BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038598
(392 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/387 (30%), Positives = 174/387 (44%), Gaps = 57/387 (14%)
Query: 22 NVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVE 81
+++ Y N P + Y V P KTY +R+ +T L F+I NH L VVE
Sbjct: 181 SIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE 240
Query: 82 ADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGT---FDNSTVA 138
AD YV+PF T+ + I G++ +VL+ T+ NP + Y+ +GT N+
Sbjct: 241 ADGNYVQPFYTSDIDIYSGESYSVLITTDQNP--------SENYWVSVGTRARHPNTPPG 292
Query: 139 AILEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRF 198
L P+ + T P PA +D + NF+ + + + P P ++R
Sbjct: 293 LTLLNYLPNSVSKLP--TSPPPQTPAWDDFDRSKNFTYRITAAMGSPKP---PVKFNRRI 347
Query: 199 FFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQ 258
F Q A+N+VS ALP T Y A + A F Q
Sbjct: 348 FLL------------NTQNVINGYVKWAINDVSLALPPTP----YLGAMKYNLLHA-FDQ 390
Query: 259 FP---LHPFNY-TGTPPNN--TFVSNGT------KALDTSILGA--------ESHPLHLH 298
P + P +Y TPP N T + NG + +D + A E+HP HLH
Sbjct: 391 NPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLH 450
Query: 299 GYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVWFMHCHF 358
G++ +V+G G G F + + NL +P RNTV + GW AIRF+ADNPGVW HCH
Sbjct: 451 GHDFWVLGYGDGKFSAEEE-SSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHI 509
Query: 359 DVHLSWGLRMAW---IVLDGELPNQKL 382
+ HL G+ + + + G +P + L
Sbjct: 510 EPHLHMGMGVVFAEGVEKVGRIPTKAL 536
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 147/355 (41%), Gaps = 61/355 (17%)
Query: 29 FNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVK 88
NGL + N SA + V+ GK Y R+++T+ FSI H +TV+E D + +
Sbjct: 196 INGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSHQ 255
Query: 89 PFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAPSQ 148
P + L I GQ +V+++ N N +++ A P G F +AI Y Q
Sbjct: 256 PLTVDSLTIFAGQRYSVVVEANQAVGN--YWIRANPS-NGRNGFTGGINSAIFRY----Q 308
Query: 149 DNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPAN-VPQTVDKRFFFTVSLGAN 207
+ T + S A+N+ N + L N P N VP D +
Sbjct: 309 GAAVAEPTTSQNSGTALNEANLIP--------LINPGAPGNPVPGGADINLNLRI----- 355
Query: 208 PCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHPFNYT 267
G N T +N F P+ +L GV + L P
Sbjct: 356 ---------GRNATTADFTINGAPFIPPTVPVLLQIL----SGVTNPN----DLLPGGAV 398
Query: 268 GTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKK--FNLID 325
+ P N + ++ SI G +HP HLHG+N FD P +N ++
Sbjct: 399 ISLPAN-------QVIEISIPGGGNHPFHLHGHN----------FDVVRTPGSSVYNYVN 441
Query: 326 PVERNTVGVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPN 379
PV R+ V + GG V RF+ DNPG WF+HCH D HL GL +V ++PN
Sbjct: 442 PVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLA---VVFAEDIPN 493
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 151/367 (41%), Gaps = 65/367 (17%)
Query: 21 PNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV 80
P +++ NGL G + + D + V GK Y RL++ + + FSI +H LTV+
Sbjct: 163 PKGADSTLINGL-GRSTSTPTADLAVISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVI 221
Query: 81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI 140
EAD + +P + + I Q + +L N + N +++ A P F G F + +AI
Sbjct: 222 EADGVSTQPVTVDSIQIFAAQRYSFVLNANQDVDN--YWIRANPNFGTTG-FADGVNSAI 278
Query: 141 LEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQ-----TVD 195
L Y+ P P N T + L + P N Q ++
Sbjct: 279 LRYDDA------------DPVEPVTNQTGTTLLLETDLHPLTSMPVPGNPTQGGADLNLN 326
Query: 196 KRFFFTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTAD 255
F F +GT F +N SF P+ +L G TA
Sbjct: 327 MAFNF------------------DGTNFF--INGESFTPPTVPVLLQII----SGANTAQ 362
Query: 256 FPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPK 315
L P + P+N+ + A T+ HP HLHG+ V+ V + G+
Sbjct: 363 ----DLLPSGSVYSLPSNSSIEITFPA--TTAAPGAPHPFHLHGH-VFAVVRSAGS---- 411
Query: 316 NDPKKFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIV 372
+N DPV R+ V G P G V IRF DNPG WF+HCH D HL G +V
Sbjct: 412 ---TSYNYDDPVWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFA---VV 465
Query: 373 LDGELPN 379
+ ++PN
Sbjct: 466 MAEDIPN 472
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 158/363 (43%), Gaps = 60/363 (16%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
S++ NGL G T + D +KV GK Y RL++ + + FSI NHT+T++EAD
Sbjct: 166 SDSTLINGL-GRTTGIAPSDLAVIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEAD 224
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEY 143
+I +P E + + I Q + +L + P ++++ A P F G F +AIL Y
Sbjct: 225 SINTQPLEVDSIQIFAAQRYSFVLDA--SQPVDNYWIRANPAFGNTG-FAGGINSAILRY 281
Query: 144 E-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPAN-VPQTVDKRFFFT 201
+ AP + + T KP +N+ + L+ P + P VDK
Sbjct: 282 DGAPEIEPTSVQTTPTKP----LNEVD--------LHPLSPMPVPGSPEPGGVDKPLNLV 329
Query: 202 VSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQFP 260
+ NGT F +N+ +F PS LLQ A++ + F
Sbjct: 330 FNF--------------NGTNF--FINDHTFVPPSVPVLLQILSGAQAAQDLVPEGSVFV 373
Query: 261 LHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKK 320
L P+N+ + A T+ HP HLHG+ VV +
Sbjct: 374 L---------PSNSSIEISFPA--TANAPGFPHPFHLHGHAFAVVRSAGSSV-------- 414
Query: 321 FNLIDPVERNTV--GVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELP 378
+N +P+ R+ V G P G V IRF +NPG WF+HCH D HL G +V+ + P
Sbjct: 415 YNYDNPIFRDVVSTGQP-GDNVTIRFETNNPGPWFLHCHIDFHLDAGFA---VVMAEDTP 470
Query: 379 NQK 381
+ K
Sbjct: 471 DTK 473
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 155/359 (43%), Gaps = 56/359 (15%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
++A NGL G + A D + V GK Y RL++ + + FSI H+LTV+EAD
Sbjct: 165 ADATLINGL-GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEAD 223
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEY 143
++ +KP + L I Q + +L + + N +++ A P +G F T +AIL Y
Sbjct: 224 SVNLKPHTVDSLQIFAAQRYSFVLNADQDVDN--YWIRALPN-SGTQNFAGGTNSAILRY 280
Query: 144 EAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVS 203
+ + ++T P+ N A + K + + P V ++ F F
Sbjct: 281 DGAAPVEPTTSQT------PSTNPLVESALTTLKGTAAPGSPTPGGVDLALNMAFGFA-- 332
Query: 204 LGANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQFPLH 262
G F +N SF P+ LLQ A+S AD L
Sbjct: 333 ----------------GGNF--TINGASFTPPTVPVLLQILSGAQSA----AD-----LL 365
Query: 263 PFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFN 322
P + P N + A T+ HP HLHG+ V+ V + G+ +N
Sbjct: 366 PAGSVYSLPANADIEISLPA--TAAAPGFPHPFHLHGH-VFAVVRSAGS-------STYN 415
Query: 323 LIDPVERNTV--GVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPN 379
+PV R+ V G P G V IRF DNPG WF+HCH D HL G +V+ ++P+
Sbjct: 416 YANPVYRDVVSTGAP-GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA---VVMAEDIPD 470
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 155/359 (43%), Gaps = 56/359 (15%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
++A NGL G + A D + V GK Y RL++ + + FSI H+LTV+EAD
Sbjct: 165 ADATLINGL-GRSAATLAADLAVITVTKGKRYRFRLVSLSCDPNYTFSIDGHSLTVIEAD 223
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEY 143
++ +KP + L I Q + +L + + N +++ A P +G F T +AIL Y
Sbjct: 224 SVNLKPHTVDSLQIFAAQRYSFVLNADQDVDN--YWIRALPN-SGTQNFAGGTNSAILRY 280
Query: 144 EAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVS 203
+ + ++T P+ N A + K + + P V ++ F F
Sbjct: 281 DGAAPVEPTTSQT------PSTNPLVESALTTLKGTAAPGSPTPGGVDLALNMAFGFA-- 332
Query: 204 LGANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQFPLH 262
G F +N SF P+ LLQ A+S AD L
Sbjct: 333 ----------------GGNF--TINGASFTPPTVPVLLQILSGAQSA----AD-----LL 365
Query: 263 PFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFN 322
P + P N + A T+ HP HLHG+ V+ V + G+ +N
Sbjct: 366 PAGSVYSLPANADIEISLPA--TAAAPGFPHPFHLHGH-VFAVVRSAGS-------STYN 415
Query: 323 LIDPVERNTV--GVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPN 379
+PV R+ V G P G V IRF DNPG WF+HCH D HL G +V+ ++P+
Sbjct: 416 YANPVYRDVVSTGAP-GDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA---VVMAEDIPD 470
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 144/354 (40%), Gaps = 59/354 (16%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
++A NGL G + + + V+ GK Y RL++ + + FSI H LTV+E D
Sbjct: 166 ADATLINGL-GRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVD 224
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEY 143
I +P + + I Q + +L N N +++ A P F +G F +AIL Y
Sbjct: 225 GINSQPLLVDSIQIFAAQRYSFVLNANQTVGN--YWIRANPNFGTVG-FAGGINSAILRY 281
Query: 144 E-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPAN-VPQTVDKRFFFT 201
+ AP + + T P + + LA P + P VDK
Sbjct: 282 QGAPVAEPTTTQTTSVIPLI------------ETNLHPLARMPVPGSPTPGGVDKALNLA 329
Query: 202 VSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTAD--FPQF 259
+ NGT F +NN SF P+ +L G TA P
Sbjct: 330 FNF--------------NGTNFF--INNASFTPPTVPVLLQIL----SGAQTAQDLLPAG 369
Query: 260 PLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPK 319
++P P ++ + A T++ HP HLHG+ VV
Sbjct: 370 SVYPL------PAHSTIEITLPA--TALAPGAPHPFHLHGHAFAVVRSA--------GST 413
Query: 320 KFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAW 370
+N DP+ R+ V G P+ G V IRF DNPG WF+HCH D HL G + +
Sbjct: 414 TYNYNDPIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVF 467
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 154/380 (40%), Gaps = 61/380 (16%)
Query: 5 ADPEAIINQSLQTGNGPNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTAL 64
AD ++ + + G G +++ +GL N +A + V+ GK Y +RL++ +
Sbjct: 150 ADWYHVLAKEMGAG-GAITADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISC 208
Query: 65 NDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARP 124
+ FSI H +T++E D + + + + I Q + +L N N P ++++ A P
Sbjct: 209 DPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYSFVL--NANQPVGNYWIRANP 266
Query: 125 YFTGMGTFDNSTVAAILEYE-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLAN 183
G G FD +AIL Y+ A + D T+ L + L+
Sbjct: 267 NSGGEG-FDGGINSAILRYDGATTADPVTVASTVHTKCL-----------IETDLHPLSR 314
Query: 184 AQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPNGTKFAAA---VNNVSFALPSTALL 240
P N P +SLG FA +N VSF P+ +L
Sbjct: 315 NGVPGN-PHQGGADCNLNLSLG-----------------FACGNFVINGVSFTPPTVPVL 356
Query: 241 QSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGY 300
G TA L P + P+N+ + AL G HP HLHG+
Sbjct: 357 ----LQICSGANTA----ADLLPSGSVISLPSNSTIE---IALPAGAAGGP-HPFHLHGH 404
Query: 301 NVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPS-GGWVAIRFLADNPGVWFMHCHFD 359
+ + V + N N DP+ R+ V + G V IRF DNPG WF+HCH D
Sbjct: 405 D-FAVSESASN-------STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHID 456
Query: 360 VHLSWGLRMAWIVLDGELPN 379
HL G IV ++PN
Sbjct: 457 WHLDAGFA---IVFAEDIPN 473
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 139/348 (39%), Gaps = 80/348 (22%)
Query: 41 AKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPG 100
A + + V+ GK Y +RLI+ + + FSI H LT++E D +P + L I G
Sbjct: 181 AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTG 240
Query: 101 QTTNVLLKTNPNPPNASFFMLARPY--FTGM-GTFDNSTVAAILEYEA------------ 145
Q + +L + N P ++++ A+P G+ GTF N +AIL Y
Sbjct: 241 QRYSFVL--DANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANP 298
Query: 146 -PSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSL 204
P+Q N L P+ P I P V+ RF
Sbjct: 299 NPAQLNEADLHALIDPAAPGI---------------------PTPGAADVNLRFQL---- 333
Query: 205 GANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQFPLHP 263
G +G +F +N ++ PS LLQ A+S L P
Sbjct: 334 ------------GFSGGRFT--INGTAYESPSVPTLLQIMSGAQSAN---------DLLP 370
Query: 264 FNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNL 323
P N V + +LG HP HLHG+ VV +N
Sbjct: 371 AGSVYELPRNQVVE---LVVPAGVLGG-PHPFHLHGHAFSVVRSA--------GSSTYNF 418
Query: 324 IDPVERNTVGVP-SGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAW 370
++PV+R+ V + +G V IRF+ DNPG WF HCH + HL GL + +
Sbjct: 419 VNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 139/348 (39%), Gaps = 80/348 (22%)
Query: 41 AKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPG 100
A + + V+ GK Y +RLI+ + + FSI H LT++E D +P + L I G
Sbjct: 181 AAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDRLQIFTG 240
Query: 101 QTTNVLLKTNPNPPNASFFMLARPY--FTGM-GTFDNSTVAAILEYEA------------ 145
Q + +L + N P ++++ A+P G+ GTF N +AIL Y
Sbjct: 241 QRYSFVL--DANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANP 298
Query: 146 -PSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVSL 204
P+Q N L P+ P I P V+ RF
Sbjct: 299 NPAQLNEADLHALIDPAAPGI---------------------PTPGAADVNLRFQL---- 333
Query: 205 GANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQFPLHP 263
G +G +F +N ++ PS LLQ A+S L P
Sbjct: 334 ------------GFSGGRFT--INGTAYESPSVPTLLQIMSGAQSAN---------DLLP 370
Query: 264 FNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNL 323
P N V + +LG HP HLHG+ VV +N
Sbjct: 371 AGSVYELPRNQVVE---LVVPAGVLGG-PHPFHLHGHAFSVVRSA--------GSSTYNF 418
Query: 324 IDPVERNTVGVP-SGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAW 370
++PV+R+ V + +G V IRF+ DNPG WF HCH + HL GL + +
Sbjct: 419 VNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 148/358 (41%), Gaps = 54/358 (15%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
++A NGL G + + D + V GK Y RL++ + + FSI H+LTV+EAD
Sbjct: 165 ADATLINGL-GRSIDTLNADLAVITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEAD 223
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEY 143
++ +KP + + I Q + +L + + N +++ A P +G FD +AIL Y
Sbjct: 224 SVNLKPQTVDSIQIFAAQRYSFVLNADQDVGN--YWIRALPN-SGTRNFDGGVNSAILRY 280
Query: 144 EAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVS 203
+ + ++T P+ N A + + + + P V ++ F F
Sbjct: 281 DGAAPVEPTTSQT------PSTNPLVESALTTLEGTAAPGSPAPGGVDLALNMAFGFA-- 332
Query: 204 LGANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQFPLH 262
G KF +N SF P+ LLQ A+S L
Sbjct: 333 ----------------GGKFT--INGASFTPPTVPVLLQILSGAQSAQ---------DLL 365
Query: 263 PFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFN 322
P + P N + A T+ HP HLHG+ VV +N
Sbjct: 366 PSGSVYSLPANADIEISLPA--TAAAPGFPHPFHLHGHTFAVVRSA--------GSSTYN 415
Query: 323 LIDPVERNTVGVPS-GGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPN 379
+PV R+ V S G V IRF DNPG WF+HCH D HL G +V+ ++P
Sbjct: 416 YENPVYRDVVSTGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFA---VVMAEDIPE 470
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 158/377 (41%), Gaps = 60/377 (15%)
Query: 21 PNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV 80
P ++A NG G + S + +KV GK Y RL++ + N FSI H LT++
Sbjct: 163 PGGADATLING-KGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII 221
Query: 81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI 140
E D++ +P E + + I Q + +L N N +++ A P F +G FD +AI
Sbjct: 222 EVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDN--YWIRANPNFGNVG-FDGGINSAI 278
Query: 141 LEYE-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFF 199
L Y+ AP+ + + T KP +N+ + S+ + A V + ++ F
Sbjct: 279 LRYDGAPAVEPTTNQTTSVKP----LNEVDLHPLVSTP---VPGAPSSGGVDKAINMAFN 331
Query: 200 FTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQF 259
F NG+ F +N SF P+ +L G TA
Sbjct: 332 F------------------NGSNF--FINGASFVPPTVPVLLQIL----SGAQTAQ---- 363
Query: 260 PLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPK 319
L P P+N + T+ HP HLHG+ VV
Sbjct: 364 DLLPSGSVYVLPSNASIE--ISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV------- 414
Query: 320 KFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGE 376
+N +P+ R+ V G P+ G V IRF +NPG WF+HCH D HL G +V+ +
Sbjct: 415 -YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFA---VVMAED 470
Query: 377 LPNQK----LPPPPSDL 389
P+ K +P SDL
Sbjct: 471 TPDVKAVNPVPQAWSDL 487
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 158/377 (41%), Gaps = 60/377 (15%)
Query: 21 PNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV 80
P ++A NG G + S + +KV GK Y RL++ + N FSI H LT++
Sbjct: 163 PGGADATLING-KGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTII 221
Query: 81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI 140
E D++ +P E + + I Q + +L N N +++ A P F +G FD +AI
Sbjct: 222 EVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVDN--YWIRANPNFGNVG-FDGGINSAI 278
Query: 141 LEYE-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFF 199
L Y+ AP+ + + T KP +N+ + S+ + + V + ++ F
Sbjct: 279 LRYDGAPAVEPTTNQTTSVKP----LNEVDLHPLVSTP---VPGSPSSGGVDKAINMAFN 331
Query: 200 FTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQF 259
F NG+ F +N SF P+ +L G TA
Sbjct: 332 F------------------NGSNFF--INGASFVPPTVPVLLQIL----SGAQTAQ---- 363
Query: 260 PLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPK 319
L P P+N + T+ HP HLHG+ VV
Sbjct: 364 DLLPSGSVYVLPSNASIE--ISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV------- 414
Query: 320 KFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGE 376
+N +P+ R+ V G P+ G V IRF +NPG WF+HCH D HL G +V+ +
Sbjct: 415 -YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFA---VVMAED 470
Query: 377 LPNQK----LPPPPSDL 389
P+ K +P SDL
Sbjct: 471 TPDVKAVNPVPQAWSDL 487
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 293 HPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVW 352
HP+HLHG++ ++V Q F+ P KFNL++P R+ +P G++AI F DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 353 FMHCHFDVHLSWGLRMAWI 371
+HCH H S GL M ++
Sbjct: 523 LLHCHIAWHASEGLAMQFV 541
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 36 TYNCSAK---------DTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIY 86
T++CSA ++L G Y LRLIN ++ F+I NHTLTV+ D +
Sbjct: 235 TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294
Query: 87 VKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAP 146
+ P+ T+ L+I GQ +V+++ N N +++ T + + IL Y++
Sbjct: 295 IVPYTTDTLLIGIGQRYDVIVEANAAADN--YWIRGNWGTTCSTNNEAANATGILRYDSS 352
Query: 147 SQDN 150
S N
Sbjct: 353 SIAN 356
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 293 HPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGVW 352
HP+HLHG++ ++V Q F+ P KFNL++P R+ +P G++AI F DNPG W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 353 FMHCHFDVHLSWGLRMAWI 371
+HCH H S G+ M ++
Sbjct: 523 LLHCHIAWHASEGMAMQFV 541
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 36 TYNCSAK---------DTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIY 86
T++CSA ++L G Y LRLIN ++ F+I NHTLTV+ D +
Sbjct: 235 TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLVP 294
Query: 87 VKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEYEAP 146
+ P+ T+ L+I GQ +V+++ N N +++ T + + IL Y++
Sbjct: 295 IVPYTTDTLLIGIGQRYDVIVEANAAADN--YWIRGNWGTTCSTNNEAANATGILRYDSS 352
Query: 147 SQDN 150
S N
Sbjct: 353 SIAN 356
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 158/369 (42%), Gaps = 56/369 (15%)
Query: 21 PNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV 80
PN +++ NG + SA+ + + V GK RL++ + + FSI H T++
Sbjct: 163 PNGADSTLINGKGRAPSDSSAQLSV-VSVTKGKRXRFRLVSLSCDPNFTFSIDGHNNTII 221
Query: 81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI 140
E D++ +P T+ + I Q + L N N +++ A P F +G F+ +AI
Sbjct: 222 ETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVDN--YWIRANPNFGNVG-FNGGINSAI 278
Query: 141 LEYE-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFF 199
L Y+ AP+ + + T +P +N+TN S+ A V + ++ F
Sbjct: 279 LRYDGAPAVEPTTNQSTSTQP----LNETNLHPLVSTPVPGSPAA---GGVDKAINMAFN 331
Query: 200 FTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQF 259
F NG+ F +N SF PS +L G TA
Sbjct: 332 F------------------NGSNFF--INGASFTPPSVPVLLQIL----SGAQTAQ---- 363
Query: 260 PLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPK 319
L P T P+N + T+ HP HLHG+ V+ V + G+
Sbjct: 364 DLLPSGSVXTLPSNASIE--ISFPATAAAPGAPHPFHLHGH-VFAVVRSAGS-------T 413
Query: 320 KFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGE 376
+N +P+ R+ V G P+ G V IRFL +NPG WF+HCH D HL G +V +
Sbjct: 414 VYNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFA---VVQAED 470
Query: 377 LPNQKLPPP 385
+P+ K P
Sbjct: 471 VPDVKATNP 479
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 153/369 (41%), Gaps = 56/369 (15%)
Query: 21 PNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV 80
P ++A NG + SA+ + +KV GK RL++ + + FSI H LT++
Sbjct: 163 PAGADATLINGKGRAPSDTSAELSV-IKVTKGKRXRFRLVSLSCDPNFTFSIDGHNLTII 221
Query: 81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI 140
E D+ +P + + I Q + +L N N +++ A P F +G F+ +AI
Sbjct: 222 EVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVDN--YWIRANPNFGNVG-FNGGINSAI 278
Query: 141 LEYE-APSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFF 199
L Y+ AP+ + + T KP +N+ N S+ + + V + ++ F
Sbjct: 279 LRYDGAPAVEPTTNQTTSVKP----LNEVNLHPLVSTP---VPGSPSSGGVDKAINMAFN 331
Query: 200 FTVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQF 259
F NG+ F +N SF PS +L G TA
Sbjct: 332 F------------------NGSNFF--INGASFVPPSVPVLLQIL----SGAQTAQ---- 363
Query: 260 PLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPK 319
L P P+N + T+ HP HLHG+ VV
Sbjct: 364 DLLPSGSVXVLPSNASIE--ISFPATAAAPGAPHPFHLHGHTFAVVRSAGSTV------- 414
Query: 320 KFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGE 376
+N +P+ R+ V G P+ G V IRFL +NPG WF+HCH D HL G +V +
Sbjct: 415 -YNYSNPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFA---VVQAED 470
Query: 377 LPNQKLPPP 385
+P+ K P
Sbjct: 471 VPDVKATNP 479
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 137/336 (40%), Gaps = 70/336 (20%)
Query: 48 KVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVLL 107
+V+P TY+LR++N +F I +H +TVVE D I + T++L I Q VL+
Sbjct: 181 EVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLV 240
Query: 108 KTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI---LEYEAPSQDNSFRNRTLFKPSLPA 164
T N + +F ++ + FD++ + I L+ A S N+T +LP
Sbjct: 241 HT-KNDTDKNFAIMQK--------FDDTMLDVIPSDLQLNATSY--MVYNKT---AALPT 286
Query: 165 INDTNFVANFSSKF-----RSLANAQFPANVPQTVDKRFFFTVSLGANPCPKNQTCQGPN 219
N + + NF F A P +V TV + + N
Sbjct: 287 QNYVDSIDNFLDDFYLQPYEKEAIYGEPDHV---------ITVDVVMDNLK--------N 329
Query: 220 GTKFAAAVNNVSFALPST----ALLQSYFFAKSKGVYTADFPQFPLHPFNYTGTPPNNTF 275
G +A NN+++ P +L S A + +Y ++ F L NN
Sbjct: 330 GVNYAF-FNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQ- 387
Query: 276 VSNGTKALDTSILGAESHPLHLHGYNVYVV----------GQGFGNFDPKNDPKKFNLID 325
DT +HP HLHG+ + G+ +FDP N P
Sbjct: 388 --------DTG-----THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEY-- 432
Query: 326 PVERNTVGVPSGGWVAIRFLADNPGVWFMHCHFDVH 361
P+ R+T+ V IRF ADNPGVWF HCH + H
Sbjct: 433 PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 144/352 (40%), Gaps = 52/352 (14%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
+++ NGL G +A D + V+ K Y RL++ + + FSI H +T++E D
Sbjct: 166 ADSVLINGL-GRFAGGNASDLAVITVEQNKRYRFRLVSLSCDPNFTFSIDGHNMTIIEVD 224
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTV--AAIL 141
+ +P E + + I Q + +L + N +++ A P GT D + +AIL
Sbjct: 225 GVNHEPLEVDSIQIFASQRYSFVLNATQSVDN--YWIRAIP---NTGTIDTTGGLNSAIL 279
Query: 142 EYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPAN-VPQTVDKRFFF 200
Y + N T T+ + + L + P + V VD
Sbjct: 280 RYSGADIVDPTANAT-----------TSVIPLVETDLVPLDSPAAPGDPVVGGVDLAMNL 328
Query: 201 TVSLGANPCPKNQTCQGPNGTKFAAAVNNVSFALPST-ALLQSYFFAKSKGVYTADFPQF 259
S NGT F +NN + P+ LLQ A+S +
Sbjct: 329 DFSF--------------NGTNFF--INNETLIPPTVPVLLQILSGAQSASDLLPTGSVY 372
Query: 260 PLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPK 319
L P N T NG T+ GA HP HLHG+ VV + G+ D
Sbjct: 373 TL-PLNSTIELSFPITTVNGV----TNAPGAP-HPFHLHGHAFSVV-RSAGSSD------ 419
Query: 320 KFNLIDPVERNTVGVPS-GGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAW 370
+N ++PV R+TV + G V IRF DN G WF+HCH D HL G + +
Sbjct: 420 -YNYVNPVRRDTVSTGNPGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVF 470
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 140/350 (40%), Gaps = 51/350 (14%)
Query: 24 SEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEAD 83
++A NG G + + + D + V PGK Y RL++ + + FSI H +T++E D
Sbjct: 166 ADATLING-KGRSPSTTTADLSVISVTPGKRYRFRLVSLSCDPNYTFSIDGHNMTIIETD 224
Query: 84 AIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAILEY 143
+I P + + I Q + +L+ N N +++ A P F +G F +AIL Y
Sbjct: 225 SINTAPLVVDSIQIFAAQRYSFVLEANQAVDN--YWIRANPNFGNVG-FTGGINSAILRY 281
Query: 144 EAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFFTVS 203
+ + +T L +N VA ++ + V ++ F F
Sbjct: 282 DGAAAVEPTTTQTTSTAPLNEVNLHPLVAT------AVPGSPVAGGVDLAINMAFNF--- 332
Query: 204 LGANPCPKNQTCQGPNGTKFAAAVNNVSFALPSTALLQSYFFAKSKGVYTADFPQFPLHP 263
NGT F +N SF P+ +L G A L P
Sbjct: 333 ---------------NGTNFF--INGASFTPPTVPVLLQII----SGAQNAQ----DLLP 367
Query: 264 FNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNL 323
+ P+N + T+ HP HLHG+ VV +N
Sbjct: 368 SGSVYSLPSNADIE--ISFPATAAAPGAPHPFHLHGHAFAVVRSA--------GSTVYNY 417
Query: 324 IDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMAW 370
+P+ R+ V G P+ G V IRF DNPG WF+HCH D HL G + +
Sbjct: 418 DNPIFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 293 HPLHLHGYNVYVVGQGFGN---------FDPKNDPKKFNLIDPVERNTVGVPSGGWVAIR 343
HP+HLHG++ V+G+ FDP D + +PV R+ +P+GGW+ +
Sbjct: 472 HPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWLLLA 531
Query: 344 FLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGELPNQ 380
F DNPG W HCH H+S GL + ++ +L Q
Sbjct: 532 FKTDNPGAWLFHCHIAWHVSGGLSVDFLERPNDLRTQ 568
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 41 AKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPG 100
A Y + + PGK + LR+INT+ ++ S+ H +TV+ D + V F + L +A G
Sbjct: 252 AGQWYNVTLTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVG 311
Query: 101 QTTNVLLKTNPNPPNASFFMLARPYFTGM-GTFDNSTVAAILEYEA 145
Q +V + N +P +F + + G+ G+ +N AAI Y+
Sbjct: 312 QRYDVTIDAN-SPVGNYWFNVT--FGDGLCGSSNNKFPAAIFRYQG 354
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 293 HPLHLHGYNVYVVG---------QGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIR 343
HP+HLHG++ V+G Q FDP D + N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 344 FLADNPGVWFMHCHFDVHLSWGLRM 368
F DNPG W HCH H+S GL +
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSV 515
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 47 LKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVL 106
+ + PGK + LR++NT+ + S+ NHT+TV+ AD + V + L +A GQ +V+
Sbjct: 217 VTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVV 276
Query: 107 LKTNPNPPNASF 118
+ + P N F
Sbjct: 277 IDASRAPDNYWF 288
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 293 HPLHLHGYNVYVVG---------QGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIR 343
HP+HLHG++ V+G Q FDP D + N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 344 FLADNPGVWFMHCHFDVHLSWGLRM 368
F DNPG W HCH H+S GL +
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSV 515
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 47 LKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVL 106
+ + PGK + LR++NT+ + S+ NHT+TV+ AD + V + L +A GQ +V+
Sbjct: 217 VTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVV 276
Query: 107 LKTNPNPPNASF 118
+ + P N F
Sbjct: 277 IDASRAPDNYWF 288
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 293 HPLHLHGYNVYVVG---------QGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIR 343
HP+HLHG++ V+G Q FDP D + N +P R+T +P+GGW+ +
Sbjct: 431 HPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLA 490
Query: 344 FLADNPGVWFMHCHFDVHLSWGLRM 368
F DNPG W HCH H+S GL +
Sbjct: 491 FRTDNPGAWLFHCHIAWHVSGGLSV 515
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 47 LKVKPGKTYMLRLINTALNDELFFSIANHTLTVVEADAIYVKPFETNILVIAPGQTTNVL 106
+ + PGK + LR++NT+ + S+ NHT+TV+ AD + V + L +A GQ +V+
Sbjct: 217 VTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVV 276
Query: 107 LKTNPNPPNASF 118
+ + P N F
Sbjct: 277 IDASRAPDNYWF 288
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 150/370 (40%), Gaps = 70/370 (18%)
Query: 21 PNVSEAYTFNGLPGPTYNCSAKDTYKLKVKPGKTYMLRLINTALNDELFFSIANHTLTVV 80
P ++A NG G + + D + V GK Y RL++ + + FSI H +T++
Sbjct: 163 PGGADATLING-QGRGPSSPSADLAVISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTII 221
Query: 81 EADAIYVKPFETNILVIAPGQTTNVLLKTNPNPPNASFFMLARPYFTGMGTFDNSTVAAI 140
+ D+I V+P + I Q + +L N N +++ A P +G F N +AI
Sbjct: 222 QVDSINVQPLVVLKIQIYAAQRYSFILNANQAVNN--YWIRANPNQGNVG-FTNGINSAI 278
Query: 141 LEYEAPSQDNSFRNRTLFKPSLPAINDTNFVANFSSKFRSLANAQFPANVPQTVDKRFFF 200
L Y + ++T S+ ++ TN ++ + V +++ F F
Sbjct: 279 LRYSGAAATQPTTSQT---SSVQPLDQTNL---HPLTATAVPGSPVAGGVNLAINQAFNF 332
Query: 201 TVS----LGANPCPKN--QTCQGPNGTKFAAAV--NNVSFALPSTALLQSYFFAKSKGVY 252
+ GA+ P Q +G + AA + + + ++LPS A ++ F A S
Sbjct: 333 NGTNHFVDGASFVPPTVPVLSQIVSGAQSAADLLASGLVYSLPSDANIEISFPATSAA-- 390
Query: 253 TADFPQFPLHPFNYTGTPPNNTFVSNGTKALDTSILGAESHPLHLHGYNVYVVGQGFGNF 312
A P HPF HLHG+ VV
Sbjct: 391 -AGGP----HPF-------------------------------HLHGHAFAVVRSA---- 410
Query: 313 DPKNDPKKFNLIDPVERNTV--GVPSGGW-VAIRFLADNPGVWFMHCHFDVHLSWGLRMA 369
+N DP+ R+TV G P+ V IRF +NPG WF+HCH D HL G
Sbjct: 411 ----GSTTYNYNDPIFRDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFA-- 464
Query: 370 WIVLDGELPN 379
+V ++P+
Sbjct: 465 -VVFAQDIPD 473
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 54 TYMLRLINTALNDELFFSIANHTLTVVEADAIYVK-PFETNILVIAPGQTTNVLLKTNPN 112
T LRL+N + ++ +H L ++ AD +++ P E + L++APG+ VL++
Sbjct: 196 TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLVRLR-- 253
Query: 113 PPNASFFMLARPY 125
F + A PY
Sbjct: 254 -KEGRFLLQALPY 265
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 337 GGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGE 376
G + + PG+W +HCH H+ G+ + VL E
Sbjct: 1002 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1041
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 337 GGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIVLDGE 376
G + + PG+W +HCH H+ G+ + VL E
Sbjct: 1021 GTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 11/75 (14%)
Query: 289 GAESHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADN 348
G H +H HG+ + + F L P++ +TV + G + DN
Sbjct: 196 GDHVHAIHTHGHISQIAFK-----------DGFPLDKPIKGDTVLIGPGERYDVILNMDN 244
Query: 349 PGVWFMHCHFDVHLS 363
PG+W +H H D H +
Sbjct: 245 PGLWMIHDHVDTHTT 259
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 292 SHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPVERNTVGVPSGGWVAIRFLADNPGV 351
HP H+HG ++ + K +F + R+T+ V + +R D G+
Sbjct: 406 DHPFHIHGTQFELIS---SKLNGKVQKAEFRAL----RDTINVRPNEELRLRMKQDFKGL 458
Query: 352 WFMHCHFDVHLSWGL 366
HCH H G+
Sbjct: 459 RMYHCHILEHEDLGM 473
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 292 SHPLHLHGYNVYVVGQGFGNFDPKNDPKKFNLIDPV---ERNTVGVPSGGWVAIRFLADN 348
+HP+H+H + V+ + GN P + L D V R TV V + A
Sbjct: 397 THPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRETVVVEA-------HYAPF 449
Query: 349 PGVWFMHCHFDVH 361
PGV+ HCH +H
Sbjct: 450 PGVYMFHCHNLIH 462
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 274 TFVSNGTKALDTSILGAES--HPLHLHGYNVY--VVGQGFGNFDPKNDPKKFNLIDPVER 329
TF +N + ++ +G S H HLHG+ G +DP LID +
Sbjct: 191 TFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNRTGMRTSEYDPSP------LIDIKDL 244
Query: 330 NTVGVPSGGWVAIRFLADNPGVWFMHCHFDVHLSWGLRMAWIV--LDGELP 378
N GV S G+ I PG+W HCH H G+ ++V DG +P
Sbjct: 245 NP-GV-SFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADGTMP 293
>pdb|3L6W|A Chain A, Structure Of The Collar Functional Unit (Klh1-H) Of
Keyhole Limpet Hemocyanin
pdb|3L6W|B Chain B, Structure Of The Collar Functional Unit (Klh1-H) Of
Keyhole Limpet Hemocyanin
pdb|3QJO|A Chain A, Refined Structure Of The Functional Unit (Klh1-H) Of
Keyhole Limpet Hemocyanin
pdb|3QJO|B Chain B, Refined Structure Of The Functional Unit (Klh1-H) Of
Keyhole Limpet Hemocyanin
Length = 491
Score = 28.1 bits (61), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 250 GVYTADFPQFPLHPFNYTGTPPNNTFVSNGT---KALDTSILGAESHPLHLHGYNV 302
G D PLHPFNY N+ F + +D+ + L+LHG+N+
Sbjct: 225 GSCAGDIMHVPLHPFNYESV-NNDDFTRENSLPNAVVDSHRFNYKYDNLNLHGHNI 279
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,432,709
Number of Sequences: 62578
Number of extensions: 603617
Number of successful extensions: 1218
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 84
length of query: 392
length of database: 14,973,337
effective HSP length: 101
effective length of query: 291
effective length of database: 8,652,959
effective search space: 2518011069
effective search space used: 2518011069
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)