BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038596
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZK33|LETM1_CHICK LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Gallus gallus GN=LETM1 PE=2 SV=1
Length = 752
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L RL+ IK DDK+I EGV+SL+ EL+ CR RG
Sbjct: 321 PQLVALCKLLELQSIGTNNFLRFQLTMRLRTIKADDKMIAEEGVDSLTVKELQAACRARG 380
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L EE +R+QL+ WLDL LN +P+SLLILSRA + L P + ++ TL +LP+
Sbjct: 381 MRALGVTEERLREQLKQWLDLHLNQEIPTSLLILSRAMYLPDTLSPADQLKTTLQTLPES 440
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELI-KEEEEKE 159
V V E + + +LE +E I KE EEKE
Sbjct: 441 VAKEAQVKVAEVEGEKVDNKARLEATLQEEAAIRKENEEKE 481
>sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Rattus norvegicus GN=Letm1 PE=1 SV=1
Length = 739
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L RL+ IK DDKLI EGV+SL+ EL+ CR RG
Sbjct: 323 PQLVALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLISEEGVDSLTVKELQAACRARG 382
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L E+ ++ QL+ WLDL L H +P+SLLILSRA + L P + +++TL +LP+
Sbjct: 383 MRALGVTEDRLKGQLKQWLDLHLYHEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEI 442
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELIKEEEEKEGK 161
V V A E + + KLE +E I++E +E K
Sbjct: 443 VAKEAQVKAAEVEGEQVDNKAKLEATLQEEAAIQQEHLEELK 484
>sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Mus
musculus GN=Letm1 PE=2 SV=1
Length = 738
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 99/162 (61%), Gaps = 1/162 (0%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L RL+ IK DDKLI EGV+SL+ EL+ CR RG
Sbjct: 323 PQLVALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLISEEGVDSLTVKELQAACRARG 382
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L E+ ++ QL+ WLDL L+H +P+SLLILSRA + L P + +++TL +LP+
Sbjct: 383 MRALGVTEDRLKGQLKQWLDLHLHHEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEI 442
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELIKEEEEKEGK 161
V V E + + KLE +E I++E +E K
Sbjct: 443 VAKEAQVKVAEVEGEKVDNKAKLEATLQEEAAIQQEHLEELK 484
>sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Homo sapiens GN=LETM1 PE=1 SV=1
Length = 739
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L RL+ IK DDKLI EGV+SL+ EL+ CR RG
Sbjct: 324 PQLVALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARG 383
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L E+ +R QL+ WLDL L+ +P+SLLILSRA + L P + +++TL +LP+
Sbjct: 384 MRALGVTEDRLRGQLKQWLDLHLHQEIPTSLLILSRAMYLPDTLSPADQLKSTLQTLPEI 443
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELIKEEEEKEGKEL 163
V V E + + KLE +QEE ++E +E KEL
Sbjct: 444 VAKEAQVKVAEVEGEQVDNKAKLEA-TLQEEAAIQQEHRE-KEL 485
>sp|Q0VCA3|LETM1_BOVIN LETM1 and EF-hand domain-containing protein 1, mitochondrial OS=Bos
taurus GN=LETM1 PE=2 SV=1
Length = 732
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 101/164 (61%), Gaps = 3/164 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L RL+ IK DDKLI EGV+SL+ EL+ CR RG
Sbjct: 310 PQLVALCKLLELQSIGTNNFLRFQLTMRLRSIKADDKLIAEEGVDSLNVKELQAACRARG 369
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L E+ +R QL+ WL+L L+ +P+SLLILSRA + L P + +++TL +LP+
Sbjct: 370 MRALGVTEDRLRGQLKQWLELHLHQEIPTSLLILSRAMYLPETLSPADQLKSTLQTLPEI 429
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELIKEEEEKEGKEL 163
V V E + + KLE +QEE ++E +E KEL
Sbjct: 430 VAKEAQVKVAEVEGEQVDNKAKLEA-TLQEEAAIQQEHRE-KEL 471
>sp|Q1LY46|LETM1_DANRE LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Danio rerio GN=letm1 PE=3 SV=2
Length = 757
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L +L+ I+ DDKLI EGV+SL+ EL+ CR RG
Sbjct: 331 PQLVALCKLLELQSIGTNNFLRFQLIMKLRAIRADDKLIAEEGVDSLTANELQAACRVRG 390
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L EE +R+QL+ WL+L LN +P+SLL+LSRA + L P + ++ TL +LP+
Sbjct: 391 MRALGVTEERLREQLKQWLELHLNQHIPTSLLLLSRAMFLPDTLSPADQLKTTLQNLPEI 450
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELIKEE 155
+ V + S + + KLE +E I++E
Sbjct: 451 MAKEAQVKVAELDFSKVDNKTKLETTLQEEAAIRQE 486
>sp|Q0VA06|LETM1_XENTR LETM1 and EF-hand domain-containing protein 1, mitochondrial
OS=Xenopus tropicalis GN=letm1 PE=2 SV=1
Length = 760
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 2/161 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + GT+++LR+ L +L+ IK DDKLI EG++SL+ EL+ CR RG
Sbjct: 326 PQLVALCKLLELQSIGTNNFLRFQLTMKLRSIKADDKLIADEGLDSLTVTELQAACRARG 385
Query: 61 MLGLLSVEE-MRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDE 119
M L E+ +++QL+ WL+L L+ +P+SLL+LSRA + L P + ++ TL +LP+
Sbjct: 386 MRALGVTEDRLKEQLKQWLELHLDQEIPTSLLLLSRALYLPDTLSPADQLKTTLQTLPES 445
Query: 120 VVDTVGVTALPSEDSVSERRRKLEYLAMQEELI-KEEEEKE 159
V V E + + KLE +EE I KE +EKE
Sbjct: 446 VAKEAQVKVAAVECEKVDNKTKLEATLQEEEAIRKENQEKE 486
>sp|Q08179|MDM38_YEAST Mitochondrial distribution and morphology protein 38
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MDM38 PE=1 SV=1
Length = 573
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+L M K+M + PFG D+ LRY +R +L+ I NDDK I EGVESLS+ EL + C RG
Sbjct: 260 PQLAAMSKFMSLRPFGNDNMLRYQIRSKLKDIMNDDKTIDYEGVESLSQEELYQACVSRG 319
Query: 61 MLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSL 116
M +S E++ L+ WL+L L +PS L++LS FT G P+E S L
Sbjct: 320 MKAYGVSKEDLVDNLKVWLELRLRQKIPSVLMVLSSTFTFGG--LPKENYSKAFSPL 374
>sp|O13920|MDM28_SCHPO LETM1 domain-containing protein mdm28, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mdm28 PE=2 SV=3
Length = 485
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Query: 2 RLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGM 61
+LV MC+YM ++ FGTD LRY +R R++ I+ DD+ I EG+ SLS EL C RG+
Sbjct: 289 QLVAMCRYMNLNAFGTDPLLRYNIRHRMRQIRRDDRAIYIEGINSLSIPELFNACNSRGI 348
Query: 62 LGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFTVS---GKLRPE-EAVQATLSSL 116
LS +++++L WLD+ + H +PS +L+LS AF+ G +A+Q TL+S+
Sbjct: 349 RTQGLSPAKLKEELSVWLDMRIKHGIPSVILMLSNAFSYGYNEGTYDSRWDALQDTLASI 408
Query: 117 PDEVVDTVGVTALPSEDSVSERRR 140
PDE+ V +P++ VS + R
Sbjct: 409 PDELYHET-VVDMPTKQ-VSNKER 430
>sp|Q5PQQ5|LETM2_RAT LETM1 domain-containing protein LETM2, mitochondrial OS=Rattus
norvegicus GN=Letm2 PE=2 SV=1
Length = 459
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + FGT++ LR+ L L+ IK DD++I EGV++LS +EL+ CR RG
Sbjct: 294 PQLVALCKLLELQAFGTNNLLRFQLLMTLRSIKADDEVIAKEGVKALSVSELQAACRARG 353
Query: 61 MLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 97
M L L+ E++RQQL +WLDL L +VP SLL+LSR F
Sbjct: 354 MRSLGLTEEQLRQQLTEWLDLHLKENVPPSLLLLSRTF 391
>sp|Q2VYF4|LETM2_HUMAN LETM1 domain-containing protein LETM2, mitochondrial OS=Homo
sapiens GN=LETM2 PE=2 SV=2
Length = 491
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + FGT++ LR+ L +L+ IK DD++I EGV +LS +EL+ CR RG
Sbjct: 292 PQLVALCKLLELQTFGTNNLLRFQLLMKLKSIKADDEIIAKEGVTALSVSELQAACRARG 351
Query: 61 MLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 97
M L L+ E++RQQL +W DL L +VP SLL+LSR F
Sbjct: 352 MRSLGLTEEQLRQQLTEWQDLHLKENVPPSLLLLSRTF 389
>sp|Q7TNU7|LETM2_MOUSE LETM1 domain-containing protein LETM2, mitochondrial OS=Mus
musculus GN=Letm2 PE=2 SV=1
Length = 480
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P+LV +CK + + FGT++ LR+ L L+ IK DD++I EGV++LS +EL+ CR RG
Sbjct: 290 PQLVALCKLLELQTFGTNNLLRFQLLMTLKSIKADDEIIAKEGVKALSVSELQSACRARG 349
Query: 61 MLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 97
M L L+ E++ QQL WLDL L +VP SLL+LSR F
Sbjct: 350 MRSLGLTEEQLCQQLTGWLDLHLKENVPPSLLLLSRTF 387
>sp|P91927|A60DA_DROME LETM1 and EF-hand domain-containing protein anon-60Da,
mitochondrial OS=Drosophila melanogaster GN=Letm1 PE=2
SV=2
Length = 1013
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 2 RLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGM 61
+L +C+ + ++ GT + LR+ LR +L+ + DD++I EGV+SL EL++ C+ RGM
Sbjct: 353 QLAALCRVLELNTIGTTTLLRFQLRLKLRSLATDDRVIAREGVDSLDLLELQQACKARGM 412
Query: 62 LGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEV 120
L+ E +R QL++W+DLSLN VP +LL+LSR +S + ++ T+ LPD V
Sbjct: 413 RAYGLTEERLRFQLKEWIDLSLNEQVPPTLLLLSRTMLISDDSITTDKLKETIRVLPDAV 472
>sp|Q06493|YLH47_YEAST LETM1 domain-containing protein YLH47, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YLH47 PE=1 SV=1
Length = 454
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 1 PRLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERG 60
P L+ + KYM + PFGTD LRY +R ++ +K DD I E E LS +EL+ C RG
Sbjct: 250 PYLIALAKYMNLQPFGTDVMLRYRIRYKMLELKKDDLSIYYEDAEQLSLSELKTACASRG 309
Query: 61 MLGL-LSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF---TVSGKLRPEEAVQATLSSL 116
+ + + + LR WL++ L +PS+LLI++ A+ V K +A+ L +
Sbjct: 310 IRSVDVEPSVLYSNLRLWLNMRLKDKIPSTLLIMATAYNYGNVQSKESLYDALCDVLIGI 369
Query: 117 PDEVVDTVGVTALPSEDSVSERRR 140
PDE+ V V + ED S +++
Sbjct: 370 PDELYHEVKVNVV-KEDEASAKQK 392
>sp|Q28DA8|LETM2_XENTR LETM1 domain-containing protein LETM2, mitochondrial OS=Xenopus
tropicalis GN=letm2 PE=2 SV=1
Length = 444
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 2 RLVNMCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGM 61
+LV +C+ + + P GT++ LR+ L +L+ I+ DD++I EGVE+L+ AEL+ R RGM
Sbjct: 273 QLVALCRLLELPPIGTNNLLRFQLMMQLRSIRADDEMISKEGVENLTVAELQAASRARGM 332
Query: 62 LGL-LSVEEMRQQLRDWLDLSLNHSVPSS 89
L L+ E++++Q++ WLDL L +VP S
Sbjct: 333 RSLGLTEEQLKEQMKQWLDLHLKENVPPS 361
>sp|A3KN46|LTMD1_BOVIN LETM1 domain-containing protein 1 OS=Bos taurus GN=LETMD1 PE=2 SV=1
Length = 360
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 6 MCKYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGMLGLL 65
+C+ M ++P+ LR+ L+ I DK + GV L+ E++ C RG+
Sbjct: 257 LCRAMLLTPYLPSVLLRHRLKTHTTVIHQLDKALAKLGVGQLTAQEVKSACYLRGLNSTH 316
Query: 66 SVEE-MRQQLRDWLDLS 81
EE R L +WL +S
Sbjct: 317 IAEERCRTWLGEWLQIS 333
>sp|B0BM16|SKA3_XENTR Spindle and kinetochore-associated protein 3 OS=Xenopus tropicalis
GN=ska3 PE=2 SV=2
Length = 561
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 8 KYMGISPFGT---DSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGMLGL 64
++ GIS T D Y ++ K+ Q KN ++++E +E C+ + + L
Sbjct: 220 QHFGISDCSTNLNDDYTMALINKKFQ--KN----------QNVTENAAKETCQPKNLKSL 267
Query: 65 LSVEEMRQQLRDWLDLSLN--HSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEVVD 122
L+ DW+D L P + ++ GK ++ + A ++LP + D
Sbjct: 268 LATPSHLSHRMDWVDSPLPPVFCTPGLKVHKKEKMSLPGKPAEKKGLNANNTTLPSDTCD 327
>sp|Q28EM8|LTMD1_XENTR LETM1 domain-containing protein 1 OS=Xenopus tropicalis GN=letmd1
PE=2 SV=1
Length = 351
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 8 KYMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGMLGL-LS 66
+ M ++P L++ L + I+N D + GV LSE EL+ C RG+ LS
Sbjct: 249 RVMFLTPHLPAFLLQHRLGSHICEIQNLDCALLKLGVNELSEEELKRACYIRGLNSTHLS 308
Query: 67 VEEMRQQLRDWLDLS 81
E+ L WL LS
Sbjct: 309 REDCETWLHCWLQLS 323
>sp|Q8TF72|SHRM3_HUMAN Protein Shroom3 OS=Homo sapiens GN=SHROOM3 PE=1 SV=2
Length = 1996
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 51 ELRE--DCRERGMLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEA 108
EL+E D RER +LG+L+ +QL+D+ + S+LLI R KL +E
Sbjct: 1893 ELKENLDRRERVVLGILANYLSEEQLQDYQHFV---KMKSTLLIEQRKLDDKIKLG-QEQ 1948
Query: 109 VQATLSSLPDEVVDTVGVTALP 130
V+ L SLP + + G ALP
Sbjct: 1949 VKCLLESLPSDFIPKAGALALP 1970
>sp|Q5SJE8|TAL_THET8 Probable transaldolase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=tal PE=1 SV=1
Length = 223
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 66 SVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEVVDTVG 125
S+EE+R+ + W LS V ++ ++++AF G+ EEA A L ++ + V V
Sbjct: 9 SLEEIRE-IAAWGVLS---GVTTNPTLVAKAFAAKGEALTEEAFAAHLRAICETVGGPVS 64
Query: 126 --VTALPSEDSVSERRR 140
VTAL +E V+E RR
Sbjct: 65 AEVTALEAEAMVAEGRR 81
>sp|Q9UEF7|KLOT_HUMAN Klotho OS=Homo sapiens GN=KL PE=1 SV=2
Length = 1012
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 72 QQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEA---------VQATLSSLPDEVVD 122
+QL W+DL NH + I+ + VSG + ++A + TL ++ + VD
Sbjct: 395 RQLLSWIDLEFNH---PQIFIVENGWFVSGTTKRDDAKYMYYLKKFIMETLKAIKLDGVD 451
Query: 123 TVGVTA 128
+G TA
Sbjct: 452 VIGYTA 457
>sp|B0CB83|RIMO_ACAM1 Ribosomal protein S12 methylthiotransferase RimO OS=Acaryochloris
marina (strain MBIC 11017) GN=rimO PE=3 SV=1
Length = 443
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 77 WLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEVVDTVGVTALPSE 132
+LDL L HS P L ++R + G++ ++ ++ ++LPD V+ T + P E
Sbjct: 255 YLDLPLQHSHPEVLRAMNRPW--QGQVN-DQIIEKIKTALPDAVLRTTFIVGFPGE 307
>sp|Q252Y1|NDK_CHLFF Nucleoside diphosphate kinase OS=Chlamydophila felis (strain
Fe/C-56) GN=ndk PE=3 SV=1
Length = 141
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 63 GLLSVEEMRQQLRDWLDLSLNHSVPSSLLILS------RAFTVSGKLRPEEAVQATLSSL 116
G +V + R ++ +D + S P +++L R + G P+EA Q T+ +
Sbjct: 47 GFYAVHKSRPFFQELVDFMI--SGPVVVMVLEGDNAVVRNREIMGATNPQEAAQGTIRA- 103
Query: 117 PDEVVDTVGVTALPSEDSVSERRRKLEYLAMQEELIKEEE 156
+ +++G+ A+ DS+ ++ Y + E++ E
Sbjct: 104 --QFGESIGINAVHGSDSLENAAIEISYFFSKTEIVNSVE 141
>sp|Q8WP17|KLOT_MACFA Klotho OS=Macaca fascicularis GN=KL PE=2 SV=1
Length = 1014
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 72 QQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEA---------VQATLSSLPDEVVD 122
+QL W+DL NH + I+ + VSG + ++A + TL ++ + VD
Sbjct: 397 RQLLSWIDLEYNH---PQIFIVENGWFVSGTTKRDDAKYMYYLKKFIMETLKAIKLDGVD 453
Query: 123 TVGVTA 128
+G TA
Sbjct: 454 VIGYTA 459
>sp|Q9Z2Y9|KLOT_RAT Klotho OS=Rattus norvegicus GN=Kl PE=1 SV=1
Length = 1014
Score = 31.2 bits (69), Expect = 3.2, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Query: 72 QQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEA---------VQATLSSLPDEVVD 122
+QL W+DL NH + I+ + VSG R ++A + +L ++ + VD
Sbjct: 397 RQLLSWIDLEYNH---PQIFIVENGWFVSGTTRRDDAKYMYYLKKFIMESLKAIRLDGVD 453
Query: 123 TVGVTALPSEDSVSERR----RK----LEYLAMQEELI 152
+G TA D R R+ +++L+ +EL+
Sbjct: 454 VIGYTAWSLMDGFEWHRGYSIRRGLFYVDFLSQDKELL 491
>sp|B1WWD8|LEPA_CYAA5 Elongation factor 4 OS=Cyanothece sp. (strain ATCC 51142) GN=lepA
PE=3 SV=1
Length = 603
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 9 YMGISPFGTDSYLRYMLRKRLQWIKNDDKLIQAEGVESLSEAELREDCRERGMLGLLSVE 68
+ G+ P D Y LR+ L +K +D + E E+ S C G LGLL +E
Sbjct: 301 FCGLFPTDADQYED--LREALNRLKLNDAALSYEP-ETSSAMGFGFRC---GFLGLLHME 354
Query: 69 EMRQQLRDWLDLSLNHSVPSSLLILSRAFTVSGKL 103
++++L DL L + PS ++ R T+ G++
Sbjct: 355 IVQERLEREYDLDLITTAPS---VIYRVTTIDGEV 386
>sp|O35082|KLOT_MOUSE Klotho OS=Mus musculus GN=Kl PE=1 SV=2
Length = 1014
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 20/98 (20%)
Query: 72 QQLRDWLDLSLNHSVPSSLLILSRAFTVSGKLRPEEA---------VQATLSSLPDEVVD 122
+QL W+DL NH + I+ + VSG + ++A + TL ++ + VD
Sbjct: 397 RQLLSWIDLEYNH---PPIFIVENGWFVSGTTKRDDAKYMYYLKKFIMETLKAIRLDGVD 453
Query: 123 TVGVTALPSEDSVSERR----RK----LEYLAMQEELI 152
+G TA D R R+ +++L+ +EL+
Sbjct: 454 VIGYTAWSLMDGFEWHRGYSIRRGLFYVDFLSQDKELL 491
>sp|P0CN91|ATG26_CRYNB Sterol 3-beta-glucosyltransferase OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ATG26 PE=3 SV=1
Length = 1585
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 31 WIKNDDKLIQAEGVESLSEAELREDCRERGMLGLLSVEEMRQQLRDWLDLSLNHS 85
W++ ++ G + AEL + C + GM + ++E Q+ R WLD LN S
Sbjct: 1075 WVEGHGIAFESVGGDP---AELMQMCVDNGMFTVSFLKEGLQKFRGWLDDLLNSS 1126
>sp|P0CN90|ATG26_CRYNJ Sterol 3-beta-glucosyltransferase OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ATG26 PE=3 SV=1
Length = 1585
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 31 WIKNDDKLIQAEGVESLSEAELREDCRERGMLGLLSVEEMRQQLRDWLDLSLNHS 85
W++ ++ G + AEL + C + GM + ++E Q+ R WLD LN S
Sbjct: 1075 WVEGHGIAFESVGGDP---AELMQMCVDNGMFTVSFLKEGLQKFRGWLDDLLNSS 1126
>sp|A0LIM0|RIMO_SYNFM Ribosomal protein S12 methylthiotransferase RimO OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=rimO PE=3 SV=1
Length = 444
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 77 WLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEVVDTVGVTALPSE 132
+LD+ L H VP L + R+ T PE V A S +P + T + P E
Sbjct: 259 YLDIPLQHCVPRILASMGRSGT-----DPERIVDAIRSGIPGVALRTSLIVGFPGE 309
>sp|A5GQP4|RIMO_SYNR3 Ribosomal protein S12 methylthiotransferase RimO OS=Synechococcus
sp. (strain RCC307) GN=rimO PE=3 SV=1
Length = 487
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 77 WLDLSLNHSVPSSLLILSRAFT--VSGKLRPEEAVQATLSSLPDEVVDTVGVTALPSE 132
+LDL L HS P L ++R + V+G+L +Q LPD V+ T + P E
Sbjct: 288 YLDLPLQHSHPEVLRAMNRPWQEGVNGQL-----LQRIREQLPDAVLRTTFIVGYPGE 340
>sp|Q2T9P4|NASP_BOVIN Nuclear autoantigenic sperm protein OS=Bos taurus GN=NASP PE=2 SV=2
Length = 777
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 33 KNDDKLIQAEGVESLSEAELREDCRERGMLG--LLSVEE 69
K D ++ AE +S+SE +++E+CRE+G G ++S+EE
Sbjct: 231 KPDQEIPGAEEGKSVSETDVQEECREKGGQGEVIVSIEE 269
>sp|C0ZCE9|AROA_BREBN 3-phosphoshikimate 1-carboxyvinyltransferase OS=Brevibacillus
brevis (strain 47 / JCM 6285 / NBRC 100599) GN=aroA PE=3
SV=1
Length = 426
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 39 IQAEGVESLSEAELREDCRERGMLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAFT 98
+QA+GV S++E L D ER ML V Q +RD L + SV + RA +
Sbjct: 177 LQAKGVTSVTEPHLSRDHTER-MLQAFGV----QVVRDGLTV----SVEGGQKLKGRAIS 227
Query: 99 VSGKLRPEEAVQATLSSLPDE--VVDTVGVTALPSE----DSVSERRRKLEYLAMQEELI 152
V G + + A + +P +++ VG+ PS D V LE L E ++
Sbjct: 228 VPGDISSAAFLIAAVMVVPGSSLLIENVGIN--PSRTGIIDVVKAMGGSLELL--NERIV 283
Query: 153 KEE 155
EE
Sbjct: 284 NEE 286
>sp|Q5N1N6|RIMO_SYNP6 Ribosomal protein S12 methylthiotransferase RimO OS=Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rimO
PE=3 SV=2
Length = 452
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 77 WLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEVVDTVGVTALPSEDSVS 136
+LDL L HS P L ++R + G + + ++ +LPD V+ T + P E
Sbjct: 255 YLDLPLQHSHPEILKAMNRPW--QGNVN-DRIIEKLKEALPDAVLRTTFIAGFPGE--TE 309
Query: 137 ERRRKLEYLAMQEEL 151
E R L+ + E
Sbjct: 310 EHFRHLQQFIQRHEF 324
>sp|Q935Y2|RIMO_SYNE7 Ribosomal protein S12 methylthiotransferase RimO OS=Synechococcus
elongatus (strain PCC 7942) GN=rimO PE=3 SV=1
Length = 452
Score = 29.6 bits (65), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 77 WLDLSLNHSVPSSLLILSRAFTVSGKLRPEEAVQATLSSLPDEVVDTVGVTALPSEDSVS 136
+LDL L HS P L ++R + G + + ++ +LPD V+ T + P E
Sbjct: 255 YLDLPLQHSHPEILKAMNRPW--QGNVN-DRIIEKLKEALPDAVLRTTFIAGFPGE--TE 309
Query: 137 ERRRKLEYLAMQEEL 151
E R L+ + E
Sbjct: 310 EHFRHLQQFIQRHEF 324
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,199,600
Number of Sequences: 539616
Number of extensions: 2271099
Number of successful extensions: 8628
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 8547
Number of HSP's gapped (non-prelim): 115
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)