BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038597
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49484|ASK11_ARATH SKP1-like protein 11 OS=Arabidopsis thaliana GN=ASK11 PE=1 SV=1
Length = 152
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 100/158 (63%), Gaps = 9/158 (5%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKC 61
++ + L S D + FEVE+ V IQS TI +M+EDD IPL + S+ L KV+E+CK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
H D N EE+ W++KF + ++ F L+LAANYL I +LL CQ
Sbjct: 61 KHHVDEAN----PISEEDLNNWDEKF---MDLEQSTIFELILAANYLNIKSLLDLTCQTV 113
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
AD++KGKTPEEIR TFNI+ DFTPEEEEAV E+ WAF
Sbjct: 114 ADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAF 151
>sp|O65674|ASK12_ARATH SKP1-like protein 12 OS=Arabidopsis thaliana GN=ASK12 PE=1 SV=1
Length = 152
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 100/158 (63%), Gaps = 9/158 (5%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKC 61
++ + L S D + FEVE+ V IQS TI +M+EDD IPL + S+ L KV+E+CK
Sbjct: 2 SSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCK- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
H D N EE+ +W++KF + ++ F L+LAANYL I +L CQ
Sbjct: 61 KYHVDEAN----PISEEDLNKWDEKF---MDLEQSTIFELILAANYLNIKSLFDLTCQTV 113
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
AD++KGKTPEEIR TFNI+ DFTPEEEEAV E+ WAF
Sbjct: 114 ADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAF 151
>sp|Q9LNT9|ASK4_ARATH SKP1-like protein 4 OS=Arabidopsis thaliana GN=ASK4 PE=1 SV=1
Length = 163
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 97/162 (59%), Gaps = 8/162 (4%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKC 61
T + L+S D E FE+E+ V ++S TI++MIEDD AD IPL ++ LAKV+E+CK
Sbjct: 4 TKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKK 63
Query: 62 MQHRDRNNNND----NKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRL 117
D E +E + W+ +F V D+ F L+LAANYL I LL
Sbjct: 64 HVEAAAEAGGDKDFYGSAENDELKNWDSEF---VKVDQPTLFDLILAANYLNIGGLLDLT 120
Query: 118 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
C+ AD ++GKTPE++R FNIK D+TPEEE V +E+ WAF
Sbjct: 121 CKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAF 162
>sp|Q9FHW7|SKP1B_ARATH SKP1-like protein 1B OS=Arabidopsis thaliana GN=SKP1B PE=1 SV=1
Length = 171
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 108/175 (61%), Gaps = 21/175 (12%)
Query: 1 MATTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWC 59
M+T + L+S D E FE+++ V ++S TI++MIEDD D IPL ++S+ L+KV+E+C
Sbjct: 1 MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYC 60
Query: 60 KCMQHRDRNNNND---------------NKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLA 104
K +H + ++ + +E+ + W+ +F + D+ F L+LA
Sbjct: 61 K--RHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEF---IKVDQGTLFDLILA 115
Query: 105 ANYLEIPALLHRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
ANYL I LL CQ AD++KGKTPEEIR+TFNIK DFTPEEEE V E+ WAF
Sbjct: 116 ANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAF 170
>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
discoideum GN=fpaB-1 PE=1 SV=1
Length = 162
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPL-QISSRNLAKVVEWCKCM 62
S VKL S D +VFE+EK++ S TI+NMIED +D IPL ++S L KV+++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDAPIPLPNVTSTILEKVLDYCR-H 60
Query: 63 QHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLAA 122
H+ + D+K++E+ ++ + D+ F L+LAANYL+I LL C+ A
Sbjct: 61 HHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVA 120
Query: 123 DIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
++++GKTPEEIR+ FNIK DFTPEEEE + E+ W
Sbjct: 121 NMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
discoideum GN=fpaA PE=1 SV=1
Length = 162
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 100/156 (64%), Gaps = 3/156 (1%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPL-QISSRNLAKVVEWCKCM 62
S VKL S D +VFE+EK++ S TI+NMIED +D IPL ++S L KV+++C+
Sbjct: 2 SLVKLESSDEKVFEIEKEIACMSVTIKNMIEDIGESDSPIPLPNVTSTILEKVLDYCR-H 60
Query: 63 QHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLAA 122
H+ + D+K++E+ ++ + D+ F L+LAANYL+I LL C+ A
Sbjct: 61 HHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLDIKPLLDVTCKTVA 120
Query: 123 DIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
++++GKTPEEIR+ FNIK DFTPEEEE + E+ W
Sbjct: 121 NMIRGKTPEEIRKIFNIKNDFTPEEEEQIRKENEWC 156
>sp|Q39255|SKP1A_ARATH SKP1-like protein 1A OS=Arabidopsis thaliana GN=SKP1A PE=1 SV=1
Length = 160
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 101/159 (63%), Gaps = 11/159 (6%)
Query: 7 VKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKCMQHR 65
+ L+S D E FEVE+ V ++S TI +M+EDD D +PL ++S+ LAKV+E+CK +H
Sbjct: 6 IVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCK--RHV 63
Query: 66 DRNNNNDNKEE-----EEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQL 120
+ + E +++ + W+ F + D+ F L+LAANYL I LL CQ
Sbjct: 64 EAAASKAEAVEGAATSDDDLKAWDADF---MKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 121 AADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
AD++KGKTPEEIR TFNIK DFTPEEEE V E+ WAF
Sbjct: 121 VADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAF 159
>sp|Q9SL93|ASK3_ARATH SKP1-like protein 3 OS=Arabidopsis thaliana GN=ASK3 PE=1 SV=1
Length = 163
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 91/162 (56%), Gaps = 8/162 (4%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKC 61
T + L+S D E FEVE+ V ++S TI++MIEDD D IPL ++ LAKV+E+CK
Sbjct: 4 TKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNGIPLPNVTGAILAKVIEYCKK 63
Query: 62 MQHRDRNNNND----NKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRL 117
D E E + W+ F V D F LL AANYL I LL
Sbjct: 64 HVEAAAEAGGDKDFYGSTENHELKTWDNDF---VKVDHPTLFDLLRAANYLNISGLLDLT 120
Query: 118 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
C+ AD ++GKTP ++R FNIK D+TPEEE V +E+ WAF
Sbjct: 121 CKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNENRWAF 162
>sp|C5FHU9|SKP1_ARTOC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
(strain ATCC MYA-4605 / CBS 113480) GN=sconC PE=3 SV=1
Length = 165
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 108/167 (64%), Gaps = 14/167 (8%)
Query: 1 MATTSTVK--LRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPL-QISSRNLAKVV 56
MA T+T K L S D +E+QV +S I+NM+ED GE IP+ ++ L KV+
Sbjct: 1 MAATATSKITLTSSDGVEITIERQVAERSILIKNMLEDLGDSGEAIPIPNVNESVLKKVI 60
Query: 57 EWCKCMQHRD-----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIP 111
EWCK H+ +++ D++ + + +EW++KF + D+++ F ++LAANYL+I
Sbjct: 61 EWCK--HHKGDPPSTGDDDVDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIK 115
Query: 112 ALLHRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
ALL C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 116 ALLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|D4ARL8|SKP1_ARTBC E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma
benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=sconC
PE=3 SV=1
Length = 164
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 107/166 (64%), Gaps = 12/166 (7%)
Query: 1 MATTST--VKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQISSRN---LAKV 55
MA+T+T + L S D +E+QV +S I+NM+ED GE P+ I + N L KV
Sbjct: 1 MASTATNKITLTSSDGVEVTIERQVAERSILIKNMLEDLGDSGE-PIPIPNVNESVLKKV 59
Query: 56 VEWC---KCMQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPA 112
+EWC K +++ D++ + + +EW++KF + D+++ F ++LAANYL+I A
Sbjct: 60 IEWCEHHKGDPPSTGDDDVDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKA 116
Query: 113 LLHRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
LL C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 LLDVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|Q8TGW7|SKP1_ARTOT E3 ubiquitin ligase complex SCF subunit sconC OS=Arthroderma otae
GN=sconC PE=2 SV=1
Length = 165
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 106/164 (64%), Gaps = 12/164 (7%)
Query: 2 ATTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPL-QISSRNLAKVVEWC 59
A TS + L S D +++QV +S I+NM++D GE IP+ ++ L KV+EWC
Sbjct: 4 AATSKITLTSSDGVDITIDRQVAERSILIKNMLKDLGDSGEAIPIPNVNESVLKKVIEWC 63
Query: 60 KCMQHRD-----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALL 114
K H+ +++ D++ + + +EW++KF + D+++ F ++LAANYL+I ALL
Sbjct: 64 K--HHKGDPPSTGDDDVDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALL 118
Query: 115 HRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 119 DVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 162
>sp|A1C9U5|SKP1_ASPCL E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=sconC PE=3 SV=1
Length = 159
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 105/161 (65%), Gaps = 11/161 (6%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPL-QISSRNLAKVVEWCKC 61
++TV L S D V++ V +S I+NM+ED GE IP+ ++ L KV+EWC
Sbjct: 2 STTVTLTSSDGVDLTVDRDVAERSVLIKNMLEDLGESGEAIPIPNVNEVVLKKVIEWCT- 60
Query: 62 MQHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRL 117
H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I ALL
Sbjct: 61 -HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVG 116
Query: 118 CQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 CKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|B6QGB9|SKP1_PENMQ E3 ubiquitin ligase complex SCF subunit sconC OS=Penicillium
marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
GN=sconC PE=3 SV=1
Length = 160
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 104/160 (65%), Gaps = 9/160 (5%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQISSRN---LAKVVEWCK 60
+ V L+S D+ VE+ V +S I+N++ED + E P+ I + N L KV+EWC
Sbjct: 2 SGQVTLQSSDSVDITVERAVAERSMLIKNLLED-LGESEEPVPIPNVNESVLKKVIEWCT 60
Query: 61 CMQHRDRNN--NNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
++ ++ ++DN+ E +EW++KF + D+++ F ++LAANYL+I ALL C
Sbjct: 61 HHKNDPQSTGEDDDNRRRTTEIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 117
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 118 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|Q0CA59|SKP1_ASPTN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=sconC PE=3
SV=1
Length = 161
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 105/164 (64%), Gaps = 11/164 (6%)
Query: 1 MATTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPL-QISSRNLAKVVEW 58
M+T+ T+ S D V++ V +S I+NM+ED GE IP+ ++ L KV+EW
Sbjct: 1 MSTSPTLVFTSSDGVDITVDRDVAERSLLIKNMLEDLGETGEAIPIPNVNEAVLKKVIEW 60
Query: 59 CKCMQHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALL 114
C H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I LL
Sbjct: 61 C--THHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKGLL 115
Query: 115 HRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 116 DVGCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 159
>sp|Q5KU00|SKP1_ASPOR E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=sconC PE=3 SV=1
Length = 161
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 13/162 (8%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQISSRN---LAKVVEWCK 60
T T+ S D VE+ V +S I+NM+ED GE P+ I + N L KV+EWC
Sbjct: 3 TPTLTFTSSDGVDIPVERDVAERSQLIKNMLEDLGETGE-PIPIPNVNEAVLKKVIEWC- 60
Query: 61 CMQHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHR 116
H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I LL
Sbjct: 61 -THHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKGLLDV 116
Query: 117 LCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 GCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|B8NSJ0|SKP1_ASPFN E3 ubiquitin ligase complex SCF subunit sconC OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=sconC PE=3 SV=1
Length = 161
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 13/162 (8%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQISSRN---LAKVVEWCK 60
T T+ S D VE+ V +S I+NM+ED GE P+ I + N L KV+EWC
Sbjct: 3 TPTLTFTSSDGVDIPVERDVAERSQLIKNMLEDLGETGE-PIPIPNVNEAVLKKVIEWC- 60
Query: 61 CMQHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHR 116
H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I LL
Sbjct: 61 -THHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKGLLDV 116
Query: 117 LCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 GCKTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|O81057|ASK14_ARATH SKP1-like protein 14 OS=Arabidopsis thaliana GN=ASK14 PE=1 SV=1
Length = 149
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 12/158 (7%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCKC 61
+++ + L S D E FEVE+ V + + +MIEDD E+PLQ ++ + L+ VVE+CK
Sbjct: 2 SSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCK- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
+H + ++ E + +EE+ KKFD+ F LLLAANYL I LL Q
Sbjct: 61 -KHV---VDEESDEFKTWDEEFMKKFDQPTV------FQLLLAANYLNIKGLLDLSAQTV 110
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
AD +K KTPEEIR FNI+ DFTPEEE AV E+ WAF
Sbjct: 111 ADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAF 148
>sp|B8MDP8|SKP1_TALSN E3 ubiquitin ligase complex SCF subunit sconC OS=Talaromyces
stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 /
NRRL 1006) GN=sconC PE=3 SV=1
Length = 160
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 101/160 (63%), Gaps = 9/160 (5%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQISSRN---LAKVVEWCK 60
+ V L+S D VE+ V +S I+N++ED + E P+ I + N L KV+EWC
Sbjct: 2 SGQVTLQSSDQVNITVERAVAERSMLIKNLLED-LGESEEPVPIPNVNESVLKKVIEWCT 60
Query: 61 CMQHRDRNNN--NDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
++ + +DN+ E +EW++KF + D+++ F ++LAANYL+I ALL C
Sbjct: 61 HHKNDPQTTGEEDDNRRRTTEIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 117
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 118 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 157
>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
PE=2 SV=3
Length = 163
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
T+KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 TIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
SV=3
Length = 163
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
T+KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 TIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|A1CZG3|SKP1_NEOFI E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=sconC PE=3 SV=1
Length = 158
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPL-QISSRNLAKVVEWCKCM 62
+TV L S D V++ V +S I+NM+ED +D IP+ ++ L KV+EWC
Sbjct: 2 TTVTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCT-- 59
Query: 63 QHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I ALL C
Sbjct: 60 HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 116
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 156
>sp|Q4WTT8|SKP1_ASPFU E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=sconC PE=3 SV=1
Length = 158
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPL-QISSRNLAKVVEWCKCM 62
+TV L S D V++ V +S I+NM+ED +D IP+ ++ L KV+EWC
Sbjct: 2 TTVTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCT-- 59
Query: 63 QHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I ALL C
Sbjct: 60 HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 116
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 156
>sp|B0Y3B5|SKP1_ASPFC E3 ubiquitin ligase complex SCF subunit sconC OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=sconC PE=3 SV=1
Length = 158
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 104/160 (65%), Gaps = 11/160 (6%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPL-QISSRNLAKVVEWCKCM 62
+TV L S D V++ V +S I+NM+ED +D IP+ ++ L KV+EWC
Sbjct: 2 TTVTLTSSDGVDITVDRDVAERSILIKNMLEDLGESDEAIPIPNVNEVVLKKVIEWCT-- 59
Query: 63 QHRD----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
H++ +++D++ + + +EW++KF + D+++ F ++LAANYL+I ALL C
Sbjct: 60 HHKNDPPSTGDDDDSRRKTTDIDEWDQKF---MQVDQEMLFEIILAANYLDIKALLDVGC 116
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
+ A+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 117 KTVANMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 156
>sp|Q8NK13|SKP1_NEUCR E3 ubiquitin ligase complex SCF subunit scon-3 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=scon-3 PE=1 SV=1
Length = 171
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 102/162 (62%), Gaps = 15/162 (9%)
Query: 7 VKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADG----EIPL-QISSRNLAKVVEWCKC 61
V L+S D ++ V++ V +S I+N+IED + IPL ++ L KVVEWC+
Sbjct: 12 VSLQSNDGQIITVDRVVAERSLLIKNLIEDLGDEAVMNEAIPLPNVNEPVLRKVVEWCE- 70
Query: 62 MQHRD-----RNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHR 116
HR + ND++++ E +EW++KF + D+++ F ++LAANY++I LL
Sbjct: 71 -HHRKDPPQTTEDENDSRKKSTEIDEWDQKF---MQVDQEMLFEIILAANYMDIKPLLDV 126
Query: 117 LCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGK+PEEIR+TFNI DFTPEEEE + E+ WA
Sbjct: 127 GCKTVANMIKGKSPEEIRKTFNITNDFTPEEEEQIRRENEWA 168
>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
Length = 161
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 104/163 (63%), Gaps = 15/163 (9%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDA-ADGEIPL-QISSRNLAKVVEWCKCM 62
S +KL S DNE F V++ + +S I+NM+ED + IPL +SS L KV+EWC
Sbjct: 2 SKIKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEINVPIPLPNVSSNVLRKVLEWC--- 58
Query: 63 QHRDRNNNNDNKEEEE-------EEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
+H + + +EE + + +EW++KF ++ D+++ F ++LA+NYL+I LL
Sbjct: 59 EHHKNDLYSGTEEESDIRLKKSTDIDEWDRKF---MAVDQEMLFEIVLASNYLDIKPLLD 115
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A++++GK+PE+IR+TFNI DFTPEEEE + E+ WA
Sbjct: 116 TGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWA 158
>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
SV=3
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
SV=1
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
PE=2 SV=1
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
SV=2
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
SV=1
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
SV=2
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
Length = 163
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 101/163 (61%), Gaps = 15/163 (9%)
Query: 6 TVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-----IPL-QISSRNLAKVVEWC 59
++KL+S D E+FEV+ ++ QS TI+ M+ED D E +PL +++ L KV++WC
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWC 62
Query: 60 KCMQHRDRNNNNDNKEEEEEEEE----WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLH 115
H+D ++ E +E+ + W+++F + D+ F L+LAANYL+I LL
Sbjct: 63 --THHKDDPPPPEDDENKEKRTDDIPVWDQEF---LKVDQGTLFELILAANYLDIKGLLD 117
Query: 116 RLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
C+ A+++KGKTPEEIR+TFNIK DFT EEE V E+ W
Sbjct: 118 VTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWC 160
>sp|O81055|ASK16_ARATH SKP1-like protein 16 OS=Arabidopsis thaliana GN=ASK16 PE=1 SV=1
Length = 170
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 12/169 (7%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCK- 60
+++ + L S D+E FEVE+ V + I +MI+DD AD IPL+ ++ LA V+E+CK
Sbjct: 2 SSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKK 61
Query: 61 --------CMQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPA 112
+ + N N+E + E W+ +F +E D + L+LA NYL +
Sbjct: 62 HVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEF--DMETVMKLILAVNYLNVQD 119
Query: 113 LLHRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAFHD 161
LL CQ AD +K +PEE+R FNI+ D+TPEEE+A+ E+ WAF D
Sbjct: 120 LLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFED 168
>sp|Q9M1X5|ASK13_ARATH SKP1-like protein 13 OS=Arabidopsis thaliana GN=ASK13 PE=1 SV=1
Length = 154
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 97/157 (61%), Gaps = 6/157 (3%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKCM 62
+ V L S D E F+VE+ V +QS TI +MIEDD +P+ ++ L+KV+E+CK
Sbjct: 2 SKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCK-- 59
Query: 63 QHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLAA 122
+ +++ +E ++E ++W+ +F + + + L F ++LAANYL I LL CQ A
Sbjct: 60 --KHVVSDSPTEESKDELKKWDAEFMKALEQSSTL-FDVMLAANYLNIKDLLDLGCQTVA 116
Query: 123 DIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
D++ GK P+EIR I+ DFTPEEEE + E+ WAF
Sbjct: 117 DMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAF 153
>sp|Q9LSX8|ASK10_ARATH SKP1-like protein 10 OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=1
Length = 152
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 9/158 (5%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKC 61
+T + L+S D FEVE++ Q TI +M EDD D IPL +++ + L V+E+C
Sbjct: 2 STKKIILKSSDGHSFEVEEEAACQCQTIAHMSEDDCTDNGIPLPEVTGKILEMVIEYCN- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
H D N +E+ ++W+K+F E+ + F L++AANYL I +LL CQ
Sbjct: 61 KHHVDAANPC----SDEDLKKWDKEFMEKY---QSTIFDLIMAANYLNIKSLLDLACQTV 113
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
AD++K T E R+ FNI+ D+T EEEEAV E+ W F
Sbjct: 114 ADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQWGF 151
>sp|Q5BAX8|SKP1_EMENI E3 ubiquitin ligase complex SCF subunit sconC OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=sconC PE=3 SV=2
Length = 161
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 99/156 (63%), Gaps = 11/156 (7%)
Query: 9 LRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGE-IPLQISSRN-LAKVVEWCKCMQHRD 66
+ S D + EV + V +S I+NM+ED E IP+ S N L+KV+EWC HR+
Sbjct: 8 MTSNDGKNIEVPRDVAERSLLIKNMLEDLGDPTEPIPIPNVSENVLSKVLEWCA--HHRN 65
Query: 67 RNNNNDN----KEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLAA 122
++ + + + + EEW++KF + D+++ F ++LAANYL+I LL C+ A
Sbjct: 66 DPPSSADDDDSRRKTTDIEEWDQKF---MQVDQEMLFEIILAANYLDIKPLLDIGCKTVA 122
Query: 123 DIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWA 158
+++KGK+PEEIR+TFNI+ DFTPEEE+ + E+ WA
Sbjct: 123 NMIKGKSPEEIRKTFNIQNDFTPEEEDQIRRENEWA 158
>sp|Q9LSX9|ASK9_ARATH SKP1-like protein 9 OS=Arabidopsis thaliana GN=ASK9 PE=1 SV=1
Length = 153
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 92/159 (57%), Gaps = 10/159 (6%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTI-RNMIEDDAADGEIPL-QISSRNLAKVVEWCK 60
+T + L+S D FEVE++ Q I +M E+D D IPL ++ + LA V+E+C
Sbjct: 2 STKKIILKSSDGHSFEVEEEAARQCQIIIAHMSENDCTDNGIPLPNVTGKILAMVIEYCN 61
Query: 61 CMQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQL 120
H D N +++ ++W+K+F E+ D F L+ AANYL I +L CQ
Sbjct: 62 -KHHVDAAN----PCSDDDLKKWDKEFMEK---DTSTIFDLIKAANYLNIKSLFDLACQT 113
Query: 121 AADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
A+I+KG TPE+IR FNI+ D TPEEE A+ E+ WAF
Sbjct: 114 VAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWAF 152
>sp|Q9LSY1|ASK8_ARATH SKP1-like protein 8 OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=1
Length = 152
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI-PLQISSRNLAKVVEWCKC 61
+T + L+S + + FE+E++ Q TI +MIE + D I L+++S L V+E+C
Sbjct: 2 STKKIMLKSSEGKTFEIEEETARQCQTIAHMIEAECTDNVILVLKMTSEILEMVIEYCN- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
H D N +++ E+W+K+F E+ DK F L AAN+L +LLH Q
Sbjct: 61 KHHVDAANPCS----DDDLEKWDKEFMEK---DKSTIFALTNAANFLNNKSLLHLAGQTV 113
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAF 159
AD++KG TP+++R FNI+ D TPEEE A+ E+ WAF
Sbjct: 114 ADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWAF 151
>sp|Q9M1X4|ASK5_ARATH SKP1-like protein 5 OS=Arabidopsis thaliana GN=ASK5 PE=1 SV=1
Length = 153
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 97/163 (59%), Gaps = 17/163 (10%)
Query: 4 TSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCKCM 62
++ + L+S D + FE+++ V +S I +M+ED A IPL+ ++S+ L V+++C+
Sbjct: 2 STKIMLKSSDGKSFEIDEDVARKSIAINHMVEDGCATDVIPLRNVTSKILKIVIDYCE-- 59
Query: 63 QHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQ--- 119
+H +EEE+ +EW+ F + + + + F +++AANYL I +LL C+
Sbjct: 60 KHV-------KSKEEEDLKEWDADFMKTI--ETTILFDVMMAANYLNIQSLLDLTCKTVS 110
Query: 120 --LAADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAFH 160
L AD++ GKTP+EIR FNI+ D T EE + +E+ WAF
Sbjct: 111 DLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWAFQ 153
>sp|Q1PEL7|ASK15_ARATH SKP1-like protein 15 OS=Arabidopsis thaliana GN=ASK15 PE=2 SV=2
Length = 177
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 16/169 (9%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCKC 61
+++ + L S D E F+VE+ V + +++++EDD EIPLQ ++ L+ V+E+CK
Sbjct: 2 SSNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINEIPLQNVTGNILSIVLEYCK- 60
Query: 62 MQHRDRNNNNDNKEEEEEE----------EEWEKKFDEEVSEDKDLHFGLLLAANYLEIP 111
+H D ++D EE +++ + W+ +F + + D + F L+LAANYL +
Sbjct: 61 -KHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKNI--DMETIFKLILAANYLNVE 117
Query: 112 ALLHRLCQLAADIVKGKTPEEIRRTFNIKKDFT-PEEEEAVMDEHGWAF 159
LL CQ AD +K KTPEE+R FNI+ DFT EEEEA+ E+ WAF
Sbjct: 118 GLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAIRKENAWAF 166
>sp|O81058|ASK19_ARATH SKP1-like protein 19 OS=Arabidopsis thaliana GN=ASK19 PE=1 SV=1
Length = 200
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 35/190 (18%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCK- 60
++ + L S D E F+VE+ V + + ++IEDD A +IP+ ++ LAKV+E+CK
Sbjct: 2 SSKKIVLTSSDGESFKVEEVVARKLQIVGHIIEDDCATNKIPIPNVTGEILAKVIEYCKK 61
Query: 61 -------CMQHRDRNNNNDNKEEE------------------------EEEEEWEKKFDE 89
++ + + D EE E+ EW+ KF +
Sbjct: 62 HVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEGDDEAEDKKEKLNEWDAKFMK 121
Query: 90 EVSEDKDLHFGLLLAANYLEIPALLHRLCQLAADIVKGKTPEEIRRTFNIKKDFTPEEEE 149
+ D F ++LAANYL + L + AD +K TPEE+R FNI+ DFTPEEEE
Sbjct: 122 DF--DIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPEEVRELFNIENDFTPEEEE 179
Query: 150 AVMDEHGWAF 159
A+ +E+ W F
Sbjct: 180 AIRNENAWTF 189
>sp|Q9SY65|ASK18_ARATH SKP1-like protein 18 OS=Arabidopsis thaliana GN=ASK18 PE=1 SV=2
Length = 158
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCKC 61
+++ + L S D E FE+++ V + I +M+ED+ A IPL+ ++ L+K++E+ K
Sbjct: 2 SSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEAIPLENVTGDILSKIIEYAK- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
M + + ++++E ++ + W+ KF E++ D + F ++LAANYL LL Q
Sbjct: 61 MHVNEPSEEDEDEEAKKNLDSWDAKFMEKL--DLETIFKIILAANYLNFEGLLGFASQTV 118
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAFHD 161
AD +K KTPEE+R FNI+ DFTPEEEE + E+ W F++
Sbjct: 119 ADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAWTFNE 158
>sp|P52286|SKP1_YEAST Suppressor of kinetochore protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SKP1 PE=1 SV=2
Length = 194
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 46/196 (23%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEI------------------- 43
TS V L SG+ E F V+K++ +S ++N + +D D +
Sbjct: 2 VTSNVVLVSGEGERFTVDKKIAERSLLLKNYL-NDMHDSNLQNNSDSESDSDSETNHKSK 60
Query: 44 -----------------PL-QISSRNLAKVVEWCKCMQHRDRN---NNNDNKEEEEEEEE 82
P+ + S L KV+EW + HRD N ++D+ + +
Sbjct: 61 DNNNGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAE--HHRDSNFPDEDDDDSRKSAPVDS 118
Query: 83 WEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLAADIVKGKTPEEIRRTFNIKKD 142
W+++F + D+++ + ++LAANYL I LL C++ A++++G++PEEIRRTFNI D
Sbjct: 119 WDREF---LKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVND 175
Query: 143 FTPEEEEAVMDEHGWA 158
FTPEEE A+ E+ WA
Sbjct: 176 FTPEEEAAIRRENEWA 191
>sp|Q9SL65|ASK17_ARATH SKP1-like protein 17 OS=Arabidopsis thaliana GN=ASK17 PE=1 SV=1
Length = 150
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 11/159 (6%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCKC 61
++ + L S D+E FE+++ V + + +MI+DD AD I LQ ++ + LA ++E+CK
Sbjct: 2 SSKKIVLTSSDDECFEIDEAVARKMQMVAHMIDDDCADKAIRLQNVTGKILAIIIEYCK- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
+H D + E + E W+ +F + + D D F LL AA+YL + L + + Q
Sbjct: 61 -KHVD------DVEAKNEFVTWDAEFVKNI--DMDTLFKLLDAADYLIVIGLKNLIAQAI 111
Query: 122 ADIVKGKTPEEIRRTFNIKKDFTPEEEEAVMDEHGWAFH 160
AD KT EIR FNI+ D+TPEEEE + ++ WAF+
Sbjct: 112 ADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWAFN 150
>sp|Q9LSY0|ASK7_ARATH SKP1-like protein 7 OS=Arabidopsis thaliana GN=ASK7 PE=2 SV=1
Length = 125
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 3 TTSTVKLRSGDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPLQ-ISSRNLAKVVEWCKC 61
+T + L+S D ++FE+E++ Q TI +MIE + D IP+ ++S L V+E+C
Sbjct: 2 STKKIMLKSSDGKMFEIEEETARQCQTIAHMIEAECTDNVIPVSNVTSEILEMVIEYCN- 60
Query: 62 MQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLCQLA 121
H D N +E+ ++W+K+F E +D+ F L+ AA L I +LL Q
Sbjct: 61 KHHVDAANPC----SDEDLKKWDKEFME---KDQYTIFHLMNAAYDLHIKSLLALAYQTV 113
Query: 122 ADIV 125
AD+V
Sbjct: 114 ADMV 117
>sp|Q1PEF6|ASK6_ARATH SKP1-like protein 6 OS=Arabidopsis thaliana GN=ASK6 PE=3 SV=1
Length = 85
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 12/86 (13%)
Query: 30 IRNMIEDDAADGEIPL-QISSRNLAKVVEWCKCMQHRDRNNNNDNKEEEEEEEEWEKKFD 88
I+ M EDD AD IPL ++S+ L V+E+CK +H + +EE+ ++W+ +F
Sbjct: 3 IKGMAEDDCADNGIPLPNVTSKILLLVIEYCK--KHVVES-------KEEDLKKWDAEFM 53
Query: 89 EEVSEDKDLHFGLLLAANYLEIPALL 114
+++ ++ + F +++AANYL I +LL
Sbjct: 54 KKM--EQSILFDVMMAANYLNIQSLL 77
>sp|Q8LF97|ASK21_ARATH SKP1-like protein 21 OS=Arabidopsis thaliana GN=ASK21 PE=2 SV=1
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTI-RNMIEDDAADGE-----IPLQISSRNLAKVVEW 58
S + L + D + +VE++V + I + +I+ + +P +++ L+ + ++
Sbjct: 16 SYIWLETADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNYAISLPQRVNPAMLSLIFDY 75
Query: 59 CKCMQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
C+ Q R+N +E + +++KF + D L AA+ L++ L+
Sbjct: 76 CRFHQVPGRSN--------KERKVYDEKF---IRMDTKRLCELTSAADSLQLKPLVDLTS 124
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEE 148
+ A I++GKTPEEIR F++ D T EE+
Sbjct: 125 RALARIIEGKTPEEIREIFHLPDDLTEEEK 154
>sp|A8MQG7|ASK20_ARATH SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 PE=2 SV=1
Length = 352
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 75/150 (50%), Gaps = 17/150 (11%)
Query: 5 STVKLRSGDNEVFEVEKQVMIQSGTI-RNMIEDDAADGE-----IPLQISSRNLAKVVEW 58
S + L++ D + +VE++V + I + +I+ + +P +++ + ++++
Sbjct: 16 SYIWLQTADGSIQQVEQEVAMFCPMICQEVIQKGVGSSKNHAISLPQRVNPAMFSLILDY 75
Query: 59 CKCMQHRDRNNNNDNKEEEEEEEEWEKKFDEEVSEDKDLHFGLLLAANYLEIPALLHRLC 118
C+ Q R+N +E + ++++F + D L AA+ L++ L+
Sbjct: 76 CRFHQLPGRSN--------KERKTYDERF---IRMDTKRLCELTSAADSLQLKPLVDLTS 124
Query: 119 QLAADIVKGKTPEEIRRTFNIKKDFTPEEE 148
+ A I++GK PEEIR F++ D T EE+
Sbjct: 125 RALARIIEGKNPEEIREIFHLPDDLTEEEK 154
>sp|Q6FVV7|RRT5_CANGA Regulator of rDNA transcription protein 5 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=RRT5 PE=3 SV=1
Length = 443
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 12 GDNEVFEVEKQVMIQSGTIRNMIEDDAADGEIPL-QISSRNLAKVVEWCKCMQHRDRNNN 70
G N EV Q S +I N+ E + G+ P+ ++ SRN K+V +N
Sbjct: 318 GSNPEIEVSNQ---NSSSIANVAETNGNVGDTPITKLDSRNNIKIVNIGNPQDKTKKNQP 374
Query: 71 NDNKE 75
NDNKE
Sbjct: 375 NDNKE 379
>sp|Q9VEA5|RPB4_DROME DNA-directed RNA polymerase II 16 kDa polypeptide OS=Drosophila
melanogaster GN=Rpb4 PE=2 SV=5
Length = 139
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Query: 32 NMIEDDAADGEIPLQISSRNLAKVVEWCKCMQHRDRNNNNDNKEEEEEEEEWEKKFDEEV 91
+M+++DAAD + P + + + E + HR R N + + EE+E E + K +
Sbjct: 8 DMVDEDAADLQFPKEFENAETLLISEVHMLLDHRKRQNESAD-EEQEFSEVFMKTYAYTD 66
Query: 92 SEDKDLHFGLLLAANYLEIPALLHRLCQLAADIVKGKTPEEIRRTF-NIKKDFTPEEEEA 150
S K + +++A L + LH+ A + + PEE + +++ F EE
Sbjct: 67 SFRKFKNKETIMSARSLLMQKKLHKFELAALGNLCPEAPEEAKALIPSLEGRFEDEELRQ 126
Query: 151 VMDEHG 156
++D+ G
Sbjct: 127 ILDDIG 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,901,454
Number of Sequences: 539616
Number of extensions: 2836914
Number of successful extensions: 38658
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 145
Number of HSP's that attempted gapping in prelim test: 30355
Number of HSP's gapped (non-prelim): 5490
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)