.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+.+. +.+|++||+++.+++.|++.+.... .++++++++|+.++.
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~----------------- 140 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALT-GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA----------------- 140 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-----------------
T ss_pred CCEEEECccccCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-----------------
Confidence 579999999999999998876 5899999999999999998764322 257999999999874
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++|..-. +... ....+..+++.|+|||++++..
T Consensus 141 --------------~~~~~D~v~~~~~~~----~~~~------~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 141 --------------SFLKADVVFLSPPWG----GPDY------ATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp --------------GGCCCSEEEECCCCS----SGGG------GGSSSBCTTTSCSSCHHHHHHH
T ss_pred --------------ccCCCCEEEECCCcC----Ccch------hhhHHHHHHhhcCCcceeHHHH
Confidence 235799999963111 1110 1114556888999999877543
No 177
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.52 E-value=1.3e-07 Score=95.73 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=86.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++.. .. ...+|++||++|..++.|++.+.... .++++++.+|+.+++
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~----------------- 256 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD----------------- 256 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-----------------
T ss_pred CCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-----------------
Confidence 46999999999999988 65 46799999999999999998875332 357999999998762
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
.+||+|++|. |. ...+++..+.+.|+|||++++...+.. ...+.+.+
T Consensus 257 ----------------~~fD~Vi~dp------------P~--~~~~~l~~~~~~L~~gG~l~~~~~~~~---~~~~~~~l 303 (336)
T 2yx1_A 257 ----------------VKGNRVIMNL------------PK--FAHKFIDKALDIVEEGGVIHYYTIGKD---FDKAIKLF 303 (336)
T ss_dssp ----------------CCEEEEEECC------------TT--TGGGGHHHHHHHEEEEEEEEEEEEESS---SHHHHHHH
T ss_pred ----------------CCCcEEEECC------------cH--hHHHHHHHHHHHcCCCCEEEEEEeecC---chHHHHHH
Confidence 4699999963 21 124899999999999999988665554 33455666
Q ss_pred HHhc
Q 038592 422 RDVF 425 (478)
Q Consensus 422 ~~vF 425 (478)
++.+
T Consensus 304 ~~~~ 307 (336)
T 2yx1_A 304 EKKC 307 (336)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 6664
No 178
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.52 E-value=2e-07 Score=94.30 Aligned_cols=132 Identities=17% Similarity=0.162 Sum_probs=93.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+||.+|+|.|.++..+.+.. ..+|++||+++.+++.|++.+... +...+++.+|..++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~-~~~~~~~~~d~~~~------------------ 257 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN-GVEGEVFASNVFSE------------------ 257 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT-TCCCEEEECSTTTT------------------
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-CCCCEEEEcccccc------------------
Confidence 4689999999999999988875 579999999999999999886421 22367888888654
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-------ChHHHHHHHHHccCcCcEEEEEeCCCCchHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-------VRKDVLLAARLILSDFGIFVMNVIPPNRSFY 414 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-------~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~ 414 (478)
...+||+|+++. |-+. ....+++.+++.|+|||.+++-.... .. +
T Consensus 258 --------------~~~~fD~Iv~~~------------~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-~~-~ 309 (343)
T 2pjd_A 258 --------------VKGRFDMIISNP------------PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF-LP-Y 309 (343)
T ss_dssp --------------CCSCEEEEEECC------------CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT-SS-H
T ss_pred --------------ccCCeeEEEECC------------CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC-CC-c
Confidence 245799999942 2111 13789999999999999998744322 12 1
Q ss_pred HHHHHHHHHhcCccEEEeecccceEEEEEEc
Q 038592 415 DMLIQEFRDVFQELYEIDVGNEENFVLIATG 445 (478)
Q Consensus 415 ~~v~~~l~~vF~~v~~~~v~~~~N~Vl~a~~ 445 (478)
-..+.+.|..+..+.- +..-.|+-+.+
T Consensus 310 ---~~~l~~~f~~~~~~~~-~~gf~v~~~~k 336 (343)
T 2pjd_A 310 ---PDVLDETFGFHEVIAQ-TGRFKVYRAIM 336 (343)
T ss_dssp ---HHHHHHHHSCCEEEEE-CSSEEEEEEEC
T ss_pred ---HHHHHHhcCceEEEee-CCCEEEEEEEe
Confidence 2456777887765542 33445555544
No 179
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.52 E-value=3.8e-07 Score=82.85 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=80.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.+|+|+|.++..+.+.. +|++||+++.+++. .++++++.+|+.+.+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~~------------------ 74 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES---------HRGGNLVRADLLCSI------------------ 74 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT---------CSSSCEEECSTTTTB------------------
T ss_pred CCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc---------ccCCeEEECChhhhc------------------
Confidence 4699999999999999998875 99999999999988 357899999987642
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC-----CCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV-----EFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDML 417 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~-----~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 417 (478)
...+||+|+.+..-. .. ++. .-...++++.+.+.| |||.+++-..... ..+.+
T Consensus 75 -------------~~~~fD~i~~n~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~--~~~~l 132 (170)
T 3q87_B 75 -------------NQESVDVVVFNPPYV----PD--TDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN--RPKEV 132 (170)
T ss_dssp -------------CGGGCSEEEECCCCB----TT--CCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG--CHHHH
T ss_pred -------------ccCCCCEEEECCCCc----cC--CccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC--CHHHH
Confidence 346799999953110 00 010 001256888888888 9999987654432 23445
Q ss_pred HHHHHHh-cCcc
Q 038592 418 IQEFRDV-FQEL 428 (478)
Q Consensus 418 ~~~l~~v-F~~v 428 (478)
.+.+++. |..+
T Consensus 133 ~~~l~~~gf~~~ 144 (170)
T 3q87_B 133 LARLEERGYGTR 144 (170)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHCCCcEE
Confidence 5556554 5543
No 180
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.51 E-value=1e-06 Score=81.55 Aligned_cols=115 Identities=20% Similarity=0.220 Sum_probs=81.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+....+|++||+++.+++.|++.+....- +++++.+|+.++
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~------------------- 109 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEF------------------- 109 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGC-------------------
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHc-------------------
Confidence 569999999999999998876445899999999999999988753222 799999998764
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
+ .+||+|++|..-... ..-....+++.+.+.| +|++++.+.. ......+.+.+.
T Consensus 110 -------------~-~~~D~v~~~~p~~~~--------~~~~~~~~l~~~~~~l--~~~~~~~~~~--~~~~~~~~~~l~ 163 (207)
T 1wy7_A 110 -------------N-SRVDIVIMNPPFGSQ--------RKHADRPFLLKAFEIS--DVVYSIHLAK--PEVRRFIEKFSW 163 (207)
T ss_dssp -------------C-CCCSEEEECCCCSSS--------STTTTHHHHHHHHHHC--SEEEEEEECC--HHHHHHHHHHHH
T ss_pred -------------C-CCCCEEEEcCCCccc--------cCCchHHHHHHHHHhc--CcEEEEEeCC--cCCHHHHHHHHH
Confidence 1 379999997421111 1113478999999998 6777665432 233344444454
Q ss_pred H
Q 038592 423 D 423 (478)
Q Consensus 423 ~ 423 (478)
+
T Consensus 164 ~ 164 (207)
T 1wy7_A 164 E 164 (207)
T ss_dssp H
T ss_pred H
Confidence 4
No 181
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.51 E-value=1.2e-07 Score=94.92 Aligned_cols=101 Identities=19% Similarity=0.129 Sum_probs=77.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. ..+|++||+++.+++.|++.+....-++++++.+|+.+.+.
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~--------------- 140 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVP--------------- 140 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCG---------------
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccc---------------
Confidence 5699999999999998888764 36899999999999999988642222459999999976431
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|+++..- .++. +.+++.|+|||++++.+.+.
T Consensus 141 ---------------~~~~fD~Iv~~~~~-----------~~~~-----~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 141 ---------------EFSPYDVIFVTVGV-----------DEVP-----ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp ---------------GGCCEEEEEECSBB-----------SCCC-----HHHHHHEEEEEEEEEEBCBG
T ss_pred ---------------cCCCeEEEEEcCCH-----------HHHH-----HHHHHhcCCCcEEEEEECCC
Confidence 23579999996311 1111 57889999999999987543
No 182
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.51 E-value=1.4e-07 Score=94.37 Aligned_cols=116 Identities=14% Similarity=0.101 Sum_probs=73.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CC-----CeEEEEchHHH--HHHHHHhhhcCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GE-----FLQVSVGDAIE--FLEKLARQIVGK 334 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~-----rl~v~v~Dg~~--~l~~~~~~~~~~ 334 (478)
..+||.||||+|.....+......+|++||+++.+++.|++...-.. .. +++++++|... +-.++...
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~---- 124 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREV---- 124 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTT----
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcc----
Confidence 46999999999964433333335799999999999999998753111 10 25677777621 10111110
Q ss_pred CCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 335 NPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++-. . . .....+++ ...++++++++|+|||+|++.+.++
T Consensus 125 --------------------~~~~~FD~V~~~~-~---l-hy~~~~~~--~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 125 --------------------FYFGKFNIIDWQF-A---I-HYSFHPRH--YATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp --------------------CCSSCEEEEEEES-C---G-GGTCSTTT--HHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred --------------------ccCCCeeEEEECc-h---H-HHhCCHHH--HHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 1346899998731 1 0 00011223 2789999999999999999877654
No 183
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.50 E-value=3.9e-08 Score=97.58 Aligned_cols=99 Identities=16% Similarity=0.089 Sum_probs=80.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|.++..+......+|+++|+||..++.+++...+. -.++++++.+|+.++.
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~----------------- 188 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP----------------- 188 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC-----------------
T ss_pred CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc-----------------
Confidence 4699999999999988887775679999999999999999876543 2468999999998873
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....||.|++|. || ...+||..+.++|++||++.+..
T Consensus 189 --------------~~~~~D~Vi~~~-----------p~---~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 189 --------------GENIADRILMGY-----------VV---RTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp --------------CCSCEEEEEECC-----------CS---SGGGGHHHHHHHEEEEEEEEEEE
T ss_pred --------------cccCCCEEEECC-----------CC---cHHHHHHHHHHHcCCCCEEEEEe
Confidence 356799999863 22 24679999999999999987643
No 184
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.50 E-value=2.5e-07 Score=95.08 Aligned_cols=110 Identities=19% Similarity=0.244 Sum_probs=82.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhc--------CCCCCCCeEEEEchHHHHHHHHHhhhc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYF--------GLEDGEFLQVSVGDAIEFLEKLARQIV 332 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~F--------g~~~d~rl~v~v~Dg~~~l~~~~~~~~ 332 (478)
+.+||.||+|.|.++..|.+.. +.+|++||+++.+++.|++.+ |....++++++.+|+.+....
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~------ 157 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATA------ 157 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGC------
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhc------
Confidence 5799999999999998888873 579999999999999999875 312346899999998764210
Q ss_pred CCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 333 GKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+..+.+||+|+...- +...+ -...+|+.+++.|+|||.|++..
T Consensus 158 ------------------~~~~~~~~~fD~V~~~~~-------l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 158 ------------------EPEGVPDSSVDIVISNCV-------CNLST---NKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp ------------------BSCCCCTTCEEEEEEESC-------GGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------ccCCCCCCCEEEEEEccc-------hhcCC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 000124578999998521 11111 13789999999999999999854
No 185
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.50 E-value=3.4e-07 Score=94.57 Aligned_cols=101 Identities=15% Similarity=0.048 Sum_probs=81.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC---------------CCCCeEEEEchHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE---------------DGEFLQVSVGDAIEFLEK 326 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~---------------~d~rl~v~v~Dg~~~l~~ 326 (478)
+.+||.+|+|.|.++..+.... ..+|++||+|+..++.|++..... .-++++++.+|+.+++..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 4699999999999998888875 579999999999999999875321 112399999999999865
Q ss_pred HHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 327 LARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++|.+. ...+|+..+.+.|+++|++.+..
T Consensus 128 -----------------------------~~~~fD~I~lDP~~--------------~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 -----------------------------RHRYFHFIDLDPFG--------------SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp -----------------------------STTCEEEEEECCSS--------------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred -----------------------------ccCCCCEEEeCCCC--------------CHHHHHHHHHHhcCCCCEEEEEe
Confidence 23579999997421 12689999999999999888754
No 186
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.49 E-value=7e-07 Score=82.10 Aligned_cols=147 Identities=12% Similarity=0.084 Sum_probs=84.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC---CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL---DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~---~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+||.||+|.|.++..+.+.. +.+|++||+++.. ..++++++.+|..+.-.. ...|+...
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~-----~~~~~~~i 86 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMN-----NIKNINYI 86 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSC-----CC------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhh-----hhcccccc
Confidence 4689999999999999998875 4799999999931 125688899988654100 00000000
Q ss_pred Ccccc--cCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC----ChHHHHHHHHHccCcCcEEEEEeCCCCchH
Q 038592 340 GACSL--KDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF----VRKDVLLAARLILSDFGIFVMNVIPPNRSF 413 (478)
Q Consensus 340 ~~~~~--~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f----~~~efl~~~~~~L~~~Gilv~N~~~~~~~~ 413 (478)
..... ...+... .....+||+|+.|..-.. .|... +... ....+++.+++.|+|||.|++.+.....
T Consensus 87 ~~~~~~~~~~~~~~--~~~~~~fD~v~~~~~~~~--~g~~~-~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~-- 159 (201)
T 2plw_A 87 DNMNNNSVDYKLKE--ILQDKKIDIILSDAAVPC--IGNKI-DDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ-- 159 (201)
T ss_dssp -----CHHHHHHHH--HHTTCCEEEEEECCCCCC--CSCHH-HHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT--
T ss_pred ccccchhhHHHHHh--hcCCCcccEEEeCCCcCC--CCCcc-cCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC--
Confidence 00000 0000000 003457999999742110 01000 0000 0124788999999999999987765422
Q ss_pred HHHHHHHHHHhcCccEEEe
Q 038592 414 YDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 414 ~~~v~~~l~~vF~~v~~~~ 432 (478)
...+...++..|..+..++
T Consensus 160 ~~~l~~~l~~~f~~v~~~~ 178 (201)
T 2plw_A 160 TNNLKTYLKGMFQLVHTTK 178 (201)
T ss_dssp HHHHHHHHHTTEEEEEECC
T ss_pred HHHHHHHHHHHHheEEEEC
Confidence 3456777788887665543
No 187
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.48 E-value=9e-07 Score=86.18 Aligned_cols=157 Identities=13% Similarity=0.075 Sum_probs=106.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..|.+.. ..+|++||+||..++.|++..... -.++++++.+|+.+.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~--------------- 86 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE--------------- 86 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---------------
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC---------------
Confidence 3589999999999999998874 469999999999999999875321 24689999999988641
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
++.+||+|++- ||- . -+-.+++......|+++|.|+++-... ...+.+.
T Consensus 87 ---------------~~~~~D~Ivia--------gmG---g-~lI~~IL~~~~~~L~~~~~lIlq~~~~----~~~lr~~ 135 (244)
T 3gnl_A 87 ---------------KKDAIDTIVIA--------GMG---G-TLIRTILEEGAAKLAGVTKLILQPNIA----AWQLREW 135 (244)
T ss_dssp ---------------GGGCCCEEEEE--------EEC---H-HHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHH
T ss_pred ---------------ccccccEEEEe--------CCc---h-HHHHHHHHHHHHHhCCCCEEEEEcCCC----hHHHHHH
Confidence 12359999871 221 1 134779999999999999999876543 3345555
Q ss_pred HHHh-cCccEEEee--cccceEEEEEEcCCCCCCcchhhhhhhHHHHH
Q 038592 421 FRDV-FQELYEIDV--GNEENFVLIATGLSIVSSGSDCENAFGKKLRL 465 (478)
Q Consensus 421 l~~v-F~~v~~~~v--~~~~N~Vl~a~~~~~~~~~~~~~~~~~~~l~~ 465 (478)
|.+. |.-+-..-+ .+-.-.|+.+.+.......++.+-.|++.|.+
T Consensus 136 L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~~~~~~~~~~~~~~G~~l~~ 183 (244)
T 3gnl_A 136 SEQNNWLITSEAILREDNKVYEIMVLAPSEKPVTWTKQEIFFGPCLLK 183 (244)
T ss_dssp HHHHTEEEEEEEEEEETTEEEEEEEEEECSSCCCCCHHHHHHCHHHHH
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEEEEeCCCCCCCCHHHHHhCHHHHh
Confidence 6655 553322222 23345677777654333334445556666543
No 188
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.48 E-value=1.2e-06 Score=86.09 Aligned_cols=113 Identities=19% Similarity=0.081 Sum_probs=81.7
Q ss_pred CCeEEEEeCch---hHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH--HHHHH---hhhcC
Q 038592 263 RPKALCVGVGG---GALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF--LEKLA---RQIVG 333 (478)
Q Consensus 263 ~~~VLvIGlGg---G~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~--l~~~~---~~~~~ 333 (478)
..+||.||+|. |.+...+.+. ++.+|++||+||.|++.|++.+. ..++++++.+|..+. +-... ..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~--~~~~v~~~~~D~~~~~~~~~~~~~~~~--- 152 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA--KDPNTAVFTADVRDPEYILNHPDVRRM--- 152 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT--TCTTEEEEECCTTCHHHHHHSHHHHHH---
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC--CCCCeEEEEeeCCCchhhhccchhhcc---
Confidence 46999999999 9887766665 47899999999999999999874 346899999999753 21000 00
Q ss_pred CCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 334 KNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
....+||+|++-. -+..-|.. .-..+|+.+++.|+|||.|++.....
T Consensus 153 ---------------------~d~~~~d~v~~~~-------vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 ---------------------IDFSRPAAIMLVG-------MLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp ---------------------CCTTSCCEEEETT-------TGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred ---------------------CCCCCCEEEEEec-------hhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 0224799999821 11111222 34789999999999999999876554
No 189
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.48 E-value=5.1e-08 Score=93.71 Aligned_cols=44 Identities=18% Similarity=0.177 Sum_probs=38.6
Q ss_pred CCeEEEEeCchhHHHHHHHhh--C-CCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ--L-DFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~--~-~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+||.+|+|+|.++..+.+. . ..+|++||+|+.+++.|++...
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~ 98 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLA 98 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHH
Confidence 569999999999999988876 3 5799999999999999997653
No 190
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.48 E-value=1.2e-06 Score=80.01 Aligned_cols=126 Identities=19% Similarity=0.195 Sum_probs=85.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC----------CEEEEEECChHHHHHHHHhcCCCCCCCeEEE-EchHHHHH--HHHHh
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD----------FEVVGVEMDEVVLRVARQYFGLEDGEFLQVS-VGDAIEFL--EKLAR 329 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~----------~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~-v~Dg~~~l--~~~~~ 329 (478)
..+||.||+|.|.++..|.+..+ .+|++||+++.. . -++++++ .+|....- .....
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------~---~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------P---LEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------C---CTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------c---CCCCeEEEeccCCCHHHHHHHHH
Confidence 46999999999999999998853 799999999941 1 2468888 88865431 11100
Q ss_pred hhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh--------HHHHHHHHHccCcCcE
Q 038592 330 QIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR--------KDVLLAARLILSDFGI 401 (478)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~--------~efl~~~~~~L~~~Gi 401 (478)
. ..+.+||+|+.|.... .. + ....+ ..+++.+.+.|+|||.
T Consensus 92 ~------------------------~~~~~fD~V~~~~~~~-~~-~-----~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 140 (196)
T 2nyu_A 92 V------------------------LPGRRADVILSDMAPN-AT-G-----FRDLDHDRLISLCLTLLSVTPDILQPGGT 140 (196)
T ss_dssp H------------------------SGGGCEEEEEECCCCC-CC-S-----CHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred h------------------------cCCCCCcEEEeCCCCC-CC-C-----CcccCHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 0 0235799999974211 00 0 01111 3789999999999999
Q ss_pred EEEEeCCCCchHHHHHHHHHHHhcCccEEEe
Q 038592 402 FVMNVIPPNRSFYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 402 lv~N~~~~~~~~~~~v~~~l~~vF~~v~~~~ 432 (478)
|++...... . ...+...++..|..+..+.
T Consensus 141 lv~~~~~~~-~-~~~~~~~l~~~f~~v~~~~ 169 (196)
T 2nyu_A 141 FLCKTWAGS-Q-SRRLQRRLTEEFQNVRIIK 169 (196)
T ss_dssp EEEEECCSG-G-GHHHHHHHHHHEEEEEEEC
T ss_pred EEEEecCCc-c-HHHHHHHHHHHhcceEEEC
Confidence 999876552 2 3456777888888776554
No 191
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.47 E-value=1.1e-06 Score=81.19 Aligned_cols=94 Identities=17% Similarity=0.178 Sum_probs=70.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..+.+....+|++||+++.+++.|++.+. +++++.+|+.++
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~------------------- 107 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEI------------------- 107 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGC-------------------
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHC-------------------
Confidence 56999999999999998887733589999999999999999875 689999998764
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
+ .+||+|++|..-.. . +. -....+++.+.+.| |+++++
T Consensus 108 -------------~-~~~D~v~~~~p~~~----~---~~-~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 108 -------------S-GKYDTWIMNPPFGS----V---VK-HSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp -------------C-CCEEEEEECCCC---------------CHHHHHHHHHHE--EEEEEE
T ss_pred -------------C-CCeeEEEECCCchh----c---cC-chhHHHHHHHHHhc--CcEEEE
Confidence 2 57999999631100 0 01 12367999999998 454443
No 192
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.46 E-value=1.2e-07 Score=94.01 Aligned_cols=116 Identities=16% Similarity=0.074 Sum_probs=81.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-------CCCCeEEEEchHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-------DGEFLQVSVGDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-------~d~rl~v~v~Dg~~~l~~~~~~~~~~~ 335 (478)
+.+||.||+|.|.++..+.+....+|+++|+++.+++.|++.+... ...+++++++|+.+..-. .
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~--~------ 106 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLI--D------ 106 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCST--T------
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchh--h------
Confidence 5799999999999888888765679999999999999999876311 234789999998764100 0
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
.+ .....+||+|++.. ... .+ .... .-..+|+.+++.|+|||++++.+...
T Consensus 107 --~~--------------~~~~~~fD~V~~~~----~l~--~~-~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 107 --KF--------------RDPQMCFDICSCQF----VCH--YS-FESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp --TC--------------SSTTCCEEEEEEET----CGG--GG-GGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred --hc--------------ccCCCCEEEEEEec----chh--hc-cCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 00 01235799999842 000 00 0000 12589999999999999999887654
No 193
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.46 E-value=4.3e-07 Score=95.53 Aligned_cols=135 Identities=14% Similarity=0.182 Sum_probs=93.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|..+..|.... + .+|+++|+++..++.+++.+....-++++++.+|+.++...
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~-------------- 325 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI-------------- 325 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS--------------
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh--------------
Confidence 4699999999999999998876 4 79999999999999999875321124699999998754210
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCC-CCC--------CCC-----ChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTS-APP--------VEF-----VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s-~Pp--------~~f-----~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
..+.+||+|++|+..+.. |+. --| ..+ +...+|+.+.+.|+|||.+++-.
T Consensus 326 --------------~~~~~fD~Vl~D~Pcsg~--g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 326 --------------IGEEVADKVLLDAPCTSS--GTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp --------------SCSSCEEEEEEECCCCCG--GGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --------------hccCCCCEEEEcCCCCCC--eeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 123579999999754321 211 011 111 12679999999999999999877
Q ss_pred CCCCchHHHHHHHHHHHhcCc
Q 038592 407 IPPNRSFYDMLIQEFRDVFQE 427 (478)
Q Consensus 407 ~~~~~~~~~~v~~~l~~vF~~ 427 (478)
.+..++--..++..+.+-++.
T Consensus 390 cs~~~~ene~~v~~~l~~~~~ 410 (450)
T 2yxl_A 390 CSIFKEENEKNIRWFLNVHPE 410 (450)
T ss_dssp SCCCGGGTHHHHHHHHHHCSS
T ss_pred CCCChhhHHHHHHHHHHhCCC
Confidence 666544334455555455544
No 194
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.46 E-value=8e-07 Score=92.83 Aligned_cols=134 Identities=18% Similarity=0.162 Sum_probs=92.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.+|+|.|..+..+.+.. +.+|+++|+++..++.+++.+.... -+++++.+|+.++....
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g-~~~~~~~~D~~~~~~~~-------------- 311 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG-MKATVKQGDGRYPSQWC-------------- 311 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEEECCTTCTHHHH--------------
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC-CCeEEEeCchhhchhhc--------------
Confidence 4699999999999999998876 4799999999999999998763211 13789999998764321
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCC-CCCCC--------CC-----ChHHHHHHHHHccCcCcEEEEEeC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGT-SAPPV--------EF-----VRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~-s~Pp~--------~f-----~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
...+||+|++|+..+.. |+ .-.|. .+ +..++++.+.+.|+|||.+++-..
T Consensus 312 --------------~~~~fD~Vl~D~Pcsg~--g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 312 --------------GEQQFDRILLDAPCSAT--GVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp --------------TTCCEEEEEEECCCCCG--GGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred --------------ccCCCCEEEEeCCCCcc--cccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 34679999999844321 21 11111 00 125889999999999999998776
Q ss_pred CCCchHHHHHHHHHHHhcCc
Q 038592 408 PPNRSFYDMLIQEFRDVFQE 427 (478)
Q Consensus 408 ~~~~~~~~~v~~~l~~vF~~ 427 (478)
+..++--..++..+-+-++.
T Consensus 376 s~~~~ene~~v~~~l~~~~~ 395 (429)
T 1sqg_A 376 SVLPEENSLQIKAFLQRTAD 395 (429)
T ss_dssp CCCGGGTHHHHHHHHHHCTT
T ss_pred CCChhhHHHHHHHHHHhCCC
Confidence 55433333444444444443
No 195
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.45 E-value=4.7e-07 Score=87.28 Aligned_cols=101 Identities=24% Similarity=0.241 Sum_probs=77.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.+|++||+++.+++.|++... . .++.+|+.++-
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~l~~a~~~~~----~--~~~~~d~~~~~------------------ 109 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER-GFEVVLVDPSKEMLEVAREKGV----K--NVVEAKAEDLP------------------ 109 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT-TCEEEEEESCHHHHHHHHHHTC----S--CEEECCTTSCC------------------
T ss_pred CCeEEEeCCCcCHHHHHHHHc-CCeEEEEeCCHHHHHHHHhhcC----C--CEEECcHHHCC------------------
Confidence 579999999999999988876 6799999999999999998864 1 27777765430
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+.+||+|++.-.- ...++. ...+++.+++.|+|||.+++.+.++
T Consensus 110 ------------~~~~~fD~v~~~~~~------~~~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 110 ------------FPSGAFEAVLALGDV------LSYVEN---KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp ------------SCTTCEEEEEECSSH------HHHCSC---HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred ------------CCCCCEEEEEEcchh------hhcccc---HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 135679999983100 000111 4789999999999999999887664
No 196
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.45 E-value=6.7e-07 Score=86.05 Aligned_cols=155 Identities=18% Similarity=0.088 Sum_probs=103.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. ..+|++||++|..++.|++..... -.++++++.+|+.+-+.
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~--------------- 80 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFE--------------- 80 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---------------
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcc---------------
Confidence 3589999999999999998874 469999999999999999875321 24589999999987541
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
...+||+|++- ||- .. +-.+++..+...|+++|.|+++-... ...+.+.
T Consensus 81 ---------------~~~~~D~Ivia--------G~G---g~-~i~~Il~~~~~~L~~~~~lVlq~~~~----~~~vr~~ 129 (225)
T 3kr9_A 81 ---------------ETDQVSVITIA--------GMG---GR-LIARILEEGLGKLANVERLILQPNNR----EDDLRIW 129 (225)
T ss_dssp ---------------GGGCCCEEEEE--------EEC---HH-HHHHHHHHTGGGCTTCCEEEEEESSC----HHHHHHH
T ss_pred ---------------cCcCCCEEEEc--------CCC---hH-HHHHHHHHHHHHhCCCCEEEEECCCC----HHHHHHH
Confidence 12269999872 221 11 34789999999999999999977632 2344445
Q ss_pred HHHh-cCccEEEee--cccceEEEEEEcCCCCCCcchhhhhhhHHHHH
Q 038592 421 FRDV-FQELYEIDV--GNEENFVLIATGLSIVSSGSDCENAFGKKLRL 465 (478)
Q Consensus 421 l~~v-F~~v~~~~v--~~~~N~Vl~a~~~~~~~~~~~~~~~~~~~l~~ 465 (478)
|.+. |.-+-..-+ .+-.-.|+.+.+.+.. .++.+-.|++.|.+
T Consensus 130 L~~~Gf~i~~e~lv~e~~~~Yeii~~~~~~~~--~~~~~~~~G~~l~~ 175 (225)
T 3kr9_A 130 LQDHGFQIVAESILEEAGKFYEILVVEAGQMK--LSASDVRFGPFLSK 175 (225)
T ss_dssp HHHTTEEEEEEEEEEETTEEEEEEEEEESCCC--CCHHHHHHCTTHHH
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEEEEeCCCC--CCHHHHHhCHHHHh
Confidence 5544 443222212 2223467777765432 23334455555533
No 197
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.44 E-value=7.4e-07 Score=90.38 Aligned_cols=111 Identities=18% Similarity=0.114 Sum_probs=80.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|+++..+.... +.+|+++|+|+.+++.|++.+....-++++++.+|+.++..
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~--------------- 268 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPR--------------- 268 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGG---------------
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcc---------------
Confidence 4689999999999998888753 58999999999999999987642211279999999988631
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC--ChHHHHHHHHHccCcCcEEEEEeC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF--VRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f--~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
....||+|++|..-+... .+...+ +-..+++.+++.|+|||.+++-..
T Consensus 269 ---------------~~~~~D~Ii~npPyg~r~----~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 269 ---------------FFPEVDRILANPPHGLRL----GRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ---------------TCCCCSEEEECCCSCC--------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred ---------------ccCCCCEEEECCCCcCcc----CCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 234589999974221110 000111 116799999999999999997544
No 198
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.44 E-value=7.4e-07 Score=90.96 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=77.0
Q ss_pred CCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 262 FRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
...+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|++.+.-. ..++++++.+|..+.
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~---------------- 264 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFET---------------- 264 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTC----------------
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCC----------------
Confidence 36799999999999998888775 689999999 99999999887422 247899999998721
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N 405 (478)
.+. .||+|++--- + ..+-+ ..+|+.+++.|+|||.+++.
T Consensus 265 ---------------~p~-~~D~v~~~~v-------l----h~~~d~~~~~~L~~~~~~L~pgG~l~i~ 306 (369)
T 3gwz_A 265 ---------------IPD-GADVYLIKHV-------L----HDWDDDDVVRILRRIATAMKPDSRLLVI 306 (369)
T ss_dssp ---------------CCS-SCSEEEEESC-------G----GGSCHHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ---------------CCC-CceEEEhhhh-------h----ccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 122 7999998310 1 11222 36999999999999999874
No 199
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.44 E-value=2.1e-07 Score=89.89 Aligned_cols=95 Identities=16% Similarity=0.246 Sum_probs=76.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|+|.++..+.+.. +.+|++||+++.+++.|++.. +++.++.+|+.+.-
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~----------------- 143 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLP----------------- 143 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCS-----------------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCC-----------------
Confidence 5799999999999998888875 689999999999999999875 46788898875430
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..+..||+|+.- +. + .+++.+++.|+|||.+++.....
T Consensus 144 -------------~~~~~fD~v~~~-~~----------~------~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 144 -------------FSDTSMDAIIRI-YA----------P------CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp -------------BCTTCEEEEEEE-SC----------C------CCHHHHHHHEEEEEEEEEEEECT
T ss_pred -------------CCCCceeEEEEe-CC----------h------hhHHHHHHhcCCCcEEEEEEcCH
Confidence 135679999972 11 1 25889999999999999877655
No 200
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.43 E-value=4.2e-07 Score=84.57 Aligned_cols=101 Identities=16% Similarity=0.192 Sum_probs=77.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+. +.+++++|+++.+++.|++.+. +++.+|+.++..
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~-~~~~~~~D~~~~~~~~~~~~~~-------~~~~~d~~~~~~----------------- 87 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN-GTRVSGIEAFPEAAEQAKEKLD-------HVVLGDIETMDM----------------- 87 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT-TCEEEEEESSHHHHHHHHTTSS-------EEEESCTTTCCC-----------------
T ss_pred CCcEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHhCC-------cEEEcchhhcCC-----------------
Confidence 579999999999999999887 6899999999999999998752 677888764310
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
+..+.+||+|++.- ....+ + -...+++.+++.|+|||.+++.+...
T Consensus 88 -----------~~~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 88 -----------PYEEEQFDCVIFGD----VLEHL---F---DPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp -----------CSCTTCEEEEEEES----CGGGS---S---CHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred -----------CCCCCccCEEEECC----hhhhc---C---CHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 11356899999841 11011 1 12689999999999999999877554
No 201
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.42 E-value=1.3e-06 Score=84.32 Aligned_cols=155 Identities=17% Similarity=0.060 Sum_probs=105.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. ..+|++||+||..++.|++..... -.++++++.+|+.+.+.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~--------------- 86 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE--------------- 86 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC---------------
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc---------------
Confidence 3589999999999999998874 469999999999999999876321 24689999999988641
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
+..+||+|++- ||- . -+-.+++......|+++|.|+++-... .+.+.+.
T Consensus 87 ---------------~~~~~D~Ivia--------GmG---g-~lI~~IL~~~~~~l~~~~~lIlqp~~~----~~~lr~~ 135 (230)
T 3lec_A 87 ---------------EADNIDTITIC--------GMG---G-RLIADILNNDIDKLQHVKTLVLQPNNR----EDDLRKW 135 (230)
T ss_dssp ---------------GGGCCCEEEEE--------EEC---H-HHHHHHHHHTGGGGTTCCEEEEEESSC----HHHHHHH
T ss_pred ---------------cccccCEEEEe--------CCc---h-HHHHHHHHHHHHHhCcCCEEEEECCCC----hHHHHHH
Confidence 22369999872 221 1 134779999999999999999876543 3344455
Q ss_pred HHHh-cCccEEEeec--ccceEEEEEEcCCCCCCcchhhhhhhHHHHH
Q 038592 421 FRDV-FQELYEIDVG--NEENFVLIATGLSIVSSGSDCENAFGKKLRL 465 (478)
Q Consensus 421 l~~v-F~~v~~~~v~--~~~N~Vl~a~~~~~~~~~~~~~~~~~~~l~~ 465 (478)
|.+. |.-+-..-+. +-.-.|+.+.+.+.. .++.+-.|++.|.+
T Consensus 136 L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~~~~--~~~~~~~~G~~l~~ 181 (230)
T 3lec_A 136 LAANDFEIVAEDILTENDKRYEILVVKHGHMN--LTAKELRFGPFLLS 181 (230)
T ss_dssp HHHTTEEEEEEEEEEC--CEEEEEEEEECCCC--CCHHHHHHCHHHHH
T ss_pred HHHCCCEEEEEEEEEECCEEEEEEEEEeCCCC--CCHHHHHhCHHHhh
Confidence 5554 4432222222 233567777766432 33445556666644
No 202
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.40 E-value=3.8e-07 Score=91.38 Aligned_cols=100 Identities=17% Similarity=0.087 Sum_probs=77.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|++++.-. ..++++++.+|..+-
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------------- 231 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP----------------- 231 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-----------------
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC-----------------
Confidence 5799999999999998888764 689999999 99999999886421 247899999998621
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~ 406 (478)
.+. .||+|++-- . + ..+-+ ..+|+++++.|+|||.+++.-
T Consensus 232 --------------~p~-~~D~v~~~~----v---l----h~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 232 --------------LPA-GAGGYVLSA----V---L----HDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp --------------CCC-SCSEEEEES----C---G----GGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred --------------CCC-CCcEEEEeh----h---h----ccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 122 799999821 0 1 11222 689999999999999998754
No 203
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.40 E-value=8.6e-07 Score=87.13 Aligned_cols=115 Identities=14% Similarity=0.085 Sum_probs=74.9
Q ss_pred CCeEEEEeCchhHHHHH----HHhh-CCCEE--EEEECChHHHHHHHHhcCCC-CCCCe--EEEEchHHHHHHHHHhhhc
Q 038592 263 RPKALCVGVGGGALVSF----LRTQ-LDFEV--VGVEMDEVVLRVARQYFGLE-DGEFL--QVSVGDAIEFLEKLARQIV 332 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~----L~~~-~~~~V--~~VEiDp~Vl~vA~~~Fg~~-~d~rl--~v~v~Dg~~~l~~~~~~~~ 332 (478)
+.+||.||+|+|.++.. +... ++.+| ++||+++.|++.|++.+.-. .-+++ .+..+|+.++..+...
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--- 129 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE--- 129 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT---
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc---
Confidence 46899999999976542 2222 35654 99999999999999886321 11334 4556777666432110
Q ss_pred CCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCc
Q 038592 333 GKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNR 411 (478)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~ 411 (478)
+..+.+||+|++-. ....+ + --..+|+.++++|+|||.+++-..+.+.
T Consensus 130 ---------------------~~~~~~fD~V~~~~----~l~~~---~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~ 177 (292)
T 2aot_A 130 ---------------------KKELQKWDFIHMIQ----MLYYV---K---DIPATLKFFHSLLGTNAKMLIIVVSGSS 177 (292)
T ss_dssp ---------------------TTCCCCEEEEEEES----CGGGC---S---CHHHHHHHHHHTEEEEEEEEEEEECTTS
T ss_pred ---------------------ccCCCceeEEEEee----eeeec---C---CHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 01356899999831 10001 1 1367999999999999999986655543
No 204
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.38 E-value=2.8e-07 Score=89.00 Aligned_cols=97 Identities=18% Similarity=0.085 Sum_probs=74.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+.+ .+.+|++||+++.+++.|++.. +++++++|+.++-
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~------------------ 89 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALAN-QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLA------------------ 89 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHT-TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCC------------------
T ss_pred CCEEEEEcCcccHHHHHHHh-CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCC------------------
Confidence 67999999999999998887 5789999999999999887653 7999999986530
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
..+.+||+|++-.- +...+ --..+++.+++.|+ ||.+++...
T Consensus 90 ------------~~~~~fD~v~~~~~-------l~~~~---~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 90 ------------LPDKSVDGVISILA-------IHHFS---HLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp ------------SCTTCBSEEEEESC-------GGGCS---SHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred ------------CCCCCEeEEEEcch-------Hhhcc---CHHHHHHHHHHHhC-CcEEEEEEc
Confidence 14578999998421 10011 23789999999999 996655443
No 205
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.38 E-value=6e-07 Score=93.16 Aligned_cols=101 Identities=14% Similarity=0.092 Sum_probs=81.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C-CEEEEEECChHHHHHHHHhcCCCC-CCC-eEEEEchHHHHHH-HHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D-FEVVGVEMDEVVLRVARQYFGLED-GEF-LQVSVGDAIEFLE-KLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~-~~V~~VEiDp~Vl~vA~~~Fg~~~-d~r-l~v~v~Dg~~~l~-~~~~~~~~~~~~ 337 (478)
..+||.+++|.|+++..+.... + .+|++||+++..++.+++...+.. +++ ++++.+|+.++++ +
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~----------- 121 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKE----------- 121 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSC-----------
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHh-----------
Confidence 4689999999999998888764 4 599999999999999998875432 345 9999999999986 4
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|++|.+. ...+|+..+.+.|++||++.+-.
T Consensus 122 ------------------~~~~fD~V~lDP~g--------------~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 122 ------------------WGFGFDYVDLDPFG--------------TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ------------------CSSCEEEEEECCSS--------------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------hCCCCcEEEECCCc--------------CHHHHHHHHHHHhCCCCEEEEEe
Confidence 23569999998621 01569999999999999888744
No 206
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.37 E-value=2.8e-06 Score=83.47 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=74.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEEC-ChHHHHHHHHhc-----CCCC-C----CCeEEEEch---HHHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEM-DEVVLRVARQYF-----GLED-G----EFLQVSVGD---AIEFLEKLA 328 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEi-Dp~Vl~vA~~~F-----g~~~-d----~rl~v~v~D---g~~~l~~~~ 328 (478)
..+||.||+|.|.++..+.+....+|++||+ ++.+++.|++.. .... . ++++++..| ...-+....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 159 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT 159 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc
Confidence 4699999999999998888754359999999 999999999887 2211 1 468887433 222221100
Q ss_pred hhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEE-eCCCCCCCCCCCCCCCCCChHHHHHHHHHccC---c--CcEE
Q 038592 329 RQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMV-DLDSGDARNGTSAPPVEFVRKDVLLAARLILS---D--FGIF 402 (478)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIiv-Dv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~---~--~Gil 402 (478)
...+||+|+. |+.-. ++ .-..+++.++++|+ | ||.+
T Consensus 160 ---------------------------~~~~fD~Ii~~dvl~~--------~~---~~~~ll~~l~~~Lk~~~p~~gG~l 201 (281)
T 3bzb_A 160 ---------------------------GLQRFQVVLLADLLSF--------HQ---AHDALLRSVKMLLALPANDPTAVA 201 (281)
T ss_dssp ---------------------------SCSSBSEEEEESCCSC--------GG---GHHHHHHHHHHHBCCTTTCTTCEE
T ss_pred ---------------------------cCCCCCEEEEeCcccC--------hH---HHHHHHHHHHHHhcccCCCCCCEE
Confidence 2467999987 54211 11 24789999999999 9 9987
Q ss_pred EEEeCC
Q 038592 403 VMNVIP 408 (478)
Q Consensus 403 v~N~~~ 408 (478)
++-+..
T Consensus 202 ~v~~~~ 207 (281)
T 3bzb_A 202 LVTFTH 207 (281)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 765444
No 207
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.37 E-value=5.3e-07 Score=93.74 Aligned_cols=97 Identities=21% Similarity=0.350 Sum_probs=71.2
Q ss_pred CCeEEEEeCc-------hhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH--HHHHHHhhhc
Q 038592 263 RPKALCVGVG-------GGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE--FLEKLARQIV 332 (478)
Q Consensus 263 ~~~VLvIGlG-------gG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~--~l~~~~~~~~ 332 (478)
+.+||.||+| +|....++.+++ +.+|++||+++.+. + ..++++++++|+.+ |..+...
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~---~~~rI~fv~GDa~dlpf~~~l~~--- 284 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V---DELRIRTIQGDQNDAEFLDRIAR--- 284 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G---CBTTEEEEECCTTCHHHHHHHHH---
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h---cCCCcEEEEecccccchhhhhhc---
Confidence 6899999999 566555566654 78999999999972 1 35789999999865 5543322
Q ss_pred CCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 333 GKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
...+||+|+.|... . . . -...+|+.+++.|+|||+|++.
T Consensus 285 -----------------------~d~sFDlVisdgsH-~-------~-~--d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 285 -----------------------RYGPFDIVIDDGSH-I-------N-A--HVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp -----------------------HHCCEEEEEECSCC-C-------H-H--HHHHHHHHHGGGEEEEEEEEEE
T ss_pred -----------------------ccCCccEEEECCcc-c-------c-h--hHHHHHHHHHHhcCCCeEEEEE
Confidence 23579999986311 0 0 0 1367899999999999999984
No 208
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.36 E-value=7.6e-07 Score=89.24 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=86.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEEC----ChHHHHHHH-HhcCCCCCCCeEEEEc-hHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEM----DEVVLRVAR-QYFGLEDGEFLQVSVG-DAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEi----Dp~Vl~vA~-~~Fg~~~d~rl~v~v~-Dg~~~l~~~~~~~~~~~~ 336 (478)
..+||.||+|.|.++.++.+. .+|++||+ .+..++.+. +-. ..++++++.+ |...+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~D~~~l------------- 144 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMSTY---GWNLVRLQSGVDVFFI------------- 144 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCCST---TGGGEEEECSCCTTTS-------------
T ss_pred CCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhhhc---CCCCeEEEeccccccC-------------
Confidence 369999999999999999887 58999999 443322110 101 1256888888 76543
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChH----HHHHHHHHccCcCcEEEEEeCCCCch
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRK----DVLLAARLILSDFGIFVMNVIPPNRS 412 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~----efl~~~~~~L~~~Gilv~N~~~~~~~ 412 (478)
+..+||+|++|+... . |. .+.+. .+|..+++.|+|||.|++.+......
T Consensus 145 -------------------~~~~fD~V~sd~~~~--~-g~-----~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~~~~ 197 (305)
T 2p41_A 145 -------------------PPERCDTLLCDIGES--S-PN-----PTVEAGRTLRVLNLVENWLSNNTQFCVKVLNPYMS 197 (305)
T ss_dssp -------------------CCCCCSEEEECCCCC--C-SS-----HHHHHHHHHHHHHHHHHHCCTTCEEEEEESCCCSH
T ss_pred -------------------CcCCCCEEEECCccc--c-Cc-----chhhHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc
Confidence 345799999986321 1 11 11111 47888999999999999988876544
Q ss_pred HHHHHHHHHHHhcCccEEE
Q 038592 413 FYDMLIQEFRDVFQELYEI 431 (478)
Q Consensus 413 ~~~~v~~~l~~vF~~v~~~ 431 (478)
....++..+++.|..+...
T Consensus 198 ~~~~~l~~l~~~f~~v~~~ 216 (305)
T 2p41_A 198 SVIEKMEALQRKHGGALVR 216 (305)
T ss_dssp HHHHHHHHHHHHHCCEEEC
T ss_pred hHHHHHHHHHHHcCCEEEe
Confidence 4567788889999887654
No 209
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.33 E-value=1e-06 Score=89.61 Aligned_cols=101 Identities=16% Similarity=0.111 Sum_probs=74.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+|+.||+|.|.++..|.+.. +.++++.|+ |.|++.|+++......+|++++.+|..+-
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~------------------ 240 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD------------------ 240 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS------------------
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC------------------
Confidence 5799999999999888877764 789999998 89999999998766678999999996421
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
+...+|+|++-- . +..=|.. .....|+++++.|+|||.+++
T Consensus 241 --------------~~~~~D~~~~~~----v---lh~~~d~-~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 241 --------------PLPEADLYILAR----V---LHDWADG-KCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp --------------CCCCCSEEEEES----S---GGGSCHH-HHHHHHHHHHHHCCTTCEEEE
T ss_pred --------------CCCCceEEEeee----e---cccCCHH-HHHHHHHHHHhhCCCCCEEEE
Confidence 234589999821 0 1000110 125789999999999997766
No 210
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.32 E-value=7.9e-07 Score=90.58 Aligned_cols=105 Identities=12% Similarity=0.041 Sum_probs=76.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|++.+.-. ..+|++++.+|..+.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----------------- 241 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDR----------------- 241 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSS-----------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEcccccc-----------------
Confidence 6799999999999998887764 789999999 99999999987532 236899999997542
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
+..-...||+|++--- +..-+.. ....+|+.+++.|+|||.+++.
T Consensus 242 ------------~~~~p~~~D~v~~~~v-------lh~~~~~-~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 242 ------------DVPFPTGFDAVWMSQF-------LDCFSEE-EVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp ------------SCCCCCCCSEEEEESC-------STTSCHH-HHHHHHHHHHHHCCTTCEEEEE
T ss_pred ------------CCCCCCCcCEEEEech-------hhhCCHH-HHHHHHHHHHHhcCCCcEEEEE
Confidence 0001257999998210 1000100 1247899999999999988773
No 211
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.32 E-value=4.4e-07 Score=96.48 Aligned_cols=104 Identities=19% Similarity=0.147 Sum_probs=75.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.+++++.+....+|++||+++ +++.|++.+... ..++++++.+|..++-
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~----------------- 220 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS----------------- 220 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC-----------------
T ss_pred CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc-----------------
Confidence 579999999999999999886567999999999 889998765321 2368999999987640
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|+.+... ...... -..+.+..+++.|+|||++++..
T Consensus 221 --------------~~~~fD~Ivs~~~~-------~~~~~e-~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 221 --------------LPEQVDIIISEPMG-------YMLFNE-RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp --------------CSSCEEEEECCCCH-------HHHTCH-HHHHHHHHGGGGEEEEEEEESCE
T ss_pred --------------cCCCeEEEEEeCch-------HhcCcH-HHHHHHHHHHHhcCCCCEEEEEe
Confidence 23579999984210 000000 11456677889999999998543
No 212
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.32 E-value=2.3e-07 Score=91.18 Aligned_cols=126 Identities=15% Similarity=0.060 Sum_probs=86.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC---CCCCeEEE--EchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE---DGEFLQVS--VGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~---~d~rl~v~--v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.||+|.|.++..+.+. .+|++||+++ ++..|++. ... .+.++.++ .+|+.++
T Consensus 75 g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~-~~~~~~~~~~v~~~~~~~D~~~l-------------- 136 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEV-PRITESYGWNIVKFKSRVDIHTL-------------- 136 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCC-CCCCCBTTGGGEEEECSCCTTTS--------------
T ss_pred CCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhh-hhhhhccCCCeEEEecccCHhHC--------------
Confidence 458999999999999988876 7999999999 43322211 111 01157777 7787653
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh----HHHHHHHHHccCcCc--EEEEEeCCCCc
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR----KDVLLAARLILSDFG--IFVMNVIPPNR 411 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~----~efl~~~~~~L~~~G--ilv~N~~~~~~ 411 (478)
++.+||+|++|.. ... +....+ ..+|..+++.|+||| .|++-+..+..
T Consensus 137 ------------------~~~~fD~V~sd~~--~~~------~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~ 190 (265)
T 2oxt_A 137 ------------------PVERTDVIMCDVG--ESS------PKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYS 190 (265)
T ss_dssp ------------------CCCCCSEEEECCC--CCC------SCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTS
T ss_pred ------------------CCCCCcEEEEeCc--ccC------CccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCC
Confidence 3567999999864 111 111111 137899999999999 99998877544
Q ss_pred hHHHHHHHHHHHhcCccEEEe
Q 038592 412 SFYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 412 ~~~~~v~~~l~~vF~~v~~~~ 432 (478)
......+..+++.|..+....
T Consensus 191 ~~~~~~l~~l~~~f~~v~~~k 211 (265)
T 2oxt_A 191 VEVMERLSVMQRKWGGGLVRN 211 (265)
T ss_dssp HHHHHHHHHHHHHHCCEEECC
T ss_pred hhHHHHHHHHHHHcCCEEEEE
Confidence 333356778888998765554
No 213
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.31 E-value=3.8e-07 Score=90.17 Aligned_cols=127 Identities=16% Similarity=0.082 Sum_probs=87.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC---CCCCeEEE--EchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE---DGEFLQVS--VGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~---~d~rl~v~--v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.||+|.|.++..+.+. .+|++||+++ ++..|++. ... .+.++.++ .+|+.++
T Consensus 83 g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~-~~~~~~~~~~v~~~~~~~D~~~l-------------- 144 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEK-PRLVETFGWNLITFKSKVDVTKM-------------- 144 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCC-CCCCCCTTGGGEEEECSCCGGGC--------------
T ss_pred CCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhc-hhhhhhcCCCeEEEeccCcHhhC--------------
Confidence 468999999999999988877 7999999999 43333221 111 11267888 8887653
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCC---hHHHHHHHHHccCcCc--EEEEEeCCCCch
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFV---RKDVLLAARLILSDFG--IFVMNVIPPNRS 412 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~---~~efl~~~~~~L~~~G--ilv~N~~~~~~~ 412 (478)
++.+||+|++|.. .. . +...+- ...+|+.+.+.|+||| .|++.+..+...
T Consensus 145 ------------------~~~~fD~Vvsd~~--~~-~----~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~~ 199 (276)
T 2wa2_A 145 ------------------EPFQADTVLCDIG--ES-N----PTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYSC 199 (276)
T ss_dssp ------------------CCCCCSEEEECCC--CC-C----SCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCSH
T ss_pred ------------------CCCCcCEEEECCC--cC-C----CchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCch
Confidence 3567999999853 11 0 111111 1137899999999999 999988776444
Q ss_pred HHHHHHHHHHHhcCccEEEe
Q 038592 413 FYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 413 ~~~~v~~~l~~vF~~v~~~~ 432 (478)
.....+..+++.|..+...+
T Consensus 200 ~~~~~l~~l~~~f~~v~v~P 219 (276)
T 2wa2_A 200 DVLEALMKMQARFGGGLIRV 219 (276)
T ss_dssp HHHHHHHHHHHHHCCEEECC
T ss_pred hHHHHHHHHHHHcCCEEEEc
Confidence 34456778888998776554
No 214
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.29 E-value=8.2e-07 Score=82.96 Aligned_cols=107 Identities=14% Similarity=0.022 Sum_probs=73.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHH----HHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVA----RQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA----~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.||+|.|.++..|.+.. +.+|++||+++.+++.+ ++......-++++++++|+.++-
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~------------- 94 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP------------- 94 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-------------
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-------------
Confidence 4689999999999999998876 68999999999988853 22221122357999999987631
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCC-CCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-NGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
..... |.|++........ ..+ + -...+++.+++.|+|||.+++.+
T Consensus 95 -----------------~~~~~-d~v~~~~~~~~~~~~~~---~---~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 95 -----------------PLSGV-GELHVLMPWGSLLRGVL---G---SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp -----------------SCCCE-EEEEEESCCHHHHHHHH---T---SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred -----------------CCCCC-CEEEEEccchhhhhhhh---c---cHHHHHHHHHHHcCCCcEEEEEe
Confidence 12334 7777533110000 000 0 01679999999999999999854
No 215
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.28 E-value=6.3e-07 Score=84.37 Aligned_cols=97 Identities=9% Similarity=0.092 Sum_probs=70.8
Q ss_pred CCeEEEEeCchhHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCC-CeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGE-FLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~-rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+||.||||.|.++..+... +..+++++|+|+.++++|++.+....-+ ++++ .|...-.
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~---------------- 111 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV---------------- 111 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH----------------
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC----------------
Confidence 679999999999999888776 4689999999999999999987532222 4444 6665432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh--HHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR--KDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~--~efl~~~~~~L~~~Gilv~ 404 (478)
....||+|+. ++- -++++ +..+..+.+.|+|+|+||.
T Consensus 112 ---------------~~~~~DvVLa--~k~----------LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 112 ---------------YKGTYDVVFL--LKM----------LPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp ---------------TTSEEEEEEE--ETC----------HHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred ---------------CCCCcChhhH--hhH----------HHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 4678999998 221 11121 1345589999999998873
No 216
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.27 E-value=1.3e-06 Score=91.77 Aligned_cols=103 Identities=12% Similarity=-0.020 Sum_probs=74.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHH-------HHhcCCCC--CCCeEEEEchHHH---HHHHHHh
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVA-------RQYFGLED--GEFLQVSVGDAIE---FLEKLAR 329 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA-------~~~Fg~~~--d~rl~v~v~Dg~~---~l~~~~~ 329 (478)
..+||.||+|.|.++..+.+..+ .+|++||+++.+++.| ++.+.... -.+++++.+|+.. .+..
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~--- 319 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE--- 319 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH---
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc---
Confidence 56999999999999999988654 6899999999999999 76542111 2579999987652 1211
Q ss_pred hhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 330 QIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....||+|++...- . .+ --..+|+.+.+.|+|||.+++-
T Consensus 320 --------------------------~~~~FDvIvvn~~l-------~-~~---d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 320 --------------------------LIPQCDVILVNNFL-------F-DE---DLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp --------------------------HGGGCSEEEECCTT-------C-CH---HHHHHHHHHHTTCCTTCEEEES
T ss_pred --------------------------ccCCCCEEEEeCcc-------c-cc---cHHHHHHHHHHhCCCCeEEEEe
Confidence 12469999983110 0 01 1256789999999999999873
No 217
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.25 E-value=2.2e-06 Score=92.78 Aligned_cols=65 Identities=18% Similarity=0.236 Sum_probs=55.6
Q ss_pred CCCCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHH
Q 038592 261 GFRPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEK 326 (478)
Q Consensus 261 g~~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~ 326 (478)
+.|.|||.||||+|.++..|.+. +.+|++||+++..+++|+.+..-...-++++.++|+.++...
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~-ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 129 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK-GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAA 129 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHhC-CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhh
Confidence 34789999999999999999875 889999999999999999997543334689999999998754
No 218
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.25 E-value=8.7e-07 Score=91.19 Aligned_cols=106 Identities=19% Similarity=0.216 Sum_probs=75.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+||.+|+|.|.++..+.++. ..+|++||+|+.++++| ++++++.+|..++.
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~---------------- 94 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWE---------------- 94 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCC----------------
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcC----------------
Confidence 4599999999999998888763 57999999999999888 47899999988651
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCC--CC--CCCC---------------CCChHHHHHHHHHccCcCcE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNG--TS--APPV---------------EFVRKDVLLAARLILSDFGI 401 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g--~s--~Pp~---------------~f~~~efl~~~~~~L~~~Gi 401 (478)
...+||+|+.+.-=...... +. +++. .=....|++.+.++|+++|.
T Consensus 95 ---------------~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~ 159 (421)
T 2ih2_A 95 ---------------PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGV 159 (421)
T ss_dssp ---------------CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEE
T ss_pred ---------------ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCE
Confidence 34679999995311100000 00 0000 00123789999999999999
Q ss_pred EEEEeCC
Q 038592 402 FVMNVIP 408 (478)
Q Consensus 402 lv~N~~~ 408 (478)
+++-+..
T Consensus 160 ~~~i~p~ 166 (421)
T 2ih2_A 160 LVFVVPA 166 (421)
T ss_dssp EEEEEEG
T ss_pred EEEEECh
Confidence 9876644
No 219
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.24 E-value=2.8e-06 Score=83.43 Aligned_cols=105 Identities=11% Similarity=0.086 Sum_probs=71.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|+|.++..|.+. +.+|++||+++.+++.|++.+... .+.....|.-.-+..
T Consensus 46 g~~VLDlGcGtG~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~~~~~---------------- 105 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALER-GASVTVFDFSQRMCDDLAEALADR---CVTIDLLDITAEIPK---------------- 105 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTSCCCG----------------
T ss_pred cCEEEEEeCcchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhc---cceeeeeeccccccc----------------
Confidence 569999999999999988875 679999999999999999987532 233333332110000
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
....+||+|+++.-- ..+ ++. -...+++.+.++| |||.+++.+..
T Consensus 106 ------------~~~~~fD~Vv~~~~l----~~~--~~~--~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 106 ------------ELAGHFDFVLNDRLI----NRF--TTE--EARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp ------------GGTTCCSEEEEESCG----GGS--CHH--HHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ------------ccCCCccEEEEhhhh----HhC--CHH--HHHHHHHHHHHhC-cCcEEEEEecc
Confidence 024579999996210 000 111 1256899999999 99999987643
No 220
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.23 E-value=3.5e-07 Score=87.40 Aligned_cols=111 Identities=15% Similarity=0.091 Sum_probs=74.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCC-----------------------------CCe
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDG-----------------------------EFL 313 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d-----------------------------~rl 313 (478)
+.+||.||+|.|.++..+......+|+++|+++.+++.|++++.-... .++
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v 136 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAI 136 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHE
T ss_pred CCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhh
Confidence 468999999999988777654334999999999999999998753210 025
Q ss_pred -EEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHH
Q 038592 314 -QVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLA 391 (478)
Q Consensus 314 -~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~ 391 (478)
+++.+|..+.... .+....+||+|+.-.. +.+-+..+ .-..+++.
T Consensus 137 ~~~~~~d~~~~~~~--------------------------~~~~~~~fD~v~~~~~-------l~~~~~~~~~~~~~l~~ 183 (265)
T 2i62_A 137 KQVLKCDVTQSQPL--------------------------GGVSLPPADCLLSTLC-------LDAACPDLPAYRTALRN 183 (265)
T ss_dssp EEEEECCTTSSSTT--------------------------TTCCCCCEEEEEEESC-------HHHHCSSHHHHHHHHHH
T ss_pred eeEEEeeeccCCCC--------------------------CccccCCccEEEEhhh-------hhhhcCChHHHHHHHHH
Confidence 6777776543100 0012267999998321 10001111 23678999
Q ss_pred HHHccCcCcEEEEEe
Q 038592 392 ARLILSDFGIFVMNV 406 (478)
Q Consensus 392 ~~~~L~~~Gilv~N~ 406 (478)
++++|+|||.+++..
T Consensus 184 ~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 184 LGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHTTEEEEEEEEEEE
T ss_pred HHhhCCCCcEEEEEe
Confidence 999999999998854
No 221
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.23 E-value=2.4e-06 Score=89.50 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=75.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..|.+. ..+|++||+++.+++.|++.+....-+ ++++.+|+.+++
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~------------------ 350 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVS------------------ 350 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCC------------------
T ss_pred CCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcC------------------
Confidence 469999999999999988875 569999999999999999876432223 899999988763
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
.. +||+|++|. |..=....+++.++. |+|+|++++..
T Consensus 351 -------------~~-~fD~Vv~dP------------Pr~g~~~~~~~~l~~-l~p~givyvsc 387 (425)
T 2jjq_A 351 -------------VK-GFDTVIVDP------------PRAGLHPRLVKRLNR-EKPGVIVYVSC 387 (425)
T ss_dssp -------------CT-TCSEEEECC------------CTTCSCHHHHHHHHH-HCCSEEEEEES
T ss_pred -------------cc-CCCEEEEcC------------CccchHHHHHHHHHh-cCCCcEEEEEC
Confidence 12 799999963 222234668887764 99999988654
No 222
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.22 E-value=5e-07 Score=86.23 Aligned_cols=108 Identities=14% Similarity=0.076 Sum_probs=73.8
Q ss_pred CCeEEEEeCchhHHHHHHHhh-CCCEEEEEECC-hHHHHHH---HHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-LDFEVVGVEMD-EVVLRVA---RQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~~~~V~~VEiD-p~Vl~vA---~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+||.||||+|.++..|.+. ++.+|++||++ +.|++.| ++......-++++++.+|+.++- .
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~-~----------- 92 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLP-F----------- 92 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCC-G-----------
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhh-h-----------
Confidence 468999999999999888864 47899999999 8888877 65443222357999999987651 1
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.....+|.|.+......... .......++|+.+++.|+|||.+++
T Consensus 93 -----------------~~~d~v~~i~~~~~~~~~~~-----~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 93 -----------------ELKNIADSISILFPWGTLLE-----YVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp -----------------GGTTCEEEEEEESCCHHHHH-----HHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred -----------------hccCeEEEEEEeCCCcHHhh-----hhhcchHHHHHHHHHhcCCCcEEEE
Confidence 01245777776421100000 0001125789999999999999998
No 223
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.21 E-value=3.8e-06 Score=87.63 Aligned_cols=103 Identities=18% Similarity=0.127 Sum_probs=75.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCC-EEEEEECChHHHHHHHHh----------cCCCCCCCeEEEEchHHHHHHHHHhhh
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDF-EVVGVEMDEVVLRVARQY----------FGLEDGEFLQVSVGDAIEFLEKLARQI 331 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~----------Fg~~~d~rl~v~v~Dg~~~l~~~~~~~ 331 (478)
..+||.||+|.|.++..+....+. +|++||+++.++++|++. +|+. .++++++.+|..+.--..
T Consensus 174 gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~d---- 248 (438)
T 3uwp_A 174 DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWRE---- 248 (438)
T ss_dssp TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHHH----
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCcccc----
Confidence 468999999999999888876655 699999999999999852 3442 358999999987752110
Q ss_pred cCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 332 VGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.-..+|+|++... .. .| --...|..+.+.|+|||.|++.
T Consensus 249 ------------------------~~~~aDVVf~Nn~---~F-----~p---dl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 249 ------------------------RIANTSVIFVNNF---AF-----GP---EVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp ------------------------HHHTCSEEEECCT---TC-----CH---HHHHHHHHHHTTSCTTCEEEES
T ss_pred ------------------------ccCCccEEEEccc---cc-----Cc---hHHHHHHHHHHcCCCCcEEEEe
Confidence 0125999998311 00 01 1256678889999999999973
No 224
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.20 E-value=9.4e-06 Score=81.46 Aligned_cols=135 Identities=12% Similarity=0.105 Sum_probs=89.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|+.+..|.... ..+|+++|+++..++.+++.+....-.+++++.+|+.++....
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~------------- 169 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSD------------- 169 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTC-------------
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccc-------------
Confidence 4699999999999998888864 4799999999999999998763211246999999988752110
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCC--C---------CCCC-----ChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSA--P---------PVEF-----VRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~--P---------p~~f-----~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+||.|++|+-.+.. |+.- | +..+ ++.++|..+.+.|+ +|.+++
T Consensus 170 --------------~~~~~fD~Vl~D~PcSg~--G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvY 232 (309)
T 2b9e_A 170 --------------PRYHEVHYILLDPSCSGS--GMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVY 232 (309)
T ss_dssp --------------GGGTTEEEEEECCCCCC--------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEE
T ss_pred --------------cccCCCCEEEEcCCcCCC--CCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEE
Confidence 011469999999865321 2211 1 1111 23467888888887 999998
Q ss_pred EeCCCCchHHHHHHHHHHHhcCc
Q 038592 405 NVIPPNRSFYDMLIQEFRDVFQE 427 (478)
Q Consensus 405 N~~~~~~~~~~~v~~~l~~vF~~ 427 (478)
...+-.++.-..++..+.+-++.
T Consensus 233 sTCs~~~~Ene~~v~~~l~~~~~ 255 (309)
T 2b9e_A 233 STCSLCQEENEDVVRDALQQNPG 255 (309)
T ss_dssp EESCCCGGGTHHHHHHHHTTSTT
T ss_pred ECCCCChHHhHHHHHHHHHhCCC
Confidence 87766544444455555554554
No 225
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.20 E-value=4.3e-07 Score=87.18 Aligned_cols=60 Identities=13% Similarity=0.287 Sum_probs=49.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIE 322 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~ 322 (478)
+.+||.+|+|.|.++..+.... +.+|++||+++.+++.|++.+... ..++++++.+|+.+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 127 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKT 127 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTC
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhh
Confidence 5699999999999887777664 689999999999999999876422 23579999999765
No 226
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.19 E-value=5.1e-06 Score=84.09 Aligned_cols=103 Identities=9% Similarity=0.006 Sum_probs=75.9
Q ss_pred CCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 262 FRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
...+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|++.+.-. ..+|++++.+|..+.
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------------- 252 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE---------------- 252 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS----------------
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC----------------
Confidence 36799999999999998888875 689999999 99999999876321 245799999998753
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.-..+|+|++.-- +..-+.. .-..+|+.+++.|+|||.+++.
T Consensus 253 ----------------~~~~~D~v~~~~v-------lh~~~d~-~~~~~l~~~~~~L~pgG~l~i~ 294 (359)
T 1x19_A 253 ----------------SYPEADAVLFCRI-------LYSANEQ-LSTIMCKKAFDAMRSGGRLLIL 294 (359)
T ss_dssp ----------------CCCCCSEEEEESC-------GGGSCHH-HHHHHHHHHHTTCCTTCEEEEE
T ss_pred ----------------CCCCCCEEEEech-------hccCCHH-HHHHHHHHHHHhcCCCCEEEEE
Confidence 1122499998310 1000110 1377899999999999999653
No 227
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.19 E-value=3.5e-06 Score=85.39 Aligned_cols=102 Identities=19% Similarity=0.172 Sum_probs=77.1
Q ss_pred CCCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 262 FRPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
...+||.||+|.|.++..+.+.. +.+++++|+ +.+++.|++.+.-. ..++++++.+|..+.+
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------------- 245 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--------------- 245 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC---------------
Confidence 35799999999999999888875 689999999 99999999876321 2358999999986421
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEeC
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~~ 407 (478)
+ ..||+|++.-- + .++-+ ..+|+.+++.|+|||.+++.-.
T Consensus 246 ----------------~-~~~D~v~~~~v-------l----~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 ----------------P-VTADVVLLSFV-------L----LNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp ----------------S-CCEEEEEEESC-------G----GGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----------------C-CCCCEEEEecc-------c----cCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2 23999998310 1 11222 3799999999999998876443
No 228
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.19 E-value=2.6e-06 Score=84.16 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=70.2
Q ss_pred CCeEEEEeCchhH----HHHHHHhh-C----CCEEEEEECChHHHHHHHHhcC-------C--------------CCC--
Q 038592 263 RPKALCVGVGGGA----LVSFLRTQ-L----DFEVVGVEMDEVVLRVARQYFG-------L--------------EDG-- 310 (478)
Q Consensus 263 ~~~VLvIGlGgG~----L~~~L~~~-~----~~~V~~VEiDp~Vl~vA~~~Fg-------~--------------~~d-- 310 (478)
+.+|+.+|||+|. +++.|.+. . +.+|+++|||+.+++.|++-.- + ..+
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4699999999997 78888776 3 2699999999999999987420 0 001
Q ss_pred --------CCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCC
Q 038592 311 --------EFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVE 382 (478)
Q Consensus 311 --------~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~ 382 (478)
.++++...|..+. .-....+||+|++- + .. +.-+++
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~-----------------------------~~~~~~~fDlI~cr--n--vl--iyf~~~- 229 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEK-----------------------------QYNVPGPFDAIFCR--N--VM--IYFDKT- 229 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCS-----------------------------SCCCCCCEEEEEEC--S--SG--GGSCHH-
T ss_pred eeechhhcccCeEEecccCCC-----------------------------CCCcCCCeeEEEEC--C--ch--HhCCHH-
Confidence 2455555554431 00014579999991 1 10 000111
Q ss_pred CChHHHHHHHHHccCcCcEEEE
Q 038592 383 FVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 383 f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+++.+++.|+|||.|++
T Consensus 230 -~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 230 -TQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp -HHHHHHHHHGGGEEEEEEEEE
T ss_pred -HHHHHHHHHHHHhCCCcEEEE
Confidence 236899999999999999997
No 229
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.18 E-value=2.5e-06 Score=85.81 Aligned_cols=102 Identities=12% Similarity=0.092 Sum_probs=77.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|++++.- ...+|++++.+|..+.-.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--------------- 243 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN--------------- 243 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG---------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc---------------
Confidence 6799999999999998888765 689999999 8999999987642 224689999999765410
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCC---hHHHHHHHHHccCcCcEEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFV---RKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~---~~efl~~~~~~L~~~Gilv~N 405 (478)
.....||+|++-- . + ..+- ...+|+.+++.|+|||.+++.
T Consensus 244 --------------~~~~~~D~v~~~~----v---l----h~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 244 --------------FEGGAADVVMLND----C---L----HYFDAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp --------------GTTCCEEEEEEES----C---G----GGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred --------------cCCCCccEEEEec----c---c----ccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 0234599999821 0 1 0111 268999999999999998874
No 230
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.18 E-value=1.1e-06 Score=85.92 Aligned_cols=44 Identities=9% Similarity=0.030 Sum_probs=36.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+||.||+|.|.++..+......+|++||+++.+++.|++++.
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHh
Confidence 57999999999995544443345799999999999999999864
No 231
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.17 E-value=9e-06 Score=80.83 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=75.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. +.+++++|++ .+++.|++.+.-. ..++++++.+|..+. .
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~-------------- 228 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--D-------------- 228 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--C--------------
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--C--------------
Confidence 5799999999999999888875 6899999999 9999999876321 135799999997653 0
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC---ChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF---VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f---~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....||+|++-- . ...+ ....+++.+++.|+|||.+++.-
T Consensus 229 ---------------~~~~~D~v~~~~----~-------l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 229 ---------------YGNDYDLVLLPN----F-------LHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ---------------CCSCEEEEEEES----C-------GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---------------CCCCCcEEEEcc----h-------hccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 123499999821 0 0111 12589999999999999776643
No 232
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.17 E-value=3.8e-06 Score=78.65 Aligned_cols=96 Identities=23% Similarity=0.282 Sum_probs=73.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+.+||.||+|.|.++..+... +++|+++.+++.|++. +++++.+|+.++-
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~------------------ 97 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------GVFVLKGTAENLP------------------ 97 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------TCEEEECBTTBCC------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------CCEEEEcccccCC------------------
Confidence 469999999999988877654 9999999999999987 5788888875430
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
....+||+|++.- ....+ + -...+++.+++.|+|||.+++....+.
T Consensus 98 ------------~~~~~fD~v~~~~----~l~~~---~---~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 98 ------------LKDESFDFALMVT----TICFV---D---DPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp ------------SCTTCEEEEEEES----CGGGS---S---CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ------------CCCCCeeEEEEcc----hHhhc---c---CHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 1356799999842 10011 1 136899999999999999998776553
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.14 E-value=5.2e-06 Score=82.03 Aligned_cols=60 Identities=27% Similarity=0.266 Sum_probs=51.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+. ..+|++||+|+.+++.|++.+... ..++++++.+|+.++
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT 89 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS
T ss_pred CCEEEEEcCcccHHHHHHHhh-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc
Confidence 468999999999999999876 569999999999999999887532 236899999999765
No 234
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.14 E-value=4.2e-06 Score=80.67 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=76.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChH------HHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEV------VLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVG 333 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~------Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~ 333 (478)
..+||.||+|.|.++..+.+.. ..+|++||+++. +++.|++.+... ..++++++.+| ++....
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~------ 115 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT--NLSDDL------ 115 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC--CTTTCC------
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC--hhhhcc------
Confidence 5699999999999999888874 389999999997 999999887432 23689999998 332110
Q ss_pred CCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 334 KNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
.+....+||+|++.-- ...+ +. ...+++.++.++++||.+++.....
T Consensus 116 -------------------~~~~~~~fD~v~~~~~----l~~~---~~---~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 116 -------------------GPIADQHFDRVVLAHS----LWYF---AS---ANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp -------------------GGGTTCCCSEEEEESC----GGGS---SC---HHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred -------------------CCCCCCCEEEEEEccc----hhhC---CC---HHHHHHHHHHHhCCCCEEEEEEecC
Confidence 0013568999998421 0001 11 2447777788888899999865443
No 235
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.13 E-value=2.7e-06 Score=84.96 Aligned_cols=101 Identities=23% Similarity=0.197 Sum_probs=75.7
Q ss_pred CeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 264 PKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|++.+.-. ..++++++.+|..+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~------------------ 229 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE------------------ 229 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC------------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC------------------
Confidence 799999999999998888875 689999999 99999999876311 136899999997641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....||+|++----.+ + ++. ....+++.+++.|+|||.+++.
T Consensus 230 --------------~~~~~D~v~~~~vl~~----~--~~~--~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 230 --------------VPSNGDIYLLSRIIGD----L--DEA--ASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp --------------CCSSCSEEEEESCGGG----C--CHH--HHHHHHHHHHHHSCTTCEEEEE
T ss_pred --------------CCCCCCEEEEchhccC----C--CHH--HHHHHHHHHHHhcCCCCEEEEE
Confidence 1256999998311000 0 000 1248999999999999998875
No 236
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.11 E-value=5.1e-06 Score=83.79 Aligned_cols=100 Identities=22% Similarity=0.257 Sum_probs=75.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. +.+++++|+ +.+++.|++.+.-. ..++++++.+|..+.+
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---------------- 246 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL---------------- 246 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC----------------
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC----------------
Confidence 5799999999999998888775 689999999 99999999876321 2358999999986421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~ 406 (478)
+ ..||+|++.-- + .++-. ..+++.+++.|+|||.+++.-
T Consensus 247 ---------------~-~~~D~v~~~~v-------l----~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 247 ---------------P-RKADAIILSFV-------L----LNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp ---------------S-SCEEEEEEESC-------G----GGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ---------------C-CCccEEEEccc-------c----cCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 2 24999998310 0 01222 479999999999999888643
No 237
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.10 E-value=3.3e-06 Score=88.31 Aligned_cols=102 Identities=23% Similarity=0.190 Sum_probs=75.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.+|+|.|.++..|.+. ..+|++||+++.+++.|++......-++++++.+|+.+++.+..
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~-------------- 351 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP-------------- 351 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG--------------
T ss_pred CCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh--------------
Confidence 469999999999999999876 67999999999999999987643222479999999987642200
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....+||+|++| ||..-. .++++.+.. ++|++++.+.
T Consensus 352 ------------~~~~~fD~Vv~d------------PPr~g~-~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 352 ------------WAKNGFDKVLLD------------PARAGA-AGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp ------------GGTTCCSEEEEC------------CCTTCC-HHHHHHHHH-HCCSEEEEEE
T ss_pred ------------hhcCCCCEEEEC------------CCCccH-HHHHHHHHh-cCCCeEEEEE
Confidence 024579999996 233223 367776664 7888877653
No 238
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.09 E-value=3e-06 Score=85.63 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=77.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C-----CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D-----FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~-----~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~ 336 (478)
..+||.+|+|+|.+...+.+.. . .+|+++|+|+..+++|+..+.... -+++++.+|.++..
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~~~~i~~~D~l~~~------------ 197 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR-QKMTLLHQDGLANL------------ 197 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-CCCEEEESCTTSCC------------
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-CCceEEECCCCCcc------------
Confidence 4689999999999888777764 2 799999999999999998653211 15789999976421
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCC-C----C--CCCCC-CCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDA-R----N--GTSAP-PVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~-~----~--g~s~P-p~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
...+||+|+.+..=+.. . . ....+ +.......|++.+.+.|+|||.+++-+
T Consensus 198 -------------------~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 198 -------------------LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp -------------------CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -------------------ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 34679999997420000 0 0 00000 111233479999999999999988766
No 239
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.08 E-value=1.2e-05 Score=82.15 Aligned_cols=63 Identities=17% Similarity=0.126 Sum_probs=52.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEK 326 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~ 326 (478)
..+||.+|+|.|.++..|.+. ..+|++||+++.+++.|++......-++++++.+|+.+++..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQA 276 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHH
T ss_pred CCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHH
Confidence 368999999999999988864 469999999999999999876432225799999999999865
No 240
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.08 E-value=2.2e-06 Score=88.39 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=71.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+.+. +.+|++||+++.+++.|++. +... .......+..+.+..
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~-g~~v~gvD~s~~~~~~a~~~-~~~~--~~~~~~~~~~~~l~~---------------- 167 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEA-GVRHLGFEPSSGVAAKAREK-GIRV--RTDFFEKATADDVRR---------------- 167 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHT-TCEEEEECCCHHHHHHHHTT-TCCE--ECSCCSHHHHHHHHH----------------
T ss_pred CCEEEEecCCCCHHHHHHHHc-CCcEEEECCCHHHHHHHHHc-CCCc--ceeeechhhHhhccc----------------
Confidence 569999999999999888875 67999999999999999987 3221 111122233333321
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
.+.+||+|+..- . ...+ + --..+|+.+++.|+|||++++.+.
T Consensus 168 -------------~~~~fD~I~~~~--v--l~h~---~---d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 168 -------------TEGPANVIYAAN--T--LCHI---P---YVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp -------------HHCCEEEEEEES--C--GGGC---T---THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------CCCCEEEEEECC--h--HHhc---C---CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 246799999831 1 1011 1 247899999999999999998754
No 241
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.07 E-value=1.1e-06 Score=85.31 Aligned_cols=44 Identities=5% Similarity=0.023 Sum_probs=35.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
..+||.||+|+|.++..+....-.+|+++|+++.+++.|+++..
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~ 99 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLK 99 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHH
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHh
Confidence 46899999999987765443322379999999999999999864
No 242
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.06 E-value=2.3e-06 Score=85.35 Aligned_cols=99 Identities=15% Similarity=0.063 Sum_probs=70.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|+|.++..|.+....+|++||+++.|++.|.+. ++++......-+.++.. .
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~-----~~rv~~~~~~ni~~l~~--~------------- 145 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQ-----DDRVRSMEQYNFRYAEP--V------------- 145 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHT-----CTTEEEECSCCGGGCCG--G-------------
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CcccceecccCceecch--h-------------
Confidence 469999999999999988877456999999999999996553 45665443322223211 0
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.-+...||+|++|+--. . -..+|..+++.|+|||.+++=
T Consensus 146 -----------~l~~~~fD~v~~d~sf~-----------s--l~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 146 -----------DFTEGLPSFASIDVSFI-----------S--LNLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp -----------GCTTCCCSEEEECCSSS-----------C--GGGTHHHHHHHSCTTCEEEEE
T ss_pred -----------hCCCCCCCEEEEEeeHh-----------h--HHHHHHHHHHHcCcCCEEEEE
Confidence 01234599999975210 1 166899999999999999874
No 243
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.03 E-value=9.5e-06 Score=83.17 Aligned_cols=106 Identities=16% Similarity=0.070 Sum_probs=74.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|+|.++..+..... .+|+++|+|+.+++.|++.+... .+++++++.+|+.++-
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~---------------- 281 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS---------------- 281 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG----------------
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC----------------
Confidence 46899999999999998887753 59999999999999999876322 1357999999998762
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC--ChHHHHHHHHHccCcCcEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF--VRKDVLLAARLILSDFGIFV 403 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f--~~~efl~~~~~~L~~~Gilv 403 (478)
....+||+|++|..=+... + ....+ +-.++++.+++.| .+++++
T Consensus 282 --------------~~~~~fD~Ii~npPyg~r~-~---~~~~~~~ly~~~~~~l~r~l-~g~~~~ 327 (373)
T 3tm4_A 282 --------------QYVDSVDFAISNLPYGLKI-G---KKSMIPDLYMKFFNELAKVL-EKRGVF 327 (373)
T ss_dssp --------------GTCSCEEEEEEECCCC----------CCHHHHHHHHHHHHHHHE-EEEEEE
T ss_pred --------------cccCCcCEEEECCCCCccc-C---cchhHHHHHHHHHHHHHHHc-CCeEEE
Confidence 1346799999974211100 0 00111 1267889999989 434333
No 244
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.03 E-value=1.5e-05 Score=89.12 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=76.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC--CEEEEEECChHHHHHHHHhcCC------CCCCCeEEEEchHHHHHHHHHhhhcCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD--FEVVGVEMDEVVLRVARQYFGL------EDGEFLQVSVGDAIEFLEKLARQIVGK 334 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~--~~V~~VEiDp~Vl~vA~~~Fg~------~~d~rl~v~v~Dg~~~l~~~~~~~~~~ 334 (478)
+.+||.||+|.|.++..|.+..+ .+|++||+++.+++.|++.+.. ...++++++++|+.++-
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp---------- 791 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFD---------- 791 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCC----------
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCC----------
Confidence 57999999999999999988753 6999999999999999884320 12257999999987641
Q ss_pred CCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 038592 335 NPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~ 406 (478)
.....||+|++.- . -.++.. ..+++.+++.|+|| .+++.+
T Consensus 792 --------------------~~d~sFDlVV~~e----V-------LeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 792 --------------------SRLHDVDIGTCLE----V-------IEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp --------------------TTSCSCCEEEEES----C-------GGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred --------------------cccCCeeEEEEeC----c-------hhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 1456799999931 1 122333 34899999999998 666544
No 245
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.00 E-value=4.7e-06 Score=82.98 Aligned_cols=60 Identities=25% Similarity=0.295 Sum_probs=46.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+. +.+|++||+|+.+++.|++.+.....++++++.+|+.++
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~-~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPL-AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT 102 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTT-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS
T ss_pred cCEEEEEcCcCcHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC
Confidence 469999999999999988875 579999999999999999876321225799999998754
No 246
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.98 E-value=5.1e-06 Score=84.86 Aligned_cols=95 Identities=18% Similarity=0.213 Sum_probs=70.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..|.+.. +.+++++|+ |.|++.|+++ ++++++.+|..+-
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~------------------ 258 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFDG------------------ 258 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTC------------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCCC------------------
Confidence 5799999999999998888764 789999999 9999888643 6899999997641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.+.. |+|++--- +..-+.. .-..+|+++++.|+|||.+++.
T Consensus 259 -------------~p~~--D~v~~~~v-------lh~~~~~-~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 259 -------------VPKG--DAIFIKWI-------CHDWSDE-HCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp -------------CCCC--SEEEEESC-------GGGBCHH-HHHHHHHHHHHHSCTTCEEEEE
T ss_pred -------------CCCC--CEEEEech-------hhcCCHH-HHHHHHHHHHHHcCCCCEEEEE
Confidence 1222 99988310 0000000 1247899999999999988774
No 247
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.98 E-value=3.6e-05 Score=76.67 Aligned_cols=132 Identities=16% Similarity=0.210 Sum_probs=85.0
Q ss_pred CCeEEEEeCc------hhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEE-EEchHHHHHHHHHhhhcC
Q 038592 263 RPKALCVGVG------GGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQV-SVGDAIEFLEKLARQIVG 333 (478)
Q Consensus 263 ~~~VLvIGlG------gG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v-~v~Dg~~~l~~~~~~~~~ 333 (478)
..+||.+|+| .|+ ..+.+.. +.+|++||++|. + +++++ +.+|+.+.-
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~----------v---~~v~~~i~gD~~~~~--------- 119 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF----------V---SDADSTLIGDCATVH--------- 119 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC----------B---CSSSEEEESCGGGCC---------
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC----------C---CCCEEEEECccccCC---------
Confidence 4699999994 477 3444443 479999999998 1 36788 999986531
Q ss_pred CCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCC--C--CCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 334 KNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAP--P--VEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~P--p--~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
...+||+|+.|..... .|.... . ..+ -..+++.+++.|+|||.|++-+...
T Consensus 120 ----------------------~~~~fD~Vvsn~~~~~--~g~~~~d~~~~~~l-~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 120 ----------------------TANKWDLIISDMYDPR--TKHVTKENDSKEGF-FTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp ----------------------CSSCEEEEEECCCCCC-----CCSCCCCCCTH-HHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ----------------------ccCcccEEEEcCCccc--cccccccccchHHH-HHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2357999999864221 111100 0 112 2578999999999999999977554
Q ss_pred CchHHHHHHHHHHHh-cCccEEEee-cccceEEEEEEc
Q 038592 410 NRSFYDMLIQEFRDV-FQELYEIDV-GNEENFVLIATG 445 (478)
Q Consensus 410 ~~~~~~~v~~~l~~v-F~~v~~~~v-~~~~N~Vl~a~~ 445 (478)
.. .+.+...+++. |..+..... .+....+++|..
T Consensus 175 ~~--~~~l~~~l~~~GF~~v~~~asr~~s~e~~lv~~~ 210 (290)
T 2xyq_A 175 SW--NADLYKLMGHFSWWTAFVTNVNASSSEAFLIGAN 210 (290)
T ss_dssp SC--CHHHHHHHTTEEEEEEEEEGGGTTSSCEEEEEEE
T ss_pred CC--HHHHHHHHHHcCCcEEEEEEcCCCchheEEecCC
Confidence 22 13566677777 766554422 233456677754
No 248
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.97 E-value=9.7e-06 Score=80.50 Aligned_cols=123 Identities=19% Similarity=0.107 Sum_probs=86.4
Q ss_pred CCCeEEEEeCchhHHHHHHHhhC------CCEEEEEECCh--------------------------HHHHHHHHhcCCC-
Q 038592 262 FRPKALCVGVGGGALVSFLRTQL------DFEVVGVEMDE--------------------------VVLRVARQYFGLE- 308 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~~------~~~V~~VEiDp--------------------------~Vl~vA~~~Fg~~- 308 (478)
.|.+||.+|+..|..+.+++..+ +.+|+++|..+ ..++.|+++|.-.
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 47899999999998887776542 56899999642 1466778776421
Q ss_pred -CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHH
Q 038592 309 -DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKD 387 (478)
Q Consensus 309 -~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~e 387 (478)
.+++++++.||+.+.+.+ ....+||+|++|++... ....
T Consensus 186 l~~~~I~li~Gda~etL~~----------------------------~~~~~~d~vfIDaD~y~------------~~~~ 225 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPT----------------------------APIDTLAVLRMDGDLYE------------STWD 225 (282)
T ss_dssp CCSTTEEEEESCHHHHSTT----------------------------CCCCCEEEEEECCCSHH------------HHHH
T ss_pred CCcCceEEEEeCHHHHHhh----------------------------CCCCCEEEEEEcCCccc------------cHHH
Confidence 147899999999988744 13467999999975311 2468
Q ss_pred HHHHHHHccCcCcEEEE-EeCCCCchHHHHHHHHHHHhcC
Q 038592 388 VLLAARLILSDFGIFVM-NVIPPNRSFYDMLIQEFRDVFQ 426 (478)
Q Consensus 388 fl~~~~~~L~~~Gilv~-N~~~~~~~~~~~v~~~l~~vF~ 426 (478)
+|+.+..+|++||++++ |+. -.+.. ...++.+.+..+
T Consensus 226 ~Le~~~p~L~pGGiIv~DD~~-~~~G~-~~Av~Ef~~~~~ 263 (282)
T 2wk1_A 226 TLTNLYPKVSVGGYVIVDDYM-MCPPC-KDAVDEYRAKFD 263 (282)
T ss_dssp HHHHHGGGEEEEEEEEESSCT-TCHHH-HHHHHHHHHHTT
T ss_pred HHHHHHhhcCCCEEEEEcCCC-CCHHH-HHHHHHHHHhcC
Confidence 99999999999999998 652 22332 333444444444
No 249
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.97 E-value=1.1e-05 Score=80.55 Aligned_cols=58 Identities=22% Similarity=0.256 Sum_probs=51.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+. ..+|++||+|+.+++.|++.+. ..++++++.+|+.++
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKV 108 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTS
T ss_pred cCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhC
Confidence 469999999999999999887 6799999999999999998875 346899999999875
No 250
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.96 E-value=2.8e-05 Score=76.97 Aligned_cols=122 Identities=13% Similarity=0.067 Sum_probs=76.6
Q ss_pred CCeEEEEeCch---hHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGG---GALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGg---G~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..++|.||+|. |.+...+++. ++.+|++||.||.|++.|+..+.-....+++++.+|..+.-.-+.... ...+
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~---~~~~ 155 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPE---LRDT 155 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHH---HHTT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccc---cccc
Confidence 46899999995 5555545544 578999999999999999998763333579999999987621100000 0000
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
++ .+..+++++.-+ +..-|..-.-...++.+++.|+|||.|++...+.+
T Consensus 156 ~D---------------~~~p~av~~~av--------LH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 156 LD---------------LTRPVALTVIAI--------VHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CC---------------TTSCCEEEEESC--------GGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cC---------------cCCcchHHhhhh--------HhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 11 123344444311 11011110114799999999999999999776653
No 251
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.95 E-value=2.7e-05 Score=72.25 Aligned_cols=123 Identities=17% Similarity=0.148 Sum_probs=79.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|.|.++..+ ..+|++||+++. +++++.+|+.+.
T Consensus 68 ~~~vLDiG~G~G~~~~~l----~~~v~~~D~s~~---------------~~~~~~~d~~~~------------------- 109 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSI----RNPVHCFDLASL---------------DPRVTVCDMAQV------------------- 109 (215)
T ss_dssp TSCEEEETCTTCHHHHHC----CSCEEEEESSCS---------------STTEEESCTTSC-------------------
T ss_pred CCeEEEECCcCCHHHHHh----hccEEEEeCCCC---------------CceEEEeccccC-------------------
Confidence 579999999999988765 479999999998 356777776542
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~ 422 (478)
+....+||+|++... +. .-....+++.+++.|+|||.+++............+.+.++
T Consensus 110 -----------~~~~~~fD~v~~~~~-------l~----~~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l~ 167 (215)
T 2zfu_A 110 -----------PLEDESVDVAVFCLS-------LM----GTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVT 167 (215)
T ss_dssp -----------SCCTTCEEEEEEESC-------CC----SSCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHHH
T ss_pred -----------CCCCCCEeEEEEehh-------cc----ccCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHHH
Confidence 014567999998321 11 01347899999999999999998554332112344555565
Q ss_pred Hh-cCccEEEeecccceEEEEEEcC
Q 038592 423 DV-FQELYEIDVGNEENFVLIATGL 446 (478)
Q Consensus 423 ~v-F~~v~~~~v~~~~N~Vl~a~~~ 446 (478)
+. |..+. .......-.++++.+.
T Consensus 168 ~~Gf~~~~-~~~~~~~~~~~~~~k~ 191 (215)
T 2zfu_A 168 KLGFKIVS-KDLTNSHFFLFDFQKT 191 (215)
T ss_dssp HTTEEEEE-EECCSTTCEEEEEEEC
T ss_pred HCCCEEEE-EecCCCeEEEEEEEec
Confidence 54 54333 2323333355555544
No 252
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.95 E-value=1.7e-05 Score=82.66 Aligned_cols=145 Identities=18% Similarity=0.141 Sum_probs=90.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC--CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE--DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~--~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.+|+|.|..+.++.+. +.+|++||+|+.++++|++.+... .-++++++.+|+.+++...
T Consensus 94 g~~VLDLgcG~G~~al~LA~~-g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~------------- 159 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK-ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLI------------- 159 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHH-------------
T ss_pred CCEEEEeCCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhc-------------
Confidence 469999999999999888765 579999999999999999876321 1157999999999987642
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCC-CCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNG-TSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g-~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
...+||+|++|-.-....+| +..+ + -+++.+......++.....+++-+ ++.-++ ...+
T Consensus 160 ---------------~~~~fDvV~lDPPrr~~~~grv~~l-e-d~~P~l~~~~~~l~~~~~~~~vK~-sP~ld~-~~~~- 219 (410)
T 3ll7_A 160 ---------------KTFHPDYIYVDPARRSGADKRVYAI-A-DCEPDLIPLATELLPFCSSILAKL-SPMIDL-WDTL- 219 (410)
T ss_dssp ---------------HHHCCSEEEECCEEC-----CCCCG-G-GEESCHHHHHHHHGGGSSEEEEEE-CTTSCH-HHHH-
T ss_pred ---------------cCCCceEEEECCCCcCCCCceEEeh-h-hcCCCHHHHHHHHHhhCCcEEEEc-CCCCCh-HHHH-
Confidence 12469999998532221111 1111 1 123444444444444445566655 343332 1122
Q ss_pred HHHHhcC---ccEEEeecccceEEEEEE
Q 038592 420 EFRDVFQ---ELYEIDVGNEENFVLIAT 444 (478)
Q Consensus 420 ~l~~vF~---~v~~~~v~~~~N~Vl~a~ 444 (478)
+ .++ ++..+.+.++..+.++-+
T Consensus 220 --~-~l~~~~ev~~vSv~ge~kE~~l~~ 244 (410)
T 3ll7_A 220 --Q-SLLHVQELHVVAAHGEVKELLVRM 244 (410)
T ss_dssp --H-HCSSEEEEEEEEETTEEEEEEEEE
T ss_pred --h-hCCCCcEEEEEEeCCeEEEEEEEe
Confidence 2 234 356666777788866654
No 253
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.94 E-value=2e-05 Score=77.78 Aligned_cols=55 Identities=27% Similarity=0.306 Sum_probs=50.4
Q ss_pred eEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 265 KALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 265 ~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
+||.||+|.|.++..|.+. +.+|++||+|+.+++.+++.+. +.+++++.+|+.++
T Consensus 49 ~VLEIG~G~G~lt~~L~~~-~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEA-GAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLY 103 (271)
T ss_dssp CEEEECCTTSHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGS
T ss_pred eEEEEeCchHHHHHHHHHc-CCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhC
Confidence 9999999999999999886 4799999999999999999886 36899999999876
No 254
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.93 E-value=8.5e-06 Score=82.99 Aligned_cols=92 Identities=14% Similarity=0.161 Sum_probs=71.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|+++ ++++++.+|..+-
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~------------------ 264 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL------SGIEHVGGDMFAS------------------ 264 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTC------------------
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc------CCCEEEeCCcccC------------------
Confidence 5799999999999998888875 689999999 9999988763 5699999998641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N 405 (478)
.+. ||+|++-- . + .++-+ ..+|+.+++.|+|||.+++.
T Consensus 265 -------------~~~--~D~v~~~~----~---l----h~~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 265 -------------VPQ--GDAMILKA----V---C----HNWSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp -------------CCC--EEEEEEES----S---G----GGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------------CCC--CCEEEEec----c---c----ccCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 022 99999831 0 1 01122 38999999999999988874
No 255
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.93 E-value=1.1e-05 Score=81.47 Aligned_cols=97 Identities=16% Similarity=0.166 Sum_probs=70.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCC-CCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGL-EDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~-~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+||.||+|.|.++..+.+.. +.+++++|+ +.++. ++.... ...+|++++.+|..+.
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~----------------- 244 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE----------------- 244 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC-----------------
T ss_pred CceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC-----------------
Confidence 5799999999999998888765 689999999 55555 333321 1246899999998621
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~~Gilv~N~ 406 (478)
.. .||+|++-- . + .++-+ ..+|+++++.|+|||.+++.-
T Consensus 245 ---------------~p-~~D~v~~~~----v---l----h~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 245 ---------------VP-HADVHVLKR----I---L----HNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp ---------------CC-CCSEEEEES----C---G----GGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred ---------------CC-CCcEEEEeh----h---c----cCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 12 799999821 0 1 01122 489999999999999998743
No 256
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.91 E-value=6.1e-06 Score=79.29 Aligned_cols=100 Identities=13% Similarity=0.037 Sum_probs=69.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|+|.++..|.+....+|++||+++.+++.|++. ++++.+....-+.++.. .
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~-----~~~~~~~~~~~~~~~~~--~------------- 97 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRS-----DERVVVMEQFNFRNAVL--A------------- 97 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHT-----CTTEEEECSCCGGGCCG--G-------------
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHh-----CccccccccceEEEeCH--h-------------
Confidence 469999999999999988887335999999999999998875 24444433322333210 0
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
......||.+.+|+-- ++ + ..+|..+++.|+|||.+++-+
T Consensus 98 -----------~~~~~~~d~~~~D~v~-------~~----l--~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 98 -----------DFEQGRPSFTSIDVSF-------IS----L--DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp -----------GCCSCCCSEEEECCSS-------SC----G--GGTHHHHHHHSCTTCEEEEEE
T ss_pred -----------HcCcCCCCEEEEEEEh-------hh----H--HHHHHHHHHhccCCCEEEEEE
Confidence 0122236777776521 11 1 679999999999999998853
No 257
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.90 E-value=8.2e-06 Score=83.24 Aligned_cols=95 Identities=19% Similarity=0.140 Sum_probs=70.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..|.+.. +.+++++|+ |.|++.|+++ ++++++.+|..+-
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~D~~~~------------------ 256 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF------PGVTHVGGDMFKE------------------ 256 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTC------------------
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc------CCeEEEeCCcCCC------------------
Confidence 5799999999999998888764 789999999 9999888653 6899999997641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.+.. |+|++--- +..-+.. .-..+|+++++.|+|||.+++.
T Consensus 257 -------------~p~~--D~v~~~~v-------lh~~~d~-~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 257 -------------VPSG--DTILMKWI-------LHDWSDQ-HCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp -------------CCCC--SEEEEESC-------GGGSCHH-HHHHHHHHHHHHSCTTCEEEEE
T ss_pred -------------CCCC--CEEEehHH-------hccCCHH-HHHHHHHHHHHHcCCCCEEEEE
Confidence 1222 99988210 1000100 1247899999999999988774
No 258
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.89 E-value=4.8e-05 Score=77.95 Aligned_cols=131 Identities=15% Similarity=0.122 Sum_probs=90.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhc---CCC---CCCCeEEEEchHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYF---GLE---DGEFLQVSVGDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~F---g~~---~d~rl~v~v~Dg~~~l~~~~~~~~~~~ 335 (478)
..+||.+..|-|+=+..|.+.. +..|+++|+++.-++..++.+ +.. ...++++...|+..+-..
T Consensus 149 g~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~--------- 219 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL--------- 219 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH---------
T ss_pred CCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh---------
Confidence 4589999999998777777765 358999999999887776543 332 235799999999988543
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCC-CCCC-------------ChHHHHHHHHHccCcCcE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAP-PVEF-------------VRKDVLLAARLILSDFGI 401 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~P-p~~f-------------~~~efl~~~~~~L~~~Gi 401 (478)
....||.|++|+-.+..-.|+.-+ |... ++.+.|.++.+.|+|||.
T Consensus 220 --------------------~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~ 279 (359)
T 4fzv_A 220 --------------------EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGH 279 (359)
T ss_dssp --------------------STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEE
T ss_pred --------------------ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence 456899999999765310122222 2211 356788999999999999
Q ss_pred EEEEeCCCCchHHHHHHHHHH
Q 038592 402 FVMNVIPPNRSFYDMLIQEFR 422 (478)
Q Consensus 402 lv~N~~~~~~~~~~~v~~~l~ 422 (478)
+|.-+.+-+++--+.+++.+-
T Consensus 280 LVYsTCSl~~~ENE~vV~~~L 300 (359)
T 4fzv_A 280 VVYSTCSLSHLQNEYVVQGAI 300 (359)
T ss_dssp EEEEESCCCTTTTHHHHHHHH
T ss_pred EEEEeCCCchhhCHHHHHHHH
Confidence 998776654433333444333
No 259
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.84 E-value=0.00016 Score=72.55 Aligned_cols=144 Identities=19% Similarity=0.183 Sum_probs=89.3
Q ss_pred CCeEEEEeCchhHHHH----HHHh-hCCC--EEEEEECChH---------HHHHHHHhcC-CC--CCC--CeEEEEchHH
Q 038592 263 RPKALCVGVGGGALVS----FLRT-QLDF--EVVGVEMDEV---------VLRVARQYFG-LE--DGE--FLQVSVGDAI 321 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~----~L~~-~~~~--~V~~VEiDp~---------Vl~vA~~~Fg-~~--~d~--rl~v~v~Dg~ 321 (478)
..+||.+|.|+|.-.. .+.+ .+.. +.+.+|.+|. .-++++..+. .+ .++ .++++.+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 4689999999996321 1222 2444 4455665431 2222222211 11 233 4578899999
Q ss_pred HHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcE
Q 038592 322 EFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGI 401 (478)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gi 401 (478)
+.+.++ ...++|+|++|.|++.. .+++.+.++|+.++++++|||+
T Consensus 177 ~~l~~l----------------------------~~~~~Da~flDgFsP~k-------NPeLWs~e~f~~l~~~~~pgg~ 221 (308)
T 3vyw_A 177 KRIKEV----------------------------ENFKADAVFHDAFSPYK-------NPELWTLDFLSLIKERIDEKGY 221 (308)
T ss_dssp HHGGGC----------------------------CSCCEEEEEECCSCTTT-------SGGGGSHHHHHHHHTTEEEEEE
T ss_pred HHHhhh----------------------------cccceeEEEeCCCCccc-------CcccCCHHHHHHHHHHhCCCcE
Confidence 998652 34579999999998754 2468999999999999999999
Q ss_pred EEEEeCCCCchHHHHHHHHHHHh-cCccEEEeecccceEEEEEEcCCC
Q 038592 402 FVMNVIPPNRSFYDMLIQEFRDV-FQELYEIDVGNEENFVLIATGLSI 448 (478)
Q Consensus 402 lv~N~~~~~~~~~~~v~~~l~~v-F~~v~~~~v~~~~N~Vl~a~~~~~ 448 (478)
|+. .+.... |-+.|+++ |. |...+-....-..++|+..+.
T Consensus 222 laT--Ytaag~----VRR~L~~aGF~-V~k~~G~g~KReml~A~~~~~ 262 (308)
T 3vyw_A 222 WVS--YSSSLS----VRKSLLTLGFK-VGSSREIGRKRKGTVASLKAP 262 (308)
T ss_dssp EEE--SCCCHH----HHHHHHHTTCE-EEEEECC---CEEEEEESSSC
T ss_pred EEE--EeCcHH----HHHHHHHCCCE-EEecCCCCCCCceeEEecCCC
Confidence 994 444333 34556666 53 555553333346788876543
No 260
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.82 E-value=1.8e-05 Score=79.89 Aligned_cols=93 Identities=12% Similarity=0.134 Sum_probs=71.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|+++ ++++++.+|..+-
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~------------------ 243 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS------NNLTYVGGDMFTS------------------ 243 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB------TTEEEEECCTTTC------------------
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC------CCcEEEeccccCC------------------
Confidence 5799999999999999888875 689999999 9999998763 4599999997531
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCCh---HHHHHHHHHccCc---CcEEEEEe
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVR---KDVLLAARLILSD---FGIFVMNV 406 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~---~efl~~~~~~L~~---~Gilv~N~ 406 (478)
.+ .||+|++-- . + .++-+ ..+|+.+++.|+| ||.+++.-
T Consensus 244 -------------~p--~~D~v~~~~----~---l----h~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 244 -------------IP--NADAVLLKY----I---L----HNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp -------------CC--CCSEEEEES----C---G----GGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred -------------CC--CccEEEeeh----h---h----ccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 12 399999821 0 1 01112 3899999999999 99887753
No 261
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.81 E-value=6.2e-05 Score=72.51 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=51.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+.. .+|++||+|+.+++.|++.+.. .++++++.+|+.++
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDILQF 88 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGGGC
T ss_pred CCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHHhC
Confidence 4689999999999999998774 7999999999999999998753 36899999999865
No 262
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.76 E-value=6.8e-05 Score=74.97 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=51.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.+|+|+|..+..+.+.. +.+|++||+|+.+++.|++.+.... ++++++.+|..++
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l 87 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREA 87 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGH
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHH
Confidence 4699999999999999998876 6899999999999999999875322 6899999997765
No 263
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.74 E-value=1.1e-05 Score=78.72 Aligned_cols=64 Identities=19% Similarity=0.148 Sum_probs=52.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECCh-------HHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDE-------VVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKL 327 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp-------~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~ 327 (478)
..+||.+|+|.|..+.++... +.+|++||++| ..++.|++..... -..+++++.+|+.+++...
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~-g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~ 155 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL-GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPAL 155 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT-TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHHHh-CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhh
Confidence 469999999999999988875 67999999999 8899888754221 1246999999999998653
No 264
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.69 E-value=2.2e-05 Score=82.23 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=76.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--------------CCEEEEEECChHHHHHHHHhcCCCCC--CCeEEEEchHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--------------DFEVVGVEMDEVVLRVARQYFGLEDG--EFLQVSVGDAIEFLEK 326 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--------------~~~V~~VEiDp~Vl~vA~~~Fg~~~d--~rl~v~v~Dg~~~l~~ 326 (478)
..+||..|||+|.+...+.++. ..++.++|+|+.++++|+..+-+..- .+.+++++|.+...
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~-- 249 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE-- 249 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC--
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc--
Confidence 4689999999999877766652 36899999999999999976533221 25788999986531
Q ss_pred HHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCC-CCCCCC-------CCCCCCCCCChHHHHHHHHHccCc
Q 038592 327 LARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLD-SGDARN-------GTSAPPVEFVRKDVLLAARLILSD 398 (478)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~-s~d~~~-------g~s~Pp~~f~~~efl~~~~~~L~~ 398 (478)
...+||+|+.+.. ...... .+.. |..-....|++.+.+.|+|
T Consensus 250 -----------------------------~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~-~~~~~~~~fl~~~~~~Lk~ 299 (445)
T 2okc_A 250 -----------------------------PSTLVDVILANPPFGTRPAGSVDINRPDFYV-ETKNNQLNFLQHMMLMLKT 299 (445)
T ss_dssp -----------------------------CSSCEEEEEECCCSSCCCTTCCCCCCTTSSS-CCSCHHHHHHHHHHHHEEE
T ss_pred -----------------------------ccCCcCEEEECCCCCCcccccchhhHhhcCC-CCcchHHHHHHHHHHHhcc
Confidence 2347999999631 111000 0000 1111235899999999999
Q ss_pred CcEEEEEe
Q 038592 399 FGIFVMNV 406 (478)
Q Consensus 399 ~Gilv~N~ 406 (478)
||.+++-+
T Consensus 300 gG~~a~V~ 307 (445)
T 2okc_A 300 GGRAAVVL 307 (445)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEEE
Confidence 99887655
No 265
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.68 E-value=2.9e-05 Score=84.97 Aligned_cols=124 Identities=20% Similarity=0.152 Sum_probs=82.5
Q ss_pred hhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC---C--CEEEEEECChHHHHHHHHhcCC-CCC
Q 038592 237 HVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL---D--FEVVGVEMDEVVLRVARQYFGL-EDG 310 (478)
Q Consensus 237 ~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~---~--~~V~~VEiDp~Vl~vA~~~Fg~-~~d 310 (478)
..|.+||..++.-..+.. ........||++|+|.|-|.++..+.. + ++|.+||.+| +..+|++.... .-+
T Consensus 335 ~~Ye~AI~~Al~d~~~~~---~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~ 410 (637)
T 4gqb_A 335 SQYQQAIYKCLLDRVPEE---EKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWG 410 (637)
T ss_dssp HHHHHHHHHHHHHHSCGG---GTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHhhhhc---cccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCC
Confidence 457788887654221110 111224579999999999977666542 2 4899999998 45566654321 125
Q ss_pred CCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHH
Q 038592 311 EFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLL 390 (478)
Q Consensus 311 ~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~ 390 (478)
++++|+.+|..++ ...++.|+||........ + -+. -.+.|.
T Consensus 411 dkVtVI~gd~eev-------------------------------~LPEKVDIIVSEwMG~fL---l---~E~--mlevL~ 451 (637)
T 4gqb_A 411 SQVTVVSSDMREW-------------------------------VAPEKADIIVSELLGSFA---D---NEL--SPECLD 451 (637)
T ss_dssp GGEEEEESCTTTC-------------------------------CCSSCEEEEECCCCBTTB---G---GGC--HHHHHH
T ss_pred CeEEEEeCcceec-------------------------------cCCcccCEEEEEcCcccc---c---ccC--CHHHHH
Confidence 7899999999877 145789999997654321 1 122 246788
Q ss_pred HHHHccCcCcEEE
Q 038592 391 AARLILSDFGIFV 403 (478)
Q Consensus 391 ~~~~~L~~~Gilv 403 (478)
...+.|+|||+++
T Consensus 452 Ardr~LKPgGimi 464 (637)
T 4gqb_A 452 GAQHFLKDDGVSI 464 (637)
T ss_dssp HHGGGEEEEEEEE
T ss_pred HHHHhcCCCcEEc
Confidence 8889999999875
No 266
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.66 E-value=0.00019 Score=69.79 Aligned_cols=102 Identities=12% Similarity=-0.015 Sum_probs=71.9
Q ss_pred CCCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 262 FRPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.|.+||.||+|.|-|+..+. ...+++++|||+.++++|++++... +.+.++.+.|...-
T Consensus 105 ~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~-g~~~~~~v~D~~~~------------------ 163 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREK-DWDFTFALQDVLCA------------------ 163 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHT-TCEEEEEECCTTTS------------------
T ss_pred CCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhc-CCCceEEEeecccC------------------
Confidence 47899999999999998777 6789999999999999999986432 36688888887643
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~ 407 (478)
.....||+|++=.- +.|- ++.-....+ .+...|+++|++| |+.
T Consensus 164 -------------~~~~~~DvvLllk~-------lh~L-E~q~~~~~~-~ll~aL~~~~vvV-sfP 206 (253)
T 3frh_A 164 -------------PPAEAGDLALIFKL-------LPLL-EREQAGSAM-ALLQSLNTPRMAV-SFP 206 (253)
T ss_dssp -------------CCCCBCSEEEEESC-------HHHH-HHHSTTHHH-HHHHHCBCSEEEE-EEE
T ss_pred -------------CCCCCcchHHHHHH-------HHHh-hhhchhhHH-HHHHHhcCCCEEE-EcC
Confidence 14568999977210 0000 001112233 6777999987665 565
No 267
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.64 E-value=0.0002 Score=70.94 Aligned_cols=161 Identities=12% Similarity=0.066 Sum_probs=109.7
Q ss_pred CeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCccc
Q 038592 264 PKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACS 343 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~ 343 (478)
..+|.+=.|+|+++..+.. .+.+++.||+++..++.-++.+.. +++++|+..|+.++++....
T Consensus 93 ~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~-------------- 155 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLP-------------- 155 (283)
T ss_dssp SSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCS--------------
T ss_pred CCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcC--------------
Confidence 4678888999999987766 347999999999999999999864 57899999999999987421
Q ss_pred ccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC--ChHHHHHHHHH--ccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 344 LKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF--VRKDVLLAARL--ILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 344 ~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f--~~~efl~~~~~--~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
+..+||+|++| ||-+. .-...++.+.+ .+.++|+++++..--+....+.+.+
T Consensus 156 ------------~~~~fdLVfiD------------PPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~~~~~~~~~~ 211 (283)
T 2oo3_A 156 ------------PPEKRGLIFID------------PSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVNKAWTEQFLR 211 (283)
T ss_dssp ------------CTTSCEEEEEC------------CCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESSHHHHHHHHH
T ss_pred ------------CCCCccEEEEC------------CCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccchHHHHHHHH
Confidence 34579999997 34331 22445555555 5678999999876666666777888
Q ss_pred HHHHhcCccE--EEeecccc-----eEEEEEEcCCCCCCcchhhhhhhHHHHHHh
Q 038592 420 EFRDVFQELY--EIDVGNEE-----NFVLIATGLSIVSSGSDCENAFGKKLRLLI 467 (478)
Q Consensus 420 ~l~~vF~~v~--~~~v~~~~-----N~Vl~a~~~~~~~~~~~~~~~~~~~l~~~i 467 (478)
.|++.=..+. ++.+..+. -.=++..+-|.. ..+..+...+.|.+.+
T Consensus 212 ~l~~~~~~~l~~el~~~~~~~~gm~gsGm~viNpP~~--l~~~~~~~l~~l~~~l 264 (283)
T 2oo3_A 212 KMREISSKSVRIELHLNPLINEGMTGCGLWIINPPYT--FPSEIKLVLETLTTYF 264 (283)
T ss_dssp HHHHHCSSEEEEEEECCCSSCCSCCEEEEEEESCCTT--HHHHHHHHHHHHHHHS
T ss_pred HHHhcCCCeEEEEEEecCCCCCCcCceeEEEECCchh--HHHHHHHHHHHHHHHh
Confidence 8875432433 33332111 122444455543 4445556666676644
No 268
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.62 E-value=4.8e-05 Score=74.21 Aligned_cols=58 Identities=22% Similarity=0.361 Sum_probs=51.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+. ..+|++||+|+.+++.|++.+.. .++++++.+|+.++
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~-~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTE-CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQF 87 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTT-SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTC
T ss_pred cCEEEEEcccccHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhC
Confidence 468999999999999999876 47999999999999999998763 46899999999986
No 269
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.56 E-value=2.5e-05 Score=76.49 Aligned_cols=62 Identities=21% Similarity=0.175 Sum_probs=50.3
Q ss_pred CeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC-----CC-C---CCCeEEEEchHHHHHHH
Q 038592 264 PKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG-----LE-D---GEFLQVSVGDAIEFLEK 326 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg-----~~-~---d~rl~v~v~Dg~~~l~~ 326 (478)
.+||.+|+|.|..+.++... +.+|++||++|.+.+++++.+. .. . .++++++.+|+.++++.
T Consensus 90 ~~VLDl~~G~G~dal~lA~~-g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV-GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH-TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred CEEEEcCCcCCHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 69999999999999998876 6689999999998777766542 11 1 15799999999999753
No 270
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.54 E-value=0.00017 Score=79.47 Aligned_cols=128 Identities=14% Similarity=0.021 Sum_probs=81.7
Q ss_pred hhcHHHHHHHHhhhcccccccccCCCCCeEEEEeCchhHHHHHHHhhC--------------CCEEEEEECChHHHHHHH
Q 038592 237 HVYLVPMVASCALIGSYIGERIRFGFRPKALCVGVGGGALVSFLRTQL--------------DFEVVGVEMDEVVLRVAR 302 (478)
Q Consensus 237 ~~Y~~~m~~~l~l~~~~~~~~~~~g~~~~VLvIGlGgG~L~~~L~~~~--------------~~~V~~VEiDp~Vl~vA~ 302 (478)
..|.++|...+.-.... .+..+-||+||+|.|.|.++..... ..+|.+||.+|..+...+
T Consensus 390 ~~Y~~AI~~al~d~~~~------~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~ 463 (745)
T 3ua3_A 390 DVYGEAVVGALKDLGAD------GRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLK 463 (745)
T ss_dssp HHHHHHHHHHHHHHHTT------CCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcc------cCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHH
Confidence 45777777764221100 0113579999999999986543321 249999999996654443
Q ss_pred HhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCC
Q 038592 303 QYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVE 382 (478)
Q Consensus 303 ~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~ 382 (478)
+...-.-+++++|+.+|..++---... ...++.|+||..+-... ...+
T Consensus 464 ~~~~Ng~~d~VtVI~gd~eev~lp~~~-------------------------~~~ekVDIIVSElmGsf-------l~nE 511 (745)
T 3ua3_A 464 YMNVRTWKRRVTIIESDMRSLPGIAKD-------------------------RGFEQPDIIVSELLGSF-------GDNE 511 (745)
T ss_dssp HHHHHTTTTCSEEEESCGGGHHHHHHH-------------------------TTCCCCSEEEECCCBTT-------BGGG
T ss_pred HHHhcCCCCeEEEEeCchhhccccccc-------------------------CCCCcccEEEEeccccc-------cchh
Confidence 322111246899999999998321000 12578999999664321 1122
Q ss_pred CChHHHHHHHHHccCcCcEEE
Q 038592 383 FVRKDVLLAARLILSDFGIFV 403 (478)
Q Consensus 383 f~~~efl~~~~~~L~~~Gilv 403 (478)
+.++.|..+.+.|+|+|+++
T Consensus 512 -L~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 512 -LSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp -SHHHHHHTTGGGSCTTCEEE
T ss_pred -ccHHHHHHHHHhCCCCcEEE
Confidence 45789999999999999876
No 271
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.50 E-value=0.00017 Score=77.68 Aligned_cols=114 Identities=14% Similarity=0.016 Sum_probs=76.7
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-------------------CCEEEEEECChHHHHHHHHhcCCCCCC-----CeEEEEc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-------------------DFEVVGVEMDEVVLRVARQYFGLEDGE-----FLQVSVG 318 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-------------------~~~V~~VEiDp~Vl~vA~~~Fg~~~d~-----rl~v~v~ 318 (478)
..+|+..+||+|++...+.+++ ..++.++|+|+.++++|+..+-+...+ +.+++++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 4689999999999776655542 137999999999999999765443222 3789999
Q ss_pred hHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCC-CCCCCC----CCCCCCCCCChHHHHHHHH
Q 038592 319 DAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLD-SGDARN----GTSAPPVEFVRKDVLLAAR 393 (478)
Q Consensus 319 Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~-s~d~~~----g~s~Pp~~f~~~efl~~~~ 393 (478)
|.+..-.. ...+||+|+.+.. ...... ... .|..=....|++.+.
T Consensus 250 DtL~~~~~-----------------------------~~~~fD~Vv~NPPf~~~~~~~~~~~~~-~~~~~~~~~Fl~~~l 299 (541)
T 2ar0_A 250 NTLGSDGE-----------------------------NLPKAHIVATNPPFGSAAGTNITRTFV-HPTSNKQLCFMQHII 299 (541)
T ss_dssp CTTSHHHH-----------------------------TSCCEEEEEECCCCTTCSSCCCCSCCS-SCCSCHHHHHHHHHH
T ss_pred CCcccccc-----------------------------cccCCeEEEECCCcccccchhhHhhcC-CCCCchHHHHHHHHH
Confidence 98765321 3457999999641 111000 000 011112457999999
Q ss_pred HccCcCcEEEEEe
Q 038592 394 LILSDFGIFVMNV 406 (478)
Q Consensus 394 ~~L~~~Gilv~N~ 406 (478)
+.|++||.+++=+
T Consensus 300 ~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 300 ETLHPGGRAAVVV 312 (541)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEe
Confidence 9999999887644
No 272
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.50 E-value=7.3e-05 Score=72.55 Aligned_cols=57 Identities=26% Similarity=0.306 Sum_probs=50.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+....+|++||+|+.+++.|++. + ..+++++.+|+.++
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---DERLEVINEDASKF 88 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---CTTEEEECSCTTTC
T ss_pred cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---CCCeEEEEcchhhC
Confidence 468999999999999999887458999999999999999887 3 46899999999876
No 273
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.46 E-value=0.00011 Score=74.16 Aligned_cols=95 Identities=15% Similarity=0.131 Sum_probs=70.3
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||+|.|.++..+.+.. +.+++++|+ |.+++.|+++ ++++++.+|..+-
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~------------------ 248 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN------ENLNFVGGDMFKS------------------ 248 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC------SSEEEEECCTTTC------------------
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC------CCcEEEeCccCCC------------------
Confidence 5799999999999998888875 689999999 8999888752 4599999987641
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCc---CcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSD---FGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~---~Gilv~N 405 (478)
.+ .||+|++--- +..-+.. ....+|+.+++.|+| ||.+++.
T Consensus 249 -------------~~--~~D~v~~~~v-------lh~~~d~-~~~~~l~~~~~~L~p~~~gG~l~i~ 292 (358)
T 1zg3_A 249 -------------IP--SADAVLLKWV-------LHDWNDE-QSLKILKNSKEAISHKGKDGKVIII 292 (358)
T ss_dssp -------------CC--CCSEEEEESC-------GGGSCHH-HHHHHHHHHHHHTGGGGGGCEEEEE
T ss_pred -------------CC--CceEEEEccc-------ccCCCHH-HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 12 4999998310 1000100 123899999999999 9987763
No 274
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.45 E-value=9.2e-05 Score=66.62 Aligned_cols=88 Identities=19% Similarity=0.183 Sum_probs=63.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
..+||.||+|. +.||+++.|++.|++.+. .+++++++|+.++-..
T Consensus 13 g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~----~~~~~~~~d~~~~~~~---------------- 57 (176)
T 2ld4_A 13 GQFVAVVWDKS---------------SPVEALKGLVDKLQALTG----NEGRVSVENIKQLLQS---------------- 57 (176)
T ss_dssp TSEEEEEECTT---------------SCHHHHHHHHHHHHHHTT----TTSEEEEEEGGGGGGG----------------
T ss_pred CCEEEEecCCc---------------eeeeCCHHHHHHHHHhcc----cCcEEEEechhcCccc----------------
Confidence 57999999985 239999999999999864 2489999998765210
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
+..+.+||+|+.-. ....+ ++. ...+++.+++.|+|||.|++.
T Consensus 58 -----------~~~~~~fD~V~~~~----~l~~~--~~~---~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 58 -----------AHKESSFDIILSGL----VPGST--TLH---SAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp -----------CCCSSCEEEEEECC----STTCC--CCC---CHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------cCCCCCEeEEEECC----hhhhc--ccC---HHHHHHHHHHHCCCCEEEEEE
Confidence 01356799999821 11111 111 278999999999999999984
No 275
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.44 E-value=9e-05 Score=72.89 Aligned_cols=101 Identities=13% Similarity=0.054 Sum_probs=73.9
Q ss_pred CCCeEEEEeCchhHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 262 FRPKALCVGVGGGALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.|.+||.||||.|-|+..+... +..++.++|||+.+++++++++... +.+.++.+.|-..-
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~-g~~~~~~v~D~~~~----------------- 193 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL-NVPHRTNVADLLED----------------- 193 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT-TCCEEEEECCTTTS-----------------
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc-CCCceEEEeeeccc-----------------
Confidence 3789999999999999888776 4689999999999999999997532 23467777775532
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChH----HHHHHHHHccCcCcEEEEEeCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRK----DVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~----efl~~~~~~L~~~Gilv~N~~~ 408 (478)
....+||++++-. . .+.++. ..+ .+...|+++|++| |...
T Consensus 194 --------------~p~~~~DvaL~lk--t----------i~~Le~q~kg~g~-~ll~aL~~~~vvV-Sfp~ 237 (281)
T 3lcv_B 194 --------------RLDEPADVTLLLK--T----------LPCLETQQRGSGW-EVIDIVNSPNIVV-TFPT 237 (281)
T ss_dssp --------------CCCSCCSEEEETT--C----------HHHHHHHSTTHHH-HHHHHSSCSEEEE-EEEC
T ss_pred --------------CCCCCcchHHHHH--H----------HHHhhhhhhHHHH-HHHHHhCCCCEEE-eccc
Confidence 2567899998821 0 112222 344 8999999988876 4444
No 276
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.41 E-value=0.00035 Score=72.09 Aligned_cols=112 Identities=9% Similarity=0.075 Sum_probs=74.0
Q ss_pred CCeEEEEeCchhHHHHHHHhh-CC--------------------------------------CEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-LD--------------------------------------FEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~~--------------------------------------~~V~~VEiDp~Vl~vA~~ 303 (478)
...++..+||+|+++...... .+ .+|+++|+|+.+++.|++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 468999999999988666543 12 469999999999999998
Q ss_pred hcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCC
Q 038592 304 YFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVE 382 (478)
Q Consensus 304 ~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~ 382 (478)
..... .+.+++++.+|+.++. ....||+|++|..=+.. + ...
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~-------------------------------~~~~fD~Iv~NPPYG~r---l---~~~ 317 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFK-------------------------------TNKINGVLISNPPYGER---L---LDD 317 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCC-------------------------------CCCCSCEEEECCCCTTT---T---SCH
T ss_pred HHHHcCCCCceEEEECChHHCC-------------------------------ccCCcCEEEECCchhhc---c---CCH
Confidence 75321 2357999999998762 23479999996321110 0 000
Q ss_pred CChHHHHHHHHHccCc--CcEEEEEeCCCCchH
Q 038592 383 FVRKDVLLAARLILSD--FGIFVMNVIPPNRSF 413 (478)
Q Consensus 383 f~~~efl~~~~~~L~~--~Gilv~N~~~~~~~~ 413 (478)
---..+|+.+.+.|++ ||-+.+= +.+.++
T Consensus 318 ~~l~~ly~~lg~~lk~~~g~~~~ii--t~~~~l 348 (384)
T 3ldg_A 318 KAVDILYNEMGETFAPLKTWSQFIL--TNDTDF 348 (384)
T ss_dssp HHHHHHHHHHHHHHTTCTTSEEEEE--ESCTTH
T ss_pred HHHHHHHHHHHHHHhhCCCcEEEEE--ECCHHH
Confidence 0124577777777765 7776643 334454
No 277
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.40 E-value=0.00043 Score=71.57 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=47.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C--------------------------------------CEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D--------------------------------------FEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~--------------------------------------~~V~~VEiDp~Vl~vA~~ 303 (478)
...+|..+||+|+++..+.... + .+|+++|+|+.+++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 4689999999999876655431 2 469999999999999998
Q ss_pred hcCCC-CCCCeEEEEchHHHH
Q 038592 304 YFGLE-DGEFLQVSVGDAIEF 323 (478)
Q Consensus 304 ~Fg~~-~d~rl~v~v~Dg~~~ 323 (478)
..... .+.+++++.+|+.++
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~ 302 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADF 302 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGC
T ss_pred HHHHcCCCCceEEEECChHhC
Confidence 75322 234799999999875
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.35 E-value=9.8e-05 Score=73.00 Aligned_cols=57 Identities=32% Similarity=0.497 Sum_probs=49.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC---CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD---FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~---~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+... .+|++||+|+.+++.|++.+ .++++++.+|+.++
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~ 102 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTF 102 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGC
T ss_pred cCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcC
Confidence 46899999999999999887632 34999999999999999884 46899999999886
No 279
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.34 E-value=0.00033 Score=72.25 Aligned_cols=61 Identities=23% Similarity=0.388 Sum_probs=47.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-C--------------------------------------CEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-D--------------------------------------FEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~--------------------------------------~~V~~VEiDp~Vl~vA~~ 303 (478)
..++|..|||+|+++..+.... + .+|+++|+|+.+++.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 4689999999999887665541 1 579999999999999998
Q ss_pred hcCCC-CCCCeEEEEchHHHH
Q 038592 304 YFGLE-DGEFLQVSVGDAIEF 323 (478)
Q Consensus 304 ~Fg~~-~d~rl~v~v~Dg~~~ 323 (478)
..... .+.+++++.+|+.++
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l 296 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQF 296 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGC
T ss_pred HHHHcCCCCceEEEECChhhc
Confidence 76321 134799999998875
No 280
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.33 E-value=0.00016 Score=70.41 Aligned_cols=58 Identities=21% Similarity=0.142 Sum_probs=47.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++. +.+....+|++||+|+.+++.|++.+.. .++++++.+|+.++
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid~~~~~~a~~~~~~--~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVGERLDQLTVIELDRDLAARLQTHPFL--GPKLTIYQQDAMTF 79 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHHTTCSCEEEECCCHHHHHHHHTCTTT--GGGEEEECSCGGGC
T ss_pred cCEEEEECCCCcHHHH-hhhCCCCeEEEEECCHHHHHHHHHHhcc--CCceEEEECchhhC
Confidence 4589999999999999 7653223399999999999999987753 35899999999885
No 281
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.33 E-value=0.00078 Score=66.72 Aligned_cols=76 Identities=21% Similarity=0.208 Sum_probs=61.9
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
...++..++|+|+-+.+|.+. +.+|+++|.||..++.|++ +.- +|++++.+|..++-.-+..
T Consensus 23 gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~------------- 84 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAA------------- 84 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHH-------------
T ss_pred CCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHH-------------
Confidence 358999999999999999987 7899999999999999999 642 6999999999876332221
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLD 368 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~ 368 (478)
....++|.|+.|+.
T Consensus 85 ------------~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 85 ------------LGVERVDGILADLG 98 (285)
T ss_dssp ------------TTCSCEEEEEEECS
T ss_pred ------------cCCCCcCEEEeCCc
Confidence 12357999999985
No 282
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.05 E-value=0.00085 Score=73.60 Aligned_cols=112 Identities=17% Similarity=0.128 Sum_probs=79.4
Q ss_pred CCeEEEEeCchhHHHHHHHhh-----------C--CCEEEEEEC---ChHHHHHHHHhcCC------------C------
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-----------L--DFEVVGVEM---DEVVLRVARQYFGL------------E------ 308 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-----------~--~~~V~~VEi---Dp~Vl~vA~~~Fg~------------~------ 308 (478)
..+||.+|.|+|.-.....+. . ..+++.+|. +++.+..|-.++.- +
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 468999999999733222111 1 257999999 88888755443210 0
Q ss_pred -----C--CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC
Q 038592 309 -----D--GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV 381 (478)
Q Consensus 309 -----~--d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~ 381 (478)
. .-+++++.+|+.+.+.++.. ....+||+|++|.|++.. .+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~-------------------------~~~~~~d~~~~D~f~p~~-------np 194 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDD-------------------------SLNQKVDAWFLDGFAPAK-------NP 194 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCG-------------------------GGTTCEEEEEECCSCGGG-------CG
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhccc-------------------------ccCCcccEEEECCCCCcC-------Ch
Confidence 1 24678999999999865210 024679999999998643 24
Q ss_pred CCChHHHHHHHHHccCcCcEEEEEe
Q 038592 382 EFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 382 ~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
++.+.++|..+.+++++||.+....
T Consensus 195 ~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 195 DMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp GGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred hhhhHHHHHHHHHHhCCCCEEEecc
Confidence 6899999999999999999988543
No 283
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.99 E-value=0.0016 Score=64.16 Aligned_cols=131 Identities=14% Similarity=0.077 Sum_probs=82.5
Q ss_pred CeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCC---CCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 264 PKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLE---DGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~---~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
.+||.||+|.|+++.++....+ ..+.++++.-.+ . .-... .+.++..+.+|. +..
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl-~----~~pi~~~~~g~~ii~~~~~~-dv~--------------- 134 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG-H----EKPMNVQSLGWNIITFKDKT-DIH--------------- 134 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT-C----CCCCCCCBTTGGGEEEECSC-CTT---------------
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC-c----ccccccCcCCCCeEEEeccc-eeh---------------
Confidence 4899999999999998877654 477788776332 0 00111 011233333332 100
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEEEeCCCCchHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~N~~~~~~~~~~~v~ 418 (478)
...+.+||+|+.|+--. + |... -.++.+...|+.+.+.|+|| |.|++-+..+-..-...++
T Consensus 135 --------------~l~~~~~DlVlsD~apn--s-G~~~-~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~pyg~~~~~l~ 196 (277)
T 3evf_A 135 --------------RLEPVKCDTLLCDIGES--S-SSSV-TEGERTVRVLDTVEKWLACGVDNFCVKVLAPYMPDVLEKL 196 (277)
T ss_dssp --------------TSCCCCCSEEEECCCCC--C-SCHH-HHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHHHHH
T ss_pred --------------hcCCCCccEEEecCccC--c-CchH-HHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCccHHHHH
Confidence 01456799999996322 1 2210 01122234468888999999 9999999986344467789
Q ss_pred HHHHHhcCccEEEee
Q 038592 419 QEFRDVFQELYEIDV 433 (478)
Q Consensus 419 ~~l~~vF~~v~~~~v 433 (478)
..|++.|..|...+.
T Consensus 197 ~~lk~~F~~V~~~KP 211 (277)
T 3evf_A 197 ELLQRRFGGTVIRNP 211 (277)
T ss_dssp HHHHHHHCCEEECCT
T ss_pred HHHHHhcCCEEEEeC
Confidence 999999999887764
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=96.97 E-value=0.0028 Score=70.98 Aligned_cols=116 Identities=9% Similarity=0.048 Sum_probs=74.2
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC----CEEEEEECChHHHHHH--HHhcCC---C-CCCCeEEEEchHHHHHHHHHhhhc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD----FEVVGVEMDEVVLRVA--RQYFGL---E-DGEFLQVSVGDAIEFLEKLARQIV 332 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~----~~V~~VEiDp~Vl~vA--~~~Fg~---~-~d~rl~v~v~Dg~~~l~~~~~~~~ 332 (478)
..+||..|+|+|++...+.+..+ .++.++|+|+..+++| +..... . ..+...+..+|....- .
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~-~------ 394 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN-P------ 394 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC-G------
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc-c------
Confidence 46999999999998888877652 5899999999999999 543322 1 1123456666655420 0
Q ss_pred CCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCC---------------CCCCCC-----CChHHHHHHH
Q 038592 333 GKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGT---------------SAPPVE-----FVRKDVLLAA 392 (478)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~---------------s~Pp~~-----f~~~efl~~~ 392 (478)
....+||+|+.+..=.... .. ...|.. -....|++.+
T Consensus 395 ----------------------~~~~kFDVVIgNPPYg~~~-~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~A 451 (878)
T 3s1s_A 395 ----------------------EDFANVSVVVMNPPYVSGV-TDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELV 451 (878)
T ss_dssp ----------------------GGGTTEEEEEECCBCCSSC-CCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHH
T ss_pred ----------------------cccCCCCEEEECCCccccc-cchhhhhhHHHHhhhhccccccccccccchHHHHHHHH
Confidence 1346799999964211000 00 000110 1245699999
Q ss_pred HHccCcCcEEEEEeCC
Q 038592 393 RLILSDFGIFVMNVIP 408 (478)
Q Consensus 393 ~~~L~~~Gilv~N~~~ 408 (478)
.+.|++||.+++=+..
T Consensus 452 l~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 452 TELVQDGTVISAIMPK 467 (878)
T ss_dssp HHHSCTTCEEEEEEET
T ss_pred HHhcCCCcEEEEEECh
Confidence 9999999999875543
No 285
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=96.96 E-value=0.0034 Score=67.55 Aligned_cols=117 Identities=17% Similarity=0.167 Sum_probs=79.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC----CCEEEEEECChHHHHHHHHhcCCCCC--CCeEEEEchHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL----DFEVVGVEMDEVVLRVARQYFGLEDG--EFLQVSVGDAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~----~~~V~~VEiDp~Vl~vA~~~Fg~~~d--~rl~v~v~Dg~~~l~~~~~~~~~~~~ 336 (478)
..+|+..+||+|++...+.+++ ...+.++|+|+..+++|+..+-+... ++.++..+|.+..- . +
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d----~------p 291 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDED----W------P 291 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSC----S------C
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccc----c------c
Confidence 4699999999998776666653 46999999999999999976533222 46889999977430 0 0
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCC--------------CCCCCCCCCCChHHHHHHHHHccC-cCcE
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR--------------NGTSAPPVEFVRKDVLLAARLILS-DFGI 401 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~--------------~g~s~Pp~~f~~~efl~~~~~~L~-~~Gi 401 (478)
.....+||+|+.+..=+... -|. -||..-..-.|++.+.+.|+ ++|.
T Consensus 292 -----------------~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~-~~~~s~~~~~Fl~~~l~~Lk~~gGr 353 (542)
T 3lkd_A 292 -----------------TQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGK-LAPKSKADFAFLLHGYYHLKQDNGV 353 (542)
T ss_dssp -----------------CSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSS-CCCTTCCHHHHHHHHHHTBCTTTCE
T ss_pred -----------------ccccccccEEEecCCcCCccccchhhhhhhhhhhhhh-cCCCchhhHHHHHHHHHHhCCCcee
Confidence 01356899999864211000 010 23333345579999999999 9999
Q ss_pred EEEEeC
Q 038592 402 FVMNVI 407 (478)
Q Consensus 402 lv~N~~ 407 (478)
+++=+.
T Consensus 354 ~a~VlP 359 (542)
T 3lkd_A 354 MAIVLP 359 (542)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 876443
No 286
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.96 E-value=0.00014 Score=69.61 Aligned_cols=58 Identities=17% Similarity=0.293 Sum_probs=50.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||+|.|.++..|.+. ..+|++||+|+.+++.|++.+. ..++++++.+|+.++
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~-~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKI-SKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQF 87 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHH-SSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTT
T ss_pred CCEEEEEeCCCCHHHHHHHHh-CCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhc
Confidence 458999999999999998887 4899999999999999988775 346899999998765
No 287
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.83 E-value=0.0022 Score=70.50 Aligned_cols=112 Identities=16% Similarity=0.102 Sum_probs=75.9
Q ss_pred CCeEEEEeCchhHHHHHHHhh--------C-----CCEEEEEEC---ChHHHHHHHHhcC-------------------C
Q 038592 263 RPKALCVGVGGGALVSFLRTQ--------L-----DFEVVGVEM---DEVVLRVARQYFG-------------------L 307 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~--------~-----~~~V~~VEi---Dp~Vl~vA~~~Fg-------------------~ 307 (478)
+.+|+.+|.|.|.-...+.+. + ..+++.+|. +.+.+..|-..|. +
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 568999999999733322221 1 168999999 4455544332221 0
Q ss_pred ---C-CC--CCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC
Q 038592 308 ---E-DG--EFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV 381 (478)
Q Consensus 308 ---~-~d--~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~ 381 (478)
. .+ -++++++||+.+.+.++.. ....++|+|++|.|++.. .+
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~-------------------------~~~~~~da~flD~f~p~~-------np 186 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDD-------------------------SLNNQVDAWFLDGFAPAK-------NP 186 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCG-------------------------GGTTCEEEEEECSSCC---------CC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhccc-------------------------ccCCceeEEEECCCCCCC-------Ch
Confidence 0 12 2688999999999865210 014679999999998653 23
Q ss_pred CCChHHHHHHHHHccCcCcEEEEEe
Q 038592 382 EFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 382 ~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
++.+.+||..+.+++++||.+....
T Consensus 187 ~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 187 DMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp TTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred hhhhHHHHHHHHHHhCCCCEEEecc
Confidence 5789999999999999999888543
No 288
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=96.71 E-value=0.0015 Score=70.40 Aligned_cols=115 Identities=14% Similarity=0.107 Sum_probs=74.2
Q ss_pred CeEEEEeCchhHHHHHHHhhC----------------CCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHH
Q 038592 264 PKALCVGVGGGALVSFLRTQL----------------DFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEK 326 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~----------------~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~ 326 (478)
.+||..+||+|++...+.+++ ...+.++|+|+..+++|+..+-+.. +.++.+..+|.+..-
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~-- 323 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDD-- 323 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSC--
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCc--
Confidence 489999999998765544321 3589999999999999997653321 223444667755320
Q ss_pred HHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCC-CCCCCC------------CC------CCCCCCCChHH
Q 038592 327 LARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLD-SGDARN------------GT------SAPPVEFVRKD 387 (478)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~-s~d~~~------------g~------s~Pp~~f~~~e 387 (478)
.....+||+|+.+.. +..... |. ..||..-..-.
T Consensus 324 ---------------------------~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~ 376 (544)
T 3khk_A 324 ---------------------------QHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFA 376 (544)
T ss_dssp ---------------------------SCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHH
T ss_pred ---------------------------ccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHH
Confidence 013468999999642 110000 00 02444434457
Q ss_pred HHHHHHHccCcCcEEEEEeC
Q 038592 388 VLLAARLILSDFGIFVMNVI 407 (478)
Q Consensus 388 fl~~~~~~L~~~Gilv~N~~ 407 (478)
|++.+.+.|++||.+++=+.
T Consensus 377 Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 377 WMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhccCceEEEEec
Confidence 99999999999999876553
No 289
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.55 E-value=0.0019 Score=64.17 Aligned_cols=135 Identities=13% Similarity=0.039 Sum_probs=84.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+||.||++.|+++.++.+..+ ..|++|++.......++. .. .....+.... ++.++. .
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~-~~~~~iv~~~-~~~di~-~--------------- 142 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQ-TLGWNIVKFK-DKSNVF-T--------------- 142 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CC-BTTGGGEEEE-CSCCTT-T---------------
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-cc-ccCCceEEee-cCceee-e---------------
Confidence 46899999999999999998654 488899886432100000 00 0011111111 111110 0
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEEEeCCCCchHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~N~~~~~~~~~~~v~~~ 420 (478)
....++|+|+.|+-.. .|... -.++.+...|+.+...|+|| |.|++-+..+-......++..
T Consensus 143 -------------l~~~~~DlVlsD~APn---sG~~~-~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~~~ll~~ 205 (300)
T 3eld_A 143 -------------MPTEPSDTLLCDIGES---SSNPL-VERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLER 205 (300)
T ss_dssp -------------SCCCCCSEEEECCCCC---CSSHH-HHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHHHHHHHH
T ss_pred -------------cCCCCcCEEeecCcCC---CCCHH-HHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccHHHHHHH
Confidence 1356899999997432 23210 01223344578888999999 999999988644556788999
Q ss_pred HHHhcCccEEEee
Q 038592 421 FRDVFQELYEIDV 433 (478)
Q Consensus 421 l~~vF~~v~~~~v 433 (478)
|++.|..|...+.
T Consensus 206 lk~~F~~V~~~KP 218 (300)
T 3eld_A 206 LQLRFGGGIVRVP 218 (300)
T ss_dssp HHHHHCCEEECCT
T ss_pred HHHhCCcEEEEeC
Confidence 9999999887764
No 290
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.51 E-value=0.0013 Score=64.93 Aligned_cols=134 Identities=13% Similarity=-0.003 Sum_probs=83.4
Q ss_pred CeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 264 PKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
.+||.||+|-|+++.++....+ ..|.+|++.......+... ...+.++.....+ .+. ..
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~--~~~g~~ii~~~~~-~dv-~~---------------- 151 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR--TTLGWNLIRFKDK-TDV-FN---------------- 151 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC--CBTTGGGEEEECS-CCG-GG----------------
T ss_pred CEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc--ccCCCceEEeeCC-cch-hh----------------
Confidence 4899999999999998876544 4788998865422111100 0011122222211 111 01
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC--cEEEEEeCCCCchHHHHHHHH
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF--GIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~--Gilv~N~~~~~~~~~~~v~~~ 420 (478)
....++|+|+.|+--. .|... -.+..+...|+.+.+.|+|| |.|++=+..+-..-...+++.
T Consensus 152 ------------l~~~~~DvVLSDmApn---sG~~~-~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~pyg~~~~~l~~~ 215 (282)
T 3gcz_A 152 ------------MEVIPGDTLLCDIGES---SPSIA-VEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCPYTPLIMEELSR 215 (282)
T ss_dssp ------------SCCCCCSEEEECCCCC---CSCHH-HHHHHHHHHHHHHHHHHHHHCCCEEEEEESCCCSHHHHHHHHH
T ss_pred ------------cCCCCcCEEEecCccC---CCChH-HHHHHHHHHHHHHHHHcCCCCCCcEEEEEecCCCccHHHHHHH
Confidence 1457899999997432 23210 01223334577788999999 999999988633446778999
Q ss_pred HHHhcCccEEEee
Q 038592 421 FRDVFQELYEIDV 433 (478)
Q Consensus 421 l~~vF~~v~~~~v 433 (478)
|++.|..|...+.
T Consensus 216 lk~~F~~V~~~KP 228 (282)
T 3gcz_A 216 LQLKHGGGLVRVP 228 (282)
T ss_dssp HHHHHCCEEECCT
T ss_pred HHHhcCCEEEEcC
Confidence 9999999887764
No 291
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.50 E-value=0.0025 Score=65.09 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=51.0
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
...||.||-|.|+|+..|.+.. ..+|++||+|+..+..-++.+. .++++++.+|+++|
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFE---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTT---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhcc---CCCEEEEECCccch
Confidence 3689999999999999999864 4699999999999999888762 57899999999877
No 292
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=95.82 E-value=0.027 Score=57.07 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=60.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
...++...+|+|+-+.+|.+.+ ..+|.++|.||+.++.|++ + .++|++++.++..++.+-+...
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~r-L---~~~Rv~lv~~nF~~l~~~L~~~---------- 123 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKT-I---DDPRFSIIHGPFSALGEYVAER---------- 123 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTT-C---CCTTEEEEESCGGGHHHHHHHT----------
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHh-h---cCCcEEEEeCCHHHHHHHHHhc----------
Confidence 3578889999999999998875 4799999999999999953 3 3579999999887765443221
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDS 369 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s 369 (478)
.-..++|.|+.|+--
T Consensus 124 --------------g~~~~vDgILfDLGV 138 (347)
T 3tka_A 124 --------------DLIGKIDGILLDLGV 138 (347)
T ss_dssp --------------TCTTCEEEEEEECSC
T ss_pred --------------CCCCcccEEEECCcc
Confidence 012369999999853
No 293
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.80 E-value=0.019 Score=63.54 Aligned_cols=61 Identities=23% Similarity=0.239 Sum_probs=47.4
Q ss_pred CCeEEEEeCchhHHHHHHHhh-------------------------------------------CCCEEEEEECChHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-------------------------------------------LDFEVVGVEMDEVVLR 299 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-------------------------------------------~~~~V~~VEiDp~Vl~ 299 (478)
...+|..+||+|+++..+... +..+|.++|+|+.+++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 458999999999987665542 1258999999999999
Q ss_pred HHHHhcCCC-CCCCeEEEEchHHHH
Q 038592 300 VARQYFGLE-DGEFLQVSVGDAIEF 323 (478)
Q Consensus 300 vA~~~Fg~~-~d~rl~v~v~Dg~~~ 323 (478)
.|++..... -+.++++..+|+.++
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~ 295 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQL 295 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGC
T ss_pred HHHHHHHHcCCCCceEEEECChhhC
Confidence 999875322 234689999999875
No 294
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.46 E-value=0.077 Score=51.70 Aligned_cols=125 Identities=20% Similarity=0.174 Sum_probs=81.7
Q ss_pred CCCeEEEEeCchhHHHHHHHhh--------CCCEEEEEE-----CCh-----------------------HHHHHHH--H
Q 038592 262 FRPKALCVGVGGGALVSFLRTQ--------LDFEVVGVE-----MDE-----------------------VVLRVAR--Q 303 (478)
Q Consensus 262 ~~~~VLvIGlGgG~L~~~L~~~--------~~~~V~~VE-----iDp-----------------------~Vl~vA~--~ 303 (478)
-|..++.+|+--|....++.+. .+.+|.+.| -++ .+-++.+ +
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4789999999988766664432 236888887 221 1222211 1
Q ss_pred h---cCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCC
Q 038592 304 Y---FGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPP 380 (478)
Q Consensus 304 ~---Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp 380 (478)
. ++.. +++++++.||+.+.+.+...+ .+..++|+|++|+|.-.
T Consensus 149 ~~~~~g~~-~~~i~li~G~~~dTL~~~l~~------------------------~~~~~~dlv~ID~D~Y~--------- 194 (257)
T 3tos_A 149 CSDFFGHV-TQRSVLVEGDVRETVPRYLAE------------------------NPQTVIALAYFDLDLYE--------- 194 (257)
T ss_dssp TTSTTTTS-CCSEEEEESCHHHHHHHHHHH------------------------CTTCCEEEEEECCCCHH---------
T ss_pred hhhhcCCC-CCcEEEEEecHHHHHHHHHHh------------------------CCCCceEEEEEcCcccc---------
Confidence 2 3322 478999999999998875432 14567999999986311
Q ss_pred CCCChHHHHHHHHHccCcCcEEEE-EeCCCCchHHHHHHHHHHHhcC
Q 038592 381 VEFVRKDVLLAARLILSDFGIFVM-NVIPPNRSFYDMLIQEFRDVFQ 426 (478)
Q Consensus 381 ~~f~~~efl~~~~~~L~~~Gilv~-N~~~~~~~~~~~v~~~l~~vF~ 426 (478)
-+...|+.+..+|++||++++ |...+. + ..+.+.+.+.+.
T Consensus 195 ---~t~~~le~~~p~l~~GGvIv~DD~~~~~--w-~G~~~A~~ef~~ 235 (257)
T 3tos_A 195 ---PTKAVLEAIRPYLTKGSIVAFDELDNPK--W-PGENIAMRKVLG 235 (257)
T ss_dssp ---HHHHHHHHHGGGEEEEEEEEESSTTCTT--C-THHHHHHHHHTC
T ss_pred ---hHHHHHHHHHHHhCCCcEEEEcCCCCCC--C-hHHHHHHHHHHh
Confidence 246789999999999999998 442221 1 134555666665
No 295
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.41 E-value=0.15 Score=51.10 Aligned_cols=95 Identities=17% Similarity=0.114 Sum_probs=65.8
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCE-EEEEECChHHHHHHHHhcCCCCCCCeEEEE-----chHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFE-VVGVEMDEVVLRVARQYFGLEDGEFLQVSV-----GDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~-V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v-----~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|||+|.|+ |.++..+.+..+.+ |.+++.+++-.+.|++. + +.-+...+ .|..+.+++..
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~---~~~~~~~~~~~~~~~~~~~v~~~t------- 248 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C---PEVVTHKVERLSAEESAKKIVESF------- 248 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C---TTCEEEECCSCCHHHHHHHHHHHT-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c---hhcccccccccchHHHHHHHHHHh-------
Confidence 56899999875 66777777777876 99999999999999987 4 22233322 23333343321
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ + ....++.+.+.|+++|.+++
T Consensus 249 --------------------~g~g~Dvvid~~--g--------------~~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 249 --------------------GGIEPAVALECT--G--------------VESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp --------------------SSCCCSEEEECS--C--------------CHHHHHHHHHHSCTTCEEEE
T ss_pred --------------------CCCCCCEEEECC--C--------------ChHHHHHHHHHhcCCCEEEE
Confidence 245799988621 1 14578889999999999885
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.26 E-value=0.044 Score=54.55 Aligned_cols=120 Identities=16% Similarity=0.165 Sum_probs=78.7
Q ss_pred CCeEEEEeCc------hhHHHHHHHhhC-C-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCC
Q 038592 263 RPKALCVGVG------GGALVSFLRTQL-D-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGK 334 (478)
Q Consensus 263 ~~~VLvIGlG------gG~L~~~L~~~~-~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~ 334 (478)
..+||.+|.| -|+ ..+++.. . ..|++|||.|-+. +.. ..+.+|..++
T Consensus 110 gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s-----------da~-~~IqGD~~~~----------- 164 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS-----------DAD-STLIGDCATV----------- 164 (344)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC-----------SSS-EEEESCGGGE-----------
T ss_pred CCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc-----------CCC-eEEEcccccc-----------
Confidence 4699999974 344 2444444 3 5999999988652 222 4489995432
Q ss_pred CCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCC-CCCC--CCCChHHHHHHHHHccCcCcEEEEEeCCCCc
Q 038592 335 NPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGT-SAPP--VEFVRKDVLLAARLILSDFGIFVMNVIPPNR 411 (478)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~-s~Pp--~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~ 411 (478)
....+||+||.|..... .|. ..+. ..-+-+..+.-+++.|++||-|++=+.--..
T Consensus 165 --------------------~~~~k~DLVISDMAPNt--TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 165 --------------------HTANKWDLIISDMYDPR--TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp --------------------EESSCEEEEEECCCCTT--SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred --------------------ccCCCCCEEEecCCCCc--CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 13577999999986432 243 2121 1235677888899999999999997754322
Q ss_pred hHHHHHHHHHHHhcCccEEEe
Q 038592 412 SFYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 412 ~~~~~v~~~l~~vF~~v~~~~ 432 (478)
. ..+..+++.|..+..++
T Consensus 223 ~---~~L~~lrk~F~~VK~fK 240 (344)
T 3r24_A 223 N---ADLYKLMGHFSWWTAFV 240 (344)
T ss_dssp C---HHHHHHHTTEEEEEEEE
T ss_pred H---HHHHHHHhhCCeEEEEC
Confidence 1 23555778999887775
No 297
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.06 E-value=0.051 Score=54.05 Aligned_cols=95 Identities=20% Similarity=0.320 Sum_probs=66.3
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-.+.+++ +|.. .-+.....|..+.+.+ .
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~--~~i~~~~~~~~~~~~~-~------------- 229 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-LGAE--VAVNARDTDPAAWLQK-E------------- 229 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS--EEEETTTSCHHHHHHH-H-------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCC--EEEeCCCcCHHHHHHH-h-------------
Confidence 46899999875 777777777778899999999999999977 4532 1111111345555544 1
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.+ .+|+|+..+- ..+.++.+.+.|+++|.+++-
T Consensus 230 --------------~g-~~d~vid~~g----------------~~~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 230 --------------IG-GAHGVLVTAV----------------SPKAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp --------------HS-SEEEEEESSC----------------CHHHHHHHHHHEEEEEEEEEC
T ss_pred --------------CC-CCCEEEEeCC----------------CHHHHHHHHHHhccCCEEEEe
Confidence 12 6999976321 256788899999999998853
No 298
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=94.97 E-value=0.013 Score=52.61 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=33.0
Q ss_pred CCeEEEEeCchh-HHHHHHHhhCCCEEEEEECChHHHH
Q 038592 263 RPKALCVGVGGG-ALVSFLRTQLDFEVVGVEMDEVVLR 299 (478)
Q Consensus 263 ~~~VLvIGlGgG-~L~~~L~~~~~~~V~~VEiDp~Vl~ 299 (478)
+.+||.||+|.| -.+.+|.+..+++|+++||+|.-++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~ 73 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG 73 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT
T ss_pred CCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc
Confidence 469999999999 5999999877899999999998766
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=94.96 E-value=0.063 Score=53.37 Aligned_cols=142 Identities=17% Similarity=0.161 Sum_probs=89.9
Q ss_pred CeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHH--HHhcCCCCCCCeEEEEc-hHHHHHHHHHhhhcCCCCCCC
Q 038592 264 PKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVA--RQYFGLEDGEFLQVSVG-DAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA--~~~Fg~~~d~rl~v~v~-Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
.+||.||++.|+...++....+ .+|.+||+-..=-+.- .+-++ -+-++++.+ |.. ++
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~---w~lV~~~~~~Dv~-~l--------------- 156 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYG---WNIVTMKSGVDVF-YR--------------- 156 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTT---GGGEEEECSCCTT-SS---------------
T ss_pred CEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcC---CcceEEEeccCHh-hC---------------
Confidence 4999999999999998887766 4799999865411000 00011 012444444 432 21
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC---ChHHHHHHHHHccCcC-cEEEEEeCCCCchHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF---VRKDVLLAARLILSDF-GIFVMNVIPPNRSFYD 415 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f---~~~efl~~~~~~L~~~-Gilv~N~~~~~~~~~~ 415 (478)
...++|+|++|+-.+.+ .+.. -+-..|+.+.+.|+++ |-|++=+.++-..-..
T Consensus 157 ----------------~~~~~D~ivcDigeSs~-------~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~~~v~ 213 (321)
T 3lkz_A 157 ----------------PSECCDTLLCDIGESSS-------SAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYMPKVI 213 (321)
T ss_dssp ----------------CCCCCSEEEECCCCCCS-------CHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTSHHHH
T ss_pred ----------------CCCCCCEEEEECccCCC-------ChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCChHHH
Confidence 33669999999964332 2221 2234778888999988 9999999888444455
Q ss_pred HHHHHHHHhcCccEEEe--ecccceEEEEEEcCC
Q 038592 416 MLIQEFRDVFQELYEID--VGNEENFVLIATGLS 447 (478)
Q Consensus 416 ~v~~~l~~vF~~v~~~~--v~~~~N~Vl~a~~~~ 447 (478)
..++.|+..|..+.... ..+.-.++++.+...
T Consensus 214 e~l~~lq~~fgg~lvr~P~SRnst~EmY~vsGa~ 247 (321)
T 3lkz_A 214 EKMELLQRRYGGGLVRNPLSRNSTHEMYWVSRAS 247 (321)
T ss_dssp HHHHHHHHHHCCEEECCTTSCTTCCCEEEETTCC
T ss_pred HHHHHHHHHhCCEeEeCCCCCCCcceEEEEecCC
Confidence 67899999999765443 234445666665443
No 300
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.77 E-value=0.34 Score=48.46 Aligned_cols=95 Identities=21% Similarity=0.256 Sum_probs=63.7
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEch---HHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGD---AIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~D---g~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-.+.|++ +|.. .++..+ .-++.+++...
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-----~vi~~~~~~~~~~~~~i~~~------- 238 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGAD-----LVLQISKESPQEIARKVEGQ------- 238 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCS-----EEEECSSCCHHHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCC-----EEEcCcccccchHHHHHHHH-------
Confidence 46999999875 6677677777787 99999999999999986 4532 222222 23343332211
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | ....++.+.+.|+++|.+++
T Consensus 239 ------------------~~~g~D~vid~~-------g---------~~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 239 ------------------LGCKPEVTIECT-------G---------AEASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp ------------------HTSCCSEEEECS-------C---------CHHHHHHHHHHSCTTCEEEE
T ss_pred ------------------hCCCCCEEEECC-------C---------ChHHHHHHHHHhcCCCEEEE
Confidence 124699988621 1 14567888899999999885
No 301
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.74 E-value=0.082 Score=53.22 Aligned_cols=92 Identities=17% Similarity=0.263 Sum_probs=63.6
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEE---chHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSV---GDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v---~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|+++ |.. .++. .|..+-+++.
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~-----~vi~~~~~~~~~~~~~~---------- 254 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GAT-----HVINSKTQDPVAAIKEI---------- 254 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-TCS-----EEEETTTSCHHHHHHHH----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-CCC-----EEecCCccCHHHHHHHh----------
Confidence 46999999875 6666667666676 799999999999999765 531 1221 2444444442
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ + ..+.++.+.+.|+++|.+++
T Consensus 255 ------------------~~gg~D~vid~~--g--------------~~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 255 ------------------TDGGVNFALEST--G--------------SPEILKQGVDALGILGKIAV 287 (371)
T ss_dssp ------------------TTSCEEEEEECS--C--------------CHHHHHHHHHTEEEEEEEEE
T ss_pred ------------------cCCCCcEEEECC--C--------------CHHHHHHHHHHHhcCCEEEE
Confidence 222799987521 1 14578889999999999875
No 302
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=94.68 E-value=0.042 Score=53.63 Aligned_cols=128 Identities=15% Similarity=0.054 Sum_probs=79.6
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCC-CCe---EEEEc-hHHHHHHHHHhhhcCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDG-EFL---QVSVG-DAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d-~rl---~v~v~-Dg~~~l~~~~~~~~~~~~ 336 (478)
..+|+.+|++-|+++.+..+..++ .|.+..+-... . -...... +.+ ++..+ |..+.
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~----~~P~~~~~~Gv~~i~~~~G~Df~~~------------- 135 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H----EEPMLMQSYGWNIVTMKSGVDVFYK------------- 135 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S----CCCCCCCSTTGGGEEEECSCCGGGS-------------
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c----cCCCcccCCCceEEEeeccCCccCC-------------
Confidence 459999999999999999886433 43444333221 0 0011100 223 44435 76641
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCc-EEEEEeCCCCchHHH
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFG-IFVMNVIPPNRSFYD 415 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~G-ilv~N~~~~~~~~~~ 415 (478)
...++|+|+.|+-.. +|... -.+.-+...|..+.+.|+||| -|++=+......-+.
T Consensus 136 -------------------~~~~~DvVLSDMAPn---SG~~~-vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg~~~~~~ 192 (269)
T 2px2_A 136 -------------------PSEISDTLLCDIGES---SPSAE-IEEQRTLRILEMVSDWLSRGPKEFCIKILCPYMPKVI 192 (269)
T ss_dssp -------------------CCCCCSEEEECCCCC---CSCHH-HHHHHHHHHHHHHHHHHTTCCSEEEEEESCTTSHHHH
T ss_pred -------------------CCCCCCEEEeCCCCC---CCccH-HHHHHHHHHHHHHHHHhhcCCcEEEEEECCCCchHHH
Confidence 356799999997542 12210 011112236777889999999 999988876445566
Q ss_pred HHHHHHHHhcCccEEE
Q 038592 416 MLIQEFRDVFQELYEI 431 (478)
Q Consensus 416 ~v~~~l~~vF~~v~~~ 431 (478)
..++.|++.|..+...
T Consensus 193 ~~l~~lk~~F~~vkvk 208 (269)
T 2px2_A 193 EKLESLQRRFGGGLVR 208 (269)
T ss_dssp HHHHHHHHHHCCEEEC
T ss_pred HHHHHHHHHcCCEEEE
Confidence 7789999999987743
No 303
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=94.47 E-value=0.19 Score=49.91 Aligned_cols=103 Identities=21% Similarity=0.253 Sum_probs=65.9
Q ss_pred CeEEEEeCc--hhHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH-HHHHHHhhhcCCCCCCC
Q 038592 264 PKALCVGVG--GGALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE-FLEKLARQIVGKNPDSF 339 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~-~l~~~~~~~~~~~~~~~ 339 (478)
.+|.|||+| |++++..|.+.- ..+|.++|.+++-++.+++. |... + ...|..+ .
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-G~~~----~-~~~~~~~~~---------------- 91 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-GIID----E-GTTSIAKVE---------------- 91 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-TSCS----E-EESCTTGGG----------------
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-CCcc----h-hcCCHHHHh----------------
Confidence 689999999 677888887652 23999999999998888764 3210 0 1122211 1
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
-...|+||+-+ |+. ...++++.+...|+++.+ ++++.+-.....+.+.+
T Consensus 92 -----------------~~~aDvVilav-----------p~~--~~~~vl~~l~~~l~~~~i-v~d~~Svk~~~~~~~~~ 140 (314)
T 3ggo_A 92 -----------------DFSPDFVMLSS-----------PVR--TFREIAKKLSYILSEDAT-VTDQGSVKGKLVYDLEN 140 (314)
T ss_dssp -----------------GGCCSEEEECS-----------CGG--GHHHHHHHHHHHSCTTCE-EEECCSCCTHHHHHHHH
T ss_pred -----------------hccCCEEEEeC-----------CHH--HHHHHHHHHhhccCCCcE-EEECCCCcHHHHHHHHH
Confidence 12479999932 232 346788999999988665 45665554443343333
No 304
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.44 E-value=0.23 Score=49.19 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=65.9
Q ss_pred CCeEEEEeCchh-HHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGG-ALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG-~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|.|++ .++..+.+. .+.+|.+++.+++-++.|++. |. +.-+...-.|..+.+.+..
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~-Ga--~~~i~~~~~~~~~~v~~~t------------ 228 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI-GA--DVTINSGDVNPVDEIKKIT------------ 228 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT-TC--SEEEEC-CCCHHHHHHHHT------------
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc-CC--eEEEeCCCCCHHHHhhhhc------------
Confidence 468999999864 344344443 478999999999999999875 32 2222333356666666531
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEe
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
....+|+++.+.- ..+.+..+.+.|+++|.+++--
T Consensus 229 ---------------~g~g~d~~~~~~~----------------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 229 ---------------GGLGVQSAIVCAV----------------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp ---------------TSSCEEEEEECCS----------------CHHHHHHHHHTEEEEEEEEECC
T ss_pred ---------------CCCCceEEEEecc----------------CcchhheeheeecCCceEEEEe
Confidence 2445888887531 2567888889999999987643
No 305
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.42 E-value=0.077 Score=54.10 Aligned_cols=107 Identities=10% Similarity=0.057 Sum_probs=65.5
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchH-HHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDA-IEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg-~~~l~~~~~~~~~~~~~~~ 339 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|++ +|. + .+.....|. .+.+++..
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa--~-~i~~~~~~~~~~~~~~~~----------- 250 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-AGF--E-TIDLRNSAPLRDQIDQIL----------- 250 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-TTC--E-EEETTSSSCHHHHHHHHH-----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCC--c-EEcCCCcchHHHHHHHHh-----------
Confidence 46999999876 7777677776677 99999999999999976 453 1 111111233 44454421
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCC--CCChHHHHHHHHHccCcCcEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPV--EFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~--~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+.... . +. ++. +.-....++.+.+.|+++|.+++
T Consensus 251 ----------------~g~g~Dvvid~~g~~~-~-~~--~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 251 ----------------GKPEVDCGVDAVGFEA-H-GL--GDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp ----------------SSSCEEEEEECSCTTC-B-CS--GGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred ----------------CCCCCCEEEECCCCcc-c-cc--cccccccccHHHHHHHHHHHhcCCEEEE
Confidence 2346999875321110 0 00 000 00123468888999999998874
No 306
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=94.41 E-value=0.089 Score=50.83 Aligned_cols=141 Identities=15% Similarity=0.201 Sum_probs=93.4
Q ss_pred CeEEEEeCchhHHHHHHHhhCC-CEEEEEECChHHHHHH--HHhcCCCCCCCeEEEEc-hHHHHHHHHHhhhcCCCCCCC
Q 038592 264 PKALCVGVGGGALVSFLRTQLD-FEVVGVEMDEVVLRVA--RQYFGLEDGEFLQVSVG-DAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~-~~V~~VEiDp~Vl~vA--~~~Fg~~~d~rl~v~v~-Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
.+|+.||++.|+...++....+ .+|.+||+-+.=-+.- .+-+| -+-++++.+ |-. ++
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~g---wn~v~fk~gvDv~-~~--------------- 140 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYG---WNIVKLMSGKDVF-YL--------------- 140 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTT---TTSEEEECSCCGG-GC---------------
T ss_pred CEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcC---cCceEEEecccee-ec---------------
Confidence 4899999999999998888765 4899999865422100 00011 255777777 652 11
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC---ChHHHHHHHHHccCcCcEEEEEeCCCCchHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF---VRKDVLLAARLILSDFGIFVMNVIPPNRSFYDM 416 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f---~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~ 416 (478)
...++|.|++|+--+. |.+.. -+-..|+.+.+.|++ |-|++=+.++.......
T Consensus 141 ----------------~~~~~DtllcDIgeSs-------~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~p~v~e 196 (267)
T 3p8z_A 141 ----------------PPEKCDTLLCDIGESS-------PSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYMPTVIE 196 (267)
T ss_dssp ----------------CCCCCSEEEECCCCCC-------SCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCSHHHHH
T ss_pred ----------------CCccccEEEEecCCCC-------CChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCChhHHH
Confidence 3467999999985432 22221 223477888899998 89999888885544446
Q ss_pred HHHHHHHhcCccEEEe--ecccceEEEEEEcCC
Q 038592 417 LIQEFRDVFQELYEID--VGNEENFVLIATGLS 447 (478)
Q Consensus 417 v~~~l~~vF~~v~~~~--v~~~~N~Vl~a~~~~ 447 (478)
.++.|+..|..+.... ..+.-.++.+.+...
T Consensus 197 ~l~~lq~~fgg~lVR~P~SRnsThEMY~Vsg~~ 229 (267)
T 3p8z_A 197 HLERLQRKHGGMLVRNPLSRNSTHEMYWISNGT 229 (267)
T ss_dssp HHHHHHHHHCCEEECCTTSCTTCCCEEEESSCC
T ss_pred HHHHHHHHhCCEeEeCCCCCCCcceEEEEecCC
Confidence 7899999999765443 234455666665544
No 307
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.30 E-value=0.18 Score=43.54 Aligned_cols=52 Identities=29% Similarity=0.378 Sum_probs=40.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE 322 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~ 322 (478)
..+|+|+|+| |..++..|.+ .+.+|+++|.|++.++.+++. | +.++.+|+.+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~~~-g------~~~i~gd~~~ 60 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELRER-G------VRAVLGNAAN 60 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHHHT-T------CEEEESCTTS
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHc-C------CCEEECCCCC
Confidence 4689999998 3446666665 368999999999999988762 3 5788888754
No 308
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=94.27 E-value=0.14 Score=52.46 Aligned_cols=53 Identities=17% Similarity=0.121 Sum_probs=41.5
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
..+||.||.+-|+.+..|.+. +.+|++||+-|.--.+ ..+++++++.+|+..+
T Consensus 212 G~~vlDLGAaPGGWT~~l~~r-g~~V~aVD~~~l~~~l-------~~~~~V~~~~~d~~~~ 264 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKR-NMWVYSVDNGPMAQSL-------MDTGQVTWLREDGFKF 264 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHT-TCEEEEECSSCCCHHH-------HTTTCEEEECSCTTTC
T ss_pred CCEEEEeCcCCCHHHHHHHHC-CCEEEEEEhhhcChhh-------ccCCCeEEEeCccccc
Confidence 569999999999999998876 7899999965421111 1357899999999876
No 309
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.19 E-value=0.28 Score=48.93 Aligned_cols=100 Identities=15% Similarity=0.174 Sum_probs=65.5
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh----------cCCCCC--------CCeEEEEchHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY----------FGLEDG--------EFLQVSVGDAIE 322 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~----------Fg~~~d--------~rl~v~v~Dg~~ 322 (478)
..+|.+||+| |++++..+.+. +.+|+++|.+++.++.++++ .|+..+ .++++. .|..+
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 4689999999 56677666654 67999999999999888654 232211 122221 22211
Q ss_pred HHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcE
Q 038592 323 FLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGI 401 (478)
Q Consensus 323 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gi 401 (478)
. -..-|+||.-+ |+.. ...+++..+...++++-+
T Consensus 84 a---------------------------------v~~aDlVieav------------pe~~~~k~~v~~~l~~~~~~~~I 118 (319)
T 2dpo_A 84 A---------------------------------VEGVVHIQECV------------PENLDLKRKIFAQLDSIVDDRVV 118 (319)
T ss_dssp H---------------------------------TTTEEEEEECC------------CSCHHHHHHHHHHHHTTCCSSSE
T ss_pred H---------------------------------HhcCCEEEEec------------cCCHHHHHHHHHHHHhhCCCCeE
Confidence 1 23479999933 3332 456788999999999888
Q ss_pred EEEEeCCC
Q 038592 402 FVMNVIPP 409 (478)
Q Consensus 402 lv~N~~~~ 409 (478)
++.|..+.
T Consensus 119 i~s~tS~i 126 (319)
T 2dpo_A 119 LSSSSSCL 126 (319)
T ss_dssp EEECCSSC
T ss_pred EEEeCCCh
Confidence 88777654
No 310
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.14 E-value=0.11 Score=51.83 Aligned_cols=96 Identities=17% Similarity=0.231 Sum_probs=64.7
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|+++ |.. .-+.....|..+.+.+..
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~--~vi~~~~~~~~~~v~~~t------------ 231 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY-GAT--DIINYKNGDIVEQILKAT------------ 231 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH-TCC--EEECGGGSCHHHHHHHHT------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh-CCc--eEEcCCCcCHHHHHHHHc------------
Confidence 56899999875 6677777777777 899999999999999875 532 101111134455554421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.+..+|+||- .- +. .+.++.+.+.|+++|.+++
T Consensus 232 ---------------~g~g~D~v~d-~~-g~--------------~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 232 ---------------DGKGVDKVVI-AG-GD--------------VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp ---------------TTCCEEEEEE-CS-SC--------------TTHHHHHHHHEEEEEEEEE
T ss_pred ---------------CCCCCCEEEE-CC-CC--------------hHHHHHHHHHHhcCCEEEE
Confidence 2446999975 21 10 2367888899999999874
No 311
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.11 E-value=0.14 Score=46.49 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=57.7
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|++ .|.....+....+.+|.+++.+++-.+.+++ +|. +..+.+...|..+.+.+..
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~--~~~~d~~~~~~~~~~~~~~------------ 103 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGV--EYVGDSRSVDFADEILELT------------ 103 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCC--SEEEETTCSTHHHHHHHHT------------
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC--CEEeeCCcHHHHHHHHHHh------------
Confidence 4689999953 3444433333447899999999999888866 343 1111111123344443321
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+++.-+ | .+.++.+.+.|+++|.+++
T Consensus 104 ---------------~~~~~D~vi~~~-------g----------~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 104 ---------------DGYGVDVVLNSL-------A----------GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp ---------------TTCCEEEEEECC-------C----------THHHHHHHHTEEEEEEEEE
T ss_pred ---------------CCCCCeEEEECC-------c----------hHHHHHHHHHhccCCEEEE
Confidence 234699998521 1 1367888899999998774
No 312
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.09 E-value=0.28 Score=48.72 Aligned_cols=93 Identities=17% Similarity=0.284 Sum_probs=63.1
Q ss_pred CCeEEEEeCch-hHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchH-HHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDA-IEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg-~~~l~~~~~~~~~~~~~~ 338 (478)
..+|||+|+|+ |.++..+.+.. +.+|.+++.+++-.+.+++ +|.. .++..+- .++++++.
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lGa~-----~vi~~~~~~~~~~~~~---------- 234 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LGAD-----YVSEMKDAESLINKLT---------- 234 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HTCS-----EEECHHHHHHHHHHHH----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hCCC-----EEeccccchHHHHHhh----------
Confidence 46999999874 66666666666 8899999999999999987 4531 2222111 23444421
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | ..+.++.+.+.|+++|.+++
T Consensus 235 -----------------~g~g~D~vid~~-------g---------~~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 235 -----------------DGLGASIAIDLV-------G---------TEETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp -----------------TTCCEEEEEESS-------C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred -----------------cCCCccEEEECC-------C---------ChHHHHHHHHHhhcCCEEEE
Confidence 234699998621 1 13478888999999998875
No 313
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=93.57 E-value=0.17 Score=48.68 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=42.6
Q ss_pred CeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC--------
Q 038592 312 FLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-------- 383 (478)
Q Consensus 312 rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-------- 383 (478)
..+++.+|++++++.+ .+.++|+|++|.-=. . +.. --..+
T Consensus 4 ~~~l~~gD~~~~l~~l----------------------------~~~~vdlI~~DPPY~--~-~~~-~~d~~~~~~~y~~ 51 (260)
T 1g60_A 4 INKIHQMNCFDFLDQV----------------------------ENKSVQLAVIDPPYN--L-SKA-DWDSFDSHNEFLA 51 (260)
T ss_dssp SSSEEECCHHHHHHHS----------------------------CTTCEEEEEECCCCS--S-CSS-GGGCCSSHHHHHH
T ss_pred cCeEEechHHHHHHhc----------------------------cccccCEEEECCCCC--C-Ccc-cccccCCHHHHHH
Confidence 3468999999999763 456899999974211 0 000 00011
Q ss_pred ChHHHHHHHHHccCcCcEEEEEe
Q 038592 384 VRKDVLLAARLILSDFGIFVMNV 406 (478)
Q Consensus 384 ~~~efl~~~~~~L~~~Gilv~N~ 406 (478)
.-..++..++++|+++|.++++.
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEEEEc
Confidence 23567788899999999999876
No 314
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.56 E-value=0.34 Score=48.23 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=63.0
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE---chHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV---GDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v---~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-.+.+++ +|.. ..+-. .|..+-+.+....
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~~~~~~~~~~~~~~i~~~~~~-------- 235 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGAD----VTLVVDPAKEEESSIIERIRS-------- 235 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS----EEEECCTTTSCHHHHHHHHHH--------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCC----EEEcCcccccHHHHHHHHhcc--------
Confidence 46999999874 666666666778889999999999999986 4532 11111 2334444332100
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.....+|+||--+ + ....++.+.+.|+++|.+++
T Consensus 236 ----------------~~g~g~D~vid~~--g--------------~~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 236 ----------------AIGDLPNVTIDCS--G--------------NEKCITIGINITRTGGTLML 269 (352)
T ss_dssp ----------------HSSSCCSEEEECS--C--------------CHHHHHHHHHHSCTTCEEEE
T ss_pred ----------------ccCCCCCEEEECC--C--------------CHHHHHHHHHHHhcCCEEEE
Confidence 0024699987621 1 13467888899999999875
No 315
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.53 E-value=0.79 Score=46.43 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=70.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|.+||+| |..++..|.+. +.+|.+++.+++.++.+.+. |.. ...|..+.++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~~~~~~l~~~-g~~-------~~~s~~e~~~~-------------- 78 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNVNAVQALERE-GIA-------GARSIEEFCAK-------------- 78 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT-TCB-------CCSSHHHHHHH--------------
T ss_pred CCEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHC-CCE-------EeCCHHHHHhc--------------
Confidence 3689999999 45566666654 68999999999988776543 221 12345555443
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
....|+||+-+ |.. ...+.+..+...|+++- ++++..+........+.+.
T Consensus 79 ----------------a~~~DvVi~~v------------p~~-~v~~vl~~l~~~l~~g~-iiId~st~~~~~~~~~~~~ 128 (358)
T 4e21_A 79 ----------------LVKPRVVWLMV------------PAA-VVDSMLQRMTPLLAAND-IVIDGGNSHYQDDIRRADQ 128 (358)
T ss_dssp ----------------SCSSCEEEECS------------CGG-GHHHHHHHHGGGCCTTC-EEEECSSCCHHHHHHHHHH
T ss_pred ----------------CCCCCEEEEeC------------CHH-HHHHHHHHHHhhCCCCC-EEEeCCCCChHHHHHHHHH
Confidence 23479999933 333 55778888888888754 5557766654444445555
Q ss_pred HHH
Q 038592 421 FRD 423 (478)
Q Consensus 421 l~~ 423 (478)
+++
T Consensus 129 l~~ 131 (358)
T 4e21_A 129 MRA 131 (358)
T ss_dssp HHT
T ss_pred HHH
Confidence 544
No 316
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.52 E-value=0.53 Score=47.17 Aligned_cols=93 Identities=17% Similarity=0.072 Sum_probs=63.7
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE---chHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV---GDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v---~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-++.|+++ |.. .++. .|..+.+++..
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~-----~vi~~~~~~~~~~v~~~~---------- 253 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL-GAD-----HGINRLEEDWVERVYALT---------- 253 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TCS-----EEEETTTSCHHHHHHHHH----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc-CCC-----EEEcCCcccHHHHHHHHh----------
Confidence 46999999775 6666667777788999999999999999774 531 1222 24445554432
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
.+..+|+||--+. . +.++.+.+.|+++|.+++-
T Consensus 254 -----------------~g~g~D~vid~~g--~---------------~~~~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 254 -----------------GDRGADHILEIAG--G---------------AGLGQSLKAVAPDGRISVI 286 (363)
T ss_dssp -----------------TTCCEEEEEEETT--S---------------SCHHHHHHHEEEEEEEEEE
T ss_pred -----------------CCCCceEEEECCC--h---------------HHHHHHHHHhhcCCEEEEE
Confidence 3446998876321 0 1356677899999988853
No 317
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=93.40 E-value=0.19 Score=51.68 Aligned_cols=26 Identities=15% Similarity=0.082 Sum_probs=21.8
Q ss_pred HHHHHHHHccCcCcEEEEEeCCCCch
Q 038592 387 DVLLAARLILSDFGIFVMNVIPPNRS 412 (478)
Q Consensus 387 efl~~~~~~L~~~Gilv~N~~~~~~~ 412 (478)
.||+..++.|+|||.+++.+.++...
T Consensus 206 ~FL~~Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 206 TFLRIHSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHHHHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHhccCCeEEEEEecCCCc
Confidence 35888899999999999999887443
No 318
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.39 E-value=0.88 Score=45.60 Aligned_cols=92 Identities=16% Similarity=0.157 Sum_probs=63.0
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEE-----chHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSV-----GDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v-----~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-.+.|++ +|.. .++. .|..+.+++.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-----~vi~~~~~~~~~~~~i~~~-------- 257 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGAT-----ECLNPKDYDKPIYEVICEK-------- 257 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCS-----EEECGGGCSSCHHHHHHHH--------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCc-----EEEecccccchHHHHHHHH--------
Confidence 46999999764 6666666666676 89999999999999976 4542 1221 2344445442
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVM 404 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~ 404 (478)
....+|+||--+ | ..+.++.+.+.|+++ |.+++
T Consensus 258 --------------------t~gg~Dvvid~~-------g---------~~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 258 --------------------TNGGVDYAVECA-------G---------RIETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp --------------------TTSCBSEEEECS-------C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred --------------------hCCCCCEEEECC-------C---------CHHHHHHHHHHHhcCCCEEEE
Confidence 223799988511 1 145788899999999 98875
No 319
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.37 E-value=0.88 Score=45.60 Aligned_cols=92 Identities=16% Similarity=0.216 Sum_probs=63.1
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEE-E----chHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVS-V----GDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~-v----~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|++ +|.. .++ . .|..+.+++..
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~-----~vi~~~~~~~~~~~~~~~~~------- 259 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGAT-----DFVNPNDHSEPISQVLSKMT------- 259 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCC-----EEECGGGCSSCHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCc-----eEEeccccchhHHHHHHHHh-------
Confidence 46899999764 6666667777777 89999999999999986 4542 111 1 23444454421
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVM 404 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~ 404 (478)
...+|+||--+ | ..+.++.+.+.|+++ |.+++
T Consensus 260 ---------------------~~g~D~vid~~-------g---------~~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 260 ---------------------NGGVDFSLECV-------G---------NVGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp ---------------------TSCBSEEEECS-------C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred ---------------------CCCCCEEEECC-------C---------CHHHHHHHHHHhhcCCcEEEE
Confidence 23699988511 1 145788899999999 98875
No 320
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.35 E-value=0.2 Score=50.05 Aligned_cols=71 Identities=23% Similarity=0.193 Sum_probs=46.6
Q ss_pred CCCeEEE-EchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC--ChH
Q 038592 310 GEFLQVS-VGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF--VRK 386 (478)
Q Consensus 310 d~rl~v~-v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f--~~~ 386 (478)
+...+++ .+|++++++.+ .+.++|+|++|.-=....+.... ...+ .-.
T Consensus 36 ~~~~~l~i~gD~l~~L~~l----------------------------~~~svDlI~tDPPY~~~~d~~~~-~~~~~~~~~ 86 (319)
T 1eg2_A 36 GTTRHVYDVCDCLDTLAKL----------------------------PDDSVQLIICDPPYNIMLADWDD-HMDYIGWAK 86 (319)
T ss_dssp CCEEEEEEECCHHHHHHTS----------------------------CTTCEEEEEECCCSBCCGGGGGT-CSSHHHHHH
T ss_pred cccceEEECCcHHHHHHhC----------------------------ccCCcCEEEECCCCCCCCCCccC-HHHHHHHHH
Confidence 4567888 99999998652 45689999997421100000000 1122 235
Q ss_pred HHHHHHHHccCcCcEEEEEeCCC
Q 038592 387 DVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 387 efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
+.|..++++|+|+|.++++...+
T Consensus 87 ~~l~~~~rvLk~~G~i~i~~~~~ 109 (319)
T 1eg2_A 87 RWLAEAERVLSPTGSIAIFGGLQ 109 (319)
T ss_dssp HHHHHHHHHEEEEEEEEEEECSC
T ss_pred HHHHHHHHHcCCCeEEEEEcCcc
Confidence 67788899999999999987655
No 321
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.28 E-value=1.1 Score=44.86 Aligned_cols=92 Identities=20% Similarity=0.315 Sum_probs=62.9
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEE-E----chHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVS-V----GDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~-v----~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|++ +|.. .++ . .|..+.+++.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~-----~vi~~~~~~~~~~~~~~~~-------- 257 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGAT-----ECVNPQDYKKPIQEVLTEM-------- 257 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCS-----EEECGGGCSSCHHHHHHHH--------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCc-----eEecccccchhHHHHHHHH--------
Confidence 46999999774 6666667777777 89999999999999976 4542 122 1 2344445442
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVM 404 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~ 404 (478)
....+|+||--+ + ..+.++.+.+.|+++ |.+++
T Consensus 258 --------------------~~~g~D~vid~~--g--------------~~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 258 --------------------SNGGVDFSFEVI--G--------------RLDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp --------------------TTSCBSEEEECS--C--------------CHHHHHHHHHHBCTTTCEEEE
T ss_pred --------------------hCCCCcEEEECC--C--------------CHHHHHHHHHHhhcCCcEEEE
Confidence 223699987511 1 145788889999999 98875
No 322
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.24 E-value=0.34 Score=48.85 Aligned_cols=95 Identities=22% Similarity=0.297 Sum_probs=64.2
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEE--EchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVS--VGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~--v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|++ +|.. .-+... ..|..+.+++.
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-lGa~--~vi~~~~~~~~~~~~i~~~----------- 259 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-FGVN--EFVNPKDHDKPIQEVIVDL----------- 259 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-TTCC--EEECGGGCSSCHHHHHHHH-----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCc--EEEccccCchhHHHHHHHh-----------
Confidence 46899999864 6666666666676 89999999999999976 4542 100000 13445555553
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~ 404 (478)
....+|+||--+ + ..+.++.+.+.|+++ |.+++
T Consensus 260 -----------------~~gg~D~vid~~--g--------------~~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 260 -----------------TDGGVDYSFECI--G--------------NVSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp -----------------TTSCBSEEEECS--C--------------CHHHHHHHHHTBCTTTCEEEE
T ss_pred -----------------cCCCCCEEEECC--C--------------CHHHHHHHHHHhhccCCEEEE
Confidence 223799988621 1 146788899999996 98875
No 323
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.21 E-value=1 Score=45.09 Aligned_cols=92 Identities=21% Similarity=0.269 Sum_probs=62.6
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEE-E----chHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVS-V----GDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~-v----~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-.+.|+++ |.. .++ . .|..+.+++.
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~-----~vi~~~~~~~~~~~~v~~~-------- 256 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GAT-----ECINPQDFSKPIQEVLIEM-------- 256 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-TCS-----EEECGGGCSSCHHHHHHHH--------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-CCc-----eEeccccccccHHHHHHHH--------
Confidence 46899999764 5666666666677 899999999999999864 542 121 1 2344445442
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVM 404 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~ 404 (478)
....+|+||--+ | ..+.++.+.+.|+++ |.+++
T Consensus 257 --------------------~~~g~D~vid~~-------g---------~~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 257 --------------------TDGGVDYSFECI-------G---------NVKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp --------------------TTSCBSEEEECS-------C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred --------------------hCCCCCEEEECC-------C---------cHHHHHHHHHhhccCCcEEEE
Confidence 223699987511 1 145788899999999 98875
No 324
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.18 E-value=0.36 Score=48.71 Aligned_cols=44 Identities=27% Similarity=0.361 Sum_probs=36.1
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-++.|++ +|.
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa 239 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGA 239 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC
Confidence 46999999875 666767777778899999999999999987 563
No 325
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.16 E-value=0.42 Score=47.36 Aligned_cols=95 Identities=20% Similarity=0.311 Sum_probs=64.7
Q ss_pred CCeEEEEeCch-hHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|.|+ |.++..+.+.. +.+|.+++.+++-.+.|+++ |.. .-+. ...|..+.+++..
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l-Ga~--~~i~-~~~~~~~~v~~~t------------ 235 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV-GAD--AAVK-SGAGAADAIRELT------------ 235 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT-TCS--EEEE-CSTTHHHHHHHHH------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-CCC--EEEc-CCCcHHHHHHHHh------------
Confidence 56899999875 66666677666 68999999999999999874 532 1111 1123444444432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ + ..+.++.+.+.|+++|.+++
T Consensus 236 ---------------~g~g~d~v~d~~--G--------------~~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 236 ---------------GGQGATAVFDFV--G--------------AQSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp ---------------GGGCEEEEEESS--C--------------CHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------CCCCCeEEEECC--C--------------CHHHHHHHHHHHhcCCEEEE
Confidence 234699887621 1 14578899999999999885
No 326
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.15 E-value=0.35 Score=49.03 Aligned_cols=107 Identities=15% Similarity=0.121 Sum_probs=65.2
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEch-HHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGD-AIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~D-g~~~l~~~~~~~~~~~~~~~ 339 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|++ +|. + .+.....| ..+.+++..
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~-lGa--~-~i~~~~~~~~~~~v~~~t----------- 250 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-QGF--E-IADLSLDTPLHEQIAALL----------- 250 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTC--E-EEETTSSSCHHHHHHHHH-----------
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH-cCC--c-EEccCCcchHHHHHHHHh-----------
Confidence 46999999875 7777777777777 89999999999999976 453 1 11111112 344454421
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCC---CCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR---NGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~---~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+-..... .++ ..--....++.+.+.|+++|.+++
T Consensus 251 ----------------~g~g~Dvvid~~G~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 251 ----------------GEPEVDCAVDAVGFEARGHGHEGA----KHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp ----------------SSSCEEEEEECCCTTCBCSSTTGG----GSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred ----------------CCCCCCEEEECCCCcccccccccc----cccchHHHHHHHHHHHhcCCEEEE
Confidence 234699987532211000 000 000113478888999999999875
No 327
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.15 E-value=0.88 Score=47.49 Aligned_cols=39 Identities=15% Similarity=0.191 Sum_probs=30.4
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
.+|.|||+| |..++..|.+. +.+|+++|+|++.++..++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL-GANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHc
Confidence 489999999 44455555543 6799999999999887766
No 328
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.14 E-value=0.26 Score=48.72 Aligned_cols=95 Identities=21% Similarity=0.304 Sum_probs=62.6
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|+ |.|.++..+.+..+.+|.+++.+++-++.+++ +|.. .-+.....|..+.+.+..
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~--~~~~~~~~~~~~~~~~~~------------ 213 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAE--YLINASKEDILRQVLKFT------------ 213 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS--EEEETTTSCHHHHHHHHT------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCc--EEEeCCCchHHHHHHHHh------------
Confidence 568999994 34666666666678899999999999999987 4531 111111134555554421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+|+--+ | .+.++.+.+.|+++|.++.
T Consensus 214 ---------------~~~g~D~vid~~-------g----------~~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 214 ---------------NGKGVDASFDSV-------G----------KDTFEISLAALKRKGVFVS 245 (334)
T ss_dssp ---------------TTSCEEEEEECC-------G----------GGGHHHHHHHEEEEEEEEE
T ss_pred ---------------CCCCceEEEECC-------C----------hHHHHHHHHHhccCCEEEE
Confidence 245699987622 1 1256778889999998875
No 329
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.00 E-value=0.19 Score=50.78 Aligned_cols=98 Identities=19% Similarity=0.199 Sum_probs=64.6
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-.+.|+++ |... -+.....|..+.+.+..
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-Ga~~--vi~~~~~~~~~~i~~~~------------ 247 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-GATA--TVDPSAGDVVEAIAGPV------------ 247 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-TCSE--EECTTSSCHHHHHHSTT------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-CCCE--EECCCCcCHHHHHHhhh------------
Confidence 46999999875 6677777777787 999999999999999874 5421 00001134444443200
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
......+|+||--+ + ..+.++.+.+.|+++|.+++
T Consensus 248 -------------~~~~gg~Dvvid~~--G--------------~~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 248 -------------GLVPGGVDVVIECA--G--------------VAETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp -------------SSSTTCEEEEEECS--C--------------CHHHHHHHHHHEEEEEEEEE
T ss_pred -------------hccCCCCCEEEECC--C--------------CHHHHHHHHHHhccCCEEEE
Confidence 00223799988521 1 14578889999999999885
No 330
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.98 E-value=0.54 Score=45.56 Aligned_cols=41 Identities=17% Similarity=0.300 Sum_probs=32.2
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.++|.|||+| |..++..+... +.+|+++|.+++.++.+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHH
Confidence 3689999998 44566655543 78999999999999888765
No 331
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.93 E-value=1.1 Score=44.98 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=63.4
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEE-----chHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSV-----GDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v-----~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-.+.|++ +|.. .++. .|..+.+++..
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-----~vi~~~~~~~~~~~~v~~~~------- 262 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGAT-----DCLNPRELDKPVQDVITELT------- 262 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCS-----EEECGGGCSSCHHHHHHHHH-------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCc-----EEEccccccchHHHHHHHHh-------
Confidence 46999999764 6666667777777 89999999999999976 4542 1111 23445554421
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcC-cEEEE
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDF-GIFVM 404 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~-Gilv~ 404 (478)
...+|+||--+ | ..+.++.+.+.|+++ |.+++
T Consensus 263 ---------------------~~g~Dvvid~~-------G---------~~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 263 ---------------------AGGVDYSLDCA-------G---------TAQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp ---------------------TSCBSEEEESS-------C---------CHHHHHHHHHTBCTTTCEEEE
T ss_pred ---------------------CCCccEEEECC-------C---------CHHHHHHHHHHhhcCCCEEEE
Confidence 23699987511 1 145788899999999 98875
No 332
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.85 E-value=0.12 Score=51.56 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=46.5
Q ss_pred CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCC--CCCC--Ch
Q 038592 310 GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAP--PVEF--VR 385 (478)
Q Consensus 310 d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~P--p~~f--~~ 385 (478)
..+.+++.+|++++++.+ .+.++|+|++|..=.....+-... ..++ .-
T Consensus 12 ~~~~~ii~gD~~~~l~~l----------------------------~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l 63 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESF----------------------------PEESISLVMTSPPFALQRKKEYGNLEQHEYVDWF 63 (323)
T ss_dssp CSSEEEEESCHHHHGGGS----------------------------CSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHH
T ss_pred cCCceEEeCcHHHHHhhC----------------------------CCCCeeEEEECCCCCCCcccccCCcCHHHHHHHH
Confidence 467899999999987542 456799999974211100000000 0001 13
Q ss_pred HHHHHHHHHccCcCcEEEEEeCCC
Q 038592 386 KDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 386 ~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
.+.+..++++|+|+|.+++++...
T Consensus 64 ~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 64 LSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHCcCCcEEEEEECCE
Confidence 567888999999999999988765
No 333
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.76 E-value=1.7 Score=36.26 Aligned_cols=51 Identities=20% Similarity=0.275 Sum_probs=34.6
Q ss_pred CeEEEEeCch--hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHH
Q 038592 264 PKALCVGVGG--GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAI 321 (478)
Q Consensus 264 ~~VLvIGlGg--G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~ 321 (478)
.+|+|+|+|. ..++..|.+. +.+|+++|.+++-++..++.++ +.++.+|..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~~~~~~~~~~~~------~~~~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDKDICKKASAEID------ALVINGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCS------SEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHhcC------cEEEEcCCC
Confidence 5899999872 2344555443 6799999999998876665443 345666653
No 334
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.59 E-value=0.52 Score=44.55 Aligned_cols=93 Identities=16% Similarity=0.333 Sum_probs=59.4
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCC----EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDF----EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~----~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
.+|.+||+| |+.++..|.+. +. +|.+++.+++-++...+.+|. + ...|..+.+++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~~~~~~~~~~~~g~------~-~~~~~~e~~~~----------- 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLNTANLKNASEKYGL------T-TTTDNNEVAKN----------- 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSCHHHHHHHHHHHCC------E-ECSCHHHHHHH-----------
T ss_pred CeEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCCHHHHHHHHHHhCC------E-EeCChHHHHHh-----------
Confidence 489999999 55677777664 33 899999999988877665553 2 23344444432
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
.|+||+-+ ||. .-.+.++.+...|+++-+++....+-.
T Consensus 64 ----------------------aDvVilav-----------~~~--~~~~v~~~l~~~l~~~~~vvs~~~gi~ 101 (247)
T 3gt0_A 64 ----------------------ADILILSI-----------KPD--LYASIINEIKEIIKNDAIIVTIAAGKS 101 (247)
T ss_dssp ----------------------CSEEEECS-----------CTT--THHHHC---CCSSCTTCEEEECSCCSC
T ss_pred ----------------------CCEEEEEe-----------CHH--HHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence 69999943 222 246677788888888777664444443
No 335
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.53 E-value=0.32 Score=47.96 Aligned_cols=95 Identities=15% Similarity=0.171 Sum_probs=63.2
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|++ .|.++..+.+..+.+|.+++.+++-++.+.+-+|.. .-+.....|..+.+.+.
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~------------- 214 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD--GAIDYKNEDLAAGLKRE------------- 214 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS--EEEETTTSCHHHHHHHH-------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC--EEEECCCHHHHHHHHHh-------------
Confidence 5689999983 466666666667889999999999999985556642 11111113444444442
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | .+.+..+.+.|+++|.+++
T Consensus 215 ---------------~~~~~d~vi~~~-------g----------~~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 215 ---------------CPKGIDVFFDNV-------G----------GEILDTVLTRIAFKARIVL 246 (336)
T ss_dssp ---------------CTTCEEEEEESS-------C----------HHHHHHHHTTEEEEEEEEE
T ss_pred ---------------cCCCceEEEECC-------C----------cchHHHHHHHHhhCCEEEE
Confidence 234699887621 1 2468888899999998875
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.38 E-value=0.29 Score=48.56 Aligned_cols=94 Identities=20% Similarity=0.299 Sum_probs=61.4
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
..+|||+|+|+ |.++..+.+..+.+|.+++.+++-++.+++ +|.. .-+.....|..+.+.+.
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~--~~~d~~~~~~~~~~~~~-------------- 227 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGAD--LVVNPLKEDAAKFMKEK-------------- 227 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCS--EEECTTTSCHHHHHHHH--------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCC--EEecCCCccHHHHHHHH--------------
Confidence 46999999864 555656666668899999999999999976 5542 00000012333444331
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
. ..+|+||--+ | ..+.++.+.+.|+++|.+++
T Consensus 228 --------------~-~~~d~vid~~-------g---------~~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 228 --------------V-GGVHAAVVTA-------V---------SKPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp --------------H-SSEEEEEESS-------C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred --------------h-CCCCEEEECC-------C---------CHHHHHHHHHHhhcCCEEEE
Confidence 2 3599987621 1 13567888899999998874
No 337
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.28 E-value=2.4 Score=44.51 Aligned_cols=41 Identities=24% Similarity=0.473 Sum_probs=32.7
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhC-CCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQL-DFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~ 303 (478)
..+|.|||+| |+.++..|.+.- +.+|+++|+|++.++..++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~ 52 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS 52 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC
Confidence 3589999999 556777777663 6899999999998887654
No 338
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.24 E-value=1.8 Score=45.54 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=31.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|.|||+| |+.++..|.+. +.+|+++|+|++.++..++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~~~v~~l~~~ 50 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQAKIDILNNG 50 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT
T ss_pred CceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHCC
Confidence 4699999999 44456555543 67999999999999887664
No 339
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.24 E-value=0.31 Score=48.48 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=63.1
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|+|+ |.++..+.+..+. +|.+++.+++-++.++++ |.. .-+.....|..+.+.+..
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~-Ga~--~~~~~~~~~~~~~v~~~~------------ 232 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV-GAD--YVINPFEEDVVKEVMDIT------------ 232 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH-TCS--EEECTTTSCHHHHHHHHT------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-CCC--EEECCCCcCHHHHHHHHc------------
Confidence 46899999864 5666666666777 999999999999999864 532 000000124444454421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | ..+.++.+.+.|+++|.++.
T Consensus 233 ---------------~g~g~D~vid~~-------g---------~~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 233 ---------------DGNGVDVFLEFS-------G---------APKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp ---------------TTSCEEEEEECS-------C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------CCCCCCEEEECC-------C---------CHHHHHHHHHHHhcCCEEEE
Confidence 234699997621 1 14578888999999998774
No 340
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.22 E-value=1.3 Score=44.69 Aligned_cols=44 Identities=20% Similarity=0.240 Sum_probs=33.3
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|+|.|+ |..+..+....+.+|++++.+++-++.+++.++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~ 211 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG 211 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC
Confidence 57999999974 333444444567799999999999988887664
No 341
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=92.14 E-value=0.32 Score=47.93 Aligned_cols=95 Identities=20% Similarity=0.191 Sum_probs=61.9
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|+ |.|.++..+.+..+.+|.+++.+++-++.++++ |.. .-+.....|..+.+.+..
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-Ga~--~~~~~~~~~~~~~~~~~~------------ 205 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKAL-GAW--ETIDYSHEDVAKRVLELT------------ 205 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCS--EEEETTTSCHHHHHHHHT------------
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCC--EEEeCCCccHHHHHHHHh------------
Confidence 568999994 346666666666688999999999999999874 531 111111234445554421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | .+.+..+.+.|+++|.+++
T Consensus 206 ---------------~~~g~Dvvid~~-------g----------~~~~~~~~~~l~~~G~iv~ 237 (325)
T 3jyn_A 206 ---------------DGKKCPVVYDGV-------G----------QDTWLTSLDSVAPRGLVVS 237 (325)
T ss_dssp ---------------TTCCEEEEEESS-------C----------GGGHHHHHTTEEEEEEEEE
T ss_pred ---------------CCCCceEEEECC-------C----------hHHHHHHHHHhcCCCEEEE
Confidence 235799887621 1 1256778889999998885
No 342
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.09 E-value=0.62 Score=45.21 Aligned_cols=41 Identities=10% Similarity=0.162 Sum_probs=32.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|.+||+| |+.++..|.+. +.+|++++.+++-++...+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~~~~~~~~~~ 45 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAA 45 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHT
T ss_pred CCEEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHC
Confidence 4689999999 55677766654 67999999999988876653
No 343
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.08 E-value=0.44 Score=48.53 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=34.9
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.|+++
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 46899999864 6666667777787 999999999999999875
No 344
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.97 E-value=1.7 Score=44.08 Aligned_cols=45 Identities=16% Similarity=0.180 Sum_probs=34.2
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
+.+|+|+|+|+ |.....+...++.+|+++|.++.-++.+++.+|.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~ 213 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG 213 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC
Confidence 67999999973 4333333444678999999999999988887764
No 345
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.96 E-value=0.32 Score=48.38 Aligned_cols=94 Identities=14% Similarity=0.181 Sum_probs=62.4
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|+ |.|.++..+.+..+.+|.+++.+++-.+.+++. |.. .-+... .|..+.+.+..
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~--~v~~~~-~~~~~~v~~~~------------ 223 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSV-GAD--IVLPLE-EGWAKAVREAT------------ 223 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-TCS--EEEESS-TTHHHHHHHHT------------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCc--EEecCc-hhHHHHHHHHh------------
Confidence 568999997 346677677777788999999999999999874 531 111111 34444444421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ + .+.+..+.+.|+++|.+++
T Consensus 224 ---------------~~~g~Dvvid~~--g---------------~~~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 224 ---------------GGAGVDMVVDPI--G---------------GPAFDDAVRTLASEGRLLV 255 (342)
T ss_dssp ---------------TTSCEEEEEESC--C-----------------CHHHHHHTEEEEEEEEE
T ss_pred ---------------CCCCceEEEECC--c---------------hhHHHHHHHhhcCCCEEEE
Confidence 234699987622 1 0136678889999998874
No 346
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.87 E-value=0.68 Score=45.12 Aligned_cols=40 Identities=20% Similarity=0.315 Sum_probs=31.2
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
..+|.|||+| |+.++..|.+. +.+|+++|.+++.++.+++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~~~~~~~~~ 56 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTEDILAKSKK 56 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHH
Confidence 4689999999 44566666654 6799999999999887654
No 347
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.85 E-value=0.65 Score=39.54 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=37.9
Q ss_pred CCeEEEEeCch--hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH
Q 038592 263 RPKALCVGVGG--GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE 322 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~ 322 (478)
..+|+|+|+|. ..++..|.+. +.+|+++|.|++.++.+++. ...++.+|+.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~ 59 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSKEKIELLEDE-------GFDAVIADPTD 59 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHT-------TCEEEECCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHC-------CCcEEECCCCC
Confidence 46899999973 3355555543 67999999999998887653 25677888754
No 348
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.80 E-value=0.35 Score=47.96 Aligned_cols=42 Identities=19% Similarity=0.252 Sum_probs=33.7
Q ss_pred CCeEEEEeCch--hHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVGG--GALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|||+|+|+ |.++..+.+..+.+|.+++.+++-++.++++
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l 188 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRL 188 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhC
Confidence 46999999874 5566556666688999999999999999874
No 349
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.65 E-value=0.7 Score=48.36 Aligned_cols=100 Identities=16% Similarity=0.196 Sum_probs=63.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC-----------CCC----CCCeEEEEchHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG-----------LED----GEFLQVSVGDAIEFLE 325 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg-----------~~~----d~rl~v~v~Dg~~~l~ 325 (478)
..+|.|||+| |+.++..+.+. +.+|+++|++++.++.++++.. +.. ....++ ..|. +
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~-~--- 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV-GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST-K--- 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCG-G---
T ss_pred CCEEEEECcCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCH-H---
Confidence 3579999999 44566655543 6799999999999888765421 000 001111 2221 1
Q ss_pred HHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEE
Q 038592 326 KLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~ 404 (478)
.-...|+||.-+ |+.+ +..++++.+...++++-+++.
T Consensus 111 ------------------------------~~~~aDlVIeaV------------pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 ------------------------------ELSTVDLVVEAV------------FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp ------------------------------GGTTCSEEEECC------------CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ------------------------------HHCCCCEEEEcC------------CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 112468999843 3332 346788889999999988888
Q ss_pred EeCCCC
Q 038592 405 NVIPPN 410 (478)
Q Consensus 405 N~~~~~ 410 (478)
|..+..
T Consensus 149 nTs~~~ 154 (463)
T 1zcj_A 149 NTSALN 154 (463)
T ss_dssp CCSSSC
T ss_pred CCCCcC
Confidence 776653
No 350
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.65 E-value=0.32 Score=50.31 Aligned_cols=56 Identities=25% Similarity=0.433 Sum_probs=42.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH--HHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE--FLEK 326 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~--~l~~ 326 (478)
..+|+|+|+| |-.+++.|... +..|++||.||+.++.++++ | +.++.+|+.+ .|++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~~~v~~~~~~-g------~~vi~GDat~~~~L~~ 63 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDPDHIETLRKF-G------MKVFYGDATRMDLLES 63 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEECCHHHHHHHHHT-T------CCCEESCTTCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHhC-C------CeEEEcCCCCHHHHHh
Confidence 4589999998 34466666653 68999999999999998763 3 4688999866 4544
No 351
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.52 E-value=0.86 Score=46.05 Aligned_cols=114 Identities=13% Similarity=0.066 Sum_probs=67.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh------cC-CCCCCCeEEEEchHHHHHHHHHhhhcC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY------FG-LEDGEFLQVSVGDAIEFLEKLARQIVG 333 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~------Fg-~~~d~rl~v~v~Dg~~~l~~~~~~~~~ 333 (478)
+.+|.|||+| |++++..|.+. +.+|+.++.+++.++..++. ++ ..-.+++++ ..|..+.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea~--------- 97 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARK-GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKASL--------- 97 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHHH---------
T ss_pred CCeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHHH---------
Confidence 4689999999 45566666543 56899999999988766653 21 111233433 24443332
Q ss_pred CCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCC-CCch
Q 038592 334 KNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIP-PNRS 412 (478)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~-~~~~ 412 (478)
...|+||+-+ |.. .-.++++.++..|+++-+++ ++.. -...
T Consensus 98 ------------------------~~aDvVilaV------------p~~-~~~~vl~~i~~~l~~~~ivv-s~~kGi~~~ 139 (356)
T 3k96_A 98 ------------------------EGVTDILIVV------------PSF-AFHEVITRMKPLIDAKTRIA-WGTKGLAKG 139 (356)
T ss_dssp ------------------------TTCCEEEECC------------CHH-HHHHHHHHHGGGCCTTCEEE-ECCCSCBTT
T ss_pred ------------------------hcCCEEEECC------------CHH-HHHHHHHHHHHhcCCCCEEE-EEeCCCCcC
Confidence 2369999932 222 45778888988998876554 3322 2222
Q ss_pred HHHHHHHHHHHhcC
Q 038592 413 FYDMLIQEFRDVFQ 426 (478)
Q Consensus 413 ~~~~v~~~l~~vF~ 426 (478)
. +.+-+.+.+.++
T Consensus 140 t-~~~se~i~~~l~ 152 (356)
T 3k96_A 140 S-RLLHEVVATELG 152 (356)
T ss_dssp T-BCHHHHHHHHHC
T ss_pred c-cCHHHHHHHHcC
Confidence 1 233445566666
No 352
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.45 E-value=0.15 Score=50.14 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=42.9
Q ss_pred CCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCC--------
Q 038592 311 EFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVE-------- 382 (478)
Q Consensus 311 ~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~-------- 382 (478)
.+.+++++|.+++++.+ .+++||+|+.|.-=..... ....+..
T Consensus 20 ~~~~i~~gD~~~~l~~l----------------------------~~~s~DlIvtdPPY~~~~~-y~~~~~~~~~~~~~~ 70 (297)
T 2zig_A 20 GVHRLHVGDAREVLASF----------------------------PEASVHLVVTSPPYWTLKR-YEDTPGQLGHIEDYE 70 (297)
T ss_dssp -CEEEEESCHHHHHTTS----------------------------CTTCEEEEEECCCCCCCC--------CCHHHHHHH
T ss_pred cCCEEEECcHHHHHhhC----------------------------CCCceeEEEECCCCCCccc-cCCChhhhcccccHH
Confidence 46799999999987541 4568999999742110000 0000111
Q ss_pred -CCh--HHHHHHHHHccCcCcEEEEEeCC
Q 038592 383 -FVR--KDVLLAARLILSDFGIFVMNVIP 408 (478)
Q Consensus 383 -f~~--~efl~~~~~~L~~~Gilv~N~~~ 408 (478)
++. ..++..++++|+|+|.+++++..
T Consensus 71 ~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 71 AFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 111 34667899999999999998763
No 353
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.43 E-value=1.1 Score=43.21 Aligned_cols=105 Identities=12% Similarity=0.028 Sum_probs=66.0
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.+|.+||+| |..++..|.+. +.+|++++.+++-++...+. + ++ ...|..+.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-g------~~-~~~~~~~~~~~--------------- 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSPEKAEELAAL-G------AE-RAATPCEVVES--------------- 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHT-T------CE-ECSSHHHHHHH---------------
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC-C------Ce-ecCCHHHHHhc---------------
Confidence 489999999 45566666654 67999999999888776654 2 21 23344444432
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH---HHHHHccCcCcEEEEEeCCCCchHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL---LAARLILSDFGIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl---~~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 418 (478)
.|+||+-+ |..-...+.+ +.+...|+++- +++++.+......+.+.
T Consensus 58 ------------------aDvvi~~v------------p~~~~~~~v~~~~~~l~~~l~~~~-~vi~~st~~~~~~~~~~ 106 (287)
T 3pef_A 58 ------------------CPVTFAML------------ADPAAAEEVCFGKHGVLEGIGEGR-GYVDMSTVDPATSQRIG 106 (287)
T ss_dssp ------------------CSEEEECC------------SSHHHHHHHHHSTTCHHHHCCTTC-EEEECSCCCHHHHHHHH
T ss_pred ------------------CCEEEEEc------------CCHHHHHHHHcCcchHhhcCCCCC-EEEeCCCCCHHHHHHHH
Confidence 58999833 2111234455 66677787755 55677665555555555
Q ss_pred HHHHH
Q 038592 419 QEFRD 423 (478)
Q Consensus 419 ~~l~~ 423 (478)
+.+.+
T Consensus 107 ~~~~~ 111 (287)
T 3pef_A 107 VAVVA 111 (287)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55555
No 354
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.40 E-value=0.54 Score=47.42 Aligned_cols=100 Identities=20% Similarity=0.273 Sum_probs=68.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|.+||+| ||+++..|.+. +.+|.++|.+++.++.|++. |. . ...|..+.+++..
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~~~~~~a~~~-G~------~-~~~~~~e~~~~a~------------ 66 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSRSGAKSAVDE-GF------D-VSADLEATLQRAA------------ 66 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHT-TC------C-EESCHHHHHHHHH------------
T ss_pred CCEEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CC------e-eeCCHHHHHHhcc------------
Confidence 4689999999 77888888765 67999999999999988764 43 1 2356555554421
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYD 415 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~ 415 (478)
...|+||+-+ |+ . ...+.++.+... ++ |.+++++.+-.....+
T Consensus 67 -----------------~~aDlVilav-----------P~-~-~~~~vl~~l~~~-~~-~~iv~Dv~Svk~~i~~ 109 (341)
T 3ktd_A 67 -----------------AEDALIVLAV-----------PM-T-AIDSLLDAVHTH-AP-NNGFTDVVSVKTAVYD 109 (341)
T ss_dssp -----------------HTTCEEEECS-----------CH-H-HHHHHHHHHHHH-CT-TCCEEECCSCSHHHHH
T ss_pred -----------------cCCCEEEEeC-----------CH-H-HHHHHHHHHHcc-CC-CCEEEEcCCCChHHHH
Confidence 1369999932 32 2 346777877775 55 5677888776554433
No 355
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.15 E-value=1 Score=40.16 Aligned_cols=52 Identities=29% Similarity=0.413 Sum_probs=36.9
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAI 321 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~ 321 (478)
..+|+|+|+| |..++..|.+..+.+|+++|.|++-++.+++. | ..++.+|+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~-g------~~~~~gd~~ 92 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE-G------RNVISGDAT 92 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT-T------CCEEECCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC-C------CCEEEcCCC
Confidence 3589999998 33456666543267899999999988887653 3 356677764
No 356
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.10 E-value=0.45 Score=46.75 Aligned_cols=93 Identities=17% Similarity=0.168 Sum_probs=58.5
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEE--EchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVS--VGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~--v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+|||.|++ .|.....+.+..+.+|.+++.+++-++.+++ +|.. ..+- ..|..+-+.+..
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~~~~---------- 205 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAW----QVINYREEDLVERLKEIT---------- 205 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHHHT----------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCCccHHHHHHHHh----------
Confidence 4689999943 4444444444457899999999999999887 4531 1111 123334343321
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|++|.-+ + .+.++.+.+.|+++|.+++
T Consensus 206 -----------------~~~~~D~vi~~~--g---------------~~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 206 -----------------GGKKVRVVYDSV--G---------------RDTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp -----------------TTCCEEEEEECS--C---------------GGGHHHHHHTEEEEEEEEE
T ss_pred -----------------CCCCceEEEECC--c---------------hHHHHHHHHHhcCCCEEEE
Confidence 234699998632 1 1246788899999998874
No 357
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=91.09 E-value=0.48 Score=47.12 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=36.4
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-.+.|++ +|.
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa 221 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGV 221 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TTC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCC
Confidence 56999999875 667777777778899999999999999987 553
No 358
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=91.03 E-value=0.46 Score=47.73 Aligned_cols=127 Identities=19% Similarity=0.092 Sum_probs=76.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhC-CC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQL-DF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~-~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+|+.+-+|.|++...+...- .+ .|.+||+|+..++..+..|+- ..++.+|..++..+..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----~~~~~~Di~~~~~~~~------------ 64 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----TQLLAKTIEGITLEEF------------ 64 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----SCEECSCGGGCCHHHH------------
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----cccccCCHHHccHhHc------------
Confidence 4689999999999998887753 23 689999999999999999852 3467888877643211
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCC-CC----CCCCCCCCChHHHHHHHHHccC--cCcEEEEEeCCC-Cch
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-NG----TSAPPVEFVRKDVLLAARLILS--DFGIFVMNVIPP-NRS 412 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-~g----~s~Pp~~f~~~efl~~~~~~L~--~~Gilv~N~~~~-~~~ 412 (478)
....+|+|+.+....+-+ .| ..- +..-+-.+|++.+ ..++ |.-+++=||.+- +..
T Consensus 65 ---------------~~~~~D~l~~gpPCq~fS~ag~~~g~~d-~r~~l~~~~~~~i-~~~~~~P~~~~~ENV~~l~~~~ 127 (343)
T 1g55_A 65 ---------------DRLSFDMILMSPPCQPFTRIGRQGDMTD-SRTNSFLHILDIL-PRLQKLPKYILLENVKGFEVSS 127 (343)
T ss_dssp ---------------HHHCCSEEEECCC-------------------CHHHHHHHHG-GGCSSCCSEEEEEEETTGGGSH
T ss_pred ---------------CcCCcCEEEEcCCCcchhhcCCcCCccC-ccchHHHHHHHHH-HHhcCCCCEEEEeCCccccCHH
Confidence 112589999975432211 01 000 0111123444443 4455 765666699764 334
Q ss_pred HHHHHHHHHHH
Q 038592 413 FYDMLIQEFRD 423 (478)
Q Consensus 413 ~~~~v~~~l~~ 423 (478)
.++.+++.|.+
T Consensus 128 ~~~~i~~~l~~ 138 (343)
T 1g55_A 128 TRDLLIQTIEN 138 (343)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45556666654
No 359
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=91.01 E-value=0.45 Score=50.84 Aligned_cols=119 Identities=14% Similarity=0.109 Sum_probs=72.1
Q ss_pred CCeEEEEeCchhHHHHHHHhhC--------------CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQL--------------DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLA 328 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~--------------~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~ 328 (478)
..+|+.-.||+|++.....++. ...+.++|+|+....+|+-.+-+...+.-++..+|.+.+-..
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~-- 295 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLR-- 295 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGG--
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchh--
Confidence 4589999999998654443321 246999999999999998654332233346788887753100
Q ss_pred hhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCC-----CCC-CCCCCCCChHHHHHHHHHccC-----
Q 038592 329 RQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-----NGT-SAPPVEFVRKDVLLAARLILS----- 397 (478)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-----~g~-s~Pp~~f~~~efl~~~~~~L~----- 397 (478)
. .....+||+|+....=+... ... ..++..=...-|++.+...|+
T Consensus 296 ~------------------------~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~ 351 (530)
T 3ufb_A 296 E------------------------MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHG 351 (530)
T ss_dssp G------------------------CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSS
T ss_pred h------------------------hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhc
Confidence 0 01345799999954211000 000 001112234568888888886
Q ss_pred --cCcEEEEEeC
Q 038592 398 --DFGIFVMNVI 407 (478)
Q Consensus 398 --~~Gilv~N~~ 407 (478)
+||.+++=+.
T Consensus 352 l~~gGr~avVlP 363 (530)
T 3ufb_A 352 SDNGGRAAVVVP 363 (530)
T ss_dssp SSSCCEEEEEEE
T ss_pred cCCCceEEEEec
Confidence 6898876543
No 360
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.98 E-value=0.68 Score=46.00 Aligned_cols=92 Identities=20% Similarity=0.243 Sum_probs=62.3
Q ss_pred CCeEEEEeC-c-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGV-G-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGl-G-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|+ | .|.++..+.+..+.+|.++ .+++-++.++++ |.. . +. ...|..+.+.+..
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l-Ga~--~-i~-~~~~~~~~~~~~~------------ 212 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL-GAT--P-ID-ASREPEDYAAEHT------------ 212 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH-TSE--E-EE-TTSCHHHHHHHHH------------
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc-CCC--E-ec-cCCCHHHHHHHHh------------
Confidence 569999994 3 4667767777778899999 899999999774 531 1 22 2234455554432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | .+.+..+.+.|+++|.+++
T Consensus 213 ---------------~~~g~D~vid~~-------g----------~~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 213 ---------------AGQGFDLVYDTL-------G----------GPVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp ---------------TTSCEEEEEESS-------C----------THHHHHHHHHEEEEEEEEE
T ss_pred ---------------cCCCceEEEECC-------C----------cHHHHHHHHHHhcCCeEEE
Confidence 245699887521 1 1367788889999999885
No 361
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.94 E-value=0.63 Score=45.85 Aligned_cols=95 Identities=21% Similarity=0.234 Sum_probs=59.7
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||.|+ |.|.....+.+..+.+|.+++.+++-++.++++ |.. .-+.....|..+-+.+..
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~-g~~--~~~d~~~~~~~~~i~~~~------------ 210 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKL-GCH--HTINYSTQDFAEVVREIT------------ 210 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCS--EEEETTTSCHHHHHHHHH------------
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-CCC--EEEECCCHHHHHHHHHHh------------
Confidence 568999995 345555555555678999999999988988774 531 101111124444444321
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|++|.-+ + + +.++.+.+.|+++|.+++
T Consensus 211 ---------------~~~~~d~vi~~~--g----~-----------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 211 ---------------GGKGVDVVYDSI--G----K-----------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp ---------------TTCCEEEEEECS--C----T-----------TTHHHHHHTEEEEEEEEE
T ss_pred ---------------CCCCCeEEEECC--c----H-----------HHHHHHHHhhccCCEEEE
Confidence 234699998622 1 0 246778889999998874
No 362
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.92 E-value=1.5 Score=40.41 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=37.2
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE 322 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~ 322 (478)
+|+|+|+| |..++..|.+. +.+|+++|.|++.++...+.++ ..++.+|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~~~~~~l~~~~~------~~~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDRELCEEFAKKLK------ATIIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHHSS------SEEEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHHHcC------CeEEEcCCCC
Confidence 69999986 33455555543 6799999999998887555443 5688888875
No 363
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=90.92 E-value=0.72 Score=44.41 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=33.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhC-CCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQL-DFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~ 303 (478)
..+|.+||+| |+.++..|.+.. +.+|.++|.+++.++.+++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~ 49 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE 49 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH
Confidence 3689999999 566777777653 6799999999998887765
No 364
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.91 E-value=5 Score=39.25 Aligned_cols=109 Identities=16% Similarity=0.102 Sum_probs=70.1
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCC-EEEEEECC--hHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDF-EVVGVEMD--EVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~-~V~~VEiD--p~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|.+||+| |+.++..|.+. +. +|++++.+ +...+.++++ |. + ...|..+.+++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~~~~~~~~~~~~~-g~------~-~~~~~~e~~~~----------- 83 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAASAESWRPRAEEL-GV------S-CKASVAEVAGE----------- 83 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSSCHHHHHHHHHHT-TC------E-ECSCHHHHHHH-----------
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCCCCHHHHHHHHHC-CC------E-EeCCHHHHHhc-----------
Confidence 3689999999 55677767665 56 99999997 5777776653 32 2 22344444332
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHH
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDML 417 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v 417 (478)
.|+||+-+ |+. ...+.++.+...|+++- +++++.+-.+.....+
T Consensus 84 ----------------------aDvVi~~v-----------p~~--~~~~~~~~l~~~l~~~~-ivvd~st~~~~~~~~~ 127 (312)
T 3qsg_A 84 ----------------------CDVIFSLV-----------TAQ--AALEVAQQAGPHLCEGA-LYADFTSCSPAVKRAI 127 (312)
T ss_dssp ----------------------CSEEEECS-----------CTT--THHHHHHHHGGGCCTTC-EEEECCCCCHHHHHHH
T ss_pred ----------------------CCEEEEec-----------Cch--hHHHHHHhhHhhcCCCC-EEEEcCCCCHHHHHHH
Confidence 58999933 222 23456788888888755 5557766666666666
Q ss_pred HHHHHHhcCc
Q 038592 418 IQEFRDVFQE 427 (478)
Q Consensus 418 ~~~l~~vF~~ 427 (478)
...+.+.+..
T Consensus 128 ~~~~~~~~~g 137 (312)
T 3qsg_A 128 GDVISRHRPS 137 (312)
T ss_dssp HHHHHHHCTT
T ss_pred HHHHHhhcCC
Confidence 7777766543
No 365
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.80 E-value=0.9 Score=43.51 Aligned_cols=41 Identities=27% Similarity=0.422 Sum_probs=31.6
Q ss_pred CeEEEEeCc--hhHHHHHHHhhC-CCEEEEEECChHHHHHHHHh
Q 038592 264 PKALCVGVG--GGALVSFLRTQL-DFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.+|.|||+| |++++..|.+.- ..+|.++|.+++.++.++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~ 45 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL 45 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC
Confidence 479999999 566777776542 23899999999988887654
No 366
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.77 E-value=2.3 Score=42.73 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=61.8
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEch---HHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGD---AIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~D---g~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|.|+ |.++..+.+..+ .+|.+++.+++-++.|++ +|.. .++..+ ..++.+++.+.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~-----~vi~~~~~~~~~~~~~v~~~------- 262 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGAD-----LTLNRRETSVEERRKAIMDI------- 262 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCS-----EEEETTTSCHHHHHHHHHHH-------
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-cCCc-----EEEeccccCcchHHHHHHHH-------
Confidence 46999999653 566666777778 599999999999999986 4531 223222 22333332111
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.....+|+||--+ +. .+.++.+.+.|+++|.+++
T Consensus 263 -----------------~~g~g~Dvvid~~--g~--------------~~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 263 -----------------THGRGADFILEAT--GD--------------SRALLEGSELLRRGGFYSV 296 (380)
T ss_dssp -----------------TTTSCEEEEEECS--SC--------------TTHHHHHHHHEEEEEEEEE
T ss_pred -----------------hCCCCCcEEEECC--CC--------------HHHHHHHHHHHhcCCEEEE
Confidence 0234699988521 10 1357778899999998875
No 367
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.76 E-value=0.85 Score=44.82 Aligned_cols=92 Identities=18% Similarity=0.285 Sum_probs=59.7
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE---chHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV---GDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v---~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||.|++ .|.....+....+.+|.+++.+++-++.+++ +|.. ..+-. .|..+.+.+.
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~~----~~~d~~~~~~~~~~~~~~---------- 210 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGFD----AAFNYKTVNSLEEALKKA---------- 210 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS----EEEETTSCSCHHHHHHHH----------
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCc----EEEecCCHHHHHHHHHHH----------
Confidence 4689999973 4554444555567899999999999998854 4531 11211 3444455442
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|++|.-+ | .+.++.+.+.|+++|.+++
T Consensus 211 ------------------~~~~~d~vi~~~-------g----------~~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 211 ------------------SPDGYDCYFDNV-------G----------GEFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp ------------------CTTCEEEEEESS-------C----------HHHHHHHHTTEEEEEEEEE
T ss_pred ------------------hCCCCeEEEECC-------C----------hHHHHHHHHHHhcCCEEEE
Confidence 224699988622 1 2347788899999998874
No 368
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.74 E-value=3.2 Score=42.76 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=29.6
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
+|.|||+| |+.++..|.+. +.+|+++|+|++.++..++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHhC
Confidence 78999999 44566666553 6799999999998887654
No 369
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.67 E-value=0.91 Score=44.78 Aligned_cols=43 Identities=16% Similarity=0.297 Sum_probs=31.3
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|||+| |+.++..|.+. +.+|++++.+++.++..++..+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~ 48 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK-GQSVLAWDIDAQRIKEIQDRGA 48 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHHTS
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHhcCC
Confidence 3589999998 34455555543 5789999999988877665533
No 370
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.65 E-value=0.23 Score=49.32 Aligned_cols=94 Identities=15% Similarity=0.224 Sum_probs=61.5
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|.|+ |.++..+.+..+. +|.+++.+++-++.++++ . +.-+.....|..+.+++.
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a---~~v~~~~~~~~~~~~~~~------------- 227 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A---DRLVNPLEEDLLEVVRRV------------- 227 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C---SEEECTTTSCHHHHHHHH-------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H---HhccCcCccCHHHHHHHh-------------
Confidence 46899999864 5666666666787 999999999988888764 2 110000012444444442
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ + ..+.++.+.+.|+++|.+++
T Consensus 228 ---------------~~~g~D~vid~~--g--------------~~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 228 ---------------TGSGVEVLLEFS--G--------------NEAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp ---------------HSSCEEEEEECS--C--------------CHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------cCCCCCEEEECC--C--------------CHHHHHHHHHHHhcCCEEEE
Confidence 134599998621 1 14577888999999998774
No 371
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=90.64 E-value=1.9 Score=41.43 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=30.5
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.+|.|||+| |..++..|.+. +.+|.+++.+++-++..++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~ 47 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNPEAIADVIAA 47 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT
T ss_pred ceEEEECchHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHC
Confidence 489999999 44566666654 67899999999887766554
No 372
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.63 E-value=1.2 Score=43.73 Aligned_cols=97 Identities=16% Similarity=0.174 Sum_probs=63.7
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||.|+|+ |.++..+.+..+ ..+.+++.+++-++.|+++ |.. .-+...-.|..+.++.+.
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l-Ga~--~~i~~~~~~~~~~~~~~~------------ 225 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF-GAM--QTFNSSEMSAPQMQSVLR------------ 225 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-TCS--EEEETTTSCHHHHHHHHG------------
T ss_pred CCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc-CCe--EEEeCCCCCHHHHHHhhc------------
Confidence 56899999885 445555666665 4778999999999999874 532 111111235555555532
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMN 405 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N 405 (478)
....+|+|+-.+ | ..+.++.+.+.|+++|.+++-
T Consensus 226 ---------------~~~g~d~v~d~~-------G---------~~~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 226 ---------------ELRFNQLILETA-------G---------VPQTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp ---------------GGCSSEEEEECS-------C---------SHHHHHHHHHHCCTTCEEEEC
T ss_pred ---------------ccCCcccccccc-------c---------ccchhhhhhheecCCeEEEEE
Confidence 234578776521 1 156788889999999998863
No 373
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.63 E-value=0.34 Score=47.39 Aligned_cols=41 Identities=12% Similarity=0.055 Sum_probs=32.1
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|.+||+| |..++..|.+. +.+|++++.+++.++.+.+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~ 49 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNPQACANLLAE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHc
Confidence 5689999999 45566666654 67999999999988876653
No 374
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.56 E-value=1.6 Score=37.80 Aligned_cols=55 Identities=16% Similarity=0.149 Sum_probs=35.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECC-hHHHHHHHHhcCCCCCCCeEEEEchHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMD-EVVLRVARQYFGLEDGEFLQVSVGDAIE 322 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiD-p~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~ 322 (478)
..+++|+|+| |..++..|.+. +.+|+++|.| ++-.+...+.+. ..+.++.+|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~ 60 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR-GQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSND 60 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCC
Confidence 3689999976 23345555442 6799999998 455544333332 247889999863
No 375
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.38 E-value=0.93 Score=44.88 Aligned_cols=43 Identities=19% Similarity=0.215 Sum_probs=33.8
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
..+|||+|+ |.|.++..+.+..+.+|.+++.+++-++.+++ +|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g 211 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LG 211 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC
Confidence 468999998 34556655666668899999999999999976 45
No 376
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.34 E-value=1.5 Score=45.33 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=34.2
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|||+|. |..+..+...++.+|+++|.++..++.+++ +|
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-~G 233 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVAS-LG 233 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH-TT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cC
Confidence 67999999994 544444555678899999999999999887 45
No 377
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.30 E-value=1.1 Score=44.74 Aligned_cols=95 Identities=19% Similarity=0.218 Sum_probs=59.9
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||.|+ |.|..+..+.+..+.+|.+++.+++-++.++++ |.. .-+.....|..+-+.+..
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~-ga~--~~~d~~~~~~~~~~~~~~------------ 235 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN-GAH--EVFNHREVNYIDKIKKYV------------ 235 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-TCS--EEEETTSTTHHHHHHHHH------------
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc-CCC--EEEeCCCchHHHHHHHHc------------
Confidence 468999997 345555555555678999999999999988764 431 111111123344443321
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||.-+ ..+.+..+.+.|+++|.+++
T Consensus 236 ---------------~~~~~D~vi~~~-----------------G~~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 236 ---------------GEKGIDIIIEML-----------------ANVNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp ---------------CTTCEEEEEESC-----------------HHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------CCCCcEEEEECC-----------------ChHHHHHHHHhccCCCEEEE
Confidence 234699997621 12356778899999998875
No 378
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=90.30 E-value=1.4 Score=43.19 Aligned_cols=106 Identities=11% Similarity=0.013 Sum_probs=65.1
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|.+||+| |..++..|.+. +.+|++++.+++-++.+.+. |. + ...|..+.+++
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~l~~~-g~------~-~~~~~~~~~~~-------------- 77 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTLSKCDELVEH-GA------S-VCESPAEVIKK-------------- 77 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSGGGGHHHHHT-TC------E-ECSSHHHHHHH--------------
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHC-CC------e-EcCCHHHHHHh--------------
Confidence 5789999999 45566666654 67999999999988776653 32 1 23344444432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH---HHHHHccCcCcEEEEEeCCCCchHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL---LAARLILSDFGIFVMNVIPPNRSFYDML 417 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl---~~~~~~L~~~Gilv~N~~~~~~~~~~~v 417 (478)
.|+||+-+ |..-...+.+ +.+...|+++ .+++++.+..+...+.+
T Consensus 78 -------------------aDvvi~~v------------p~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~ 125 (310)
T 3doj_A 78 -------------------CKYTIAML------------SDPCAALSVVFDKGGVLEQICEG-KGYIDMSTVDAETSLKI 125 (310)
T ss_dssp -------------------CSEEEECC------------SSHHHHHHHHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHH
T ss_pred -------------------CCEEEEEc------------CCHHHHHHHHhCchhhhhccCCC-CEEEECCCCCHHHHHHH
Confidence 58999833 2111123344 4445566664 55677776666655555
Q ss_pred HHHHHH
Q 038592 418 IQEFRD 423 (478)
Q Consensus 418 ~~~l~~ 423 (478)
...+.+
T Consensus 126 ~~~~~~ 131 (310)
T 3doj_A 126 NEAITG 131 (310)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555555
No 379
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.17 E-value=0.9 Score=46.54 Aligned_cols=37 Identities=24% Similarity=0.206 Sum_probs=28.9
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
+|.|||+| |+.++..|.+ +.+|+++|++++.++..++
T Consensus 2 kI~VIG~G~vG~~~A~~La~--G~~V~~~d~~~~~~~~l~~ 40 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL--QNEVTIVDILPSKVDKINN 40 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT--TSEEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHc
Confidence 78999999 4456665654 6899999999998876654
No 380
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.16 E-value=0.41 Score=47.79 Aligned_cols=91 Identities=13% Similarity=0.278 Sum_probs=59.8
Q ss_pred CeEEEEeCch-hHHH-HHHH-hhCCCE-EEEEECChH---HHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCC
Q 038592 264 PKALCVGVGG-GALV-SFLR-TQLDFE-VVGVEMDEV---VLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNP 336 (478)
Q Consensus 264 ~~VLvIGlGg-G~L~-~~L~-~~~~~~-V~~VEiDp~---Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~ 336 (478)
.+|||+|+|+ |.++ ..+. +..+.+ |.+++.+++ -.+.|++ +|.. .+.....|..+ +.+.
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lGa~---~v~~~~~~~~~-i~~~--------- 239 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LDAT---YVDSRQTPVED-VPDV--------- 239 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TTCE---EEETTTSCGGG-HHHH---------
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cCCc---ccCCCccCHHH-HHHh---------
Confidence 7999999853 6666 6666 667776 999999998 8888876 4531 11000123334 4431
Q ss_pred CCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 337 DSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.+ .+|+||--+ | ....++.+.+.|+++|.+++
T Consensus 240 -------------------~g-g~Dvvid~~-------g---------~~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 240 -------------------YE-QMDFIYEAT-------G---------FPKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp -------------------SC-CEEEEEECS-------C---------CHHHHHHHHHHEEEEEEEEE
T ss_pred -------------------CC-CCCEEEECC-------C---------ChHHHHHHHHHHhcCCEEEE
Confidence 12 699987511 1 13467888999999998875
No 381
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.09 E-value=0.73 Score=45.47 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=62.3
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE---chHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV---GDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v---~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|+ |.|.++..+.+..+.+|.+++.+++-++.+++.+|.. ..+-. .|..+.+++.
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~~~~~---------- 221 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD----DAFNYKEESDLTAALKRC---------- 221 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS----EEEETTSCSCSHHHHHHH----------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc----eEEecCCHHHHHHHHHHH----------
Confidence 468999996 3455555555566789999999999999998656642 11111 1334444442
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||.-+ | .+.++.+.+.|+++|.+++
T Consensus 222 ------------------~~~~~d~vi~~~-------g----------~~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 222 ------------------FPNGIDIYFENV-------G----------GKMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp ------------------CTTCEEEEEESS-------C----------HHHHHHHHTTEEEEEEEEE
T ss_pred ------------------hCCCCcEEEECC-------C----------HHHHHHHHHHHhcCCEEEE
Confidence 224699988621 1 2367888899999998875
No 382
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.02 E-value=1.4 Score=44.13 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=35.0
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-.+.+++-+|.
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa 233 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA 233 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC
Confidence 46999999763 5555556666788999999999988888866774
No 383
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.01 E-value=1.8 Score=42.68 Aligned_cols=106 Identities=12% Similarity=0.054 Sum_probs=64.5
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|.+||+| |..++..|.+. +.+|++++.+++-++...+. | ++ ...|..+.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~l~~~-g------~~-~~~~~~e~~---------------- 85 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEA-GYALQVWNRTPARAASLAAL-G------AT-IHEQARAAA---------------- 85 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHTT-T------CE-EESSHHHHH----------------
T ss_pred CCEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHC-C------CE-eeCCHHHHH----------------
Confidence 4699999999 44566666654 67999999999987766543 2 22 233444433
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHH--HHHHccCcCcEEEEEeCCCCchHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLL--AARLILSDFGIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~--~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 418 (478)
...|+||+-+ |..-...+.+. .+...|+++ .+++++.+......+.+.
T Consensus 86 -----------------~~aDvVi~~v------------p~~~~~~~v~~~~~~~~~l~~~-~~vi~~st~~~~~~~~~~ 135 (320)
T 4dll_A 86 -----------------RDADIVVSML------------ENGAVVQDVLFAQGVAAAMKPG-SLFLDMASITPREARDHA 135 (320)
T ss_dssp -----------------TTCSEEEECC------------SSHHHHHHHHTTTCHHHHCCTT-CEEEECSCCCHHHHHHHH
T ss_pred -----------------hcCCEEEEEC------------CCHHHHHHHHcchhHHhhCCCC-CEEEecCCCCHHHHHHHH
Confidence 1259999843 21112234444 455667764 456677666565555555
Q ss_pred HHHHH
Q 038592 419 QEFRD 423 (478)
Q Consensus 419 ~~l~~ 423 (478)
..+++
T Consensus 136 ~~~~~ 140 (320)
T 4dll_A 136 ARLGA 140 (320)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 384
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=89.91 E-value=0.28 Score=48.04 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=37.4
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
...||.+++|+|+++..+.. .+.++++||++|.++++|++.+.
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~-~g~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAAR-WGRRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHH-cCCeEEEEeCCHHHHHHHHHHHH
Confidence 45899999999999987765 47899999999999999998763
No 385
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=89.90 E-value=3.1 Score=43.61 Aligned_cols=101 Identities=10% Similarity=0.052 Sum_probs=63.2
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCC-CCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLED-GEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~-d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+|.|||+| |+.++..|.+. +.+|.+++.+++.++...+.+|... ..++. ...|..++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~-~~~~~~e~v~~--------------- 65 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAAS--------------- 65 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHH---------------
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeE-EECCHHHHHhc---------------
Confidence 79999999 55677666654 5789999999998887766555321 12232 23444444432
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
-+..|+||+=+ |..-...++++.+...|+++- +++++.+..
T Consensus 66 ---------------l~~aDvVilaV------------p~~~~v~~vl~~l~~~l~~g~-iIId~sng~ 106 (478)
T 1pgj_A 66 ---------------LKKPRKALILV------------QAGAATDSTIEQLKKVFEKGD-ILVDTGNAH 106 (478)
T ss_dssp ---------------BCSSCEEEECC------------CCSHHHHHHHHHHHHHCCTTC-EEEECCCCC
T ss_pred ---------------ccCCCEEEEec------------CChHHHHHHHHHHHhhCCCCC-EEEECCCCC
Confidence 12479999933 221124677888888898765 455665443
No 386
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.89 E-value=0.45 Score=47.52 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=60.6
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|++ .|.++..+.+..+.+|.+++.+++-++.+++. |.. .-+.....|..+.+.+.
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~--~~~~~~~~~~~~~~~~~------------- 231 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERL-GAK--RGINYRSEDFAAVIKAE------------- 231 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TCS--EEEETTTSCHHHHHHHH-------------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-CCC--EEEeCCchHHHHHHHHH-------------
Confidence 5689999643 46666666666788999999999999999874 532 11111112444444442
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | .+.++.+.+.|+++|.+++
T Consensus 232 ---------------~~~g~Dvvid~~-------g----------~~~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 232 ---------------TGQGVDIILDMI-------G----------AAYFERNIASLAKDGCLSI 263 (353)
T ss_dssp ---------------HSSCEEEEEESC-------C----------GGGHHHHHHTEEEEEEEEE
T ss_pred ---------------hCCCceEEEECC-------C----------HHHHHHHHHHhccCCEEEE
Confidence 234699887621 1 1146778889999998774
No 387
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.88 E-value=0.97 Score=45.34 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=62.3
Q ss_pred CCeEEEEe-Cc-hhHHHHHHHhh-CCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE--chHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVG-VG-GGALVSFLRTQ-LDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV--GDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIG-lG-gG~L~~~L~~~-~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v--~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+| .| .|.++..+.+. .+.+|.+++.+++-.+.+++ +|.. .++. .|..+.+++
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGad-----~vi~~~~~~~~~v~~----------- 234 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGAH-----HVIDHSKPLAAEVAA----------- 234 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTCS-----EEECTTSCHHHHHHT-----------
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCCC-----EEEeCCCCHHHHHHH-----------
Confidence 45899999 44 47777777776 47899999999999999987 5642 1111 132333322
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.....+|+||--+ -..+.++.+.+.|+++|.+++
T Consensus 235 -----------------~~~~g~Dvvid~~----------------g~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 235 -----------------LGLGAPAFVFSTT----------------HTDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp -----------------TCSCCEEEEEECS----------------CHHHHHHHHHHHSCTTCEEEE
T ss_pred -----------------hcCCCceEEEECC----------------CchhhHHHHHHHhcCCCEEEE
Confidence 1345799887521 124578889999999999885
No 388
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.82 E-value=0.9 Score=45.16 Aligned_cols=92 Identities=13% Similarity=0.190 Sum_probs=60.9
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEE--chHHHHHHHHHhhhcCCCCCC
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSV--GDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v--~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
.+|||.|++ .|.++..+.+..+. +|.+++.+++-.+.+++.+|.. ..+-. .|..+.+.+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~~~~----------- 226 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD----AAINYKKDNVAEQLRES----------- 226 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS----EEEETTTSCHHHHHHHH-----------
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----eEEecCchHHHHHHHHh-----------
Confidence 799999973 35555555555677 9999999999888888766642 11111 2334444432
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|++|--+ | .+.++.+.+.|+++|.+++
T Consensus 227 -----------------~~~~~d~vi~~~-------G----------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 227 -----------------CPAGVDVYFDNV-------G----------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp -----------------CTTCEEEEEESC-------C----------HHHHHHHHHTEEEEEEEEE
T ss_pred -----------------cCCCCCEEEECC-------C----------HHHHHHHHHHhccCcEEEE
Confidence 122699988621 1 2567888899999998874
No 389
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.77 E-value=0.97 Score=44.81 Aligned_cols=93 Identities=15% Similarity=0.118 Sum_probs=61.1
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEE---EchHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVS---VGDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~---v~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|++ .|.....+.+..+.+|.+++.+++-.+.+++ +|.. ..+- ..|..+.+++..
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g~~----~~~d~~~~~~~~~~~~~~~--------- 235 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGE----VFIDFTKEKDIVGAVLKAT--------- 235 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TTCC----EEEETTTCSCHHHHHHHHH---------
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cCCc----eEEecCccHhHHHHHHHHh---------
Confidence 4689999983 4555555555567899999999998888876 4531 1111 124444554421
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
.. .+|+||.-+ | ..+.++.+.+.|+++|.++.
T Consensus 236 ------------------~~-~~D~vi~~~-------g---------~~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 236 ------------------DG-GAHGVINVS-------V---------SEAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp ------------------TS-CEEEEEECS-------S---------CHHHHHHHTTSEEEEEEEEE
T ss_pred ------------------CC-CCCEEEECC-------C---------cHHHHHHHHHHHhcCCEEEE
Confidence 23 699998722 1 13578888899999998764
No 390
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.75 E-value=1 Score=44.73 Aligned_cols=92 Identities=9% Similarity=0.100 Sum_probs=62.3
Q ss_pred CCeEEEEeC-c-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE--chHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGV-G-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV--GDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGl-G-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v--~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+|||+|+ | .|.++..+.+..+.+|.+++.+++-++.+++ +|.. .++. .|..+.+++.
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~-----~vi~~~~~~~~~~~~~----------- 213 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGAD-----IVLNHKESLLNQFKTQ----------- 213 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCS-----EEECTTSCHHHHHHHH-----------
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCc-----EEEECCccHHHHHHHh-----------
Confidence 468999953 3 3566666666778899999999999999988 4532 1111 2333444332
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+|+--+ -....++.+.+.|+++|.++.
T Consensus 214 -----------------~~~g~Dvv~d~~----------------g~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 214 -----------------GIELVDYVFCTF----------------NTDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp -----------------TCCCEEEEEESS----------------CHHHHHHHHHHHEEEEEEEEE
T ss_pred -----------------CCCCccEEEECC----------------CchHHHHHHHHHhccCCEEEE
Confidence 245699887611 125678889999999999874
No 391
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=89.52 E-value=0.68 Score=48.90 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=66.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC-----CCCCCCeEEEEchHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG-----LEDGEFLQVSVGDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg-----~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|.|||+| |++++..+.+. +.+|+++|++++.++.++++.. +....++. ..+....+..+ .
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~--~~~~~~~~~~i-~------ 74 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH-GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLT--AETCERTLKRL-I------ 74 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSC--HHHHHHHHHTE-E------
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCC--HHHHHHHHhce-e------
Confidence 3589999999 56677666654 6799999999999998876521 11111110 00001111100 0
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCC-ChHHHHHHHHHccCcCcEEEEEeCCCCc
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEF-VRKDVLLAARLILSDFGIFVMNVIPPNR 411 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~N~~~~~~ 411 (478)
... + ...-..-|+||.-+ |+.. ...+++..+...++++-+++.|..+-..
T Consensus 75 --~~~-------~-----~~~~~~aDlVIeAV------------pe~~~vk~~v~~~l~~~~~~~~IlasntSti~i 125 (483)
T 3mog_A 75 --PVT-------D-----IHALAAADLVIEAA------------SERLEVKKALFAQLAEVCPPQTLLTTNTSSISI 125 (483)
T ss_dssp --EEC-------C-----GGGGGGCSEEEECC------------CCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH
T ss_pred --EeC-------C-----HHHhcCCCEEEEcC------------CCcHHHHHHHHHHHHHhhccCcEEEecCCCCCH
Confidence 000 0 00113469999833 3332 3468899999999999999888877643
No 392
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=89.44 E-value=3.8 Score=43.05 Aligned_cols=113 Identities=12% Similarity=-0.009 Sum_probs=68.9
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+++|.+||+| |+.++..|.+. +.+|.+++.+++.++...+..+ ++.++. ..|..+.+++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~~~~~~l~~~~~---~~gi~~-~~s~~e~v~~-------------- 75 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSREKTEEVIAENP---GKKLVP-YYTVKEFVES-------------- 75 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSHHHHHHHHHHST---TSCEEE-CSSHHHHHHT--------------
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhCC---CCCeEE-eCCHHHHHhC--------------
Confidence 5689999999 55677766653 6789999999998876655432 122332 2344444321
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
-.+.|+||+-+ |..-...++++.+...|+++- +++++.+........+.+.
T Consensus 76 ----------------l~~aDvVil~V------------p~~~~v~~vl~~l~~~l~~g~-iIId~s~g~~~~t~~l~~~ 126 (480)
T 2zyd_A 76 ----------------LETPRRILLMV------------KAGAGTDAAIDSLKPYLDKGD-IIIDGGNTFFQDTIRRNRE 126 (480)
T ss_dssp ----------------BCSSCEEEECS------------CSSSHHHHHHHHHGGGCCTTC-EEEECSCCCHHHHHHHHHH
T ss_pred ----------------CCCCCEEEEEC------------CCHHHHHHHHHHHHhhcCCCC-EEEECCCCCHHHHHHHHHH
Confidence 12479999943 221134678888888888755 5557766544333333444
Q ss_pred HHH
Q 038592 421 FRD 423 (478)
Q Consensus 421 l~~ 423 (478)
+.+
T Consensus 127 l~~ 129 (480)
T 2zyd_A 127 LSA 129 (480)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 393
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.38 E-value=0.67 Score=47.56 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=32.9
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|||+|. |..+..+...++.+|+++|.++..++.+++ +|
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lG 227 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VG 227 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TT
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC
Confidence 67999999994 444333444458899999999999998877 44
No 394
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.38 E-value=2.2 Score=41.33 Aligned_cols=95 Identities=14% Similarity=0.045 Sum_probs=62.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
..+|.+||+| |++++..|.+.- ..+|.+++.+++-++...+.+|. ++ ..|..+.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi------~~-~~~~~~~~-------------- 61 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGV------HT-TQDNRQGA-------------- 61 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCC------EE-ESCHHHHH--------------
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCC------EE-eCChHHHH--------------
Confidence 3589999999 566777776642 23899999999988877765553 22 33444433
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHc-cCcCcEEEEEeCCCC
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLI-LSDFGIFVMNVIPPN 410 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~-L~~~Gilv~N~~~~~ 410 (478)
...|+||+-+ ||. .-.+.++.++.. |+++-+++.+..+-.
T Consensus 62 -------------------~~aDvVilav-----------~p~--~~~~vl~~l~~~~l~~~~iiiS~~agi~ 102 (280)
T 3tri_A 62 -------------------LNADVVVLAV-----------KPH--QIKMVCEELKDILSETKILVISLAVGVT 102 (280)
T ss_dssp -------------------SSCSEEEECS-----------CGG--GHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred -------------------hcCCeEEEEe-----------CHH--HHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence 1369999933 232 347888999888 877656664444433
No 395
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=89.35 E-value=2.9 Score=40.20 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
+.+|.+||+| |+.++..|.+. +.+|++++.+++-.+...+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~ 45 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE-GVTVYAFDLMEANVAAVVA 45 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHT
T ss_pred CCEEEEECccHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHH
Confidence 4689999999 45566666653 6799999999987776554
No 396
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.19 E-value=0.81 Score=45.82 Aligned_cols=91 Identities=16% Similarity=0.196 Sum_probs=61.4
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE---chHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV---GDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v---~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|+ |.|.++..+.+..+.+|.+++.+++-++.+++ +|.. .++. .|..+.+++.
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~-----~~~~~~~~~~~~~~~~~---------- 227 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCD-----RPINYKTEPVGTVLKQE---------- 227 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS-----EEEETTTSCHHHHHHHH----------
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCCc-----EEEecCChhHHHHHHHh----------
Confidence 469999993 35666666666678899999999999999987 5532 1211 2333444331
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ | ...++.+.+.|+++|.+++
T Consensus 228 ------------------~~~g~D~vid~~-------g----------~~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 228 ------------------YPEGVDVVYESV-------G----------GAMFDLAVDALATKGRLIV 259 (362)
T ss_dssp ------------------CTTCEEEEEECS-------C----------THHHHHHHHHEEEEEEEEE
T ss_pred ------------------cCCCCCEEEECC-------C----------HHHHHHHHHHHhcCCEEEE
Confidence 234699988621 1 1367888899999998875
No 397
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=89.19 E-value=2.2 Score=43.46 Aligned_cols=117 Identities=15% Similarity=0.054 Sum_probs=70.8
Q ss_pred CeEEEEeCchhHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 264 PKALCVGVGGGALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 264 ~~VLvIGlGgG~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
.+++.+-+|.|++...+.+. ++ .|.+||+|+..++..+..|. ...++.+|..++..+.....
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N~~-----~~~~~~~DI~~~~~~~~~~~----------- 65 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAINFP-----RSLHVQEDVSLLNAEIIKGF----------- 65 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHHCT-----TSEEECCCGGGCCHHHHHHH-----------
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHhCC-----CCceEecChhhcCHHHHHhh-----------
Confidence 48999999999998888765 45 46799999999999998874 35778888876532211000
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCC-CCCCC--CCCCChHHHHHHHHHccCcCcEEEEEeCCC
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARN-GTSAP--PVEFVRKDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~-g~s~P--p~~f~~~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
......+|+|+.+..+.+-+. |-... +..-+-.+|++.+. .++|.=+++=||..-
T Consensus 66 -----------~~~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~-~~~P~~~v~ENV~gl 123 (376)
T 3g7u_A 66 -----------FKNDMPIDGIIGGPPCQGFSSIGKGNPDDSRNQLYMHFYRLVS-ELQPLFFLAENVPGI 123 (376)
T ss_dssp -----------HCSCCCCCEEEECCCCCTTC-------CHHHHHHHHHHHHHHH-HHCCSEEEEEECTTT
T ss_pred -----------cccCCCeeEEEecCCCCCcccccCCCCCCchHHHHHHHHHHHH-HhCCCEEEEecchHh
Confidence 002356999999654322110 10000 00012234444443 468876666698664
No 398
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.12 E-value=0.55 Score=46.94 Aligned_cols=44 Identities=20% Similarity=0.284 Sum_probs=34.9
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+|+|+ |.++..+.+..+.+|.+++.+++-++.|++ +|.
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa 224 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGA 224 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCC
Confidence 46999999863 666666666668899999999999999987 563
No 399
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.09 E-value=3.1 Score=41.93 Aligned_cols=44 Identities=16% Similarity=0.270 Sum_probs=32.2
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|+|+|+ |.....+....+.+|+++|.+++-++.+++.++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g 210 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG 210 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC
Confidence 57999999963 333333333457899999999998888877665
No 400
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=89.01 E-value=1.8 Score=44.38 Aligned_cols=43 Identities=19% Similarity=0.186 Sum_probs=33.5
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|+|+|. |..+..+...++.+|+++|.++...+.++++ |
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~l-G 215 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSM-G 215 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHT-T
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc-C
Confidence 67999999984 5444445556788999999999998888654 5
No 401
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.96 E-value=1.5 Score=42.31 Aligned_cols=105 Identities=11% Similarity=0.073 Sum_probs=63.7
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.+|.+||+| |..++..|.+. +.+|++++.+++-++...+. |. + ...|..+.+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~~~~~~~~~~-g~------~-~~~~~~~~~~~--------------- 57 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNPAKCAPLVAL-GA------R-QASSPAEVCAA--------------- 57 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHH-TCCEEEECSSGGGGHHHHHH-TC------E-ECSCHHHHHHH---------------
T ss_pred CeEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCHHHHHHHHHC-CC------e-ecCCHHHHHHc---------------
Confidence 479999999 45577666655 67899999999887766554 21 1 23344444432
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHH---HHHHHccCcCcEEEEEeCCCCchHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVL---LAARLILSDFGIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl---~~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 418 (478)
.|+||+-+ |..-...+.+ +.+...|+++. +++++.+......+.+.
T Consensus 58 ------------------advvi~~v------------~~~~~~~~v~~~~~~l~~~l~~g~-~vv~~st~~~~~~~~~~ 106 (287)
T 3pdu_A 58 ------------------CDITIAML------------ADPAAAREVCFGANGVLEGIGGGR-GYIDMSTVDDETSTAIG 106 (287)
T ss_dssp ------------------CSEEEECC------------SSHHHHHHHHHSTTCGGGTCCTTC-EEEECSCCCHHHHHHHH
T ss_pred ------------------CCEEEEEc------------CCHHHHHHHHcCchhhhhcccCCC-EEEECCCCCHHHHHHHH
Confidence 58999833 2111123444 44556666654 55677766555555555
Q ss_pred HHHHH
Q 038592 419 QEFRD 423 (478)
Q Consensus 419 ~~l~~ 423 (478)
+.+.+
T Consensus 107 ~~~~~ 111 (287)
T 3pdu_A 107 AAVTA 111 (287)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 402
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=88.91 E-value=1.8 Score=40.86 Aligned_cols=34 Identities=24% Similarity=0.216 Sum_probs=27.6
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVV 297 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~V 297 (478)
..+|.+||+| |++++..|.+. +.+|++++.+++-
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDPKA 54 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCChhh
Confidence 5799999999 56677777654 6799999999985
No 403
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=88.88 E-value=1.2 Score=43.99 Aligned_cols=74 Identities=15% Similarity=0.012 Sum_probs=49.3
Q ss_pred CCceeEEEEeCCCCCCCCCCC---CC-CCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHHHHhcCccEEEe
Q 038592 357 DNKFDVIMVDLDSGDARNGTS---AP-PVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEFRDVFQELYEID 432 (478)
Q Consensus 357 ~~~yDvIivDv~s~d~~~g~s---~P-p~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l~~vF~~v~~~~ 432 (478)
..+||+||+|+-.... |.. |- .....+- .+..+.++|+|||.|++=++.-.....+.++..|++.|..+..++
T Consensus 204 ~~k~DvV~SDMApn~s--Gh~yqQC~DHarii~L-al~fA~~vLkPGGtfV~KvyggaDr~se~lv~~LaR~F~~Vr~vK 280 (320)
T 2hwk_A 204 VPKYDIIFVNVRTPYK--YHHYQQCEDHAIKLSM-LTKKACLHLNPGGTCVSIGYGYADRASESIIGAIARQFKFSRVCK 280 (320)
T ss_dssp SCCEEEEEEECCCCCC--SCHHHHHHHHHHHHHH-THHHHGGGEEEEEEEEEEECCCCSHHHHHHHHHHHTTEEEEEEEC
T ss_pred cCcCCEEEEcCCCCCC--CccccccchHHHHHHH-HHHHHHHhcCCCceEEEEEecCCcccHHHHHHHHHHhcceeeeeC
Confidence 3679999999743211 210 00 0000011 445666899999999998887754446889999999999998886
Q ss_pred e
Q 038592 433 V 433 (478)
Q Consensus 433 v 433 (478)
.
T Consensus 281 P 281 (320)
T 2hwk_A 281 P 281 (320)
T ss_dssp C
T ss_pred C
Confidence 4
No 404
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=88.70 E-value=1.9 Score=42.98 Aligned_cols=123 Identities=17% Similarity=0.125 Sum_probs=78.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
+.+++.+.+|.|++...+... ++ .|.+||+|+..++..+..|+-.. .+|..++..+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~--------------- 67 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEK--------------- 67 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGG---------------
T ss_pred CCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHh---------------
Confidence 468999999999999888765 55 57889999999999999886321 5777665321
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCC-C----CCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC----Cch
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-N----GTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP----NRS 412 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-~----g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~----~~~ 412 (478)
.-..+|+|+.+....+.+ . |+.. +..-+-.+|++.++. ++|.-+++=||..- ...
T Consensus 68 --------------~~~~~D~l~~gpPCQ~fS~ag~~~g~~d-~r~~L~~~~~r~i~~-~~P~~~~~ENV~gl~~~~~~~ 131 (327)
T 2c7p_A 68 --------------TIPDHDILCAGFPCQAFSISGKQKGFED-SRGTLFFDIARIVRE-KKPKVVFMENVKNFASHDNGN 131 (327)
T ss_dssp --------------GSCCCSEEEEECCCTTTCTTSCCCGGGS-TTSCHHHHHHHHHHH-HCCSEEEEEEEGGGGTGGGGH
T ss_pred --------------hCCCCCEEEECCCCCCcchhcccCCCcc-hhhHHHHHHHHHHHh-ccCcEEEEeCcHHHHhccccH
Confidence 123589999976443322 1 1111 122233566666654 68876666699653 223
Q ss_pred HHHHHHHHHHHh
Q 038592 413 FYDMLIQEFRDV 424 (478)
Q Consensus 413 ~~~~v~~~l~~v 424 (478)
.++.+++.|.+.
T Consensus 132 ~~~~i~~~l~~~ 143 (327)
T 2c7p_A 132 TLEVVKNTMNEL 143 (327)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 456666666553
No 405
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.68 E-value=0.84 Score=45.27 Aligned_cols=94 Identities=19% Similarity=0.364 Sum_probs=59.7
Q ss_pred CCeEEEEeCch--hHHHHHHHhhC-CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEE--chHHHHHHHHHhhhcCCCCC
Q 038592 263 RPKALCVGVGG--GALVSFLRTQL-DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSV--GDAIEFLEKLARQIVGKNPD 337 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v--~Dg~~~l~~~~~~~~~~~~~ 337 (478)
..+|||+|+|+ |.++..+.+.. +.+|.+++.+++-++.++++ |.. ..+.. .|..+.+.+..
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~-g~~----~~~~~~~~~~~~~~~~~~--------- 236 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GAD----YVINASMQDPLAEIRRIT--------- 236 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCS----EEEETTTSCHHHHHHHHT---------
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-CCC----EEecCCCccHHHHHHHHh---------
Confidence 46899999874 34444444455 78999999999999999764 531 11111 23333343321
Q ss_pred CCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 338 SFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
....+|+||--+ + ..+.++.+.+.|+++|.+++
T Consensus 237 ------------------~~~~~d~vi~~~--g--------------~~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 237 ------------------ESKGVDAVIDLN--N--------------SEKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp ------------------TTSCEEEEEESC--C--------------CHHHHTTGGGGEEEEEEEEE
T ss_pred ------------------cCCCceEEEECC--C--------------CHHHHHHHHHHHhcCCEEEE
Confidence 114799988622 1 13467778889999998875
No 406
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.63 E-value=1.6 Score=42.87 Aligned_cols=108 Identities=14% Similarity=0.179 Sum_probs=65.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCC-CCCCeEEE-----EchHHHHHHHHHhhhcCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLE-DGEFLQVS-----VGDAIEFLEKLARQIVGK 334 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~-----v~Dg~~~l~~~~~~~~~~ 334 (478)
+.+|+|||+| |++++..|.+. +.+|+.+ .+++.++..++. |+. ..+..... ..|. +
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~~~~~~~i~~~-g~~~~~~~~~~~~~~~~~~~~-~------------ 82 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA-GHEVILI-ARPQHVQAIEAT-GLRLETQSFDEQVKVSASSDP-S------------ 82 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT-TCEEEEE-CCHHHHHHHHHH-CEEEECSSCEEEECCEEESCG-G------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHC-CCeEEEE-EcHhHHHHHHhC-CeEEEcCCCcEEEeeeeeCCH-H------------
Confidence 5799999999 55677666653 5799999 999888776653 211 01111111 1111 0
Q ss_pred CCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHH
Q 038592 335 NPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFY 414 (478)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~ 414 (478)
....+|+||+-+ |.. ...+.++.++..|+++-+++...-+-...
T Consensus 83 ---------------------~~~~~D~vilav------------k~~-~~~~~l~~l~~~l~~~~~iv~~~nGi~~~-- 126 (318)
T 3hwr_A 83 ---------------------AVQGADLVLFCV------------KST-DTQSAALAMKPALAKSALVLSLQNGVENA-- 126 (318)
T ss_dssp ---------------------GGTTCSEEEECC------------CGG-GHHHHHHHHTTTSCTTCEEEEECSSSSHH--
T ss_pred ---------------------HcCCCCEEEEEc------------ccc-cHHHHHHHHHHhcCCCCEEEEeCCCCCcH--
Confidence 123589999932 222 45788999999999887666443333221
Q ss_pred HHHHHHHHHhcC
Q 038592 415 DMLIQEFRDVFQ 426 (478)
Q Consensus 415 ~~v~~~l~~vF~ 426 (478)
..+.+.|+
T Consensus 127 ----~~l~~~~~ 134 (318)
T 3hwr_A 127 ----DTLRSLLE 134 (318)
T ss_dssp ----HHHHHHCC
T ss_pred ----HHHHHHcC
Confidence 35667774
No 407
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=88.60 E-value=0.64 Score=48.68 Aligned_cols=57 Identities=28% Similarity=0.401 Sum_probs=41.6
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH--HHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE--FLEK 326 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~--~l~~ 326 (478)
.-+|+|+|+| |-.+++.|... +..|++||.|++.++.+.+.|+ +.+++|||.+ .|++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~~~~~~~~~~~~------~~~i~Gd~~~~~~L~~ 63 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE-NNDITIVDKDGDRLRELQDKYD------LRVVNGHASHPDVLHE 63 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST-TEEEEEEESCHHHHHHHHHHSS------CEEEESCTTCHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHhcC------cEEEEEcCCCHHHHHh
Confidence 3589999998 33344444321 5699999999999998877765 5789999976 4655
No 408
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.56 E-value=1.3 Score=44.19 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=34.8
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+|.|+ |.++..+.+..+.+|.+++.+++-.+.+++-+|.
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa 226 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA 226 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC
Confidence 46999999763 5555556655678999999999999888866774
No 409
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.45 E-value=2.8 Score=43.78 Aligned_cols=137 Identities=10% Similarity=0.017 Sum_probs=69.7
Q ss_pred CCeEEEEeCchhH--HHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGA--LVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~--L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..|+.+||+|.=+ ++..|.+. +.+|+++|+|++.++..++.-.....+ +.-+++++.... .+..-+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~kv~~l~~g~~~~~ep-------gl~~~~~~~~~~---g~l~~tt 76 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDARKIELLHQNVMPIYEP-------GLDALVASNVKA---GRLSFTT 76 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHTTTCCSSCCT-------THHHHHHHHHHT---TCEEEES
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHhcCCCCccCC-------CHHHHHHhhccc---CCEEEEC
Confidence 4799999999433 44444443 689999999999888766521100111 122233221110 0000000
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCC-CCCCCCCCCC-ChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-NGTSAPPVEF-VRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-~g~s~Pp~~f-~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 418 (478)
.+ ...-..-|+||+-+..+... .+ . | .+ +-.+.++.+...|+++-+ +++..+-.+...+.+.
T Consensus 77 d~-----------~ea~~~aDvvii~Vptp~~~~~~--~-~-Dl~~v~~v~~~i~~~l~~g~i-VV~~STv~pgtt~~l~ 140 (446)
T 4a7p_A 77 DL-----------AEGVKDADAVFIAVGTPSRRGDG--H-A-DLSYVFAAAREIAENLTKPSV-IVTKSTVPVGTGDEVE 140 (446)
T ss_dssp CH-----------HHHHTTCSEEEECCCCCBCTTTC--C-B-CTHHHHHHHHHHHHSCCSCCE-EEECSCCCTTHHHHHH
T ss_pred CH-----------HHHHhcCCEEEEEcCCCCccccC--C-c-cHHHHHHHHHHHHHhcCCCCE-EEEeCCCCchHHHHHH
Confidence 00 00012368999965332110 11 0 1 11 235667788888887655 4555444455556666
Q ss_pred HHHHHhcC
Q 038592 419 QEFRDVFQ 426 (478)
Q Consensus 419 ~~l~~vF~ 426 (478)
..+.+..+
T Consensus 141 ~~l~e~~~ 148 (446)
T 4a7p_A 141 RIIAEVAP 148 (446)
T ss_dssp HHHHHHST
T ss_pred HHHHHhCC
Confidence 66666543
No 410
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.43 E-value=1.4 Score=41.98 Aligned_cols=92 Identities=24% Similarity=0.240 Sum_probs=58.2
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcc
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGAC 342 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~ 342 (478)
+|.+||+| |+.++..|.+. +.+|.+++.+++-++.++++ |... + ...|.. +
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~~-g~~~----~-~~~~~~----~---------------- 54 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQSTCEKAVER-QLVD----E-AGQDLS----L---------------- 54 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TSCS----E-EESCGG----G----------------
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHhC-CCCc----c-ccCCHH----H----------------
Confidence 68999998 45666666653 56999999999988877653 4321 1 112211 1
Q ss_pred cccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCc
Q 038592 343 SLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNR 411 (478)
Q Consensus 343 ~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~ 411 (478)
. ...|+|++-+ || . ...++++.+...|+++.+ ++++.+-..
T Consensus 55 -------------~-~~~D~vi~av-----------~~-~-~~~~~~~~l~~~~~~~~~-vv~~~~~~~ 95 (279)
T 2f1k_A 55 -------------L-QTAKIIFLCT-----------PI-Q-LILPTLEKLIPHLSPTAI-VTDVASVKT 95 (279)
T ss_dssp -------------G-TTCSEEEECS-----------CH-H-HHHHHHHHHGGGSCTTCE-EEECCSCCH
T ss_pred -------------h-CCCCEEEEEC-----------CH-H-HHHHHHHHHHhhCCCCCE-EEECCCCcH
Confidence 2 4589999932 22 2 346778888888887654 567744333
No 411
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=88.38 E-value=0.66 Score=47.47 Aligned_cols=24 Identities=13% Similarity=0.102 Sum_probs=21.1
Q ss_pred HHHHHHHHccCcCcEEEEEeCCCC
Q 038592 387 DVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 387 efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
.||+..++.|+|||.+++.+.++.
T Consensus 206 ~fL~~ra~eL~pGG~mvl~~~gr~ 229 (374)
T 3b5i_A 206 EFLRARAAEVKRGGAMFLVCLGRT 229 (374)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEEEecCC
Confidence 478899999999999999988773
No 412
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=88.21 E-value=1.6 Score=43.84 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=30.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
.++|.|||+| |..++..+...++.+|.+++.++.-.+.+.+
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~ 205 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA 205 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh
Confidence 5689999999 5567776652467899999998765555544
No 413
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=88.11 E-value=1.6 Score=44.25 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=34.0
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+.+|+|+|+|. |..+..+.+.++.+|+++|.++...+.+++ +|
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~G 215 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LG 215 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC
Confidence 68999999984 544555555678899999999998888877 55
No 414
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=87.98 E-value=3.6 Score=40.14 Aligned_cols=105 Identities=11% Similarity=-0.031 Sum_probs=64.5
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|.+||+| |..++..|.+. +.+|++++.+++-++.+.+. |. ....|..+.+++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~~~~~-g~-------~~~~~~~e~~~~-------------- 65 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSPGKAAALVAA-GA-------HLCESVKAALSA-------------- 65 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHH-TC-------EECSSHHHHHHH--------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHC-CC-------eecCCHHHHHhc--------------
Confidence 4689999999 55677766654 67899999999988876654 32 123454554432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHH--HHHHccCcCcEEEEEeCCCCchHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLL--AARLILSDFGIFVMNVIPPNRSFYDMLI 418 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~--~~~~~L~~~Gilv~N~~~~~~~~~~~v~ 418 (478)
.|+||+-+ |..-...+.+. .+.. +.+ |.+++|+.+..+...+.+.
T Consensus 66 -------------------aDvVi~~v------------p~~~~~~~v~~~~~l~~-~~~-g~ivid~st~~~~~~~~l~ 112 (306)
T 3l6d_A 66 -------------------SPATIFVL------------LDNHATHEVLGMPGVAR-ALA-HRTIVDYTTNAQDEGLALQ 112 (306)
T ss_dssp -------------------SSEEEECC------------SSHHHHHHHHTSTTHHH-HTT-TCEEEECCCCCTTHHHHHH
T ss_pred -------------------CCEEEEEe------------CCHHHHHHHhcccchhh-ccC-CCEEEECCCCCHHHHHHHH
Confidence 58999833 21111233443 3333 344 5566788776666556666
Q ss_pred HHHHH
Q 038592 419 QEFRD 423 (478)
Q Consensus 419 ~~l~~ 423 (478)
+.+++
T Consensus 113 ~~~~~ 117 (306)
T 3l6d_A 113 GLVNQ 117 (306)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66655
No 415
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.83 E-value=1.3 Score=38.61 Aligned_cols=52 Identities=23% Similarity=0.267 Sum_probs=33.5
Q ss_pred CCeEEEEeCch-h-HHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHH
Q 038592 263 RPKALCVGVGG-G-ALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAI 321 (478)
Q Consensus 263 ~~~VLvIGlGg-G-~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~ 321 (478)
..+|+|+|+|. | .++..|.. .+.+|+++|.+++.++.+++.+ ...++.+|..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~~~~~~~~~~~------g~~~~~~d~~ 72 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNEYAFHRLNSEF------SGFTVVGDAA 72 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCGGGGGGSCTTC------CSEEEESCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCHHHHHHHHhcC------CCcEEEecCC
Confidence 57999999873 3 34455544 3679999999998765543211 2456666653
No 416
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=87.63 E-value=1.3 Score=43.22 Aligned_cols=104 Identities=10% Similarity=0.032 Sum_probs=64.3
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.+|.+||+| |..++..|.+. +.+|+++|.+++.++.+.+. | ++ ...|..+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~~~~~~~~~-g------~~-~~~~~~~~------------------ 68 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIEAMTPLAEA-G------AT-LADSVADV------------------ 68 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTTTSHHHHHT-T------CE-ECSSHHHH------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHC-C------CE-EcCCHHHH------------------
Confidence 589999999 45566666543 67999999999887776553 2 11 12232222
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHHH
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQEF 421 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~l 421 (478)
-. .|+||+-+ |..-...+.++.+...|+++- ++++..+......+.+.+.+
T Consensus 69 ---------------~~-aDvvi~~v------------p~~~~~~~v~~~l~~~l~~g~-ivv~~st~~~~~~~~~~~~~ 119 (296)
T 3qha_A 69 ---------------AA-ADLIHITV------------LDDAQVREVVGELAGHAKPGT-VIAIHSTISDTTAVELARDL 119 (296)
T ss_dssp ---------------TT-SSEEEECC------------SSHHHHHHHHHHHHTTCCTTC-EEEECSCCCHHHHHHHHHHH
T ss_pred ---------------Hh-CCEEEEEC------------CChHHHHHHHHHHHHhcCCCC-EEEEeCCCCHHHHHHHHHHH
Confidence 12 79999943 211123566778888888755 55677665555545555555
Q ss_pred HH
Q 038592 422 RD 423 (478)
Q Consensus 422 ~~ 423 (478)
.+
T Consensus 120 ~~ 121 (296)
T 3qha_A 120 KA 121 (296)
T ss_dssp GG
T ss_pred HH
Confidence 43
No 417
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.30 E-value=10 Score=39.44 Aligned_cols=39 Identities=26% Similarity=0.485 Sum_probs=30.8
Q ss_pred CeEEEEeCc--hhHHHHHHHhhC-CCEEEEEECChHHHHHHH
Q 038592 264 PKALCVGVG--GGALVSFLRTQL-DFEVVGVEMDEVVLRVAR 302 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~-~~~V~~VEiDp~Vl~vA~ 302 (478)
.+|.|||+| |+.++..|.+.. +.+|+++|++++.++..+
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~ 47 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWN 47 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHT
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHh
Confidence 589999999 555777676653 679999999999877654
No 418
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.21 E-value=3.9 Score=42.77 Aligned_cols=99 Identities=12% Similarity=0.023 Sum_probs=62.6
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCc
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGA 341 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~ 341 (478)
.+|.+||+| |+.++..|.+. +.+|.+++.+++.++...+.++ ++.+. ...|..++++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~~~---~~gi~-~~~s~~e~v~~--------------- 65 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR-GYTVAIYNRTTSKTEEVFKEHQ---DKNLV-FTKTLEEFVGS--------------- 65 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHHTT---TSCEE-ECSSHHHHHHT---------------
T ss_pred CcEEEEeeHHHHHHHHHHHHhC-CCEEEEEcCCHHHHHHHHHhCc---CCCeE-EeCCHHHHHhh---------------
Confidence 489999999 55677766654 5689999999998877665443 12332 23344444421
Q ss_pred ccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 342 CSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
-.+.|+||+-+ |..-...++++.+...|+++- +++++.+..
T Consensus 66 ---------------l~~aDvVilav------------p~~~~v~~vl~~l~~~l~~g~-iiId~s~~~ 106 (474)
T 2iz1_A 66 ---------------LEKPRRIMLMV------------QAGAATDATIKSLLPLLDIGD-ILIDGGNTH 106 (474)
T ss_dssp ---------------BCSSCEEEECC------------CTTHHHHHHHHHHGGGCCTTC-EEEECSCCC
T ss_pred ---------------ccCCCEEEEEc------------cCchHHHHHHHHHHhhCCCCC-EEEECCCCC
Confidence 13479999933 221124567788888888765 455665443
No 419
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.97 E-value=1.1 Score=44.59 Aligned_cols=42 Identities=14% Similarity=-0.003 Sum_probs=31.6
Q ss_pred CCeEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|||.|+ |.|..+..+.+..+.+|.+++.+++-++.++++
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ 206 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKL 206 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc
Confidence 468999984 345555455555678999999999999998654
No 420
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=86.78 E-value=3.3 Score=43.07 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=30.9
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
..+|.|||+| |..++..|.+ +.+|+++|+|++.++..++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~~~v~~l~~ 76 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQAKVDMLNQ 76 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEECSCHHHHHHHHT
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEecCHHHhhHHhc
Confidence 4689999999 4445555554 7899999999999987765
No 421
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=86.45 E-value=4.4 Score=42.73 Aligned_cols=114 Identities=11% Similarity=0.057 Sum_probs=69.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|.+||+| |+.++..|.+. +.+|.+.+.+++.++...+.-. .+.++. ...|..++++.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~g~--~g~~i~-~~~s~~e~v~~-------------- 65 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEA--KGTKVV-GAQSLKEMVSK-------------- 65 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTT--TTSSCE-ECSSHHHHHHT--------------
T ss_pred CCEEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhccc--CCCcee-ccCCHHHHHhh--------------
Confidence 4589999999 55677767654 6799999999998887655311 011221 13454455432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
-..-|+||+=+ |..-...++++.+...|+++- ++++..+........+.+.
T Consensus 66 ----------------l~~aDvVil~V------------p~~~~v~~vl~~l~~~L~~g~-iIId~st~~~~~t~~~~~~ 116 (484)
T 4gwg_A 66 ----------------LKKPRRIILLV------------KAGQAVDDFIEKLVPLLDTGD-IIIDGGNSEYRDTTRRCRD 116 (484)
T ss_dssp ----------------BCSSCEEEECS------------CSSHHHHHHHHHHGGGCCTTC-EEEECSCCCHHHHHHHHHH
T ss_pred ----------------ccCCCEEEEec------------CChHHHHHHHHHHHHhcCCCC-EEEEcCCCCchHHHHHHHH
Confidence 12469999933 221134667888888898755 5567766654333444455
Q ss_pred HHH
Q 038592 421 FRD 423 (478)
Q Consensus 421 l~~ 423 (478)
+.+
T Consensus 117 l~~ 119 (484)
T 4gwg_A 117 LKA 119 (484)
T ss_dssp HHH
T ss_pred HHh
Confidence 554
No 422
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=86.31 E-value=5.1 Score=42.29 Aligned_cols=113 Identities=10% Similarity=0.057 Sum_probs=68.5
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH-hcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ-YFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSF 339 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~-~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~ 339 (478)
..+|.+||+| |+.++..|.+. +.+|++++.+++.++...+ ..+ +..++ ...|..++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~~~~~~l~~~~~~---~~gi~-~~~s~~e~v~~------------- 71 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQSKVDHFLANEAK---GKSII-GATSIEDFISK------------- 71 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSHHHHHHHHTTTT---TSSEE-CCSSHHHHHHT-------------
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHccccc---CCCeE-EeCCHHHHHhc-------------
Confidence 3689999999 55677777654 6789999999998887665 321 11222 12344444321
Q ss_pred CcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHH
Q 038592 340 GACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQ 419 (478)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~ 419 (478)
-.+.|+||+=+ |..-...++++.+...|+++- +++++.+........+.+
T Consensus 72 -----------------l~~aDvVil~V------------p~~~~v~~vl~~l~~~l~~g~-iIId~s~~~~~~~~~l~~ 121 (497)
T 2p4q_A 72 -----------------LKRPRKVMLLV------------KAGAPVDALINQIVPLLEKGD-IIIDGGNSHFPDSNRRYE 121 (497)
T ss_dssp -----------------SCSSCEEEECC------------CSSHHHHHHHHHHGGGCCTTC-EEEECSCCCHHHHHHHHH
T ss_pred -----------------CCCCCEEEEEc------------CChHHHHHHHHHHHHhCCCCC-EEEECCCCChhHHHHHHH
Confidence 12469999943 221134677888888888754 555666554433333444
Q ss_pred HHHH
Q 038592 420 EFRD 423 (478)
Q Consensus 420 ~l~~ 423 (478)
.+.+
T Consensus 122 ~l~~ 125 (497)
T 2p4q_A 122 ELKK 125 (497)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4544
No 423
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=86.28 E-value=5.6 Score=39.51 Aligned_cols=55 Identities=13% Similarity=-0.021 Sum_probs=36.4
Q ss_pred CCeEEEEeCch-hH--HHHHHHhhCCCEEE-EEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 263 RPKALCVGVGG-GA--LVSFLRTQLDFEVV-GVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 263 ~~~VLvIGlGg-G~--L~~~L~~~~~~~V~-~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
+.||.+||+|. |. ....|.+..+++|+ ++|.|++-.+...+.++. ... .|..+.+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~------~~~-~~~~~ll 85 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGG------EPV-EGYPALL 85 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCS------EEE-ESHHHHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCC------CCc-CCHHHHh
Confidence 56999999994 32 45566665577876 569998877755555553 222 6666665
No 424
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.12 E-value=2.8 Score=40.81 Aligned_cols=32 Identities=25% Similarity=0.562 Sum_probs=25.1
Q ss_pred CeEEEEe-Cc--hhHHHHHHHhhCCCEEEEEECChH
Q 038592 264 PKALCVG-VG--GGALVSFLRTQLDFEVVGVEMDEV 296 (478)
Q Consensus 264 ~~VLvIG-lG--gG~L~~~L~~~~~~~V~~VEiDp~ 296 (478)
.+|.||| +| |++++..|.+. +.+|.+++.++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~~ 56 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS-GYPISILDREDW 56 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTCG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCcc
Confidence 5899999 99 67777777653 568999998875
No 425
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=86.03 E-value=1.4 Score=42.03 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=30.0
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.+|.+||+| |..++..|.+ +.+|.+++.+++-.+...+.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~--g~~V~~~~~~~~~~~~~~~~ 42 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR--RFPTLVWNRTFEKALRHQEE 42 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT--TSCEEEECSSTHHHHHHHHH
T ss_pred CeEEEEcccHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHC
Confidence 379999999 4556777765 77899999999877765543
No 426
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=85.90 E-value=3.1 Score=41.47 Aligned_cols=40 Identities=15% Similarity=0.252 Sum_probs=29.5
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.++|.|||+| |..++..+.. ++.+|.+++.++.- +.+.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~~~~~-~~~~~~ 191 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKG-FNMRILYYSRTRKE-EVEREL 191 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCCH-HHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHh-CCCEEEEECCCcch-hhHhhc
Confidence 4689999999 4456665553 57899999999876 555443
No 427
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.75 E-value=3 Score=41.78 Aligned_cols=94 Identities=10% Similarity=0.077 Sum_probs=61.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
..+|||+|++ .|.++..+.+..+.+|.++ .+++-.+.|+++ |.. .-+.....|..+.+++.
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~-~~~~~~~~~~~l-Ga~--~vi~~~~~~~~~~v~~~------------- 227 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRLSGYIPIAT-CSPHNFDLAKSR-GAE--EVFDYRAPNLAQTIRTY------------- 227 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEE-ECGGGHHHHHHT-TCS--EEEETTSTTHHHHHHHH-------------
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc-CCc--EEEECCCchHHHHHHHH-------------
Confidence 4689999984 5777777777788888888 488889998764 532 11111123555555543
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHcc-CcCcEEEE
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLIL-SDFGIFVM 404 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L-~~~Gilv~ 404 (478)
.+..+|++|--+ + ..+.++.+.+.| +++|.++.
T Consensus 228 ---------------t~g~~d~v~d~~--g--------------~~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 228 ---------------TKNNLRYALDCI--T--------------NVESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp ---------------TTTCCCEEEESS--C--------------SHHHHHHHHHHSCTTCEEEEE
T ss_pred ---------------ccCCccEEEECC--C--------------chHHHHHHHHHhhcCCCEEEE
Confidence 233499987511 1 145677888888 58998874
No 428
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.72 E-value=3.2 Score=40.07 Aligned_cols=43 Identities=16% Similarity=0.214 Sum_probs=33.8
Q ss_pred CCeEEEEeC-c-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 263 RPKALCVGV-G-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 263 ~~~VLvIGl-G-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
..+|||+|+ | .|.++..+.+..+.+|.+++.+++-.+.+++ +|
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~g 170 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LG 170 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cC
Confidence 469999997 3 4566666666678899999999999998876 45
No 429
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=85.33 E-value=2.7 Score=41.79 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=27.6
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVAR 302 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~ 302 (478)
.++|.|||+| |..++..+.. ++.+|.+++.++.-.+.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~~~~~~~~~~ 195 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKP-FGVQRFLYTGRQPRPEEAA 195 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG-GTCCEEEEESSSCCHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHH-CCCEEEEECCCCcchhHHH
Confidence 4689999998 4456665553 4789999998876444443
No 430
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.13 E-value=1.7 Score=42.89 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=34.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.++|.+||+| |+.++..+. . +.+|+++|.+++.++.+++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~~~~~~~~~~ 53 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSEKALEAAREQ 53 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCHHHHHHHHHH
Confidence 4799999999 667887777 4 78999999999999988887
No 431
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.12 E-value=8.3 Score=37.38 Aligned_cols=40 Identities=15% Similarity=0.181 Sum_probs=28.3
Q ss_pred CCeEEEEeCch-h-HHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVGG-G-ALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlGg-G-~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
.++|+|||+|. | .++..+. .++.+|.+++.++.-.+.+.+
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~-~~G~~V~~~d~~~~~~~~~~~ 198 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFA-ALGANVKVGARSSAHLARITE 198 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEEcccHHHHHHHHHHH-HCCCEEEEEECCHHHHHHHHH
Confidence 57999999984 3 2344443 457899999999876655544
No 432
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=85.12 E-value=4.3 Score=38.84 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=29.2
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
+|.+||+| |+.++..|.+. +.+|.+++.+++-++...+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~ 41 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFPDACKEFQD 41 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSSTHHHHHHHT
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 68999999 45566666653 5689999999988776654
No 433
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=85.01 E-value=0.94 Score=43.00 Aligned_cols=42 Identities=21% Similarity=0.191 Sum_probs=31.7
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCE-EEEEECChHHHHHHHHhcC
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFE-VVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~-V~~VEiDp~Vl~vA~~~Fg 306 (478)
.+|.+||+| |..++..|.+. +.+ |.+++.+++-++.+.+.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~~~~~~~~~~~~~~g 55 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRK-GFRIVQVYSRTEESARELAQKVE 55 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSHHHHHHHHHHTT
T ss_pred CeEEEEcCCHHHHHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHcC
Confidence 589999998 45566666654 555 8999999998877766655
No 434
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=84.87 E-value=8 Score=36.25 Aligned_cols=44 Identities=20% Similarity=0.175 Sum_probs=26.0
Q ss_pred CCeEEEEeCchh----HHHHHHHhhC---CCEEEEEECChHHHHHHHHhcCCC
Q 038592 263 RPKALCVGVGGG----ALVSFLRTQL---DFEVVGVEMDEVVLRVARQYFGLE 308 (478)
Q Consensus 263 ~~~VLvIGlGgG----~L~~~L~~~~---~~~V~~VEiDp~Vl~vA~~~Fg~~ 308 (478)
.+.|.+.+.-|| +++..|...+ +.+|..||.|+. -. +..+|+..
T Consensus 6 ~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~~-~~-~~~~l~~~ 56 (257)
T 1wcv_1 6 VRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQ-GN-ATSGLGVR 56 (257)
T ss_dssp CCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT-CH-HHHHTTCC
T ss_pred CEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCCC-cC-HHHHhCCC
Confidence 345556544333 2333333332 679999999997 34 44788764
No 435
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.77 E-value=3.6 Score=40.51 Aligned_cols=31 Identities=10% Similarity=0.204 Sum_probs=24.7
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCC-CEEEEEECCh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLD-FEVVGVEMDE 295 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~-~~V~~VEiDp 295 (478)
.+|.+||+| |..++..|.+. + .+|++++.++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 589999999 45566666654 6 7999999998
No 436
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=84.72 E-value=2 Score=42.89 Aligned_cols=41 Identities=20% Similarity=0.150 Sum_probs=30.6
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHH-HHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVV-LRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~V-l~vA~~~ 304 (478)
..+|.|||+| |++++..|... +.+|.+++.++.- .+.|+++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~-G~~V~~~~~~~~~~~~~a~~~ 59 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS-GVDVTVGLRSGSATVAKAEAH 59 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTCHHHHHHHHT
T ss_pred CCEEEEECchHHHHHHHHHHHHC-cCEEEEEECChHHHHHHHHHC
Confidence 3589999999 67788777654 5789999988754 6666553
No 437
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.65 E-value=2.3 Score=42.43 Aligned_cols=42 Identities=31% Similarity=0.336 Sum_probs=30.9
Q ss_pred CCeEEEEeCch-hHHHHHHHhhCCCEEEEEECCh---HHHHHHHHh
Q 038592 263 RPKALCVGVGG-GALVSFLRTQLDFEVVGVEMDE---VVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlGg-G~L~~~L~~~~~~~V~~VEiDp---~Vl~vA~~~ 304 (478)
..+|||+|+|+ |.++..+.+..+.+|.+++.++ +-.+.++++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ 226 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET 226 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh
Confidence 46899999843 4444444545578999999998 778888764
No 438
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=84.55 E-value=4.7 Score=39.17 Aligned_cols=39 Identities=26% Similarity=0.173 Sum_probs=29.2
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEEC--ChHHHHHHHHh
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEM--DEVVLRVARQY 304 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEi--Dp~Vl~vA~~~ 304 (478)
+|.|||+| |+.++..|.+. +.+|++++. +++.++..++.
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r~~~~~~~~~~~~~ 44 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGTEFDTEILKSISAG 44 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECCGGGHHHHHHHHTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEccCCHHHHHHHHHh
Confidence 68999999 44566666554 569999999 98877766543
No 439
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=84.34 E-value=9.7 Score=31.79 Aligned_cols=72 Identities=15% Similarity=0.117 Sum_probs=49.9
Q ss_pred CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEE
Q 038592 286 FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMV 365 (478)
Q Consensus 286 ~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIiv 365 (478)
.+|..||=|+...+.-++.+....+...-....++.+.++.+ ....+|+|++
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l----------------------------~~~~~dlii~ 72 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLL----------------------------EKESVDIAIL 72 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHH----------------------------TTSCCSEEEE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHh----------------------------hccCCCEEEE
Confidence 589999999999998888775322212234567888777664 3456999999
Q ss_pred eCCCCCCCCCCCCCCCCCChHHHHHHHHHcc
Q 038592 366 DLDSGDARNGTSAPPVEFVRKDVLLAARLIL 396 (478)
Q Consensus 366 Dv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L 396 (478)
|+.-++. -..++++.+++.-
T Consensus 73 D~~l~~~-----------~g~~~~~~l~~~~ 92 (150)
T 4e7p_A 73 DVEMPVK-----------TGLEVLEWIRSEK 92 (150)
T ss_dssp CSSCSSS-----------CHHHHHHHHHHTT
T ss_pred eCCCCCC-----------cHHHHHHHHHHhC
Confidence 9754331 3467888888764
No 440
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.33 E-value=1 Score=43.33 Aligned_cols=39 Identities=10% Similarity=0.192 Sum_probs=31.1
Q ss_pred CeEEEEeC-c--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 264 PKALCVGV-G--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 264 ~~VLvIGl-G--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
.+|.+||+ | |+.++..|.+. +.+|++++.+++-++.+.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~~~~~~~~~ 53 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDS-AHHLAAIEIAPEGRDRLQG 53 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHh
Confidence 58999999 8 55677766654 5799999999988877766
No 441
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=84.32 E-value=13 Score=36.84 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=80.3
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.++|.|||+| |..+++.+.. ++.+|.+++.++.. +.+.++ | ++. .|.-+.+++
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~-~G~~V~~~d~~~~~-~~~~~~-g------~~~--~~l~e~l~~-------------- 200 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIP-FGVKLYYWSRHRKV-NVEKEL-K------ARY--MDIDELLEK-------------- 200 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGG-GTCEEEEECSSCCH-HHHHHH-T------EEE--CCHHHHHHH--------------
T ss_pred cCEEEEEccCHHHHHHHHHHHH-CCCEEEEECCCcch-hhhhhc-C------cee--cCHHHHHhh--------------
Confidence 5689999999 4556665553 47899999999876 555443 3 222 244344432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
.|+|++-+.....+ .+++..+.+ ..|+++ +++|+..-..--.+.+.+.
T Consensus 201 -------------------aDiVil~vp~~~~t-------~~~i~~~~~----~~mk~g--ilin~srg~~vd~~aL~~a 248 (333)
T 2d0i_A 201 -------------------SDIVILALPLTRDT-------YHIINEERV----KKLEGK--YLVNIGRGALVDEKAVTEA 248 (333)
T ss_dssp -------------------CSEEEECCCCCTTT-------TTSBCHHHH----HHTBTC--EEEECSCGGGBCHHHHHHH
T ss_pred -------------------CCEEEEcCCCChHH-------HHHhCHHHH----hhCCCC--EEEECCCCcccCHHHHHHH
Confidence 69999955332211 234554443 456776 6789874322212345666
Q ss_pred HHHhcCccEEEee-----------cccc-eEEEEEEcCCCCCCcc---hhhhhhhHHHHHHhccc
Q 038592 421 FRDVFQELYEIDV-----------GNEE-NFVLIATGLSIVSSGS---DCENAFGKKLRLLISGE 470 (478)
Q Consensus 421 l~~vF~~v~~~~v-----------~~~~-N~Vl~a~~~~~~~~~~---~~~~~~~~~l~~~i~~~ 470 (478)
|++-+-....+++ -+.. | ++.|+..-..+.. .....+..++++.+.|.
T Consensus 249 L~~~~i~gaglDv~~~EP~~~~~L~~~~~n--viltPh~~~~t~~~~~~~~~~~~~n~~~~~~g~ 311 (333)
T 2d0i_A 249 IKQGKLKGYATDVFEKEPVREHELFKYEWE--TVLTPHYAGLALEAQEDVGFRAVENLLKVLRGE 311 (333)
T ss_dssp HHTTCBCEEEESCCSSSSCSCCGGGGCTTT--EEECCSCTTCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHcCCceEEEecCCCCCCCCCchHHcCCCC--EEEcCccCCCcHHHHHHHHHHHHHHHHHHHcCC
Confidence 6654322222322 1223 5 3444433222222 23345667888887774
No 442
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=84.00 E-value=5.5 Score=39.20 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=29.3
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
.++|.|||+| |+.+++.+. .++.+|.+++.++.- +.+.+
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~-~~G~~V~~~d~~~~~-~~~~~ 182 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIAN-ALGMNILLYDPYPNE-ERAKE 182 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCH-HHHHH
T ss_pred CceEEEEccCHHHHHHHHHHH-HCCCEEEEECCCCCh-hhHhh
Confidence 5689999999 556776665 368999999998875 44443
No 443
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.97 E-value=10 Score=36.64 Aligned_cols=40 Identities=15% Similarity=0.170 Sum_probs=28.4
Q ss_pred CCeEEEEeCch-hH-HHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVGG-GA-LVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlGg-G~-L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
.++|+|||+|. |. ++..++ .++.+|.+++.++.-.+.+++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~-~~G~~V~~~dr~~~~~~~~~~ 196 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFA-ALGAKVKVGARESDLLARIAE 196 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHH-hCCCEEEEEECCHHHHHHHHH
Confidence 57999999983 33 444343 457899999999876655543
No 444
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=83.92 E-value=7.8 Score=37.94 Aligned_cols=45 Identities=20% Similarity=0.285 Sum_probs=30.8
Q ss_pred CCeEEEEeCch--hHHHHHHH-hhCCCEEE-EEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVGG--GALVSFLR-TQLDFEVV-GVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~-~~~~~~V~-~VEiDp~Vl~vA~~~Fg~ 307 (478)
+.+|.+||+|. ......+. +..+.+++ ++|.+++-.+.+.+.+|.
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~ 56 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGV 56 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCC
T ss_pred cceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCC
Confidence 57999999983 33455565 44567765 569999988655555553
No 445
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=83.81 E-value=4.1 Score=40.15 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=28.8
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCC-------CEEEEEECChH-----HHHHHHH
Q 038592 264 PKALCVGVG--GGALVSFLRTQLD-------FEVVGVEMDEV-----VLRVARQ 303 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~-------~~V~~VEiDp~-----Vl~vA~~ 303 (478)
.+|.|||+| |++++..|.+. + .+|++++.+++ ..+..++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~ 61 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEEDIGGKKLTEIINT 61 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCBSSSSBHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChhhhhhHHHHHHHh
Confidence 489999999 55677666654 3 68999999987 5555443
No 446
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.60 E-value=4.2 Score=39.82 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=25.0
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECCh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDE 295 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp 295 (478)
.+|+|||+| |++++..|.+. +.+|+.++-++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 589999999 56677777654 57999999988
No 447
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.49 E-value=1.1 Score=43.77 Aligned_cols=41 Identities=22% Similarity=0.350 Sum_probs=34.3
Q ss_pred eEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcC
Q 038592 265 KALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFG 306 (478)
Q Consensus 265 ~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg 306 (478)
+|||+|+ |.|.++..+.+..+.+|.+++.+++-.+.+++ +|
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lG 191 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LG 191 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HT
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC
Confidence 4999997 35777777877788899999999999999987 45
No 448
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=83.37 E-value=1.5 Score=44.40 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=28.5
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEE---CChHHHHHHHH
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVE---MDEVVLRVARQ 303 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VE---iDp~Vl~vA~~ 303 (478)
.+|.|||+| |++++..|.+..+.+|++++ .+++.++.+.+
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~ 47 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG 47 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh
Confidence 389999999 45566666442356999999 88887776433
No 449
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=83.22 E-value=1.3 Score=44.10 Aligned_cols=39 Identities=33% Similarity=0.390 Sum_probs=28.8
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
+|.|||+| |++++..|.+. +.+|++++.+++-++..++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~~~~~~l~~~ 57 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNEEEVRLVNEK 57 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc
Confidence 89999999 44566555432 46899999999887766553
No 450
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.07 E-value=5.8 Score=37.89 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=30.5
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.+|+|||+| |+.++..|.+. +.+|++++.+++.++..++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~~~~~~~~~~ 45 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWPAHIEAIRKN 45 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CCcEEEEECCHHHHHHHHhC
Confidence 589999998 44566666543 57999999999888776654
No 451
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=82.93 E-value=5.7 Score=40.65 Aligned_cols=44 Identities=18% Similarity=0.043 Sum_probs=34.9
Q ss_pred CCeEEEEeC-c-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGV-G-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGl-G-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||.|+ | .|.++..+.+..+.+|.++..+++-++.+++ +|.
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~-lGa 266 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LGC 266 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCC
Confidence 568999996 3 4666666777778899999999999999976 453
No 452
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=82.52 E-value=5.9 Score=38.41 Aligned_cols=40 Identities=23% Similarity=0.150 Sum_probs=29.9
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
..+|.+||+| |..++..|.+. +.+|.+++.+++-++...+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~~~~~~~~~ 71 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTAEKCDLFIQ 71 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSGGGGHHHHH
T ss_pred CCeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHH
Confidence 3689999999 44566666553 5689999999987776555
No 453
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=82.40 E-value=11 Score=36.96 Aligned_cols=108 Identities=14% Similarity=0.133 Sum_probs=64.2
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhC---CCEEEEEECChH--HHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQL---DFEVVGVEMDEV--VLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKN 335 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~---~~~V~~VEiDp~--Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~ 335 (478)
..+|.+||+| |++++..|.+.- ..+|++++.+++ -++..+++ | +++ ..|..+.++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~-G------~~~-~~~~~e~~~---------- 83 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM-G------VKL-TPHNKETVQ---------- 83 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH-T------CEE-ESCHHHHHH----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc-C------CEE-eCChHHHhc----------
Confidence 3589999999 667777776542 158999999985 55544443 3 232 234433332
Q ss_pred CCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHH
Q 038592 336 PDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYD 415 (478)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~ 415 (478)
..|+||+-+ ||. ...+.+..+...|+++.+++ ++.+.-. ..
T Consensus 84 -----------------------~aDvVilav-----------~~~--~~~~vl~~l~~~l~~~~ivv-s~s~gi~--~~ 124 (322)
T 2izz_A 84 -----------------------HSDVLFLAV-----------KPH--IIPFILDEIGADIEDRHIVV-SCAAGVT--IS 124 (322)
T ss_dssp -----------------------HCSEEEECS-----------CGG--GHHHHHHHHGGGCCTTCEEE-ECCTTCC--HH
T ss_pred -----------------------cCCEEEEEe-----------CHH--HHHHHHHHHHhhcCCCCEEE-EeCCCCC--HH
Confidence 279999933 222 44678888888888766544 4433211 12
Q ss_pred HHHHHHHHhcCc
Q 038592 416 MLIQEFRDVFQE 427 (478)
Q Consensus 416 ~v~~~l~~vF~~ 427 (478)
.+-+.+.+.|+.
T Consensus 125 ~l~~~l~~~~~~ 136 (322)
T 2izz_A 125 SIEKKLSAFRPA 136 (322)
T ss_dssp HHHHHHHTTSSC
T ss_pred HHHHHHhhcCCC
Confidence 334445555654
No 454
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=82.18 E-value=3.3 Score=45.86 Aligned_cols=40 Identities=23% Similarity=0.334 Sum_probs=31.5
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
.+|.|||+| |+.++..+.+. +.+|+++|++++.++.++++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~~~~~~~~~~ 354 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILS-NYPVILKEVNEKFLEAGIGR 354 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-TCCEEEECSSHHHHHHHHHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCHHHHHHHHHH
Confidence 579999999 45566666543 67999999999998877654
No 455
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=82.01 E-value=1.2 Score=43.08 Aligned_cols=40 Identities=25% Similarity=0.307 Sum_probs=29.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhC----C-CEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQL----D-FEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~----~-~~V~~VEiDp~Vl~vA~~ 303 (478)
+.+|++||+| |+.++..|.+.. + .+|++++. ++.++..++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~ 54 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRA 54 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHh
Confidence 4589999999 566777776642 4 68999998 665555544
No 456
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=81.86 E-value=6.6 Score=41.13 Aligned_cols=33 Identities=21% Similarity=0.206 Sum_probs=27.2
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEV 296 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~ 296 (478)
..+|.|||+| |++++..+.+. +.+|+++|++++
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 3689999999 56677766654 789999999998
No 457
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=81.80 E-value=7 Score=40.78 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=29.7
Q ss_pred CCeEEEEeCchhH--HHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVGGGA--LVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlGgG~--L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
..+|.|||+|-=+ ++..+.+ .+.+|+++|+|++.++.-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~-~G~~V~g~Did~~kV~~ln~ 62 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFAL-LGHRVVGYDVNPSIVERLRA 62 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSCHHHHHHHHT
T ss_pred CCEEEEEccCHHHHHHHHHHHh-CCCcEEEEECCHHHHHHHHC
Confidence 5799999999433 3433433 26899999999999887654
No 458
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=81.78 E-value=3.7 Score=40.98 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=42.9
Q ss_pred CCeEEEEeCchhHHHHHHHhh-CCCE-E-EEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHH
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-LDFE-V-VGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEF 323 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~~~~-V-~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~ 323 (478)
+.+++.+-+|.|++..-+.+. ++.+ | .++|+|+...+..+..|+-. ++.+|..++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------~~~~DI~~~ 67 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------VQVKNLDSI 67 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------CBCCCTTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------cccCChhhc
Confidence 568999999999999888775 2344 5 69999999999999988632 456676655
No 459
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.60 E-value=5 Score=32.12 Aligned_cols=51 Identities=25% Similarity=0.307 Sum_probs=33.2
Q ss_pred CCeEEEEeCch-h-HHHHHHHhhCC-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHH
Q 038592 263 RPKALCVGVGG-G-ALVSFLRTQLD-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAI 321 (478)
Q Consensus 263 ~~~VLvIGlGg-G-~L~~~L~~~~~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~ 321 (478)
..+|+|+|+|. | .++..|.+. + .+|.+++.++.-++.... ..+.++..|..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~ 58 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTS-SNYSVTVADHDLAALAVLNR-------MGVATKQVDAK 58 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCHHHHHHHHT-------TTCEEEECCTT
T ss_pred cCeEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHh-------CCCcEEEecCC
Confidence 35899999952 2 234444443 5 799999999988776651 23556666554
No 460
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=81.48 E-value=2.9 Score=36.03 Aligned_cols=93 Identities=16% Similarity=0.078 Sum_probs=51.6
Q ss_pred chhHHHHHHHhhC--CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCc
Q 038592 272 GGGALVSFLRTQL--DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNF 349 (478)
Q Consensus 272 GgG~L~~~L~~~~--~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (478)
|.++...+..+.. ..+|..||=|+...+.-++.+.-..+..+-....|+.+.++.+..
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~-------------------- 69 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIE-------------------- 69 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHH--------------------
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhcc--------------------
Confidence 4455555665553 369999999999999888877532111122247788887766432
Q ss_pred cCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 350 LDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 350 ~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
..+|+||+|+.-++. -..++++.+++.-. --++++
T Consensus 70 --------~~~dlvilD~~l~~~-----------~g~~l~~~lr~~~~-~~ii~~ 104 (164)
T 3t8y_A 70 --------LKPDVITMDIEMPNL-----------NGIEALKLIMKKAP-TRVIMV 104 (164)
T ss_dssp --------HCCSEEEECSSCSSS-----------CHHHHHHHHHHHSC-CEEEEE
T ss_pred --------CCCCEEEEeCCCCCC-----------CHHHHHHHHHhcCC-ceEEEE
Confidence 359999999754331 34677887776543 334443
No 461
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=81.05 E-value=17 Score=37.93 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=61.2
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH-hcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ-YFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~-~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.+|.|||+| |+.++..|.+. +.+|.+++.+++.++...+ ... +..+. ...|..+.++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~~~~~~l~~~~~~---g~gi~-~~~~~~e~v~~-------------- 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH-GFVVCAFNRTVSKVDDFLANEAK---GTKVL-GAHSLEEMVSK-------------- 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSTHHHHHHHHTTTT---TSSCE-ECSSHHHHHHH--------------
T ss_pred CeEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcccc---CCCeE-EeCCHHHHHhh--------------
Confidence 479999999 55677766654 5689999999988876655 210 12232 23344444432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCC
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPN 410 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~ 410 (478)
-...|+||+-+ |..-...++++.+...|+++- +++++.+..
T Consensus 64 ----------------l~~aDvVilaV------------p~~~~v~~vl~~l~~~l~~g~-iII~~s~~~ 104 (482)
T 2pgd_A 64 ----------------LKKPRRIILLV------------KAGQAVDNFIEKLVPLLDIGD-IIIDGGNSE 104 (482)
T ss_dssp ----------------BCSSCEEEECS------------CTTHHHHHHHHHHHHHCCTTC-EEEECSCCC
T ss_pred ----------------ccCCCEEEEeC------------CChHHHHHHHHHHHhhcCCCC-EEEECCCCC
Confidence 12479999933 221134667888888898765 455665443
No 462
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=80.98 E-value=8 Score=39.80 Aligned_cols=44 Identities=16% Similarity=0.139 Sum_probs=35.4
Q ss_pred CCeEEEEeC-c-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGV-G-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGl-G-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+|+ | .|.++..+.+..+.+|.++..+++-++.|+++ |.
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~l-Ga 274 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAM-GA 274 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-TC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhh-CC
Confidence 468999997 3 46677777777789999999999999999774 53
No 463
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=80.80 E-value=8.6 Score=38.00 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=26.9
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEEC-ChHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEM-DEVV 297 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEi-Dp~V 297 (478)
.++|.|||+| |+.+++.+. .++.+|.+++. ++.-
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~-~~G~~V~~~d~~~~~~ 182 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQ-GFDMDIDYFDTHRASS 182 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSCCCH
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCEEEEECCCCcCh
Confidence 5689999999 566777665 45789999999 7765
No 464
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=80.76 E-value=7.4 Score=38.38 Aligned_cols=105 Identities=13% Similarity=0.183 Sum_probs=61.9
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.++|.|||+| |+.+++.+.. ++.+|.+++.++.-.. +. .+|. +. .+..+.+++
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~-~G~~V~~~d~~~~~~~-~~-~~g~------~~--~~l~ell~~-------------- 196 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANA-MGMKVLAYDILDIREK-AE-KINA------KA--VSLEELLKN-------------- 196 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHH-TTCEEEEECSSCCHHH-HH-HTTC------EE--CCHHHHHHH--------------
T ss_pred CCEEEEEeeCHHHHHHHHHHHH-CCCEEEEECCCcchhH-HH-hcCc------ee--cCHHHHHhh--------------
Confidence 5789999999 5567766653 5889999999887543 33 3342 21 244444432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
-|+|++-+.....+ .++++.+.+ ..|+++ .+++|+..-..--.+.+.+.
T Consensus 197 -------------------aDvVvl~~P~~~~t-------~~li~~~~l----~~mk~g-a~lIn~arg~~vd~~aL~~a 245 (313)
T 2ekl_A 197 -------------------SDVISLHVTVSKDA-------KPIIDYPQF----ELMKDN-VIIVNTSRAVAVNGKALLDY 245 (313)
T ss_dssp -------------------CSEEEECCCCCTTS-------CCSBCHHHH----HHSCTT-EEEEESSCGGGBCHHHHHHH
T ss_pred -------------------CCEEEEeccCChHH-------HHhhCHHHH----hcCCCC-CEEEECCCCcccCHHHHHHH
Confidence 69999955432221 234555444 457775 56678865422223445666
Q ss_pred HHH
Q 038592 421 FRD 423 (478)
Q Consensus 421 l~~ 423 (478)
|++
T Consensus 246 L~~ 248 (313)
T 2ekl_A 246 IKK 248 (313)
T ss_dssp HHT
T ss_pred HHc
Confidence 664
No 465
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=80.43 E-value=7.9 Score=38.64 Aligned_cols=128 Identities=15% Similarity=0.101 Sum_probs=77.9
Q ss_pred CCeEEEEeCchhHHHHHHHhh-CCC-EEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVGGGALVSFLRTQ-LDF-EVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~-~~~-~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
+.+++.+-+|.|++..-+.+. ++. .|.++|+|+...+.-+..|+- ..++.+|..++..+..
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~-----~~~~~~DI~~~~~~~~------------ 65 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE-----TNLLNRNIQQLTPQVI------------ 65 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----SCEECCCGGGCCHHHH------------
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC-----CceeccccccCCHHHh------------
Confidence 458999999999988888765 233 578999999999999998862 3466788776643211
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCC-----CCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCC-CchHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDAR-----NGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPP-NRSFY 414 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~-----~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~-~~~~~ 414 (478)
....+|+|+......+-+ .+...+ ..-+-.++++.++..-+|.=+++=||..- +....
T Consensus 66 ---------------~~~~~D~l~ggpPCQ~fS~ag~~~~~~d~-r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~~~~ 129 (333)
T 4h0n_A 66 ---------------KKWNVDTILMSPPCQPFTRNGKYLDDNDP-RTNSFLYLIGILDQLDNVDYILMENVKGFENSTVR 129 (333)
T ss_dssp ---------------HHTTCCEEEECCCCCCSEETTEECCTTCT-TSCCHHHHHHHGGGCTTCCEEEEEECTTGGGSHHH
T ss_pred ---------------ccCCCCEEEecCCCcchhhhhhccCCcCc-ccccHHHHHHHHHHhcCCCEEEEecchhhhhhhHH
Confidence 112588888754332211 111111 11223456655543323866666699764 33445
Q ss_pred HHHHHHHHH
Q 038592 415 DMLIQEFRD 423 (478)
Q Consensus 415 ~~v~~~l~~ 423 (478)
+.+++.|.+
T Consensus 130 ~~i~~~l~~ 138 (333)
T 4h0n_A 130 NLFIDKLKE 138 (333)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 566666654
No 466
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=80.21 E-value=9.9 Score=37.09 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=37.5
Q ss_pred CCeEEEEeCch--hHHHHHHHhhCCCEEE-EEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 263 RPKALCVGVGG--GALVSFLRTQLDFEVV-GVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~~~~V~-~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
+.+|.+||+|. ......+.+..+.+++ ++|.+++-.+...+.++. . ..|..+.+
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~------~--~~~~~~~l 59 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGC------E--VRTIDAIE 59 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC------E--ECCHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCC------C--cCCHHHHh
Confidence 35899999984 3455566666677877 589999987766565553 2 56766665
No 467
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=80.15 E-value=4.9 Score=39.40 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=31.3
Q ss_pred CCCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 262 FRPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 262 ~~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..++|-+||+| |..++.-|.+. +.+|++.+.+++-.+...+.
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~-G~~v~v~dr~~~~~~~l~~~ 45 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQSAVDGLVAA 45 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSSHHHHHHHHHT
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC-CCeEEEEcCCHHHHHHHHHc
Confidence 36799999999 34455555543 67999999999988876553
No 468
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=79.98 E-value=8.3 Score=31.21 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=49.5
Q ss_pred CEEEEEECChHHHHHHHHhcCCCCCCCeEE--EEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEE
Q 038592 286 FEVVGVEMDEVVLRVARQYFGLEDGEFLQV--SVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVI 363 (478)
Q Consensus 286 ~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v--~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvI 363 (478)
.+|..||=|+...+.-++++... +..++ ...|+.+.++.+. ..++|+|
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~a~~~~~----------------------------~~~~dlv 52 (130)
T 1dz3_A 3 IKVCIADDNRELVSLLDEYISSQ--PDMEVIGTAYNGQDCLQMLE----------------------------EKRPDIL 52 (130)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTS--TTEEEEEEESSHHHHHHHHH----------------------------HHCCSEE
T ss_pred eEEEEEcCCHHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHh----------------------------cCCCCEE
Confidence 47889999999998888877532 23443 4678877776542 2358999
Q ss_pred EEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCc
Q 038592 364 MVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFG 400 (478)
Q Consensus 364 ivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~G 400 (478)
++|+.-++. -..++++.+++...+.-
T Consensus 53 llD~~l~~~-----------~g~~~~~~l~~~~~~~~ 78 (130)
T 1dz3_A 53 LLDIIMPHL-----------DGLAVLERIRAGFEHQP 78 (130)
T ss_dssp EEESCCSSS-----------CHHHHHHHHHHHCSSCC
T ss_pred EEecCCCCC-----------CHHHHHHHHHhcCCCCC
Confidence 999864321 23678888887544443
No 469
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=79.87 E-value=3 Score=39.91 Aligned_cols=39 Identities=15% Similarity=0.077 Sum_probs=27.7
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
+.+|.+||+| |..++..|.+. +.+|++++ +++-++...+
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~-~~~~~~~~~~ 43 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA-GHQLHVTT-IGPVADELLS 43 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT-TCEEEECC-SSCCCHHHHT
T ss_pred CCEEEEEccCHHHHHHHHHHHhC-CCEEEEEc-CHHHHHHHHH
Confidence 4589999999 44566666553 67899999 8876665544
No 470
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.73 E-value=6 Score=38.56 Aligned_cols=31 Identities=19% Similarity=0.154 Sum_probs=24.3
Q ss_pred CeEEEEeCc--hhHHHHHHHhhCCCEEEEEECCh
Q 038592 264 PKALCVGVG--GGALVSFLRTQLDFEVVGVEMDE 295 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp 295 (478)
.+|+|||+| |++++..|.+. +.+|+.++-++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 489999999 56677777654 56899999987
No 471
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=79.09 E-value=13 Score=36.66 Aligned_cols=55 Identities=9% Similarity=0.049 Sum_probs=35.7
Q ss_pred CCeEEEEeCch--hHHHHHHHhhCCCEEE-EEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 263 RPKALCVGVGG--GALVSFLRTQLDFEVV-GVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~~~~V~-~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
+.+|.+||+|. ......+.+..+.+++ ++|.+++-.+...+.++... ..|..+.+
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~-------~~~~~~~l 62 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG-------DATMEALL 62 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC-------CSSHHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC-------cCCHHHHh
Confidence 46999999994 3344455544467766 56999998776555556431 35666655
No 472
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=78.99 E-value=4.6 Score=39.60 Aligned_cols=150 Identities=14% Similarity=0.076 Sum_probs=80.8
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.++|.|||+| |+.+++.+.. ++.+|.+++.++.-.+. .+ ...+.-+.+++
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~-~G~~V~~~dr~~~~~~~------------~~-~~~~l~ell~~-------------- 173 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKA-FGMRVIAYTRSSVDQNV------------DV-ISESPADLFRQ-------------- 173 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSCCCTTC------------SE-ECSSHHHHHHH--------------
T ss_pred cchheeeccCchhHHHHHHHHh-hCcEEEEEecccccccc------------cc-ccCChHHHhhc--------------
Confidence 4689999999 5567766654 58899999987632111 11 22344445433
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
.|+|++-+...+.+ ..++..+ ....|+++. +++|+..-..--.+.+++.
T Consensus 174 -------------------aDiV~l~~P~t~~t-------~~li~~~----~l~~mk~ga-ilIN~aRG~~vd~~aL~~a 222 (290)
T 3gvx_A 174 -------------------SDFVLIAIPLTDKT-------RGMVNSR----LLANARKNL-TIVNVARADVVSKPDMIGF 222 (290)
T ss_dssp -------------------CSEEEECCCCCTTT-------TTCBSHH----HHTTCCTTC-EEEECSCGGGBCHHHHHHH
T ss_pred -------------------cCeEEEEeeccccc-------hhhhhHH----HHhhhhcCc-eEEEeehhcccCCcchhhh
Confidence 69999965433222 2344443 446677765 5568865433234456677
Q ss_pred HHHhcCccEEEee---------cccceEEEEEEcCC----CCCCcchhhhhhhHHHHHHhcccccc
Q 038592 421 FRDVFQELYEIDV---------GNEENFVLIATGLS----IVSSGSDCENAFGKKLRLLISGEYMD 473 (478)
Q Consensus 421 l~~vF~~v~~~~v---------~~~~N~Vl~a~~~~----~~~~~~~~~~~~~~~l~~~i~~~~~~ 473 (478)
|++---.-..+++ -...| ++.|+.- .........+.+..++++++.|..+-
T Consensus 223 L~~g~i~ga~lDV~~~EP~~pL~~~~n--vilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~~~ 286 (290)
T 3gvx_A 223 LKERSDVWYLSDVWWNEPEITETNLRN--AILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEGHH 286 (290)
T ss_dssp HHHCTTCEEEESCCTTTTSCCSCCCSS--EEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC-----
T ss_pred hhhccceEEeeccccCCcccchhhhhh--hhcCccccCCccchHHHHHHHHHHHHHHhhhcCCCcc
Confidence 7652111122222 22346 3444431 12334445566778899988887653
No 473
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=78.93 E-value=14 Score=30.62 Aligned_cols=72 Identities=7% Similarity=0.001 Sum_probs=49.2
Q ss_pred CEEEEEECChHHHHHHHHhcCCC-CCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEE
Q 038592 286 FEVVGVEMDEVVLRVARQYFGLE-DGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIM 364 (478)
Q Consensus 286 ~~V~~VEiDp~Vl~vA~~~Fg~~-~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi 364 (478)
.+|..||=|+...+..+..+... .+-.+.....++.+.++.+ ....+|+|+
T Consensus 3 ~~ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~al~~~----------------------------~~~~~dlvl 54 (141)
T 3cu5_A 3 LRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIA----------------------------LKHPPNVLL 54 (141)
T ss_dssp CEEEEECSCHHHHHHHHHHCCGGGSCCSEEEEESSHHHHHHHH----------------------------TTSCCSEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHHccCCcEEeeecccHHHHHHHH----------------------------hcCCCCEEE
Confidence 47899999999998888877531 1222333688888887653 234699999
Q ss_pred EeCCCCCCCCCCCCCCCCCChHHHHHHHHHcc
Q 038592 365 VDLDSGDARNGTSAPPVEFVRKDVLLAARLIL 396 (478)
Q Consensus 365 vDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L 396 (478)
+|+.-++. -..++++.+++..
T Consensus 55 lD~~lp~~-----------~g~~l~~~l~~~~ 75 (141)
T 3cu5_A 55 TDVRMPRM-----------DGIELVDNILKLY 75 (141)
T ss_dssp EESCCSSS-----------CHHHHHHHHHHHC
T ss_pred EeCCCCCC-----------CHHHHHHHHHhhC
Confidence 99854321 2367888887753
No 474
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=78.66 E-value=2.2 Score=41.66 Aligned_cols=42 Identities=19% Similarity=0.234 Sum_probs=33.5
Q ss_pred eEEEEeC--chhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 265 KALCVGV--GGGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 265 ~VLvIGl--GgG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
+|||+|+ |.|.++..+.+..+.+|.+++.+++-++.+++ +|.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa 195 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGA 195 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTC
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCC
Confidence 7999997 35666666777778899999999988898876 563
No 475
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=78.66 E-value=7.6 Score=38.75 Aligned_cols=128 Identities=9% Similarity=0.104 Sum_probs=74.8
Q ss_pred CCeEEEEeCchhHHHHHHHhhCCCEEEEEECC-hHHHHHHHHhcCCC---------------------CCCCeEEEEchH
Q 038592 263 RPKALCVGVGGGALVSFLRTQLDFEVVGVEMD-EVVLRVARQYFGLE---------------------DGEFLQVSVGDA 320 (478)
Q Consensus 263 ~~~VLvIGlGgG~L~~~L~~~~~~~V~~VEiD-p~Vl~vA~~~Fg~~---------------------~d~rl~v~v~Dg 320 (478)
...|+.+|+|-.+.+--|.... ..+..+|+| |+|++.-++.+.-. ..++.+++-.|.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL 176 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDL 176 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHC-TTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCT
T ss_pred CcEEEEeCCCCccHHHHhcCcC-CCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCC
Confidence 4689999999999886666542 256677777 99999877765311 136789998998
Q ss_pred HH--HHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCc
Q 038592 321 IE--FLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSD 398 (478)
Q Consensus 321 ~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~ 398 (478)
.+ |+.++.... + ......+++.-. .-++-+|. ....+++.+.+.+ +
T Consensus 177 ~d~~w~~~ll~~~----------------------~-d~~~Ptl~iaEg------vL~YL~~~--~~~~ll~~ia~~~-~ 224 (334)
T 1rjd_A 177 NDITETTRLLDVC----------------------T-KREIPTIVISEC------LLCYMHNN--ESQLLINTIMSKF-S 224 (334)
T ss_dssp TCHHHHHHHHHTT----------------------C-CTTSCEEEEEES------CGGGSCHH--HHHHHHHHHHHHC-S
T ss_pred CCcHHHHHHHHhc----------------------C-CCCCCEEEEEcc------hhhCCCHH--HHHHHHHHHHhhC-C
Confidence 75 554432210 0 123455666521 01222222 2355666666666 6
Q ss_pred CcEEE-EEeCCC---CchHHHHHHHHHHH
Q 038592 399 FGIFV-MNVIPP---NRSFYDMLIQEFRD 423 (478)
Q Consensus 399 ~Gilv-~N~~~~---~~~~~~~v~~~l~~ 423 (478)
+|.++ +....+ +..+-+.+...+++
T Consensus 225 ~~~~v~~e~i~~~~~~~~fg~~m~~~l~~ 253 (334)
T 1rjd_A 225 HGLWISYDPIGGSQPNDRFGAIMQSNLKE 253 (334)
T ss_dssp SEEEEEEEECCCCSTTCCHHHHHHHHHHH
T ss_pred CcEEEEEeccCCCCCcchHHHHHHHHhhc
Confidence 67664 555555 44554555666655
No 476
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=78.47 E-value=7.7 Score=38.60 Aligned_cols=57 Identities=25% Similarity=0.232 Sum_probs=36.9
Q ss_pred CCeEEEEeCch-h-HHHHHHH-hhCCCEEE-EEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 263 RPKALCVGVGG-G-ALVSFLR-TQLDFEVV-GVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 263 ~~~VLvIGlGg-G-~L~~~L~-~~~~~~V~-~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
+.||.+||+|. | .....+. +..+++++ ++|.|++-.+.+.+-++.. . -...|..+.+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~----~-~~~~~~~~ll 83 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIE----A-KDYNDYHDLI 83 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCC----C-EEESSHHHHH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCC----C-eeeCCHHHHh
Confidence 56999999995 3 3445555 34567876 5899998877655555531 1 2346666665
No 477
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=78.09 E-value=9.1 Score=37.42 Aligned_cols=56 Identities=13% Similarity=0.032 Sum_probs=33.3
Q ss_pred CCeEEEEeCch--hHHHHHHHhhCCCEEEE-EECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 263 RPKALCVGVGG--GALVSFLRTQLDFEVVG-VEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~~~~V~~-VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
+.||.+||+|. ......+.+..+.++++ ++.+++-.+...+.++.+ -...|..+.+
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~------~~~~~~~~ll 63 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLP------KAYDKLEDML 63 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCS------CEESCHHHHH
T ss_pred ceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCC------cccCCHHHHh
Confidence 46999999993 34555566656677775 588887655443444432 1345665555
No 478
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=78.04 E-value=9.6 Score=38.35 Aligned_cols=107 Identities=18% Similarity=0.262 Sum_probs=62.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.++|.|||+| |..+++.+. .++++|.+++.++.-.+.+++. |. + .+.+.-+.+
T Consensus 164 gktvGIIG~G~IG~~vA~~l~-~~G~~V~~~dr~~~~~~~~~~~-g~------~-~~~~l~ell---------------- 218 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLK-PFGCNLLYHDRLQMAPELEKET-GA------K-FVEDLNEML---------------- 218 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHG-GGCCEEEEECSSCCCHHHHHHH-CC------E-ECSCHHHHG----------------
T ss_pred CCEEeEEEeCHHHHHHHHHHH-HCCCEEEEeCCCccCHHHHHhC-CC------e-EcCCHHHHH----------------
Confidence 5799999999 455666555 4588999999887545555443 32 1 112333332
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
...|+|++-+...+.+ .++++.+.|. .|++ |.+++|+..-..---+.+++.
T Consensus 219 -----------------~~aDvV~l~~Plt~~t-------~~li~~~~l~----~mk~-gailIN~aRG~~vde~aL~~a 269 (351)
T 3jtm_A 219 -----------------PKCDVIVINMPLTEKT-------RGMFNKELIG----KLKK-GVLIVNNARGAIMERQAVVDA 269 (351)
T ss_dssp -----------------GGCSEEEECSCCCTTT-------TTCBSHHHHH----HSCT-TEEEEECSCGGGBCHHHHHHH
T ss_pred -----------------hcCCEEEECCCCCHHH-------HHhhcHHHHh----cCCC-CCEEEECcCchhhCHHHHHHH
Confidence 2369999965433221 3456666654 4666 556678865422223445666
Q ss_pred HHH
Q 038592 421 FRD 423 (478)
Q Consensus 421 l~~ 423 (478)
|++
T Consensus 270 L~~ 272 (351)
T 3jtm_A 270 VES 272 (351)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 479
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=78.03 E-value=11 Score=31.56 Aligned_cols=78 Identities=15% Similarity=0.089 Sum_probs=52.6
Q ss_pred CEEEEEECChHHHHHHHHhcCCCCCCCeEE--EEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEE
Q 038592 286 FEVVGVEMDEVVLRVARQYFGLEDGEFLQV--SVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVI 363 (478)
Q Consensus 286 ~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v--~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvI 363 (478)
.+|..||=|+...+.-++.+.-. ....+ ...++.+.++.+. ...+|+|
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~--~~~~v~~~~~~~~~a~~~l~----------------------------~~~~dli 55 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIERR--PGYAVVAEAADAGEAYRLYR----------------------------ETTPDIV 55 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTS--TTEEEEEEESSHHHHHHHHH----------------------------TTCCSEE
T ss_pred cEEEEECCcHHHHHHHHHHHhhC--CCcEEEEEeCCHHHHHHHHh----------------------------cCCCCEE
Confidence 58999999999999888887531 23444 5778877776542 3459999
Q ss_pred EEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEE
Q 038592 364 MVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVM 404 (478)
Q Consensus 364 ivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~ 404 (478)
++|+.-++. -..++++.+++.-..--++++
T Consensus 56 i~D~~l~~~-----------~g~~~~~~l~~~~~~~~ii~l 85 (153)
T 3cz5_A 56 VMDLTLPGP-----------GGIEATRHIRQWDGAARILIF 85 (153)
T ss_dssp EECSCCSSS-----------CHHHHHHHHHHHCTTCCEEEE
T ss_pred EEecCCCCC-----------CHHHHHHHHHHhCCCCeEEEE
Confidence 999764321 236788888887443334443
No 480
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=77.94 E-value=1.2 Score=45.19 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=21.3
Q ss_pred HHHHHHHHHccCcCcEEEEEeCCC
Q 038592 386 KDVLLAARLILSDFGIFVMNVIPP 409 (478)
Q Consensus 386 ~efl~~~~~~L~~~Gilv~N~~~~ 409 (478)
..||+..++.|+|||.+++.+.++
T Consensus 189 ~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 189 ALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp HHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCceEEEEEecC
Confidence 457899999999999999998877
No 481
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=77.92 E-value=6.8 Score=39.18 Aligned_cols=34 Identities=12% Similarity=0.231 Sum_probs=26.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVV 297 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~V 297 (478)
.++|.|||+| |+.+++.+. .++.+|.+++.++.-
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~-~~G~~V~~~d~~~~~ 200 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQ-SFGMKTIGYDPIISP 200 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSSCH
T ss_pred cCEEEEEeECHHHHHHHHHHH-HCCCEEEEECCCcch
Confidence 5789999999 556676665 468999999987654
No 482
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=77.79 E-value=7.4 Score=37.83 Aligned_cols=43 Identities=19% Similarity=0.141 Sum_probs=31.7
Q ss_pred CCeEEEEe-Cc-hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVG-VG-GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIG-lG-gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
..+|||+| .| .|.++..+.+..+.+|.++.-++. .+.+++ +|.
T Consensus 153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~~~-lGa 197 (321)
T 3tqh_A 153 GDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFLKA-LGA 197 (321)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHHHH-HTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHHHH-cCC
Confidence 46899997 34 477777777777889999875544 888877 454
No 483
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=77.72 E-value=11 Score=35.29 Aligned_cols=39 Identities=28% Similarity=0.333 Sum_probs=27.2
Q ss_pred eEEEEeCc--hhHHHHHHHhhCCCEEEEEEC--ChHHHHHHHHh
Q 038592 265 KALCVGVG--GGALVSFLRTQLDFEVVGVEM--DEVVLRVARQY 304 (478)
Q Consensus 265 ~VLvIGlG--gG~L~~~L~~~~~~~V~~VEi--Dp~Vl~vA~~~ 304 (478)
+|.+||+| |+.++..|.+. +.+|++++. +++.++...+.
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~-g~~V~~~~~~~~~~~~~~~~~~ 44 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSR-GVEVVTSLEGRSPSTIERARTV 44 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEECCTTCCHHHHHHHHHH
T ss_pred eEEEEechHHHHHHHHHHHHC-CCeEEEeCCccCHHHHHHHHHC
Confidence 68999999 55566666653 568888877 66666655443
No 484
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=77.68 E-value=19 Score=31.76 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=21.8
Q ss_pred CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchH
Q 038592 285 DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDA 320 (478)
Q Consensus 285 ~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg 320 (478)
+.+|..||.||.-- ...|++.. ...+.++..+.
T Consensus 30 g~~vlliD~D~~~~--~~~~~~~~-~~~~~~~~~~~ 62 (206)
T 4dzz_A 30 GYNIAVVDTDPQMS--LTNWSKAG-KAAFDVFTAAS 62 (206)
T ss_dssp TCCEEEEECCTTCH--HHHHHTTS-CCSSEEEECCS
T ss_pred CCeEEEEECCCCCC--HHHHHhcC-CCCCcEEecCc
Confidence 67999999998642 33566543 33477777655
No 485
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=77.66 E-value=10 Score=37.74 Aligned_cols=106 Identities=14% Similarity=0.179 Sum_probs=61.0
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.++|.|||+| |+.+++.++ .++.+|.+++.++.-.+.+..+ |. ...+.-+.+++
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~-~~G~~V~~~d~~~~~~~~~~~~-g~--------~~~~l~ell~~-------------- 200 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQ-GWGATLQYHEAKALDTQTEQRL-GL--------RQVACSELFAS-------------- 200 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTT-TSCCEEEEECSSCCCHHHHHHH-TE--------EECCHHHHHHH--------------
T ss_pred CCEEEEEeeCHHHHHHHHHHH-HCCCEEEEECCCCCcHhHHHhc-Cc--------eeCCHHHHHhh--------------
Confidence 4799999999 445555443 4588999999987434444443 31 12244444432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
-|+|++=+.....+ .++++.+ ....|++ |.+++|+..-..---+.+++.
T Consensus 201 -------------------aDvV~l~~P~t~~t-------~~li~~~----~l~~mk~-gailIN~arg~~vd~~aL~~a 249 (330)
T 4e5n_A 201 -------------------SDFILLALPLNADT-------LHLVNAE----LLALVRP-GALLVNPCRGSVVDEAAVLAA 249 (330)
T ss_dssp -------------------CSEEEECCCCSTTT-------TTCBCHH----HHTTSCT-TEEEEECSCGGGBCHHHHHHH
T ss_pred -------------------CCEEEEcCCCCHHH-------HHHhCHH----HHhhCCC-CcEEEECCCCchhCHHHHHHH
Confidence 69999955332221 2345544 4456676 556668865422223445666
Q ss_pred HHH
Q 038592 421 FRD 423 (478)
Q Consensus 421 l~~ 423 (478)
|++
T Consensus 250 L~~ 252 (330)
T 4e5n_A 250 LER 252 (330)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 486
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=77.44 E-value=16 Score=36.36 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=27.7
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHH
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVL 298 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl 298 (478)
.++|.|||+| |+.+++.+. .++.+|.+++.++.-.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~-~~G~~V~~~d~~~~~~ 177 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGL-AFGMKVLCYDVVKRED 177 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCHH
T ss_pred CceEEEECcCHHHHHHHHHHH-HCcCEEEEECCCcchh
Confidence 4689999999 566777665 4689999999987644
No 487
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=77.41 E-value=15 Score=29.96 Aligned_cols=76 Identities=12% Similarity=0.042 Sum_probs=48.0
Q ss_pred CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEEE
Q 038592 286 FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIMV 365 (478)
Q Consensus 286 ~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIiv 365 (478)
.+|..||=|+...+.-+..+........-....++.+.++.+.... .....||+||+
T Consensus 10 ~~iLivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~-----------------------~~~~~~dlvi~ 66 (146)
T 3ilh_A 10 DSVLLIDDDDIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELY-----------------------AAGRWPSIICI 66 (146)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHH-----------------------TSSCCCSEEEE
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhh-----------------------ccCCCCCEEEE
Confidence 5788999999888887777643211112335667777665542210 12367999999
Q ss_pred eCCCCCCCCCCCCCCCCCChHHHHHHHHHc
Q 038592 366 DLDSGDARNGTSAPPVEFVRKDVLLAARLI 395 (478)
Q Consensus 366 Dv~s~d~~~g~s~Pp~~f~~~efl~~~~~~ 395 (478)
|+.-++ .-..++++.+++.
T Consensus 67 D~~l~~-----------~~g~~~~~~l~~~ 85 (146)
T 3ilh_A 67 DINMPG-----------INGWELIDLFKQH 85 (146)
T ss_dssp ESSCSS-----------SCHHHHHHHHHHH
T ss_pred cCCCCC-----------CCHHHHHHHHHHh
Confidence 986443 2346788888883
No 488
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=77.30 E-value=13 Score=30.52 Aligned_cols=71 Identities=21% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEE
Q 038592 285 DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIM 364 (478)
Q Consensus 285 ~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi 364 (478)
..+|..||=|+...+.-++.+.-......-....|+.+.++.+ ....||+||
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l----------------------------~~~~~dlii 56 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQV----------------------------QQAKYDLII 56 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHH----------------------------TTCCCSEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHh----------------------------hcCCCCEEE
Confidence 3589999999999888877764221111234567888777664 345699999
Q ss_pred EeCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 038592 365 VDLDSGDARNGTSAPPVEFVRKDVLLAARL 394 (478)
Q Consensus 365 vDv~s~d~~~g~s~Pp~~f~~~efl~~~~~ 394 (478)
+|..-++. -..++++.+++
T Consensus 57 ~D~~l~~~-----------~g~~~~~~lr~ 75 (144)
T 3kht_A 57 LDIGLPIA-----------NGFEVMSAVRK 75 (144)
T ss_dssp ECTTCGGG-----------CHHHHHHHHHS
T ss_pred EeCCCCCC-----------CHHHHHHHHHh
Confidence 99754321 24678888887
No 489
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=77.27 E-value=17 Score=33.05 Aligned_cols=54 Identities=11% Similarity=0.095 Sum_probs=36.0
Q ss_pred CeEEEEeCchhH---HHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH
Q 038592 264 PKALCVGVGGGA---LVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE 322 (478)
Q Consensus 264 ~~VLvIGlGgG~---L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~ 322 (478)
++|||.|+++|. ++..|.+. +.+|.+++.++.-++.+.+.++ .++.++..|..+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~-G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~ 58 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAE-GKATYLTGRSESKLSTVTNCLS----NNVGYRARDLAS 58 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHT-TCCEEEEESCHHHHHHHHHTCS----SCCCEEECCTTC
T ss_pred CEEEEecCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHh----hccCeEeecCCC
Confidence 468999987553 33333332 6799999999988877766552 456677666554
No 490
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=77.22 E-value=16 Score=29.41 Aligned_cols=78 Identities=19% Similarity=0.183 Sum_probs=48.2
Q ss_pred CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEE
Q 038592 285 DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIM 364 (478)
Q Consensus 285 ~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi 364 (478)
+.+|..||-|+...+.-++.+.-. +-. -+...|+.+.++.+ ...+||+|+
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~-g~~-v~~~~~~~~a~~~l----------------------------~~~~~dlvi 56 (130)
T 3eod_A 7 GKQILIVEDEQVFRSLLDSWFSSL-GAT-TVLAADGVDALELL----------------------------GGFTPDLMI 56 (130)
T ss_dssp TCEEEEECSCHHHHHHHHHHHHHT-TCE-EEEESCHHHHHHHH----------------------------TTCCCSEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhC-Cce-EEEeCCHHHHHHHH----------------------------hcCCCCEEE
Confidence 468889999998888777665321 112 23467888877664 345699999
Q ss_pred EeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEE
Q 038592 365 VDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFV 403 (478)
Q Consensus 365 vDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv 403 (478)
+|..-++. -..++++.+++.-..--+++
T Consensus 57 ~d~~l~~~-----------~g~~~~~~l~~~~~~~~ii~ 84 (130)
T 3eod_A 57 CDIAMPRM-----------NGLKLLEHIRNRGDQTPVLV 84 (130)
T ss_dssp ECCC----------------CHHHHHHHHHTTCCCCEEE
T ss_pred EecCCCCC-----------CHHHHHHHHHhcCCCCCEEE
Confidence 99864432 22678888887543333443
No 491
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=77.08 E-value=12 Score=36.81 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=36.4
Q ss_pred CeEEEEeCch--hHHHHHHHhhCCCEEE-EEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 264 PKALCVGVGG--GALVSFLRTQLDFEVV-GVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 264 ~~VLvIGlGg--G~L~~~L~~~~~~~V~-~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
.||.+||+|. ......|.+..+.+++ ++|.+++-.+.+.+.++.. -...|..+.+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~------~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVE------KAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCS------EEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCC------ceeCCHHHHh
Confidence 4899999994 3345555555567877 5699999877655555531 2345666665
No 492
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=77.05 E-value=6.7 Score=43.31 Aligned_cols=41 Identities=15% Similarity=0.225 Sum_probs=32.2
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHh
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQY 304 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~ 304 (478)
..+|.|||+| |+.++..+.+. +.+|+++|++++.++.++.+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~~~~~~~~~~ 356 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK-GTPILMKDINEHGIEQGLAE 356 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT-TCCEEEECSSHHHHHHHHHH
T ss_pred CCEEEEECCChhhHHHHHHHHhC-CCEEEEEECCHHHHHHHHHH
Confidence 4579999999 55667666654 67999999999988877554
No 493
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=77.00 E-value=8.6 Score=35.95 Aligned_cols=87 Identities=17% Similarity=0.128 Sum_probs=55.0
Q ss_pred CeEEEEeCc--hhHHHHHHHhhC--C-CEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCC
Q 038592 264 PKALCVGVG--GGALVSFLRTQL--D-FEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDS 338 (478)
Q Consensus 264 ~~VLvIGlG--gG~L~~~L~~~~--~-~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~ 338 (478)
.+|.+||+| |+.++..|.+.- . .+|.+++.+++- +| +++ ..|..+.++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-------~g------~~~-~~~~~~~~~------------- 57 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-------TT------LNY-MSSNEELAR------------- 57 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-------SS------SEE-CSCHHHHHH-------------
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-------Cc------eEE-eCCHHHHHh-------------
Confidence 589999999 566777776542 1 589999988764 23 222 233333332
Q ss_pred CCcccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCc
Q 038592 339 FGACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNR 411 (478)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~ 411 (478)
..|+||+-+ ||. ...+.+..+...| ++++++....+-..
T Consensus 58 --------------------~~D~vi~~v-----------~~~--~~~~v~~~l~~~l-~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 58 --------------------HCDIIVCAV-----------KPD--IAGSVLNNIKPYL-SSKLLISICGGLNI 96 (262)
T ss_dssp --------------------HCSEEEECS-----------CTT--THHHHHHHSGGGC-TTCEEEECCSSCCH
T ss_pred --------------------cCCEEEEEe-----------CHH--HHHHHHHHHHHhc-CCCEEEEECCCCCH
Confidence 369999933 222 3467888888878 67777766555544
No 494
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=76.85 E-value=8.4 Score=37.90 Aligned_cols=56 Identities=11% Similarity=0.150 Sum_probs=37.0
Q ss_pred CeEEEEeCch--hHHHHHHH-hhCCCEEE-EEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHH
Q 038592 264 PKALCVGVGG--GALVSFLR-TQLDFEVV-GVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFL 324 (478)
Q Consensus 264 ~~VLvIGlGg--G~L~~~L~-~~~~~~V~-~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l 324 (478)
.||.+||+|. ......+. +..+.+++ ++|.+++-.+...+.|+.. . -...|..+.+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~----~-~~~~~~~~ll 62 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLN----A-TVYPNDDSLL 62 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCC----C-EEESSHHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCC----C-eeeCCHHHHh
Confidence 4899999994 34555566 44567877 5799999887666666631 1 2345666665
No 495
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.67 E-value=5.2 Score=41.69 Aligned_cols=57 Identities=23% Similarity=0.252 Sum_probs=42.9
Q ss_pred CCeEEEEeCch--hHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHH--HHHH
Q 038592 263 RPKALCVGVGG--GALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIE--FLEK 326 (478)
Q Consensus 263 ~~~VLvIGlGg--G~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~--~l~~ 326 (478)
.++|+|+|+|- -.++..|.+ ..+|..+|.|++-.+...+-+ ++..|++|||.+ .|++
T Consensus 235 ~~~v~I~GgG~ig~~lA~~L~~--~~~v~iIE~d~~r~~~la~~l-----~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 235 YRRIMIVGGGNIGASLAKRLEQ--TYSVKLIERNLQRAEKLSEEL-----ENTIVFCGDAADQELLTE 295 (461)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHC-----TTSEEEESCTTCHHHHHH
T ss_pred ccEEEEEcchHHHHHHHHHhhh--cCceEEEecCHHHHHHHHHHC-----CCceEEeccccchhhHhh
Confidence 57999999883 235555543 479999999999888766654 357899999987 5655
No 496
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=76.59 E-value=10 Score=37.98 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=61.4
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFG 340 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~ 340 (478)
.++|.|||+| |+.+++.+. .++++|.+++.++.- .+. ...+. .+.-+.+++
T Consensus 148 gktvgIiGlG~IG~~vA~~l~-~~G~~V~~~d~~~~~------~~~----~~~~~--~~l~ell~~-------------- 200 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFS-AMGAKVIAYDVAYNP------EFE----PFLTY--TDFDTVLKE-------------- 200 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCG------GGT----TTCEE--CCHHHHHHH--------------
T ss_pred CCeEEEEecCHHHHHHHHHHh-hCCCEEEEECCChhh------hhh----ccccc--cCHHHHHhc--------------
Confidence 4689999999 566776665 468999999988742 111 11222 244444432
Q ss_pred cccccCCCccCCCCCCCCceeEEEEeCCCCCCCCCCCCCCCCCChHHHHHHHHHccCcCcEEEEEeCCCCchHHHHHHHH
Q 038592 341 ACSLKDGNFLDNSDRVDNKFDVIMVDLDSGDARNGTSAPPVEFVRKDVLLAARLILSDFGIFVMNVIPPNRSFYDMLIQE 420 (478)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~yDvIivDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~~~Gilv~N~~~~~~~~~~~v~~~ 420 (478)
-|+|++-+...+.+ .+++..+.|. .|+++ .+++|+..-..---+.+++.
T Consensus 201 -------------------aDvV~l~~Plt~~t-------~~li~~~~l~----~mk~g-ailIN~aRg~~vd~~aL~~a 249 (343)
T 2yq5_A 201 -------------------ADIVSLHTPLFPST-------ENMIGEKQLK----EMKKS-AYLINCARGELVDTGALIKA 249 (343)
T ss_dssp -------------------CSEEEECCCCCTTT-------TTCBCHHHHH----HSCTT-CEEEECSCGGGBCHHHHHHH
T ss_pred -------------------CCEEEEcCCCCHHH-------HHHhhHHHHh----hCCCC-cEEEECCCChhhhHHHHHHH
Confidence 69999955433221 3456665554 46665 55668865432223456666
Q ss_pred HHHh
Q 038592 421 FRDV 424 (478)
Q Consensus 421 l~~v 424 (478)
|++-
T Consensus 250 L~~g 253 (343)
T 2yq5_A 250 LQDG 253 (343)
T ss_dssp HHHT
T ss_pred HHcC
Confidence 7654
No 497
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=76.50 E-value=2 Score=38.08 Aligned_cols=33 Identities=15% Similarity=0.089 Sum_probs=22.9
Q ss_pred CeEEEEeCc-hhHHHHHHHhhCCCEEEEEECChH
Q 038592 264 PKALCVGVG-GGALVSFLRTQLDFEVVGVEMDEV 296 (478)
Q Consensus 264 ~~VLvIGlG-gG~L~~~L~~~~~~~V~~VEiDp~ 296 (478)
..|+|||+| +|..+.......+.+|+++|-.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 469999999 454333333345889999997653
No 498
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=76.48 E-value=18 Score=30.17 Aligned_cols=72 Identities=22% Similarity=0.289 Sum_probs=49.0
Q ss_pred CCEEEEEECChHHHHHHHHhcCCCCCCCeEEEEchHHHHHHHHHhhhcCCCCCCCCcccccCCCccCCCCCCCCceeEEE
Q 038592 285 DFEVVGVEMDEVVLRVARQYFGLEDGEFLQVSVGDAIEFLEKLARQIVGKNPDSFGACSLKDGNFLDNSDRVDNKFDVIM 364 (478)
Q Consensus 285 ~~~V~~VEiDp~Vl~vA~~~Fg~~~d~rl~v~v~Dg~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yDvIi 364 (478)
..+|..||=|+...+.-++.+.. +-.+ ....++.+.++.+.. ...||+|+
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~~--~~~v-~~~~~~~~a~~~l~~---------------------------~~~~dlvi 53 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLSF--DFEV-TTCESGPEALACIKK---------------------------SDPFSVIM 53 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTT--TSEE-EEESSHHHHHHHHHH---------------------------SCCCSEEE
T ss_pred CCeEEEEeCCHHHHHHHHHHhcc--CceE-EEeCCHHHHHHHHHc---------------------------CCCCCEEE
Confidence 35899999999999988888852 2222 356777777765422 23489999
Q ss_pred EeCCCCCCCCCCCCCCCCCChHHHHHHHHHccC
Q 038592 365 VDLDSGDARNGTSAPPVEFVRKDVLLAARLILS 397 (478)
Q Consensus 365 vDv~s~d~~~g~s~Pp~~f~~~efl~~~~~~L~ 397 (478)
+|+.-++. -..++++.+++.-.
T Consensus 54 ~D~~l~~~-----------~g~~~~~~l~~~~~ 75 (151)
T 3kcn_A 54 VDMRMPGM-----------EGTEVIQKARLISP 75 (151)
T ss_dssp EESCCSSS-----------CHHHHHHHHHHHCS
T ss_pred EeCCCCCC-----------cHHHHHHHHHhcCC
Confidence 99864331 24678888887543
No 499
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=76.47 E-value=4.4 Score=36.68 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=26.0
Q ss_pred eEEEEe-Cc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHH
Q 038592 265 KALCVG-VG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQ 303 (478)
Q Consensus 265 ~VLvIG-lG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~ 303 (478)
+|+++| +| |..++..|.+. +.+|.+++.+++-.+...+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~~~~~~~~~ 42 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRREEKAEAKAA 42 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSHHHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 689999 76 23455555442 5799999999887665443
No 500
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=76.20 E-value=14 Score=34.57 Aligned_cols=44 Identities=18% Similarity=0.169 Sum_probs=31.7
Q ss_pred CCeEEEEeCc--hhHHHHHHHhhCCCEEEEEECChHHHHHHHHhcCC
Q 038592 263 RPKALCVGVG--GGALVSFLRTQLDFEVVGVEMDEVVLRVARQYFGL 307 (478)
Q Consensus 263 ~~~VLvIGlG--gG~L~~~L~~~~~~~V~~VEiDp~Vl~vA~~~Fg~ 307 (478)
+.+|.+||+| |+.++..|.+. +..|.+++.+++-.+...+.+|.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~-g~~v~~~~~~~~~~~~~~~~~g~ 48 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT-PHELIISGSSLERSKEIAEQLAL 48 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS-SCEEEEECSSHHHHHHHHHHHTC
T ss_pred ccEEEEECCCHHHHHHHHHHHhC-CCeEEEECCCHHHHHHHHHHcCC
Confidence 4689999998 44455555543 46899999999988766655553
Done!