Query 038599
Match_columns 473
No_of_seqs 287 out of 2830
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 12:39:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038599.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038599hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2217 ZntA Cation transport 100.0 3.2E-79 6.9E-84 658.0 40.1 382 2-407 323-710 (713)
2 KOG0207 Cation transport ATPas 100.0 1.9E-75 4.1E-80 618.3 30.4 433 2-449 490-950 (951)
3 PRK11033 zntA zinc/cadmium/mer 100.0 1.7E-66 3.8E-71 572.3 42.5 385 2-408 354-740 (741)
4 TIGR01647 ATPase-IIIA_H plasma 100.0 5.5E-62 1.2E-66 538.2 36.9 385 2-403 204-650 (755)
5 PRK10671 copA copper exporting 100.0 2.9E-61 6.3E-66 539.8 40.3 385 2-408 434-831 (834)
6 TIGR01525 ATPase-IB_hvy heavy 100.0 5.8E-61 1.3E-65 515.7 41.0 380 2-404 167-556 (556)
7 TIGR01512 ATPase-IB2_Cd heavy 100.0 3.3E-61 7.1E-66 514.9 38.3 369 2-406 166-536 (536)
8 PRK14010 potassium-transportin 100.0 3E-60 6.5E-65 510.6 41.4 317 35-371 251-578 (673)
9 PRK15122 magnesium-transportin 100.0 5.8E-61 1.3E-65 537.3 37.3 349 34-400 321-751 (903)
10 TIGR01524 ATPase-IIIB_Mg magne 100.0 3.6E-60 7.7E-65 530.1 38.6 381 2-400 255-716 (867)
11 PRK10517 magnesium-transportin 100.0 3.2E-60 6.9E-65 530.7 37.3 380 3-400 291-751 (902)
12 PRK01122 potassium-transportin 100.0 2.6E-58 5.6E-63 496.1 43.4 294 70-367 271-578 (679)
13 TIGR01511 ATPase-IB1_Cu copper 100.0 6.6E-58 1.4E-62 491.3 39.5 345 2-380 203-550 (562)
14 TIGR01517 ATPase-IIB_Ca plasma 100.0 2.1E-58 4.6E-63 521.2 36.1 395 2-411 279-797 (941)
15 COG0474 MgtA Cation transport 100.0 1.2E-58 2.7E-63 519.3 27.6 383 3-400 267-755 (917)
16 TIGR01497 kdpB K+-transporting 100.0 4E-56 8.7E-61 478.1 41.8 297 70-370 272-582 (675)
17 KOG0202 Ca2+ transporting ATPa 100.0 5.7E-57 1.2E-61 472.6 28.1 353 34-401 284-794 (972)
18 TIGR01522 ATPase-IIA2_Ca golgi 100.0 6E-56 1.3E-60 498.4 37.5 351 34-399 276-732 (884)
19 TIGR01523 ATPase-IID_K-Na pota 100.0 1.1E-54 2.3E-59 492.1 38.7 352 34-400 311-866 (1053)
20 KOG0204 Calcium transporting A 100.0 3.3E-56 7.1E-61 466.3 21.6 346 39-399 392-853 (1034)
21 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.1E-53 2.4E-58 484.4 37.5 382 3-399 264-798 (997)
22 TIGR01494 ATPase_P-type ATPase 100.0 4.9E-53 1.1E-57 449.6 35.1 341 6-395 150-497 (499)
23 TIGR01657 P-ATPase-V P-type AT 100.0 3.8E-53 8.2E-58 482.8 36.3 349 34-400 400-912 (1054)
24 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-52 1.7E-56 466.2 38.1 348 36-400 243-745 (917)
25 KOG0208 Cation transport ATPas 100.0 3.7E-45 8.1E-50 388.2 27.1 321 40-378 426-932 (1140)
26 KOG0203 Na+/K+ ATPase, alpha s 100.0 1.4E-46 3.1E-51 393.7 13.1 392 2-409 285-833 (1019)
27 COG2216 KdpB High-affinity K+ 100.0 1.8E-44 3.9E-49 361.0 25.5 282 72-357 274-570 (681)
28 TIGR01652 ATPase-Plipid phosph 100.0 3.6E-42 7.8E-47 393.6 31.7 342 36-397 303-883 (1057)
29 KOG0205 Plasma membrane H+-tra 100.0 2.1E-40 4.5E-45 338.5 17.5 344 40-400 285-687 (942)
30 KOG0209 P-type ATPase [Inorgan 100.0 2.2E-37 4.7E-42 323.0 21.9 343 7-364 394-945 (1160)
31 PLN03190 aminophospholipid tra 100.0 3.4E-35 7.3E-40 334.7 35.9 289 83-376 439-951 (1178)
32 PF00702 Hydrolase: haloacid d 100.0 1.3E-32 2.8E-37 259.7 10.4 207 97-315 1-215 (215)
33 KOG0210 P-type ATPase [Inorgan 100.0 3.4E-27 7.5E-32 243.1 21.4 282 81-365 391-850 (1051)
34 KOG0206 P-type ATPase [General 99.9 1.1E-23 2.5E-28 234.3 16.3 294 80-375 370-873 (1151)
35 COG4087 Soluble P-type ATPase 99.7 9.3E-17 2E-21 135.0 10.1 125 221-348 19-146 (152)
36 TIGR02137 HSK-PSP phosphoserin 99.2 5.2E-11 1.1E-15 112.1 10.3 115 232-351 68-198 (203)
37 PRK11133 serB phosphoserine ph 99.1 4.9E-10 1.1E-14 112.5 10.5 115 232-350 181-317 (322)
38 TIGR00338 serB phosphoserine p 99.0 1E-09 2.3E-14 104.2 9.3 112 232-347 85-218 (219)
39 TIGR01670 YrbI-phosphatas 3-de 99.0 4.7E-09 1E-13 94.5 12.2 96 240-340 36-136 (154)
40 PRK01158 phosphoglycolate phos 98.9 6E-09 1.3E-13 99.6 11.6 132 213-349 4-226 (230)
41 PRK10513 sugar phosphate phosp 98.9 6.4E-09 1.4E-13 102.0 12.0 133 213-349 4-265 (270)
42 COG0561 Cof Predicted hydrolas 98.9 5.9E-09 1.3E-13 102.1 11.6 133 213-350 4-259 (264)
43 TIGR01487 SPP-like sucrose-pho 98.9 4.7E-09 1E-13 99.6 10.2 130 214-347 3-214 (215)
44 PRK09484 3-deoxy-D-manno-octul 98.9 5E-09 1.1E-13 97.0 9.3 139 210-353 19-173 (183)
45 TIGR02726 phenyl_P_delta pheny 98.9 1.2E-08 2.6E-13 93.0 10.5 101 239-342 41-144 (169)
46 PRK15126 thiamin pyrimidine py 98.9 1.1E-08 2.5E-13 100.5 10.8 133 213-349 3-259 (272)
47 PRK10976 putative hydrolase; P 98.9 1.6E-08 3.5E-13 99.0 11.6 133 213-349 3-261 (266)
48 COG0560 SerB Phosphoserine pho 98.8 8E-09 1.7E-13 97.8 8.4 104 231-336 76-199 (212)
49 PRK13582 thrH phosphoserine ph 98.8 2.1E-08 4.7E-13 94.1 10.6 112 232-349 68-196 (205)
50 PRK10530 pyridoxal phosphate ( 98.8 5.6E-08 1.2E-12 95.3 13.5 133 213-349 4-268 (272)
51 TIGR01482 SPP-subfamily Sucros 98.8 2.6E-08 5.6E-13 94.9 10.5 127 219-349 5-222 (225)
52 COG1778 Low specificity phosph 98.8 3E-08 6.4E-13 86.9 8.9 114 239-357 42-164 (170)
53 KOG1615 Phosphoserine phosphat 98.8 1.3E-08 2.8E-13 92.1 6.1 91 231-321 87-199 (227)
54 PF08282 Hydrolase_3: haloacid 98.7 7.2E-08 1.6E-12 92.4 10.3 125 219-347 5-253 (254)
55 PLN02887 hydrolase family prot 98.7 1.3E-07 2.8E-12 101.8 12.3 52 297-349 525-576 (580)
56 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.7 1.2E-07 2.6E-12 88.4 10.1 98 232-332 80-199 (201)
57 TIGR00099 Cof-subfamily Cof su 98.6 2E-07 4.3E-12 90.8 10.0 128 216-347 3-255 (256)
58 PLN02954 phosphoserine phospha 98.6 3.4E-07 7.4E-12 87.2 10.9 114 232-347 84-222 (224)
59 COG0546 Gph Predicted phosphat 98.5 1.2E-06 2.6E-11 83.6 12.0 118 230-349 87-218 (220)
60 PF12710 HAD: haloacid dehalog 98.5 3.8E-07 8.1E-12 84.3 7.5 78 235-312 92-192 (192)
61 TIGR03333 salvage_mtnX 2-hydro 98.5 9.2E-07 2E-11 83.9 10.0 90 231-321 69-182 (214)
62 TIGR01488 HAD-SF-IB Haloacid D 98.4 9.1E-07 2E-11 80.8 8.2 80 233-314 74-177 (177)
63 PRK03669 mannosyl-3-phosphogly 98.4 4.2E-06 9E-11 82.4 13.1 59 211-272 6-64 (271)
64 PRK09552 mtnX 2-hydroxy-3-keto 98.4 1.2E-06 2.6E-11 83.3 9.0 88 232-320 74-185 (219)
65 PRK13222 phosphoglycolate phos 98.4 3.2E-06 6.9E-11 80.4 11.8 119 231-351 92-224 (226)
66 PRK00192 mannosyl-3-phosphogly 98.3 6.2E-06 1.3E-10 81.2 13.2 57 213-272 5-61 (273)
67 TIGR01489 DKMTPPase-SF 2,3-dik 98.3 1.5E-06 3.2E-11 80.1 8.1 89 231-319 71-186 (188)
68 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 2.4E-06 5.2E-11 79.9 8.1 90 230-321 85-197 (202)
69 TIGR01454 AHBA_synth_RP 3-amin 98.3 7.8E-06 1.7E-10 76.8 11.3 116 231-348 74-203 (205)
70 TIGR01486 HAD-SF-IIB-MPGP mann 98.2 1E-05 2.2E-10 78.8 12.1 52 297-349 196-253 (256)
71 PRK08238 hypothetical protein; 98.2 5.1E-05 1.1E-09 80.4 16.7 89 232-321 72-165 (479)
72 PRK13288 pyrophosphatase PpaX; 98.2 1.2E-05 2.6E-10 76.1 10.5 115 232-348 82-210 (214)
73 cd01427 HAD_like Haloacid deha 98.1 2.1E-05 4.5E-10 67.4 9.7 87 229-315 21-133 (139)
74 TIGR01449 PGP_bact 2-phosphogl 98.1 2.1E-05 4.5E-10 74.1 10.3 113 232-346 85-211 (213)
75 PRK06769 hypothetical protein; 98.1 2.8E-05 6.1E-10 71.3 10.7 106 210-317 2-132 (173)
76 TIGR02471 sucr_syn_bact_C sucr 98.1 1.2E-05 2.5E-10 77.4 8.4 65 284-349 159-232 (236)
77 PRK13223 phosphoglycolate phos 98.0 4E-05 8.7E-10 75.5 11.4 117 231-349 100-230 (272)
78 PRK13225 phosphoglycolate phos 98.0 8E-05 1.7E-09 73.4 12.0 113 232-348 142-267 (273)
79 PRK10826 2-deoxyglucose-6-phos 97.9 4.5E-05 9.8E-10 72.5 9.6 110 231-345 91-216 (222)
80 PRK13226 phosphoglycolate phos 97.9 0.00011 2.3E-09 70.5 11.2 116 232-349 95-225 (229)
81 PRK10187 trehalose-6-phosphate 97.9 7.4E-05 1.6E-09 73.4 9.6 131 212-349 14-241 (266)
82 TIGR01485 SPP_plant-cyano sucr 97.8 7E-05 1.5E-09 72.7 8.9 131 217-348 6-243 (249)
83 PLN02770 haloacid dehalogenase 97.8 0.00021 4.5E-09 69.4 10.8 110 232-343 108-230 (248)
84 PRK08942 D,D-heptose 1,7-bisph 97.7 0.00028 6.2E-09 64.9 11.0 114 233-349 30-177 (181)
85 TIGR01422 phosphonatase phosph 97.7 0.00017 3.6E-09 70.1 9.6 85 232-316 99-195 (253)
86 TIGR03351 PhnX-like phosphonat 97.7 0.00025 5.5E-09 67.1 10.6 114 231-347 86-218 (220)
87 TIGR01672 AphA HAD superfamily 97.6 0.00013 2.8E-09 70.3 7.3 84 233-316 115-205 (237)
88 PRK11009 aphA acid phosphatase 97.6 0.00013 2.7E-09 70.3 7.0 87 231-320 113-210 (237)
89 PRK06698 bifunctional 5'-methy 97.6 0.00041 8.8E-09 73.6 11.4 119 232-352 330-457 (459)
90 TIGR01662 HAD-SF-IIIA HAD-supe 97.6 0.00053 1.1E-08 59.5 10.3 103 214-316 2-125 (132)
91 PLN03243 haloacid dehalogenase 97.6 0.0006 1.3E-08 66.7 11.7 113 232-346 109-232 (260)
92 PRK12702 mannosyl-3-phosphogly 97.6 0.0005 1.1E-08 67.6 10.6 57 213-272 2-58 (302)
93 TIGR02461 osmo_MPG_phos mannos 97.6 0.00066 1.4E-08 65.0 11.1 53 216-272 3-55 (225)
94 PRK13478 phosphonoacetaldehyde 97.6 0.00063 1.4E-08 66.7 11.1 116 232-349 101-255 (267)
95 PRK11587 putative phosphatase; 97.5 0.00079 1.7E-08 63.9 10.9 110 232-344 83-203 (218)
96 TIGR01548 HAD-SF-IA-hyp1 haloa 97.5 0.00051 1.1E-08 64.0 9.0 85 230-314 104-197 (197)
97 TIGR01544 HAD-SF-IE haloacid d 97.5 0.00053 1.1E-08 67.3 9.2 118 231-348 120-273 (277)
98 TIGR01668 YqeG_hyp_ppase HAD s 97.5 0.00097 2.1E-08 60.9 10.4 106 206-316 19-130 (170)
99 KOG4383 Uncharacterized conser 97.5 0.0017 3.8E-08 69.0 13.1 161 221-381 815-1113(1354)
100 COG4030 Uncharacterized protei 97.5 0.00084 1.8E-08 62.7 9.6 116 232-350 83-263 (315)
101 TIGR02253 CTE7 HAD superfamily 97.4 0.0012 2.6E-08 62.5 10.8 90 232-321 94-195 (221)
102 PLN02382 probable sucrose-phos 97.4 0.00082 1.8E-08 70.1 10.4 65 284-349 175-257 (413)
103 TIGR00213 GmhB_yaeD D,D-heptos 97.4 0.0015 3.2E-08 59.9 10.6 129 214-345 3-175 (176)
104 PLN02575 haloacid dehalogenase 97.4 0.0017 3.7E-08 66.7 11.9 111 232-345 216-338 (381)
105 PRK11590 hypothetical protein; 97.4 0.0013 2.9E-08 62.1 10.2 89 232-321 95-202 (211)
106 COG2179 Predicted hydrolase of 97.3 0.0013 2.9E-08 58.7 9.2 108 204-316 20-132 (175)
107 TIGR01545 YfhB_g-proteo haloac 97.3 0.0018 4E-08 61.2 10.5 90 232-321 94-201 (210)
108 PRK14502 bifunctional mannosyl 97.3 0.0015 3.2E-08 71.1 10.6 57 213-272 417-473 (694)
109 TIGR02463 MPGP_rel mannosyl-3- 97.3 0.0013 2.8E-08 62.4 9.0 52 217-272 4-56 (221)
110 PRK14988 GMP/IMP nucleotidase; 97.3 0.0017 3.8E-08 62.0 9.9 87 231-317 92-188 (224)
111 PHA02530 pseT polynucleotide k 97.2 0.001 2.2E-08 66.3 8.2 90 229-318 184-292 (300)
112 TIGR01428 HAD_type_II 2-haloal 97.2 0.0018 3.8E-08 60.3 9.3 86 232-317 92-187 (198)
113 PLN02779 haloacid dehalogenase 97.2 0.0021 4.5E-08 63.9 10.2 112 232-345 144-269 (286)
114 TIGR02254 YjjG/YfnB HAD superf 97.2 0.0021 4.6E-08 60.7 9.9 113 232-347 97-223 (224)
115 PRK14501 putative bifunctional 97.2 0.0023 4.9E-08 71.8 11.4 141 202-349 482-721 (726)
116 PRK09449 dUMP phosphatase; Pro 97.2 0.0037 8.1E-08 59.3 11.2 114 232-348 95-222 (224)
117 TIGR01484 HAD-SF-IIB HAD-super 97.2 0.0017 3.6E-08 60.8 8.7 51 216-270 3-55 (204)
118 TIGR01685 MDP-1 magnesium-depe 97.1 0.0027 5.9E-08 58.2 8.9 91 230-320 43-155 (174)
119 TIGR01656 Histidinol-ppas hist 97.0 0.0033 7.3E-08 55.8 8.7 86 232-317 27-140 (147)
120 PF13419 HAD_2: Haloacid dehal 97.0 0.0024 5.3E-08 57.1 7.7 88 230-317 75-172 (176)
121 TIGR01990 bPGM beta-phosphoglu 97.0 0.0025 5.4E-08 58.4 7.6 84 232-317 87-180 (185)
122 PLN02940 riboflavin kinase 97.0 0.0031 6.6E-08 65.3 9.0 86 232-317 93-189 (382)
123 COG4359 Uncharacterized conser 96.9 0.0023 5E-08 58.0 6.6 89 232-320 73-184 (220)
124 PF00122 E1-E2_ATPase: E1-E2 A 96.9 0.0015 3.2E-08 62.4 5.6 76 3-93 152-230 (230)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.0035 7.6E-08 57.3 7.6 85 231-317 87-181 (185)
126 COG3769 Predicted hydrolase (H 96.9 0.0087 1.9E-07 55.9 9.8 57 213-273 8-64 (274)
127 TIGR01664 DNA-3'-Pase DNA 3'-p 96.8 0.011 2.3E-07 53.9 10.1 105 213-317 14-157 (166)
128 TIGR01509 HAD-SF-IA-v3 haloaci 96.8 0.0081 1.8E-07 54.6 9.4 84 232-316 85-178 (183)
129 TIGR01261 hisB_Nterm histidino 96.7 0.0069 1.5E-07 54.8 8.2 86 233-318 30-143 (161)
130 smart00775 LNS2 LNS2 domain. T 96.7 0.016 3.4E-07 52.3 10.0 88 230-317 25-141 (157)
131 PTZ00174 phosphomannomutase; P 96.6 0.0073 1.6E-07 58.5 8.0 53 212-267 5-57 (247)
132 PLN02811 hydrolase 96.6 0.0067 1.4E-07 57.6 7.3 87 231-317 77-179 (220)
133 TIGR00685 T6PP trehalose-phosp 96.5 0.0086 1.9E-07 57.9 7.9 62 282-348 165-239 (244)
134 PRK05446 imidazole glycerol-ph 96.5 0.012 2.6E-07 59.9 9.2 87 231-317 29-143 (354)
135 smart00577 CPDc catalytic doma 96.5 0.003 6.4E-08 56.3 4.1 89 230-319 43-139 (148)
136 PLN02580 trehalose-phosphatase 96.5 0.028 6E-07 57.8 11.5 62 204-266 111-174 (384)
137 TIGR02252 DREG-2 REG-2-like, H 96.4 0.012 2.6E-07 54.8 8.2 84 232-316 105-199 (203)
138 TIGR01686 FkbH FkbH-like domai 96.4 0.012 2.5E-07 59.5 8.1 105 214-320 5-128 (320)
139 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.3 0.028 6.1E-07 54.2 10.4 99 212-315 8-115 (242)
140 TIGR01549 HAD-SF-IA-v1 haloaci 96.3 0.017 3.7E-07 51.2 8.1 83 232-315 64-154 (154)
141 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.3 0.052 1.1E-06 53.0 12.2 55 215-273 4-65 (257)
142 PF09419 PGP_phosphatase: Mito 96.3 0.02 4.3E-07 52.1 8.2 105 207-315 36-157 (168)
143 TIGR01691 enolase-ppase 2,3-di 96.2 0.023 4.9E-07 54.2 8.6 90 229-318 92-192 (220)
144 TIGR01533 lipo_e_P4 5'-nucleot 96.2 0.022 4.9E-07 55.7 8.7 81 230-310 116-203 (266)
145 TIGR01675 plant-AP plant acid 96.2 0.022 4.7E-07 54.4 8.2 79 230-308 118-209 (229)
146 TIGR01681 HAD-SF-IIIC HAD-supe 96.1 0.027 5.8E-07 48.8 7.8 82 232-313 29-126 (128)
147 PLN02919 haloacid dehalogenase 96.0 0.033 7.2E-07 64.9 10.2 110 232-344 161-285 (1057)
148 PRK10444 UMP phosphatase; Prov 95.9 0.047 1E-06 53.0 9.5 47 226-272 11-60 (248)
149 PLN02205 alpha,alpha-trehalose 95.8 0.06 1.3E-06 61.2 11.0 67 202-268 586-653 (854)
150 PF05116 S6PP: Sucrose-6F-phos 95.5 0.025 5.4E-07 54.9 5.7 45 282-327 163-212 (247)
151 PF13344 Hydrolase_6: Haloacid 95.4 0.027 5.9E-07 46.7 5.1 83 228-316 10-100 (101)
152 PLN03017 trehalose-phosphatase 95.4 0.18 3.9E-06 51.5 11.9 58 208-266 107-166 (366)
153 PF06888 Put_Phosphatase: Puta 95.4 0.054 1.2E-06 52.0 7.5 80 232-311 71-186 (234)
154 TIGR02247 HAD-1A3-hyp Epoxide 95.4 0.032 7E-07 52.3 6.0 87 231-317 93-191 (211)
155 PLN02645 phosphoglycolate phos 95.2 0.068 1.5E-06 53.7 7.9 109 204-319 21-135 (311)
156 PHA02597 30.2 hypothetical pro 94.8 0.079 1.7E-06 49.1 6.9 84 232-317 74-169 (197)
157 PRK09456 ?-D-glucose-1-phospha 94.8 0.095 2E-06 48.8 7.5 87 232-318 84-181 (199)
158 TIGR01457 HAD-SF-IIA-hyp2 HAD- 94.8 0.2 4.3E-06 48.6 9.9 56 214-273 3-61 (249)
159 PRK10725 fructose-1-P/6-phosph 94.7 0.13 2.9E-06 47.0 7.9 82 234-317 90-181 (188)
160 PRK10563 6-phosphogluconate ph 94.6 0.15 3.2E-06 48.2 8.1 87 231-320 87-184 (221)
161 TIGR01993 Pyr-5-nucltdase pyri 94.5 0.11 2.3E-06 47.7 6.9 83 232-317 84-180 (184)
162 PF03767 Acid_phosphat_B: HAD 94.3 0.068 1.5E-06 51.3 5.1 80 231-310 114-207 (229)
163 PRK10748 flavin mononucleotide 94.1 0.25 5.4E-06 47.4 8.8 82 232-319 113-205 (238)
164 TIGR01452 PGP_euk phosphoglyco 93.6 0.32 6.9E-06 48.0 8.6 81 234-316 145-241 (279)
165 KOG3120 Predicted haloacid deh 93.4 0.17 3.6E-06 47.6 5.7 87 232-320 84-208 (256)
166 KOG3040 Predicted sugar phosph 93.2 0.47 1E-05 44.2 8.2 52 223-274 14-68 (262)
167 COG1011 Predicted hydrolase (H 92.2 1.6 3.4E-05 41.0 11.0 114 232-349 99-227 (229)
168 PLN02151 trehalose-phosphatase 92.1 1.3 2.9E-05 45.1 10.7 56 210-266 96-153 (354)
169 TIGR01452 PGP_euk phosphoglyco 91.9 2.7 5.8E-05 41.4 12.5 97 214-319 4-108 (279)
170 PF08235 LNS2: LNS2 (Lipin/Ned 91.8 1.1 2.3E-05 40.3 8.5 88 230-317 25-141 (157)
171 COG0637 Predicted phosphatase/ 91.1 1.2 2.5E-05 42.5 8.6 88 230-319 84-183 (221)
172 TIGR02251 HIF-SF_euk Dullard-l 90.9 0.15 3.2E-06 46.2 2.2 85 231-316 41-133 (162)
173 TIGR01663 PNK-3'Pase polynucle 90.6 1.1 2.3E-05 48.3 8.7 102 213-314 169-303 (526)
174 TIGR01680 Veg_Stor_Prot vegeta 90.1 1.5 3.2E-05 43.0 8.4 79 230-308 143-235 (275)
175 COG0647 NagD Predicted sugar p 89.9 3.7 8E-05 40.3 11.0 106 225-341 17-131 (269)
176 TIGR01684 viral_ppase viral ph 89.6 0.74 1.6E-05 45.5 5.9 57 213-272 127-186 (301)
177 TIGR01493 HAD-SF-IA-v2 Haloaci 87.6 0.9 2E-05 40.9 4.9 75 232-313 90-174 (175)
178 PLN02177 glycerol-3-phosphate 87.5 21 0.00046 38.3 15.8 86 233-322 111-215 (497)
179 PF13242 Hydrolase_like: HAD-h 86.9 1.9 4.1E-05 33.2 5.7 60 281-343 6-74 (75)
180 PF12689 Acid_PPase: Acid Phos 85.5 3.4 7.4E-05 37.6 7.4 86 233-320 46-147 (169)
181 COG3700 AphA Acid phosphatase 85.5 1.6 3.5E-05 39.7 5.0 88 233-320 115-210 (237)
182 PHA03398 viral phosphatase sup 83.3 2.8 6E-05 41.6 6.1 57 213-272 129-188 (303)
183 TIGR01460 HAD-SF-IIA Haloacid 81.9 17 0.00037 34.7 11.1 84 227-316 9-101 (236)
184 TIGR02244 HAD-IG-Ncltidse HAD 77.7 10 0.00023 38.6 8.3 37 234-270 186-223 (343)
185 COG0241 HisB Histidinol phosph 77.2 8.7 0.00019 35.4 6.9 85 233-317 32-144 (181)
186 PTZ00445 p36-lilke protein; Pr 77.2 10 0.00022 35.8 7.4 113 204-316 35-199 (219)
187 cd02071 MM_CoA_mut_B12_BD meth 76.3 12 0.00026 31.8 7.3 68 221-289 51-120 (122)
188 TIGR01456 CECR5 HAD-superfamil 75.9 11 0.00024 38.0 8.0 85 225-315 9-104 (321)
189 PRK02261 methylaspartate mutas 75.8 21 0.00045 31.2 8.7 83 206-290 26-131 (137)
190 TIGR01689 EcbF-BcbF capsule bi 75.2 6.9 0.00015 33.8 5.4 32 231-262 23-54 (126)
191 PLN02423 phosphomannomutase 74.7 3.3 7.1E-05 40.0 3.7 38 283-320 188-230 (245)
192 PF02358 Trehalose_PPase: Treh 74.6 7.4 0.00016 37.1 6.1 49 218-266 3-54 (235)
193 PF05822 UMPH-1: Pyrimidine 5' 74.3 3.1 6.7E-05 40.2 3.3 116 231-346 89-239 (246)
194 COG0078 ArgF Ornithine carbamo 73.7 15 0.00033 36.5 7.9 93 205-308 64-166 (310)
195 TIGR01501 MthylAspMutase methy 70.2 28 0.0006 30.4 8.0 75 206-282 24-120 (134)
196 COG1877 OtsB Trehalose-6-phosp 69.4 49 0.0011 32.5 10.4 66 206-271 12-80 (266)
197 PRK14194 bifunctional 5,10-met 69.2 27 0.00059 34.9 8.7 62 277-338 138-209 (301)
198 KOG1250 Threonine/serine dehyd 68.0 15 0.00032 37.9 6.5 92 213-312 81-177 (457)
199 PF04312 DUF460: Protein of un 66.8 64 0.0014 28.3 9.4 72 219-293 50-123 (138)
200 PRK14179 bifunctional 5,10-met 65.4 39 0.00085 33.5 9.0 62 277-338 137-208 (284)
201 TIGR01459 HAD-SF-IIA-hyp4 HAD- 64.4 6.4 0.00014 37.8 3.2 82 234-317 140-236 (242)
202 PF00389 2-Hacid_dh: D-isomer 63.7 74 0.0016 27.1 9.6 85 229-321 3-89 (133)
203 COG1171 IlvA Threonine dehydra 63.2 14 0.0003 37.6 5.5 60 251-313 77-138 (347)
204 COG2503 Predicted secreted aci 61.4 33 0.00073 33.0 7.2 77 232-309 122-207 (274)
205 cd02072 Glm_B12_BD B12 binding 59.6 52 0.0011 28.5 7.6 73 207-281 23-117 (128)
206 TIGR00640 acid_CoA_mut_C methy 58.9 48 0.001 28.8 7.4 71 220-291 53-125 (132)
207 PF12710 HAD: haloacid dehalog 58.6 4.9 0.00011 36.5 1.2 13 100-112 1-13 (192)
208 KOG2882 p-Nitrophenyl phosphat 57.6 45 0.00097 33.2 7.6 88 225-316 31-126 (306)
209 TIGR02250 FCP1_euk FCP1-like p 54.1 24 0.00052 31.6 4.9 41 231-272 57-97 (156)
210 PRK14189 bifunctional 5,10-met 54.1 69 0.0015 31.8 8.5 64 277-340 137-210 (285)
211 PF06506 PrpR_N: Propionate ca 53.8 17 0.00038 33.0 4.0 107 236-360 65-172 (176)
212 PRK03692 putative UDP-N-acetyl 52.4 1.2E+02 0.0026 29.3 9.7 125 238-364 95-234 (243)
213 KOG3085 Predicted hydrolase (H 52.3 46 0.001 32.0 6.7 83 235-321 116-213 (237)
214 TIGR03849 arch_ComA phosphosul 49.9 68 0.0015 30.9 7.4 59 236-296 42-113 (237)
215 PF00763 THF_DHG_CYH: Tetrahyd 49.7 23 0.00049 30.1 3.8 67 230-296 9-86 (117)
216 COG1778 Low specificity phosph 49.4 10 0.00023 34.0 1.7 26 91-116 2-27 (170)
217 PF00875 DNA_photolyase: DNA p 49.1 43 0.00094 29.8 5.8 71 239-311 57-134 (165)
218 cd00860 ThrRS_anticodon ThrRS 48.4 46 0.001 25.9 5.3 46 227-272 7-53 (91)
219 TIGR00603 rad25 DNA repair hel 47.1 1.3E+02 0.0029 34.0 10.2 68 246-320 494-567 (732)
220 TIGR00696 wecB_tagA_cpsF bacte 45.4 1.1E+02 0.0024 28.0 7.8 118 238-357 38-171 (177)
221 PRK14182 bifunctional 5,10-met 45.0 32 0.00069 34.0 4.5 67 229-295 9-86 (282)
222 PF05374 Mu-conotoxin: Mu-Cono 44.4 11 0.00025 21.7 0.7 11 460-470 12-22 (22)
223 PF13380 CoA_binding_2: CoA bi 43.8 35 0.00077 28.8 4.1 39 234-272 65-104 (116)
224 CHL00200 trpA tryptophan synth 43.7 2.2E+02 0.0048 27.8 10.2 91 229-321 125-231 (263)
225 PRK14167 bifunctional 5,10-met 43.6 52 0.0011 32.9 5.8 60 277-338 136-211 (297)
226 PLN02423 phosphomannomutase 43.3 46 0.001 32.0 5.4 45 214-262 9-53 (245)
227 PRK14192 bifunctional 5,10-met 43.2 39 0.00085 33.4 4.9 67 229-295 11-89 (283)
228 PRK14169 bifunctional 5,10-met 43.0 53 0.0011 32.5 5.7 63 277-339 135-207 (282)
229 PF02679 ComA: (2R)-phospho-3- 42.4 54 0.0012 31.7 5.5 65 236-302 55-134 (244)
230 PF04273 DUF442: Putative phos 42.4 1.5E+02 0.0032 24.9 7.6 68 238-305 17-97 (110)
231 cd01423 MGS_CPS_I_III Methylgl 42.3 1.1E+02 0.0023 25.5 6.9 65 226-295 4-70 (116)
232 KOG2882 p-Nitrophenyl phosphat 41.4 3.8E+02 0.0082 26.8 12.6 43 275-317 220-264 (306)
233 PTZ00445 p36-lilke protein; Pr 41.2 51 0.0011 31.2 5.0 69 232-301 26-97 (219)
234 PRK14170 bifunctional 5,10-met 40.8 40 0.00087 33.4 4.5 67 229-295 10-87 (284)
235 KOG1123 RNA polymerase II tran 40.0 1.8E+02 0.0039 31.3 9.1 90 226-321 520-615 (776)
236 PLN02645 phosphoglycolate phos 39.9 52 0.0011 32.8 5.3 58 288-348 239-307 (311)
237 PF03129 HGTP_anticodon: Antic 39.8 67 0.0015 25.4 5.0 48 225-272 3-54 (94)
238 KOG3109 Haloacid dehalogenase- 39.5 50 0.0011 31.4 4.6 89 225-316 92-199 (244)
239 PRK06381 threonine synthase; V 39.3 91 0.002 31.1 7.0 70 236-308 50-122 (319)
240 COG4229 Predicted enolase-phos 39.1 1.1E+02 0.0024 28.3 6.6 83 229-316 100-198 (229)
241 PRK14166 bifunctional 5,10-met 39.1 45 0.00097 33.0 4.5 66 230-295 10-86 (282)
242 PLN02565 cysteine synthase 39.0 1.1E+02 0.0024 30.8 7.5 68 236-306 49-124 (322)
243 PRK14191 bifunctional 5,10-met 38.8 65 0.0014 31.9 5.6 62 277-339 136-208 (285)
244 cd02067 B12-binding B12 bindin 38.5 1.1E+02 0.0023 25.6 6.3 51 222-272 52-104 (119)
245 cd01994 Alpha_ANH_like_IV This 37.2 1.5E+02 0.0032 27.5 7.5 15 258-272 46-60 (194)
246 cd00532 MGS-like MGS-like doma 36.5 1.6E+02 0.0034 24.5 6.9 62 226-294 3-65 (112)
247 cd05017 SIS_PGI_PMI_1 The memb 36.0 62 0.0013 27.1 4.5 37 234-272 56-92 (119)
248 PRK01713 ornithine carbamoyltr 36.0 2.7E+02 0.0059 28.2 9.8 104 207-320 68-186 (334)
249 cd04726 KGPDC_HPS 3-Keto-L-gul 35.9 2.9E+02 0.0062 25.2 9.4 82 236-321 91-186 (202)
250 PLN03064 alpha,alpha-trehalose 35.3 75 0.0016 36.9 6.1 71 201-271 580-662 (934)
251 PRK06450 threonine synthase; V 35.2 1.4E+02 0.0029 30.4 7.5 73 236-311 84-159 (338)
252 PRK08813 threonine dehydratase 35.1 1.1E+02 0.0025 31.2 6.9 71 236-309 67-141 (349)
253 TIGR03679 arCOG00187 arCOG0018 34.6 2.3E+02 0.0049 26.7 8.5 48 256-305 42-96 (218)
254 PRK14175 bifunctional 5,10-met 34.5 58 0.0013 32.3 4.5 84 229-312 11-111 (286)
255 cd00859 HisRS_anticodon HisRS 34.5 93 0.002 23.7 5.0 46 226-271 6-52 (91)
256 TIGR03679 arCOG00187 arCOG0018 34.5 1.1E+02 0.0025 28.8 6.4 57 236-296 74-135 (218)
257 cd06279 PBP1_LacI_like_3 Ligan 34.3 1.9E+02 0.0041 27.7 8.2 58 242-302 28-86 (283)
258 TIGR00262 trpA tryptophan synt 33.8 3.4E+02 0.0074 26.3 9.8 89 230-321 122-227 (256)
259 TIGR02726 phenyl_P_delta pheny 33.7 22 0.00047 32.3 1.3 26 92-117 2-27 (169)
260 TIGR02370 pyl_corrinoid methyl 33.5 62 0.0014 30.0 4.4 66 205-272 106-188 (197)
261 PF02401 LYTB: LytB protein; 33.0 1.1E+02 0.0023 30.3 6.1 202 82-323 35-265 (281)
262 PRK14188 bifunctional 5,10-met 32.8 65 0.0014 32.1 4.6 67 229-295 10-88 (296)
263 TIGR00249 sixA phosphohistidin 32.7 1.5E+02 0.0031 26.2 6.5 77 229-305 23-110 (152)
264 PF05761 5_nucleotid: 5' nucle 32.1 1.1E+02 0.0025 32.3 6.5 35 235-269 186-220 (448)
265 PRK11840 bifunctional sulfur c 31.5 1E+02 0.0023 31.0 5.7 75 230-306 176-259 (326)
266 PRK13125 trpA tryptophan synth 31.5 3.1E+02 0.0067 26.2 9.0 87 235-321 116-214 (244)
267 cd00958 DhnA Class I fructose- 31.3 1.3E+02 0.0028 28.5 6.3 87 231-321 105-214 (235)
268 cd06167 LabA_like LabA_like pr 31.1 1.5E+02 0.0033 25.5 6.3 27 286-312 113-140 (149)
269 PRK04302 triosephosphate isome 31.1 3E+02 0.0065 25.9 8.7 84 234-321 100-202 (223)
270 PRK15424 propionate catabolism 31.0 5.2E+02 0.011 28.1 11.5 71 236-307 95-166 (538)
271 PLN02616 tetrahydrofolate dehy 30.8 72 0.0016 32.7 4.6 67 229-295 81-159 (364)
272 PRK05265 pyridoxine 5'-phospha 30.7 2E+02 0.0044 27.7 7.2 38 235-273 113-150 (239)
273 PLN03063 alpha,alpha-trehalose 30.6 88 0.0019 35.8 5.8 70 201-270 496-571 (797)
274 PRK14174 bifunctional 5,10-met 30.3 71 0.0015 31.8 4.4 67 229-295 9-87 (295)
275 PRK14178 bifunctional 5,10-met 30.3 2E+02 0.0044 28.4 7.5 61 277-338 131-202 (279)
276 COG1832 Predicted CoA-binding 30.0 2.4E+02 0.0052 24.8 6.9 86 221-310 16-112 (140)
277 PRK14186 bifunctional 5,10-met 29.9 73 0.0016 31.8 4.4 67 229-295 10-88 (297)
278 PRK14184 bifunctional 5,10-met 29.8 77 0.0017 31.5 4.5 66 230-295 10-87 (286)
279 PRK05234 mgsA methylglyoxal sy 29.8 2.7E+02 0.0057 24.5 7.5 67 225-296 7-75 (142)
280 PF12017 Tnp_P_element: Transp 29.7 76 0.0016 30.6 4.3 37 237-273 198-234 (236)
281 TIGR01127 ilvA_1Cterm threonin 29.7 1.3E+02 0.0027 31.0 6.4 71 236-309 34-108 (380)
282 PTZ00314 inosine-5'-monophosph 29.7 5.6E+02 0.012 27.6 11.3 108 204-316 184-304 (495)
283 PRK14190 bifunctional 5,10-met 29.6 79 0.0017 31.3 4.5 67 229-295 11-88 (284)
284 PRK13958 N-(5'-phosphoribosyl) 29.6 2.4E+02 0.0053 26.4 7.7 71 220-294 21-95 (207)
285 PRK14168 bifunctional 5,10-met 29.3 86 0.0019 31.3 4.8 67 229-295 11-89 (297)
286 PF06506 PrpR_N: Propionate ca 29.1 52 0.0011 29.9 3.0 77 231-312 16-96 (176)
287 PRK14180 bifunctional 5,10-met 29.1 80 0.0017 31.3 4.5 84 229-312 9-110 (282)
288 KOG1618 Predicted phosphatase 29.1 2.6E+02 0.0057 28.2 7.9 78 224-305 43-130 (389)
289 COG4996 Predicted phosphatase 28.8 94 0.002 27.2 4.2 41 232-272 41-81 (164)
290 PRK14172 bifunctional 5,10-met 28.7 84 0.0018 31.0 4.5 67 229-295 10-88 (278)
291 PLN02591 tryptophan synthase 28.7 3.7E+02 0.0081 26.0 9.0 88 231-321 114-218 (250)
292 TIGR03882 cyclo_dehyd_2 bacter 28.4 4.7E+02 0.01 24.1 9.3 100 234-355 58-160 (193)
293 PRK01222 N-(5'-phosphoribosyl) 28.1 2E+02 0.0043 27.0 6.8 71 220-294 23-97 (210)
294 PLN02527 aspartate carbamoyltr 28.1 2.8E+02 0.006 27.8 8.2 70 234-306 83-162 (306)
295 PRK14185 bifunctional 5,10-met 28.0 89 0.0019 31.1 4.6 66 230-295 10-87 (293)
296 TIGR02765 crypto_DASH cryptoch 28.0 1.5E+02 0.0032 31.0 6.6 58 237-296 63-125 (429)
297 PRK10481 hypothetical protein; 27.8 2.8E+02 0.0061 26.4 7.8 119 181-306 64-194 (224)
298 PRK14171 bifunctional 5,10-met 27.8 72 0.0016 31.7 3.9 67 229-295 10-88 (288)
299 cd05014 SIS_Kpsf KpsF-like pro 27.8 39 0.00084 28.4 1.8 29 234-262 60-88 (128)
300 cd01917 ACS_2 Acetyl-CoA synth 27.7 2.2E+02 0.0048 28.1 7.1 104 240-347 163-278 (287)
301 COG0135 TrpF Phosphoribosylant 27.7 3.3E+02 0.0072 25.7 8.1 65 220-284 22-89 (208)
302 PRK14193 bifunctional 5,10-met 27.4 91 0.002 30.9 4.5 67 229-295 11-88 (284)
303 KOG2961 Predicted hydrolase (H 27.2 2.1E+02 0.0045 25.8 6.1 96 211-309 42-154 (190)
304 PLN02897 tetrahydrofolate dehy 27.2 88 0.0019 31.9 4.4 67 229-295 64-142 (345)
305 COG1609 PurR Transcriptional r 27.0 3.7E+02 0.0081 26.9 9.1 106 204-312 130-251 (333)
306 TIGR00216 ispH_lytB (E)-4-hydr 26.8 4.1E+02 0.0088 26.3 8.9 99 224-324 156-265 (280)
307 PRK07428 nicotinate-nucleotide 26.8 6.4E+02 0.014 25.0 11.0 96 236-336 181-284 (288)
308 cd04724 Tryptophan_synthase_al 26.8 3.3E+02 0.0072 26.0 8.3 74 235-308 116-199 (242)
309 PRK08197 threonine synthase; V 26.7 2.1E+02 0.0045 29.7 7.3 70 236-308 114-186 (394)
310 PRK03515 ornithine carbamoyltr 26.3 2.8E+02 0.0061 28.2 8.0 91 206-306 66-167 (336)
311 PRK14994 SAM-dependent 16S rib 26.0 2.8E+02 0.006 27.5 7.7 89 204-302 77-171 (287)
312 cd00079 HELICc Helicase superf 25.9 2.9E+02 0.0063 22.5 7.0 32 270-301 52-84 (131)
313 cd04906 ACT_ThrD-I_1 First of 25.9 77 0.0017 24.9 3.1 37 226-263 43-80 (85)
314 COG5012 Predicted cobalamin bi 25.7 65 0.0014 30.6 3.0 51 222-272 157-208 (227)
315 COG0084 TatD Mg-dependent DNas 25.7 2.3E+02 0.0051 27.6 7.0 72 231-303 13-94 (256)
316 smart00023 COLIPASE Colipase. 25.7 43 0.00094 27.0 1.5 27 436-462 18-44 (95)
317 PLN02342 ornithine carbamoyltr 25.6 3E+02 0.0066 28.1 8.1 90 207-306 107-205 (348)
318 cd05008 SIS_GlmS_GlmD_1 SIS (S 25.6 54 0.0012 27.5 2.3 28 234-261 59-86 (126)
319 PRK09479 glpX fructose 1,6-bis 25.5 1.1E+02 0.0023 30.8 4.5 82 229-312 163-282 (319)
320 PRK14183 bifunctional 5,10-met 25.3 1.1E+02 0.0023 30.4 4.6 66 230-295 10-87 (281)
321 COG1157 FliI Flagellar biosynt 25.3 1.2E+02 0.0026 31.7 5.0 81 222-321 192-277 (441)
322 PRK08329 threonine synthase; V 25.3 3E+02 0.0065 27.9 8.1 65 236-303 91-158 (347)
323 COG0731 Fe-S oxidoreductases [ 25.2 3.1E+02 0.0067 27.4 7.8 76 230-309 90-189 (296)
324 PRK14176 bifunctional 5,10-met 25.1 82 0.0018 31.3 3.7 67 229-295 16-94 (287)
325 cd04728 ThiG Thiazole synthase 25.1 6.4E+02 0.014 24.5 10.4 76 230-307 102-186 (248)
326 PRK13670 hypothetical protein; 25.1 5.9E+02 0.013 26.4 10.2 92 222-313 2-112 (388)
327 PF12273 RCR: Chitin synthesis 25.0 56 0.0012 28.1 2.3 16 6-21 1-16 (130)
328 COG0313 Predicted methyltransf 25.0 3.4E+02 0.0074 26.7 7.8 83 204-296 70-156 (275)
329 PRK06260 threonine synthase; V 25.0 2.5E+02 0.0054 29.1 7.5 70 236-308 102-175 (397)
330 KOG0208 Cation transport ATPas 24.9 1.2E+02 0.0027 35.1 5.3 80 226-306 641-733 (1140)
331 PF14097 SpoVAE: Stage V sporu 24.8 1.3E+02 0.0028 27.4 4.5 52 250-303 1-61 (180)
332 PF14862 Defensin_big: Big def 24.7 17 0.00036 28.1 -0.9 32 435-470 44-75 (76)
333 PLN02550 threonine dehydratase 24.7 2E+02 0.0043 31.7 6.9 71 236-309 143-217 (591)
334 PRK14187 bifunctional 5,10-met 24.6 1E+02 0.0022 30.8 4.3 67 229-295 10-88 (294)
335 KOG0541 Alkyl hydroperoxide re 24.5 1.3E+02 0.0027 27.1 4.3 61 210-272 42-103 (171)
336 PRK06846 putative deaminase; V 24.2 7.6E+02 0.017 25.4 11.1 85 237-321 208-309 (410)
337 PF01729 QRPTase_C: Quinolinat 24.2 4.5E+02 0.0098 23.8 8.2 84 236-321 65-155 (169)
338 COG2099 CobK Precorrin-6x redu 24.2 3.9E+02 0.0084 26.1 7.9 79 236-316 54-148 (257)
339 cd00738 HGTP_anticodon HGTP an 24.1 1.6E+02 0.0036 22.7 4.8 40 232-271 15-55 (94)
340 PF03031 NIF: NLI interacting 24.1 90 0.0019 27.4 3.6 38 233-271 37-74 (159)
341 PRK11761 cysM cysteine synthas 24.0 2.9E+02 0.0063 27.3 7.5 65 236-303 46-117 (296)
342 PF00072 Response_reg: Respons 24.0 3.6E+02 0.0078 21.2 7.5 50 235-286 56-108 (112)
343 PRK12483 threonine dehydratase 23.9 1.1E+02 0.0023 33.2 4.7 53 254-309 92-145 (521)
344 PF06941 NT5C: 5' nucleotidase 23.9 66 0.0014 29.5 2.7 27 232-258 73-99 (191)
345 PRK09224 threonine dehydratase 23.8 1.6E+02 0.0034 31.7 6.0 52 255-309 76-128 (504)
346 TIGR03556 photolyase_8HDF deox 23.6 2.5E+02 0.0054 29.9 7.3 58 237-296 57-119 (471)
347 PRK00856 pyrB aspartate carbam 23.5 4.7E+02 0.01 26.1 8.9 91 206-305 66-166 (305)
348 PRK10792 bifunctional 5,10-met 23.5 1.2E+02 0.0026 30.1 4.5 67 229-295 11-89 (285)
349 PRK02255 putrescine carbamoylt 23.5 3.4E+02 0.0074 27.6 8.0 91 206-306 63-165 (338)
350 cd01453 vWA_transcription_fact 23.1 3.6E+02 0.0079 24.4 7.5 52 236-290 124-176 (183)
351 cd01516 FBPase_glpX Bacterial 23.0 1.3E+02 0.0028 30.1 4.5 82 229-312 160-279 (309)
352 TIGR02329 propionate_PrpR prop 22.8 8.7E+02 0.019 26.3 11.4 103 236-357 85-188 (526)
353 PRK05742 nicotinate-nucleotide 22.8 6.2E+02 0.014 24.9 9.4 83 236-321 175-261 (277)
354 cd02070 corrinoid_protein_B12- 22.8 1.1E+02 0.0025 28.3 4.1 66 205-272 104-186 (201)
355 PLN03013 cysteine synthase 22.8 2.9E+02 0.0062 29.2 7.4 66 236-304 157-230 (429)
356 PRK04284 ornithine carbamoyltr 22.6 4E+02 0.0086 27.0 8.2 90 207-306 67-166 (332)
357 PRK13222 phosphoglycolate phos 22.5 50 0.0011 30.6 1.7 18 94-111 3-20 (226)
358 PF13309 HTH_22: HTH domain 22.3 1.5E+02 0.0032 22.2 3.9 30 263-296 8-37 (64)
359 PF08645 PNK3P: Polynucleotide 22.3 74 0.0016 28.5 2.6 40 234-273 31-84 (159)
360 COG2237 Predicted membrane pro 22.2 1.1E+02 0.0023 31.3 3.9 67 229-312 39-116 (364)
361 TIGR01139 cysK cysteine syntha 22.0 3.3E+02 0.0072 26.7 7.5 66 236-304 40-112 (298)
362 PRK14177 bifunctional 5,10-met 21.7 1.3E+02 0.0028 29.8 4.4 67 229-295 11-89 (284)
363 cd00640 Trp-synth-beta_II Tryp 21.7 3.8E+02 0.0082 25.3 7.7 70 236-308 34-109 (244)
364 PRK12562 ornithine carbamoyltr 21.7 4.2E+02 0.0092 26.9 8.2 90 207-306 67-167 (334)
365 cd00861 ProRS_anticodon_short 21.7 1.3E+02 0.0028 23.5 3.8 22 232-253 15-36 (94)
366 PLN02363 phosphoribosylanthran 21.7 3.9E+02 0.0085 26.0 7.7 70 220-293 67-141 (256)
367 cd01994 Alpha_ANH_like_IV This 21.3 2.9E+02 0.0064 25.5 6.5 62 235-300 75-142 (194)
368 PRK14805 ornithine carbamoyltr 21.2 5.3E+02 0.012 25.7 8.7 91 206-306 59-158 (302)
369 TIGR00260 thrC threonine synth 21.1 2.6E+02 0.0057 27.8 6.7 70 237-309 59-132 (328)
370 COG1916 Uncharacterized homolo 21.1 1.9E+02 0.0041 29.6 5.4 69 235-316 99-167 (388)
371 TIGR00559 pdxJ pyridoxine 5'-p 21.0 3.4E+02 0.0074 26.1 6.9 38 235-273 110-147 (237)
372 cd05710 SIS_1 A subgroup of th 20.9 73 0.0016 26.8 2.2 28 234-261 60-87 (120)
373 PRK12415 fructose 1,6-bisphosp 20.9 1.5E+02 0.0032 29.8 4.6 82 229-312 161-280 (322)
374 TIGR00330 glpX fructose-1,6-bi 20.9 76 0.0016 31.7 2.5 26 229-256 160-185 (321)
375 PLN03142 Probable chromatin-re 20.8 3.2E+02 0.0069 32.3 7.9 57 239-296 478-537 (1033)
376 cd01305 archeal_chlorohydrolas 20.8 5.5E+02 0.012 24.5 8.7 80 237-321 127-219 (263)
377 COG0415 PhrB Deoxyribodipyrimi 20.7 2.6E+02 0.0057 29.7 6.6 59 236-296 56-119 (461)
378 cd06533 Glyco_transf_WecG_TagA 20.7 3.9E+02 0.0084 24.0 7.1 69 238-307 36-111 (171)
379 TIGR01124 ilvA_2Cterm threonin 20.7 2.4E+02 0.0051 30.4 6.5 56 251-309 68-125 (499)
380 PLN02516 methylenetetrahydrofo 20.6 1.4E+02 0.003 29.9 4.3 67 229-295 17-95 (299)
381 PF03808 Glyco_tran_WecB: Glyc 20.6 4.1E+02 0.009 23.8 7.2 116 238-355 38-170 (172)
382 PF12263 DUF3611: Protein of u 20.4 4E+02 0.0086 24.6 7.0 37 347-383 79-125 (183)
383 PF01380 SIS: SIS domain SIS d 20.3 1.5E+02 0.0032 24.7 4.0 33 232-264 64-96 (131)
384 PF02219 MTHFR: Methylenetetra 20.3 1.2E+02 0.0025 30.0 3.8 40 222-261 72-112 (287)
385 TIGR03489 cas_csp1 CRISPR-asso 20.2 1.3E+02 0.0027 29.3 3.7 30 280-309 230-259 (292)
386 TIGR03822 AblA_like_2 lysine-2 20.1 6.8E+02 0.015 25.0 9.4 85 204-295 190-293 (321)
387 PLN02954 phosphoserine phospha 20.0 74 0.0016 29.6 2.3 24 88-111 3-26 (224)
No 1
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-79 Score=658.00 Aligned_cols=382 Identities=36% Similarity=0.537 Sum_probs=346.9
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
++++.|++|.+++++++.|+.+ +++.+..|... ....+..|+++|||++++|+ ++..|+.+++
T Consensus 323 Dr~a~~fvp~vl~ia~l~f~~w--~~~~~~~~~~a-------------~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA 387 (713)
T COG2217 323 DRVASYFVPVVLVIAALTFALW--PLFGGGDWETA-------------LYRALAVLVIACPCALGLATPTAILVGIGRAA 387 (713)
T ss_pred HHHHHccHHHHHHHHHHHHHHH--HHhcCCcHHHH-------------HHHHHhheeeeCccHHHhHHHHHHHHHHHHHH
Confidence 4788999998888887766632 11221122111 11234567899999999986 8999999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+|||+|++.++|+++++|+++||||||||+|+|+|.++...++ ++++++.+++++|..|+||+++||+++++.++.
T Consensus 388 ~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~~- 464 (713)
T COG2217 388 RRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--DEDELLALAAALEQHSEHPLAKAIVKAAAERGL- 464 (713)
T ss_pred hCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--CHHHHHHHHHHHHhcCCChHHHHHHHHHHhcCC-
Confidence 99999999999999999999999999999999999999998855 889999999999999999999999999988872
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCc
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSG 236 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~ 236 (473)
..+.+|++++|+|+++.++|+.+.+|+++++.+.+.+.. +..+.+.++|.++++++.|++++|+|.++|++||+
T Consensus 465 ---~~~~~~~~i~G~Gv~~~v~g~~v~vG~~~~~~~~~~~~~~~~~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~ 541 (713)
T COG2217 465 ---PDVEDFEEIPGRGVEAEVDGERVLVGNARLLGEEGIDLPLLSERIEALESEGKTVVFVAVDGKLVGVIALADELRPD 541 (713)
T ss_pred ---CCccceeeeccCcEEEEECCEEEEEcCHHHHhhcCCCccchhhhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChh
Confidence 345569999999999999999999999999988775543 34577788999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
++++|++||++|++++|+||||..+|+++|+++||+ +++++++||||.++|+.||++| +|+|||||+||+|||++||
T Consensus 542 a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~Ad 619 (713)
T COG2217 542 AKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAAD 619 (713)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcC
Confidence 999999999999999999999999999999999998 9999999999999999999998 9999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCL 395 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l 395 (473)
|||+|| +|+|+++++||++++++|++.++++++++|+++++|+||+.|++.||+++++++++|+.+||++.+.|.+|++
T Consensus 620 VGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~l~p~~A~~am~~SSv 698 (713)
T COG2217 620 VGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLLTPWIAALAMSGSSV 698 (713)
T ss_pred eeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHcccHH
Confidence 999999 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhcc
Q 038599 396 VVILNSMLLLKN 407 (473)
Q Consensus 396 ~v~~ns~~l~~~ 407 (473)
+|++||+|+++.
T Consensus 699 ~VvlNaLRL~~~ 710 (713)
T COG2217 699 LVVLNALRLLRS 710 (713)
T ss_pred HHHHHHHHhhcc
Confidence 999999999885
No 2
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-75 Score=618.31 Aligned_cols=433 Identities=35% Similarity=0.528 Sum_probs=371.3
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhc----chhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIY----HPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAF 75 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~----~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~ 75 (473)
++++.+++|.++++.+..++.|..... .+..|.. +.......++..++++|||.|.+|+ |+++|+
T Consensus 490 Dkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~---------~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 490 DKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFD---------AFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred HHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhH---------HHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 578899999999988876665432211 1111210 0111123455678899999999984 888999
Q ss_pred HHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHH
Q 038599 76 SKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARS 155 (473)
Q Consensus 76 ~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~ 155 (473)
...+++|+|+|+++.+|.+.++++|+||||||||+|++.|.++....+..+.++++.++++.|..++||+++||++|+++
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~ 640 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSEHPIGKAIVDYAKE 640 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987778899999999999999999999999999999
Q ss_pred cCCCCCCCCccccccccCCc--eeEEecCeEEEEccccccCCCCCCcchh----HHHHhcCCceeeEeeeCCeEEEEEEe
Q 038599 156 LAIEPVPENVEDFQNFPGEG--IFGKIHGNVIYIGNRRIGPRTGCSKDSI----AEAKCTGGKTRGYVYLGATPVGTFSL 229 (473)
Q Consensus 156 ~~~~~~~~~v~~~~~~~g~g--v~~~v~g~~~~iG~~~~~~~~~~~~~~~----~~~~~~~G~~vi~va~d~~~lG~i~l 229 (473)
....+.+..+.+|+.+||+| +...++++++.+||.+++.+++...++. .++....|+++.|++.|++++|++.+
T Consensus 641 ~~~~~~~~~~~~~~~~pg~g~~~~~~~~~~~i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l 720 (951)
T KOG0207|consen 641 KLVEPNPEGVLSFEYFPGEGIYVTVTVDGNEVLIGNKEWMSRNGCSIPDDILDALTESERKGQTVVYVAVNGQLVGVFAL 720 (951)
T ss_pred cccccCccccceeecccCCCcccceEEeeeEEeechHHHHHhcCCCCchhHHHhhhhHhhcCceEEEEEECCEEEEEEEe
Confidence 88666677888999999999 6678899999999999999998887654 34556789999999999999999999
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
+|++|||+..+|+.||++|++++|+||||..+|.++|+++||+ +||+++.|+||.++|+.||+++ +|+|||||+||+
T Consensus 721 ~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDa 798 (951)
T KOG0207|consen 721 EDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDA 798 (951)
T ss_pred ccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCcc
Confidence 9999999999999999999999999999999999999999988 9999999999999999999997 999999999999
Q ss_pred HHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------HH
Q 038599 309 PALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGY------PL 382 (473)
Q Consensus 309 ~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~------~~ 382 (473)
|||++|||||++| .|++.|.++||+|++.+|+.+++..++++|++.+++|+|+.|++.||++++++++++| .+
T Consensus 799 PALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~ 877 (951)
T KOG0207|consen 799 PALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLP 877 (951)
T ss_pred HHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCccccC
Confidence 9999999999999 8899999999999999999999999999999999999999999999999999987653 38
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccccccCCccccc--cccc-----cccccccccchh--hcccccCCCccccc
Q 038599 383 VWVAVLTDVGTCLVVILNSMLLLKNNLEEEGGFWKSK--YGTF-----SLSCKKDEDKEA--LNVKNCRSRCCEAT 449 (473)
Q Consensus 383 ~~~a~l~~~~s~l~v~~ns~~l~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~ 449 (473)
||.|.+.|.++++.|++||+++++++..... .+++ ..++ .+.+ .+.+.+. ....+|..+||.++
T Consensus 878 Pw~A~lama~SSvsVv~sSllLk~~k~p~~~--~~~~~e~~~~~~~~~~~~~-~~~~~gl~~~~~~~~k~~~~~~~ 950 (951)
T KOG0207|consen 878 PWMASLAMAASSVSVVLSSLLLKRYKKPTIN--KLYRYEAETSSSIGQKSES-VDLHRGLDDKGRKSCKSGCCSNK 950 (951)
T ss_pred chHHHHHHHhhhHHHhhhHHHHhhccccccc--cceeccccccccccccccc-ceEEeccccccccCcccccccCC
Confidence 9999999999999999999999888754322 2222 2211 1111 2333333 36777888888764
No 3
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.7e-66 Score=572.35 Aligned_cols=385 Identities=32% Similarity=0.463 Sum_probs=339.6
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
+++++|++|+++++++++++.+..+ + ...|... ....+..++++|||.+.+++ ++..++.+++
T Consensus 354 d~~a~~~~~~v~~~a~~~~~~~~~~-~-~~~~~~~-------------i~~a~svlviacPcaL~latP~a~~~~l~~aa 418 (741)
T PRK11033 354 DRFSRIYTPAIMLVALLVILVPPLL-F-AAPWQEW-------------IYRGLTLLLIGCPCALVISTPAAITSGLAAAA 418 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-c-cCCHHHH-------------HHHHHHHHHHhchhhhhhhhHHHHHHHHHHHH
Confidence 5678999999998888876643111 1 1111100 01123446788899988865 8888999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+||++|+++++|+++++|++|||||||||+|+|+|.+++.+ ++.++++++.+++++|..++||+++||++++++++..
T Consensus 419 r~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~-~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~ 497 (741)
T PRK11033 419 RRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA-TGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLA 497 (741)
T ss_pred HCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec-CCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999876 4567888999999999999999999999999888765
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHH
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALE 239 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~ 239 (473)
. ....+++.++|.|+++.++|+.+.+|+++++.+.........+++.++|++++++++|++++|++.|+|++|||+++
T Consensus 498 ~--~~~~~~~~~~g~Gv~~~~~g~~~~ig~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~ 575 (741)
T PRK11033 498 I--PEAESQRALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQINELESAGKTVVLVLRNDDVLGLIALQDTLRADARQ 575 (741)
T ss_pred C--CCCcceEEEeeEEEEEEECCEEEEEecchhhhhccHHHHHHHHHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHH
Confidence 3 34678888999999999999999999999986532222333567788999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHCCeeEE
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~AdvgIa 319 (473)
+|++||++|++++|+|||+..++.++++++||. ++++++|+||.++|+.||+.+.|+|+|||+||+|||++|||||+
T Consensus 576 ~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~v~mvGDgiNDapAl~~A~vgia 652 (741)
T PRK11033 576 AISELKALGIKGVMLTGDNPRAAAAIAGELGID---FRAGLLPEDKVKAVTELNQHAPLAMVGDGINDAPAMKAASIGIA 652 (741)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC---eecCCCHHHHHHHHHHHhcCCCEEEEECCHHhHHHHHhCCeeEE
Confidence 999999999999999999999999999999995 78899999999999999977799999999999999999999999
Q ss_pred eCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 038599 320 MGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 320 ~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l~v~~ 399 (473)
|| ++++.++++||++++++++..++++++++|+++++|++|+.|++.||+++++++++|+.+||+++++|.+++++|++
T Consensus 653 ~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~~~~~~a~~~~~~ss~~v~~ 731 (741)
T PRK11033 653 MG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGITGLWLAVLADSGATALVTA 731 (741)
T ss_pred ec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHcChHHHHHH
Confidence 99 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhhccc
Q 038599 400 NSMLLLKNN 408 (473)
Q Consensus 400 ns~~l~~~~ 408 (473)
||+|+++++
T Consensus 732 Nslrl~~~~ 740 (741)
T PRK11033 732 NALRLLRKR 740 (741)
T ss_pred HHHhhcccC
Confidence 999998654
No 4
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=5.5e-62 Score=538.15 Aligned_cols=385 Identities=20% Similarity=0.249 Sum_probs=304.2
Q ss_pred CccCchhHHHHHHHHHHHHHHHHh-hhcchh-HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLG-YIYHPL-QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~-~~~~~~-~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~la 79 (473)
+++++|+.++++++++++++.... +..... ...+.++++++..|+.+|...++ +++.++++|+
T Consensus 204 ~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~---------------~la~g~~r~a 268 (755)
T TIGR01647 204 SKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSV---------------TMAVGAAELA 268 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHH---------------HHHHHHHHHH
Confidence 356677777766665554443221 111111 22456667777888888877666 8999999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhh-hccCCChHHHHHHHHHHHcCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSI-ESKSSHPMAAALVDYARSLAI 158 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~-e~~s~hpi~~Ai~~~a~~~~~ 158 (473)
|+|+++|+++++|++|++|++|||||||||+|+|+|.+++..+++.+.++++.+++.. +..++||+++|+++++++.+.
T Consensus 269 k~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~ 348 (755)
T TIGR01647 269 KKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKE 348 (755)
T ss_pred hCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHH
Confidence 9999999999999999999999999999999999999998765446677788777654 477899999999998875431
Q ss_pred CCCCCCccccccc--cCCceeEEec----CeE--EEEccccccCCCCCCc-------chhHHHHhcCCceeeEeee----
Q 038599 159 EPVPENVEDFQNF--PGEGIFGKIH----GNV--IYIGNRRIGPRTGCSK-------DSIAEAKCTGGKTRGYVYL---- 219 (473)
Q Consensus 159 ~~~~~~v~~~~~~--~g~gv~~~v~----g~~--~~iG~~~~~~~~~~~~-------~~~~~~~~~~G~~vi~va~---- 219 (473)
........+..++ .++++.+.++ |+. +.+|+++.+.+.+... .+..+++.++|+|++++++
T Consensus 349 ~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~~e 428 (755)
T TIGR01647 349 ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEE 428 (755)
T ss_pred HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEcCC
Confidence 1101111122222 4667776662 544 4579999886544221 1234677889999999997
Q ss_pred -CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------
Q 038599 220 -GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------ 274 (473)
Q Consensus 220 -d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------ 274 (473)
+++|+|++.|+||+|||++++|++||++|++++|+|||+..+|.++|+++||...
T Consensus 429 ~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~ 508 (755)
T TIGR01647 429 GRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEM 508 (755)
T ss_pred CCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHH
Confidence 2389999999999999999999999999999999999999999999999999741
Q ss_pred ----ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 275 ----MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 275 ----~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.+|++++|+||.++|+.||++| .|+|+|||+||+|||++|||||+|| +|+++++++||++++++||+.++++++
T Consensus 509 ~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 509 VEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred HHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHH
Confidence 2899999999999999999999 8999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hhh-----HHHHHHHHHHHHHHHHHHHHhHh
Q 038599 350 LARKASTKLIQNVTLSVTVKGAVLVLAV-----AGY-----PLVWVAVLTDVGTCLVVILNSML 403 (473)
Q Consensus 350 ~~r~~~~~i~~n~~~~~~~n~~~~~la~-----~g~-----~~~~~a~l~~~~s~l~v~~ns~~ 403 (473)
+||++++++++|+.|.++.|+..+++.+ .++ +.+|+++++|. +++.+.++...
T Consensus 588 ~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~-~~~~l~~~~~~ 650 (755)
T TIGR01647 588 ESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDG-TIMTIAYDNVK 650 (755)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhH-hHhhccCCCCC
Confidence 9999999999999999999985443222 221 24688888885 46666666544
No 5
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.9e-61 Score=539.78 Aligned_cols=385 Identities=26% Similarity=0.376 Sum_probs=334.3
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
+++++|+.|++++++++.++.+... .....|.. .....+..++++|||.+.+++ ++..++.+++
T Consensus 434 d~~a~~~v~~v~~~a~~~~~~~~~~-~~~~~~~~-------------~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a 499 (834)
T PRK10671 434 DKISAVFVPVVVVIALVSAAIWYFF-GPAPQIVY-------------TLVIATTVLIIACPCALGLATPMSIISGVGRAA 499 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCchHHHH-------------HHHHHHHHHHHhcccchhhhHHHHHHHHHHHHH
Confidence 4567888888888777655433111 00001110 111233456777888877764 8889999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+||++|+++++|+++++|++|||||||||+|+|+|.++... ++.+.++++.+++++|..++||+++||+++++...
T Consensus 500 ~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~-~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~~-- 576 (834)
T PRK10671 500 EFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF-NGVDEAQALRLAAALEQGSSHPLARAILDKAGDMT-- 576 (834)
T ss_pred HCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc-CCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhCC--
Confidence 999999999999999999999999999999999999998876 34677889999999999999999999999886432
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCc
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSG 236 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~ 236 (473)
...+.+|++++|.|+++.++|+.+.+|+++++.+.+.... +..+++.++|.+++++++|+.++|++.+.|++||+
T Consensus 577 --~~~~~~~~~~~g~Gv~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~ 654 (834)
T PRK10671 577 --LPQVNGFRTLRGLGVSGEAEGHALLLGNQALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAIRDPLRSD 654 (834)
T ss_pred --CCCcccceEecceEEEEEECCEEEEEeCHHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEccCcchhh
Confidence 2356789999999999999999999999999876655422 22456678999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
++++|++|++.|+++.|+|||+..++..+++++||+ .++++..|++|.++++.++.++ .|+|+|||.||++|+++||
T Consensus 655 a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 732 (834)
T PRK10671 655 SVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQAD 732 (834)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999999999999999998 8999999999999999999998 8999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------Hh-hHHHHHHHH
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAV------AG-YPLVWVAVL 388 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~------~g-~~~~~~a~l 388 (473)
+||+|| ++++.++++||++++++++..|+++++++|+++++|++|+.|++.||++++++|+ +| +.+||++.+
T Consensus 733 vgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~ 811 (834)
T PRK10671 733 VGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGA 811 (834)
T ss_pred eeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHH
Confidence 999999 8999999999999999999999999999999999999999999999999999997 45 568999999
Q ss_pred HHHHHHHHHHHHhHhhhccc
Q 038599 389 TDVGTCLVVILNSMLLLKNN 408 (473)
Q Consensus 389 ~~~~s~l~v~~ns~~l~~~~ 408 (473)
.|.+|+++|++||+|+.+++
T Consensus 812 ~m~~ss~~vv~nslrl~~~~ 831 (834)
T PRK10671 812 AMALSSITVVSNANRLLRFK 831 (834)
T ss_pred HhcccceeehhhhHHhcCCC
Confidence 99999999999999996543
No 6
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=5.8e-61 Score=515.74 Aligned_cols=380 Identities=37% Similarity=0.535 Sum_probs=330.8
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
+++++|+.+++++++++.++.++.+... ..+...+++++...|..++...++ ++..++.+|+|+
T Consensus 167 ~~~a~~~~~~~l~~a~~~~~~~~~~~~~-~~~~~~~~vlv~~~P~al~l~~~~---------------~~~~~~~~~~~~ 230 (556)
T TIGR01525 167 DRIASYYVPAVLAIALLTFVVWLALGAL-GALYRALAVLVVACPCALGLATPV---------------AILVAIGVAARR 230 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc-hHHHHHHHHHhhccccchhehhHH---------------HHHHHHHHHHHC
Confidence 3567788888887777766654322111 222344455555566666655554 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC--HHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS--LGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~--~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
||++|+++++|+++++|++|||||||||+|+|+|.++...++ .+ .++++.+++++|..+.||+++||++++++.+.+
T Consensus 231 gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~-~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 231 GILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDD-ASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred CceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCC-CCccHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999987633 33 678899999999999999999999999987765
Q ss_pred CCCCCcc-ccccccCCceeEEecC-eEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccC
Q 038599 160 PVPENVE-DFQNFPGEGIFGKIHG-NVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCR 234 (473)
Q Consensus 160 ~~~~~v~-~~~~~~g~gv~~~v~g-~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr 234 (473)
... . +++++++.|+++.++| .++.+|+++++........ ...+++.++|++++++++|++++|.+.++|++|
T Consensus 310 ~~~---~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~ 386 (556)
T TIGR01525 310 LPK---QEDVEEVPGKGVEATVDGQEEVRIGNPRLLELAAEPISASPDLLNEGESQGKTVVFVAVDGELLGVIALRDQLR 386 (556)
T ss_pred ccc---ccCeeEecCCeEEEEECCeeEEEEecHHHHhhcCCCchhhHHHHHHHhhCCcEEEEEEECCEEEEEEEecccch
Confidence 421 3 6777899999999999 7999999998732222211 234566789999999999999999999999999
Q ss_pred CchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHH
Q 038599 235 SGALEAIKDLKSLG-IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 235 ~~a~~~I~~L~~~g-i~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~ 312 (473)
|+++++|++|+++| +++.|+|||+..++.++++++|+. .+|++..|++|.++++.+++.+ .|+|+|||.||++|++
T Consensus 387 ~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~ 464 (556)
T TIGR01525 387 PEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID--EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALA 464 (556)
T ss_pred HhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHh
Confidence 99999999999999 999999999999999999999998 8999999999999999999888 8999999999999999
Q ss_pred HCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHH
Q 038599 313 AVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVW-VAVLTDV 391 (473)
Q Consensus 313 ~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~-~a~l~~~ 391 (473)
+||+|+++| .+++.+++.||+++.++++..++++++++|++++++++|+.|+++||+++++++++|+.+|| .+.+.|.
T Consensus 465 ~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~~~p~~~aa~~m~ 543 (556)
T TIGR01525 465 AADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHE 543 (556)
T ss_pred hCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHh
Confidence 999999999 78999999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred HHHHHHHHHhHhh
Q 038599 392 GTCLVVILNSMLL 404 (473)
Q Consensus 392 ~s~l~v~~ns~~l 404 (473)
++++++++||+|+
T Consensus 544 ~ss~~v~lns~r~ 556 (556)
T TIGR01525 544 GSTVLVVLNSLRL 556 (556)
T ss_pred chHHHHHHHhhcC
Confidence 9999999999985
No 7
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=3.3e-61 Score=514.94 Aligned_cols=369 Identities=39% Similarity=0.541 Sum_probs=322.9
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
+++++|+.+++++++++.++.+..+...+......+++++...|..++...++ ++..++.+|+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~svlv~~~P~aL~la~~~---------------~~~~~~~~~~k~ 230 (536)
T TIGR01512 166 DRFARYYTPVVLAIALAIWLVPGLLKRWPFWVYRALVLLVVASPCALVISAPA---------------AYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHhhcCccccccchHH---------------HHHHHHHHHHHC
Confidence 35677888888777766554332110011112233444445555555544443 888999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPV 161 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~ 161 (473)
||++|+++++|+++++|++|||||||||+|+|+|.+++. .+++.+++++|..+.||+++||++++++.+
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP-------AEVLRLAAAAEQASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH-------HHHHHHHHHHhccCCCcHHHHHHHHHHhcC----
Confidence 999999999999999999999999999999999999865 268899999999999999999999998764
Q ss_pred CCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHH
Q 038599 162 PENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAI 241 (473)
Q Consensus 162 ~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I 241 (473)
.+.++++++++|+++.++|+.+.+|+++++.+.+.. .+.++|.+++++++|+.+.|.+.++|++||+++++|
T Consensus 300 --~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i 371 (536)
T TIGR01512 300 --NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGA------RPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAI 371 (536)
T ss_pred --CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCc------chhhCCCeEEEEEECCEEEEEEEEeccchHHHHHHH
Confidence 355677889999999999999999999888665543 455678899999999999999999999999999999
Q ss_pred HHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEE
Q 038599 242 KDLKSLGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 242 ~~L~~~gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa 319 (473)
++|+++|+ ++.|+|||+..++..+++++|++ .+|++..|++|.++++.++.++ .|+|+|||.||++|+++||+|++
T Consensus 372 ~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia 449 (536)
T TIGR01512 372 AELKALGIEKVVMLTGDRRAVAERVARELGID--EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIA 449 (536)
T ss_pred HHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh--hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEE
Confidence 99999999 99999999999999999999998 8999999999999999999998 89999999999999999999999
Q ss_pred eCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 038599 320 MGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 320 ~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l~v~~ 399 (473)
+|..+++.+++.||+++.++++..++++++++|++++++++|+.|++.||+++++++++|+.+||.+.+.|.++++++++
T Consensus 450 ~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~~~p~~aa~~m~~ss~~v~~ 529 (536)
T TIGR01512 450 MGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFGVLPLWLAVLGHEGSTVLVIL 529 (536)
T ss_pred eCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHcChHHHHHH
Confidence 98567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhhhc
Q 038599 400 NSMLLLK 406 (473)
Q Consensus 400 ns~~l~~ 406 (473)
||+|+.+
T Consensus 530 ns~r~~~ 536 (536)
T TIGR01512 530 NALRLLR 536 (536)
T ss_pred HHHhhcC
Confidence 9999853
No 8
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=3e-60 Score=510.59 Aligned_cols=317 Identities=23% Similarity=0.317 Sum_probs=268.8
Q ss_pred HHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceE
Q 038599 35 AVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFT 114 (473)
Q Consensus 35 ~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~ 114 (473)
+.+++.+...|+.+++..+. +...|+.||+|+|+++|+++++|++|++|++|||||||||+|++.
T Consensus 251 ~~val~V~~IP~aL~~~~~~---------------~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~ 315 (673)
T PRK14010 251 MLIALAVCLIPTTIGGLLSA---------------IGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRM 315 (673)
T ss_pred HHHHHHHHhhhhhHHHHHHH---------------HHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeE
Confidence 33344445556666655544 778999999999999999999999999999999999999999998
Q ss_pred EEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCCCCCccccccccC--CceeEEecCeEEEEccccc
Q 038599 115 VTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPG--EGIFGKIHGNVIYIGNRRI 192 (473)
Q Consensus 115 V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g--~gv~~~v~g~~~~iG~~~~ 192 (473)
+.++.+. ++.+.++++.++...+..+.||+++||++++++.+++.. ....++..+.. ++....++++.+.+|++++
T Consensus 316 ~~~~~~~-~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~~~~~-~~~~~~~pF~~~~k~~gv~~~g~~i~kGa~~~ 393 (673)
T PRK14010 316 ADAFIPV-KSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQHIDLP-QEVGEYIPFTAETRMSGVKFTTREVYKGAPNS 393 (673)
T ss_pred EEEEEeC-CCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcCCCch-hhhcceeccccccceeEEEECCEEEEECCHHH
Confidence 8887765 345667788888888888999999999999988765421 11122222221 1222246788899999988
Q ss_pred cCC----CCCCc----chhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 038599 193 GPR----TGCSK----DSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALY 264 (473)
Q Consensus 193 ~~~----~~~~~----~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~ 264 (473)
+.+ .+... ....+++.++|+|+++++.|++++|++.++|++|||++++|++||++|++++|+||||+.+|.+
T Consensus 394 il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~a 473 (673)
T PRK14010 394 MVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473 (673)
T ss_pred HHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHH
Confidence 732 12111 2234667889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCccc
Q 038599 265 AQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 265 ~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
+|+++||+ .++++++||||.++|+.||++| .|+|+|||+||+|||++|||||||| +|++.++++||+|++++||+.
T Consensus 474 IA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~ 550 (673)
T PRK14010 474 IAKEAGVD--RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTK 550 (673)
T ss_pred HHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHH
Confidence 99999998 8999999999999999999999 8999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 344 IPKAIKLARKASTKLIQNVTLSVTVKGA 371 (473)
Q Consensus 344 l~~~i~~~r~~~~~i~~n~~~~~~~n~~ 371 (473)
+++++++||+++.|+++.+.|++..|+.
T Consensus 551 Iv~av~~gR~i~~n~~~~~~f~~~~~~~ 578 (673)
T PRK14010 551 LMEVVLIGKQLLMTRGSLTTFSIANDIA 578 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeeccHH
Confidence 9999999999999999999999998884
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=5.8e-61 Score=537.27 Aligned_cols=349 Identities=22% Similarity=0.282 Sum_probs=283.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
++.++++++..|+.||...++ +++.|+.+|+|+|+++|+++++|++|++|++|||||||||+|+|
T Consensus 321 ~~aisl~V~~~Pe~Lp~~vt~---------------~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m 385 (903)
T PRK15122 321 LFALAVAVGLTPEMLPMIVSS---------------NLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRI 385 (903)
T ss_pred HHHHHHHHHHccchHHHHHHH---------------HHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeE
Confidence 456677778888888877666 89999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCCHHHHHHHHHh---hhccCCChHHHHHHHHHHHcCCCCCCCCccccccccCCceeEE----e---cCe
Q 038599 114 TVTDFQSICDDVSLGTLLYWVSS---IESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGIFGK----I---HGN 183 (473)
Q Consensus 114 ~V~~i~~~~~~~~~~~ll~~~a~---~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g~gv~~~----v---~g~ 183 (473)
+|.+++..+ +.+.++++.+++. .+..++||++.|++.++...+..........+.++|+.+.+.. + +|+
T Consensus 386 ~V~~~~~~~-~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~ 464 (903)
T PRK15122 386 ILEHHLDVS-GRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQ 464 (903)
T ss_pred EEEEEEcCC-CCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCc
Confidence 999987653 3344566665542 2345789999999999987654321122334445555543322 1 454
Q ss_pred E--EEEccccccCCCCC---------Ccc--------hhHHHHhcCCceeeEeee------------------CCeEEEE
Q 038599 184 V--IYIGNRRIGPRTGC---------SKD--------SIAEAKCTGGKTRGYVYL------------------GATPVGT 226 (473)
Q Consensus 184 ~--~~iG~~~~~~~~~~---------~~~--------~~~~~~~~~G~~vi~va~------------------d~~~lG~ 226 (473)
. +.+|+++.+.+.+. +.+ ...+++.++|+|++++++ |++|+|+
T Consensus 465 ~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGl 544 (903)
T PRK15122 465 HLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGF 544 (903)
T ss_pred EEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEE
Confidence 4 44499875432211 111 124567889999999884 4589999
Q ss_pred EEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------ceehccChh
Q 038599 227 FSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------MVYAELLPQ 283 (473)
Q Consensus 227 i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------~v~a~~~P~ 283 (473)
++|+||+|||++++|++||++|++++|+|||+..+|.++|+++||..+ .+|+|++|+
T Consensus 545 i~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe 624 (903)
T PRK15122 545 LTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPL 624 (903)
T ss_pred EeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHH
Confidence 999999999999999999999999999999999999999999999621 699999999
Q ss_pred hHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHH
Q 038599 284 HKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNV 362 (473)
Q Consensus 284 ~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~ 362 (473)
||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+|+++++||+|++++||+.+++++++||++++|+++++
T Consensus 625 ~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i 703 (903)
T PRK15122 625 QKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYL 703 (903)
T ss_pred HHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 8999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-----Hh------hHHHHHHHHHHHHHHHHHHHH
Q 038599 363 TLSVTVKGAVLVLAV-----AG------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 363 ~~~~~~n~~~~~la~-----~g------~~~~~~a~l~~~~s~l~v~~n 400 (473)
.|.++.|+..++..+ .+ .+.+|+++++|. +++.+...
T Consensus 704 ~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d 751 (903)
T PRK15122 704 NMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWD 751 (903)
T ss_pred HHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCC
Confidence 999999874432221 12 246899999995 67766663
No 10
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.6e-60 Score=530.11 Aligned_cols=381 Identities=18% Similarity=0.200 Sum_probs=296.0
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcc-hhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYH-PLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAAT 80 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak 80 (473)
+++++|+.++++++++++++........ .-.+++.++++++..|+.||...++ +++.|+.+|+|
T Consensus 255 ~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~---------------~la~g~~~mak 319 (867)
T TIGR01524 255 KSVSKLLIRFMLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSS---------------NLAKGAINMSK 319 (867)
T ss_pred HHHHHHHHHHHHHHHHHheehHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHH---------------HHHHHHHHHHh
Confidence 3556677666666555443322111011 1123456667778888888877766 99999999999
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHH---hhhccCCChHHHHHHHHHHHcC
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVS---SIESKSSHPMAAALVDYARSLA 157 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a---~~e~~s~hpi~~Ai~~~a~~~~ 157 (473)
+|+++|+++++|++|++|++|||||||||+|+|+|.+++..+ +.+.++++.+++ ..+..++||++.|+++++....
T Consensus 320 ~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~-~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~ 398 (867)
T TIGR01524 320 KKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS-GETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESA 398 (867)
T ss_pred CCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC-CCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999987542 334566666554 2334467999999999987542
Q ss_pred CCCCCCCcccccccc----CCceeEEecC-----eEEEEccccccCCCCCC-----------------cchhHHHHhcCC
Q 038599 158 IEPVPENVEDFQNFP----GEGIFGKIHG-----NVIYIGNRRIGPRTGCS-----------------KDSIAEAKCTGG 211 (473)
Q Consensus 158 ~~~~~~~v~~~~~~~----g~gv~~~v~g-----~~~~iG~~~~~~~~~~~-----------------~~~~~~~~~~~G 211 (473)
..........+.++| ++++.+.+++ ..+.+|+++.+.+.+.. ..+..++++++|
T Consensus 399 ~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G 478 (867)
T TIGR01524 399 ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQG 478 (867)
T ss_pred hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcC
Confidence 111001112222222 4566665543 24778998776432211 011245678899
Q ss_pred ceeeEeee----------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-
Q 038599 212 KTRGYVYL----------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD- 274 (473)
Q Consensus 212 ~~vi~va~----------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~- 274 (473)
+|++++++ |++|+|+++|+|++|||++++|++||++|++++|+|||+..+|.++|+++||..+
T Consensus 479 ~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~ 558 (867)
T TIGR01524 479 IRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND 558 (867)
T ss_pred CEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC
Confidence 99999886 2489999999999999999999999999999999999999999999999999731
Q ss_pred ----------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccc
Q 038599 275 ----------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMES 331 (473)
Q Consensus 275 ----------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ 331 (473)
.+|+|++|+||.++|+.||++| .|+|+|||+||+|||++|||||+|| +|+++++++
T Consensus 559 v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~a 637 (867)
T TIGR01524 559 FLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEA 637 (867)
T ss_pred eeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHh
Confidence 7999999999999999999999 8999999999999999999999999 999999999
Q ss_pred ccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h------hHHHHHHHHHHHHHHHHHHHH
Q 038599 332 GHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA-----G------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 332 ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~-----g------~~~~~~a~l~~~~s~l~v~~n 400 (473)
||+|++++||+.++.++++||++++|+++|+.|.++.|+..+...++ . .+.+|+++++| ++++.+...
T Consensus 638 ADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~ 716 (867)
T TIGR01524 638 SDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWD 716 (867)
T ss_pred CCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCC
Confidence 99999999999999999999999999999999999888744332222 1 23689999999 677777664
No 11
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.2e-60 Score=530.68 Aligned_cols=380 Identities=19% Similarity=0.238 Sum_probs=293.1
Q ss_pred ccCchhHHHHHHHHHHHHHH-HHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 3 SQKKWPAPSVMASGLLLALS-FLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~-~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
++++++.++++++++++++. ++........+++.++++++..|+.||...++ +++.|+.+|+|+
T Consensus 291 ~i~~~l~~~~~~~~~~v~~i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~---------------~la~g~~~mak~ 355 (902)
T PRK10517 291 RVSWLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTS---------------TLARGAVKLSKQ 355 (902)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHH---------------HHHHHHHHHHhC
Confidence 45556666555555443332 11110001123466777788889999887776 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHh---hhccCCChHHHHHHHHHHHcCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSS---IESKSSHPMAAALVDYARSLAI 158 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~---~e~~s~hpi~~Ai~~~a~~~~~ 158 (473)
|+++|+++++|++|++|++|||||||||+|+|+|.++.... +.+.++++.+++. .+...+||++.|++.+++..+.
T Consensus 356 ~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~-~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~ 434 (902)
T PRK10517 356 KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS-GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESA 434 (902)
T ss_pred CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC-CCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcch
Confidence 99999999999999999999999999999999999976442 3345666665543 2345689999999999875431
Q ss_pred CCCCCCcccccccc----CCceeEEec---C--eEEEEccccccCCCCCC---------c--------chhHHHHhcCCc
Q 038599 159 EPVPENVEDFQNFP----GEGIFGKIH---G--NVIYIGNRRIGPRTGCS---------K--------DSIAEAKCTGGK 212 (473)
Q Consensus 159 ~~~~~~v~~~~~~~----g~gv~~~v~---g--~~~~iG~~~~~~~~~~~---------~--------~~~~~~~~~~G~ 212 (473)
.+.........++| .+++...++ + ..+.+|+++.+.+.+.. . ....+++.++|+
T Consensus 435 ~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~ 514 (902)
T PRK10517 435 RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGL 514 (902)
T ss_pred hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCC
Confidence 11111112222222 344554432 2 34678988765432211 1 111356788999
Q ss_pred eeeEeee----------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--
Q 038599 213 TRGYVYL----------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-- 274 (473)
Q Consensus 213 ~vi~va~----------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-- 274 (473)
|++++++ |++|+|+++|+||+||+++++|++||++|++++|+|||+..+|.++|+++||..+
T Consensus 515 rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~v 594 (902)
T PRK10517 515 RVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEV 594 (902)
T ss_pred EEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCccCc
Confidence 9999884 5689999999999999999999999999999999999999999999999999632
Q ss_pred ---------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccc
Q 038599 275 ---------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESG 332 (473)
Q Consensus 275 ---------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~a 332 (473)
.+|+|++|+||.++|+.||++| .|+|+|||+||+|||++|||||||| +|+|+++++|
T Consensus 595 ~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaA 673 (902)
T PRK10517 595 LIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAA 673 (902)
T ss_pred eeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhC
Confidence 7999999999999999999999 8999999999999999999999999 9999999999
Q ss_pred cEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h------hHHHHHHHHHHHHHHHHHHHH
Q 038599 333 HVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA-----G------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 333 d~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~-----g------~~~~~~a~l~~~~s~l~v~~n 400 (473)
|+|++++||..|++++++||++++|+++++.|.++.|+..++..++ . .+.+|+++++| ++++.+.+.
T Consensus 674 DiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d 751 (902)
T PRK10517 674 DIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFD 751 (902)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCC
Confidence 9999999999999999999999999999999999999844333222 1 23789999999 567766664
No 12
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.6e-58 Score=496.07 Aligned_cols=294 Identities=23% Similarity=0.330 Sum_probs=253.2
Q ss_pred HHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHH
Q 038599 70 LIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAAL 149 (473)
Q Consensus 70 a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai 149 (473)
+...|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++++. ++.+.++++..++..+..+.||.++||
T Consensus 271 i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-~~~~~~~ll~~a~~~s~~s~hP~~~AI 349 (679)
T PRK01122 271 IGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPV-PGVTEEELADAAQLSSLADETPEGRSI 349 (679)
T ss_pred HHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeC-CCCCHHHHHHHHHHhcCCCCCchHHHH
Confidence 5668999999999999999999999999999999999999999999999876 446677888888888999999999999
Q ss_pred HHHHHHc-CCCCCCC--CccccccccC-CceeE-EecCeEEEEcccccc----CCCCCCcc----hhHHHHhcCCceeeE
Q 038599 150 VDYARSL-AIEPVPE--NVEDFQNFPG-EGIFG-KIHGNVIYIGNRRIG----PRTGCSKD----SIAEAKCTGGKTRGY 216 (473)
Q Consensus 150 ~~~a~~~-~~~~~~~--~v~~~~~~~g-~gv~~-~v~g~~~~iG~~~~~----~~~~~~~~----~~~~~~~~~G~~vi~ 216 (473)
++++++. +...... ...++..+++ +++++ .++|+.+.+|+++.+ .+.+...+ +..+++.++|.|+++
T Consensus 350 v~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~ 429 (679)
T PRK01122 350 VVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLV 429 (679)
T ss_pred HHHHHhhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEE
Confidence 9998762 3322110 1122223332 34555 367899999999654 22232222 224667889999999
Q ss_pred eeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 217 VYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 217 va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+++|++++|++.++|++|||++++|++||++|++++|+||||+.+|.++|+++||+ +++++++||||.++|+.+|++|
T Consensus 430 va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~lQ~~G 507 (679)
T PRK01122 430 VAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQEQAEG 507 (679)
T ss_pred EEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999998 8999999999999999999999
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVT 367 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~ 367 (473)
.|+|+|||+||+|||++|||||+|| +|++.++++||+|++++|++.+++++++||++.-+--.--.|++.
T Consensus 508 ~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 508 RLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 8999999999999999999999999 999999999999999999999999999999999665555667765
No 13
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=6.6e-58 Score=491.34 Aligned_cols=345 Identities=35% Similarity=0.514 Sum_probs=304.2
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAV--LIFCAFSKAA 79 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~--a~~~a~~~la 79 (473)
+++++|+.|.+++++++.++.+.. .... .+..++++|||.+.+++ ++..++.+++
T Consensus 203 d~~a~~~~~~v~~~a~~~~~~~~~------~~~~-----------------~~svlvvacPcaL~la~p~a~~~~~~~aa 259 (562)
T TIGR01511 203 DKVAGYFVPVVIAIALITFVIWLF------ALEF-----------------AVTVLIIACPCALGLATPTVIAVATGLAA 259 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHH-----------------HHHHHHHhccchhhhHHHHHHHHHHHHHH
Confidence 456778888877777665543210 1111 22334556666665553 8899999999
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCC
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIE 159 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~ 159 (473)
|+||++|+++++|+++++|++|||||||||+|+|+|.++...+ +.++++++.+++++|..++||+++||++++++.+..
T Consensus 260 ~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~-~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~ 338 (562)
T TIGR01511 260 KNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFG-DRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGIT 338 (562)
T ss_pred HCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCC-CCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999998763 456788999999999999999999999999887765
Q ss_pred CCCCCccccccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHH
Q 038599 160 PVPENVEDFQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALE 239 (473)
Q Consensus 160 ~~~~~v~~~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~ 239 (473)
. ..+.++++++|+|+.+.++|+.+.+|+++++.+.+...+ +..++|.++++++.|++++|++.++|++||++++
T Consensus 339 ~--~~~~~~~~~~g~Gi~~~~~g~~~~iG~~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e 412 (562)
T TIGR01511 339 L--VEVSDFKAIPGIGVEGTVEGTKIQLGNEKLLGENAIKID----GKAEQGSTSVLVAVNGELAGVFALEDQLRPEAKE 412 (562)
T ss_pred c--CCCCCeEEECCceEEEEECCEEEEEECHHHHHhCCCCCC----hhhhCCCEEEEEEECCEEEEEEEecccccHHHHH
Confidence 3 346788899999999999999999999999876655422 2457899999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeE
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgI 318 (473)
+|++||+.|++++|+|||+..++..+++++|++ +++++.|++|.++++.+++++ .|+|+|||.||++|+++||+||
T Consensus 413 ~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 413 VIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGI 489 (562)
T ss_pred HHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEE
Confidence 999999999999999999999999999999995 899999999999999999988 8999999999999999999999
Q ss_pred EeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038599 319 SMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGY 380 (473)
Q Consensus 319 a~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~ 380 (473)
++| .+++.+++.||++++++++..++++++++|++++++++|+.|++.||+++++++++|+
T Consensus 490 a~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~ 550 (562)
T TIGR01511 490 AIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVL 550 (562)
T ss_pred EeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999 7899999999999999999999999999999999999999999999999999998765
No 14
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.1e-58 Score=521.18 Aligned_cols=395 Identities=23% Similarity=0.279 Sum_probs=298.7
Q ss_pred CccCchhHHHHHHHHHHHHHHH-Hhhhcc--------------hh--HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSF-LGYIYH--------------PL--QSLAVAAVIFGLPAILIRSIASIKSLTFNINVL 64 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~-~~~~~~--------------~~--~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~ 64 (473)
+++++++.+++++++++.++.+ +.|++. +. .+...++++++..|+.||...++
T Consensus 279 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti---------- 348 (941)
T TIGR01517 279 SELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI---------- 348 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH----------
Confidence 3456677777766665544332 211110 00 12334555666677777766666
Q ss_pred HHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC-----------HHHHHHH
Q 038599 65 ILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS-----------LGTLLYW 133 (473)
Q Consensus 65 l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~-----------~~~ll~~ 133 (473)
+++.++.+|+|+|+++|+++++|++|++|++|||||||||+|+|+|.+++..++.++ ..+++..
T Consensus 349 -----~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 423 (941)
T TIGR01517 349 -----ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVE 423 (941)
T ss_pred -----HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999875432111 1122222
Q ss_pred HHhhh-------------ccCCChHHHHHHHHHHHcCCCCC-------CCCccccccc-cCCceeEEecCe---EEEEcc
Q 038599 134 VSSIE-------------SKSSHPMAAALVDYARSLAIEPV-------PENVEDFQNF-PGEGIFGKIHGN---VIYIGN 189 (473)
Q Consensus 134 ~a~~e-------------~~s~hpi~~Ai~~~a~~~~~~~~-------~~~v~~~~~~-~g~gv~~~v~g~---~~~iG~ 189 (473)
+.... ...+||++.|++++++..+.+.. .....+|... .+.++....++. .+.+|+
T Consensus 424 ~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA 503 (941)
T TIGR01517 424 GISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGA 503 (941)
T ss_pred HHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECC
Confidence 22211 12368999999999987654320 0112233321 122333333332 466788
Q ss_pred ccccCCCCC--------C---------cchhHHHHhcCCceeeEeee----------------CCeEEEEEEecCccCCc
Q 038599 190 RRIGPRTGC--------S---------KDSIAEAKCTGGKTRGYVYL----------------GATPVGTFSLSDSCRSG 236 (473)
Q Consensus 190 ~~~~~~~~~--------~---------~~~~~~~~~~~G~~vi~va~----------------d~~~lG~i~l~d~lr~~ 236 (473)
++.+...+. . .....++++++|+|++++++ |++|+|+++++|++||+
T Consensus 504 ~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~ 583 (941)
T TIGR01517 504 SEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPG 583 (941)
T ss_pred hHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchh
Confidence 766533221 1 01224678899999998875 44899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------------ceehccChhhHHHHHHH
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------MVYAELLPQHKEELVEL 291 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------~v~a~~~P~~K~~~v~~ 291 (473)
++++|++||++|++++|+|||+..||.++|+++||..+ .+|+|++|+||.++|+.
T Consensus 584 ~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~ 663 (941)
T TIGR01517 584 VREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLM 663 (941)
T ss_pred HHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999732 59999999999999999
Q ss_pred HhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 292 LKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 292 l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
||++| .|+|+|||+||+|||++||||||||.+|++.++++||+++++++|+.+++++++||++++++++|+.|.+.+|+
T Consensus 664 lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~ 743 (941)
T TIGR01517 664 LKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNV 743 (941)
T ss_pred HHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 89999999999999999999999998899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh-----------HHHHHHHHHHHHHHHHHHHH--hHhhhcccccc
Q 038599 371 AVLVLAVAGY-----------PLVWVAVLTDVGTCLVVILN--SMLLLKNNLEE 411 (473)
Q Consensus 371 ~~~~la~~g~-----------~~~~~a~l~~~~s~l~v~~n--s~~l~~~~~~~ 411 (473)
..+++++.|. +.+|++++++.++++.+... .-.+.+.+|++
T Consensus 744 ~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~ 797 (941)
T TIGR01517 744 VAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIG 797 (941)
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCC
Confidence 8877776542 46899999999888888763 23334444443
No 15
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-58 Score=519.27 Aligned_cols=383 Identities=22% Similarity=0.299 Sum_probs=303.0
Q ss_pred ccCchhHHHHHHHHHHHHHHHHhhhcch--hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038599 3 SQKKWPAPSVMASGLLLALSFLGYIYHP--LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAAT 80 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~--~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak 80 (473)
++.+++..+.+++++++++........+ -..+..++++++++|+.||+..++ +++.+..+|+|
T Consensus 267 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti---------------~la~g~~~mak 331 (917)
T COG0474 267 KLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTI---------------ALALGAQRMAK 331 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHH---------------HHHHHHHHHHh
Confidence 4556666666666666555442211111 123567788889999999998888 99999999999
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecC--CCCC------H---HHHHH---HHHhhhcc------
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSIC--DDVS------L---GTLLY---WVSSIESK------ 140 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~--~~~~------~---~~ll~---~~a~~e~~------ 140 (473)
+++++|+++++|+||++|+||+|||||||+|+|+|.+++..+ ++.+ . .+++. +++.....
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999999873 2222 0 01222 12222222
Q ss_pred CCChHHHHHHHHHHHcCC--CCCC-----CCccccccccCCc-eeEEec---C--eEEEEccccccCCCCC------Cc-
Q 038599 141 SSHPMAAALVDYARSLAI--EPVP-----ENVEDFQNFPGEG-IFGKIH---G--NVIYIGNRRIGPRTGC------SK- 200 (473)
Q Consensus 141 s~hpi~~Ai~~~a~~~~~--~~~~-----~~v~~~~~~~g~g-v~~~v~---g--~~~~iG~~~~~~~~~~------~~- 200 (473)
.+||.+.||++++.+.+. .... +.+.+++.-+.+. +...++ + ..+.+|+++.+.+.+. ..
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 679999999999998776 3211 1122333322333 333343 2 3577899988743221 11
Q ss_pred -------chhHHHHhcCCceeeEeee-----------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC
Q 038599 201 -------DSIAEAKCTGGKTRGYVYL-----------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG 256 (473)
Q Consensus 201 -------~~~~~~~~~~G~~vi~va~-----------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG 256 (473)
....++++++|+|++.+++ |++|+|+++++||+|+|++++|+.|+++||+++|+||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 2236788999999988764 5789999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCcc---------------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 257 DSHAAALYAQDQLDHAFD---------------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 257 D~~~~a~~~a~~~gi~~~---------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
|+..||.++|+++|+..+ .||||++|+||.++|+.||+.| .|+|+|||.||+
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDa 651 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDA 651 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhH
Confidence 999999999999997543 6899999999999999999999 899999999999
Q ss_pred HHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------
Q 038599 309 PALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG--------- 379 (473)
Q Consensus 309 ~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g--------- 379 (473)
||||+|||||+||.+|+|+++++||+++.++++..+..++++||+++.|+++.+.+.+..|+..+++.+.+
T Consensus 652 pALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p 731 (917)
T COG0474 652 PALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLP 731 (917)
T ss_pred HHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999998899999999999999999999999999999999999999999999999744433321
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHH
Q 038599 380 ---YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 380 ---~~~~~~a~l~~~~s~l~v~~n 400 (473)
.+.+|++++++.++++.+...
T Consensus 732 ~~~~qll~inll~d~~pa~~L~~~ 755 (917)
T COG0474 732 LTPLQLLWINLLTDSLPALALGVE 755 (917)
T ss_pred HHHHHHHHHHHHHhhhhhheeecC
Confidence 247899999999988888766
No 16
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=4e-56 Score=478.14 Aligned_cols=297 Identities=24% Similarity=0.323 Sum_probs=260.8
Q ss_pred HHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHH
Q 038599 70 LIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAAL 149 (473)
Q Consensus 70 a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai 149 (473)
....|+.||+|+|+++|+++++|++|++|++|||||||||+|+|++.++++. ++.+.++++.+++..+..++||.++|+
T Consensus 272 v~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~-~~~~~~~ll~~aa~~~~~s~hP~a~Ai 350 (675)
T TIGR01497 272 IGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA-QGVDEKTLADAAQLASLADDTPEGKSI 350 (675)
T ss_pred HHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec-CCCcHHHHHHHHHHhcCCCCCcHHHHH
Confidence 4457999999999999999999999999999999999999999999999875 445778889989889999999999999
Q ss_pred HHHHHHcCCCCCC--CCccccccccCC-ceeEE--ecCeEEEEccccccC----CCCCCc----chhHHHHhcCCceeeE
Q 038599 150 VDYARSLAIEPVP--ENVEDFQNFPGE-GIFGK--IHGNVIYIGNRRIGP----RTGCSK----DSIAEAKCTGGKTRGY 216 (473)
Q Consensus 150 ~~~a~~~~~~~~~--~~v~~~~~~~g~-gv~~~--v~g~~~~iG~~~~~~----~~~~~~----~~~~~~~~~~G~~vi~ 216 (473)
+.++++.+..... ....++.+++++ ++++. .+|+.+.+|+++.+. +.+... .+..+++.++|.|+++
T Consensus 351 v~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~ 430 (675)
T TIGR01497 351 VILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLV 430 (675)
T ss_pred HHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEE
Confidence 9999887654321 122345556555 56654 378899999986542 223222 2234677899999999
Q ss_pred eeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 217 VYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 217 va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+++|++++|++.++|++|||++++|++||++|++++|+|||+..+|.++|+++|++ +++++++|+||.++|+.+|++|
T Consensus 431 va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~~~PedK~~~v~~lq~~g 508 (675)
T TIGR01497 431 VCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAEATPEDKIALIRQEQAEG 508 (675)
T ss_pred EEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcCCCHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999998 8999999999999999999998
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
.|+|+|||.||+|||++|||||+|| +|++.++++||++++++|++.+++++++||+++-+......|++.-++
T Consensus 509 ~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~ 582 (675)
T TIGR01497 509 KLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDV 582 (675)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccH
Confidence 8999999999999999999999999 999999999999999999999999999999999998888888876544
No 17
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-57 Score=472.57 Aligned_cols=353 Identities=22% Similarity=0.293 Sum_probs=285.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
-+++++.++.+|++||+..|. +++.|.+||+|++.+||++.++|+||.+++||.|||||||+|+|
T Consensus 284 ~IaVsLAVAAIPEGLPaVvT~---------------tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~M 348 (972)
T KOG0202|consen 284 KIAVSLAVAAIPEGLPAVVTT---------------TLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQM 348 (972)
T ss_pred hHHHHHHHHhccCCCcchhhh---------------hHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccce
Confidence 467788889999999988887 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCC-------------------------------CHHHHHHHH--------Hhhhc-------cCCChHHH
Q 038599 114 TVTDFQSICDDV-------------------------------SLGTLLYWV--------SSIES-------KSSHPMAA 147 (473)
Q Consensus 114 ~V~~i~~~~~~~-------------------------------~~~~ll~~~--------a~~e~-------~s~hpi~~ 147 (473)
.|.+++..+... ..+.+..++ +.++. ..+.|.+.
T Consensus 349 tv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~ 428 (972)
T KOG0202|consen 349 TVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEG 428 (972)
T ss_pred EEEEEEecccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHH
Confidence 999987553211 011121221 12221 15789999
Q ss_pred HHHHHHHHcCCCCCCC-Cc-------------------ccccccc-CCceeEEe---c----CeEEEEccccccCCCCC-
Q 038599 148 ALVDYARSLAIEPVPE-NV-------------------EDFQNFP-GEGIFGKI---H----GNVIYIGNRRIGPRTGC- 198 (473)
Q Consensus 148 Ai~~~a~~~~~~~~~~-~v-------------------~~~~~~~-g~gv~~~v---~----g~~~~iG~~~~~~~~~~- 198 (473)
|+...+++.++..... .. .+++.-. .+.+...+ . ...+.+|+++-+.+.+.
T Consensus 429 AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~ 508 (972)
T KOG0202|consen 429 ALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCST 508 (972)
T ss_pred HHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhc
Confidence 9999999887653110 00 1111111 12222222 1 24566788765433221
Q ss_pred -------C---c--------chhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCccCCc
Q 038599 199 -------S---K--------DSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDSCRSG 236 (473)
Q Consensus 199 -------~---~--------~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~lr~~ 236 (473)
. . .+...++.++|.|++.++. |++|+|++++.||+|++
T Consensus 509 ~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~e 588 (972)
T KOG0202|consen 509 YYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPE 588 (972)
T ss_pred EEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchh
Confidence 1 1 1125677899999999873 67899999999999999
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------------ceehccChhhHHH
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------------MVYAELLPQHKEE 287 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------------~v~a~~~P~~K~~ 287 (473)
++++|+.|+++||+|+|+|||+..||+++|+++|+..+ .+|+|.+|++|.+
T Consensus 589 v~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~k 668 (972)
T KOG0202|consen 589 VADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLK 668 (972)
T ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHH
Confidence 99999999999999999999999999999999999764 7899999999999
Q ss_pred HHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 288 LVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSV 366 (473)
Q Consensus 288 ~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~ 366 (473)
+|+.||+.| .|+|.|||+||+||||.||+|||||.+|+++++++||+|+.||||+.|..++++||+++.|+++++.|.+
T Consensus 669 IVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~l 748 (972)
T KOG0202|consen 669 IVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLL 748 (972)
T ss_pred HHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH----Hhh-------HHHHHHHHHHHHHHHHHHHHh
Q 038599 367 TVKGAVLVLAV----AGY-------PLVWVAVLTDVGTCLVVILNS 401 (473)
Q Consensus 367 ~~n~~~~~la~----~g~-------~~~~~a~l~~~~s~l~v~~ns 401 (473)
..|+..+.+.+ +|+ +.+|+++++|..++-.+-+|.
T Consensus 749 SsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep 794 (972)
T KOG0202|consen 749 SSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEP 794 (972)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCC
Confidence 99996554433 343 489999999999998877774
No 18
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=6e-56 Score=498.43 Aligned_cols=351 Identities=23% Similarity=0.312 Sum_probs=278.3
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
...++++++..|+.||...++ +++.+++||+|+|+++|+++++|+||++|++|||||||||+|+|
T Consensus 276 ~~~v~llv~aiP~~Lp~~vt~---------------~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m 340 (884)
T TIGR01522 276 TISVSLAVAAIPEGLPIIVTV---------------TLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHM 340 (884)
T ss_pred HHHHHHHHHHccchHHHHHHH---------------HHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeE
Confidence 345566677778888877766 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCC---------------------------CHHHHHHHHHhhhc---------cCCChHHHHHHHHHHHcC
Q 038599 114 TVTDFQSICDDV---------------------------SLGTLLYWVSSIES---------KSSHPMAAALVDYARSLA 157 (473)
Q Consensus 114 ~V~~i~~~~~~~---------------------------~~~~ll~~~a~~e~---------~s~hpi~~Ai~~~a~~~~ 157 (473)
+|.+++..++.. ...+++..++.... ..+||++.|++++++..+
T Consensus 341 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~ 420 (884)
T TIGR01522 341 TVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFG 420 (884)
T ss_pred EEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcC
Confidence 999987543210 01233333322111 125699999999998766
Q ss_pred CCCCCCCccccccccCC---ceeE---Ee--cC--eEEEEccccccCCCC--------CC--c--------chhHHHHhc
Q 038599 158 IEPVPENVEDFQNFPGE---GIFG---KI--HG--NVIYIGNRRIGPRTG--------CS--K--------DSIAEAKCT 209 (473)
Q Consensus 158 ~~~~~~~v~~~~~~~g~---gv~~---~v--~g--~~~~iG~~~~~~~~~--------~~--~--------~~~~~~~~~ 209 (473)
++........+.++|.. ...+ .. ++ ..+.+|+++.+...+ .. . ....+++++
T Consensus 421 ~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~ 500 (884)
T TIGR01522 421 LDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMAS 500 (884)
T ss_pred cHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHh
Confidence 53211112223333322 1211 11 33 245568876543221 10 1 112456788
Q ss_pred CCceeeEeeeCC-----eEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc----------
Q 038599 210 GGKTRGYVYLGA-----TPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---------- 274 (473)
Q Consensus 210 ~G~~vi~va~d~-----~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---------- 274 (473)
+|+|+++++++. +|+|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++||...
T Consensus 501 ~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l 580 (884)
T TIGR01522 501 AGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL 580 (884)
T ss_pred cCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHh
Confidence 999999998754 89999999999999999999999999999999999999999999999999732
Q ss_pred ---------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEec
Q 038599 275 ---------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMS 338 (473)
Q Consensus 275 ---------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~ 338 (473)
.+|+|++|+||.++|+.||+.| .|+|+|||.||+|||++|||||+||.++++.++++||+++++
T Consensus 581 ~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred HhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcC
Confidence 4999999999999999999999 999999999999999999999999867899999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-------hHHHHHHHHHHHHHHHHHHH
Q 038599 339 NDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA----G-------YPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 339 ~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~----g-------~~~~~~a~l~~~~s~l~v~~ 399 (473)
+|++.+++++++||++++++++|+.|.++.|+..+.+.++ + ++.+|++++++.++++.+..
T Consensus 661 d~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~ 732 (884)
T TIGR01522 661 DDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGV 732 (884)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhcc
Confidence 9999999999999999999999999999999977655432 2 24689999999998877766
No 19
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.1e-54 Score=492.10 Aligned_cols=352 Identities=21% Similarity=0.254 Sum_probs=279.5
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
++.++++++.+|++||+..++ +++.+++||++++++||+++++|+||++++||+|||||||+|+|
T Consensus 311 ~~av~l~Va~VPegLp~~vti---------------~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M 375 (1053)
T TIGR01523 311 IYAICLAISIIPESLIAVLSI---------------TMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKM 375 (1053)
T ss_pred HHHHHHHHHHcccchHHHHHH---------------HHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceE
Confidence 456778889999999988887 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCC----------CC---------------------------------------C---------HHHHHHHHH
Q 038599 114 TVTDFQSICD----------DV---------------------------------------S---------LGTLLYWVS 135 (473)
Q Consensus 114 ~V~~i~~~~~----------~~---------------------------------------~---------~~~ll~~~a 135 (473)
+|.+++..+. ++ + ..+++..++
T Consensus 376 ~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 455 (1053)
T TIGR01523 376 IARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAA 455 (1053)
T ss_pred EEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 9999864210 00 0 011222222
Q ss_pred hh-----h--------ccCCChHHHHHHHHHHHcCCCCC------------------------------CCCcccccccc
Q 038599 136 SI-----E--------SKSSHPMAAALVDYARSLAIEPV------------------------------PENVEDFQNFP 172 (473)
Q Consensus 136 ~~-----e--------~~s~hpi~~Ai~~~a~~~~~~~~------------------------------~~~v~~~~~~~ 172 (473)
.. + ...++|++.|++.++...+++.. .+.+..++.-+
T Consensus 456 lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 456 LANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred hccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCC
Confidence 11 0 12369999999999987665310 00111122222
Q ss_pred CCceeE-Eec---Ce---EEEEccccccCCCCCC-----------c--------chhHHHHhcCCceeeEeee-------
Q 038599 173 GEGIFG-KIH---GN---VIYIGNRRIGPRTGCS-----------K--------DSIAEAKCTGGKTRGYVYL------- 219 (473)
Q Consensus 173 g~gv~~-~v~---g~---~~~iG~~~~~~~~~~~-----------~--------~~~~~~~~~~G~~vi~va~------- 219 (473)
.+...+ .++ +. .+.+|+++.+.+.+.. . ....++++++|+|++.+++
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~ 615 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKAD 615 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchh
Confidence 223222 221 22 3568999877543311 1 1125678999999998763
Q ss_pred ------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------
Q 038599 220 ------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------- 274 (473)
Q Consensus 220 ------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------- 274 (473)
|++|+|+++++|++|++++++|++||++|++++|+|||+..||.++|+++||..+
T Consensus 616 ~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~ 695 (1053)
T TIGR01523 616 NNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRD 695 (1053)
T ss_pred ccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccccccc
Confidence 4579999999999999999999999999999999999999999999999999532
Q ss_pred ----------------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCC
Q 038599 275 ----------------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGS 325 (473)
Q Consensus 275 ----------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~ 325 (473)
.+|+|++|+||.++|+.||++| .|+|+|||.||+|||++|||||+||.+|+
T Consensus 696 ~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt 775 (1053)
T TIGR01523 696 EIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGS 775 (1053)
T ss_pred ccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCcc
Confidence 3899999999999999999999 89999999999999999999999998899
Q ss_pred ccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H----h--------hHHHHHHHHH
Q 038599 326 ALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAV----A----G--------YPLVWVAVLT 389 (473)
Q Consensus 326 ~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~----~----g--------~~~~~~a~l~ 389 (473)
+.++++||+++++++|+.+..++++||++++++++++.|.+..|+..+++.+ + | ++.+|+++++
T Consensus 776 ~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~ 855 (1053)
T TIGR01523 776 DVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMIT 855 (1053)
T ss_pred HHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999995444332 2 2 2358999999
Q ss_pred HHHHHHHHHHH
Q 038599 390 DVGTCLVVILN 400 (473)
Q Consensus 390 ~~~s~l~v~~n 400 (473)
+.++++.+.+.
T Consensus 856 d~~palaL~~e 866 (1053)
T TIGR01523 856 SCFPAMGLGLE 866 (1053)
T ss_pred HHHHHHhhccC
Confidence 99998887763
No 20
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-56 Score=466.33 Aligned_cols=346 Identities=24% Similarity=0.331 Sum_probs=284.1
Q ss_pred HHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEE
Q 038599 39 VIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDF 118 (473)
Q Consensus 39 v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i 118 (473)
+++..+|++||..+|+ +++.+++||.+.+.|+|+++++|+||+.++||.|||||||.|+|+|.+.
T Consensus 392 ilVVAVPEGLPLAVTL---------------sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~ 456 (1034)
T KOG0204|consen 392 ILVVAVPEGLPLAVTL---------------SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQS 456 (1034)
T ss_pred EEEEECCCCccHHHHH---------------HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEee
Confidence 3455679999988887 9999999999999999999999999999999999999999999999998
Q ss_pred EecCCCCCH---------HHHHHHH-Hh-----------------hhccCCChHHHHHHHHHHHcCCCCCCCC-------
Q 038599 119 QSICDDVSL---------GTLLYWV-SS-----------------IESKSSHPMAAALVDYARSLAIEPVPEN------- 164 (473)
Q Consensus 119 ~~~~~~~~~---------~~ll~~~-a~-----------------~e~~s~hpi~~Ai~~~a~~~~~~~~~~~------- 164 (473)
+..++.+.. ..+..+. .. .....++|.++||+.+....|.+.+..+
T Consensus 457 ~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~k 536 (1034)
T KOG0204|consen 457 YIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVK 536 (1034)
T ss_pred eeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeE
Confidence 765433221 1111111 11 1233579999999999988876642221
Q ss_pred ccccccccC-CceeEEe-cCe--EEEEccccccCCCCCC------------------cchhHHHHhcCCceeeEeee---
Q 038599 165 VEDFQNFPG-EGIFGKI-HGN--VIYIGNRRIGPRTGCS------------------KDSIAEAKCTGGKTRGYVYL--- 219 (473)
Q Consensus 165 v~~~~~~~g-~gv~~~v-~g~--~~~iG~~~~~~~~~~~------------------~~~~~~~~~~~G~~vi~va~--- 219 (473)
+..|.+... .|+.... ++. .+.+|+.+.+...+.. ....++.++.+|.|.+++++
T Consensus 537 v~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df 616 (1034)
T KOG0204|consen 537 VYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDF 616 (1034)
T ss_pred EeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeecc
Confidence 222222211 1222221 222 4566776654322211 12236888999999998875
Q ss_pred ------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------
Q 038599 220 ------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------- 274 (473)
Q Consensus 220 ------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------- 274 (473)
|++++|+++++||+|||++++|+.|+++|+.|.|+||||..||+++|.+|||..+
T Consensus 617 ~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~l 696 (1034)
T KOG0204|consen 617 VAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLAL 696 (1034)
T ss_pred ccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCcccee
Confidence 3479999999999999999999999999999999999999999999999999764
Q ss_pred --------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc
Q 038599 275 --------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH 333 (473)
Q Consensus 275 --------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad 333 (473)
.|.||.+|.||.-+|+.|++.| .|+..|||+||+|||++||||.|||..|+++|+|++|
T Consensus 697 EG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSD 776 (1034)
T KOG0204|consen 697 EGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASD 776 (1034)
T ss_pred cchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCC
Confidence 7899999999999999999999 8999999999999999999999999999999999999
Q ss_pred EEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHHH
Q 038599 334 VILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAG-----------YPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 334 ~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g-----------~~~~~~a~l~~~~s~l~v~~ 399 (473)
++++||||+.+..+++|||..+.+|+++++|.++.|++++.+++.+ .+.+|+|++||.+.+|++..
T Consensus 777 IIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALAT 853 (1034)
T KOG0204|consen 777 IIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALAT 853 (1034)
T ss_pred eEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999998888765 36899999999999998876
No 21
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.1e-53 Score=484.41 Aligned_cols=382 Identities=19% Similarity=0.183 Sum_probs=289.7
Q ss_pred ccCchhHHHHHHHHHHHHHHHHhhhcchh-HHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 3 SQKKWPAPSVMASGLLLALSFLGYIYHPL-QSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~-~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
++.+++.++++++++++++......+... .+.++++++++..|+.||...++ +++.++.+|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i---------------~l~~~~~~m~~~ 328 (997)
T TIGR01106 264 HFIHIITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTV---------------CLTLTAKRMARK 328 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHH---------------HHHHHHHHHHHC
Confidence 44556666666555554443221111111 22345566666778888877666 899999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCC-------------CC-----HHHHHHHHHhhh-----
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDD-------------VS-----LGTLLYWVSSIE----- 138 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~-------------~~-----~~~ll~~~a~~e----- 138 (473)
|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.. .+ .+.++..++...
T Consensus 329 ~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~ 408 (997)
T TIGR01106 329 NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFK 408 (997)
T ss_pred CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeec
Confidence 9999999999999999999999999999999999998743210 01 013443333221
Q ss_pred -----------ccCCChHHHHHHHHHHHcCCCC-----CCCCccccccccCCceeEE-e---c--C---eEEEEcccccc
Q 038599 139 -----------SKSSHPMAAALVDYARSLAIEP-----VPENVEDFQNFPGEGIFGK-I---H--G---NVIYIGNRRIG 193 (473)
Q Consensus 139 -----------~~s~hpi~~Ai~~~a~~~~~~~-----~~~~v~~~~~~~g~gv~~~-v---~--g---~~~~iG~~~~~ 193 (473)
...++|++.|+++++...+.+. ....+..++..+.+..... + + + ..+.+|+++.+
T Consensus 409 ~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~I 488 (997)
T TIGR01106 409 AGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERI 488 (997)
T ss_pred cccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHH
Confidence 1136899999999987543221 1112222222223332222 2 1 1 23678999876
Q ss_pred CCCCCC---------c--------chhHHHHhcCCceeeEeee------------------------CCeEEEEEEecCc
Q 038599 194 PRTGCS---------K--------DSIAEAKCTGGKTRGYVYL------------------------GATPVGTFSLSDS 232 (473)
Q Consensus 194 ~~~~~~---------~--------~~~~~~~~~~G~~vi~va~------------------------d~~~lG~i~l~d~ 232 (473)
.+.+.. . ....++++++|+|++.+++ |++|+|+++++||
T Consensus 489 l~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dp 568 (997)
T TIGR01106 489 LERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDP 568 (997)
T ss_pred HHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCC
Confidence 443210 0 1124668899999987762 4579999999999
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------------------------
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------------------- 274 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------------------- 274 (473)
+|++++++|++|+++|++++|+|||+..+|.++++++|+..+
T Consensus 569 lr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~ 648 (997)
T TIGR01106 569 PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648 (997)
T ss_pred ChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCC
Confidence 999999999999999999999999999999999999999421
Q ss_pred -------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC
Q 038599 275 -------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND 340 (473)
Q Consensus 275 -------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~ 340 (473)
.||+|++|+||.++|+.||+.| .|+|+|||.||+|||++|||||+||.+|++.++++||+++++++
T Consensus 649 ~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~ 728 (997)
T TIGR01106 649 SEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDN 728 (997)
T ss_pred HHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCC
Confidence 2999999999999999999999 89999999999999999999999997899999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----h-------hHHHHHHHHHHHHHHHHHHH
Q 038599 341 IRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA----G-------YPLVWVAVLTDVGTCLVVIL 399 (473)
Q Consensus 341 l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~----g-------~~~~~~a~l~~~~s~l~v~~ 399 (473)
|+.+++++++||+++.|+++++.|.+..|+..++..+. + ++.+|++++++.++++.+..
T Consensus 729 f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~ 798 (997)
T TIGR01106 729 FASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAY 798 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999865444332 2 24689999999999988877
No 22
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4.9e-53 Score=449.58 Aligned_cols=341 Identities=26% Similarity=0.332 Sum_probs=280.9
Q ss_pred chhHHHHHHHHHHHHHHHHhhhcch----hHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHC
Q 038599 6 KWPAPSVMASGLLLALSFLGYIYHP----LQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATT 81 (473)
Q Consensus 6 ~~~~~~~i~~~i~~~~~~~~~~~~~----~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~ 81 (473)
.|+.++++++++++++.+..+.+.+ ..+...+++++...|..++...++ ++..+..+|+++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~---------------~~~~~~~~~~~~ 214 (499)
T TIGR01494 150 IIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTI---------------ALAVGDARLAKK 214 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHH---------------HHHHHHHHHHHC
Confidence 5666666666666555443322221 111233344444445555544433 888999999999
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPV 161 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~ 161 (473)
|+++|+++++|++|++|++|||||||||+|+|+|.+++..+. +..++||+++|++++++....
T Consensus 215 gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------~~~s~hp~~~ai~~~~~~~~~--- 277 (499)
T TIGR01494 215 GIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------EYLSGHPDERALVKSAKWKIL--- 277 (499)
T ss_pred CcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC--------------CcCCCChHHHHHHHHhhhcCc---
Confidence 999999999999999999999999999999999999986532 467899999999999975432
Q ss_pred CCCccccccccCCceeEEecC--eEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHH
Q 038599 162 PENVEDFQNFPGEGIFGKIHG--NVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALE 239 (473)
Q Consensus 162 ~~~v~~~~~~~g~gv~~~v~g--~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~ 239 (473)
...+|...+ +|+.+.+++ +.+.+|+++++.+.+....+..+++.++|+++++++++.+++|++.++|++|+++++
T Consensus 278 --~~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~g~i~l~d~lr~~~~~ 354 (499)
T TIGR01494 278 --NVFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKDLEEKVKELAQSGLRVLAVASKETLLGLLGLEDPLRDDAKE 354 (499)
T ss_pred --ceeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHHHHHHHHHHHhCCCEEEEEEECCeEEEEEEecCCCchhHHH
Confidence 345667676 788887764 678999999886654332333456778999999999999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeE
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgI 318 (473)
+|++|+++|++++|+|||+..++..+|+++|+ +++++|++|.++|+.+|+.| .|+|+|||.||+||+++|||||
T Consensus 355 ~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgi 429 (499)
T TIGR01494 355 TISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGI 429 (499)
T ss_pred HHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcc
Confidence 99999999999999999999999999999997 79999999999999999999 8999999999999999999999
Q ss_pred EeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 038599 319 SMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGYPLVWVAVLTDVGTCL 395 (473)
Q Consensus 319 a~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~~~~~~a~l~~~~s~l 395 (473)
+++ ++++||++++++++..++.++++||++++++++|+.|++.||++.+++++.++. .+.+++..+++
T Consensus 430 a~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~---~~~~~~~~~~~ 497 (499)
T TIGR01494 430 AMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV---LNLVPPGLAAL 497 (499)
T ss_pred ccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcchhhh
Confidence 996 688999999999999999999999999999999999999999999999987653 55555554443
No 23
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=3.8e-53 Score=482.79 Aligned_cols=349 Identities=19% Similarity=0.216 Sum_probs=272.0
Q ss_pred HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCce
Q 038599 34 LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEF 113 (473)
Q Consensus 34 ~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~ 113 (473)
+..+.++++..|+.||+..++ +++.|+.||+|+||+||++.++|.+|++|++|||||||||+|+|
T Consensus 400 l~~l~iiv~~vP~~LP~~~ti---------------~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m 464 (1054)
T TIGR01657 400 LRSLDIITIVVPPALPAELSI---------------GINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGL 464 (1054)
T ss_pred HHHHHHHHhhcCchHHHHHHH---------------HHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCe
Confidence 445666777888899988777 99999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCCCC------------HHHHHHHHHhhh-------ccCCChHHHHHHHHHHHcCCC-CC------------
Q 038599 114 TVTDFQSICDDVS------------LGTLLYWVSSIE-------SKSSHPMAAALVDYARSLAIE-PV------------ 161 (473)
Q Consensus 114 ~V~~i~~~~~~~~------------~~~ll~~~a~~e-------~~s~hpi~~Ai~~~a~~~~~~-~~------------ 161 (473)
+|.+++..++... ...++...+... ...+||++.|++++....... ..
T Consensus 465 ~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~ 544 (1054)
T TIGR01657 465 DLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVR 544 (1054)
T ss_pred eEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCccccccccccee
Confidence 9999986543111 111222222211 235899999999986321100 00
Q ss_pred ----CCC---ccccccccCC-ceeEEe--c--Ce--EEEEccccccCCCCCC------cchhHHHHhcCCceeeEeee--
Q 038599 162 ----PEN---VEDFQNFPGE-GIFGKI--H--GN--VIYIGNRRIGPRTGCS------KDSIAEAKCTGGKTRGYVYL-- 219 (473)
Q Consensus 162 ----~~~---v~~~~~~~g~-gv~~~v--~--g~--~~~iG~~~~~~~~~~~------~~~~~~~~~~~G~~vi~va~-- 219 (473)
... +..|+.-+.. .++..+ + ++ .+.+|+|+.+.+.+.. ..+..++++++|+|++++++
T Consensus 545 ~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~~G~RVLalA~k~ 624 (1054)
T TIGR01657 545 TDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKE 624 (1054)
T ss_pred ccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHhcCCEEEEEEEee
Confidence 000 1111111112 223222 1 22 5788999988765431 23346789999999999873
Q ss_pred -------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------
Q 038599 220 -------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------ 274 (473)
Q Consensus 220 -------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------ 274 (473)
|++|+|+++|+|++||+++++|++||++|++++|+|||+..||.++|+++||..+
T Consensus 625 l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~ 704 (1054)
T TIGR01657 625 LPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLIL 704 (1054)
T ss_pred cCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEE
Confidence 4689999999999999999999999999999999999999999999999999310
Q ss_pred ---------------------------------------------------------------------------ceehc
Q 038599 275 ---------------------------------------------------------------------------MVYAE 279 (473)
Q Consensus 275 ---------------------------------------------------------------------------~v~a~ 279 (473)
.||||
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR 784 (1054)
T TIGR01657 705 AEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFAR 784 (1054)
T ss_pred eecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEe
Confidence 48999
Q ss_pred cChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHH
Q 038599 280 LLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKL 358 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i 358 (473)
++|+||.++|+.||+.| .|+|+|||.||+||||+|||||||| ..+ +..+||+++.+++++.++.++++||+++.++
T Consensus 785 ~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~--~~d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~ 861 (1054)
T TIGR01657 785 MAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS--EAE-ASVAAPFTSKLASISCVPNVIREGRCALVTS 861 (1054)
T ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec--ccc-ceeecccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999999997 334 4488999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH----h-----hHHHHHHHHHHHHHHHHHHHH
Q 038599 359 IQNVTLSVTVKGAVLVLAVA----G-----YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 359 ~~n~~~~~~~n~~~~~la~~----g-----~~~~~~a~l~~~~s~l~v~~n 400 (473)
++.+.|.+.|+++.+...+. | ++.+|++++++...++.+...
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~ 912 (1054)
T TIGR01657 862 FQMFKYMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRN 912 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999865443322 2 356899998887776665543
No 24
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=8e-52 Score=466.20 Aligned_cols=348 Identities=22% Similarity=0.296 Sum_probs=276.2
Q ss_pred HHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEE
Q 038599 36 VAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTV 115 (473)
Q Consensus 36 ~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V 115 (473)
.++++++..|+.||...++ +++.++++|+++|+++|+++++|+||++|++|||||||||+|+|+|
T Consensus 243 ~i~l~v~~iP~~Lp~~vti---------------~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v 307 (917)
T TIGR01116 243 AVALAVAAIPEGLPAVITT---------------CLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSV 307 (917)
T ss_pred HHhhhhhccccccHHHHHH---------------HHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEE
Confidence 4456677788888877776 9999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCC-------------CC-------------------HHHHHHHHHhhhc--------------cCCChHHHHH
Q 038599 116 TDFQSICDD-------------VS-------------------LGTLLYWVSSIES--------------KSSHPMAAAL 149 (473)
Q Consensus 116 ~~i~~~~~~-------------~~-------------------~~~ll~~~a~~e~--------------~s~hpi~~Ai 149 (473)
.+++..++. ++ .++++..+ ++.+ ..++|.+.|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~lc~~~~~~~~~~~~~~~~~gdp~E~AL 386 (917)
T TIGR01116 308 CKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIA-ALCNDSSLDFNERKGVYEKVGEATEAAL 386 (917)
T ss_pred EEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHH-HhcCCCeeeccccCCceeeccChhHHHH
Confidence 998754310 00 11122222 2111 1369999999
Q ss_pred HHHHHHcCCCCCCC---------------------CccccccccC-CceeEEec--C--eEEEEccccccCCCCCC----
Q 038599 150 VDYARSLAIEPVPE---------------------NVEDFQNFPG-EGIFGKIH--G--NVIYIGNRRIGPRTGCS---- 199 (473)
Q Consensus 150 ~~~a~~~~~~~~~~---------------------~v~~~~~~~g-~gv~~~v~--g--~~~~iG~~~~~~~~~~~---- 199 (473)
+.++++.+++.... .+..++.-+. +.+...++ + ..+.+|+++.+.+.+..
T Consensus 387 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~ 466 (917)
T TIGR01116 387 KVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG 466 (917)
T ss_pred HHHHHHcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC
Confidence 99988766542100 1111111112 22333332 2 34667999876543311
Q ss_pred ------cc--------hhHHHHhc-CCceeeEeee-----------------------CCeEEEEEEecCccCCchHHHH
Q 038599 200 ------KD--------SIAEAKCT-GGKTRGYVYL-----------------------GATPVGTFSLSDSCRSGALEAI 241 (473)
Q Consensus 200 ------~~--------~~~~~~~~-~G~~vi~va~-----------------------d~~~lG~i~l~d~lr~~a~~~I 241 (473)
.+ +..+++++ +|+|++.+++ |.+|+|+++++||+|++++++|
T Consensus 467 ~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I 546 (917)
T TIGR01116 467 DGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAI 546 (917)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHH
Confidence 11 12567788 9999998862 4589999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------------------ceehccChhhHHHHHHHH
Q 038599 242 KDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------------------------MVYAELLPQHKEELVELL 292 (473)
Q Consensus 242 ~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------------------------~v~a~~~P~~K~~~v~~l 292 (473)
++||++|++++|+|||+..+|.++|+++|+..+ .+++|++|+||.++|+.+
T Consensus 547 ~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l 626 (917)
T TIGR01116 547 EKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELL 626 (917)
T ss_pred HHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHH
Confidence 999999999999999999999999999999641 489999999999999999
Q ss_pred hhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 293 KKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGA 371 (473)
Q Consensus 293 ~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~ 371 (473)
|+.| .|+|+|||.||+|||++|||||+|| +|++.++++||+++.+++|..+.+++++||++++++++++.|.+..|+.
T Consensus 627 q~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~ 705 (917)
T TIGR01116 627 QEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIG 705 (917)
T ss_pred HhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 9998 8999999999999999999999999 8999999999999999999999999999999999999999999999996
Q ss_pred HHHHHHH----h-------hHHHHHHHHHHHHHHHHHHHH
Q 038599 372 VLVLAVA----G-------YPLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 372 ~~~la~~----g-------~~~~~~a~l~~~~s~l~v~~n 400 (473)
.+++.+. | ++.+|++++++.++++.+.+.
T Consensus 706 ~~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~ 745 (917)
T TIGR01116 706 EVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFN 745 (917)
T ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 5444332 3 246899999999998887663
No 25
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-45 Score=388.16 Aligned_cols=321 Identities=20% Similarity=0.249 Sum_probs=248.6
Q ss_pred HHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEE
Q 038599 40 IFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQ 119 (473)
Q Consensus 40 ~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~ 119 (473)
+....|+.||+..++ +...|.+||.|+||+|.+|+++...|++|++|||||||||++.+++.++.
T Consensus 426 iTi~VPPALPAaltv---------------G~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 426 ITIVVPPALPAALTV---------------GIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred EEEecCCCchhhhhH---------------HHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 444567788888877 99999999999999999999999999999999999999999999999998
Q ss_pred ecCCCCCHHH----HH--------------------HHHH------hhh----ccCCChHHHHHHHHHHHc---------
Q 038599 120 SICDDVSLGT----LL--------------------YWVS------SIE----SKSSHPMAAALVDYARSL--------- 156 (473)
Q Consensus 120 ~~~~~~~~~~----ll--------------------~~~a------~~e----~~s~hpi~~Ai~~~a~~~--------- 156 (473)
+.++..+... .. .+.+ ++. .-.++|++..+++....-
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~ 570 (1140)
T KOG0208|consen 491 PVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDE 570 (1140)
T ss_pred eccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccch
Confidence 7654321110 00 0111 111 113466666655542110
Q ss_pred ------CCCCCCCCccc--cccc--cCC----------------ceeEEe--cC----eEEEEccccccCCCCCC-----
Q 038599 157 ------AIEPVPENVED--FQNF--PGE----------------GIFGKI--HG----NVIYIGNRRIGPRTGCS----- 199 (473)
Q Consensus 157 ------~~~~~~~~v~~--~~~~--~g~----------------gv~~~v--~g----~~~~iG~~~~~~~~~~~----- 199 (473)
...|...++.+ +... .+. .++..+ .+ ..+.+|+||++.+.+.+
T Consensus 571 ~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~ 650 (1140)
T KOG0208|consen 571 ATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPA 650 (1140)
T ss_pred hhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCc
Confidence 00000000000 0000 011 122222 11 35778999988665443
Q ss_pred -cchhHHHHhcCCceeeEeee---------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCC
Q 038599 200 -KDSIAEAKCTGGKTRGYVYL---------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGD 257 (473)
Q Consensus 200 -~~~~~~~~~~~G~~vi~va~---------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD 257 (473)
+.+.+++|+.+|+|++++|. |++|+|++.|++++|++++.+|++|++++||++|+|||
T Consensus 651 dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGD 730 (1140)
T KOG0208|consen 651 DYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGD 730 (1140)
T ss_pred cHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCC
Confidence 34558999999999999973 67999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCcc---------------------------------------------------------------
Q 038599 258 SHAAALYAQDQLDHAFD--------------------------------------------------------------- 274 (473)
Q Consensus 258 ~~~~a~~~a~~~gi~~~--------------------------------------------------------------- 274 (473)
|..||..+||++||..+
T Consensus 731 NllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~ 810 (1140)
T KOG0208|consen 731 NLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGK 810 (1140)
T ss_pred chheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCc
Confidence 99999999999999764
Q ss_pred --------------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc
Q 038599 275 --------------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH 333 (473)
Q Consensus 275 --------------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad 333 (473)
.|||||+|+||.++|+.||+.| .|+|||||.||+.|||+|||||+++ ...|.-+|.
T Consensus 811 ~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLS---eaEASvAAp 887 (1140)
T KOG0208|consen 811 TFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLS---EAEASVAAP 887 (1140)
T ss_pred hhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchh---hhhHhhcCc
Confidence 7999999999999999999999 9999999999999999999999994 233566799
Q ss_pred EEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 334 VILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVA 378 (473)
Q Consensus 334 ~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~ 378 (473)
+...-.++++++++|++||+++-+....+++..+|.++.+...++
T Consensus 888 FTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~ 932 (1140)
T KOG0208|consen 888 FTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF 932 (1140)
T ss_pred cccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe
Confidence 998878999999999999999999999999999999887766554
No 26
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-46 Score=393.67 Aligned_cols=392 Identities=20% Similarity=0.221 Sum_probs=292.5
Q ss_pred CccCchhHHHHHHHHHHHHHHHHhhhcchhHH-HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 038599 2 KSQKKWPAPSVMASGLLLALSFLGYIYHPLQS-LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAAT 80 (473)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~-~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak 80 (473)
+++.+++....+.+++.+|+..+...|..+.. .+.++++++..|++|++..|+ .+..-.+||++
T Consensus 285 ~~fi~~it~vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv---------------~LtltakrMa~ 349 (1019)
T KOG0203|consen 285 EHFIHIITGVAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTV---------------CLTLTAKRMAR 349 (1019)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehh---------------hHHHHHHHHhh
Confidence 46677888888888888875544323333321 335667788899999998888 88899999999
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCC------------------HHHHHHHHHhhh----
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVS------------------LGTLLYWVSSIE---- 138 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~------------------~~~ll~~~a~~e---- 138 (473)
+++++|++++.|++|...++|.|||||||+|+|+|.+++..+.-.+ -.++...+ .+.
T Consensus 350 Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~-~lCn~a~ 428 (1019)
T KOG0203|consen 350 KNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIA-TLCNRAV 428 (1019)
T ss_pred ceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHH-HHhCcce
Confidence 9999999999999999999999999999999999999876532100 01122211 111
Q ss_pred -------------ccCCChHHHHHHHHHHHcCCCC-----CCCCccccccccCCceeEEe----c-----CeEEEEcccc
Q 038599 139 -------------SKSSHPMAAALVDYARSLAIEP-----VPENVEDFQNFPGEGIFGKI----H-----GNVIYIGNRR 191 (473)
Q Consensus 139 -------------~~s~hpi~~Ai~~~a~~~~~~~-----~~~~v~~~~~~~g~gv~~~v----~-----g~~~~iG~~~ 191 (473)
.-.+++.+.|++.++..-.... ....+.+.....-+.....+ + --.+.+|+++
T Consensus 429 ~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape 508 (1019)
T KOG0203|consen 429 FKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPE 508 (1019)
T ss_pred ecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChH
Confidence 1246899999999975432110 00111111111111111111 1 1235568887
Q ss_pred ccCCCCCCc---------chh--------HHHHhcCCceeeEee------------------------eCCeEEEEEEec
Q 038599 192 IGPRTGCSK---------DSI--------AEAKCTGGKTRGYVY------------------------LGATPVGTFSLS 230 (473)
Q Consensus 192 ~~~~~~~~~---------~~~--------~~~~~~~G~~vi~va------------------------~d~~~lG~i~l~ 230 (473)
.+.+.+... +.. ..++...|.||+.++ .+..|+|++.+.
T Consensus 509 ~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~i 588 (1019)
T KOG0203|consen 509 RILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMI 588 (1019)
T ss_pred HHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhcc
Confidence 664433221 111 233344444555432 356899999999
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------------------
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------------------ 274 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------------------ 274 (473)
||+|..+++++..||++|++++|+|||++.||.++|+++||..+
T Consensus 589 dPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~ 668 (1019)
T KOG0203|consen 589 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPD 668 (1019)
T ss_pred CCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccc
Confidence 99999999999999999999999999999999999999997653
Q ss_pred ---------------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEec
Q 038599 275 ---------------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMS 338 (473)
Q Consensus 275 ---------------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~ 338 (473)
.||||.+|+||.-||+..|+.| .|+..|||.||+||||.||||||||..|+|+++.+||++++|
T Consensus 669 ~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLD 748 (1019)
T KOG0203|consen 669 MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLD 748 (1019)
T ss_pred cCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEec
Confidence 6899999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhhH-------HHHHHHHHHHHHHHHHHHH---hHhh
Q 038599 339 NDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAV----LVLAVAGYP-------LVWVAVLTDVGTCLVVILN---SMLL 404 (473)
Q Consensus 339 ~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~----~~la~~g~~-------~~~~a~l~~~~s~l~v~~n---s~~l 404 (473)
+||.+|+.-+++||-++.|.|+.+.|.++.|+-- +++-++|+| .+.+.+.+|..+++.+... |-.+
T Consensus 749 DNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM 828 (1019)
T KOG0203|consen 749 DNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIM 828 (1019)
T ss_pred CcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHH
Confidence 9999999999999999999999999999999832 333345665 4567778899999988874 4455
Q ss_pred hcccc
Q 038599 405 LKNNL 409 (473)
Q Consensus 405 ~~~~~ 409 (473)
+|.++
T Consensus 829 ~r~PR 833 (1019)
T KOG0203|consen 829 LRPPR 833 (1019)
T ss_pred hcCCC
Confidence 44443
No 27
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-44 Score=360.97 Aligned_cols=282 Identities=24% Similarity=0.370 Sum_probs=242.6
Q ss_pred HHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHH
Q 038599 72 FCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVD 151 (473)
Q Consensus 72 ~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~ 151 (473)
.+|+.|+.+.+++-++++++|..|++|++..|||||+|-|+-.-.++++. ++.+.+++...+....-..+.|-.+.|+.
T Consensus 274 IAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~-~gv~~~~la~aa~lsSl~DeTpEGrSIV~ 352 (681)
T COG2216 274 IAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPV-PGVSEEELADAAQLASLADETPEGRSIVE 352 (681)
T ss_pred hhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecC-CCCCHHHHHHHHHHhhhccCCCCcccHHH
Confidence 37899999999999999999999999999999999999999999999998 67888888776665556678899999999
Q ss_pred HHHHcCCCCCCCCc---cccccccC-CceeE-Ee-cCeEEEEcccccc----CCCCCCcch----hHHHHhcCCceeeEe
Q 038599 152 YARSLAIEPVPENV---EDFQNFPG-EGIFG-KI-HGNVIYIGNRRIG----PRTGCSKDS----IAEAKCTGGKTRGYV 217 (473)
Q Consensus 152 ~a~~~~~~~~~~~v---~~~~~~~g-~gv~~-~v-~g~~~~iG~~~~~----~~~~~~~~~----~~~~~~~~G~~vi~v 217 (473)
.+++.++....... .+|.++.. ..+++ .. +++.+++|+.+-+ .+.+-..++ ..++.++.|.+++.+
T Consensus 353 LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V 432 (681)
T COG2216 353 LAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVV 432 (681)
T ss_pred HHHHhccCCCcccccccceeeecceecccccccCCCCceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEE
Confidence 99998765422221 13333322 12333 12 3478999996433 333333333 357778999999999
Q ss_pred eeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-
Q 038599 218 YLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG- 296 (473)
Q Consensus 218 a~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g- 296 (473)
..|++++|++.++|.+||+.+|-+.+||++|++.+|+||||+.||..+|++.|++ .+.++.+||+|.+.|+.-|.+|
T Consensus 433 ~~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~gr 510 (681)
T COG2216 433 VENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGR 510 (681)
T ss_pred EECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
-|+|+|||.||+|||++||||++|+ +|++.++|+++.|=+|+|..++.+++..|++.+-+
T Consensus 511 lVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiT 570 (681)
T COG2216 511 LVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLIT 570 (681)
T ss_pred EEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhheee
Confidence 8999999999999999999999998 99999999999999999999999999999987654
No 28
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=3.6e-42 Score=393.61 Aligned_cols=342 Identities=19% Similarity=0.249 Sum_probs=253.8
Q ss_pred HHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHH------HHHHHC----CceeeCchHhhhhcCccEEEEcCC
Q 038599 36 VAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAF------SKAATT----GLLVKGGDYLEILAKVKMVALDKT 105 (473)
Q Consensus 36 ~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~------~~lak~----gilvk~~~~lE~lg~vd~i~fDKT 105 (473)
.+.+...++|+.|+...++ +..... .+|.++ ++++|+.+..|+||++++||+|||
T Consensus 303 ~~~L~~~~IPisL~v~l~l---------------~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKT 367 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLEL---------------VKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKT 367 (1057)
T ss_pred HHHHHhhhcceeeeehHHH---------------HHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCC
Confidence 3344445667666655544 445555 667764 599999999999999999999999
Q ss_pred CcCCCCceEEEEEEecCCCC-----------------------------------C----------------HHHHHHHH
Q 038599 106 GTVTRGEFTVTDFQSICDDV-----------------------------------S----------------LGTLLYWV 134 (473)
Q Consensus 106 GTLT~g~~~V~~i~~~~~~~-----------------------------------~----------------~~~ll~~~ 134 (473)
||||+|+|++.++...+..+ + ..+.+..+
T Consensus 368 GTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 447 (1057)
T TIGR01652 368 GTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLAL 447 (1057)
T ss_pred CceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHH
Confidence 99999999999986421100 0 01111111
Q ss_pred H---hh--h---c-------cCCChHHHHHHHHHHHcCCCCCC---C----------C--------ccccccccCCceeE
Q 038599 135 S---SI--E---S-------KSSHPMAAALVDYARSLAIEPVP---E----------N--------VEDFQNFPGEGIFG 178 (473)
Q Consensus 135 a---~~--e---~-------~s~hpi~~Ai~~~a~~~~~~~~~---~----------~--------v~~~~~~~g~gv~~ 178 (473)
+ .+ + . ..++|.+.|++++++..|+.... . . ..+|... .+.++.
T Consensus 448 ~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~-rKrmSv 526 (1057)
T TIGR01652 448 ALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSD-RKRMSV 526 (1057)
T ss_pred HhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCC-CCeEEE
Confidence 1 11 1 1 14689999999999887754210 0 0 0111111 122444
Q ss_pred Eec---C--eEEEEccccccCCCCCC--------cchhHHHHhcCCceeeEee---------------------------
Q 038599 179 KIH---G--NVIYIGNRRIGPRTGCS--------KDSIAEAKCTGGKTRGYVY--------------------------- 218 (473)
Q Consensus 179 ~v~---g--~~~~iG~~~~~~~~~~~--------~~~~~~~~~~~G~~vi~va--------------------------- 218 (473)
.++ + ..+.+|+++.+.+.... ..+.+++++.+|+|++.++
T Consensus 527 iv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~ 606 (1057)
T TIGR01652 527 IVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDRE 606 (1057)
T ss_pred EEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHH
Confidence 332 2 24677998776443221 1223678899999998775
Q ss_pred -----------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------
Q 038599 219 -----------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------- 274 (473)
Q Consensus 219 -----------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------- 274 (473)
.|++|+|+++++|++|++++++|+.||++||+++|+|||+.+||.++|+++|+..+
T Consensus 607 ~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~ 686 (1057)
T TIGR01652 607 EKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLD 686 (1057)
T ss_pred HHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchh
Confidence 26789999999999999999999999999999999999999999999999997420
Q ss_pred -----------------------------------------------------------ceehccChhhHHHHHHHHhhC
Q 038599 275 -----------------------------------------------------------MVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 275 -----------------------------------------------------------~v~a~~~P~~K~~~v~~l~~~ 295 (473)
.|++|++|+||.++|+.+|+.
T Consensus 687 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~ 766 (1057)
T TIGR01652 687 ATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKS 766 (1057)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhc
Confidence 289999999999999999998
Q ss_pred -C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCc--cccccccEEEecCCcccHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 038599 296 -G-ATAMVGDGINDAPALAAVDIGISMGISGSA--LAMESGHVILMSNDIRKIPKAI-KLARKASTKLIQNVTLSVTVKG 370 (473)
Q Consensus 296 -g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~--~a~~~ad~vl~~~~l~~l~~~i-~~~r~~~~~i~~n~~~~~~~n~ 370 (473)
| .|+|+|||.||++||++|||||++ .|.+ .|+.+||+++ .+|+.+..++ .+||..++++++.+.|.+.-|+
T Consensus 767 ~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~aaD~~i--~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~ 842 (1057)
T TIGR01652 767 TGKTTLAIGDGANDVSMIQEADVGVGI--SGKEGMQAVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNL 842 (1057)
T ss_pred CCCeEEEEeCCCccHHHHhhcCeeeEe--cChHHHHHHHhhhhhh--hhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 7 899999999999999999999987 4555 5889999999 5699999987 8899999999999999999998
Q ss_pred HHHHHHHH--------h------hHHHHHHHHHHHHHHHHH
Q 038599 371 AVLVLAVA--------G------YPLVWVAVLTDVGTCLVV 397 (473)
Q Consensus 371 ~~~~la~~--------g------~~~~~~a~l~~~~s~l~v 397 (473)
+.++..+. | +...|.+++++.+++++.
T Consensus 843 ~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l 883 (1057)
T TIGR01652 843 IFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISL 883 (1057)
T ss_pred HHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 65544322 1 125677888888887766
No 29
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=338.47 Aligned_cols=344 Identities=21% Similarity=0.285 Sum_probs=266.4
Q ss_pred HHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEE--
Q 038599 40 IFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTD-- 117 (473)
Q Consensus 40 ~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~-- 117 (473)
+++-+|..+|+..+. ..++|..||+++|.++|+..++|.|+.+|++|.|||||||.|+++|.+
T Consensus 285 lIGgiPiamPtVlsv---------------TMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl 349 (942)
T KOG0205|consen 285 LIGGIPIAMPTVLSV---------------TMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 349 (942)
T ss_pred eecccccccceeeee---------------hhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCc
Confidence 445467777776665 889999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHHHhh-hccCCChHHHHHHHHHHHcCCCCCCCCcccccccc--CCceeEEe---cC--eEEEEcc
Q 038599 118 FQSICDDVSLGTLLYWVSSI-ESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFP--GEGIFGKI---HG--NVIYIGN 189 (473)
Q Consensus 118 i~~~~~~~~~~~ll~~~a~~-e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~--g~gv~~~v---~g--~~~~iG~ 189 (473)
+..+.++.+.++++-.++.. .....|.+++|++....+..-.....+..+|..+. .+.+..++ +| +.+.+|.
T Consensus 350 ~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGA 429 (942)
T KOG0205|consen 350 IEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGA 429 (942)
T ss_pred ceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCC
Confidence 65555778888887665444 34456899999998765421111011112222221 12222222 33 4567799
Q ss_pred ccccCCCCCC-------cchhHHHHhcCCceeeEeeeCC-------------eEEEEEEecCccCCchHHHHHHHHhCCC
Q 038599 190 RRIGPRTGCS-------KDSIAEAKCTGGKTRGYVYLGA-------------TPVGTFSLSDSCRSGALEAIKDLKSLGI 249 (473)
Q Consensus 190 ~~~~~~~~~~-------~~~~~~~~~~~G~~vi~va~d~-------------~~lG~i~l~d~lr~~a~~~I~~L~~~gi 249 (473)
|+++.+.+.. ..+.+++++++|+|-+.+++.- .|+|++-+.||+|.+..++|++-.+.|+
T Consensus 430 Peqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv 509 (942)
T KOG0205|consen 430 PEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGV 509 (942)
T ss_pred hHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccc
Confidence 9876332221 1233688999999999988532 6999999999999999999999999999
Q ss_pred eEEEEcCCCHHHHHHHHHHcCCCcc----------------------------ceehccChhhHHHHHHHHhhCC-cEEE
Q 038599 250 KSFILAGDSHAAALYAQDQLDHAFD----------------------------MVYAELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 250 ~v~mlTGD~~~~a~~~a~~~gi~~~----------------------------~v~a~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
+|.|+|||....+...++++|+... .=|+.+.|++|.++|+.||++| .++|
T Consensus 510 ~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gm 589 (942)
T KOG0205|consen 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGM 589 (942)
T ss_pred eeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecc
Confidence 9999999999999999999998643 3478888999999999999999 8999
Q ss_pred EcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 038599 301 VGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSVTVKGAVLVLAVAGY 380 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~~~n~~~~~la~~g~ 380 (473)
.|||.||+|||+.||+||++. .+++.++.++|+|++.+.++.+..++..+|.++++++.+..++++..+-++ +.++-+
T Consensus 590 tgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~ 667 (942)
T KOG0205|consen 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLI 667 (942)
T ss_pred cCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHH
Confidence 999999999999999999997 889999999999999999999999999999999999999888777655433 333333
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 038599 381 PLVWVAVLTDVGTCLVVILN 400 (473)
Q Consensus 381 ~~~~~a~l~~~~s~l~v~~n 400 (473)
...|-..+......++.++|
T Consensus 668 alIw~~df~pfmvliiailn 687 (942)
T KOG0205|consen 668 ALIWEFDFSPFMVLIIAILN 687 (942)
T ss_pred HHHHHhcCCHHHHHHHHHhc
Confidence 34454444333344555555
No 30
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=323.02 Aligned_cols=343 Identities=19% Similarity=0.208 Sum_probs=245.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhhcchhH-------H---HHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 038599 7 WPAPSVMASGLLLALSFLGYIYHPLQ-------S---LAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFS 76 (473)
Q Consensus 7 ~~~~~~i~~~i~~~~~~~~~~~~~~~-------~---~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~ 76 (473)
|-+.+.|...++|.+....|.|.... + +-...++..++|+-||+..++ |+..++.
T Consensus 394 ~Etf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSm---------------AVNsSL~ 458 (1160)
T KOG0209|consen 394 RETFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSM---------------AVNSSLI 458 (1160)
T ss_pred HHHHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhH---------------HHHHHHH
Confidence 44455555545555555555543221 1 222233445566678887776 8999999
Q ss_pred HHHHCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCC---------CHHHH--HHHHHhh---h-ccC
Q 038599 77 KAATTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV---------SLGTL--LYWVSSI---E-SKS 141 (473)
Q Consensus 77 ~lak~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~---------~~~~l--l~~~a~~---e-~~s 141 (473)
.|+|.||+|..|-+|.-+|++|+.|||||||||++.|.|.++...+.+. ..+.+ +.-++++ | .-.
T Consensus 459 ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lV 538 (1160)
T KOG0209|consen 459 ALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLV 538 (1160)
T ss_pred HHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCccc
Confidence 9999999999999999999999999999999999999999987643322 11222 2223333 3 356
Q ss_pred CChHHHHHHHHHHHcC-----CCCCCCCcccccccc---------CCceeEEecC-------eEEEEccccccCC----C
Q 038599 142 SHPMAAALVDYARSLA-----IEPVPENVEDFQNFP---------GEGIFGKIHG-------NVIYIGNRRIGPR----T 196 (473)
Q Consensus 142 ~hpi~~Ai~~~a~~~~-----~~~~~~~v~~~~~~~---------g~gv~~~v~g-------~~~~iG~~~~~~~----~ 196 (473)
+||+++|.++.....- ..+........+.+. ...+.+..++ -.-.+|+|+.+.+ .
T Consensus 539 GDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv 618 (1160)
T KOG0209|consen 539 GDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV 618 (1160)
T ss_pred CChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC
Confidence 8999999999864321 111111101111110 0011111111 1233588876533 3
Q ss_pred CCCcchhHHHHhcCCceeeEeee---------------------CCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEc
Q 038599 197 GCSKDSIAEAKCTGGKTRGYVYL---------------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILA 255 (473)
Q Consensus 197 ~~~~~~~~~~~~~~G~~vi~va~---------------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT 255 (473)
..++++...++..+|.||+++++ |++|.|++.|.-|+|+|++++|++|++.+++++|+|
T Consensus 619 P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMIT 698 (1160)
T KOG0209|consen 619 PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMIT 698 (1160)
T ss_pred chhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEe
Confidence 33445557889999999998862 679999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCcc-------------------------------------------------------------
Q 038599 256 GDSHAAALYAQDQLDHAFD------------------------------------------------------------- 274 (473)
Q Consensus 256 GD~~~~a~~~a~~~gi~~~------------------------------------------------------------- 274 (473)
|||+.||.++|+++||...
T Consensus 699 GDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~ 778 (1160)
T KOG0209|consen 699 GDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLR 778 (1160)
T ss_pred CCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHH
Confidence 9999999999999998652
Q ss_pred ------ceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeCCCCCc---------------------
Q 038599 275 ------MVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIGISMGISGSA--------------------- 326 (473)
Q Consensus 275 ------~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~--------------------- 326 (473)
.||||+.|.||..+|..|++.| .++|||||.||+.|||+||||||+-.+..+
T Consensus 779 ~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~ 858 (1160)
T KOG0209|consen 779 RLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQT 858 (1160)
T ss_pred HhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhH
Confidence 6899999999999999999999 899999999999999999999997412110
Q ss_pred -------------------------------------------------cccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 327 -------------------------------------------------LAMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 327 -------------------------------------------------~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
.|.-+|.+.....+++.+-++|+.||.+.-+
T Consensus 859 ~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVt 938 (1160)
T KOG0209|consen 859 IAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVT 938 (1160)
T ss_pred HHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHH
Confidence 1122345555556788999999999999988
Q ss_pred HHHHHHH
Q 038599 358 LIQNVTL 364 (473)
Q Consensus 358 i~~n~~~ 364 (473)
..|.+.+
T Consensus 939 TlQMfKI 945 (1160)
T KOG0209|consen 939 TLQMFKI 945 (1160)
T ss_pred HHHHHHH
Confidence 8887754
No 31
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.4e-35 Score=334.74 Aligned_cols=289 Identities=19% Similarity=0.218 Sum_probs=219.0
Q ss_pred ceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCC-------------------------------------
Q 038599 83 LLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV------------------------------------- 125 (473)
Q Consensus 83 ilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~------------------------------------- 125 (473)
+.+|+.+..|+||+|++|+.|||||||+|+|++.++...+..+
T Consensus 439 ~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1178)
T PLN03190 439 FQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLE 518 (1178)
T ss_pred ceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHh
Confidence 7899999999999999999999999999999999975421000
Q ss_pred ------C-H-----HHHHH---HHHhh-----h-----------ccCCChHHHHHHHHHHHcCCCC------------C-
Q 038599 126 ------S-L-----GTLLY---WVSSI-----E-----------SKSSHPMAAALVDYARSLAIEP------------V- 161 (473)
Q Consensus 126 ------~-~-----~~ll~---~~a~~-----e-----------~~s~hpi~~Ai~~~a~~~~~~~------------~- 161 (473)
+ . .+.+. +.+.+ + ..+.+|.+.|++.++...|+.. .
T Consensus 519 ~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~ 598 (1178)
T PLN03190 519 LSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG 598 (1178)
T ss_pred hhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc
Confidence 0 0 01111 11111 1 1234899999999999888621 0
Q ss_pred -CCC-----ccccccccCCceeEEec---C--eEEEEccccccCCCCCC---------cchhHHHHhcCCceeeEee---
Q 038599 162 -PEN-----VEDFQNFPGEGIFGKIH---G--NVIYIGNRRIGPRTGCS---------KDSIAEAKCTGGKTRGYVY--- 218 (473)
Q Consensus 162 -~~~-----v~~~~~~~g~gv~~~v~---g--~~~~iG~~~~~~~~~~~---------~~~~~~~~~~~G~~vi~va--- 218 (473)
... +.+|... .+.++..++ + ..+.+|+++.+.+.... ....+++++++|+|++.++
T Consensus 599 ~~~~~~il~~~pF~S~-rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~ 677 (1178)
T PLN03190 599 ERQRFNVLGLHEFDSD-RKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRE 677 (1178)
T ss_pred ceecceeEEEeccccc-ccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEe
Confidence 000 1122221 123333332 2 24667998876443321 1233678899999998764
Q ss_pred -----------------------------------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 038599 219 -----------------------------------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL 263 (473)
Q Consensus 219 -----------------------------------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~ 263 (473)
.|++++|+++++|++|++++++|++|+++|++++|+|||+..||.
T Consensus 678 l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi 757 (1178)
T PLN03190 678 LNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAI 757 (1178)
T ss_pred CCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHH
Confidence 367899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCcc---------------------------------------------------------------------
Q 038599 264 YAQDQLDHAFD--------------------------------------------------------------------- 274 (473)
Q Consensus 264 ~~a~~~gi~~~--------------------------------------------------------------------- 274 (473)
++|+++|+..+
T Consensus 758 ~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~ 837 (1178)
T PLN03190 758 SIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEE 837 (1178)
T ss_pred HHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHH
Confidence 99986665100
Q ss_pred -----------ceehccChhhHHHHHHHHhhC-C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCc--cccccccEEEecC
Q 038599 275 -----------MVYAELLPQHKEELVELLKKD-G-ATAMVGDGINDAPALAAVDIGISMGISGSA--LAMESGHVILMSN 339 (473)
Q Consensus 275 -----------~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~--~a~~~ad~vl~~~ 339 (473)
.+++|++|+||+++|+.+|+. + .|+|+|||.||++||++|||||++ +|.+ .|..+||+.+ .
T Consensus 838 ~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGI--sG~EG~qA~~aSDfaI--~ 913 (1178)
T PLN03190 838 QLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMASDFAM--G 913 (1178)
T ss_pred HHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeee--cCchhHHHHHhhccch--h
Confidence 268999999999999999987 4 799999999999999999999976 5666 7788999999 8
Q ss_pred CcccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 340 DIRKIPKAIK-LARKASTKLIQNVTLSVTVKGAVLVLA 376 (473)
Q Consensus 340 ~l~~l~~~i~-~~r~~~~~i~~n~~~~~~~n~~~~~la 376 (473)
.|..+.+++- .||..++++...+.|.+--|++..+.-
T Consensus 914 ~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 914 QFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred hhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999775 999999999999999888888655443
No 32
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.98 E-value=1.3e-32 Score=259.75 Aligned_cols=207 Identities=33% Similarity=0.496 Sum_probs=176.6
Q ss_pred ccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCCCCCccccccccCCce
Q 038599 97 VKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPVPENVEDFQNFPGEGI 176 (473)
Q Consensus 97 vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~~~~g~gv 176 (473)
||+||||||||||++++.+ .. .....++.++...+..+.||++.++..+.......+ . +.++..+++.|+
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~----~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~ 70 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP----PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWSK--S-LESFSEFIGRGI 70 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES----CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHHS--C-CEEEEEETTTEE
T ss_pred CeEEEEecCCCcccCeEEE---Ee----ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccchh--h-hhhheeeeeccc
Confidence 6899999999999999999 11 567888999999999999999999999987632221 1 778889999999
Q ss_pred eEEecCeEEEEccccccCCCCCCcc---hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEE
Q 038599 177 FGKIHGNVIYIGNRRIGPRTGCSKD---SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFI 253 (473)
Q Consensus 177 ~~~v~g~~~~iG~~~~~~~~~~~~~---~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~m 253 (473)
.+.+++. +. |+++++.+...... ........++.+.++++.+..++|.+.+.|++||+++++|++|+++|++++|
T Consensus 71 ~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i 148 (215)
T PF00702_consen 71 SGDVDGI-YL-GSPEWIHELGIRVISPDLVEEIQESQGRTVIVLAVNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAI 148 (215)
T ss_dssp EEEEHCH-EE-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEE
T ss_pred ccccccc-cc-ccchhhhhccccccccchhhhHHHhhCCcccceeecCeEEEEEeecCcchhhhhhhhhhhhccCcceee
Confidence 9998887 55 88887655443321 1122335566677888889999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCccceehcc--ChhhH--HHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 254 LAGDSHAAALYAQDQLDHAFDMVYAEL--LPQHK--EELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 254 lTGD~~~~a~~~a~~~gi~~~~v~a~~--~P~~K--~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
+|||+..++.++++++||....++++. +|++| .++++.||.++ .|+|||||.||++|+++||
T Consensus 149 ~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 149 LTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred eeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 999999999999999999855699999 99999 99999999665 9999999999999999997
No 33
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=99.95 E-value=3.4e-27 Score=243.10 Aligned_cols=282 Identities=20% Similarity=0.255 Sum_probs=198.0
Q ss_pred CCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCH---HHHHHHHHhhhc-----------cCCChHH
Q 038599 81 TGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSL---GTLLYWVSSIES-----------KSSHPMA 146 (473)
Q Consensus 81 ~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~---~~ll~~~a~~e~-----------~s~hpi~ 146 (473)
.|.++|+...-|+||++..+..|||||||+|+|++++++-..-.++. +++-+...++.. ...||..
T Consensus 391 pgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s 470 (1051)
T KOG0210|consen 391 PGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMS 470 (1051)
T ss_pred CceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCccc
Confidence 48899999999999999999999999999999999999865333332 233333333321 0113332
Q ss_pred H----HHHHHHHHcCCCCCCCC---------------------------------------------------ccccccc
Q 038599 147 A----ALVDYARSLAIEPVPEN---------------------------------------------------VEDFQNF 171 (473)
Q Consensus 147 ~----Ai~~~a~~~~~~~~~~~---------------------------------------------------v~~~~~~ 171 (473)
. ++...+--.++.|..+. +.+|+..
T Consensus 471 ~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsE 550 (1051)
T KOG0210|consen 471 ARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSE 550 (1051)
T ss_pred HHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccc
Confidence 2 22222222222221111 0001100
Q ss_pred -cCCceeEEec--Ce--EEEEccccccCC----CCCCcchhHHHHhcCCceeeEee------------------------
Q 038599 172 -PGEGIFGKIH--GN--VIYIGNRRIGPR----TGCSKDSIAEAKCTGGKTRGYVY------------------------ 218 (473)
Q Consensus 172 -~g~gv~~~v~--g~--~~~iG~~~~~~~----~~~~~~~~~~~~~~~G~~vi~va------------------------ 218 (473)
...|+..+-+ ++ .+.+|+.-.|.. +.+ .+++..+++.+|.|++.++
T Consensus 551 tKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~NdW-leEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~ 629 (1051)
T KOG0210|consen 551 TKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYNDW-LEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSIS 629 (1051)
T ss_pred cceeeEEEecCCCceEEEEEecchHHHhcccccchh-hhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccc
Confidence 0112222211 21 234455433221 111 1333567788999988875
Q ss_pred ---------------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------
Q 038599 219 ---------------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------- 274 (473)
Q Consensus 219 ---------------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------- 274 (473)
+|+.++|+-+.+|.+.++++.+++.||++|+++||+|||..+||.-+|+..++...
T Consensus 630 dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~ 709 (1051)
T KOG0210|consen 630 DRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRS 709 (1051)
T ss_pred hHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEe
Confidence 36789999999999999999999999999999999999999999999998887652
Q ss_pred -------------------------------------------------ceehccChhhHHHHHHHHhhC-C-cEEEEcC
Q 038599 275 -------------------------------------------------MVYAELLPQHKEELVELLKKD-G-ATAMVGD 303 (473)
Q Consensus 275 -------------------------------------------------~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGD 303 (473)
.+.+|++|+||+++++.+|++ | .|+.+||
T Consensus 710 v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGD 789 (1051)
T KOG0210|consen 710 VTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGD 789 (1051)
T ss_pred cCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcC
Confidence 688999999999999999988 5 8999999
Q ss_pred CcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH-HHHHHHHHHHHHHHHH
Q 038599 304 GINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK-LARKASTKLIQNVTLS 365 (473)
Q Consensus 304 G~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~-~~r~~~~~i~~n~~~~ 365 (473)
|-||+.|+++||+||..-......|.-+||+.+ ..|+.+.+++- .||..+++.-+--.|.
T Consensus 790 GGNDVsMIq~A~~GiGI~gkEGkQASLAADfSI--tqF~Hv~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 790 GGNDVSMIQAADVGIGIVGKEGKQASLAADFSI--TQFSHVSRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred CCccchheeecccceeeecccccccchhccccH--HHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 999999999999999974455566778999999 67999988664 6788887765554443
No 34
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=99.90 E-value=1.1e-23 Score=234.31 Aligned_cols=294 Identities=19% Similarity=0.229 Sum_probs=211.3
Q ss_pred HCCceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCC----C-----------------------------
Q 038599 80 TTGLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDV----S----------------------------- 126 (473)
Q Consensus 80 k~gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~----~----------------------------- 126 (473)
.....+|..+--|.||+|++|..|||||||+|.|++.+....+..+ +
T Consensus 370 d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 449 (1151)
T KOG0206|consen 370 DTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRL 449 (1151)
T ss_pred CCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchh
Confidence 3567889999999999999999999999999999998864332110 0
Q ss_pred -------------HHHH---HHHHHh-----------hhccCCChHHHHHHHHHHHcCCCCCCCCccccc----------
Q 038599 127 -------------LGTL---LYWVSS-----------IESKSSHPMAAALVDYARSLAIEPVPENVEDFQ---------- 169 (473)
Q Consensus 127 -------------~~~l---l~~~a~-----------~e~~s~hpi~~Ai~~~a~~~~~~~~~~~v~~~~---------- 169 (473)
..+. +.+.+. +......|.+.|++..+++.|+...........
T Consensus 450 ~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y 529 (1151)
T KOG0206|consen 450 VDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETY 529 (1151)
T ss_pred hccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeE
Confidence 0011 111111 122346899999999999988653111110000
Q ss_pred ------cc--cCCceeEEec---Ce--EEEEccccccCCCCC----Ccc----hhHHHHhcCCceeeEee----------
Q 038599 170 ------NF--PGEGIFGKIH---GN--VIYIGNRRIGPRTGC----SKD----SIAEAKCTGGKTRGYVY---------- 218 (473)
Q Consensus 170 ------~~--~g~gv~~~v~---g~--~~~iG~~~~~~~~~~----~~~----~~~~~~~~~G~~vi~va---------- 218 (473)
++ ..+.++..+. |+ .+.+|+...+-+.-. ... .-+++++.+|.|.++++
T Consensus 530 ~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~ 609 (1151)
T KOG0206|consen 530 ELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYE 609 (1151)
T ss_pred EEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHH
Confidence 00 0122333331 21 345566544322111 111 12678899999998875
Q ss_pred ----------------------------eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 038599 219 ----------------------------LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD 270 (473)
Q Consensus 219 ----------------------------~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g 270 (473)
.|++++|.-+++|++.++++|+|+.|+++||++||+|||..+||..++-.|+
T Consensus 610 ~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~ 689 (1151)
T KOG0206|consen 610 EWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCR 689 (1151)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhc
Confidence 3789999999999999999999999999999999999999999999998877
Q ss_pred CCcc----------------------------------------------------------------------------
Q 038599 271 HAFD---------------------------------------------------------------------------- 274 (473)
Q Consensus 271 i~~~---------------------------------------------------------------------------- 274 (473)
+..+
T Consensus 690 Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C 769 (1151)
T KOG0206|consen 690 LLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRC 769 (1151)
T ss_pred CCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhc
Confidence 6431
Q ss_pred --ceehccChhhHHHHHHHHhhC-C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHH-H
Q 038599 275 --MVYAELLPQHKEELVELLKKD-G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAI-K 349 (473)
Q Consensus 275 --~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i-~ 349 (473)
.+..|++|-||+.+|+..++. + .++.+|||.||.+|++.|||||.++..+.-.|..++|+-+ .-|.-+..++ -
T Consensus 770 ~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AI--aqFrfL~rLLLV 847 (1151)
T KOG0206|consen 770 KSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAI--AQFRFLERLLLV 847 (1151)
T ss_pred CEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchH--HHHHHHhhhhee
Confidence 678899999999999999754 5 8999999999999999999999985455556777889887 4566666543 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 038599 350 LARKASTKLIQNVTLSVTVKGAVLVL 375 (473)
Q Consensus 350 ~~r~~~~~i~~n~~~~~~~n~~~~~l 375 (473)
.||=.+.++.+.+.+.+-.|+...+.
T Consensus 848 HGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 848 HGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred ecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888888888777755443
No 35
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.70 E-value=9.3e-17 Score=134.98 Aligned_cols=125 Identities=24% Similarity=0.344 Sum_probs=109.5
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEE
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~ 299 (473)
+...+.+.-.-.+-+++.+.|++|++. +++++.|||...+....|+-+||+.+.+++...|+.|.++++.|++.+ +|.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~v 97 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVV 97 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEE
Confidence 456677777888899999999999999 999999999999999999999999999999999999999999999887 999
Q ss_pred EEcCCcccHHHHHHCCeeEEeCCC--CCccccccccEEEecCCcccHHHHH
Q 038599 300 MVGDGINDAPALAAVDIGISMGIS--GSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~g~~--~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|||||.||.+||++||+||..-.. ..+-+.++||+++ .++..+.++.
T Consensus 98 mVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvi--k~i~e~ldl~ 146 (152)
T COG4087 98 MVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL--KEIAEILDLL 146 (152)
T ss_pred EecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhh--hhHHHHHHHh
Confidence 999999999999999999985322 2345568999998 6666665544
No 36
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.22 E-value=5.2e-11 Score=112.09 Aligned_cols=115 Identities=17% Similarity=0.107 Sum_probs=99.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh--------c-------cChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA--------E-------LLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a--------~-------~~P~~K~~~v~~l~~~g 296 (473)
+++|++.+.|+.+|+.+ ++.++||-....+..+++++|++ .+++ + ..+++|...++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 57999999999999975 99999999999999999999997 5554 1 34679999999998888
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
.+.|+|||.||.++++.||+|+++ .+.+..+++||-.-.-.+.+.+...+.++
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~--~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILF--HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEe--cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999999999999999999999 57777777777666667788888777766
No 37
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.08 E-value=4.9e-10 Score=112.54 Aligned_cols=115 Identities=25% Similarity=0.322 Sum_probs=98.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~~ 294 (473)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++ .++++ ...+.|.+.++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 57999999999999999999999999988889999999997 43321 134689999988865
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHH
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+ | .+.++|||.||.+|++.|++|+++ ++.+..++.||.++...++.++..++..
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~~ 317 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILSG 317 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhcc
Confidence 4 3 699999999999999999999999 6888889999999988899888877653
No 38
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.02 E-value=1e-09 Score=104.18 Aligned_cols=112 Identities=25% Similarity=0.362 Sum_probs=93.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~~ 294 (473)
+++|++.+.++.|++.|+++.++||.....+..+.+++|+. .+++. ..++.|..+++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLD--AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC--ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 58999999999999999999999999999999999999997 45532 113347777776544
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHH
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
+ + .+.|+||+.+|.++++.|++++++ .+.+..++.||.++.++++..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~--~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAF--NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEe--CCCHHHHHhchhccCCCCHHHHHhh
Confidence 3 2 599999999999999999999999 4677788899999999888777654
No 39
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.00 E-value=4.7e-09 Score=94.49 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=81.0
Q ss_pred HHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC
Q 038599 240 AIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 240 ~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A 314 (473)
+|++|+++|+++.++||++...+..+.+++|+. .++... ..|...++.+.++ . .++|+||+.||.++++.|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 899999999999999999999999999999997 555543 4566666665432 2 799999999999999999
Q ss_pred CeeEEeCCCCCccccccccEEEecCC
Q 038599 315 DIGISMGISGSALAMESGHVILMSND 340 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~ 340 (473)
++++++. .+.+..+..+++++..+.
T Consensus 112 g~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 112 GLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred CCeEecC-CcCHHHHHhCCEEecCCC
Confidence 9999997 677788889999996554
No 40
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.95 E-value=6e-09 Score=99.64 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=103.3
Q ss_pred eeeEeeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------
Q 038599 213 TRGYVYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------- 274 (473)
+.++.-.||+++- .|. +.+.+.++|++|++.|+++++.||.+...+..+.+++|+...
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 4 KAIAIDIDGTITD----KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred eEEEEecCCCcCC----CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCE
Confidence 4566667888762 333 678999999999999999999999999999999999998642
Q ss_pred ------------------c------e------------------------------------------ehccChh--hHH
Q 038599 275 ------------------M------V------------------------------------------YAELLPQ--HKE 286 (473)
Q Consensus 275 ------------------~------v------------------------------------------~a~~~P~--~K~ 286 (473)
. . +.+..|. .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg 159 (230)
T PRK01158 80 IFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKG 159 (230)
T ss_pred EEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChH
Confidence 0 0 0011111 355
Q ss_pred HHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 287 ELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 287 ~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
..++.+.++ | .++++||+.||.+|++.|++|++|+ ++.+..++.||++..+++-.++.++++
T Consensus 160 ~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 160 TGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 666655443 2 6999999999999999999999998 899999999999998888888887765
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.94 E-value=6.4e-09 Score=102.03 Aligned_cols=133 Identities=20% Similarity=0.244 Sum_probs=101.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--c----------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--D---------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~---------------- 274 (473)
+.++.-.||+++. -...+.+.++++|++|+++|+++++.||.+...+..+.+++|+.. .
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLL---PDHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcC---CCCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 4556667888864 134588899999999999999999999999999999999999742 1
Q ss_pred ---------------------------------ceeh--------------------------cc-------------Ch
Q 038599 275 ---------------------------------MVYA--------------------------EL-------------LP 282 (473)
Q Consensus 275 ---------------------------------~v~a--------------------------~~-------------~P 282 (473)
.++. .+ .+
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEP 160 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCH
Confidence 0000 00 00
Q ss_pred ----------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCC
Q 038599 283 ----------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGIS 323 (473)
Q Consensus 283 ----------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~ 323 (473)
-.|..-++.|.++ | .|+.+||+.||.+||+.|++|++|+ +
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-N 239 (270)
T PRK10513 161 EILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-N 239 (270)
T ss_pred HHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-C
Confidence 1233333333332 3 5899999999999999999999998 9
Q ss_pred CCccccccccEEEecCCcccHHHHHH
Q 038599 324 GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 324 ~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+.+..++.||+|..+++-.++..+++
T Consensus 240 A~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 240 AIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ccHHHHHhcCeeccCCCcchHHHHHH
Confidence 99999999999998888888887765
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.94 E-value=5.9e-09 Score=102.07 Aligned_cols=133 Identities=23% Similarity=0.296 Sum_probs=107.8
Q ss_pred eeeEeeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------------
Q 038599 213 TRGYVYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD----------------- 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~----------------- 274 (473)
+.+++-.||+++. .+. +.+.++++|+++++.|+++.++||.+...+..+.+++|+...
T Consensus 4 kli~~DlDGTLl~----~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 79 (264)
T COG0561 4 KLLAFDLDGTLLD----SNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLF 79 (264)
T ss_pred eEEEEcCCCCccC----CCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEe
Confidence 4566667777653 333 899999999999999999999999999999999999999852
Q ss_pred ------------------------cee-----------------------------------------------------
Q 038599 275 ------------------------MVY----------------------------------------------------- 277 (473)
Q Consensus 275 ------------------------~v~----------------------------------------------------- 277 (473)
.++
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (264)
T COG0561 80 QKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELV 159 (264)
T ss_pred eecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHH
Confidence 000
Q ss_pred ---------------------hccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccc
Q 038599 278 ---------------------AELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAM 329 (473)
Q Consensus 278 ---------------------a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~ 329 (473)
-+..| .+|...++.|.++ | .|+.+||+.||.+||+.|+.|++|+ ++.+..+
T Consensus 160 ~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k 238 (264)
T COG0561 160 EALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELK 238 (264)
T ss_pred HHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHH
Confidence 01111 2777777777663 4 4999999999999999999999999 8899999
Q ss_pred ccccEEEecCCcccHHHHHHH
Q 038599 330 ESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 330 ~~ad~vl~~~~l~~l~~~i~~ 350 (473)
+.||++..+++-.++...++.
T Consensus 239 ~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 239 ELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred hhCCcccCCccchHHHHHHHH
Confidence 999988888888888887764
No 43
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.93 E-value=4.7e-09 Score=99.58 Aligned_cols=130 Identities=17% Similarity=0.141 Sum_probs=103.5
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------- 274 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------- 274 (473)
.++.-.||+++. =...+.+++.++|++|++.|++++++||.+...+..+.+++++...
T Consensus 3 ~v~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~ 79 (215)
T TIGR01487 3 LVAIDIDGTLTE---PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLA 79 (215)
T ss_pred EEEEecCCCcCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEe
Confidence 455667888763 2234888999999999999999999999999999999999998732
Q ss_pred ----------------------------------------------------c----eehccC--hhhHHHHHHHHhhC-
Q 038599 275 ----------------------------------------------------M----VYAELL--PQHKEELVELLKKD- 295 (473)
Q Consensus 275 ----------------------------------------------------~----v~a~~~--P~~K~~~v~~l~~~- 295 (473)
. .+.+.. ..+|...++.+.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 159 (215)
T TIGR01487 80 NMEEEWFLDEEKKKRFPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELL 159 (215)
T ss_pred cccchhhHHHhhhhhhhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHh
Confidence 0 011111 24788888877654
Q ss_pred C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHH
Q 038599 296 G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 296 g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
| .++++||+.||.+|++.|++|++|+ ++.+..++.||++..+++-.++.++
T Consensus 160 ~i~~~~~i~iGDs~ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 160 GIKPEEVAAIGDSENDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred CCCHHHEEEECCCHHHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 3 5999999999999999999999998 8999999999999977776666654
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.91 E-value=5e-09 Score=97.03 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=100.9
Q ss_pred CCceeeEeeeCCeEEE-EEEe-c--CccCCchH---HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccCh
Q 038599 210 GGKTRGYVYLGATPVG-TFSL-S--DSCRSGAL---EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLP 282 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG-~i~l-~--d~lr~~a~---~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P 282 (473)
++.+.+.+-.|++++. -+.+ . .++++... .+|+.|+++|+++.++||.+...+..+++++|+. .+|.. .
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g--~ 94 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG--Q 94 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC--C
Confidence 4567777778888763 1111 1 11222222 6899999999999999999999999999999997 66654 3
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLARK 353 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~r~ 353 (473)
++|...++.+.++ | .++||||+.||.++++.|+++++++ .+.+..+..+|+++..+. +..+.+.+...|-
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 5677776665433 3 6999999999999999999999986 667777788999985332 4445555544443
No 45
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.88 E-value=1.2e-08 Score=93.02 Aligned_cols=101 Identities=15% Similarity=0.205 Sum_probs=82.4
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC--hhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL--PQHKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~--P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
.+|+.|++.|+++.++|+.+...+....+.+|+. .+|.... |+....+++.++-.. .++|+||+.||.++++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 5899999999999999999999999999999998 6665553 333344444443333 7999999999999999999
Q ss_pred eeEEeCCCCCccccccccEEEecCCcc
Q 038599 316 IGISMGISGSALAMESGHVILMSNDIR 342 (473)
Q Consensus 316 vgIa~g~~~~~~a~~~ad~vl~~~~l~ 342 (473)
++++|+ ++.+..+..|++|+..++=.
T Consensus 119 ~~~am~-nA~~~lk~~A~~I~~~~~~~ 144 (169)
T TIGR02726 119 LAVAVG-DAVADVKEAAAYVTTARGGH 144 (169)
T ss_pred CeEECc-CchHHHHHhCCEEcCCCCCC
Confidence 999997 88888999999998655433
No 46
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.87 E-value=1.1e-08 Score=100.51 Aligned_cols=133 Identities=16% Similarity=0.140 Sum_probs=101.5
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.++.-.||+++. -...+.+.++++|++|+++|+++++.||.+...+..+.+++|+...
T Consensus 3 kli~~DlDGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~ 79 (272)
T PRK15126 3 RLAAFDMDGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLH 79 (272)
T ss_pred cEEEEeCCCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEE
Confidence 3455667888763 2335888999999999999999999999999999999999998632
Q ss_pred -----------------------------ce-------------------------------------------------
Q 038599 275 -----------------------------MV------------------------------------------------- 276 (473)
Q Consensus 275 -----------------------------~v------------------------------------------------- 276 (473)
.+
T Consensus 80 ~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~ 159 (272)
T PRK15126 80 RQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQ 159 (272)
T ss_pred eecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHH
Confidence 00
Q ss_pred -------------------ehccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccc
Q 038599 277 -------------------YAELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAME 330 (473)
Q Consensus 277 -------------------~a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~ 330 (473)
+-+..| -.|..-++.|.++ | .|+.+||+.||.+||+.|+.|++|+ ++.+..++
T Consensus 160 ~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~ 238 (272)
T PRK15126 160 IQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRA 238 (272)
T ss_pred HHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHH
Confidence 000011 1455555555443 3 5999999999999999999999999 99999999
Q ss_pred cccE--EEecCCcccHHHHHH
Q 038599 331 SGHV--ILMSNDIRKIPKAIK 349 (473)
Q Consensus 331 ~ad~--vl~~~~l~~l~~~i~ 349 (473)
.||. ++.+++-.++..+++
T Consensus 239 ~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 239 ELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred hCCCCeecCCCcchHHHHHHH
Confidence 9986 666777777777664
No 47
>PRK10976 putative hydrolase; Provisional
Probab=98.86 E-value=1.6e-08 Score=99.04 Aligned_cols=133 Identities=23% Similarity=0.243 Sum_probs=99.7
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.+++-.||+++- -...+.+.+.++|++++++|+++++.||.+...+..+.+++|+...
T Consensus 3 kli~~DlDGTLl~---~~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 79 (266)
T PRK10976 3 QVVASDLDGTLLS---PDHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIF 79 (266)
T ss_pred eEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEeh
Confidence 3556667888763 1334788999999999999999999999999999999999998632
Q ss_pred ------------------------------ceeh----------------------------------------------
Q 038599 275 ------------------------------MVYA---------------------------------------------- 278 (473)
Q Consensus 275 ------------------------------~v~a---------------------------------------------- 278 (473)
.++.
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~ 159 (266)
T PRK10976 80 SHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLP 159 (266)
T ss_pred hhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHH
Confidence 0000
Q ss_pred -----------------------ccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccc
Q 038599 279 -----------------------ELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALA 328 (473)
Q Consensus 279 -----------------------~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a 328 (473)
+..| ..|..-++.|.++ | .|+.+||+.||.+||+.|+.|++|+ ++.+..
T Consensus 160 ~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~v 238 (266)
T PRK10976 160 LEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRL 238 (266)
T ss_pred HHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHH
Confidence 0000 1344444444333 3 5999999999999999999999999 999999
Q ss_pred ccccc--EEEecCCcccHHHHHH
Q 038599 329 MESGH--VILMSNDIRKIPKAIK 349 (473)
Q Consensus 329 ~~~ad--~vl~~~~l~~l~~~i~ 349 (473)
++.|| .|+.+++-.++..+++
T Consensus 239 K~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 239 KDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHhCCCCeecccCchHHHHHHHH
Confidence 99987 6776777777777664
No 48
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.85 E-value=8e-09 Score=97.82 Aligned_cols=104 Identities=23% Similarity=0.245 Sum_probs=84.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------ceehc-cChhhHHHHHHHHhhC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------------MVYAE-LLPQHKEELVELLKKD 295 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------------~v~a~-~~P~~K~~~v~~l~~~ 295 (473)
.+++|++.+.++.++++|++++++||-...-+..+++++|++.. .+... +..+.|...++.+.++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999842 11111 2247899999777654
Q ss_pred -C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEE
Q 038599 296 -G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVIL 336 (473)
Q Consensus 296 -g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl 336 (473)
| .+.++|||.||.|+|+.|+.+++.+ ..+..+..|+...
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~ 199 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRI 199 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhc
Confidence 4 4999999999999999999999994 5544555555544
No 49
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.83 E-value=2.1e-08 Score=94.06 Aligned_cols=112 Identities=23% Similarity=0.256 Sum_probs=87.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc---------------cChhhHHHHHHHHhhCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE---------------LLPQHKEELVELLKKDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~---------------~~P~~K~~~v~~l~~~g 296 (473)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+. .+++. ..|+.|...++.++..+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~--~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWP--TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCc--hhhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 4589999999999999 999999999999999999999986 33321 24788989999888777
Q ss_pred -cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccE-EEecCCcccHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHV-ILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~-vl~~~~l~~l~~~i~ 349 (473)
.+.|+||+.||.++.++|++|+..+ ...+.....++. ++ +++..+...++
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 8999999999999999999999886 333333334454 44 56666655443
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.81 E-value=5.6e-08 Score=95.29 Aligned_cols=133 Identities=20% Similarity=0.246 Sum_probs=99.7
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------ 274 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------ 274 (473)
+.++.-.||+++. =...+.+.+.++|++++++|+++++.||.+...+..+.+++|+...
T Consensus 4 kli~~DlDGTLl~---~~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l 80 (272)
T PRK10530 4 RVIALDLDGTLLT---PKKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVL 80 (272)
T ss_pred cEEEEeCCCceEC---CCCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEE
Confidence 4566677888862 2234788999999999999999999999999999999999988642
Q ss_pred ------------------------------cee-hc--------------c-----------------------------
Q 038599 275 ------------------------------MVY-AE--------------L----------------------------- 280 (473)
Q Consensus 275 ------------------------------~v~-a~--------------~----------------------------- 280 (473)
.++ .. .
T Consensus 81 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 160 (272)
T PRK10530 81 EADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFAL 160 (272)
T ss_pred EecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEE
Confidence 000 00 0
Q ss_pred -Ch----------------------------------hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 281 -LP----------------------------------QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 281 -~P----------------------------------~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
.+ .+|...++.+.++ | .++++||+.||.+|++.|++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam 240 (272)
T PRK10530 161 THEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM 240 (272)
T ss_pred ecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe
Confidence 00 0122222222221 3 599999999999999999999999
Q ss_pred CCCCCccccccccEEEecCCcccHHHHHH
Q 038599 321 GISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 321 g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
| ++.+..++.||.++.+++-.++..+++
T Consensus 241 g-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 241 G-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred c-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 9 778888999999998888888888775
No 51
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.81 E-value=2.6e-08 Score=94.87 Aligned_cols=127 Identities=22% Similarity=0.257 Sum_probs=98.6
Q ss_pred eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------
Q 038599 219 LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------ 274 (473)
Q Consensus 219 ~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------ 274 (473)
.|++++- -...+.+.+.++|+++++.|++++++||.+...+..+.+++|+...
T Consensus 5 lDGTLl~---~~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~ 81 (225)
T TIGR01482 5 IDGTLTD---PNRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLE 81 (225)
T ss_pred ccCccCC---CCcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccC
Confidence 4666642 1224778899999999999999999999999999999999986431
Q ss_pred -------------------------------------------------ce-------ehccCh--hhHHHHHHHHhhC-
Q 038599 275 -------------------------------------------------MV-------YAELLP--QHKEELVELLKKD- 295 (473)
Q Consensus 275 -------------------------------------------------~v-------~a~~~P--~~K~~~v~~l~~~- 295 (473)
.+ +.+..| .+|...++.+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~ 161 (225)
T TIGR01482 82 EEWFLDIVIAKTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKL 161 (225)
T ss_pred HHHHHHHHHhcccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHh
Confidence 00 001112 3777777777554
Q ss_pred C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCccc----HHHHHH
Q 038599 296 G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRK----IPKAIK 349 (473)
Q Consensus 296 g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~----l~~~i~ 349 (473)
| .++++||+.||.+|++.|++|++|+ ++.+..++.||.|..+++-.+ +...++
T Consensus 162 ~i~~~~~i~~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 162 GIKPGETLVCGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred CCCHHHEEEECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 3 6999999999999999999999998 899999999999998777777 555543
No 52
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.78 E-value=3e-08 Score=86.90 Aligned_cols=114 Identities=22% Similarity=0.299 Sum_probs=95.8
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHH
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-G----ATAMVGDGINDAPALAA 313 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~ 313 (473)
-.|+.|.+.|+++.++||.+...++.-++++||. .+|-.. ++|....+.|.++ + .|+++||..||.|+|+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG~--~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQGI--SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeech--HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 5789999999999999999999999999999998 777654 5899888887755 2 79999999999999999
Q ss_pred CCeeEEeCCCCCccccccccEEEecCC----cccHHHHHHHHHHHHHH
Q 038599 314 VDIGISMGISGSALAMESGHVILMSND----IRKIPKAIKLARKASTK 357 (473)
Q Consensus 314 AdvgIa~g~~~~~~a~~~ad~vl~~~~----l~~l~~~i~~~r~~~~~ 357 (473)
.++++++. .+.+..++.+|+|+.... ++.+.+++..++..+..
T Consensus 118 vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~ 164 (170)
T COG1778 118 VGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDE 164 (170)
T ss_pred cCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHH
Confidence 99999996 788888899999997654 55566666666655443
No 53
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.76 E-value=1.3e-08 Score=92.06 Aligned_cols=91 Identities=27% Similarity=0.411 Sum_probs=79.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC-------------------hhhHHHHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL-------------------PQHKEELVEL 291 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~-------------------P~~K~~~v~~ 291 (473)
-.+-|+++|.+..||++|.+++++||--..-+..++.++||+..++||+.. ...|.++|+.
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 346789999999999999999999999999999999999999776777753 3589999999
Q ss_pred HhhCC---cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 292 LKKDG---ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 292 l~~~g---~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
+++.- .++|||||.||.+|+..||.=|+.+
T Consensus 167 lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 167 LRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 98852 6899999999999999977766653
No 54
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.71 E-value=7.2e-08 Score=92.42 Aligned_cols=125 Identities=23% Similarity=0.261 Sum_probs=99.5
Q ss_pred eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc------------------------
Q 038599 219 LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------ 274 (473)
Q Consensus 219 ~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------ 274 (473)
.||+++. -...+.+++.+++++|+++|+++++.||.+...+..+.+++++...
T Consensus 5 lDGTLl~---~~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~ 81 (254)
T PF08282_consen 5 LDGTLLN---SDGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDS 81 (254)
T ss_dssp CCTTTCS---TTSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-H
T ss_pred ECCceec---CCCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheec
Confidence 4555432 3445778999999999999999999999999999999999998731
Q ss_pred --------------------------------------------------------------------------------
Q 038599 275 -------------------------------------------------------------------------------- 274 (473)
Q Consensus 275 -------------------------------------------------------------------------------- 274 (473)
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~ 161 (254)
T PF08282_consen 82 DDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELK 161 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHH
T ss_pred cchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhc
Confidence
Q ss_pred -------------ceehccCh--hhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccE
Q 038599 275 -------------MVYAELLP--QHKEELVELLKKD----G-ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHV 334 (473)
Q Consensus 275 -------------~v~a~~~P--~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~ 334 (473)
..+-+++| .+|...++.|.+. . .++++||+.||.+||+.++.|++|+ ++.+..+..||.
T Consensus 162 ~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~ 240 (254)
T PF08282_consen 162 KKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADY 240 (254)
T ss_dssp HHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSE
T ss_pred cccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCE
Confidence 01111222 4899888888753 2 7999999999999999999999998 999999999999
Q ss_pred EEecCCcccHHHH
Q 038599 335 ILMSNDIRKIPKA 347 (473)
Q Consensus 335 vl~~~~l~~l~~~ 347 (473)
++.+.+=.++.++
T Consensus 241 i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 241 ITPSNNDDGVAKA 253 (254)
T ss_dssp EESSGTCTHHHHH
T ss_pred EecCCCCChHHHh
Confidence 9977665666654
No 55
>PLN02887 hydrolase family protein
Probab=98.68 E-value=1.3e-07 Score=101.75 Aligned_cols=52 Identities=29% Similarity=0.436 Sum_probs=48.3
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
.|+.+|||.||.+||+.|+.|+||| ++.+..++.||+|..+++-.++..+++
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5999999999999999999999999 999999999999998888888887775
No 56
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.66 E-value=1.2e-07 Score=88.41 Aligned_cols=98 Identities=33% Similarity=0.422 Sum_probs=77.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------------cChhhHHHHHHHHhh
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------------LLPQHKEELVELLKK 294 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------------~~P~~K~~~v~~l~~ 294 (473)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+. .+++. ..|..|...++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 57999999999999999999999999999999999999986 44321 124567777776644
Q ss_pred C-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccc
Q 038599 295 D-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESG 332 (473)
Q Consensus 295 ~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~a 332 (473)
+ | .+.|+||+.||.++++.|+++++++ ......+.+.
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~ 199 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAK 199 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhcc
Confidence 3 3 5999999999999999999999996 3333333333
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.60 E-value=2e-07 Score=90.82 Aligned_cols=128 Identities=22% Similarity=0.306 Sum_probs=96.7
Q ss_pred EeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------------------
Q 038599 216 YVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------------------- 274 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------------------- 274 (473)
+.-.||+++- -...+.+++.++|++|+++|++++++||++...+..+.+++|+...
T Consensus 3 ~~DlDGTLl~---~~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~ 79 (256)
T TIGR00099 3 FIDLDGTLLN---DDHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKP 79 (256)
T ss_pred EEeCCCCCCC---CCCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecC
Confidence 3445777753 1234778999999999999999999999999999999999998732
Q ss_pred --------------------------cee---------------------------------------------------
Q 038599 275 --------------------------MVY--------------------------------------------------- 277 (473)
Q Consensus 275 --------------------------~v~--------------------------------------------------- 277 (473)
.++
T Consensus 80 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (256)
T TIGR00099 80 LDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIE 159 (256)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHH
Confidence 000
Q ss_pred --------------------hccCh--hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCccccc
Q 038599 278 --------------------AELLP--QHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAME 330 (473)
Q Consensus 278 --------------------a~~~P--~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~ 330 (473)
-+..| ..|..-++.+.+. | .++++||+.||.+|++.|++|++|+ ++.+..++
T Consensus 160 ~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~ 238 (256)
T TIGR00099 160 ALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKA 238 (256)
T ss_pred HhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHH
Confidence 00011 1455555555443 2 6999999999999999999999998 88888999
Q ss_pred cccEEEecCCcccHHHH
Q 038599 331 SGHVILMSNDIRKIPKA 347 (473)
Q Consensus 331 ~ad~vl~~~~l~~l~~~ 347 (473)
.||+++.+++-.++..+
T Consensus 239 ~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 239 LADYVTDSNNEDGVALA 255 (256)
T ss_pred hCCEEecCCCCcchhhh
Confidence 99999987777776653
No 58
>PLN02954 phosphoserine phosphatase
Probab=98.59 E-value=3.4e-07 Score=87.15 Aligned_cols=114 Identities=21% Similarity=0.301 Sum_probs=85.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-------------------cChhhHHHHHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-------------------LLPQHKEELVELL 292 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-------------------~~P~~K~~~v~~l 292 (473)
.++|++.+.++.|+++|+++.++||.....+..+.+.+|+....+++. .....|...++.+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~ 163 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHI 163 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHH
Confidence 478999999999999999999999999999999999999974334431 0124588888877
Q ss_pred hhC-C--cEEEEcCCcccHHHHHH--CCeeEEeCCCC-CccccccccEEEecCCcccHHHH
Q 038599 293 KKD-G--ATAMVGDGINDAPALAA--VDIGISMGISG-SALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 293 ~~~-g--~v~mvGDG~ND~~al~~--AdvgIa~g~~~-~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
.++ | .+.|+||+.||..+.++ ++++++.|... .+.....+|.++ +++..+..+
T Consensus 164 ~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~~ 222 (224)
T PLN02954 164 KKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIEV 222 (224)
T ss_pred HHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHHh
Confidence 654 3 79999999999999777 56666655221 122344688888 566666543
No 59
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.50 E-value=1.2e-06 Score=83.55 Aligned_cols=118 Identities=24% Similarity=0.271 Sum_probs=92.2
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceeh-------ccChhhHHHHHHHHhhCC-cEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYA-------ELLPQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a-------~~~P~~K~~~v~~l~~~g-~v~ 299 (473)
...+-|+++++++.|+++|++..++|+++...+..+.++.|+..- .+++ ...|+.....++.+.... .++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 456789999999999999999999999999999999999998732 1222 123556666666666554 699
Q ss_pred EEcCCcccHHHHHHCC---eeEEeCCC-CCccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGINDAPALAAVD---IGISMGIS-GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~ND~~al~~Ad---vgIa~g~~-~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||||..+|..|-++|+ +|+..|.. ........+|+++ +++..+...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 67777742 3455666799999 77877776553
No 60
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.47 E-value=3.8e-07 Score=84.33 Aligned_cols=78 Identities=31% Similarity=0.378 Sum_probs=64.8
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc-------------Chh-h--HHHHHHHH------
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL-------------LPQ-H--KEELVELL------ 292 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~-------------~P~-~--K~~~v~~l------ 292 (473)
+++.+.|+.++++|++++++||+....+..+++.+|++...+++.- +|. + |.+.++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 7777999999999999999999999999999999999864333322 222 3 99999999
Q ss_pred hhCC-cEEEEcCCcccHHHHH
Q 038599 293 KKDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 293 ~~~g-~v~mvGDG~ND~~al~ 312 (473)
+... .+.++|||.||.++|+
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 2333 8999999999999986
No 61
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.46 E-value=9.2e-07 Score=83.90 Aligned_cols=90 Identities=19% Similarity=0.300 Sum_probs=74.0
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-c----------Ch------------hhHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-L----------LP------------QHKEE 287 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-~----------~P------------~~K~~ 287 (473)
.+++|++.+.++.|++.|+++.++||........+.+.++.. ..++++ + .| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 468999999999999999999999999999999888887543 234331 1 12 24899
Q ss_pred HHHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 288 LVELLKKDG-ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 288 ~v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
+++.++... .+.|+|||.||..+++.||+.++-+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 999988766 8999999999999999999988753
No 62
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.40 E-value=9.1e-07 Score=80.79 Aligned_cols=80 Identities=29% Similarity=0.326 Sum_probs=67.8
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-------------------ccChhhHHHHHHHHh
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-------------------ELLPQHKEELVELLK 293 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-------------------~~~P~~K~~~v~~l~ 293 (473)
++|++.+.++.+++.|++++++||.....+..+++.+|+. .+++ ...+..|...++.++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~--~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID--DVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc--hheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 5899999999999999999999999999999999999987 3322 223578999999876
Q ss_pred hC----C-cEEEEcCCcccHHHHHHC
Q 038599 294 KD----G-ATAMVGDGINDAPALAAV 314 (473)
Q Consensus 294 ~~----g-~v~mvGDG~ND~~al~~A 314 (473)
++ . .+.|+|||.||.++++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 54 2 699999999999999865
No 63
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.39 E-value=4.2e-06 Score=82.37 Aligned_cols=59 Identities=14% Similarity=0.048 Sum_probs=48.5
Q ss_pred CceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 211 GKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 211 G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
..+.++.-.||+++- =...+.+.++++|++|+++|+++++.||.....+..+.+++|++
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 356677778888863 12234567899999999999999999999999999999999985
No 64
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.39 E-value=1.2e-06 Score=83.34 Aligned_cols=88 Identities=20% Similarity=0.260 Sum_probs=73.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc---cC----------h----------hhHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE---LL----------P----------QHKEEL 288 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~---~~----------P----------~~K~~~ 288 (473)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +..+.++++ .+ | ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 67999999999999999999999999999999999988 654345432 11 1 248899
Q ss_pred HHHHhhCC-cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 289 VELLKKDG-ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 289 v~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
++.++... .+.|+|||.||..|.++||+.++-
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 99888775 899999999999999999997663
No 65
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.38 E-value=3.2e-06 Score=80.37 Aligned_cols=119 Identities=20% Similarity=0.227 Sum_probs=85.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-----cCh--hhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-----LLP--QHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-----~~P--~~K~~~v~~l~~~g-~v~m 300 (473)
..+.|++.+.++.|++.|+++.++||........+.+++|+.. +.+++. ..| +--..+++.++... .++|
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 5688999999999999999999999999999999999999862 122211 122 22234444454443 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEeC--CC-CCccccccccEEEecCCcccHHHHHHHH
Q 038599 301 VGDGINDAPALAAVDI-GISMG--IS-GSALAMESGHVILMSNDIRKIPKAIKLA 351 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~g--~~-~~~~a~~~ad~vl~~~~l~~l~~~i~~~ 351 (473)
+||+.||..+.+.+++ +|.+. .. ..+.....++.++ +++..+...+.++
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999999 55543 11 1233345688888 8888888877543
No 66
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.34 E-value=6.2e-06 Score=81.24 Aligned_cols=57 Identities=19% Similarity=0.117 Sum_probs=47.5
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.++.-.||+++. -.+.+.++++++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 5 kli~~DlDGTLl~---~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 5 LLVFTDLDGTLLD---HHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred eEEEEcCcccCcC---CCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4566667888763 13456788999999999999999999999999999999999875
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.34 E-value=1.5e-06 Score=80.06 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=73.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceehc---------------------c--ChhhH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYAE---------------------L--LPQHK 285 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a~---------------------~--~P~~K 285 (473)
-+++|++.+.++.|++.|+++.++|+.+......+.+..|+..- .+++. . ....|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999998631 23321 0 11259
Q ss_pred HHHHHHHhhC-C-cEEEEcCCcccHHHHHHCCeeEE
Q 038599 286 EELVELLKKD-G-ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 286 ~~~v~~l~~~-g-~v~mvGDG~ND~~al~~AdvgIa 319 (473)
.++++.++++ . .+.|+|||.||..|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 9999999886 5 89999999999999999987554
No 68
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.28 E-value=2.4e-06 Score=79.89 Aligned_cols=90 Identities=16% Similarity=0.073 Sum_probs=75.5
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc------------------cChhhHHHHHHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE------------------LLPQHKEELVEL 291 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~------------------~~P~~K~~~v~~ 291 (473)
...++|++.+.++.+++.|++++++|+.....+..+++++|++ .+++. ..+++|...++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~--~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID--NAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc--ceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 4568999999999999999999999999999999999999997 34322 224678888877
Q ss_pred HhhC-C----cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 292 LKKD-G----ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 292 l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
+.++ + .+.++||+.+|.++++.|+.++.++
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 6533 3 5899999999999999999999885
No 69
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.26 E-value=7.8e-06 Score=76.77 Aligned_cols=116 Identities=21% Similarity=0.224 Sum_probs=81.5
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-----c--ChhhHHHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-----L--LPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-----~--~P~~K~~~v~~l~~~g-~v~m 300 (473)
-++.|++.+.+++|++.|+++.++|+.+...+....+.+|+.. +.+++. . .|+--..+++.++-.. .++|
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~ 153 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVM 153 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEE
Confidence 3678999999999999999999999999999999999999862 222221 1 2222233333343333 6999
Q ss_pred EcCCcccHHHHHHCCee---EEeCC-CCCccccccccEEEecCCcccHHHHH
Q 038599 301 VGDGINDAPALAAVDIG---ISMGI-SGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 301 vGDG~ND~~al~~Advg---Ia~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|||+.+|..+.+++++. +..|. +..+.....+|+++ +++..+..++
T Consensus 154 igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 154 VGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred EcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 99999999999999984 33331 12234456788887 6676665543
No 70
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.25 E-value=1e-05 Score=78.82 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=43.2
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeCCCCC---cccccc--c-cEEEecCCcccHHHHHH
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMGISGS---ALAMES--G-HVILMSNDIRKIPKAIK 349 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g~~~~---~~a~~~--a-d~vl~~~~l~~l~~~i~ 349 (473)
.++++||+.||.+|++.|+.|++|+ ++. +..++. | ++|..+++-.++.++++
T Consensus 196 ~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 196 KVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred eEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 5999999999999999999999998 665 356765 4 58887888888887765
No 71
>PRK08238 hypothetical protein; Validated
Probab=98.19 E-value=5.1e-05 Score=80.40 Aligned_cols=89 Identities=18% Similarity=0.170 Sum_probs=73.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceeh-----ccChhhHHHHHHHHhhCCcEEEEcCCcc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYA-----ELLPQHKEELVELLKKDGATAMVGDGIN 306 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-----~~~P~~K~~~v~~l~~~g~v~mvGDG~N 306 (473)
+.+|++.+.+++++++|+++.++|+-+...++.+++++|+-. .+.+ +..|+.|.+.+++...++...|+||..+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~~~~~yvGDS~~ 150 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGERGFDYAGNSAA 150 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCccCeeEecCCHH
Confidence 478999999999999999999999999999999999999722 3332 3467778777664433334788999999
Q ss_pred cHHHHHHCCeeEEeC
Q 038599 307 DAPALAAVDIGISMG 321 (473)
Q Consensus 307 D~~al~~AdvgIa~g 321 (473)
|.++++.|+-.++++
T Consensus 151 Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 151 DLPVWAAARRAIVVG 165 (479)
T ss_pred HHHHHHhCCCeEEEC
Confidence 999999999999996
No 72
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.18 E-value=1.2e-05 Score=76.06 Aligned_cols=115 Identities=21% Similarity=0.216 Sum_probs=81.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|+++|+++.++|+.....+..+.+..|+.. +.+++ + ..|+--.++++.+.... .++||
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 161 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMV 161 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEE
Confidence 367999999999999999999999999999999999999973 11221 1 12333334444444333 79999
Q ss_pred cCCcccHHHHHHCCe---eEEeCCCCC-ccccccccEEEecCCcccHHHHH
Q 038599 302 GDGINDAPALAAVDI---GISMGISGS-ALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 302 GDG~ND~~al~~Adv---gIa~g~~~~-~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
||+.+|..+.++|++ ++..|.... +.....+|.++ +++..+..++
T Consensus 162 GDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 162 GDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 999999999999998 333331112 22344688887 6787777654
No 73
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.10 E-value=2.1e-05 Score=67.38 Aligned_cols=87 Identities=30% Similarity=0.332 Sum_probs=66.2
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--ccceeh-----------------------ccChh
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--FDMVYA-----------------------ELLPQ 283 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~--~~~v~a-----------------------~~~P~ 283 (473)
...++++++.+.+++|+++|++++++||.....+..+.++.|+. .+.++. ...|+
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34588999999999999999999999999999999999999973 222222 22334
Q ss_pred hHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCC
Q 038599 284 HKEELVELLKKDG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 284 ~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Ad 315 (473)
.+..+.+.+.... .+.|+||+.+|..+++.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcC
Confidence 4444444444433 7999999999999999843
No 74
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.09 E-value=2.1e-05 Score=74.10 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=77.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-----cCh--hhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-----LLP--QHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-----~~P--~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|++.|+++.++|+.+...+..+.++.|+.. +.+++. ..| +-=....+.+.... .++|+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 578999999999999999999999999999999999999852 122221 112 21223333333323 69999
Q ss_pred cCCcccHHHHHHCCeeEE-e--CCCCC-ccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIGIS-M--GISGS-ALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa-~--g~~~~-~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||..+|..+.++|++-.. + |.... +.....+|.++ +++..+..
T Consensus 165 gDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 165 GDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred CCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 999999999999998433 3 31111 22234688877 66666544
No 75
>PRK06769 hypothetical protein; Validated
Probab=98.08 E-value=2.8e-05 Score=71.28 Aligned_cols=106 Identities=16% Similarity=0.085 Sum_probs=74.4
Q ss_pred CCceeeEeeeCCeEEEEEEecC----ccCCchHHHHHHHHhCCCeEEEEcCCCHH--------HHHHHHHHcCCCcccee
Q 038599 210 GGKTRGYVYLGATPVGTFSLSD----SCRSGALEAIKDLKSLGIKSFILAGDSHA--------AALYAQDQLDHAFDMVY 277 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d----~lr~~a~~~I~~L~~~gi~v~mlTGD~~~--------~a~~~a~~~gi~~~~v~ 277 (473)
.|++++.+-+|+++.|--.+.+ ++.|++++++++|++.|+++.++|+.... ......+..|+. .++
T Consensus 2 ~~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~ 79 (173)
T PRK06769 2 TNIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIY 79 (173)
T ss_pred CCCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEE
Confidence 3688899999998876533222 26899999999999999999999987631 233445677876 433
Q ss_pred h------------ccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee
Q 038599 278 A------------ELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 278 a------------~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg 317 (473)
- ...|+-=..+++.+.... .+.||||..+|..+-++|++-
T Consensus 80 ~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 80 LCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred ECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 1 112222244444444333 799999999999999999983
No 76
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.08 E-value=1.2e-05 Score=77.44 Aligned_cols=65 Identities=20% Similarity=0.231 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcccccccc----EEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSALAMESGH----VILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad----~vl~~~~l~~l~~~i~ 349 (473)
.|...++.|.++ | .++++||+.||.+|++.++.|++|+ ++.+..++.|+ ++...++-.++.+.++
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777776543 3 6999999999999999999999998 88888889999 7766666667777664
No 77
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.03 E-value=4e-05 Score=75.52 Aligned_cols=117 Identities=21% Similarity=0.320 Sum_probs=80.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccChhhH--HHHH----HHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELLPQHK--EELV----ELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~P~~K--~~~v----~~l~~~g-~v~m 300 (473)
.++.|++.++++.|++.|+++.++|+.+...+..+.++.|+.. +.++ ++-.+..| ...+ +.+.-.. .++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 4678999999999999999999999999998998989999862 1122 22222222 2233 3332223 7999
Q ss_pred EcCCcccHHHHHHCCe-eEEe--CCC-CCccccccccEEEecCCcccHHHHHH
Q 038599 301 VGDGINDAPALAAVDI-GISM--GIS-GSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~--g~~-~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||+.||..+.+.|++ .+.+ |.. ..+.....+|.++ +++..+.+++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3333 311 1223345788888 67777776544
No 78
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=8e-05 Score=73.41 Aligned_cols=113 Identities=17% Similarity=0.161 Sum_probs=80.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--cee-hccChhhHHHHHHH-HhhC---C-cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVY-AELLPQHKEELVEL-LKKD---G-ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~-a~~~P~~K~~~v~~-l~~~---g-~v~mvGD 303 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+-+..|+... .+. ++..+ .|...++. +++. . .++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 5689999999999999999999999999999999999998621 111 11111 23333332 2322 2 6999999
Q ss_pred CcccHHHHHHCCee---EEeCCCCCc--cccccccEEEecCCcccHHHHH
Q 038599 304 GINDAPALAAVDIG---ISMGISGSA--LAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 304 G~ND~~al~~Advg---Ia~g~~~~~--~a~~~ad~vl~~~~l~~l~~~i 348 (473)
+.+|..+.++|++- +..| .... .....+|+++ +++..+.+++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g-~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWG-FNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecC-CCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999983 2233 1121 2234689888 7788887755
No 79
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.94 E-value=4.5e-05 Score=72.54 Aligned_cols=110 Identities=15% Similarity=0.109 Sum_probs=76.1
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc---------ChhhHHHHHHHHhhCC----c
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL---------LPQHKEELVELLKKDG----A 297 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~---------~P~~K~~~v~~l~~~g----~ 297 (473)
-++.|++.++++.|++.|+++.++|+........+.+++|+. .+|... .|... -+.+.+++.| .
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~--~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~ 167 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR--DYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLT 167 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch--hcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHH
Confidence 467899999999999999999999999999999999999986 333221 22221 2233333333 6
Q ss_pred EEEEcCCcccHHHHHHCCeeEEeCCCCC---ccccccccEEEecCCcccHH
Q 038599 298 TAMVGDGINDAPALAAVDIGISMGISGS---ALAMESGHVILMSNDIRKIP 345 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgIa~g~~~~---~~a~~~ad~vl~~~~l~~l~ 345 (473)
++|+||..||..+.+.|++....-..+. +.-...+|.++ .++..+.
T Consensus 168 ~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 168 CVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred eEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999998543311221 11223467766 5555543
No 80
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.89 E-value=0.00011 Score=70.53 Aligned_cols=116 Identities=15% Similarity=0.050 Sum_probs=80.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+-++.|+... .+.+ + ..|+-=..+++.+.-.. .++||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 5789999999999999999999999999888888888998631 1211 1 12333344445554433 79999
Q ss_pred cCCcccHHHHHHCCee---EEeCCCCC--ccccccccEEEecCCcccHHHHHH
Q 038599 302 GDGINDAPALAAVDIG---ISMGISGS--ALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 302 GDG~ND~~al~~Advg---Ia~g~~~~--~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||+.+|..+.+.|++. +..|.... ......+|+++ +++..+.+.+.
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~~ 225 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPAT 225 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHhc
Confidence 9999999999999984 33331111 12234588888 66766665543
No 81
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.85 E-value=7.4e-05 Score=73.40 Aligned_cols=131 Identities=15% Similarity=0.199 Sum_probs=91.2
Q ss_pred ceeeEeeeCCeEEEEEEe--cCccCCchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------
Q 038599 212 KTRGYVYLGATPVGTFSL--SDSCRSGALEAIKDLKS-LGIKSFILAGDSHAAALYAQDQLDHAFD-------------- 274 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l--~d~lr~~a~~~I~~L~~-~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------- 274 (473)
.+.+++-.||+++-...= .-.+-++++++|++|++ .|+.++++||.+......+.+.+++..-
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 356777789988642100 11455789999999998 7999999999999999888776664210
Q ss_pred ---------------------------------------------------------------------ceehccCh--h
Q 038599 275 ---------------------------------------------------------------------MVYAELLP--Q 283 (473)
Q Consensus 275 ---------------------------------------------------------------------~v~a~~~P--~ 283 (473)
..+-++.| .
T Consensus 94 ~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~ 173 (266)
T PRK10187 94 HIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGT 173 (266)
T ss_pred eeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCC
Confidence 00011112 2
Q ss_pred hHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHC----CeeEEeCCCCCccccccccEEEecCCcccHHHHHH
Q 038599 284 HKEELVELLKKD-G----ATAMVGDGINDAPALAAV----DIGISMGISGSALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 284 ~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~A----dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
+|...++.+.++ | .++++||+.||.+|++.+ +.||+|| ++. ..|++.+ ++...+...+.
T Consensus 174 ~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l--~~~~~v~~~L~ 241 (266)
T PRK10187 174 NKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRL--AGVPDVWSWLE 241 (266)
T ss_pred CHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeC--CCHHHHHHHHH
Confidence 677777765544 2 589999999999999999 9999998 543 4477777 56776666554
No 82
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.83 E-value=7e-05 Score=72.67 Aligned_cols=131 Identities=18% Similarity=0.092 Sum_probs=90.9
Q ss_pred eeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc----------------------
Q 038599 217 VYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---------------------- 274 (473)
Q Consensus 217 va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---------------------- 274 (473)
.-.|++++.--.=..+..|...+.+++++++|+.++++||.+......+.+++++...
T Consensus 6 tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~ 85 (249)
T TIGR01485 6 SDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQH 85 (249)
T ss_pred EcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHH
Confidence 3457777621001345678999999999999999999999999999999988887532
Q ss_pred --------------------------------------------------------------ce---eh-----ccCh--
Q 038599 275 --------------------------------------------------------------MV---YA-----ELLP-- 282 (473)
Q Consensus 275 --------------------------------------------------------------~v---~a-----~~~P-- 282 (473)
.+ .. +..|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~ 165 (249)
T TIGR01485 86 WAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQG 165 (249)
T ss_pred HHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCC
Confidence 00 00 1122
Q ss_pred hhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHH-CCeeEEeCCCCCcccccccc-------EEEecCCcccHHHHH
Q 038599 283 QHKEELVELLKKD-G----ATAMVGDGINDAPALAA-VDIGISMGISGSALAMESGH-------VILMSNDIRKIPKAI 348 (473)
Q Consensus 283 ~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~-AdvgIa~g~~~~~~a~~~ad-------~vl~~~~l~~l~~~i 348 (473)
..|...++.+.+. | .++++||+.||.+|++. ++.|++|+ ++.+..++.++ ++.....-.++.+.+
T Consensus 166 ~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l 243 (249)
T TIGR01485 166 SGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAI 243 (249)
T ss_pred CChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHH
Confidence 3677777777553 2 69999999999999998 67899998 77766665432 444333445555544
No 83
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.75 E-value=0.00021 Score=69.42 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=77.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--c-ceehc------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--D-MVYAE------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~-~v~a~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+-+...+...-+++|+.. + .+.++ ..|+--....+.+.-.. .++||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 568899999999999999999999999999999999999872 1 12222 12333344444444333 69999
Q ss_pred cCCcccHHHHHHCCee---EEeCCCCCccccccccEEEecCCccc
Q 038599 302 GDGINDAPALAAVDIG---ISMGISGSALAMESGHVILMSNDIRK 343 (473)
Q Consensus 302 GDG~ND~~al~~Advg---Ia~g~~~~~~a~~~ad~vl~~~~l~~ 343 (473)
||..+|..+-++|++- +..|....+.....+|+++ +++..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi--~~~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI--KDYED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe--ccchh
Confidence 9999999999999983 3323111222234688888 56665
No 84
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.74 E-value=0.00028 Score=64.95 Aligned_cols=114 Identities=25% Similarity=0.371 Sum_probs=71.5
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCccceeh------------ccChhhH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAFDMVYA------------ELLPQHK 285 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~~~v~a------------~~~P~~K 285 (473)
+.|++.+++++|++.|+++.++|+.+. .....+-+..|+..+.++. ...|+--
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~~ 109 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGML 109 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHHH
Confidence 578999999999999999999998762 1122334556763223331 1123333
Q ss_pred HHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee-EEeCCCCCc---cccccc--cEEEecCCcccHHHHHH
Q 038599 286 EELVELLKKDG-ATAMVGDGINDAPALAAVDIG-ISMGISGSA---LAMESG--HVILMSNDIRKIPKAIK 349 (473)
Q Consensus 286 ~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg-Ia~g~~~~~---~a~~~a--d~vl~~~~l~~l~~~i~ 349 (473)
...++.+.-.. .++||||..+|..+.+.|++. |.+. .+.. .....+ |+++ +++..+.+++.
T Consensus 110 ~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii--~~l~el~~~l~ 177 (181)
T PRK08942 110 LSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVL--DSLADLPQALK 177 (181)
T ss_pred HHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceee--cCHHHHHHHHH
Confidence 44444444333 799999999999999999973 2232 2221 122234 7777 66777666554
No 85
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.72 E-value=0.00017 Score=70.14 Aligned_cols=85 Identities=20% Similarity=0.077 Sum_probs=63.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---cceeh-c------cChhhHHHHHHHHhhC-C-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVYA-E------LLPQHKEELVELLKKD-G-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~a-~------~~P~~K~~~v~~l~~~-g-~v~ 299 (473)
++.|++.+.++.|+++|+++.++|+.....+..+-+++|+.. +.+++ + ..|+-=...++.+.-. . .++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l 178 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACV 178 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheE
Confidence 468999999999999999999999999999999888888752 12221 1 1233333334444422 2 599
Q ss_pred EEcCCcccHHHHHHCCe
Q 038599 300 MVGDGINDAPALAAVDI 316 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv 316 (473)
||||..+|..+-+.|++
T Consensus 179 ~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 179 KVGDTVPDIEEGRNAGM 195 (253)
T ss_pred EECCcHHHHHHHHHCCC
Confidence 99999999999999997
No 86
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.71 E-value=0.00025 Score=67.13 Aligned_cols=114 Identities=25% Similarity=0.270 Sum_probs=79.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--c--cceehc-------cChhhHHHHHHHHhhC-C-c
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--F--DMVYAE-------LLPQHKEELVELLKKD-G-A 297 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~--~--~~v~a~-------~~P~~K~~~v~~l~~~-g-~ 297 (473)
.++.||+.+.++.|++.|+++.++|+-.......+.+.+|+. . +.+++. ..|+-=...++.+.-. . .
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 478999999999999999999999999999999999999986 1 222222 1223223333444333 2 6
Q ss_pred EEEEcCCcccHHHHHHCCeeE--EeCCCCC----ccccccccEEEecCCcccHHHH
Q 038599 298 TAMVGDGINDAPALAAVDIGI--SMGISGS----ALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgI--a~g~~~~----~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
++|+||+.+|..+-++|++.. .+. .+. +.....++.++ +++..+..+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 999999999999999999975 232 222 12233577777 666666554
No 87
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.64 E-value=0.00013 Score=70.28 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=62.2
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCc--cceehccC-hhhHHHHHHHHhhCCcEEEEcCCc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGD----SHAAALYAQDQLDHAF--DMVYAELL-PQHKEELVELLKKDGATAMVGDGI 305 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD----~~~~a~~~a~~~gi~~--~~v~a~~~-P~~K~~~v~~l~~~g~v~mvGDG~ 305 (473)
+.+++++.+++++++|+++.++|+. ...++..+.+.+|++. +.+++.-. +..|......+++.|.++|+||..
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~i~i~vGDs~ 194 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCCCeEEEeCCH
Confidence 3445999999999999999999997 7779999999999973 12222111 111111123456667789999999
Q ss_pred ccHHHHHHCCe
Q 038599 306 NDAPALAAVDI 316 (473)
Q Consensus 306 ND~~al~~Adv 316 (473)
||..+-+.|++
T Consensus 195 ~DI~aAk~AGi 205 (237)
T TIGR01672 195 NDITAAKEAGA 205 (237)
T ss_pred HHHHHHHHCCC
Confidence 99999999987
No 88
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.62 E-value=0.00013 Score=70.28 Aligned_cols=87 Identities=22% Similarity=0.266 Sum_probs=65.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCC----CHHHHHHHHHHcCCCcc----ceehccCh--hhHHHHHHHHhhCCcEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGD----SHAAALYAQDQLDHAFD----MVYAELLP--QHKEELVELLKKDGATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD----~~~~a~~~a~~~gi~~~----~v~a~~~P--~~K~~~v~~l~~~g~v~m 300 (473)
-.+.|++++.++.|+++|+++.++||. ...++..+.+..|++.+ .++..-++ ++|.. .+++.|.++|
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~---~l~~~~i~I~ 189 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQ---WLKKKNIRIF 189 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHH---HHHhcCCeEE
Confidence 346778999999999999999999995 46788999999999422 23332222 34554 4455678999
Q ss_pred EcCCcccHHHHHHCCe-eEEe
Q 038599 301 VGDGINDAPALAAVDI-GISM 320 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~ 320 (473)
+||..+|..+-+.|++ +|..
T Consensus 190 IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 190 YGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred EcCCHHHHHHHHHcCCcEEEE
Confidence 9999999999999998 4443
No 89
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.62 E-value=0.00041 Score=73.59 Aligned_cols=119 Identities=15% Similarity=0.212 Sum_probs=82.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c-cChhhHHHHHH-HHhhCC--cEEEEcCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E-LLPQHKEELVE-LLKKDG--ATAMVGDG 304 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~-~~P~~K~~~v~-~l~~~g--~v~mvGDG 304 (473)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+.. + ..+..|..++. .+++.+ .+.||||.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGDs 409 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGDR 409 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeCC
Confidence 678999999999999999999999999999999999999862 11111 1 11112223333 333333 79999999
Q ss_pred cccHHHHHHCCe-eEEeCC-CCCccccccccEEEecCCcccHHHHHHHHH
Q 038599 305 INDAPALAAVDI-GISMGI-SGSALAMESGHVILMSNDIRKIPKAIKLAR 352 (473)
Q Consensus 305 ~ND~~al~~Adv-gIa~g~-~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r 352 (473)
.+|..+.+.|++ .|.+.. ...+.....+|+++ +++..+.+++...+
T Consensus 410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~~ 457 (459)
T PRK06698 410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTVQ 457 (459)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHHh
Confidence 999999999998 333321 12222234588888 77888777665443
No 90
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.61 E-value=0.00053 Score=59.54 Aligned_cols=103 Identities=20% Similarity=0.232 Sum_probs=71.3
Q ss_pred eeEeeeCCeEEEEEEe-----cCccCCchHHHHHHHHhCCCeEEEEcCCC--------HHHHHHHHHHcCCCccceeh--
Q 038599 214 RGYVYLGATPVGTFSL-----SDSCRSGALEAIKDLKSLGIKSFILAGDS--------HAAALYAQDQLDHAFDMVYA-- 278 (473)
Q Consensus 214 vi~va~d~~~lG~i~l-----~d~lr~~a~~~I~~L~~~gi~v~mlTGD~--------~~~a~~~a~~~gi~~~~v~a-- 278 (473)
.+.+-.|+++..-... +..+.|++.++++.|++.|+++.++|+.. ......+.+++|+....++.
T Consensus 2 ~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 81 (132)
T TIGR01662 2 GVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP 81 (132)
T ss_pred EEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 3455567766631111 23578999999999999999999999988 77788889999986332221
Q ss_pred -ccCh--hhHHHHHHHHh-hCC-cEEEEcC-CcccHHHHHHCCe
Q 038599 279 -ELLP--QHKEELVELLK-KDG-ATAMVGD-GINDAPALAAVDI 316 (473)
Q Consensus 279 -~~~P--~~K~~~v~~l~-~~g-~v~mvGD-G~ND~~al~~Adv 316 (473)
...| +-=..+++.++ -.. .++|||| ..+|..+.+.+++
T Consensus 82 ~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 82 HCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred CCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 1122 22234444452 333 7999999 5999999999887
No 91
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.61 E-value=0.0006 Score=66.72 Aligned_cols=113 Identities=13% Similarity=0.101 Sum_probs=77.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h------ccChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A------ELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a------~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+.+...+..+-+.+|+.. +.++ + ...|+-=...++.+.-.. .++||
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 568999999999999999999999999999999999999862 1121 1 112222233333443333 69999
Q ss_pred cCCcccHHHHHHCCee-EEeCCCCCccccccccEEEecCCcccHHH
Q 038599 302 GDGINDAPALAAVDIG-ISMGISGSALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g~~~~~~a~~~ad~vl~~~~l~~l~~ 346 (473)
||..+|..|-++|++- |++...........+|.++ +++..+..
T Consensus 189 gDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el~~ 232 (260)
T PLN03243 189 GNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDLSV 232 (260)
T ss_pred cCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHHHH
Confidence 9999999999999983 2332122222223578877 56655543
No 92
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.59 E-value=0.0005 Score=67.56 Aligned_cols=57 Identities=16% Similarity=0.036 Sum_probs=47.2
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
++++.-.|++++- -.+..-+.++++|++|+++|+.+++.||........+.+++|+.
T Consensus 2 KLIftDLDGTLLd---~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLD---LEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3556667888753 23456677999999999999999999999999999999999985
No 93
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.56 E-value=0.00066 Score=64.95 Aligned_cols=53 Identities=23% Similarity=0.320 Sum_probs=43.7
Q ss_pred EeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 216 YVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.-.|++++- .+..-+++.++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 3 ~~DlDGTLl~----~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 3 FTDLDGTLLP----PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEeCCCCCcC----CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3445666653 4556678999999999999999999999999999999999974
No 94
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.55 E-value=0.00063 Score=66.69 Aligned_cols=116 Identities=19% Similarity=0.152 Sum_probs=78.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hcc------ChhhHHHHHHHHhhC-C-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AEL------LPQHKEELVELLKKD-G-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~~------~P~~K~~~v~~l~~~-g-~v~ 299 (473)
.+.|++.++++.|++.|+++.++||.....+..+-+..|+.. +.++ ++- .|+-=....+.+.-. . .++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l 180 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACV 180 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceE
Confidence 568999999999999999999999999988887777666431 2222 211 122223334444432 2 589
Q ss_pred EEcCCcccHHHHHHCCe---eEEeCCCC------------------------CccccccccEEEecCCcccHHHHHH
Q 038599 300 MVGDGINDAPALAAVDI---GISMGISG------------------------SALAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv---gIa~g~~~------------------------~~~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
||||..+|..+-+.|++ |+..|... .+.....+|+++ +++..+...+.
T Consensus 181 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi--~~~~~l~~~l~ 255 (267)
T PRK13478 181 KVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAHYVI--DTIADLPAVIA 255 (267)
T ss_pred EEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeeh--hhHHHHHHHHH
Confidence 99999999999999998 44443110 122234578888 77877777653
No 95
>PRK11587 putative phosphatase; Provisional
Probab=97.52 E-value=0.00079 Score=63.86 Aligned_cols=110 Identities=17% Similarity=0.164 Sum_probs=72.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-cee-hc----cCh--hhHHHHHHHHhhCC-cEEEEc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-MVY-AE----LLP--QHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-~v~-a~----~~P--~~K~~~v~~l~~~g-~v~mvG 302 (473)
++.|++.+.++.|+++|+++.++|+.+...+...-+..|+... .+. ++ ..| +-=....+.+.-.. .++|||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 5789999999999999999999999887777776677777421 121 11 122 22222233333223 699999
Q ss_pred CCcccHHHHHHCCe-eEEeCCCCC-ccccccccEEEecCCcccH
Q 038599 303 DGINDAPALAAVDI-GISMGISGS-ALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 303 DG~ND~~al~~Adv-gIa~g~~~~-~~a~~~ad~vl~~~~l~~l 344 (473)
|..+|..+-+.|++ .|.+. .+. ......+|+++ ++++.+
T Consensus 163 Ds~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~--~~~~el 203 (218)
T PRK11587 163 DAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVL--HSLEQL 203 (218)
T ss_pred cchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEe--cchhhe
Confidence 99999999999998 35553 222 22234577776 555443
No 96
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.49 E-value=0.00051 Score=64.03 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=64.4
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------ceehccChhhHHHHHHHHhhCC-cEEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--------MVYAELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--------~v~a~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
.+++.+++.++++.|++.|+++.++||.+...+..+.+++|+..- .+.....|+.-..+++.+.-.. .++|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 345677789999999999999999999999999999999998621 1111233444455555555444 7999
Q ss_pred EcCCcccHHHHHHC
Q 038599 301 VGDGINDAPALAAV 314 (473)
Q Consensus 301 vGDG~ND~~al~~A 314 (473)
|||+.+|..+-++|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999887764
No 97
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.48 E-value=0.00053 Score=67.26 Aligned_cols=118 Identities=19% Similarity=0.234 Sum_probs=79.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehcc-----------C--h----hhHHHHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAEL-----------L--P----QHKEELVEL 291 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~~-----------~--P----~~K~~~v~~ 291 (473)
-++||++.+.++.|++.|+++.++||-....+..+.+++|+.. ..++++. . | ..|.+.+..
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~ 199 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVAL 199 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHH
Confidence 4579999999999999999999999999999999999999842 2232111 1 2 246554432
Q ss_pred -----Hh--hCC-cEEEEcCCcccHHHHHHC---CeeEEeCC--CC----CccccccccEEEecCCcccHHHHH
Q 038599 292 -----LK--KDG-ATAMVGDGINDAPALAAV---DIGISMGI--SG----SALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 292 -----l~--~~g-~v~mvGDG~ND~~al~~A---dvgIa~g~--~~----~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
++ ... .+.++|||.||..|..-. .--+..|- .. -+.-+++=|+|+.++.--.++..+
T Consensus 200 ~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 200 RNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 22 122 799999999999985433 11222221 11 122456889999988766666544
No 98
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.47 E-value=0.00097 Score=60.89 Aligned_cols=106 Identities=16% Similarity=0.087 Sum_probs=76.5
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCccceehccChhh
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQH 284 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~~~P~~ 284 (473)
.+.+.+.+.+.+..|+++.-- =...+.|++.+++++|++.|+++.++|+.+ ...+..+.+.+|+. .+.....|..
T Consensus 19 ~~~~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p 94 (170)
T TIGR01668 19 LLKKVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPG 94 (170)
T ss_pred HHHHCCCCEEEEecCCccccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCCh
Confidence 345677788888888765421 123578999999999999999999999988 67778888899986 3333334432
Q ss_pred HHHHHHHHhhC---C-cEEEEcCCc-ccHHHHHHCCe
Q 038599 285 KEELVELLKKD---G-ATAMVGDGI-NDAPALAAVDI 316 (473)
Q Consensus 285 K~~~v~~l~~~---g-~v~mvGDG~-ND~~al~~Adv 316 (473)
. .+-..+++. . .++||||.. .|..+-+.+++
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 2 222233333 3 699999998 79999999998
No 99
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.45 E-value=0.0017 Score=68.99 Aligned_cols=161 Identities=16% Similarity=0.199 Sum_probs=121.2
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--------------------------
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------------------------- 274 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------------------------- 274 (473)
..|.|++.+.-+.+++....|+.|-++-++.+-.|-.++...+-.|+++||...
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 468999999999999999999999999999999999999999999999999752
Q ss_pred ---------------------------------------------------------------------------ceehc
Q 038599 275 ---------------------------------------------------------------------------MVYAE 279 (473)
Q Consensus 275 ---------------------------------------------------------------------------~v~a~ 279 (473)
-.|.+
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 45888
Q ss_pred cChhhHHHHHHHHhhCC-cEEEEcCCcccHH--HHHHCCeeEEeCCCC------------Cc------------------
Q 038599 280 LLPQHKEELVELLKKDG-ATAMVGDGINDAP--ALAAVDIGISMGISG------------SA------------------ 326 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~--al~~AdvgIa~g~~~------------~~------------------ 326 (473)
.+|+.-.+.|+-+|+.| .++.+|...|-.. -+-+||++|++..-. +.
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 89999999999999999 7888898877432 455789998874110 00
Q ss_pred cccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhhH
Q 038599 327 LAMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTLSV----TVKGAVLVLAVAGYP 381 (473)
Q Consensus 327 ~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~~~----~~n~~~~~la~~g~~ 381 (473)
...-+.|+-+....+-.+..+|.-+|.....+|+.+.|.+ +|.++.++-.++-.|
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP 1113 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLP 1113 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111233333333455677888899999999999988755 444444444444434
No 100
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.45 E-value=0.00084 Score=62.67 Aligned_cols=116 Identities=19% Similarity=0.306 Sum_probs=89.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------------------------------------
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD------------------------------------- 274 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~------------------------------------- 274 (473)
.+-|++.++++.|++. +..+++|---.+-+.++|+.+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876 66777777778889999999999753
Q ss_pred -----ceehccChh---------------hHHHHHHHHhhC-C---cEEEEcCCcccHHHHHHCC----eeEEeCCCCCc
Q 038599 275 -----MVYAELLPQ---------------HKEELVELLKKD-G---ATAMVGDGINDAPALAAVD----IGISMGISGSA 326 (473)
Q Consensus 275 -----~v~a~~~P~---------------~K~~~v~~l~~~-g---~v~mvGDG~ND~~al~~Ad----vgIa~g~~~~~ 326 (473)
.+|.++.|. .|+++++.+.+. + ..++|||.+.|..+|+.+. +.|+. +|.+
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF--NGNe 239 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF--NGNE 239 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe--cCCc
Confidence 567777775 445555544433 2 4689999999999999873 45555 7999
Q ss_pred cccccccEEEecCCcccHHHHHHH
Q 038599 327 LAMESGHVILMSNDIRKIPKAIKL 350 (473)
Q Consensus 327 ~a~~~ad~vl~~~~l~~l~~~i~~ 350 (473)
-+...||+.+.+++...+..++++
T Consensus 240 Yal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred ccccccceEEeccchhhhhHHHHH
Confidence 999999999999988877777653
No 101
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.43 E-value=0.0012 Score=62.49 Aligned_cols=90 Identities=16% Similarity=0.179 Sum_probs=64.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccCh--hhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLP--QHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P--~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+++++|++.|+++.++|+-+........+++|+.. +.++ + ...| +-=....+.+.-.. .++||
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 578999999999999999999999988888888889999862 1121 1 1123 22222333333223 69999
Q ss_pred cCCc-ccHHHHHHCCe-eEEeC
Q 038599 302 GDGI-NDAPALAAVDI-GISMG 321 (473)
Q Consensus 302 GDG~-ND~~al~~Adv-gIa~g 321 (473)
||.. +|..+-++|++ .|.+.
T Consensus 174 gDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 174 GDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred CCChHHHHHHHHHCCCEEEEEC
Confidence 9998 99999999998 44443
No 102
>PLN02382 probable sucrose-phosphatase
Probab=97.42 E-value=0.00082 Score=70.14 Aligned_cols=65 Identities=25% Similarity=0.274 Sum_probs=46.9
Q ss_pred hHHHHHHHHhhC----C----cEEEEcCCcccHHHHHHCC-eeEEeCCCCCccccccc--------cEEEe-cCCcccHH
Q 038599 284 HKEELVELLKKD----G----ATAMVGDGINDAPALAAVD-IGISMGISGSALAMESG--------HVILM-SNDIRKIP 345 (473)
Q Consensus 284 ~K~~~v~~l~~~----g----~v~mvGDG~ND~~al~~Ad-vgIa~g~~~~~~a~~~a--------d~vl~-~~~l~~l~ 345 (473)
.|...++.|.++ | .++.+||+.||.++|+.++ .||+|+ ++.+..++.+ +++.. +.+-.++.
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~ 253 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGII 253 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHH
Confidence 577777777544 3 6899999999999999999 699998 7877666532 45533 23455555
Q ss_pred HHHH
Q 038599 346 KAIK 349 (473)
Q Consensus 346 ~~i~ 349 (473)
++++
T Consensus 254 ~al~ 257 (413)
T PLN02382 254 QAIG 257 (413)
T ss_pred HHHH
Confidence 5553
No 103
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.39 E-value=0.0015 Score=59.93 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=75.2
Q ss_pred eeEeeeCCeEEEEEEe-----cCccCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCc
Q 038599 214 RGYVYLGATPVGTFSL-----SDSCRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAF 273 (473)
Q Consensus 214 vi~va~d~~~lG~i~l-----~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~ 273 (473)
.+++-+|++++.--.. +-.+.|++.+++++|+++|+++.++|.-+. .....+..+.|+..
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL 82 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc
Confidence 4556677776510000 112478999999999999999999997663 11223444555443
Q ss_pred cceeh----------------ccCh--hhHHHHHHHHhhCC-cEEEEcCCcccHHHHHHCCee--EEeCCCCCc---ccc
Q 038599 274 DMVYA----------------ELLP--QHKEELVELLKKDG-ATAMVGDGINDAPALAAVDIG--ISMGISGSA---LAM 329 (473)
Q Consensus 274 ~~v~a----------------~~~P--~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~Advg--Ia~g~~~~~---~a~ 329 (473)
+.++. ...| +-=....+.+.-.. .++||||..+|..+-++|++. |... .+.. ...
T Consensus 83 ~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~ 161 (176)
T TIGR00213 83 DGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAE 161 (176)
T ss_pred cEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCccccccc
Confidence 23321 1122 22222233333223 699999999999999999984 3332 3321 122
Q ss_pred ccccEEEecCCcccHH
Q 038599 330 ESGHVILMSNDIRKIP 345 (473)
Q Consensus 330 ~~ad~vl~~~~l~~l~ 345 (473)
..+|+++ +++..+.
T Consensus 162 ~~ad~~i--~~~~el~ 175 (176)
T TIGR00213 162 NIADWVL--NSLADLP 175 (176)
T ss_pred ccCCEEe--ccHHHhh
Confidence 3488888 5565543
No 104
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.38 E-value=0.0017 Score=66.66 Aligned_cols=111 Identities=13% Similarity=0.153 Sum_probs=77.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
.+.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+.. +.+++ + ..|+-=...++.+.-.. .++||
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~I 295 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVF 295 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 467999999999999999999999999999999999999863 11211 1 12222333444444334 79999
Q ss_pred cCCcccHHHHHHCCee-EEeCCCCCcc-ccccccEEEecCCcccHH
Q 038599 302 GDGINDAPALAAVDIG-ISMGISGSAL-AMESGHVILMSNDIRKIP 345 (473)
Q Consensus 302 GDG~ND~~al~~Advg-Ia~g~~~~~~-a~~~ad~vl~~~~l~~l~ 345 (473)
||..+|..|-+.|++- |.+. .+.+. ....+|+++ +++..+.
T Consensus 296 GDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI--~s~~EL~ 338 (381)
T PLN02575 296 GNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVV--RRLDELS 338 (381)
T ss_pred cCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEE--CCHHHHH
Confidence 9999999999999983 3332 22211 123478877 6666553
No 105
>PRK11590 hypothetical protein; Provisional
Probab=97.35 E-value=0.0013 Score=62.09 Aligned_cols=89 Identities=12% Similarity=0.040 Sum_probs=71.1
Q ss_pred ccCCchHHHH-HHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---Ccccee-------------hccChhhHHHHHHHH-h
Q 038599 232 SCRSGALEAI-KDLKSLGIKSFILAGDSHAAALYAQDQLDH---AFDMVY-------------AELLPQHKEELVELL-K 293 (473)
Q Consensus 232 ~lr~~a~~~I-~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi---~~~~v~-------------a~~~P~~K~~~v~~l-~ 293 (473)
.++|++.+.| +.+++.|++++++|+-...-+..+++.+|+ + ..+. .++..++|.+.++.. .
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 4589999999 578889999999999999999999999995 3 1111 113357999888865 3
Q ss_pred hCC-cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 294 KDG-ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 294 ~~g-~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
... ...+-||..||.|+|+.|+..++++
T Consensus 174 ~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 174 TPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred CCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 223 5568899999999999999999995
No 106
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=97.34 E-value=0.0013 Score=58.73 Aligned_cols=108 Identities=19% Similarity=0.203 Sum_probs=86.6
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChh
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQ 283 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~ 283 (473)
.+.+.++|.+.+.+-.|.+++..= ....-|+.++=+.+++++|+++.++|..++..+..+++.+|++ .++....|-
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~ 95 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPF 95 (175)
T ss_pred HHHHHHcCCcEEEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCcc
Confidence 467788999999998899887632 2335677888889999999999999999999999999999998 888877886
Q ss_pred hHHHHHHHHhhCC----cEEEEcCC-cccHHHHHHCCe
Q 038599 284 HKEELVELLKKDG----ATAMVGDG-INDAPALAAVDI 316 (473)
Q Consensus 284 ~K~~~v~~l~~~g----~v~mvGDG-~ND~~al~~Adv 316 (473)
.+ .+-+++++.+ .|+||||. ..|+.+-..+++
T Consensus 96 ~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 96 GR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred HH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 65 4555666553 79999998 578877776666
No 107
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.31 E-value=0.0018 Score=61.25 Aligned_cols=90 Identities=13% Similarity=0.058 Sum_probs=70.4
Q ss_pred ccCCchHHHHH-HHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc-ccee--------------hccChhhHHHHHHHHhhC
Q 038599 232 SCRSGALEAIK-DLKSLGIKSFILAGDSHAAALYAQDQLDHAF-DMVY--------------AELLPQHKEELVELLKKD 295 (473)
Q Consensus 232 ~lr~~a~~~I~-~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~-~~v~--------------a~~~P~~K~~~v~~l~~~ 295 (473)
.++|++.+.|+ .+++.|++++++|+-....++.+++..++.. +++. .++--++|.+.++..-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~~ 173 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIGS 173 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhCC
Confidence 46999999995 7898999999999999999999998855411 1111 113357999888765322
Q ss_pred C--cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 296 G--ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 296 g--~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
. ...+-||+.||.|+|+.||..++++
T Consensus 174 ~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 174 PLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 2 5678899999999999999999995
No 108
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.28 E-value=0.0015 Score=71.11 Aligned_cols=57 Identities=18% Similarity=0.135 Sum_probs=45.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+.++.-.|++++.- .+..-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 417 KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 417 KIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred eEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 56666778887531 2224457899999999999999999999999999999999864
No 109
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.26 E-value=0.0013 Score=62.44 Aligned_cols=52 Identities=23% Similarity=0.203 Sum_probs=40.5
Q ss_pred eeeCCeEEEEEEecCc-cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 217 VYLGATPVGTFSLSDS-CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 217 va~d~~~lG~i~l~d~-lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.-.||+++. .+. ..+.++++|++|+++|++++++||.+...+..+.+++|+.
T Consensus 4 ~DlDGTLL~----~~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 4 SDLDGTLLD----SHSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EeCCCCCcC----CCCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 335666642 222 3345889999999999999999999999999999999876
No 110
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.26 E-value=0.0017 Score=61.96 Aligned_cols=87 Identities=16% Similarity=0.223 Sum_probs=63.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hccC--hhhHHHHHHH-HhhCC----cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AELL--PQHKEELVEL-LKKDG----ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~~~--P~~K~~~v~~-l~~~g----~v~m 300 (473)
-.+.|++.+.++.|+++|+++.++|+-+...+...-+..|+.. +.++ ++-. +..+.++.+. +++.| .++|
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 171 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLF 171 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEE
Confidence 3578999999999999999999999988888888888888752 1222 1111 1112223332 33333 6999
Q ss_pred EcCCcccHHHHHHCCee
Q 038599 301 VGDGINDAPALAAVDIG 317 (473)
Q Consensus 301 vGDG~ND~~al~~Advg 317 (473)
|||..+|..+-++|++.
T Consensus 172 igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 172 IDDSEPILDAAAQFGIR 188 (224)
T ss_pred EcCCHHHHHHHHHcCCe
Confidence 99999999999999995
No 111
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.23 E-value=0.001 Score=66.32 Aligned_cols=90 Identities=13% Similarity=0.011 Sum_probs=72.1
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ce--------------ehccChhhHHHHHHH
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MV--------------YAELLPQHKEELVEL 291 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v--------------~a~~~P~~K~~~v~~ 291 (473)
..+++.|++.+++++|++.|++++++||.+...+..+.+.+|+... .+ .....|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 5688999999999999999999999999999999999998887630 00 113345667777776
Q ss_pred HhhC--CcEEEEcCCcccHHHHHHCCeeE
Q 038599 292 LKKD--GATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 292 l~~~--g~v~mvGDG~ND~~al~~AdvgI 318 (473)
+... ..++||||..+|+.+.+.|++-.
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 5442 37999999999999999999853
No 112
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.22 E-value=0.0018 Score=60.30 Aligned_cols=86 Identities=17% Similarity=0.101 Sum_probs=63.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccChhhH--HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLPQHK--EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P~~K--~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+++++|++.|+++.++|+-+........+++|+.. +.++ + ...|... ..+.+.+.-.. .++||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v 171 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV 171 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE
Confidence 468999999999999999999999999888889999999851 1222 1 1223211 23333333333 69999
Q ss_pred cCCcccHHHHHHCCee
Q 038599 302 GDGINDAPALAAVDIG 317 (473)
Q Consensus 302 GDG~ND~~al~~Advg 317 (473)
||+.+|..+-+++++-
T Consensus 172 gD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 172 ASNPWDLGGAKKFGFK 187 (198)
T ss_pred eCCHHHHHHHHHCCCc
Confidence 9999999999999884
No 113
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.22 E-value=0.0021 Score=63.87 Aligned_cols=112 Identities=18% Similarity=0.201 Sum_probs=72.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC---Ccc-cee-hc----cCh--hhHHHHHHHHhhCC-cEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDH---AFD-MVY-AE----LLP--QHKEELVELLKKDG-ATA 299 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi---~~~-~v~-a~----~~P--~~K~~~v~~l~~~g-~v~ 299 (473)
++.|++.+.++.|++.|+++.++|+-+......+-+..+. ... .++ +. ..| +-=..+++.+.-.. .++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 5789999999999999999999999888877766665531 110 121 11 122 22233344444333 699
Q ss_pred EEcCCcccHHHHHHCCeeEEeCCCC--CccccccccEEEecCCcccHH
Q 038599 300 MVGDGINDAPALAAVDIGISMGISG--SALAMESGHVILMSNDIRKIP 345 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~g~~~--~~~a~~~ad~vl~~~~l~~l~ 345 (473)
||||+.+|..+-++|++....-..+ .......+|+++ +++..+.
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~l~ 269 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGDVP 269 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhhcc
Confidence 9999999999999999854332122 221224578887 6665544
No 114
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.21 E-value=0.0021 Score=60.67 Aligned_cols=113 Identities=12% Similarity=0.136 Sum_probs=75.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc-c----ChhhH--HHHHHHH-hhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE-L----LPQHK--EELVELL-KKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~-~----~P~~K--~~~v~~l-~~~g-~v~m 300 (473)
++.|++.+.+++|++. +++.++|+-.........+++|+.. +.+++. . .|+.. ...++.+ .-.. .++|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 5689999999999999 9999999998888888899999852 233221 1 23222 2333334 2222 6999
Q ss_pred EcCCc-ccHHHHHHCCe-eEEeCC-CCCccccccccEEEecCCcccHHHH
Q 038599 301 VGDGI-NDAPALAAVDI-GISMGI-SGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 301 vGDG~-ND~~al~~Adv-gIa~g~-~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
|||.. +|..+-+.+++ +|.... ..++.....++.++ +++..+..+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 99998 89999999997 333321 11222233566666 666666543
No 115
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.20 E-value=0.0023 Score=71.82 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=96.5
Q ss_pred hhHHHHhcCCceeeEeeeCCeEEEEEEe--cCccCCchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCc--c--
Q 038599 202 SIAEAKCTGGKTRGYVYLGATPVGTFSL--SDSCRSGALEAIKDLKS-LGIKSFILAGDSHAAALYAQDQLDHAF--D-- 274 (473)
Q Consensus 202 ~~~~~~~~~G~~vi~va~d~~~lG~i~l--~d~lr~~a~~~I~~L~~-~gi~v~mlTGD~~~~a~~~a~~~gi~~--~-- 274 (473)
.....|.+...+.+++-.||+++....- ...+.+++.+++++|.+ .|+.++++||.+..........+++.- +
T Consensus 482 ~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG 561 (726)
T PRK14501 482 EIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHG 561 (726)
T ss_pred HHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCC
Confidence 3456666666788899999998764211 12356789999999999 599999999999988877665444211 0
Q ss_pred -----------------------------------------------cee------------------------------
Q 038599 275 -----------------------------------------------MVY------------------------------ 277 (473)
Q Consensus 275 -----------------------------------------------~v~------------------------------ 277 (473)
.++
T Consensus 562 ~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~ 641 (726)
T PRK14501 562 AWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLE 641 (726)
T ss_pred EEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 000
Q ss_pred -------hccCh--hhHHHHHHHHhhCC---cEEEEcCCcccHHHHHHC---CeeEEeCCCCCccccccccEEEecCCcc
Q 038599 278 -------AELLP--QHKEELVELLKKDG---ATAMVGDGINDAPALAAV---DIGISMGISGSALAMESGHVILMSNDIR 342 (473)
Q Consensus 278 -------a~~~P--~~K~~~v~~l~~~g---~v~mvGDG~ND~~al~~A---dvgIa~g~~~~~~a~~~ad~vl~~~~l~ 342 (473)
-++.| -+|...++.+.+.. .++++||+.||.+|++.+ +.+|++| ++ ..+|++.+ ++..
T Consensus 642 v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l--~~~~ 714 (726)
T PRK14501 642 VLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRL--PSQR 714 (726)
T ss_pred EEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeC--CCHH
Confidence 01112 36777777766542 699999999999999996 5889997 42 45688888 4445
Q ss_pred cHHHHHH
Q 038599 343 KIPKAIK 349 (473)
Q Consensus 343 ~l~~~i~ 349 (473)
.+..+++
T Consensus 715 eV~~~L~ 721 (726)
T PRK14501 715 EVRELLR 721 (726)
T ss_pred HHHHHHH
Confidence 5555443
No 116
>PRK09449 dUMP phosphatase; Provisional
Probab=97.18 E-value=0.0037 Score=59.26 Aligned_cols=114 Identities=16% Similarity=0.164 Sum_probs=75.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc----Ch--hhHHHHHHHHhh-CC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL----LP--QHKEELVELLKK-DG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~----~P--~~K~~~v~~l~~-~g-~v~m 300 (473)
++.|++.+++++|+ .|+++.++|+.....+...-+++|+.. +.+ .++- .| +-=...++.+.- .. .+.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 46899999999999 689999999988888888888888852 122 2211 23 222333444432 22 6999
Q ss_pred EcCCc-ccHHHHHHCCee-EEeCCCCCc-cccccccEEEecCCcccHHHHH
Q 038599 301 VGDGI-NDAPALAAVDIG-ISMGISGSA-LAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 301 vGDG~-ND~~al~~Advg-Ia~g~~~~~-~a~~~ad~vl~~~~l~~l~~~i 348 (473)
|||.. +|..+-++|++- |.+...+.. .....+|+++ +++..+..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999984 444312211 1122467777 6677766654
No 117
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.18 E-value=0.0017 Score=60.79 Aligned_cols=51 Identities=24% Similarity=0.347 Sum_probs=41.2
Q ss_pred EeeeCCeEEEEEEecC--ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC
Q 038599 216 YVYLGATPVGTFSLSD--SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD 270 (473)
Q Consensus 216 ~va~d~~~lG~i~l~d--~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g 270 (473)
++-.|++++. .+ ++.+++.+++++|++.|++++++||.....+..+.+.++
T Consensus 3 ~~D~DgTL~~----~~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 3 FFDLDGTLLD----PNAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred EEeCcCCCcC----CCCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 4456777764 22 467899999999999999999999999999988887644
No 118
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.10 E-value=0.0027 Score=58.16 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=66.1
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcCCC---------c--cc-eehccChhhH--HHHHHHHhh
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGD-SHAAALYAQDQLDHA---------F--DM-VYAELLPQHK--EELVELLKK 294 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD-~~~~a~~~a~~~gi~---------~--~~-v~a~~~P~~K--~~~v~~l~~ 294 (473)
+-++.|++.+.++.|+++|+++.++|+- ....+..+.+.+|+. . +. +.++-.+..| ..+.+.+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 4457899999999999999999999975 888888898999875 1 12 2222211222 233454442
Q ss_pred C------C-cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 295 D------G-ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 295 ~------g-~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
. . .++||||...|+.+.++|++-...
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 1 2 799999999999999999885543
No 119
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.03 E-value=0.0033 Score=55.80 Aligned_cols=86 Identities=26% Similarity=0.355 Sum_probs=59.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCcc-ceehc-----c--ChhhHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAFD-MVYAE-----L--LPQHKEEL 288 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~~-~v~a~-----~--~P~~K~~~ 288 (473)
.+.|++.++++.|++.|+++.++|+.+. .....+.+.+|+... .++.. . ....+.++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 3689999999999999999999998762 455667788888622 12211 0 01223333
Q ss_pred HHH-HhhCC----cEEEEcCCcccHHHHHHCCee
Q 038599 289 VEL-LKKDG----ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 289 v~~-l~~~g----~v~mvGDG~ND~~al~~Advg 317 (473)
++. +++.| .+.||||...|..+.+.+++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 333 23233 699999999999999998873
No 120
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.00 E-value=0.0024 Score=57.12 Aligned_cols=88 Identities=23% Similarity=0.249 Sum_probs=66.3
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC--cccee-hc----cCh--hhHHHHHHHHhhCC-cEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA--FDMVY-AE----LLP--QHKEELVELLKKDG-ATA 299 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~--~~~v~-a~----~~P--~~K~~~v~~l~~~g-~v~ 299 (473)
..++.|++.+.+++|++.|++++++|+.+........+++|+. .+.++ +. ..| +-=..+++.+.-.. .++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~ 154 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEIL 154 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEE
Confidence 4567899999999999999999999999999999999999987 22232 22 112 22233344443333 799
Q ss_pred EEcCCcccHHHHHHCCee
Q 038599 300 MVGDGINDAPALAAVDIG 317 (473)
Q Consensus 300 mvGDG~ND~~al~~Advg 317 (473)
||||...|..+-+.|++-
T Consensus 155 ~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 155 FVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEESSHHHHHHHHHTTSE
T ss_pred EEeCCHHHHHHHHHcCCe
Confidence 999999999999999873
No 121
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.97 E-value=0.0025 Score=58.35 Aligned_cols=84 Identities=18% Similarity=0.098 Sum_probs=57.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-h----ccChh--hHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-A----ELLPQ--HKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a----~~~P~--~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++.|+++|+++.++|+... +....+.+|+.. +.++ + ...|. -=....+.+.-.. .++||
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 5789999999999999999999996432 456778888762 1221 1 11222 1122233333222 69999
Q ss_pred cCCcccHHHHHHCCee
Q 038599 302 GDGINDAPALAAVDIG 317 (473)
Q Consensus 302 GDG~ND~~al~~Advg 317 (473)
||..+|..+.+.+++-
T Consensus 165 gD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMF 180 (185)
T ss_pred ecCHHHHHHHHHcCCE
Confidence 9999999999999883
No 122
>PLN02940 riboflavin kinase
Probab=96.97 E-value=0.0031 Score=65.28 Aligned_cols=86 Identities=17% Similarity=0.132 Sum_probs=61.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCc--ccee-hc----cC--hhhHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD-QLDHAF--DMVY-AE----LL--PQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~-~~gi~~--~~v~-a~----~~--P~~K~~~v~~l~~~g-~v~m 300 (473)
.+.|++.+.++.|++.|+++.++|+.....+....+ ..|+.. +.+. ++ .. |+-=..+++.+.-.. .++|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~ 172 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLV 172 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 467999999999999999999999998888776665 677742 1121 11 12 222233333443333 7999
Q ss_pred EcCCcccHHHHHHCCee
Q 038599 301 VGDGINDAPALAAVDIG 317 (473)
Q Consensus 301 vGDG~ND~~al~~Advg 317 (473)
|||..+|..+-+.|++.
T Consensus 173 VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 173 IEDSLPGVMAGKAAGME 189 (382)
T ss_pred EeCCHHHHHHHHHcCCE
Confidence 99999999999999984
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.93 E-value=0.0023 Score=57.97 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=69.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcC----CCccceehc------------------cChhhHHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLD----HAFDMVYAE------------------LLPQHKEELV 289 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~g----i~~~~v~a~------------------~~P~~K~~~v 289 (473)
.++|+.++.++.+++.+++++++|+-...-...+-++++ |..-.+.++ .--.+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 478999999999999999999999888777777777766 321111110 0124899999
Q ss_pred HHHhhCC-cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 290 ELLKKDG-ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 290 ~~l~~~g-~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
+.|++.. .+.|+|||+.|..|.+..|+=.|-
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 9999987 899999999999999988876653
No 124
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=96.90 E-value=0.0015 Score=62.38 Aligned_cols=76 Identities=17% Similarity=0.100 Sum_probs=47.3
Q ss_pred ccCchhHHHHHHHHHHHHHHHHh---hhcchhHHHHHHHHHHhcchhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH
Q 038599 3 SQKKWPAPSVMASGLLLALSFLG---YIYHPLQSLAVAAVIFGLPAILIRSIASIKSLTFNINVLILMAVLIFCAFSKAA 79 (473)
Q Consensus 3 ~~~~~~~~~~i~~~i~~~~~~~~---~~~~~~~~~~~~~v~~~~~p~~l~~~~t~~~~~~~~~~~l~~a~a~~~a~~~la 79 (473)
++.+++.+++++.++++++..+. .......+....++++...|..+|...++ ++..++.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~---------------~~~~~~~~~~ 216 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPL---------------SLAIAARRLA 216 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHH---------------HHHHHHHHHH
T ss_pred HHHHHHHhcccccchhhhccceecccccccccccccccceeeeecccceeehHHH---------------HHHHHHHHHH
Confidence 34455555555555554432111 00011122444556666677777766555 8999999999
Q ss_pred HCCceeeCchHhhh
Q 038599 80 TTGLLVKGGDYLEI 93 (473)
Q Consensus 80 k~gilvk~~~~lE~ 93 (473)
++|+++|+++++|+
T Consensus 217 ~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 217 KNGIIVKNLSALEA 230 (230)
T ss_dssp HTTEEESSTTHHHH
T ss_pred HCCEEEeCcccccC
Confidence 99999999999995
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.86 E-value=0.0035 Score=57.34 Aligned_cols=85 Identities=20% Similarity=0.117 Sum_probs=59.7
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-----ccChhhH--HHHHHHHhhCC-cEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-----ELLPQHK--EELVELLKKDG-ATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-----~~~P~~K--~~~v~~l~~~g-~v~m 300 (473)
-++.|++.++++.|++.|+++.++|+. ..+..+.+..|+.. +.+++ ...|... ....+.+.-.. .++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~ 164 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVV 164 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 468999999999999999999999986 55777888888751 12221 1123221 12222222222 6999
Q ss_pred EcCCcccHHHHHHCCee
Q 038599 301 VGDGINDAPALAAVDIG 317 (473)
Q Consensus 301 vGDG~ND~~al~~Advg 317 (473)
|||..+|..+-+.|++.
T Consensus 165 IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 165 FEDALAGVQAARAAGMF 181 (185)
T ss_pred EeCcHhhHHHHHHCCCe
Confidence 99999999999999874
No 126
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.85 E-value=0.0087 Score=55.88 Aligned_cols=57 Identities=21% Similarity=0.195 Sum_probs=45.6
Q ss_pred eeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 213 TRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
.+++.-.|+++++ -+. --..+.+.+.+|+++|++|+.+|......-....+.+|+..
T Consensus 8 ~lIFtDlD~TLl~-~~y---e~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 8 LLIFTDLDGTLLP-HSY---EWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred eEEEEcccCcccC-CCC---CCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 4667777888776 222 13467889999999999999999999999999999999873
No 127
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.80 E-value=0.011 Score=53.87 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=67.9
Q ss_pred eeeEeeeCCeEEEEEE----ecCc-----cCCchHHHHHHHHhCCCeEEEEcCCCHH------------HHHHHHHHcCC
Q 038599 213 TRGYVYLGATPVGTFS----LSDS-----CRSGALEAIKDLKSLGIKSFILAGDSHA------------AALYAQDQLDH 271 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~----l~d~-----lr~~a~~~I~~L~~~gi~v~mlTGD~~~------------~a~~~a~~~gi 271 (473)
+.+++-.|++++-.-. ..++ +-|++.+++++|+++|+++.++|..+.. ....+.+.+|+
T Consensus 14 k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl 93 (166)
T TIGR01664 14 KVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKV 93 (166)
T ss_pred cEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 4566677887764211 1111 3489999999999999999999975542 45677889998
Q ss_pred Ccccee-hcc----Ch--hhHHHHHHHHh--hCC-cEEEEcCCc--------ccHHHHHHCCee
Q 038599 272 AFDMVY-AEL----LP--QHKEELVELLK--KDG-ATAMVGDGI--------NDAPALAAVDIG 317 (473)
Q Consensus 272 ~~~~v~-a~~----~P--~~K~~~v~~l~--~~g-~v~mvGDG~--------ND~~al~~Advg 317 (473)
....+. ++- .| +-=..+++.+. -.. .+.||||.. +|..+-++|++-
T Consensus 94 ~~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~ 157 (166)
T TIGR01664 94 PIQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE 157 (166)
T ss_pred CEEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence 642222 111 22 22233344443 222 699999986 699998888764
No 128
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.79 E-value=0.0081 Score=54.64 Aligned_cols=84 Identities=17% Similarity=0.122 Sum_probs=59.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cce-ehcc----C--hhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMV-YAEL----L--PQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v-~a~~----~--P~~K~~~v~~l~~~g-~v~mv 301 (473)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+.. +.+ .++- . |+-=..+.+.+.... .+.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 578999999999999999999999888777 66666688852 122 2211 2 222233333333333 79999
Q ss_pred cCCcccHHHHHHCCe
Q 038599 302 GDGINDAPALAAVDI 316 (473)
Q Consensus 302 GDG~ND~~al~~Adv 316 (473)
||...|..+-+++++
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999998887
No 129
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.72 E-value=0.0069 Score=54.82 Aligned_cols=86 Identities=23% Similarity=0.254 Sum_probs=59.9
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCccce-eh-----ccC--hhhHHHHH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGD---------------SHAAALYAQDQLDHAFDMV-YA-----ELL--PQHKEELV 289 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD---------------~~~~a~~~a~~~gi~~~~v-~a-----~~~--P~~K~~~v 289 (473)
+-|++.+++++|+++|++++++|.- .......+.+.+|+.-+.+ ++ +-. ...|..++
T Consensus 30 ~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~~~ 109 (161)
T TIGR01261 30 FEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIKLL 109 (161)
T ss_pred ECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHHHH
Confidence 5689999999999999999999974 2445677788888863323 22 111 11233333
Q ss_pred HHH-hhCC----cEEEEcCCcccHHHHHHCCeeE
Q 038599 290 ELL-KKDG----ATAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 290 ~~l-~~~g----~v~mvGDG~ND~~al~~AdvgI 318 (473)
+.+ ++.+ .+.||||+.+|..+.+.+++-.
T Consensus 110 ~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 110 EPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred HHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 333 2222 6999999999999999999843
No 130
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.66 E-value=0.016 Score=52.25 Aligned_cols=88 Identities=23% Similarity=0.218 Sum_probs=63.5
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHH-----cCCCcccee--------------hccChhh-HH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL---YAQDQ-----LDHAFDMVY--------------AELLPQH-KE 286 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~---~~a~~-----~gi~~~~v~--------------a~~~P~~-K~ 286 (473)
+|...|++.+++++++++|++++.+||.....+. ...++ .+++...++ -.-.|++ |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3677899999999999999999999999988774 44555 234321111 0123444 88
Q ss_pred HHHHHHhh----CC--cEEEEcCCcccHHHHHHCCee
Q 038599 287 ELVELLKK----DG--ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 287 ~~v~~l~~----~g--~v~mvGDG~ND~~al~~Advg 317 (473)
+.++.+++ ++ .++..||+.+|..+.+++++-
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 88887776 24 467799999999999987763
No 131
>PTZ00174 phosphomannomutase; Provisional
Probab=96.59 E-value=0.0073 Score=58.53 Aligned_cols=53 Identities=17% Similarity=0.089 Sum_probs=41.4
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD 267 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~ 267 (473)
.+.+++-.||+++. =..++.+.++++|++++++|+++++.||.+........+
T Consensus 5 ~klia~DlDGTLL~---~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTK---PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcC---CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 45667777888752 223478889999999999999999999999886655443
No 132
>PLN02811 hydrolase
Probab=96.56 E-value=0.0067 Score=57.61 Aligned_cols=87 Identities=15% Similarity=0.106 Sum_probs=57.6
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHH-HHHHcCCCc---cceehc------c--ChhhHHHHHHHHh---hC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALY-AQDQLDHAF---DMVYAE------L--LPQHKEELVELLK---KD 295 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~-~a~~~gi~~---~~v~a~------~--~P~~K~~~v~~l~---~~ 295 (473)
-++.|++.+.++.|++.|+++.++||-....... ..+..++.. ..+.++ . .|+-=...++.+. -.
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 156 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVD 156 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCC
Confidence 4568999999999999999999999877643332 322234421 122222 1 1222234445553 22
Q ss_pred C-cEEEEcCCcccHHHHHHCCee
Q 038599 296 G-ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 296 g-~v~mvGDG~ND~~al~~Advg 317 (473)
. .++||||...|..+-+.|++-
T Consensus 157 ~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 157 PGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred ccceEEEeccHhhHHHHHHCCCe
Confidence 2 699999999999999999983
No 133
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.51 E-value=0.0086 Score=57.94 Aligned_cols=62 Identities=26% Similarity=0.340 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHhhC----C-cEEEEcCCcccHHHHHHC--------CeeEEeCCCCCccccccccEEEecCCcccHHHHH
Q 038599 282 PQHKEELVELLKKD----G-ATAMVGDGINDAPALAAV--------DIGISMGISGSALAMESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 282 P~~K~~~v~~l~~~----g-~v~mvGDG~ND~~al~~A--------dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i 348 (473)
+.+|...++.+.++ . .++|+||+.||..+++.+ ..++.++ .+. .+..|++++ ++...+...+
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~--~~~~~v~~~L 239 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHL--TGPQQVLEFL 239 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeC--CCHHHHHHHH
Confidence 34677777766543 2 699999999999999998 4788884 332 345688888 5666665554
No 134
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.51 E-value=0.012 Score=59.94 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=60.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCC---------------CHHHHHHHHHHcCCCccceehc------c--ChhhHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGD---------------SHAAALYAQDQLDHAFDMVYAE------L--LPQHKEE 287 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD---------------~~~~a~~~a~~~gi~~~~v~a~------~--~P~~K~~ 287 (473)
-.+.|++.+++++|+++|+++.++|+- .......+.+..|+.-+.++.. - ....|..
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p~ 108 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKTG 108 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCHH
Confidence 457899999999999999999999983 2344666778888753333211 1 1123343
Q ss_pred HHHHH-hhC----CcEEEEcCCcccHHHHHHCCee
Q 038599 288 LVELL-KKD----GATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 288 ~v~~l-~~~----g~v~mvGDG~ND~~al~~Advg 317 (473)
.+..+ ++. ..+.||||+.+|..+-+.|++-
T Consensus 109 ~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 109 LVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 44433 222 2799999999999999999984
No 135
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.47 E-value=0.003 Score=56.29 Aligned_cols=89 Identities=18% Similarity=0.024 Sum_probs=64.7
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-hccChhhHHHHHHHHhhCC----cEEEE
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-AELLPQHKEELVELLKKDG----ATAMV 301 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a~~~P~~K~~~v~~l~~~g----~v~mv 301 (473)
.-.+||++.+.++.|+ .++++.+.|.-+...+..+.+.+|+.. +.++ .+-....|-.+.+.++..| .+.||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3457999999999999 579999999999999999999998852 1222 2222223333555555443 79999
Q ss_pred cCCcccHHHHHHCCeeEE
Q 038599 302 GDGINDAPALAAVDIGIS 319 (473)
Q Consensus 302 GDG~ND~~al~~AdvgIa 319 (473)
||..+|..+-+++.+-|.
T Consensus 122 ~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 122 DDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ECCHHHhhcCccCEEEec
Confidence 999999988777766554
No 136
>PLN02580 trehalose-phosphatase
Probab=96.47 E-value=0.028 Score=57.79 Aligned_cols=62 Identities=15% Similarity=0.124 Sum_probs=44.1
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCc--cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDS--CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~--lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a 266 (473)
+..+.+...+++++-+||++.-+..--|. +-++.++++++|.+. .++.++||.......++.
T Consensus 111 ~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l 174 (384)
T PLN02580 111 IANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELV 174 (384)
T ss_pred HHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHh
Confidence 34455555678888999998765522111 355888999999887 589999999877765543
No 137
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.44 E-value=0.012 Score=54.81 Aligned_cols=84 Identities=19% Similarity=0.173 Sum_probs=57.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-----ccChhh--HHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-----ELLPQH--KEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-----~~~P~~--K~~~v~~l~~~g-~v~mv 301 (473)
.+.|++.++++.|++.|+++.++|+-... .....+.+|+.. +.++. ...|+. =..+++.+.-.. .++||
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 56799999999999999999999976543 467778888852 12221 112321 122233333223 79999
Q ss_pred cCCc-ccHHHHHHCCe
Q 038599 302 GDGI-NDAPALAAVDI 316 (473)
Q Consensus 302 GDG~-ND~~al~~Adv 316 (473)
||.. +|..+-++|++
T Consensus 184 gD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 184 GDSLRNDYQGARAAGW 199 (203)
T ss_pred CCCchHHHHHHHHcCC
Confidence 9997 89999888876
No 138
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.37 E-value=0.012 Score=59.46 Aligned_cols=105 Identities=16% Similarity=0.085 Sum_probs=75.6
Q ss_pred eeEeeeCCeEEEEEEecC--------ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH----cCCCccceehc--
Q 038599 214 RGYVYLGATPVGTFSLSD--------SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ----LDHAFDMVYAE-- 279 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d--------~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~----~gi~~~~v~a~-- 279 (473)
++.+-.|+++.|-+.-+| ++.+++.+++++|+++|+.+.++|.-+...+..+-++ +|+. ..|..
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~--~~f~~~~ 82 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQA--EDFDARS 82 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcH--HHeeEEE
Confidence 344444555544333333 3568999999999999999999999999999999998 8876 32222
Q ss_pred cChhhHHHHHHHHhhC---C--cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 280 LLPQHKEELVELLKKD---G--ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~---g--~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
..++.|...++.+.++ + .++||||...|..+.+++...+.+
T Consensus 83 ~~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 83 INWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred EecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 3344566655554332 2 799999999999999998877644
No 139
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.34 E-value=0.028 Score=54.19 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=64.9
Q ss_pred ceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH--HHHHHcCCCccceehc-cChhh-HHH
Q 038599 212 KTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL--YAQDQLDHAFDMVYAE-LLPQH-KEE 287 (473)
Q Consensus 212 ~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~--~~a~~~gi~~~~v~a~-~~P~~-K~~ 287 (473)
++.+.+-.|+++ .-.+.+-|++.+++++|+++|+++.++|.-...... ...+++|+..+ .+.. .++++ ...
T Consensus 8 ~~~~~~D~dG~l----~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~-~~~~Ii~s~~~~~~ 82 (242)
T TIGR01459 8 YDVFLLDLWGVI----IDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINAD-LPEMIISSGEIAVQ 82 (242)
T ss_pred CCEEEEeccccc----ccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcc-ccceEEccHHHHHH
Confidence 445555556544 346778999999999999999999999986655444 56689999741 1212 22222 112
Q ss_pred HHHH-HhhC---C-cEEEEcCCcccHHHHHHCC
Q 038599 288 LVEL-LKKD---G-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 288 ~v~~-l~~~---g-~v~mvGDG~ND~~al~~Ad 315 (473)
.++. +++. + .+.|+||+.+|...+...+
T Consensus 83 ~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 83 MILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred HHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 3332 2322 3 6999999999988875443
No 140
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.32 E-value=0.017 Score=51.23 Aligned_cols=83 Identities=24% Similarity=0.268 Sum_probs=56.1
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc--cChhhHHHHHHH-HhhCC---cEEEEcC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE--LLPQHKEELVEL-LKKDG---ATAMVGD 303 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~--~~P~~K~~~v~~-l~~~g---~v~mvGD 303 (473)
...+++.+.++.|++.|+++.++|+-....+....+.. +.. +.++.. ..+..+.+.+.. +++.| .++||||
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~~~l~iGD 142 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPPEVLHVGD 142 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCCCEEEEeC
Confidence 34589999999999999999999999988888877774 321 112211 111122233332 23223 6999999
Q ss_pred CcccHHHHHHCC
Q 038599 304 GINDAPALAAVD 315 (473)
Q Consensus 304 G~ND~~al~~Ad 315 (473)
..+|..+-++|+
T Consensus 143 s~~Di~aa~~aG 154 (154)
T TIGR01549 143 NLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHcc
Confidence 999999888764
No 141
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.32 E-value=0.052 Score=52.97 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=38.9
Q ss_pred eEeeeCCeEEEEEEecCc----cCCchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCc
Q 038599 215 GYVYLGATPVGTFSLSDS----CRSGALEAIKDLKSLGIKSFILAGDSHAA---ALYAQDQLDHAF 273 (473)
Q Consensus 215 i~va~d~~~lG~i~l~d~----lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---a~~~a~~~gi~~ 273 (473)
+.+-.||++. -.+. +-|++.++|++|+++|++++++||.+..+ .....+++|++.
T Consensus 4 i~~D~DGtl~----~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 4 VLLDISGVLY----ISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred EEEeCCCeEE----eCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 3444565553 4455 78899999999999999999999876554 444445567653
No 142
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=96.28 E-value=0.02 Score=52.07 Aligned_cols=105 Identities=15% Similarity=0.083 Sum_probs=82.4
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCC--eEEEEcCC-------CHHHHHHHHHHcCCCccce-
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGI--KSFILAGD-------SHAAALYAQDQLDHAFDMV- 276 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi--~v~mlTGD-------~~~~a~~~a~~~gi~~~~v- 276 (473)
+.+.|.+.+.+-.|+++.. --++++.|+..+.+++|++.+. ++.++|.- +...|+.+.+.+|++ .+
T Consensus 36 Lk~~Gik~li~DkDNTL~~--~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~ 111 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTP--PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLR 111 (168)
T ss_pred hhhcCceEEEEcCCCCCCC--CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEE
Confidence 5677888888888887532 2467788999999999999976 49999975 478999999999997 44
Q ss_pred ehccChhhHHHHHHHHhhC-----C-cEEEEcCC-cccHHHHHHCC
Q 038599 277 YAELLPQHKEELVELLKKD-----G-ATAMVGDG-INDAPALAAVD 315 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~~-----g-~v~mvGDG-~ND~~al~~Ad 315 (473)
|....|....++.+.++.+ . .++||||- ..|..+-...+
T Consensus 112 h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 112 HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 5567898778888888754 3 79999997 67877655544
No 143
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.19 E-value=0.023 Score=54.21 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=62.3
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc---CCCc--cceeh---ccCh--hhHHHHHHHHhhCC-c
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL---DHAF--DMVYA---ELLP--QHKEELVELLKKDG-A 297 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~---gi~~--~~v~a---~~~P--~~K~~~v~~l~~~g-~ 297 (473)
++-++.||+.+++++|+++|+++.++|..+......+-+.. ++.. +.+|. ...| +-=..+++.+.-.. .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 45678999999999999999999999998877666665554 2221 01221 1122 22233344443333 6
Q ss_pred EEEEcCCcccHHHHHHCCeeE
Q 038599 298 TAMVGDGINDAPALAAVDIGI 318 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgI 318 (473)
++|+||...|+.|-++|++-.
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCEE
Confidence 999999999999999999843
No 144
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.19 E-value=0.022 Score=55.73 Aligned_cols=81 Identities=22% Similarity=0.261 Sum_probs=59.3
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCc---cceehccChhhHHHHHHHHhhC-CcEEEEc
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAF---DMVYAELLPQHKEELVELLKKD-GATAMVG 302 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~---~~v~a~~~P~~K~~~v~~l~~~-g~v~mvG 302 (473)
..++-|++.+.++.|++.|++++++|+... ..+....++.|++. +.++.+-....|....+.+.+. +.++|+|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vG 195 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFG 195 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEEC
Confidence 345679999999999999999999999763 34446667899963 2444443334566666666544 3799999
Q ss_pred CCcccHHH
Q 038599 303 DGINDAPA 310 (473)
Q Consensus 303 DG~ND~~a 310 (473)
|-.+|...
T Consensus 196 D~~~Df~~ 203 (266)
T TIGR01533 196 DNLLDFDD 203 (266)
T ss_pred CCHHHhhh
Confidence 99999754
No 145
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=96.16 E-value=0.022 Score=54.43 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=58.8
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCc-cceehcc-Chhh------HHHHHHHHhhCC--
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAA---ALYAQDQLDHAF-DMVYAEL-LPQH------KEELVELLKKDG-- 296 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---a~~~a~~~gi~~-~~v~a~~-~P~~------K~~~v~~l~~~g-- 296 (473)
.-+.-|++.++++.++++|++|+++||..... +..--++.|++. +.++-+- .... |...-+.+.++|
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYr 197 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYR 197 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCce
Confidence 34667899999999999999999999999755 445556788873 3333322 1112 777777888888
Q ss_pred cEEEEcCCcccH
Q 038599 297 ATAMVGDGINDA 308 (473)
Q Consensus 297 ~v~mvGDG~ND~ 308 (473)
.++.+||..+|.
T Consensus 198 Iv~~iGDq~sDl 209 (229)
T TIGR01675 198 IWGNIGDQWSDL 209 (229)
T ss_pred EEEEECCChHHh
Confidence 689999999995
No 146
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.07 E-value=0.027 Score=48.85 Aligned_cols=82 Identities=13% Similarity=0.079 Sum_probs=56.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCC-CHHHHHHHHHHcC-------CCc---cceehccCh--hhHHHHHHHHh--hCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGD-SHAAALYAQDQLD-------HAF---DMVYAELLP--QHKEELVELLK--KDG 296 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD-~~~~a~~~a~~~g-------i~~---~~v~a~~~P--~~K~~~v~~l~--~~g 296 (473)
++.+++.+.+++|+++|+++.++|+- ....+..+-+..| +.. ..+.++-.| +.=...++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 57899999999999999999999999 7777777777777 321 012221223 22233334444 333
Q ss_pred -cEEEEcCCcccHHHHHH
Q 038599 297 -ATAMVGDGINDAPALAA 313 (473)
Q Consensus 297 -~v~mvGDG~ND~~al~~ 313 (473)
.++|+||...|..+++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 79999999988776653
No 147
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.96 E-value=0.033 Score=64.93 Aligned_cols=110 Identities=20% Similarity=0.206 Sum_probs=76.2
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc---ccee-h----ccCh--hhHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF---DMVY-A----ELLP--QHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~---~~v~-a----~~~P--~~K~~~v~~l~~~g-~v~m 300 (473)
.+.|++.+.+++|+++|+++.++|+-....+...-+++|+.. +.++ + +..| +-=...++.+.-.. .++|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~ 240 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVV 240 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEE
Confidence 367999999999999999999999999999888889999851 2221 1 1223 22233344443333 6999
Q ss_pred EcCCcccHHHHHHCCe-eEEeCCCC---CccccccccEEEecCCcccH
Q 038599 301 VGDGINDAPALAAVDI-GISMGISG---SALAMESGHVILMSNDIRKI 344 (473)
Q Consensus 301 vGDG~ND~~al~~Adv-gIa~g~~~---~~~a~~~ad~vl~~~~l~~l 344 (473)
|||..+|+.+-+.|++ .|.+. .+ .+.....+|+++ +++..+
T Consensus 241 IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi--~~l~el 285 (1057)
T PLN02919 241 IEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIR--KDIGNI 285 (1057)
T ss_pred EcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEE--CChHHC
Confidence 9999999999999998 34343 22 223345677888 556553
No 148
>PRK10444 UMP phosphatase; Provisional
Probab=95.92 E-value=0.047 Score=53.04 Aligned_cols=47 Identities=11% Similarity=0.130 Sum_probs=37.7
Q ss_pred EEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH---cCCC
Q 038599 226 TFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ---LDHA 272 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~---~gi~ 272 (473)
++.-.+.+-|++.+++++|+++|++++++|+....+...++++ +|++
T Consensus 11 tL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 11 VLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred ceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3445678889999999999999999999999988776666555 5663
No 149
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.79 E-value=0.06 Score=61.23 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=50.7
Q ss_pred hhHHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHH
Q 038599 202 SIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDL-KSLGIKSFILAGDSHAAALYAQDQ 268 (473)
Q Consensus 202 ~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L-~~~gi~v~mlTGD~~~~a~~~a~~ 268 (473)
.....|.+...+.+++-.||+++-.-.....+.++..+++++| ++.|..++++||....+...+-..
T Consensus 586 ~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred HHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 3456676667788999999998743322335567899999997 777999999999998888766543
No 150
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.46 E-value=0.025 Score=54.88 Aligned_cols=45 Identities=24% Similarity=0.333 Sum_probs=35.6
Q ss_pred hhhHHHHHHHHhhC-C----cEEEEcCCcccHHHHHHCCeeEEeCCCCCcc
Q 038599 282 PQHKEELVELLKKD-G----ATAMVGDGINDAPALAAVDIGISMGISGSAL 327 (473)
Q Consensus 282 P~~K~~~v~~l~~~-g----~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~ 327 (473)
...|...++.|+++ + .|..+||+.||.+||..++-||.++ ++.+.
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHH
Confidence 35899999988866 2 6888999999999999999999998 55544
No 151
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.45 E-value=0.027 Score=46.74 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=51.3
Q ss_pred EecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCcc--ceehccChhhHHHHHHHHhh--CC-cEE
Q 038599 228 SLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ---DQLDHAFD--MVYAELLPQHKEELVELLKK--DG-ATA 299 (473)
Q Consensus 228 ~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a---~~~gi~~~--~v~a~~~P~~K~~~v~~l~~--~g-~v~ 299 (473)
...+.+-|++.++|++|+++|.+++++|.....+...++ +.+|+..+ +++. |. ....+.|++ .+ +|.
T Consensus 10 ~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t---s~--~~~~~~l~~~~~~~~v~ 84 (101)
T PF13344_consen 10 YNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT---SG--MAAAEYLKEHKGGKKVY 84 (101)
T ss_dssp EETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE---HH--HHHHHHHHHHTTSSEEE
T ss_pred EeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC---hH--HHHHHHHHhcCCCCEEE
Confidence 357888999999999999999999999988754433333 67888632 2222 21 123344544 23 899
Q ss_pred EEcCCcccHHHHHHCCe
Q 038599 300 MVGDGINDAPALAAVDI 316 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv 316 (473)
.+|.. .....++.+++
T Consensus 85 vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 85 VLGSD-GLREELREAGF 100 (101)
T ss_dssp EES-H-HHHHHHHHTTE
T ss_pred EEcCH-HHHHHHHHcCC
Confidence 99864 44556666553
No 152
>PLN03017 trehalose-phosphatase
Probab=95.42 E-value=0.18 Score=51.48 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=45.2
Q ss_pred hcCCceeeEeeeCCeEEEEEEecC--ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 038599 208 CTGGKTRGYVYLGATPVGTFSLSD--SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 208 ~~~G~~vi~va~d~~~lG~i~l~d--~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a 266 (473)
.+....++++-.||+++-+..-.| .+-++..++|++|+ .|+.+.++||........+.
T Consensus 107 ~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred hcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 344456777889999986665333 36789999999999 78999999999988887664
No 153
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.38 E-value=0.054 Score=52.01 Aligned_cols=80 Identities=24% Similarity=0.343 Sum_probs=61.3
Q ss_pred ccCCchHHHHHHH--HhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--ceehc---------------------cCh--hh
Q 038599 232 SCRSGALEAIKDL--KSLGIKSFILAGDSHAAALYAQDQLDHAFD--MVYAE---------------------LLP--QH 284 (473)
Q Consensus 232 ~lr~~a~~~I~~L--~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~v~a~---------------------~~P--~~ 284 (473)
|+.|+.+++++.+ ++.|+.++++|--|..--..+-+.-|+... .|+++ .-| -=
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 5678999999999 457999999999999999999999998632 12222 113 26
Q ss_pred HHHHHHHHhhC----C----cEEEEcCCccc-HHHH
Q 038599 285 KEELVELLKKD----G----ATAMVGDGIND-APAL 311 (473)
Q Consensus 285 K~~~v~~l~~~----g----~v~mvGDG~ND-~~al 311 (473)
|..+++.+++. | +|.+||||.|| +|++
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 88899888764 3 79999999999 4443
No 154
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.37 E-value=0.032 Score=52.32 Aligned_cols=87 Identities=22% Similarity=0.181 Sum_probs=55.4
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHH--HHHHHHHcCCCc--cceehc-----cChhhH--HHHHHHHhhCC-cE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAA--ALYAQDQLDHAF--DMVYAE-----LLPQHK--EELVELLKKDG-AT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~--a~~~a~~~gi~~--~~v~a~-----~~P~~K--~~~v~~l~~~g-~v 298 (473)
-++.|++.+.++.|+++|+++.++|+..... ........++.. +.++.. ..|+.. ...++.+.-.. .+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~ 172 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEEC 172 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 3568999999999999999999999865432 222222334421 122211 133322 22333333333 69
Q ss_pred EEEcCCcccHHHHHHCCee
Q 038599 299 AMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 299 ~mvGDG~ND~~al~~Advg 317 (473)
+||||...|..+-++|++-
T Consensus 173 l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 173 VFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred EEEcCCHHHHHHHHHcCCE
Confidence 9999999999999999883
No 155
>PLN02645 phosphoglycolate phosphatase
Probab=95.17 E-value=0.068 Score=53.69 Aligned_cols=109 Identities=11% Similarity=0.038 Sum_probs=69.7
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCcc--ceeh
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ---DQLDHAFD--MVYA 278 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a---~~~gi~~~--~v~a 278 (473)
+.++.. .+..+.+-.||++. -.+.+-|++.++|++|+++|++++++|+....+...+. +++|+... .++.
T Consensus 21 ~~~~~~-~~~~~~~D~DGtl~----~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~t 95 (311)
T PLN02645 21 ADELID-SVETFIFDCDGVIW----KGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFS 95 (311)
T ss_pred HHHHHH-hCCEEEEeCcCCeE----eCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEee
Confidence 344443 36677777787764 35677799999999999999999999999966665555 56887521 2322
Q ss_pred ccChhhHHHHHHHHhh-CCcEEEEcCCcccHHHHHHCCeeEE
Q 038599 279 ELLPQHKEELVELLKK-DGATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 279 ~~~P~~K~~~v~~l~~-~g~v~mvGDG~ND~~al~~AdvgIa 319 (473)
.. .....+++...- .+.-.++++...|...++.+++=..
T Consensus 96 s~--~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~ 135 (311)
T PLN02645 96 SS--FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYL 135 (311)
T ss_pred hH--HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEe
Confidence 21 112222222221 1234566666788899998887543
No 156
>PHA02597 30.2 hypothetical protein; Provisional
Probab=94.85 E-value=0.079 Score=49.12 Aligned_cols=84 Identities=19% Similarity=0.125 Sum_probs=54.7
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc------cce-ehccChhhHHHHHH-HHhhCC--cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF------DMV-YAELLPQHKEELVE-LLKKDG--ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~------~~v-~a~~~P~~K~~~v~-~l~~~g--~v~mv 301 (473)
.+.|++.+++++|++.+ +.+++|.-+........+.+|+.. +.+ .++... .|.+++. .+++.| .++||
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~v 151 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCFV 151 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhCCCcEEEe
Confidence 46899999999999975 566677655444444556666641 011 122221 2344444 333335 68999
Q ss_pred cCCcccHHHHHHC--Cee
Q 038599 302 GDGINDAPALAAV--DIG 317 (473)
Q Consensus 302 GDG~ND~~al~~A--dvg 317 (473)
||..+|..+-++| ++-
T Consensus 152 gDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 152 DDLAHNLDAAHEALSQLP 169 (197)
T ss_pred CCCHHHHHHHHHHHcCCc
Confidence 9999999999999 983
No 157
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.85 E-value=0.095 Score=48.80 Aligned_cols=87 Identities=13% Similarity=0.231 Sum_probs=55.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCc--ccee-h----ccChh--hHHHHHHHHhhCC-cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ-LDHAF--DMVY-A----ELLPQ--HKEELVELLKKDG-ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~-~gi~~--~~v~-a----~~~P~--~K~~~v~~l~~~g-~v~m 300 (473)
++.|++.+++++|++.|+++.++|+-+.......... .++.. +.++ + ...|. -=..+++.+.-.. .+.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 4689999999999999999999998776654433222 23321 1121 1 11232 2122233333222 6999
Q ss_pred EcCCcccHHHHHHCCeeE
Q 038599 301 VGDGINDAPALAAVDIGI 318 (473)
Q Consensus 301 vGDG~ND~~al~~AdvgI 318 (473)
|||...|..+-+++++-.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 164 FDDNADNIEAANALGITS 181 (199)
T ss_pred eCCCHHHHHHHHHcCCEE
Confidence 999999999999998843
No 158
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.83 E-value=0.2 Score=48.60 Aligned_cols=56 Identities=11% Similarity=0.031 Sum_probs=42.2
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC---CCHHHHHHHHHHcCCCc
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG---DSHAAALYAQDQLDHAF 273 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG---D~~~~a~~~a~~~gi~~ 273 (473)
.+++-.||++. -.+.+-|++.++|++|+++|++++++|| ..........+++|++.
T Consensus 3 ~~~~D~DGtl~----~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 3 GYLIDLDGTMY----KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34455566654 4566778999999999999999999996 55666666677777754
No 159
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=94.68 E-value=0.13 Score=47.03 Aligned_cols=82 Identities=17% Similarity=0.085 Sum_probs=58.5
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceeh-c------cChhhHHHHHHHHhhCC-cEEEEcC
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYA-E------LLPQHKEELVELLKKDG-ATAMVGD 303 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a-~------~~P~~K~~~v~~l~~~g-~v~mvGD 303 (473)
.| ..+.++.|++. ++..++|+.....+...-++.|+.. +.+.+ + ..|+-=....+.+.... .+.||||
T Consensus 90 ~~-~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igD 167 (188)
T PRK10725 90 LP-LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFED 167 (188)
T ss_pred cc-HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEec
Confidence 44 46899999875 8999999999999999999999862 12221 1 12222333344444333 6999999
Q ss_pred CcccHHHHHHCCee
Q 038599 304 GINDAPALAAVDIG 317 (473)
Q Consensus 304 G~ND~~al~~Advg 317 (473)
..+|..+-+.|++-
T Consensus 168 s~~di~aA~~aG~~ 181 (188)
T PRK10725 168 ADFGIQAARAAGMD 181 (188)
T ss_pred cHhhHHHHHHCCCE
Confidence 99999999999883
No 160
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=94.56 E-value=0.15 Score=48.17 Aligned_cols=87 Identities=9% Similarity=0.037 Sum_probs=60.3
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---cee-hcc----C--hhhHHHHHHHHhhCC-cEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MVY-AEL----L--PQHKEELVELLKKDG-ATA 299 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v~-a~~----~--P~~K~~~v~~l~~~g-~v~ 299 (473)
-++.|++.++++.| ++++.++|+.....+...-++.|+... .+. ++- . |+-=....+.+.-.. .++
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 35678999999988 489999999998888888888888621 121 211 1 222222333333223 699
Q ss_pred EEcCCcccHHHHHHCCeeEEe
Q 038599 300 MVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 300 mvGDG~ND~~al~~AdvgIa~ 320 (473)
||||..+|..+-++|++....
T Consensus 164 ~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEE
Confidence 999999999999999986653
No 161
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=94.54 E-value=0.11 Score=47.67 Aligned_cols=83 Identities=16% Similarity=0.115 Sum_probs=58.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--cceehc---------cChh--hHHHHHHHHhhCC-c
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVYAE---------LLPQ--HKEELVELLKKDG-A 297 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~a~---------~~P~--~K~~~v~~l~~~g-~ 297 (473)
++.+++.+++++|+ .+++++|+-+...+....+++|+.. +.+++. ..|. -=..+++.+.... .
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 36789999999987 4789999998889999999999852 122221 1332 2233333443333 6
Q ss_pred EEEEcCCcccHHHHHHCCee
Q 038599 298 TAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Advg 317 (473)
++||||...|..+-+.+++-
T Consensus 161 ~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCE
Confidence 89999999999999998874
No 162
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=94.27 E-value=0.068 Score=51.27 Aligned_cols=80 Identities=24% Similarity=0.273 Sum_probs=58.3
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCc-cceehccC--------hhhHHHHHHHHhhCC--
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAF-DMVYAELL--------PQHKEELVELLKKDG-- 296 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~-~~v~a~~~--------P~~K~~~v~~l~~~g-- 296 (473)
++.-|++.+.++.++++|++|+.+||.+. ..+..-.++.|+.. +.++-+.. .+.|...-+.++++|
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~ 193 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYR 193 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEE
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCc
Confidence 34567899999999999999999998764 34445567788764 33332221 124888888898997
Q ss_pred cEEEEcCCcccHHH
Q 038599 297 ATAMVGDGINDAPA 310 (473)
Q Consensus 297 ~v~mvGDG~ND~~a 310 (473)
.++++||..+|...
T Consensus 194 Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 194 IIANIGDQLSDFSG 207 (229)
T ss_dssp EEEEEESSGGGCHC
T ss_pred EEEEeCCCHHHhhc
Confidence 78999999999654
No 163
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=94.12 E-value=0.25 Score=47.44 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=52.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc--ccee-hc----cChhhH--HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF--DMVY-AE----LLPQHK--EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~--~~v~-a~----~~P~~K--~~~v~~l~~~g-~v~mv 301 (473)
++-|++.+++++|++. +++.++|..+.. .+..|+.. +.++ ++ ..|... ....+.+.-.. .++||
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 4678999999999975 888889875543 25567641 1121 21 123211 22223333223 69999
Q ss_pred cCC-cccHHHHHHCCeeEE
Q 038599 302 GDG-INDAPALAAVDIGIS 319 (473)
Q Consensus 302 GDG-~ND~~al~~AdvgIa 319 (473)
||. ..|..+-++|++-..
T Consensus 187 GD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred cCCcHHHHHHHHHCCCeEE
Confidence 999 599999999998443
No 164
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=93.59 E-value=0.32 Score=48.00 Aligned_cols=81 Identities=20% Similarity=0.149 Sum_probs=47.1
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHH-H-------------HHHHHcCCCccceehccChhhHHHHHHHHhhCC-cE
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAA-L-------------YAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-AT 298 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a-~-------------~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v 298 (473)
-++..++++.|++.|+ ..++|....... . .+....|-. ........|+-=..+++.+.-.. .+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~-~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQ-PLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCc-eeccCCCCHHHHHHHHHHhCCChhhE
Confidence 5688999999999887 566665332111 0 011111111 01122333433334445554333 89
Q ss_pred EEEcCCc-ccHHHHHHCCe
Q 038599 299 AMVGDGI-NDAPALAAVDI 316 (473)
Q Consensus 299 ~mvGDG~-ND~~al~~Adv 316 (473)
+||||.. .|..+-++|++
T Consensus 223 lmIGD~~~tDI~~A~~aGi 241 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGM 241 (279)
T ss_pred EEECCChHHHHHHHHHcCC
Confidence 9999995 99999999988
No 165
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=93.44 E-value=0.17 Score=47.59 Aligned_cols=87 Identities=24% Similarity=0.319 Sum_probs=62.6
Q ss_pred ccCCchHHHHHHHHhCCC-eEEEEcCCCHHHHHHHHHHcCCCccceehc--------------------------cChh-
Q 038599 232 SCRSGALEAIKDLKSLGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAE--------------------------LLPQ- 283 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~--------------------------~~P~- 283 (473)
|+-|+..++|+.+++.|. .++++|--|.--...+-+..|+.. .|++ +.|.
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d--~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD--LFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH--HHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 567899999999999996 899999999888888888888862 2221 1232
Q ss_pred -hHHHHHHHHhhC----C----cEEEEcCCccc-HHHHHHCCeeEEe
Q 038599 284 -HKEELVELLKKD----G----ATAMVGDGIND-APALAAVDIGISM 320 (473)
Q Consensus 284 -~K~~~v~~l~~~----g----~v~mvGDG~ND-~~al~~AdvgIa~ 320 (473)
=|-.++..++.. | ++.++|||.|| +|.++...--++|
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 355566655432 3 58999999999 5666655444555
No 166
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=93.16 E-value=0.47 Score=44.23 Aligned_cols=52 Identities=21% Similarity=0.307 Sum_probs=41.0
Q ss_pred EEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCcc
Q 038599 223 PVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAFD 274 (473)
Q Consensus 223 ~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~~ 274 (473)
+-|.+..+|..-|++.|+++.|++.+.+|..+|.-.. .+...--+++|+..+
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ 68 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS 68 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc
Confidence 4588999999999999999999999999999885554 444444456787653
No 167
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.21 E-value=1.6 Score=41.03 Aligned_cols=114 Identities=22% Similarity=0.177 Sum_probs=70.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-------ceehccChhhHHHHHHHHhhCC----cEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-------MVYAELLPQHKEELVELLKKDG----ATAM 300 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-------~v~a~~~P~~K~~~v~~l~~~g----~v~m 300 (473)
++-+++.++++++++. +++.++|.-.........+++|+..- .-.+...|.. .-+-..+++.| .++|
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~-~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDP-EIFEYALEKLGVPPEEALF 176 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCc-HHHHHHHHHcCCCcceEEE
Confidence 5577888999999888 88999998777888889999997521 1122233433 33444444444 5999
Q ss_pred EcCC-cccHHHHHHCCe-eEEeCCCCCc--cccccccEEEecCCcccHHHHHH
Q 038599 301 VGDG-INDAPALAAVDI-GISMGISGSA--LAMESGHVILMSNDIRKIPKAIK 349 (473)
Q Consensus 301 vGDG-~ND~~al~~Adv-gIa~g~~~~~--~a~~~ad~vl~~~~l~~l~~~i~ 349 (473)
|||. .||...-++++. ++-+...+.. ......+..+ .++..+..++.
T Consensus 177 VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~~ 227 (229)
T COG1011 177 VGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLLE 227 (229)
T ss_pred ECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHHh
Confidence 9996 677566677776 4444322211 1113455555 55655555543
No 168
>PLN02151 trehalose-phosphatase
Probab=92.12 E-value=1.3 Score=45.10 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=41.4
Q ss_pred CCceeeEeeeCCeEEEEEEecCc--cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH
Q 038599 210 GGKTRGYVYLGATPVGTFSLSDS--CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d~--lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a 266 (473)
....++++-+||+++-+..--|. +-++.++++++|. .+..+.++||.+......+.
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 34467788899998865433333 4568899999998 45799999999887776554
No 169
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=91.87 E-value=2.7 Score=41.39 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=60.6
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHH---HHHHHHHHcCCCccceehcc-ChhhHHHHH
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHA---AALYAQDQLDHAFDMVYAEL-LPQHKEELV 289 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~---~a~~~a~~~gi~~~~v~a~~-~P~~K~~~v 289 (473)
.+.+-.||++. -.+..-|++.++|++|+++|+++.++|+.... ....--+++|+... ..+. +|.. ...
T Consensus 4 ~~~~D~DGtl~----~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~--~~~i~ts~~--~~~ 75 (279)
T TIGR01452 4 GFIFDCDGVLW----LGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGL--AEQLFSSAL--CAA 75 (279)
T ss_pred EEEEeCCCceE----cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC--hhhEecHHH--HHH
Confidence 44555676663 35677889999999999999999999996533 22233466887532 1111 2211 223
Q ss_pred HHHhhC---C-cEEEEcCCcccHHHHHHCCeeEE
Q 038599 290 ELLKKD---G-ATAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 290 ~~l~~~---g-~v~mvGDG~ND~~al~~AdvgIa 319 (473)
+.|+++ + .|.++|+. .....++.+++-+.
T Consensus 76 ~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 76 RLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred HHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 344442 3 79999985 23456777766543
No 170
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.78 E-value=1.1 Score=40.31 Aligned_cols=88 Identities=23% Similarity=0.131 Sum_probs=64.1
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHH---HHHHHHc-----CCCcc---------------ceehccChhhHH
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAA---LYAQDQL-----DHAFD---------------MVYAELLPQHKE 286 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a---~~~a~~~-----gi~~~---------------~v~a~~~P~~K~ 286 (473)
.|..++++.+..+.++++|++++-+|+....-+ +...++. +++.- ++..+-.-+.|.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHH
Confidence 468899999999999999999999999985433 3333334 55432 122222346899
Q ss_pred HHHHHHhhC----C--cEEEEcCCcccHHHHHHCCee
Q 038599 287 ELVELLKKD----G--ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 287 ~~v~~l~~~----g--~v~mvGDG~ND~~al~~Advg 317 (473)
..++.++.. + ..+..|...+|+.+.+++++-
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 999999875 4 578889999999999988763
No 171
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=91.09 E-value=1.2 Score=42.45 Aligned_cols=88 Identities=19% Similarity=0.134 Sum_probs=69.6
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-----------cChhhHHHHHHHHhhCC-c
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-----------LLPQHKEELVELLKKDG-A 297 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-----------~~P~~K~~~v~~l~~~g-~ 297 (473)
..++.|++.+.+++|+++|+.+.+.|+-....+..+.+.+|+. .+|.. ..|+-=....+.|.-.. .
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~--~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~ 161 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLL--DYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEE 161 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccCh--hhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHH
Confidence 3578999999999999999999999999999999999999987 33322 23444444555554344 7
Q ss_pred EEEEcCCcccHHHHHHCCeeEE
Q 038599 298 TAMVGDGINDAPALAAVDIGIS 319 (473)
Q Consensus 298 v~mvGDG~ND~~al~~AdvgIa 319 (473)
+..+.|..+.+.|.++|++-+-
T Consensus 162 CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 162 CVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred eEEEecchhHHHHHHHCCCEEE
Confidence 9999999999999999998443
No 172
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=90.94 E-value=0.15 Score=46.15 Aligned_cols=85 Identities=15% Similarity=0.035 Sum_probs=59.2
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---ce-ehccChhhHHHHHHHHhhCC----cEEEEc
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---MV-YAELLPQHKEELVELLKKDG----ATAMVG 302 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---~v-~a~~~P~~K~~~v~~l~~~g----~v~mvG 302 (473)
=..||++.+.+++|++. +.+++.|......|..+.+.++.... .+ +.+-....|..+++.|..-| .|.|||
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVD 119 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIID 119 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEe
Confidence 34799999999999987 99999999999999999999997631 12 22111111222455554332 799999
Q ss_pred CCcccHHHHHHCCe
Q 038599 303 DGINDAPALAAVDI 316 (473)
Q Consensus 303 DG~ND~~al~~Adv 316 (473)
|...|..+-.++.+
T Consensus 120 D~~~~~~~~~~NgI 133 (162)
T TIGR02251 120 NSPYSYSLQPDNAI 133 (162)
T ss_pred CChhhhccCccCEe
Confidence 99988655444433
No 173
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=90.64 E-value=1.1 Score=48.32 Aligned_cols=102 Identities=20% Similarity=0.100 Sum_probs=65.3
Q ss_pred eeeEeeeCCeEEEEE----EecCc-----cCCchHHHHHHHHhCCCeEEEEcCCCH------------HHHHHHHHHcCC
Q 038599 213 TRGYVYLGATPVGTF----SLSDS-----CRSGALEAIKDLKSLGIKSFILAGDSH------------AAALYAQDQLDH 271 (473)
Q Consensus 213 ~vi~va~d~~~lG~i----~l~d~-----lr~~a~~~I~~L~~~gi~v~mlTGD~~------------~~a~~~a~~~gi 271 (473)
+++++-.|++++-.- ...|+ +-|++.+.+++|++.|++++++|.-.. ..+..+.+++|+
T Consensus 169 Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 169 KIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 466777787776321 11221 468999999999999999999997544 347788899998
Q ss_pred Cccceehcc-------ChhhHHHHHHHHh----hC-CcEEEEcCCcccHHHHHHC
Q 038599 272 AFDMVYAEL-------LPQHKEELVELLK----KD-GATAMVGDGINDAPALAAV 314 (473)
Q Consensus 272 ~~~~v~a~~-------~P~~K~~~v~~l~----~~-g~v~mvGDG~ND~~al~~A 314 (473)
+-+.+++.- .|+-=..+.+.+. -. ....||||...|..+-+.|
T Consensus 249 pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~a 303 (526)
T TIGR01663 249 PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAA 303 (526)
T ss_pred ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhc
Confidence 755443221 1222222333332 11 2699999999997664443
No 174
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=90.12 E-value=1.5 Score=43.02 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=53.8
Q ss_pred cCccCCchHHHHHHHHhCCCeEEEEcCCCHHH---HHHHHHHcCCCc-cceehccC--------hhhHHHHHHHHhhCC-
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSFILAGDSHAA---ALYAQDQLDHAF-DMVYAELL--------PQHKEELVELLKKDG- 296 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~---a~~~a~~~gi~~-~~v~a~~~--------P~~K~~~v~~l~~~g- 296 (473)
+.+.=|++.+..+.+++.|++++.+||..... +..--++.|++. +.++=+-. .+.|...=+.+.++|
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGY 222 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGY 222 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCc
Confidence 35566799999999999999999999998532 223335678863 22222211 123555556666777
Q ss_pred -cEEEEcCCcccH
Q 038599 297 -ATAMVGDGINDA 308 (473)
Q Consensus 297 -~v~mvGDG~ND~ 308 (473)
.++.+||..+|.
T Consensus 223 rIv~~iGDq~sDl 235 (275)
T TIGR01680 223 NIVGIIGDQWNDL 235 (275)
T ss_pred eEEEEECCCHHhc
Confidence 689999999994
No 175
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=89.86 E-value=3.7 Score=40.33 Aligned_cols=106 Identities=17% Similarity=0.213 Sum_probs=67.7
Q ss_pred EEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc----CCCc--cceehccChhhHHHHHHHHhhC---
Q 038599 225 GTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL----DHAF--DMVYAELLPQHKEELVELLKKD--- 295 (473)
Q Consensus 225 G~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~----gi~~--~~v~a~~~P~~K~~~v~~l~~~--- 295 (473)
|++.-.+.+=|++.++|+.|+++|++++.+|.....+...+++++ |++. +.++.. .. .....++++
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS----~~-at~~~l~~~~~~ 91 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS----GD-ATADYLAKQKPG 91 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH----HH-HHHHHHHhhCCC
Confidence 566688999999999999999999999999988876666444433 3321 122211 11 122333332
Q ss_pred CcEEEEcCCcccHHHHHHCCeeEEeCCCCCccccccccEEEecCCc
Q 038599 296 GATAMVGDGINDAPALAAVDIGISMGISGSALAMESGHVILMSNDI 341 (473)
Q Consensus 296 g~v~mvGDG~ND~~al~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l 341 (473)
++|.++|. ..+...|+.+++-+.-. ..+ ...|+|+...|-
T Consensus 92 ~kv~viG~-~~l~~~l~~~G~~~~~~--~~~---~~~d~Vv~g~d~ 131 (269)
T COG0647 92 KKVYVIGE-EGLKEELEGAGFELVDE--EEP---ARVDAVVVGLDR 131 (269)
T ss_pred CEEEEECC-cchHHHHHhCCcEEecc--CCC---CcccEEEEecCC
Confidence 38999994 34557888888877642 111 125777766553
No 176
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=89.58 E-value=0.74 Score=45.53 Aligned_cols=57 Identities=11% Similarity=0.115 Sum_probs=47.9
Q ss_pred eeeEeeeCCeEEEEEEecCc--cC-CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDS--CR-SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~--lr-~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.++++-.|++++.- +.+ +| |++.+++++|+++|+++.++|+-....+...-+++|+.
T Consensus 127 kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd 186 (301)
T TIGR01684 127 HVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD 186 (301)
T ss_pred eEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 46777778887542 332 56 99999999999999999999998988999999999998
No 177
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=87.62 E-value=0.9 Score=40.95 Aligned_cols=75 Identities=16% Similarity=0.038 Sum_probs=50.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc--c-eehcc----ChhhH--HHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD--M-VYAEL----LPQHK--EELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~--~-v~a~~----~P~~K--~~~v~~l~~~g-~v~mv 301 (473)
++.|++.++++ ++.++|.-+........++.|+..- . +.++. .|+.. ....+.+.-.. .++||
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 47889999987 3678898888888888899998621 1 11211 23222 33344443333 79999
Q ss_pred cCCcccHHHHHH
Q 038599 302 GDGINDAPALAA 313 (473)
Q Consensus 302 GDG~ND~~al~~ 313 (473)
||...|..+-++
T Consensus 163 gD~~~Di~~A~~ 174 (175)
T TIGR01493 163 AAHQWDLIGARK 174 (175)
T ss_pred ecChhhHHHHhc
Confidence 999999887654
No 178
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=87.52 E-value=21 Score=38.30 Aligned_cols=86 Identities=16% Similarity=0.133 Sum_probs=61.9
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH-cCCCcc-----ce------ehc------cChhhHHHHHHHHhh
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ-LDHAFD-----MV------YAE------LLPQHKEELVELLKK 294 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~-~gi~~~-----~v------~a~------~~P~~K~~~v~~l~~ 294 (473)
+++++.+. +++.|.+ +++|+-...-++.++++ +|++.- ++ -++ +.-++|.+.++....
T Consensus 111 l~~~a~~~---~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g 186 (497)
T PLN02177 111 VHPETWRV---FNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG 186 (497)
T ss_pred cCHHHHHH---HHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence 66765554 4567754 99999999999999987 898721 00 011 233569888875443
Q ss_pred CC-cEEEEcCCcccHHHHHHCCeeEEeCC
Q 038599 295 DG-ATAMVGDGINDAPALAAVDIGISMGI 322 (473)
Q Consensus 295 ~g-~v~mvGDG~ND~~al~~AdvgIa~g~ 322 (473)
.. ....-||..||.|+|+.||-...++.
T Consensus 187 ~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 187 DALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 22 34788999999999999999999973
No 179
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=86.85 E-value=1.9 Score=33.25 Aligned_cols=60 Identities=25% Similarity=0.290 Sum_probs=39.2
Q ss_pred ChhhHHHHHHHHhhCC-cEEEEcCC-cccHHHHHHCCe-eEEeCCCCC---ccc---cccccEEEecCCccc
Q 038599 281 LPQHKEELVELLKKDG-ATAMVGDG-INDAPALAAVDI-GISMGISGS---ALA---MESGHVILMSNDIRK 343 (473)
Q Consensus 281 ~P~~K~~~v~~l~~~g-~v~mvGDG-~ND~~al~~Adv-gIa~g~~~~---~~a---~~~ad~vl~~~~l~~ 343 (473)
.|.-=..+.+.+.-.. .+.||||. ..|..+-+++++ +|.+. +|. +.. ...+|+|+ +++..
T Consensus 6 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~-tG~~~~~~~~~~~~~pd~vv--~~l~e 74 (75)
T PF13242_consen 6 SPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVL-TGVYSPEDLEKAEHKPDYVV--DDLKE 74 (75)
T ss_dssp SHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEES-SSSSCCCGHHHSSSTTSEEE--SSGGG
T ss_pred cHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEEC-CCCCCHHHHhccCCCCCEEE--CCHHh
Confidence 3443444555554434 89999999 999999999998 44443 332 222 35788988 66654
No 180
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=85.53 E-value=3.4 Score=37.63 Aligned_cols=86 Identities=17% Similarity=0.239 Sum_probs=57.8
Q ss_pred cCCchHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCC----------ccceehccChhhHHHHHHHHhhC-C----
Q 038599 233 CRSGALEAIKDLKSLGIKSFILA-GDSHAAALYAQDQLDHA----------FDMVYAELLPQHKEELVELLKKD-G---- 296 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlT-GD~~~~a~~~a~~~gi~----------~~~v~a~~~P~~K~~~v~~l~~~-g---- 296 (473)
+-|++++++++|++.|+++.+.| -|.+..|..+-+.+++. .---+.+.-|..|..-.+.++++ |
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~ 125 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYE 125 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChh
Confidence 57899999999999999999999 58899999999999998 21223444578999999998865 3
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEe
Q 038599 297 ATAMVGDGINDAPALAAVDIGISM 320 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~ 320 (473)
.++++=|-.......+. +|+..
T Consensus 126 eMlFFDDe~~N~~~v~~--lGV~~ 147 (169)
T PF12689_consen 126 EMLFFDDESRNIEVVSK--LGVTC 147 (169)
T ss_dssp GEEEEES-HHHHHHHHT--TT-EE
T ss_pred HEEEecCchhcceeeEe--cCcEE
Confidence 58888776555555444 45543
No 181
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=85.45 E-value=1.6 Score=39.73 Aligned_cols=88 Identities=15% Similarity=0.172 Sum_probs=63.1
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHH----HHHHHHHHcCCCcc--ceehccChh-hHHHHHHHHhhCCcEEEEcCCc
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHA----AALYAQDQLDHAFD--MVYAELLPQ-HKEELVELLKKDGATAMVGDGI 305 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~----~a~~~a~~~gi~~~--~v~a~~~P~-~K~~~v~~l~~~g~v~mvGDG~ 305 (473)
+++-+++.|..=+++|-.++.+||.... ++..+|+...|... .+|+.-.|. .+..-...+|+++.-..-||..
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~IhYGDSD 194 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNIRIHYGDSD 194 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCCCcccccccHHHHhcCceEEecCCc
Confidence 5667889999888999999999998854 44566666666532 345544441 2223345567777678889999
Q ss_pred ccHHHHHHCCe-eEEe
Q 038599 306 NDAPALAAVDI-GISM 320 (473)
Q Consensus 306 ND~~al~~Adv-gIa~ 320 (473)
||..|.+.|++ ||-+
T Consensus 195 ~Di~AAkeaG~RgIRi 210 (237)
T COG3700 195 NDITAAKEAGARGIRI 210 (237)
T ss_pred hhhhHHHhcCccceeE
Confidence 99999999988 6654
No 182
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=83.34 E-value=2.8 Score=41.64 Aligned_cols=57 Identities=11% Similarity=0.087 Sum_probs=46.5
Q ss_pred eeeEeeeCCeEEEEEEecCc--cC-CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 213 TRGYVYLGATPVGTFSLSDS--CR-SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 213 ~vi~va~d~~~lG~i~l~d~--lr-~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.++++-.|++++-- +++ +| |++.+++++|+++|+++.++|+.+...+....+.+|+.
T Consensus 129 ~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 129 HVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46666778776542 333 45 89999999999999999999988888889999999997
No 183
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=81.91 E-value=17 Score=34.72 Aligned_cols=84 Identities=20% Similarity=0.258 Sum_probs=50.4
Q ss_pred EEecCccCCchHHHHHHHHhCCCeEEEEc---CCCHHHHHH-HHHHcCCCc--cceehccChhhHHHHHHHHhh--CC-c
Q 038599 227 FSLSDSCRSGALEAIKDLKSLGIKSFILA---GDSHAAALY-AQDQLDHAF--DMVYAELLPQHKEELVELLKK--DG-A 297 (473)
Q Consensus 227 i~l~d~lr~~a~~~I~~L~~~gi~v~mlT---GD~~~~a~~-~a~~~gi~~--~~v~a~~~P~~K~~~v~~l~~--~g-~ 297 (473)
+.-.+.+=|++.++|+.++++|+++.++| |.+...... +.+..|+.. ++++... ....+.|++ .+ .
T Consensus 9 L~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~-----~~~~~~l~~~~~~~~ 83 (236)
T TIGR01460 9 LWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG-----SVTKDLLRQRFEGEK 83 (236)
T ss_pred cCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH-----HHHHHHHHHhCCCCE
Confidence 33456677899999999999999999998 555544443 333367641 1222111 112233333 23 7
Q ss_pred EEEEcCCcccHHHHHHCCe
Q 038599 298 TAMVGDGINDAPALAAVDI 316 (473)
Q Consensus 298 v~mvGDG~ND~~al~~Adv 316 (473)
|.++|.. .....++..++
T Consensus 84 v~v~G~~-~~~~~l~~~g~ 101 (236)
T TIGR01460 84 VYVIGVG-ELRESLEGLGF 101 (236)
T ss_pred EEEECCH-HHHHHHHHcCC
Confidence 8999863 34556666553
No 184
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=77.71 E-value=10 Score=38.56 Aligned_cols=37 Identities=19% Similarity=0.118 Sum_probs=34.4
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-C
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL-D 270 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~-g 270 (473)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 569999999999999999999999999999999996 6
No 185
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=77.22 E-value=8.7 Score=35.37 Aligned_cols=85 Identities=22% Similarity=0.313 Sum_probs=54.0
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCH---------------HHHHHHHHHcCCCcc-ceehccChhh-------HHHHH
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSH---------------AAALYAQDQLDHAFD-MVYAELLPQH-------KEELV 289 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~---------------~~a~~~a~~~gi~~~-~v~a~~~P~~-------K~~~v 289 (473)
+.|++.+++..|+++|++++|+|.-+- .--...-++.|+.-+ .+++.-.|++ |.-.+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~ 111 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGML 111 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHH
Confidence 468999999999999999999995221 011223344553322 2333333442 33333
Q ss_pred H-HHhhCC----cEEEEcCCcccHHHHHHCCee
Q 038599 290 E-LLKKDG----ATAMVGDGINDAPALAAVDIG 317 (473)
Q Consensus 290 ~-~l~~~g----~v~mvGDG~ND~~al~~Advg 317 (473)
+ .+++.+ ...||||-..|..+-..+++.
T Consensus 112 ~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 112 LSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 3 333332 689999999999998888885
No 186
>PTZ00445 p36-lilke protein; Provisional
Probab=77.17 E-value=10 Score=35.76 Aligned_cols=113 Identities=15% Similarity=0.067 Sum_probs=70.2
Q ss_pred HHHHhcCCceeeEeeeCCeEEE-----EEE-------ecCccCCchHHHHHHHHhCCCeEEEEc-CCCHH----------
Q 038599 204 AEAKCTGGKTRGYVYLGATPVG-----TFS-------LSDSCRSGALEAIKDLKSLGIKSFILA-GDSHA---------- 260 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG-----~i~-------l~d~lr~~a~~~I~~L~~~gi~v~mlT-GD~~~---------- 260 (473)
.+.+.+.|.+++..-.|.++++ ..- +--.++|+.++.+++|++.|+++.++| .|...
T Consensus 35 v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~I 114 (219)
T PTZ00445 35 VDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYI 114 (219)
T ss_pred HHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCccee
Confidence 4567778888887777777665 221 122379999999999999999999998 34322
Q ss_pred ----HHHHHHHHcCCC--ccceehcc------------------ChhhHHHHHHHHh-hCC----cEEEEcCCcccHHHH
Q 038599 261 ----AALYAQDQLDHA--FDMVYAEL------------------LPQHKEELVELLK-KDG----ATAMVGDGINDAPAL 311 (473)
Q Consensus 261 ----~a~~~a~~~gi~--~~~v~a~~------------------~P~~K~~~v~~l~-~~g----~v~mvGDG~ND~~al 311 (473)
-+.+.-+.-+-. .+.+++-. .|+-|..-.+.+. +.| .++++-|....+.+.
T Consensus 115 sg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA 194 (219)
T PTZ00445 115 SGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNA 194 (219)
T ss_pred chHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHH
Confidence 233333322211 11222211 2444444234333 333 699999999999988
Q ss_pred HHCCe
Q 038599 312 AAVDI 316 (473)
Q Consensus 312 ~~Adv 316 (473)
++.++
T Consensus 195 ~~lGi 199 (219)
T PTZ00445 195 LKEGY 199 (219)
T ss_pred HHCCC
Confidence 88766
No 187
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=76.29 E-value=12 Score=31.82 Aligned_cols=68 Identities=16% Similarity=0.087 Sum_probs=45.7
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCC-e-EEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHH
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGI-K-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELV 289 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi-~-v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v 289 (473)
-.++++-.......+.+++.++.|++.|. + .+++-|.....-....++.|++ ..++.+.++++=...+
T Consensus 51 ~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~~G~d-~~~~~~~~~~~~~~~~ 120 (122)
T cd02071 51 VDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKEMGVA-EIFGPGTSIEEIIDKI 120 (122)
T ss_pred CCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHCCCC-EEECCCCCHHHHHHHH
Confidence 35666666677788889999999999977 3 4556665554445566789987 2455566665554443
No 188
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=75.94 E-value=11 Score=37.96 Aligned_cols=85 Identities=18% Similarity=0.122 Sum_probs=54.5
Q ss_pred EEEEecCccCCchHHHHHHHHhC----CCeEEEEcCCC---HH-HHHHHHHHcCCCcc--ceehccChhhHHHHHHHHhh
Q 038599 225 GTFSLSDSCRSGALEAIKDLKSL----GIKSFILAGDS---HA-AALYAQDQLDHAFD--MVYAELLPQHKEELVELLKK 294 (473)
Q Consensus 225 G~i~l~d~lr~~a~~~I~~L~~~----gi~v~mlTGD~---~~-~a~~~a~~~gi~~~--~v~a~~~P~~K~~~v~~l~~ 294 (473)
|++.-.+++-|++.++++.|++. |+++..+|... .. .+..+.+++|+..+ +++.... .....+++
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~~-----~~~~ll~~ 83 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSHS-----PYKSLVNK 83 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhhH-----HHHHHHHH
Confidence 45567788899999999999998 99999999654 33 35666688888532 3332222 22222222
Q ss_pred CC-cEEEEcCCcccHHHHHHCC
Q 038599 295 DG-ATAMVGDGINDAPALAAVD 315 (473)
Q Consensus 295 ~g-~v~mvGDG~ND~~al~~Ad 315 (473)
.+ .++++|.+. -...++.++
T Consensus 84 ~~~~v~viG~~~-~~~~l~~~G 104 (321)
T TIGR01456 84 YEKRILAVGTGS-VRGVAEGYG 104 (321)
T ss_pred cCCceEEEeChH-HHHHHHHcC
Confidence 23 788998754 234555444
No 189
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=75.76 E-value=21 Score=31.25 Aligned_cols=83 Identities=11% Similarity=0.025 Sum_probs=56.4
Q ss_pred HHhcCCceeeEeee--------------CCeEEEEEEecCccCCchHHHHHHHHhCCCe--EEEEcCCC------HHHHH
Q 038599 206 AKCTGGKTRGYVYL--------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIK--SFILAGDS------HAAAL 263 (473)
Q Consensus 206 ~~~~~G~~vi~va~--------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~--v~mlTGD~------~~~a~ 263 (473)
-+...|+.++|+.. +-.++|+-.+.....+.+++.++.|++.|.+ .+++-|-- .....
T Consensus 26 ~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~~ 105 (137)
T PRK02261 26 ALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEVE 105 (137)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHHH
Confidence 34567777777753 3467888888888889999999999999662 34555543 34556
Q ss_pred HHHHHcCCCccceehcc-ChhhHHHHHH
Q 038599 264 YAQDQLDHAFDMVYAEL-LPQHKEELVE 290 (473)
Q Consensus 264 ~~a~~~gi~~~~v~a~~-~P~~K~~~v~ 290 (473)
..++++|++ .+|..- .+++=...++
T Consensus 106 ~~l~~~G~~--~vf~~~~~~~~i~~~l~ 131 (137)
T PRK02261 106 KKFKEMGFD--RVFPPGTDPEEAIDDLK 131 (137)
T ss_pred HHHHHcCCC--EEECcCCCHHHHHHHHH
Confidence 778899987 777743 3444444443
No 190
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=75.20 E-value=6.9 Score=33.84 Aligned_cols=32 Identities=16% Similarity=0.200 Sum_probs=27.8
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAA 262 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a 262 (473)
+++.+++.++++++++.|+.++++||.+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 45778999999999999999999999987654
No 191
>PLN02423 phosphomannomutase
Probab=74.73 E-value=3.3 Score=40.02 Aligned_cols=38 Identities=21% Similarity=0.276 Sum_probs=32.1
Q ss_pred hhHHHHHHHHhhCCcEEEEcC----CcccHHHHHHCCe-eEEe
Q 038599 283 QHKEELVELLKKDGATAMVGD----GINDAPALAAVDI-GISM 320 (473)
Q Consensus 283 ~~K~~~v~~l~~~g~v~mvGD----G~ND~~al~~Adv-gIa~ 320 (473)
-+|...++.|+....|+.+|| |.||.+||+.-++ ++.+
T Consensus 188 vnKg~al~~L~~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~ 230 (245)
T PLN02423 188 WDKTYCLQFLEDFDEIHFFGDKTYEGGNDHEIFESERTIGHTV 230 (245)
T ss_pred CCHHHHHHHhcCcCeEEEEeccCCCCCCcHHHHhCCCcceEEe
Confidence 389999999993339999999 8999999997444 8877
No 192
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=74.55 E-value=7.4 Score=37.12 Aligned_cols=49 Identities=14% Similarity=-0.029 Sum_probs=26.9
Q ss_pred eeCCeEEEEEEecC--ccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHH
Q 038599 218 YLGATPVGTFSLSD--SCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQ 266 (473)
Q Consensus 218 a~d~~~lG~i~l~d--~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a 266 (473)
-+||++..+..-.+ .+.+++.+++++|.+. +..|+++||.+......+.
T Consensus 3 DyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~ 54 (235)
T PF02358_consen 3 DYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG 54 (235)
T ss_dssp E-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-
T ss_pred ccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc
Confidence 35666655444333 3456889999999887 4469999999998855553
No 193
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=74.30 E-value=3.1 Score=40.19 Aligned_cols=116 Identities=18% Similarity=0.238 Sum_probs=65.9
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccce--ehccC-----------------hhhHHH----
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMV--YAELL-----------------PQHKEE---- 287 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v--~a~~~-----------------P~~K~~---- 287 (473)
-.+|+++.+.++.|++.++++.+.|+-=......+-++.|...+++ .++.. +-.|-.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l~ 168 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESALE 168 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHHT
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCccccc
Confidence 3579999999999999999999999877777778888877654421 11110 112222
Q ss_pred ---HHHHHhhCCcEEEEcCCcccHHHHHHC---CeeEEeCC--CCC----ccccccccEEEecCCcccHHH
Q 038599 288 ---LVELLKKDGATAMVGDGINDAPALAAV---DIGISMGI--SGS----ALAMESGHVILMSNDIRKIPK 346 (473)
Q Consensus 288 ---~v~~l~~~g~v~mvGDG~ND~~al~~A---dvgIa~g~--~~~----~~a~~~ad~vl~~~~l~~l~~ 346 (473)
.-+.++.+..|...||..-|+.|-.-. +.-+.+|- ... +.-+++=|+|+.++.=-.++.
T Consensus 169 ~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~v~~ 239 (246)
T PF05822_consen 169 DSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMDVPN 239 (246)
T ss_dssp THHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-HHHH
T ss_pred CchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCchHHH
Confidence 123333444799999999998875544 22233221 111 233468899999886544443
No 194
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=73.69 E-value=15 Score=36.46 Aligned_cols=93 Identities=22% Similarity=0.241 Sum_probs=58.8
Q ss_pred HHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---
Q 038599 205 EAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL--- 281 (473)
Q Consensus 205 ~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~--- 281 (473)
....+.|..++|+..+..-+| +.+.-.|+..++.+. +..+|+-+....+...+|+..+++ |+-.++
T Consensus 64 va~~qlGg~~~~l~~~~~Qlg----r~Esi~DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP---ViNgLtD~~ 132 (310)
T COG0078 64 VAATQLGGHAIYLGPGDSQLG----RGESIKDTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP---VINGLTDEF 132 (310)
T ss_pred HHHHHcCCCeEEeCCCccccC----CCCcHHHHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc---eEccccccc
Confidence 345677888888877665444 233333444444443 567899999999999999999997 333333
Q ss_pred -hhhHH----HHHHHHhh-CC-cEEEEcCCcccH
Q 038599 282 -PQHKE----ELVELLKK-DG-ATAMVGDGINDA 308 (473)
Q Consensus 282 -P~~K~----~~v~~l~~-~g-~v~mvGDG~ND~ 308 (473)
|-|-. .+.+.+.. +| +++++|||.|=+
T Consensus 133 HP~Q~LADl~Ti~E~~g~l~g~k~a~vGDgNNv~ 166 (310)
T COG0078 133 HPCQALADLMTIKEHFGSLKGLKLAYVGDGNNVA 166 (310)
T ss_pred CcHHHHHHHHHHHHhcCcccCcEEEEEcCcchHH
Confidence 33322 22222222 35 899999995533
No 195
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=70.16 E-value=28 Score=30.43 Aligned_cols=75 Identities=13% Similarity=0.068 Sum_probs=49.3
Q ss_pred HHhcCCceeeEeee--------------CCeEEEEEEecCccCCchHHHHHHHHhCCCe--EEEEcCCC------HHHHH
Q 038599 206 AKCTGGKTRGYVYL--------------GATPVGTFSLSDSCRSGALEAIKDLKSLGIK--SFILAGDS------HAAAL 263 (473)
Q Consensus 206 ~~~~~G~~vi~va~--------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~--v~mlTGD~------~~~a~ 263 (473)
-+.+.|+.|+++.. +-.++|+=.+.-.--+..++.++.|+++|.+ .+++-|-. .....
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 34556677766643 3457777777666677789999999999873 45566631 11224
Q ss_pred HHHHHcCCCccceehccCh
Q 038599 264 YAQDQLDHAFDMVYAELLP 282 (473)
Q Consensus 264 ~~a~~~gi~~~~v~a~~~P 282 (473)
...+++|++ .+|..-+|
T Consensus 104 ~~l~~~Gv~--~vF~pgt~ 120 (134)
T TIGR01501 104 KRFKEMGFD--RVFAPGTP 120 (134)
T ss_pred HHHHHcCCC--EEECcCCC
Confidence 457889987 77775543
No 196
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=69.44 E-value=49 Score=32.47 Aligned_cols=66 Identities=15% Similarity=0.007 Sum_probs=49.2
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCc--cCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcCC
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDS--CRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQLDH 271 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~--lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~~gi 271 (473)
.+.....+.+++-+||++...+..-+. +-++..+.+++|... ...++|+||...........-.|+
T Consensus 12 ~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i 80 (266)
T COG1877 12 PYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGI 80 (266)
T ss_pred ccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCc
Confidence 344455677888899988776665554 455778999999887 446999999999888877664444
No 197
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=69.16 E-value=27 Score=34.89 Aligned_cols=62 Identities=16% Similarity=0.202 Sum_probs=33.9
Q ss_pred ehccChhhHHHHHHHHhh--CC-cEEEEcCC-cccHH---HHHHCCeeEEeCCCCC---ccccccccEEEec
Q 038599 277 YAELLPQHKEELVELLKK--DG-ATAMVGDG-INDAP---ALAAVDIGISMGISGS---ALAMESGHVILMS 338 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~--~g-~v~mvGDG-~ND~~---al~~AdvgIa~g~~~~---~~a~~~ad~vl~~ 338 (473)
|..++|..=.++++.+.- .| .|+++|-| .--.| .|..++..+.+-.+.+ ......||+++.-
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 344566666666665542 26 89999997 44333 4445555554321222 2223567887754
No 198
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=68.00 E-value=15 Score=37.92 Aligned_cols=92 Identities=25% Similarity=0.337 Sum_probs=64.1
Q ss_pred eeeEeee-CCeEEEEEEecCccCCchHHHHHHHHhCCCe--EEEEcCCCH-HHHHHHHHHcCCCccceehccChhhHHHH
Q 038599 213 TRGYVYL-GATPVGTFSLSDSCRSGALEAIKDLKSLGIK--SFILAGDSH-AAALYAQDQLDHAFDMVYAELLPQHKEEL 288 (473)
Q Consensus 213 ~vi~va~-d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~--v~mlTGD~~-~~a~~~a~~~gi~~~~v~a~~~P~~K~~~ 288 (473)
..+|+-+ +..+.|-|-. .++.-++.+|-+.+-+ |+-.|+-|. ..+.+-|+++|++...|.-..+|..|.+.
T Consensus 81 ~~vyLK~E~lQpsgSFK~-----RGa~~~~~kla~~~~~~gViasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~ 155 (457)
T KOG1250|consen 81 MPVYLKREDLQPSGSFKI-----RGAGNALQKLAKQQKKAGVIASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQR 155 (457)
T ss_pred CceEEEehhcccccceeh-----hhHHHHHHHHHHhhhcCceEEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHH
Confidence 3445543 4455554443 3788888888877643 666676654 55667789999998889999999999554
Q ss_pred HHHHhhCC-cEEEEcCCcccHHHHH
Q 038599 289 VELLKKDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 289 v~~l~~~g-~v~mvGDG~ND~~al~ 312 (473)
+++.| +|...|+....+-++.
T Consensus 156 ---~~nlGA~Vil~G~~~deAk~~a 177 (457)
T KOG1250|consen 156 ---CRNLGATVILSGEDWDEAKAFA 177 (457)
T ss_pred ---HhccCCEEEEecccHHHHHHHH
Confidence 55668 8999998876655444
No 199
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=66.78 E-value=64 Score=28.27 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=55.4
Q ss_pred eCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEc--CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHh
Q 038599 219 LGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILA--GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLK 293 (473)
Q Consensus 219 ~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT--GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~ 293 (473)
.||.++-+...++- +-.+.|+.+.+.|..+++.| .+.+.+++.+++.++-..-.--.+++-++|.++.+.+.
T Consensus 50 L~G~~l~l~S~R~~---~~~evi~~I~~~G~PviVAtDV~p~P~~V~Kia~~f~A~ly~P~~dlsveeK~~l~~~~~ 123 (138)
T PF04312_consen 50 LDGELLDLKSSRNM---SRSEVIEWISEYGKPVIVATDVSPPPETVKKIARSFNAVLYTPERDLSVEEKQELAREYS 123 (138)
T ss_pred cCCcEEEEEeecCC---CHHHHHHHHHHcCCEEEEEecCCCCcHHHHHHHHHhCCcccCCCCcCCHHHHHHHHHhhC
Confidence 46677766666555 44567788889999999998 45689999999999975333446778899999999875
No 200
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=65.42 E-value=39 Score=33.45 Aligned_cols=62 Identities=13% Similarity=0.244 Sum_probs=35.0
Q ss_pred ehccChhhHHHHHHHHhh--CC-cEEEEcC-CcccHH---HHHHCCeeEEeCCCCCc---cccccccEEEec
Q 038599 277 YAELLPQHKEELVELLKK--DG-ATAMVGD-GINDAP---ALAAVDIGISMGISGSA---LAMESGHVILMS 338 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~--~g-~v~mvGD-G~ND~~---al~~AdvgIa~g~~~~~---~a~~~ad~vl~~ 338 (473)
|.-++|..=.++++.+.- .| .++++|- |+--.| .|.+++..+.+-.+.++ .....||+++..
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 445566666666665542 36 8999999 555444 45455554444212222 223578888754
No 201
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=64.36 E-value=6.4 Score=37.76 Aligned_cols=82 Identities=15% Similarity=0.057 Sum_probs=49.9
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHH------------cCCCccceehccChhhHHHHHHHHhhC-C-cEE
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQ------------LDHAFDMVYAELLPQHKEELVELLKKD-G-ATA 299 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~------------~gi~~~~v~a~~~P~~K~~~v~~l~~~-g-~v~ 299 (473)
-++..++++.|++.|++. ++|+.....+...... .|-. ........|+-=....+.+... . .++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~-~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGK-VIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCc-EecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 468889999998899987 6676543333211122 2221 1123333344334455555432 2 799
Q ss_pred EEcCC-cccHHHHHHCCee
Q 038599 300 MVGDG-INDAPALAAVDIG 317 (473)
Q Consensus 300 mvGDG-~ND~~al~~Advg 317 (473)
||||. .+|..+-+++++-
T Consensus 218 ~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGID 236 (242)
T ss_pred EECCCcHHHHHHHHHCCCe
Confidence 99999 5999999988874
No 202
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=63.72 E-value=74 Score=27.15 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=50.6
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcc--
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGIN-- 306 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~N-- 306 (473)
+-+++.++..+.+ ++ |+.+.+.............+... .+.....+.=..++++.+.+..-+...|-|.|
T Consensus 3 i~~~~~~~~~~~l---~~-~~~v~~~~~~~~~~~~~~l~~~d----~ii~~~~~~~~~~~l~~~~~Lk~I~~~~~G~d~i 74 (133)
T PF00389_consen 3 ITDPLPDEEIERL---EE-GFEVEFCDSPSEEELAERLKDAD----AIIVGSGTPLTAEVLEAAPNLKLISTAGAGVDNI 74 (133)
T ss_dssp ESSS-SHHHHHHH---HH-TSEEEEESSSSHHHHHHHHTTES----EEEESTTSTBSHHHHHHHTT-SEEEESSSSCTTB
T ss_pred EeccCCHHHHHHH---HC-CceEEEeCCCCHHHHHHHhCCCe----EEEEcCCCCcCHHHHhccceeEEEEEcccccCcc
Confidence 4456665555554 44 78888777555544444444433 33333333223456677755557888898988
Q ss_pred cHHHHHHCCeeEEeC
Q 038599 307 DAPALAAVDIGISMG 321 (473)
Q Consensus 307 D~~al~~AdvgIa~g 321 (473)
|..++++-++-++-.
T Consensus 75 d~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 75 DLEAAKERGIPVTNV 89 (133)
T ss_dssp -HHHHHHTTSEEEE-
T ss_pred cHHHHhhCeEEEEEe
Confidence 788999999988864
No 203
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=63.19 E-value=14 Score=37.57 Aligned_cols=60 Identities=25% Similarity=0.330 Sum_probs=48.4
Q ss_pred EEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHHHH
Q 038599 251 SFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPALAA 313 (473)
Q Consensus 251 v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al~~ 313 (473)
|+-.| |.+..-+..-|+++|+....+.-..+|.+|.+-++.+ | .|...||..+|+.+.+.
T Consensus 77 ViaaSaGNHaQGvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~---GaeVil~g~~~dda~~~a~ 138 (347)
T COG1171 77 VIAASAGNHAQGVAYAAKRLGIKATIVMPETTPKIKVDATRGY---GAEVILHGDNFDDAYAAAE 138 (347)
T ss_pred eEEecCCcHHHHHHHHHHHhCCCEEEEecCCCcHHHHHHHHhc---CCEEEEECCCHHHHHHHHH
Confidence 44444 6667777788999999988888999999998877766 6 89999999999876654
No 204
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=61.38 E-value=33 Score=33.04 Aligned_cols=77 Identities=19% Similarity=0.205 Sum_probs=47.6
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHH----HHHHHHHcCCCcc---c-eehccChhhHHHHHHHHhhCC-cEEEEc
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAA----ALYAQDQLDHAFD---M-VYAELLPQHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~----a~~~a~~~gi~~~---~-v~a~~~P~~K~~~v~~l~~~g-~v~mvG 302 (473)
..-||+.|.++..-+.|..+.-+|...... +..=-++.|++.. . ++-+ .-..|...-+..++.- .|+.||
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk-~~k~Ke~R~~~v~k~~~iVm~vG 200 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKK-DKKSKEVRRQAVEKDYKIVMLVG 200 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEee-CCCcHHHHHHHHhhccceeeEec
Confidence 345789999999999999999888766544 3344566777632 1 1111 1122333333333332 899999
Q ss_pred CCcccHH
Q 038599 303 DGINDAP 309 (473)
Q Consensus 303 DG~ND~~ 309 (473)
|..+|=.
T Consensus 201 DNl~DF~ 207 (274)
T COG2503 201 DNLDDFG 207 (274)
T ss_pred Cchhhhc
Confidence 9999844
No 205
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=59.61 E-value=52 Score=28.53 Aligned_cols=73 Identities=11% Similarity=0.014 Sum_probs=48.2
Q ss_pred HhcCCceeeEeee--------------CCeEEEEEEecCccCCchHHHHHHHHhCCC-eE-EEEcCCCH------HHHHH
Q 038599 207 KCTGGKTRGYVYL--------------GATPVGTFSLSDSCRSGALEAIKDLKSLGI-KS-FILAGDSH------AAALY 264 (473)
Q Consensus 207 ~~~~G~~vi~va~--------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi-~v-~mlTGD~~------~~a~~ 264 (473)
+...|+.|+++.. +-.++|+-.+.-.--+..++.++.|+++|+ .+ +++-|-.. ...+.
T Consensus 23 L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~~ 102 (128)
T cd02072 23 FTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVEK 102 (128)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHHH
Confidence 4456666666543 446788777777778888999999999987 44 44444421 22345
Q ss_pred HHHHcCCCccceehccC
Q 038599 265 AQDQLDHAFDMVYAELL 281 (473)
Q Consensus 265 ~a~~~gi~~~~v~a~~~ 281 (473)
..+++|++ .+|..-+
T Consensus 103 ~L~~~Gv~--~vf~pgt 117 (128)
T cd02072 103 RFKEMGFD--RVFAPGT 117 (128)
T ss_pred HHHHcCCC--EEECcCC
Confidence 57788887 7776443
No 206
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=58.92 E-value=48 Score=28.79 Aligned_cols=71 Identities=14% Similarity=0.090 Sum_probs=48.0
Q ss_pred CCeEEEEEEecCccCCchHHHHHHHHhCCC-eE-EEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHH
Q 038599 220 GATPVGTFSLSDSCRSGALEAIKDLKSLGI-KS-FILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVEL 291 (473)
Q Consensus 220 d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi-~v-~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~ 291 (473)
+-..+|+-.+...-.+..++.++.|+++|. .+ +++-|-....-....+++|++ ..++...++++....+..
T Consensus 53 ~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~~Gvd-~~~~~gt~~~~i~~~l~~ 125 (132)
T TIGR00640 53 DVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKEMGVA-EIFGPGTPIPESAIFLLK 125 (132)
T ss_pred CCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHHCCCC-EEECCCCCHHHHHHHHHH
Confidence 445677777777788888999999999886 33 455444444445567889987 245566667776666554
No 207
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=58.63 E-value=4.9 Score=36.46 Aligned_cols=13 Identities=38% Similarity=0.570 Sum_probs=12.2
Q ss_pred EEEcCCCcCCCCc
Q 038599 100 VALDKTGTVTRGE 112 (473)
Q Consensus 100 i~fDKTGTLT~g~ 112 (473)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6999999999988
No 208
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=57.57 E-value=45 Score=33.16 Aligned_cols=88 Identities=24% Similarity=0.316 Sum_probs=57.7
Q ss_pred EEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH---HHcCCCccceehccChhhHHHHHHHHhhC----Cc
Q 038599 225 GTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ---DQLDHAFDMVYAELLPQHKEELVELLKKD----GA 297 (473)
Q Consensus 225 G~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a---~~~gi~~~~v~a~~~P~~K~~~v~~l~~~----g~ 297 (473)
|++-..+.+-|++.|+++.|++.|-+++.+|..+..+-+..+ +++|+. .+-.+--+..=..+..+|++. ++
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~--~v~e~~i~ssa~~~a~ylk~~~~~~k~ 108 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN--SVKEENIFSSAYAIADYLKKRKPFGKK 108 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc--ccCcccccChHHHHHHHHHHhCcCCCe
Confidence 455668999999999999999999889999988766665554 466765 122221122223444555322 36
Q ss_pred EEEEc-CCcccHHHHHHCCe
Q 038599 298 TAMVG-DGINDAPALAAVDI 316 (473)
Q Consensus 298 v~mvG-DG~ND~~al~~Adv 316 (473)
|..+| +|+++ -|++|++
T Consensus 109 Vyvig~~gi~~--eL~~aG~ 126 (306)
T KOG2882|consen 109 VYVIGEEGIRE--ELDEAGF 126 (306)
T ss_pred EEEecchhhhH--HHHHcCc
Confidence 76665 47775 5677775
No 209
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=54.13 E-value=24 Score=31.55 Aligned_cols=41 Identities=17% Similarity=0.105 Sum_probs=37.3
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
-.+||++.+.+++|++. +++++.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 34799999999999955 999999999999999999999876
No 210
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.12 E-value=69 Score=31.77 Aligned_cols=64 Identities=11% Similarity=0.164 Sum_probs=33.6
Q ss_pred ehccChhhHHHHHHHHh--hCC-cEEEEcCCcc-c---HHHHHHCCeeEEeCCCCC-c--cccccccEEEecCC
Q 038599 277 YAELLPQHKEELVELLK--KDG-ATAMVGDGIN-D---APALAAVDIGISMGISGS-A--LAMESGHVILMSND 340 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~--~~g-~v~mvGDG~N-D---~~al~~AdvgIa~g~~~~-~--~a~~~ad~vl~~~~ 340 (473)
|.-++|..=.++++.++ -.| .|..+|.|.. - +..|...+.-+.+-.+.+ + .....||+++..-.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~avG 210 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAAVG 210 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEcCC
Confidence 34455655555555544 226 7899998755 2 234444444443221222 2 23457888886543
No 211
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=53.76 E-value=17 Score=33.02 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=64.1
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHH-HHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHA-AALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAV 314 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~-~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~A 314 (473)
|.-+++..++..+-++.+++=++.. ....+.+.+|+.. ..+.--++++=...++.++..|.-+.+|++.- ....+..
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i-~~~~~~~~~e~~~~i~~~~~~G~~viVGg~~~-~~~A~~~ 142 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI-KIYPYDSEEEIEAAIKQAKAEGVDVIVGGGVV-CRLARKL 142 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE-EEEEESSHHHHHHHHHHHHHTT--EEEESHHH-HHHHHHT
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce-EEEEECCHHHHHHHHHHHHHcCCcEEECCHHH-HHHHHHc
Confidence 3344444444445566666544433 2566667777643 23333468888899999999997788888753 2222333
Q ss_pred CeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHHHHH
Q 038599 315 DIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTKLIQ 360 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 360 (473)
++ ..++..++...+..++.+++++.+..++
T Consensus 143 gl----------------~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 143 GL----------------PGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp TS----------------EEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred CC----------------cEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 32 2455567788899999999998887664
No 212
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=52.38 E-value=1.2e+02 Score=29.27 Aligned_cols=125 Identities=10% Similarity=0.131 Sum_probs=71.6
Q ss_pred HHHHHHHHhCCCeEEEEcCCCH---HHHHHHHHHcCCCccc-eehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH---
Q 038599 238 LEAIKDLKSLGIKSFILAGDSH---AAALYAQDQLDHAFDM-VYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP--- 309 (473)
Q Consensus 238 ~~~I~~L~~~gi~v~mlTGD~~---~~a~~~a~~~gi~~~~-v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~--- 309 (473)
.+.++...+.|.+++++-|+.. ..+..+.++.|+.... ..+-..|++..++++.+.+.+ .+++||=|.-=-+
T Consensus 95 ~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~PkQE~~~ 174 (243)
T PRK03692 95 EALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPKQEIFM 174 (243)
T ss_pred HHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHH
Confidence 3555666677889998855543 1333444444553111 123345778788999999988 8999988854211
Q ss_pred ----HHHHCCeeEEeCCCCCcc---ccccccEEEecCCcccHHHHHHHHHHHHHHHHHHHHH
Q 038599 310 ----ALAAVDIGISMGISGSAL---AMESGHVILMSNDIRKIPKAIKLARKASTKLIQNVTL 364 (473)
Q Consensus 310 ----al~~AdvgIa~g~~~~~~---a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n~~~ 364 (473)
..-...+.+++| ..-|. ...-|.-.+..-++..+..++.+-|+..+.+. +-.|
T Consensus 175 ~~~~~~~~~~v~~gvG-g~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~~R~~~-~~~F 234 (243)
T PRK03692 175 RDCRLVYPDALYMGVG-GTYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRIRRQLR-LLRY 234 (243)
T ss_pred HHHHHhCCCCEEEEeC-eEEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHHHHHHH-HHHH
Confidence 111245555555 11111 12234444455678888888888888544333 4433
No 213
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=52.33 E-value=46 Score=32.02 Aligned_cols=83 Identities=18% Similarity=0.151 Sum_probs=53.2
Q ss_pred CchHHHHHHHHhCCCeEEEEcC-CCHHHHHHHHHHcCCCcccee---------hccChhhHH--HHHHHHhhCC-cEEEE
Q 038599 235 SGALEAIKDLKSLGIKSFILAG-DSHAAALYAQDQLDHAFDMVY---------AELLPQHKE--ELVELLKKDG-ATAMV 301 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTG-D~~~~a~~~a~~~gi~~~~v~---------a~~~P~~K~--~~v~~l~~~g-~v~mv 301 (473)
++..+++++||+.|..+.++|. |... ..+-..+|+. ..| .-..|+.+. ..++.+..+. .++++
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~--~~~l~~~~l~--~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vhI 191 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRL--RLLLLPLGLS--AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVHI 191 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHH--HHHhhccCHH--HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEEe
Confidence 3556999999999988888883 3332 3566666664 222 112354442 2233444444 79999
Q ss_pred cC-CcccHHHHHHCCe-eEEeC
Q 038599 302 GD-GINDAPALAAVDI-GISMG 321 (473)
Q Consensus 302 GD-G~ND~~al~~Adv-gIa~g 321 (473)
|| ..||..+-+.++. ++-+.
T Consensus 192 gD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 192 GDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred cCccccccHhHHHcCCEEEEEc
Confidence 99 5999999888877 44443
No 214
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=49.91 E-value=68 Score=30.88 Aligned_cols=59 Identities=25% Similarity=0.298 Sum_probs=43.4
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHH----------HHHHHHcCCCccce---ehccChhhHHHHHHHHhhCC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAA----------LYAQDQLDHAFDMV---YAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a----------~~~a~~~gi~~~~v---~a~~~P~~K~~~v~~l~~~g 296 (473)
-.++-|+.+|+.|+.+. ||+..... ...++++|++.-++ +-.+++++|.++|+..++.|
T Consensus 42 ~l~eki~la~~~~V~v~--~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~IEiS~G~~~i~~~~~~rlI~~~~~~g 113 (237)
T TIGR03849 42 IVKEKIEMYKDYGIKVY--PGGTLFEIAHSKGKFDEYLNECDELGFEAVEISDGSMEISLEERCNLIERAKDNG 113 (237)
T ss_pred HHHHHHHHHHHcCCeEe--CCccHHHHHHHhhhHHHHHHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCC
Confidence 47788898999887665 88754332 24678888873322 45577899999999999888
No 215
>PF00763 THF_DHG_CYH: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; InterPro: IPR020630 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the N-terminal catalytic domain of these enzymes. ; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 2C2X_B 2C2Y_A 1EDZ_A 1EE9_A 4A26_B 3NGL_C 3NGX_A 1B0A_A 1DIA_A 1A4I_B ....
Probab=49.68 E-value=23 Score=30.07 Aligned_cols=67 Identities=28% Similarity=0.428 Sum_probs=43.4
Q ss_pred cCccCCchHHHHHHHHhCCCeE---EEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhCC
Q 038599 230 SDSCRSGALEAIKDLKSLGIKS---FILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v---~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~g 296 (473)
...++.+.++-++.|++.|+++ ++.-||++.... ..|+++||....+ ..+.+.++-.+.|+.|.+..
T Consensus 9 a~~i~~~l~~~i~~l~~~~~~P~Laii~vg~d~~S~~Y~~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~D~ 86 (117)
T PF00763_consen 9 AKEIKEELKEEIEKLKEKGITPKLAIILVGDDPASISYVRSKQKAAEKLGIEFELIELPEDISEEELLELIEKLNEDP 86 (117)
T ss_dssp HHHHHHHHHHHHHHHHHCT---EEEEEEES--HHHHHHHHHHHHHHHHHT-EEEEEEE-TTSSHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEecCCChhHHHHHHHHHHHHHHcCCceEEEECCCCcCHHHHHHHHHHHhCCC
Confidence 4567788899999999998874 456798876554 5688999974422 24557778888888887663
No 216
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=49.39 E-value=10 Score=33.95 Aligned_cols=26 Identities=23% Similarity=0.438 Sum_probs=22.9
Q ss_pred hhhhcCccEEEEcCCCcCCCCceEEE
Q 038599 91 LEILAKVKMVALDKTGTVTRGEFTVT 116 (473)
Q Consensus 91 lE~lg~vd~i~fDKTGTLT~g~~~V~ 116 (473)
.+.+.+++.++||-.||||.|++-+.
T Consensus 2 ~~ra~~IkLli~DVDGvLTDG~ly~~ 27 (170)
T COG1778 2 IARAKNIKLLILDVDGVLTDGKLYYD 27 (170)
T ss_pred hhhhhhceEEEEeccceeecCeEEEc
Confidence 46788999999999999999998654
No 217
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=49.15 E-value=43 Score=29.83 Aligned_cols=71 Identities=21% Similarity=0.333 Sum_probs=44.2
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc--ChhhH---HHHHHHHhhCC-cE-EEEcCCcccHHHH
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL--LPQHK---EELVELLKKDG-AT-AMVGDGINDAPAL 311 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~--~P~~K---~~~v~~l~~~g-~v-~mvGDG~ND~~al 311 (473)
+.=++|++.|+..+++.||.......++++.|+. .|+.+- .|+++ .++.+.+++.| .+ .+-++..-+...+
T Consensus 57 ~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~i~~~~~~~~~L~~~~~i 134 (165)
T PF00875_consen 57 DLQESLRKLGIPLLVLRGDPEEVLPELAKEYGAT--AVYFNEEYTPYERRRDERVRKALKKHGIKVHTFDDHTLVPPDDI 134 (165)
T ss_dssp HHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTES--EEEEE---SHHHHHHHHHHHHHHHHTTSEEEEE--SSSS-HHHC
T ss_pred HHHHHHHhcCcceEEEecchHHHHHHHHHhcCcC--eeEeccccCHHHHHHHHHHHHHHHhcceEEEEECCcEEEecccc
Confidence 3345667789999999999999999999999988 666554 34433 23344566666 43 3334445444433
No 218
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=48.42 E-value=46 Score=25.89 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=31.8
Q ss_pred EEecCccCCchHHHHHHHHhCCCeEEE-EcCCCHHHHHHHHHHcCCC
Q 038599 227 FSLSDSCRSGALEAIKDLKSLGIKSFI-LAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 227 i~l~d~lr~~a~~~I~~L~~~gi~v~m-lTGD~~~~a~~~a~~~gi~ 272 (473)
+.+.+..++.+.+..+.|++.|+++.+ ..+.+...-..-|.+.|++
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 445566778888889999999998877 4555555555555555554
No 219
>TIGR00603 rad25 DNA repair helicase rad25. All proteins in this family for which functions are known are DNA-DNA helicases used for the initiation of nucleotide excision repair and transacription as part of the TFIIH complex.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=47.09 E-value=1.3e+02 Score=33.95 Aligned_cols=68 Identities=21% Similarity=0.330 Sum_probs=50.6
Q ss_pred hCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC--cEEEE---cC-CcccHHHHHHCCeeEE
Q 038599 246 SLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG--ATAMV---GD-GINDAPALAAVDIGIS 319 (473)
Q Consensus 246 ~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g--~v~mv---GD-G~ND~~al~~AdvgIa 319 (473)
..|-++.+.+ |+...+..+++.+|.+ .+++++++++..++++.++..+ .++++ || |+ | +..|++.|-
T Consensus 494 ~~g~kiLVF~-~~~~~l~~~a~~L~~~--~I~G~ts~~ER~~il~~Fr~~~~i~vLv~SkVgdeGI-D---lP~a~vvI~ 566 (732)
T TIGR00603 494 QRGDKIIVFS-DNVFALKEYAIKLGKP--FIYGPTSQQERMQILQNFQHNPKVNTIFLSKVGDTSI-D---LPEANVLIQ 566 (732)
T ss_pred hcCCeEEEEe-CCHHHHHHHHHHcCCc--eEECCCCHHHHHHHHHHHHhCCCccEEEEeccccccc-C---CCCCCEEEE
Confidence 4677888887 5667799999999976 7899999999999999998654 45554 33 33 2 344666665
Q ss_pred e
Q 038599 320 M 320 (473)
Q Consensus 320 ~ 320 (473)
+
T Consensus 567 ~ 567 (732)
T TIGR00603 567 I 567 (732)
T ss_pred e
Confidence 4
No 220
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=45.36 E-value=1.1e+02 Score=28.02 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=68.2
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-----CCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHH
Q 038599 238 LEAIKDLKSLGIKSFILAGDSHAAALYAQDQL-----DHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPAL 311 (473)
Q Consensus 238 ~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~-----gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al 311 (473)
.+.++...+.|.+++++- ..+..+...++.+ |+.....+.-..|++-.++++.+.+.+ .+++||=|.-=-+..
T Consensus 38 ~~l~~~~~~~~~~vfllG-~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~PkQE~~ 116 (177)
T TIGR00696 38 EELCQRAGKEKLPIFLYG-GKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPKQEIW 116 (177)
T ss_pred HHHHHHHHHcCCeEEEEC-CCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcHhHHH
Confidence 455666677788888884 4444544444433 232112234456777788999999888 888888885432221
Q ss_pred ----H---HCCeeEEeCCCCCcc---ccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 312 ----A---AVDIGISMGISGSAL---AMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 312 ----~---~AdvgIa~g~~~~~~---a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
+ ...+.+++| ..-|. ...-|.-.+..-++..+..++.+-++..+.
T Consensus 117 ~~~~~~~~~~~v~~gvG-g~fd~~aG~~~rAP~w~~~~gLEWlyRl~~eP~R~~R~ 171 (177)
T TIGR00696 117 MRNHRHLKPDAVMIGVG-GSFDVFSGLVKRAPRWLMRLGLEWLYRLRMEPWRWKRM 171 (177)
T ss_pred HHHhHHhCCCcEEEEec-eeeeecccCcCcCCHHHHHhCchHHHHhhhCcHHHHHh
Confidence 1 123444444 11111 123344444556788888888888775554
No 221
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.00 E-value=32 Score=34.03 Aligned_cols=67 Identities=15% Similarity=0.215 Sum_probs=48.0
Q ss_pred ecCccCCchHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIK---SFILAGDSHAAAL------YAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.++++++.++.++.|++.|++ ..++-||++.... ..|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~d 86 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSVEHHLPATTTQAELLALIARLNAD 86 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3467788999999999988886 4466788876554 66789999854332 334666777777777665
No 222
>PF05374 Mu-conotoxin: Mu-Conotoxin; InterPro: IPR008036 This entry represents Mu-type conotoxins. Cone snail toxins, conotoxins, are small peptides with disulphide connectivity, that target ion-channels or G-protein coupled receptors. Based on the number and pattern of disulphide bonds and biological activities, conotoxins can be classified into several families []. Omega, delta and kappa families of conotoxins have a knottin or inhibitor cystine knot scaffold. The knottin scaffold is a very special disulphide through disulphide knot, in which the III-VI disulphide bond crosses the macrocycle formed by two other disulphide bonds (I-IV and II-V) and the interconnecting backbone segments, where I-VI indicates the six cysteine residues starting from the N terminus. The disulphide bonding network as well as specific amino acids in inter-cysteine loops provide specificity of conotoxin []. The cysteine arrangement is the same for omega, delta and kappa families, but omega conotoxins are calcium channel blockers, whereas delta conotoxins delay the inactivation of sodium channels and kappa conotoxins are potassium channel blockers []. Mu conotoxins have two types of cysteine arrangement, but the knottin scaffold is not observed. Conotoxin gm9a, a putative 27-residue polypeptide encoded by Conus gloriamaris, has been shown to adopt an inhibitory cystine knot motif constrained by three disulphide bonds [, ].Mu conotoxins target the voltage-gated sodium channels, preferential skeletal muscle [], and are useful probes for investigating voltage-dependent sodium channels of excitable tissues []. Alpha conotoxins have two types of cysteine arrangement [] and are competitive nicotinic acetylcholine receptor antagonists. ; GO: 0019871 sodium channel inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1R9I_A 1GIB_A 1TCJ_A 1TCG_A 1TCK_A 1TCH_A.
Probab=44.39 E-value=11 Score=21.67 Aligned_cols=11 Identities=36% Similarity=0.860 Sum_probs=8.4
Q ss_pred ccccCCCCccC
Q 038599 460 QGQTGPNPCCF 470 (473)
Q Consensus 460 ~~~~~~~~~~~ 470 (473)
--||.|+.||-
T Consensus 12 sR~CkP~~CC~ 22 (22)
T PF05374_consen 12 SRQCKPQRCCA 22 (22)
T ss_dssp SGGGTSSTTT-
T ss_pred ccccccccccC
Confidence 35799999993
No 223
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=43.84 E-value=35 Score=28.76 Aligned_cols=39 Identities=15% Similarity=0.265 Sum_probs=29.6
Q ss_pred CCchHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHcCCC
Q 038599 234 RSGALEAIKDLKSLGIK-SFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~-v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.+.+.+.++++.+.|++ +++.+|.....+...+++.|+.
T Consensus 65 ~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 65 PDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred HHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 44678999999999998 8889999899999999999985
No 224
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=43.71 E-value=2.2e+02 Score=27.82 Aligned_cols=91 Identities=19% Similarity=0.216 Sum_probs=56.3
Q ss_pred ecCccCCchHHHHHHHHhCCCeE-EEEcCCC-HHHHHHHHHHcC-CCccceehc--------cChhhHHHHHHHHhhCC-
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKS-FILAGDS-HAAALYAQDQLD-HAFDMVYAE--------LLPQHKEELVELLKKDG- 296 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v-~mlTGD~-~~~a~~~a~~~g-i~~~~v~a~--------~~P~~K~~~v~~l~~~g- 296 (473)
+-|-+-++..+.++.+++.|+.. .+++=.. .+....+++... +. .+.++ ..+++-.++++.+++.-
T Consensus 125 ipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFI--Y~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~ 202 (263)
T CHL00200 125 IPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCI--YLVSTTGVTGLKTELDKKLKKLIETIKKMTN 202 (263)
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcE--EEEcCCCCCCCCccccHHHHHHHHHHHHhcC
Confidence 45666688999999999999984 4566554 455666776664 32 22121 12455667777777753
Q ss_pred cEEEEcCCcccHH---HHHHCCe-eEEeC
Q 038599 297 ATAMVGDGINDAP---ALAAVDI-GISMG 321 (473)
Q Consensus 297 ~v~mvGDG~ND~~---al~~Adv-gIa~g 321 (473)
.-.++|=|+|+.. .+..++. |+.+|
T Consensus 203 ~Pi~vGFGI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 203 KPIILGFGISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred CCEEEECCcCCHHHHHHHHhcCCCEEEEC
Confidence 4456799999544 4443322 55554
No 225
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.63 E-value=52 Score=32.86 Aligned_cols=60 Identities=13% Similarity=0.215 Sum_probs=34.0
Q ss_pred ehccChhhHHHHHHHHhh--CC-cEEEEcCCcc----cHHHHHH------CCeeEEeCCCCCc---cccccccEEEec
Q 038599 277 YAELLPQHKEELVELLKK--DG-ATAMVGDGIN----DAPALAA------VDIGISMGISGSA---LAMESGHVILMS 338 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~--~g-~v~mvGDG~N----D~~al~~------AdvgIa~g~~~~~---~a~~~ad~vl~~ 338 (473)
|.-++|..=.++++.++- .| .|..+|.+.. =+-.|.+ |-|.++. +.+. .....||+++.-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvch--s~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCH--SRTDDLAAKTRRADIVVAA 211 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeC--CCCCCHHHHHhhCCEEEEc
Confidence 344667666666666543 36 8899998743 1223433 3455554 3332 233578888863
No 226
>PLN02423 phosphomannomutase
Probab=43.29 E-value=46 Score=32.01 Aligned_cols=45 Identities=13% Similarity=0.196 Sum_probs=34.5
Q ss_pred eeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 038599 214 RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAA 262 (473)
Q Consensus 214 vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a 262 (473)
++++-.||+++- =..++.+...++|++|++. +++++.||......
T Consensus 9 i~~~D~DGTLl~---~~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~ 53 (245)
T PLN02423 9 IALFDVDGTLTA---PRKEATPEMLEFMKELRKV-VTVGVVGGSDLSKI 53 (245)
T ss_pred EEEEeccCCCcC---CCCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHH
Confidence 444677888762 2335778899999999987 99999999976654
No 227
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.20 E-value=39 Score=33.44 Aligned_cols=67 Identities=22% Similarity=0.173 Sum_probs=48.6
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCccceeh--ccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDMVYA--ELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v~a--~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++-++.+++. |++ .+++-||++.... ..++++||....+.- +.++++-.+.++.|.+.
T Consensus 11 ~a~~i~~~~~~~i~~~~~~~~~~p~L~~i~vg~~~~s~~Y~~~~~~~~~~~Gi~~~~~~l~~~~~~~~l~~~i~~Ln~d 89 (283)
T PRK14192 11 LAKQIEEELSVRVEALKAKTGRTPILATILVGDDPASATYVRMKGNACRRVGMDSLKVELPQETTTEQLLAKIEELNAN 89 (283)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3567888999999999877 765 3566788876654 567899998543333 45677777888888766
No 228
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.00 E-value=53 Score=32.53 Aligned_cols=63 Identities=14% Similarity=0.181 Sum_probs=32.4
Q ss_pred ehccChhhHHHHHHHHhh--CC-cEEEEcCCcc----cHHHHHHCCeeEEeCCCCC-cc--ccccccEEEecC
Q 038599 277 YAELLPQHKEELVELLKK--DG-ATAMVGDGIN----DAPALAAVDIGISMGISGS-AL--AMESGHVILMSN 339 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~--~g-~v~mvGDG~N----D~~al~~AdvgIa~g~~~~-~~--a~~~ad~vl~~~ 339 (473)
|.-++|..=.++++.+.- +| .|..+|.+.. =+..|...+..+.+-.+.+ +. ....||+++..-
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~Av 207 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAV 207 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEcc
Confidence 345566666666666542 36 7888888633 1224444333333221233 21 235678877543
No 229
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=42.41 E-value=54 Score=31.73 Aligned_cols=65 Identities=20% Similarity=0.216 Sum_probs=43.7
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHH----------HHHHHHcCCCccce---ehccChhhHHHHHHHHhhCC-cE-EE
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAA----------LYAQDQLDHAFDMV---YAELLPQHKEELVELLKKDG-AT-AM 300 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a----------~~~a~~~gi~~~~v---~a~~~P~~K~~~v~~l~~~g-~v-~m 300 (473)
-.++-|+..|+.|+.+. +|...... ...++++|++.-++ +-.+++++|.++|+..++.| +| --
T Consensus 55 ~l~eki~l~~~~gV~v~--~GGtl~E~a~~q~~~~~yl~~~k~lGf~~IEiSdGti~l~~~~r~~~I~~~~~~Gf~v~~E 132 (244)
T PF02679_consen 55 ILKEKIDLAHSHGVYVY--PGGTLFEVAYQQGKFDEYLEECKELGFDAIEISDGTIDLPEEERLRLIRKAKEEGFKVLSE 132 (244)
T ss_dssp HHHHHHHHHHCTT-EEE--E-HHHHHHHHHTT-HHHHHHHHHHCT-SEEEE--SSS---HHHHHHHHHHHCCTTSEEEEE
T ss_pred HHHHHHHHHHHcCCeEe--CCcHHHHHHHhcChHHHHHHHHHHcCCCEEEecCCceeCCHHHHHHHHHHHHHCCCEEeec
Confidence 37889999999887665 77765443 36678889873222 34577999999999999999 44 55
Q ss_pred Ec
Q 038599 301 VG 302 (473)
Q Consensus 301 vG 302 (473)
+|
T Consensus 133 vG 134 (244)
T PF02679_consen 133 VG 134 (244)
T ss_dssp ES
T ss_pred cc
Confidence 76
No 230
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=42.37 E-value=1.5e+02 Score=24.90 Aligned_cols=68 Identities=19% Similarity=0.207 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCCeEEEEc-CCCH-------HHHHHHHHHcCCCcc---ceehccChhhHHHHHHHHhhCC-cE-EEEcCC
Q 038599 238 LEAIKDLKSLGIKSFILA-GDSH-------AAALYAQDQLDHAFD---MVYAELLPQHKEELVELLKKDG-AT-AMVGDG 304 (473)
Q Consensus 238 ~~~I~~L~~~gi~v~mlT-GD~~-------~~a~~~a~~~gi~~~---~v~a~~~P~~K~~~v~~l~~~g-~v-~mvGDG 304 (473)
.+-++++++.|++.+|.- .|.+ ..-...|+++||.-- ..+..+++++=..+.+.|.+.. +| ++|.-|
T Consensus 17 ~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~~~~~~~v~~f~~~l~~~~~Pvl~hC~sG 96 (110)
T PF04273_consen 17 PEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGGAITEEDVEAFADALESLPKPVLAHCRSG 96 (110)
T ss_dssp HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TTT--HHHHHHHHHHHHTTTTSEEEE-SCS
T ss_pred HHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCCCCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 466788999999977653 3422 123478899998611 2235667777777777787654 55 666655
Q ss_pred c
Q 038599 305 I 305 (473)
Q Consensus 305 ~ 305 (473)
.
T Consensus 97 ~ 97 (110)
T PF04273_consen 97 T 97 (110)
T ss_dssp H
T ss_pred h
Confidence 4
No 231
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=42.27 E-value=1.1e+02 Score=25.54 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=44.3
Q ss_pred EEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 226 TFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
++.+.|.-|++..+.++.|.+.|++++ .|+ .|+..+. +.|+....+. .+....++..+++.+++.
T Consensus 4 lisv~~~dk~~~~~~a~~l~~~G~~i~-aT~---gTa~~L~-~~gi~~~~v~~~~~~~~~~~~~i~~~i~~~ 70 (116)
T cd01423 4 LISIGSYSKPELLPTAQKLSKLGYKLY-ATE---GTADFLL-ENGIPVTPVAWPSEEPQNDKPSLRELLAEG 70 (116)
T ss_pred EEecCcccchhHHHHHHHHHHCCCEEE-Ecc---HHHHHHH-HcCCCceEeeeccCCCCCCchhHHHHHHcC
Confidence 455677788999999999999999986 454 5666665 7888644432 111223457777777764
No 232
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=41.38 E-value=3.8e+02 Score=26.82 Aligned_cols=43 Identities=26% Similarity=0.216 Sum_probs=28.6
Q ss_pred ceehccChhhHHHHHHHHhhCC-cEEEEcCCcc-cHHHHHHCCee
Q 038599 275 MVYAELLPQHKEELVELLKKDG-ATAMVGDGIN-DAPALAAVDIG 317 (473)
Q Consensus 275 ~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~N-D~~al~~Advg 317 (473)
.+.+..+|.=--.+++..+-.. +++||||..| |..--+..+..
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~ 264 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFK 264 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcc
Confidence 5666666655555666666555 8999999976 65555555554
No 233
>PTZ00445 p36-lilke protein; Provisional
Probab=41.22 E-value=51 Score=31.22 Aligned_cols=69 Identities=20% Similarity=0.117 Sum_probs=47.5
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC--CccceehccChhhHHHHHHHHhhCC-cEEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDH--AFDMVYAELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi--~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
..++.+...++.|++.||+++..-=|+...+.+-.....- +...+...++|+=|. +++.+++.| .|+.|
T Consensus 26 ~~~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~-~~~~l~~~~I~v~VV 97 (219)
T PTZ00445 26 NPHESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKI-LGKRLKNSNIKISVV 97 (219)
T ss_pred CHHHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHH-HHHHHHHCCCeEEEE
Confidence 3466778889999999999999877776555443332222 122566678888775 788888887 66555
No 234
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=40.79 E-value=40 Score=33.38 Aligned_cols=67 Identities=18% Similarity=0.259 Sum_probs=46.7
Q ss_pred ecCccCCchHHHHHHHHhCCCe---EEEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIK---SFILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++-++.|++.|++ ..++.||++.... ..|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 87 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNED 87 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3566788999999999988876 4567798876654 5678999974422 2333455666777777655
No 235
>KOG1123 consensus RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 3'-5' helicase subunit SSL2 [Transcription; Replication, recombination and repair]
Probab=39.99 E-value=1.8e+02 Score=31.28 Aligned_cols=90 Identities=16% Similarity=0.228 Sum_probs=71.1
Q ss_pred EEEecCccCCchHHHHHHHHh-CCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC--cEEE--
Q 038599 226 TFSLSDSCRSGALEAIKDLKS-LGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG--ATAM-- 300 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~-~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g--~v~m-- 300 (473)
++.+.+|-+-.+=+.+=..++ .|-++++.+ ||.-+-.+-|-++|-+ -+++..+..+..+|++.+|-.. .+.+
T Consensus 520 lLyvMNP~KFraCqfLI~~HE~RgDKiIVFs-DnvfALk~YAikl~Kp--fIYG~Tsq~ERm~ILqnFq~n~~vNTIFlS 596 (776)
T KOG1123|consen 520 LLYVMNPNKFRACQFLIKFHERRGDKIIVFS-DNVFALKEYAIKLGKP--FIYGPTSQNERMKILQNFQTNPKVNTIFLS 596 (776)
T ss_pred eeeecCcchhHHHHHHHHHHHhcCCeEEEEe-ccHHHHHHHHHHcCCc--eEECCCchhHHHHHHHhcccCCccceEEEe
Confidence 566778888888777766665 477777766 9999999999999988 8999999999999999999774 3444
Q ss_pred -EcCCcccHHHHHHCCeeEEeC
Q 038599 301 -VGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 301 -vGDG~ND~~al~~AdvgIa~g 321 (473)
|||-.-|.| +|+|=|-+.
T Consensus 597 KVgDtSiDLP---EAnvLIQIS 615 (776)
T KOG1123|consen 597 KVGDTSIDLP---EANVLIQIS 615 (776)
T ss_pred eccCccccCC---cccEEEEEc
Confidence 688888844 678877664
No 236
>PLN02645 phosphoglycolate phosphatase
Probab=39.93 E-value=52 Score=32.84 Aligned_cols=58 Identities=16% Similarity=0.094 Sum_probs=35.5
Q ss_pred HHHHHhhCC-cEEEEcCCc-ccHHHHHHCCe-eEEeCCCCC---cc-cc----ccccEEEecCCcccHHHHH
Q 038599 288 LVELLKKDG-ATAMVGDGI-NDAPALAAVDI-GISMGISGS---AL-AM----ESGHVILMSNDIRKIPKAI 348 (473)
Q Consensus 288 ~v~~l~~~g-~v~mvGDG~-ND~~al~~Adv-gIa~g~~~~---~~-a~----~~ad~vl~~~~l~~l~~~i 348 (473)
.++.+.-.. .++||||.. +|..+-+.|++ +|.+. +|. +. .. ..+|+++ +++..+..++
T Consensus 239 a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~-~G~~~~~~~~~~~~~~~pd~~~--~~~~~l~~~~ 307 (311)
T PLN02645 239 LANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVL-SGVTSESMLLSPENKIQPDFYT--SKISDFLTLK 307 (311)
T ss_pred HHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEc-CCCCCHHHHHhccCCCCCCEEE--CCHHHHHHHh
Confidence 333443333 799999997 99999999997 33332 331 11 11 3467777 6666665543
No 237
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=39.75 E-value=67 Score=25.38 Aligned_cols=48 Identities=17% Similarity=0.129 Sum_probs=36.3
Q ss_pred EEEEecC---ccCCchHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCCC
Q 038599 225 GTFSLSD---SCRSGALEAIKDLKSLGIKSFIL-AGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 225 G~i~l~d---~lr~~a~~~I~~L~~~gi~v~ml-TGD~~~~a~~~a~~~gi~ 272 (473)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|++
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4556666 67788889999999999988876 555666666777777776
No 238
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=39.54 E-value=50 Score=31.41 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=60.3
Q ss_pred EEEEecCccCCch--HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc---------------ceehccChh--hH
Q 038599 225 GTFSLSDSCRSGA--LEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD---------------MVYAELLPQ--HK 285 (473)
Q Consensus 225 G~i~l~d~lr~~a--~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~---------------~v~a~~~P~--~K 285 (473)
|.+.+++ ++||- ++.+-.|+..+ -++.|.-...-|.++-+++||..- .+.+..+|+ +|
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~ 168 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEK 168 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHH
Confidence 4556777 88875 66666666554 788898888899999999999731 233333333 33
Q ss_pred HHHHHHHhhCCcEEEEcCCcccHHHHHHCCe
Q 038599 286 EELVELLKKDGATAMVGDGINDAPALAAVDI 316 (473)
Q Consensus 286 ~~~v~~l~~~g~v~mvGDG~ND~~al~~Adv 316 (473)
+--+..+..-+++.++-|..+...+-++-+.
T Consensus 169 a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl 199 (244)
T KOG3109|consen 169 AMKVAGIDSPRNTYFFDDSERNIQTAKEVGL 199 (244)
T ss_pred HHHHhCCCCcCceEEEcCchhhHHHHHhccc
Confidence 3333333333589999999999888777665
No 239
>PRK06381 threonine synthase; Validated
Probab=39.28 E-value=91 Score=31.14 Aligned_cols=70 Identities=14% Similarity=0.134 Sum_probs=48.5
Q ss_pred chHHHHHHHHhCCCeEEE--EcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 236 GALEAIKDLKSLGIKSFI--LAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~m--lTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
.+...+..+++.|.+.++ -||..-......|+.+|+.-..+...-.|+.|. +.++..| .|..+++...|+
T Consensus 50 ~a~~~l~~a~~~g~~~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~---~~l~~~GA~V~~~~~~~~~~ 122 (319)
T PRK06381 50 IAEAHVRRAMRLGYSGITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRV---KEMEKYGAEIIYVDGKYEEA 122 (319)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHH---HHHHHcCCEEEEcCCCHHHH
Confidence 456777888888877554 456666666788899999855455555566665 4566678 899998755543
No 240
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=39.13 E-value=1.1e+02 Score=28.32 Aligned_cols=83 Identities=22% Similarity=0.327 Sum_probs=49.2
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc------cceeh---ccChhhHH---HHHHHHhhCC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF------DMVYA---ELLPQHKE---ELVELLKKDG 296 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~------~~v~a---~~~P~~K~---~~v~~l~~~g 296 (473)
+.-++-||+.++|++-++.|+++++-|..+-.. +++=+.. ..+|+ +.+-..|. ...+-...-|
T Consensus 100 lkahlypDav~~ik~wk~~g~~vyiYSSGSV~A-----QkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iG 174 (229)
T COG4229 100 LKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKA-----QKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIG 174 (229)
T ss_pred cccccCHhHHHHHHHHHHcCCcEEEEcCCCchh-----HHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcC
Confidence 467889999999999999999999988666432 1221110 01111 11222222 2222222333
Q ss_pred ----cEEEEcCCcccHHHHHHCCe
Q 038599 297 ----ATAMVGDGINDAPALAAVDI 316 (473)
Q Consensus 297 ----~v~mvGDG~ND~~al~~Adv 316 (473)
.+++.-|-.+...|.+.+++
T Consensus 175 l~p~eilFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 175 LPPAEILFLSDNPEELKAAAGVGL 198 (229)
T ss_pred CCchheEEecCCHHHHHHHHhcch
Confidence 69999999998776555443
No 241
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.06 E-value=45 Score=33.03 Aligned_cols=66 Identities=26% Similarity=0.207 Sum_probs=47.2
Q ss_pred cCccCCchHHHHHHHHhCCCeE---EEEcCCCHHHHH------HHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 230 SDSCRSGALEAIKDLKSLGIKS---FILAGDSHAAAL------YAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v---~mlTGD~~~~a~------~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
.+.++++.++-+++|++.|++. +++-||++.... ..|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D 86 (282)
T PRK14166 10 SAKIKEELKEKNQFLKSKGIESCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENTTQNELLALINTLNHD 86 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567888999999999888764 566788876554 66789999754332 335667777777777655
No 242
>PLN02565 cysteine synthase
Probab=38.99 E-value=1.1e+02 Score=30.79 Aligned_cols=68 Identities=7% Similarity=0.109 Sum_probs=47.0
Q ss_pred chHHHHHHHHhCCC-----e-EEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcc
Q 038599 236 GALEAIKDLKSLGI-----K-SFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGIN 306 (473)
Q Consensus 236 ~a~~~I~~L~~~gi-----~-v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~N 306 (473)
.+...+..+.+.|. + ++-.| |..-......|+.+|+....+..+-.|..|.+.++.+ | .|..+++..+
T Consensus 49 ~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~---GA~V~~~~~~~~ 124 (322)
T PLN02565 49 IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAF---GAELVLTDPAKG 124 (322)
T ss_pred HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHc---CCEEEEeCCCCC
Confidence 56667777777765 3 44454 5555566788899999866666667788897776655 7 7888887443
No 243
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.81 E-value=65 Score=31.94 Aligned_cols=62 Identities=10% Similarity=0.157 Sum_probs=33.3
Q ss_pred ehccChhhHHHHHHHHhh--CC-cEEEEcCCcc-c---HHHHHH--CCeeEEeCCCCCcc--ccccccEEEecC
Q 038599 277 YAELLPQHKEELVELLKK--DG-ATAMVGDGIN-D---APALAA--VDIGISMGISGSAL--AMESGHVILMSN 339 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~--~g-~v~mvGDG~N-D---~~al~~--AdvgIa~g~~~~~~--a~~~ad~vl~~~ 339 (473)
|.-++|..=.++++.++- .| .|+.+|.|.. - +..|.. |.|-+... ...+. ....||+++..-
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~Av 208 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCVGV 208 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEEec
Confidence 344567666666666543 26 8999999822 1 223333 44455442 12222 235678877543
No 244
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=38.46 E-value=1.1e+02 Score=25.58 Aligned_cols=51 Identities=16% Similarity=0.233 Sum_probs=34.7
Q ss_pred eEEEEEEecCccCCchHHHHHHHHhCCC-e-EEEEcCCCHHHHHHHHHHcCCC
Q 038599 222 TPVGTFSLSDSCRSGALEAIKDLKSLGI-K-SFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 222 ~~lG~i~l~d~lr~~a~~~I~~L~~~gi-~-v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.++|+-...+.--+.+++.++.+|+.+- . .+++-|-....-...+++.|.+
T Consensus 52 dvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~~~G~D 104 (119)
T cd02067 52 DAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLKEIGVD 104 (119)
T ss_pred CEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHHHcCCe
Confidence 4566666656666788888888888875 4 4566666554434577888876
No 245
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=37.21 E-value=1.5e+02 Score=27.49 Aligned_cols=15 Identities=7% Similarity=0.109 Sum_probs=11.1
Q ss_pred CHHHHHHHHHHcCCC
Q 038599 258 SHAAALYAQDQLDHA 272 (473)
Q Consensus 258 ~~~~a~~~a~~~gi~ 272 (473)
+...++.+|+.+|++
T Consensus 46 ~~e~~~~~A~~lgip 60 (194)
T cd01994 46 NHELLELQAEAMGIP 60 (194)
T ss_pred CHHHHHHHHHHcCCc
Confidence 556777778888877
No 246
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=36.51 E-value=1.6e+02 Score=24.51 Aligned_cols=62 Identities=15% Similarity=0.160 Sum_probs=43.3
Q ss_pred EEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChh-hHHHHHHHHhh
Q 038599 226 TFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQ-HKEELVELLKK 294 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~-~K~~~v~~l~~ 294 (473)
++.+.|.-|++..+.++.|.+.|++++ .|+ .|+..+. +.|++...+..- ++ ...++.+.+++
T Consensus 3 ~isv~d~~K~~~~~~a~~l~~~G~~i~-AT~---gTa~~L~-~~Gi~~~~v~~~--~~~g~~~i~~~i~~ 65 (112)
T cd00532 3 FLSVSDHVKAMLVDLAPKLSSDGFPLF-ATG---GTSRVLA-DAGIPVRAVSKR--HEDGEPTVDAAIAE 65 (112)
T ss_pred EEEEEcccHHHHHHHHHHHHHCCCEEE-ECc---HHHHHHH-HcCCceEEEEec--CCCCCcHHHHHHhC
Confidence 567889999999999999999999986 565 3555554 488874333221 22 34567777766
No 247
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=36.02 E-value=62 Score=27.10 Aligned_cols=37 Identities=16% Similarity=0.183 Sum_probs=28.6
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
-++..++++.++++|++++.+|++.. -...+.+.|..
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~~ 92 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGVP 92 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCCc
Confidence 45788899999999999999998774 34456655654
No 248
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=36.01 E-value=2.7e+02 Score=28.24 Aligned_cols=104 Identities=10% Similarity=0.069 Sum_probs=63.4
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---hh
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---PQ 283 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P~ 283 (473)
..+-|..++++..+..- -.-.+..+++++.|.+. ..++++-.-.......+|+..+++ .|-+.-. |-
T Consensus 68 ~~~LGg~~i~l~~~~ss-------~~kgEsl~DTarvls~y-~D~iv~R~~~~~~~~~~a~~~~vP--VINa~~~~~HPt 137 (334)
T PRK01713 68 AYDQGAQVTYIDPNSSQ-------IGHKESMKDTARVLGRM-YDAIEYRGFKQSIVNELAEYAGVP--VFNGLTDEFHPT 137 (334)
T ss_pred HHHcCCeEEEcCCcccc-------CCCCcCHHHHHHHHHHh-CCEEEEEcCchHHHHHHHHhCCCC--EEECCCCCCChH
Confidence 34556666665322211 12256778888888887 788888888888999999999987 5555322 22
Q ss_pred ----hHHHHHHHHh--hCC-cEEEEcCCcc-----cHHHHHHCCeeEEe
Q 038599 284 ----HKEELVELLK--KDG-ATAMVGDGIN-----DAPALAAVDIGISM 320 (473)
Q Consensus 284 ----~K~~~v~~l~--~~g-~v~mvGDG~N-----D~~al~~AdvgIa~ 320 (473)
|-..+.+... -+| +++++||+.| ...+++.-++-+.+
T Consensus 138 QaL~Dl~Ti~e~~g~~l~gl~ia~vGD~~~~v~~Sl~~~~~~~g~~v~~ 186 (334)
T PRK01713 138 QMLADVLTMIENCDKPLSEISYVYIGDARNNMGNSLLLIGAKLGMDVRI 186 (334)
T ss_pred HHHHHHHHHHHHcCCCcCCcEEEEECCCccCHHHHHHHHHHHcCCEEEE
Confidence 3333333332 236 8999999844 33444444444443
No 249
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=35.92 E-value=2.9e+02 Score=25.19 Aligned_cols=82 Identities=21% Similarity=0.248 Sum_probs=47.1
Q ss_pred chHHHHHHHHhCCCeEEE--EcCCCHHHHHHHHHHcCCCccceehc--cChh-----hHHHHHHHHhh-CC-cEEEEcCC
Q 038599 236 GALEAIKDLKSLGIKSFI--LAGDSHAAALYAQDQLDHAFDMVYAE--LLPQ-----HKEELVELLKK-DG-ATAMVGDG 304 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~m--lTGD~~~~a~~~a~~~gi~~~~v~a~--~~P~-----~K~~~v~~l~~-~g-~v~mvGDG 304 (473)
...+.++.+++.|+++.+ ++-++...+.. +.+.|.+ .+.-. ..+. .-.+.++.+++ .+ .+...| |
T Consensus 91 ~~~~~i~~~~~~g~~~~v~~~~~~t~~e~~~-~~~~~~d--~v~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~G-G 166 (202)
T cd04726 91 TIKKAVKAAKKYGKEVQVDLIGVEDPEKRAK-LLKLGVD--IVILHRGIDAQAAGGWWPEDDLKKVKKLLGVKVAVAG-G 166 (202)
T ss_pred HHHHHHHHHHHcCCeEEEEEeCCCCHHHHHH-HHHCCCC--EEEEcCcccccccCCCCCHHHHHHHHhhcCCCEEEEC-C
Confidence 467889999999999875 67777777766 6666665 32211 1111 12344555544 23 454444 6
Q ss_pred cc--cHHHHHHCCe-eEEeC
Q 038599 305 IN--DAPALAAVDI-GISMG 321 (473)
Q Consensus 305 ~N--D~~al~~Adv-gIa~g 321 (473)
+| ++..+.++++ ++.+|
T Consensus 167 I~~~~i~~~~~~Gad~vvvG 186 (202)
T cd04726 167 ITPDTLPEFKKAGADIVIVG 186 (202)
T ss_pred cCHHHHHHHHhcCCCEEEEe
Confidence 65 4555555544 56565
No 250
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=35.29 E-value=75 Score=36.90 Aligned_cols=71 Identities=11% Similarity=0.047 Sum_probs=52.4
Q ss_pred chhHHHHhcCCceeeEeeeCCeEEEEEEecC-----------ccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHH
Q 038599 201 DSIAEAKCTGGKTRGYVYLGATPVGTFSLSD-----------SCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQ 268 (473)
Q Consensus 201 ~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d-----------~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~ 268 (473)
......|.+...+.+++-+||+++.+..--+ .+-++..++++.|.+. +..|+++||........+-..
T Consensus 580 ~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 580 EDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred HHHHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 3345667777778999999999987543222 1336778888888875 678999999999998887766
Q ss_pred cCC
Q 038599 269 LDH 271 (473)
Q Consensus 269 ~gi 271 (473)
+++
T Consensus 660 ~~L 662 (934)
T PLN03064 660 FDM 662 (934)
T ss_pred CCc
Confidence 544
No 251
>PRK06450 threonine synthase; Validated
Probab=35.21 E-value=1.4e+02 Score=30.41 Aligned_cols=73 Identities=19% Similarity=0.134 Sum_probs=51.5
Q ss_pred chHHHHHHHHhCCCe-EEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHHH
Q 038599 236 GALEAIKDLKSLGIK-SFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPAL 311 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~-v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~al 311 (473)
++.-.|..+++.|.+ ++..| |..-......|+.+|+....+..+-.|..|...++. .| .|..++....|+..+
T Consensus 84 ga~~~i~~a~~~g~~~vv~aSsGN~g~slA~~aa~~G~~~~i~vP~~~~~~k~~~i~~---~GA~vi~v~~~~~~~~~~ 159 (338)
T PRK06450 84 GSVTLISYLAEKGIKQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQIES---YGAEVVRVRGSREDVAKA 159 (338)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHH---cCCEEEEECCCHHHHHHH
Confidence 466678888888876 44555 555666778889999986555666678888766554 57 888888776665443
No 252
>PRK08813 threonine dehydratase; Provisional
Probab=35.07 E-value=1.1e+02 Score=31.17 Aligned_cols=71 Identities=21% Similarity=0.161 Sum_probs=48.8
Q ss_pred chHHHHHHHHhCCCe--EEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 236 GALEAIKDLKSLGIK--SFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~--v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
++.-.+..+.+.|.. ++-.| |..-......|+.+|+.-..+..+-.|..|.+.++. .| .|..+|+...|+.
T Consensus 67 gA~~~l~~a~~~~~~~~VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~---~GAeVv~~g~~~~~a~ 141 (349)
T PRK08813 67 GALNALLAGLERGDERPVICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAH---WGATVRQHGNSYDEAY 141 (349)
T ss_pred HHHHHHHHHHHcCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHH---cCCEEEEECCCHHHHH
Confidence 455666677776653 44444 555566678889999986666667778888776654 47 7888887766654
No 253
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=34.57 E-value=2.3e+02 Score=26.74 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHcCCCccceehccC---hhh---HHHHHHHHhhCC-cEEEEcCCc
Q 038599 256 GDSHAAALYAQDQLDHAFDMVYAELL---PQH---KEELVELLKKDG-ATAMVGDGI 305 (473)
Q Consensus 256 GD~~~~a~~~a~~~gi~~~~v~a~~~---P~~---K~~~v~~l~~~g-~v~mvGDG~ 305 (473)
+.+...++.+|+.+|++ ...-+.+ +.. -...++.++++| .....||-.
T Consensus 42 ~~~~~~~~~~A~~lgip--~~~i~~~~~~~~~~~~l~~~l~~~~~~g~~~vv~G~i~ 96 (218)
T TIGR03679 42 TPNIELTRLQAEALGIP--LVKIETSGEKEKEVEDLKGALKELKREGVEGIVTGAIA 96 (218)
T ss_pred CCCHHHHHHHHHHhCCC--EEEEECCCCChHHHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 44667888999999997 3333332 222 233344455556 666666643
No 254
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=34.53 E-value=58 Score=32.32 Aligned_cols=84 Identities=17% Similarity=0.295 Sum_probs=53.7
Q ss_pred ecCccCCchHHHHHHHHhCCCeE---EEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhCCc
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKS---FILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKDGA 297 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v---~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~g~ 297 (473)
+.+.++++.++.++.|++.|++. .++-||++.... ..|+++||..+.+ -.+.+.++-.+.|+.|.+...
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 90 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISEIVHLEETATEEEVLNELNRLNNDDS 90 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 45677889999999999888763 456788876654 5678899974322 223344566677777765531
Q ss_pred E--EE----EcCCcccHHHHH
Q 038599 298 T--AM----VGDGINDAPALA 312 (473)
Q Consensus 298 v--~m----vGDG~ND~~al~ 312 (473)
| .+ +-++.|+...+.
T Consensus 91 V~GIivq~Plp~~i~~~~i~~ 111 (286)
T PRK14175 91 VSGILVQVPLPKQVSEQKILE 111 (286)
T ss_pred CCEEEEeCCCCCCCCHHHHHh
Confidence 1 11 246666655444
No 255
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=34.49 E-value=93 Score=23.69 Aligned_cols=46 Identities=26% Similarity=0.270 Sum_probs=29.3
Q ss_pred EEEecCccCCchHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCC
Q 038599 226 TFSLSDSCRSGALEAIKDLKSLGIKSFILA-GDSHAAALYAQDQLDH 271 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~~gi~v~mlT-GD~~~~a~~~a~~~gi 271 (473)
++.+.++.++.+.+..+.||+.|+++.+.. +.+.......|+..|+
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~ 52 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGA 52 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCC
Confidence 344556677778888899999998877633 2344444444455544
No 256
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=34.46 E-value=1.1e+02 Score=28.79 Aligned_cols=57 Identities=26% Similarity=0.335 Sum_probs=44.0
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCH-----HHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSH-----AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~-----~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+..+++.++++.|+. .+++||+. .....++.++|+. +++-+--.+|.++++.+...|
T Consensus 74 ~l~~~l~~~~~~g~~-~vv~G~i~sd~~~~~~e~v~~~~gl~---~~~PLw~~~~~el~~~~~~~G 135 (218)
T TIGR03679 74 DLKGALKELKREGVE-GIVTGAIASRYQKSRIERICEELGLK---VFAPLWGRDQEEYLRELVERG 135 (218)
T ss_pred HHHHHHHHHHHcCCC-EEEECCcccHhHHHHHHHHHHhCCCe---EEeehhcCCHHHHHHHHHHCC
Confidence 366778888877876 55688874 5556888999984 666666678999999999988
No 257
>cd06279 PBP1_LacI_like_3 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=34.26 E-value=1.9e+02 Score=27.74 Aligned_cols=58 Identities=17% Similarity=0.186 Sum_probs=25.2
Q ss_pred HHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEc
Q 038599 242 KDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVG 302 (473)
Q Consensus 242 ~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvG 302 (473)
+.+++.|+.+.+.+.++.........+.+.+ -+.....+.. ...++.+++.| +|.+++
T Consensus 28 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~d--giii~~~~~~-~~~~~~~~~~~ipvV~~~ 86 (283)
T cd06279 28 EVLDAAGVNLLLLPASSEDSDSALVVSALVD--GFIVYGVPRD-DPLVAALLRRGLPVVVVD 86 (283)
T ss_pred HHHHHCCCEEEEecCccHHHHHHHHHhcCCC--EEEEeCCCCC-hHHHHHHHHcCCCEEEEe
Confidence 3455566666665555433333333334433 2221111111 13455555555 555554
No 258
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=33.78 E-value=3.4e+02 Score=26.31 Aligned_cols=89 Identities=19% Similarity=0.263 Sum_probs=52.2
Q ss_pred cCccCCchHHHHHHHHhCCCeEE-EEcCCC-HHHHHHHHHHcC-CCccceeh-----cc---ChhhHHHHHHHHhhC-Cc
Q 038599 230 SDSCRSGALEAIKDLKSLGIKSF-ILAGDS-HAAALYAQDQLD-HAFDMVYA-----EL---LPQHKEELVELLKKD-GA 297 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~gi~v~-mlTGD~-~~~a~~~a~~~g-i~~~~v~a-----~~---~P~~K~~~v~~l~~~-g~ 297 (473)
-|.+-++..+.++.+++.|+..+ +++-.. .+....+++... .. .+.+ .. .+.+-.+.++.+++. +.
T Consensus 122 pDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~~gfi--y~vs~~G~TG~~~~~~~~~~~~i~~lr~~~~~ 199 (256)
T TIGR00262 122 ADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKSQGFV--YLVSRAGVTGARNRAASALNELVKRLKAYSAK 199 (256)
T ss_pred CCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhCCCCE--EEEECCCCCCCcccCChhHHHHHHHHHhhcCC
Confidence 45555788999999999999955 666555 344556666554 32 2211 11 123345666666665 33
Q ss_pred EEEEcCCcc---cHHHHHH--CCeeEEeC
Q 038599 298 TAMVGDGIN---DAPALAA--VDIGISMG 321 (473)
Q Consensus 298 v~mvGDG~N---D~~al~~--AdvgIa~g 321 (473)
-.++|=|++ |+..+.. || |+.+|
T Consensus 200 pi~vgfGI~~~e~~~~~~~~GAD-gvVvG 227 (256)
T TIGR00262 200 PVLVGFGISKPEQVKQAIDAGAD-GVIVG 227 (256)
T ss_pred CEEEeCCCCCHHHHHHHHHcCCC-EEEEC
Confidence 366788988 4444443 34 55554
No 259
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=33.71 E-value=22 Score=32.33 Aligned_cols=26 Identities=35% Similarity=0.594 Sum_probs=22.4
Q ss_pred hhhcCccEEEEcCCCcCCCCceEEEE
Q 038599 92 EILAKVKMVALDKTGTVTRGEFTVTD 117 (473)
Q Consensus 92 E~lg~vd~i~fDKTGTLT~g~~~V~~ 117 (473)
|.+..++.++||=.|+||.|++.+..
T Consensus 2 ~~~~~i~~~v~d~dGv~tdg~~~~~~ 27 (169)
T TIGR02726 2 EQAKNIKLVILDVDGVMTDGRIVIND 27 (169)
T ss_pred CccccCeEEEEeCceeeECCeEEEcC
Confidence 55678999999999999999987654
No 260
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=33.46 E-value=62 Score=30.05 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=49.0
Q ss_pred HHHhcCCceeeEeeeC--------------CeEEEEEEecCccCCchHHHHHHHHhCCCe---EEEEcCCCHHHHHHHHH
Q 038599 205 EAKCTGGKTRGYVYLG--------------ATPVGTFSLSDSCRSGALEAIKDLKSLGIK---SFILAGDSHAAALYAQD 267 (473)
Q Consensus 205 ~~~~~~G~~vi~va~d--------------~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~---v~mlTGD~~~~a~~~a~ 267 (473)
.-+...|++++++..| -.++|+-.......+..++.++.|++.|.+ .+++-|... ...+++
T Consensus 106 ~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~--~~~~~~ 183 (197)
T TIGR02370 106 TMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPV--TQDWAD 183 (197)
T ss_pred HHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhc--CHHHHH
Confidence 3455678888877643 358888888888899999999999999875 445666444 346788
Q ss_pred HcCCC
Q 038599 268 QLDHA 272 (473)
Q Consensus 268 ~~gi~ 272 (473)
++|-+
T Consensus 184 ~~gad 188 (197)
T TIGR02370 184 KIGAD 188 (197)
T ss_pred HhCCc
Confidence 88875
No 261
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=33.02 E-value=1.1e+02 Score=30.33 Aligned_cols=202 Identities=18% Similarity=0.222 Sum_probs=109.7
Q ss_pred CceeeCchHhhhhcCccEEEEcCCCcCCCCceEEEEEEecCCCCCHHHHHHHHHhhhccCCChHHHHHHHHHHHcCCCCC
Q 038599 82 GLLVKGGDYLEILAKVKMVALDKTGTVTRGEFTVTDFQSICDDVSLGTLLYWVSSIESKSSHPMAAALVDYARSLAIEPV 161 (473)
Q Consensus 82 gilvk~~~~lE~lg~vd~i~fDKTGTLT~g~~~V~~i~~~~~~~~~~~ll~~~a~~e~~s~hpi~~Ai~~~a~~~~~~~~ 161 (473)
|=++-|+..+|.|.+--+...|....+.+|.-.+.. .|=+...+.+.++++++...
T Consensus 35 G~iIHN~~vv~~L~~~Gv~~v~~~~~~~~g~~Viir------------------------AHGv~~~~~~~l~~~g~~vi 90 (281)
T PF02401_consen 35 GPIIHNPQVVERLEKRGVKVVDDIDEVPEGDTVIIR------------------------AHGVPPEVYEELKERGLEVI 90 (281)
T ss_dssp S-SSS-HHHHHHHHHCTEEEESSGCGS-TTEEEEE-------------------------TT---HHHHHHHHHTTEEEE
T ss_pred cCcccCHHHHHHHHHCCCEEecCccccCCCCEEEEe------------------------CCCCCHHHHHHHHHcCCEEE
Confidence 455678899999999888888887777776544333 23344455555555554310
Q ss_pred ---CCCccc----cccccCCceeEEecCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEee----------eCCeEE
Q 038599 162 ---PENVED----FQNFPGEGIFGKIHGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVY----------LGATPV 224 (473)
Q Consensus 162 ---~~~v~~----~~~~~g~gv~~~v~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va----------~d~~~l 224 (473)
.+.+.. ......+|. ..+.+|.+...+-.+ +..+...+ ....+. .+..-+
T Consensus 91 DaTCP~V~k~~~~v~~~~~~Gy------~iviiG~~~HpEv~g------i~g~~~~~-~~~vv~~~~~~~~l~~~~~~kv 157 (281)
T PF02401_consen 91 DATCPFVKKIHKIVRKYAKEGY------QIVIIGDKNHPEVIG------ILGYAPEE-KAIVVESPEDVEKLPISDPKKV 157 (281)
T ss_dssp E---HHHHHHHHHHHHHHHCT-------EEEEES-TT-HHHHH------HHCCHHTS--EEEESSHHHHHHGGGSSTTCE
T ss_pred ECCChhHHHHHHHHHHHHhcCC------EEEEECCCCCceEEE------ecccccCC-ceEEeCChhhhcccCCCCCCeE
Confidence 001111 112223333 345666653211000 11111100 111110 122356
Q ss_pred EEEEecCccCCchHHHHHHHHhCCCeEE--------EEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 225 GTFSLSDSCRSGALEAIKDLKSLGIKSF--------ILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 225 G~i~l~d~lr~~a~~~I~~L~~~gi~v~--------mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+++.-.-..+++..+.++.|++..-... -.|-+....+..+|+++.+. .|.+.-....-.++.+-.++.|
T Consensus 158 ~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m--iVIGg~~SsNT~kL~eia~~~~ 235 (281)
T PF02401_consen 158 AVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM--IVIGGKNSSNTRKLAEIAKEHG 235 (281)
T ss_dssp EEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE--EEES-TT-HHHHHHHHHHHHCT
T ss_pred EEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE--EEecCCCCccHHHHHHHHHHhC
Confidence 6666666677888999999998876655 23556678888899988876 7777777777788888888888
Q ss_pred -cEEEEcCCcccHH--HHHHC-CeeEEeCCC
Q 038599 297 -ATAMVGDGINDAP--ALAAV-DIGISMGIS 323 (473)
Q Consensus 297 -~v~mvGDG~ND~~--al~~A-dvgIa~g~~ 323 (473)
.+..+.+ ..|.+ .|+.. .|||.-|.+
T Consensus 236 ~~t~~Ie~-~~el~~~~l~~~~~VGItaGAS 265 (281)
T PF02401_consen 236 KPTYHIET-ADELDPEWLKGVKKVGITAGAS 265 (281)
T ss_dssp TCEEEESS-GGG--HHHHTT-SEEEEEE-TT
T ss_pred CCEEEeCC-ccccCHhHhCCCCEEEEEccCC
Confidence 8888854 44544 56666 779988733
No 262
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.77 E-value=65 Score=32.12 Aligned_cols=67 Identities=18% Similarity=0.193 Sum_probs=47.8
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.++++++.++.++.+++. |++ ..++-||++... ...|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p~La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~i~~lN~d 88 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTPGLAVVLVGEDPASQVYVRSKGKQTKEAGMASFEHKLPADTSQAELLALIARLNAD 88 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3466788899999999887 775 345668876544 46678999974432 2556777778888888766
No 263
>TIGR00249 sixA phosphohistidine phosphatase SixA.
Probab=32.74 E-value=1.5e+02 Score=26.22 Aligned_cols=77 Identities=18% Similarity=0.103 Sum_probs=50.1
Q ss_pred ecCccCCchHHHHHHHHhCCCe-EEEEcCCC---HHHHHHHHHHcCCCcc-ceehccC----hhhHHHHHHHHhhC-C-c
Q 038599 229 LSDSCRSGALEAIKDLKSLGIK-SFILAGDS---HAAALYAQDQLDHAFD-MVYAELL----PQHKEELVELLKKD-G-A 297 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~-v~mlTGD~---~~~a~~~a~~~gi~~~-~v~a~~~----P~~K~~~v~~l~~~-g-~ 297 (473)
+.+.-|..++..-+.|++.|+. -.++|.+- .+||+.+++.++.+.. .+...+. +++-...++.+..+ + .
T Consensus 23 Lt~~G~~qa~~~~~~l~~~~~~~d~i~sSp~~Ra~qTa~~l~~~~~~~~~~~~~~~l~p~~~~~~~~~~l~~~~~~~~~~ 102 (152)
T TIGR00249 23 LTTNGCDESRLVAQWLKGQGVEIERILVSPFVRAEQTAEIVGDCLNLPSSAEVLEGLTPCGDIGLVSDYLEALTNEGVAS 102 (152)
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCCEEEECCcHHHHHHHHHHHHHcCCCcceEEccCcCCCCCHHHHHHHHHHHHhcCCCE
Confidence 3445566788888888887754 35667665 5677788888886432 2233344 45556677777654 3 7
Q ss_pred EEEEcCCc
Q 038599 298 TAMVGDGI 305 (473)
Q Consensus 298 v~mvGDG~ 305 (473)
|++||.+.
T Consensus 103 vliVgH~P 110 (152)
T TIGR00249 103 VLLVSHLP 110 (152)
T ss_pred EEEEeCCC
Confidence 99998764
No 264
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=32.12 E-value=1.1e+02 Score=32.33 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=27.5
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQL 269 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~ 269 (473)
|+.+..+++||+.|.++.++|+-+..-+..+.+.+
T Consensus 186 ~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl 220 (448)
T PF05761_consen 186 PKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL 220 (448)
T ss_dssp CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH
T ss_pred chHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc
Confidence 57899999999999999999999888777777654
No 265
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=31.48 E-value=1e+02 Score=31.05 Aligned_cols=75 Identities=16% Similarity=0.220 Sum_probs=47.2
Q ss_pred cCccCCchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHHcCCC-----ccceehccChhhHHHHHHHHhhCC-cEEE
Q 038599 230 SDSCRSGALEAIKDLKSL---GIKSFILAGDSHAAALYAQDQLDHA-----FDMVYAELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~---gi~v~mlTGD~~~~a~~~a~~~gi~-----~~~v~a~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
...+-||..++++..++. |+.+...+-|+...+++++.- |-. .+-|-++.. -.+.+.++.+.+.. .-.+
T Consensus 176 ~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~-g~~avmPl~~pIGsg~g-v~~p~~i~~~~e~~~vpVi 253 (326)
T PRK11840 176 AKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA-GAVAVMPLGAPIGSGLG-IQNPYTIRLIVEGATVPVL 253 (326)
T ss_pred CCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc-CCEEEeeccccccCCCC-CCCHHHHHHHHHcCCCcEE
Confidence 344678889999998888 999988888999998887754 532 111111111 12444455554443 5577
Q ss_pred EcCCcc
Q 038599 301 VGDGIN 306 (473)
Q Consensus 301 vGDG~N 306 (473)
+|-|+-
T Consensus 254 vdAGIg 259 (326)
T PRK11840 254 VDAGVG 259 (326)
T ss_pred EeCCCC
Confidence 777765
No 266
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=31.45 E-value=3.1e+02 Score=26.24 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=47.4
Q ss_pred CchHHHHHHHHhCCCeEEEEcCC--CHHHHHHHHHHcCCC----ccceehccChhhHHHHHHHHhhC--CcEEEEcCCc-
Q 038599 235 SGALEAIKDLKSLGIKSFILAGD--SHAAALYAQDQLDHA----FDMVYAELLPQHKEELVELLKKD--GATAMVGDGI- 305 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD--~~~~a~~~a~~~gi~----~~~v~a~~~P~~K~~~v~~l~~~--g~v~mvGDG~- 305 (473)
++..+.++.+++.|+++.++-.. +.+....+++...-- .+..++.--+.+-.+.++.+++. .....+|-|+
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~~~~l~msv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~gGI~ 195 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLSPLFIYYGLRPATGVPLPVSVERNIKRVRNLVGNKYLVVGFGLD 195 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCEEEEEeCCCCCCCchHHHHHHHHHHHHhcCCCCEEEeCCcC
Confidence 46778999999999997655433 245556666655421 00112222233333344444433 2346788888
Q ss_pred --ccHHHHHHCCe-eEEeC
Q 038599 306 --NDAPALAAVDI-GISMG 321 (473)
Q Consensus 306 --ND~~al~~Adv-gIa~g 321 (473)
+|+..+..+++ |+-+|
T Consensus 196 ~~e~i~~~~~~gaD~vvvG 214 (244)
T PRK13125 196 SPEDARDALSAGADGVVVG 214 (244)
T ss_pred CHHHHHHHHHcCCCEEEEC
Confidence 35556545543 44454
No 267
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea. Catalysis of the enzymes proceeds via a Schiff-base mechanism like other class I aldolases, although this subfamily is clearly divergent based on sequence similarity to other class I and class II (metal dependent) aldolase subfamilies.
Probab=31.31 E-value=1.3e+02 Score=28.48 Aligned_cols=87 Identities=11% Similarity=0.106 Sum_probs=49.3
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEc------------CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC-C-
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILA------------GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-G- 296 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlT------------GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~-g- 296 (473)
+....+.++..+.+++.|+++++=. .+....+.+.+.+.|-+ .+....+. -.+.++.+.+. +
T Consensus 105 ~~~~~~i~~v~~~~~~~g~~~iie~~~~g~~~~~~~~~~~i~~~~~~a~~~GaD--~Ik~~~~~--~~~~~~~i~~~~~~ 180 (235)
T cd00958 105 REMLEELARVAAEAHKYGLPLIAWMYPRGPAVKNEKDPDLIAYAARIGAELGAD--IVKTKYTG--DAESFKEVVEGCPV 180 (235)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCCcccCccCHHHHHHHHHHHHHHCCC--EEEecCCC--CHHHHHHHHhcCCC
Confidence 3344567777777788899876511 22233345567778876 55554322 23445555443 3
Q ss_pred cEEEEcC-Cccc-------HHHHHHCCe-eEEeC
Q 038599 297 ATAMVGD-GIND-------APALAAVDI-GISMG 321 (473)
Q Consensus 297 ~v~mvGD-G~ND-------~~al~~Adv-gIa~g 321 (473)
+|...|. +..| +..+.++++ |+++|
T Consensus 181 pvv~~GG~~~~~~~~~l~~~~~~~~~Ga~gv~vg 214 (235)
T cd00958 181 PVVIAGGPKKDSEEEFLKMVYDAMEAGAAGVAVG 214 (235)
T ss_pred CEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 6767674 5444 444455554 77776
No 268
>cd06167 LabA_like LabA_like proteins. A well conserved group of bacterial proteins with no defined function. LabA, a member from Synechococcus elongatus PCC 7942, has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC, a central component of the circadian clock system. In particular, LabA seems necessary for KaiC-dependent repression of gene expression.
Probab=31.13 E-value=1.5e+02 Score=25.54 Aligned_cols=27 Identities=30% Similarity=0.315 Sum_probs=15.4
Q ss_pred HHHHHHHhhCC-cEEEEcCCcccHHHHH
Q 038599 286 EELVELLKKDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 286 ~~~v~~l~~~g-~v~mvGDG~ND~~al~ 312 (473)
...++.++++| +|..+|-...-...|+
T Consensus 113 ~~~i~~lr~~G~~V~v~~~~~~~s~~L~ 140 (149)
T cd06167 113 VPLVERLRELGKRVIVVGFEAKTSRELR 140 (149)
T ss_pred HHHHHHHHHcCCEEEEEccCccChHHHH
Confidence 44566677777 6666665534444443
No 269
>PRK04302 triosephosphate isomerase; Provisional
Probab=31.08 E-value=3e+02 Score=25.91 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=51.8
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehc-------------cChhhHHHHHHHHhhC--CcE
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAE-------------LLPQHKEELVELLKKD--GAT 298 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~-------------~~P~~K~~~v~~l~~~--g~v 298 (473)
-++..+.++.+++.|+.+++.+|+.. .+..+ .+.+-+ .+..+ .+|++-.++++.+++. +.-
T Consensus 100 ~~e~~~~v~~a~~~Gl~~I~~v~~~~-~~~~~-~~~~~~--~I~~~p~~~igt~~~~~~~~~~~i~~~~~~ir~~~~~~p 175 (223)
T PRK04302 100 LADIEAVVERAKKLGLESVVCVNNPE-TSAAA-AALGPD--YVAVEPPELIGTGIPVSKAKPEVVEDAVEAVKKVNPDVK 175 (223)
T ss_pred HHHHHHHHHHHHHCCCeEEEEcCCHH-HHHHH-hcCCCC--EEEEeCccccccCCCCCcCCHHHHHHHHHHHHhccCCCE
Confidence 34678899999999999999998843 33333 344432 22211 3477766777777763 344
Q ss_pred EEEcCCcccHH---HHHHCCe-eEEeC
Q 038599 299 AMVGDGINDAP---ALAAVDI-GISMG 321 (473)
Q Consensus 299 ~mvGDG~ND~~---al~~Adv-gIa~g 321 (473)
.+.|-|+++.. .+.++++ |+.+|
T Consensus 176 vi~GggI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 176 VLCGAGISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred EEEECCCCCHHHHHHHHcCCCCEEEEe
Confidence 56688886544 4444444 66665
No 270
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=30.99 E-value=5.2e+02 Score=28.12 Aligned_cols=71 Identities=15% Similarity=0.186 Sum_probs=54.8
Q ss_pred chHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCccc
Q 038599 236 GALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGIND 307 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND 307 (473)
|.-.++...++.+-++.+++=.+ ...+..++.-+++.. ..+.-.++++=...|+.++++|.-+.|||++--
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i-~~~~~~~~~e~~~~v~~lk~~G~~~vvG~~~~~ 166 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRI-EQRSYVTEEDARGQINELKANGIEAVVGAGLIT 166 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-EEEEecCHHHHHHHHHHHHHCCCCEEEcCchHH
Confidence 56677777777777888877555 556778888888864 346667889999999999999977788998763
No 271
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=30.80 E-value=72 Score=32.70 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=47.4
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.+|.+.++-+++|++. |++ .+++-||++.... ..|+++||....+. .+.+.++-.+.|+.|.+.
T Consensus 81 iA~~i~~~lk~~v~~lk~~~g~~P~LaiIlvG~dpaS~~Yv~~k~K~~e~~GI~~~~~~lpe~~te~ell~~I~~LN~D 159 (364)
T PLN02616 81 VAKKIRDEITIEVSRMKESIGVVPGLAVILVGDRKDSATYVRNKKKACDSVGINSFEVRLPEDSTEQEVLKFISGFNND 159 (364)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 5678889999999999887 765 4566788876554 66789999744332 344555667778888665
No 272
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=30.68 E-value=2e+02 Score=27.70 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=31.8
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
...+++|++|++.||+|-+.= |+.......|+++|-+.
T Consensus 113 ~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~ 150 (239)
T PRK05265 113 DKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADR 150 (239)
T ss_pred HHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 456789999999999977655 78888889999999874
No 273
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=30.63 E-value=88 Score=35.79 Aligned_cols=70 Identities=9% Similarity=-0.050 Sum_probs=50.5
Q ss_pred chhHHHHhcCCceeeEeeeCCeEEEEEEec-----CccCCchHHHHHHHHhC-CCeEEEEcCCCHHHHHHHHHHcC
Q 038599 201 DSIAEAKCTGGKTRGYVYLGATPVGTFSLS-----DSCRSGALEAIKDLKSL-GIKSFILAGDSHAAALYAQDQLD 270 (473)
Q Consensus 201 ~~~~~~~~~~G~~vi~va~d~~~lG~i~l~-----d~lr~~a~~~I~~L~~~-gi~v~mlTGD~~~~a~~~a~~~g 270 (473)
....+.|.+...+.+++-+||+++.+..-. -.+-++..+++++|.+. +..|+++||.+......+-...+
T Consensus 496 ~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 496 QDVIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred HHHHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 334567777777899999999998532211 11456778888888765 67899999999998887765544
No 274
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.33 E-value=71 Score=31.84 Aligned_cols=67 Identities=15% Similarity=0.223 Sum_probs=46.4
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.++++++.++-++.+++. |++ ..++.||++.... ..|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 87 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVPGLTVIIVGEDPASQVYVRNKAKSCKEIGMNSTVIELPADTTEEHLLKKIEDLNND 87 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3566788999999999877 665 4567898876554 5678999974422 2334455677777777655
No 275
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.28 E-value=2e+02 Score=28.41 Aligned_cols=61 Identities=16% Similarity=0.256 Sum_probs=32.9
Q ss_pred ehccChhhHHHHHHHHhh--CC-cEEEEcCC-cccHH---HHHH--CCeeEEeCCCCCc--cccccccEEEec
Q 038599 277 YAELLPQHKEELVELLKK--DG-ATAMVGDG-INDAP---ALAA--VDIGISMGISGSA--LAMESGHVILMS 338 (473)
Q Consensus 277 ~a~~~P~~K~~~v~~l~~--~g-~v~mvGDG-~ND~~---al~~--AdvgIa~g~~~~~--~a~~~ad~vl~~ 338 (473)
|..++|..=.++++.+.- +| .|..+|.+ .-=-| .|.. |.|-+... ...+ .....||+++..
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs-~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHS-KTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEec-ChhHHHHHHhhCCEEEEC
Confidence 345566666666666542 36 89999988 33333 4433 44444442 1111 223567887744
No 276
>COG1832 Predicted CoA-binding protein [General function prediction only]
Probab=29.98 E-value=2.4e+02 Score=24.82 Aligned_cols=86 Identities=15% Similarity=0.170 Sum_probs=55.9
Q ss_pred CeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC--CCH--------HHHHHHHHHcCCCccceehccChhhHHHHHH
Q 038599 221 ATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG--DSH--------AAALYAQDQLDHAFDMVYAELLPQHKEELVE 290 (473)
Q Consensus 221 ~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG--D~~--------~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~ 290 (473)
..-++++++++.+...+-.+.+.|+++|++++=+-- +-. .+...+.+.+.+. ++|- .||.-..+++
T Consensus 16 ~K~IAvVG~S~~P~r~sy~V~kyL~~~GY~ViPVNP~~~~~eiLG~k~y~sL~dIpe~IDiV--dvFR--~~e~~~~i~~ 91 (140)
T COG1832 16 AKTIAVVGASDKPDRPSYRVAKYLQQKGYRVIPVNPKLAGEEILGEKVYPSLADIPEPIDIV--DVFR--RSEAAPEVAR 91 (140)
T ss_pred CceEEEEecCCCCCccHHHHHHHHHHCCCEEEeeCcccchHHhcCchhhhcHHhCCCCCcEE--EEec--ChhhhHHHHH
Confidence 345678889999999999999999999999987643 110 0011111222222 4443 3677778888
Q ss_pred HHhhCC-cEEEEcCCcccHHH
Q 038599 291 LLKKDG-ATAMVGDGINDAPA 310 (473)
Q Consensus 291 ~l~~~g-~v~mvGDG~ND~~a 310 (473)
..-+.| ++...--|+-+-.|
T Consensus 92 eal~~~~kv~W~QlGi~n~ea 112 (140)
T COG1832 92 EALEKGAKVVWLQLGIRNEEA 112 (140)
T ss_pred HHHhhCCCeEEEecCcCCHHH
Confidence 877777 77777777544333
No 277
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.86 E-value=73 Score=31.78 Aligned_cols=67 Identities=21% Similarity=0.143 Sum_probs=48.0
Q ss_pred ecCccCCchHHHHHHHHhC-CCeE---EEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIKS---FILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~v---~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+++|++.++.++.+++. |++. .++-||++.... ..|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~p~LaiI~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 88 (297)
T PRK14186 10 LAAEIEQRLQAQIESNLPKAGRPPGLAVLRVGDDPASAVYVRNKEKACARVGIASFGKHLPADTSQAEVEALIAQLNQD 88 (297)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3567888999999999877 7753 566788876554 5678999974422 3455677778888888765
No 278
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.80 E-value=77 Score=31.47 Aligned_cols=66 Identities=18% Similarity=0.218 Sum_probs=46.5
Q ss_pred cCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 230 SDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
...++++.++.++.|++. |++ ..++.||++... ...|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d 87 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNAR 87 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 456788899999999877 775 356678887654 456788999754332 334566777778877665
No 279
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=29.78 E-value=2.7e+02 Score=24.49 Aligned_cols=67 Identities=12% Similarity=0.089 Sum_probs=45.4
Q ss_pred EEEEecCccCCchHHHHHHHHhC--CCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 225 GTFSLSDSCRSGALEAIKDLKSL--GIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 225 G~i~l~d~lr~~a~~~I~~L~~~--gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
-++.+.|.-|++..+.++.+++. |+++ +.|++ |+..+.+..|+....+..+.. ....+++..+++..
T Consensus 7 v~lsv~d~dK~~l~~~a~~l~~ll~Gf~l-~AT~g---Ta~~L~~~~Gi~v~~vi~~~~-gg~~~i~~~I~~g~ 75 (142)
T PRK05234 7 IALIAHDHKKDDLVAWVKAHKDLLEQHEL-YATGT---TGGLIQEATGLDVTRLLSGPL-GGDQQIGALIAEGK 75 (142)
T ss_pred EEEEEeccchHHHHHHHHHHHHHhcCCEE-EEeCh---HHHHHHhccCCeeEEEEcCCC-CCchhHHHHHHcCc
Confidence 36778999999999999999999 9996 46764 455555444887554522211 13466777776654
No 280
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=29.74 E-value=76 Score=30.57 Aligned_cols=37 Identities=14% Similarity=0.167 Sum_probs=33.8
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
..+.|++|++.|+.|+-++-|...+-..+-+++||..
T Consensus 198 l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 198 LKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 3788999999999999999999999999999999973
No 281
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=29.71 E-value=1.3e+02 Score=30.97 Aligned_cols=71 Identities=24% Similarity=0.317 Sum_probs=46.2
Q ss_pred chHHHHHHHHhCCC-e-EEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 236 GALEAIKDLKSLGI-K-SFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 236 ~a~~~I~~L~~~gi-~-v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
++...+.++.+.|. + ++-.| |..-......|+++|+.-..+..+-+|..|.+.+ +..| .|..+|+...|+.
T Consensus 34 ~a~~~i~~~~~~~~~~~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~---~~~GA~V~~~~~~~~~a~ 108 (380)
T TIGR01127 34 GALNKIANLSEDQRQRGVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKAT---KSYGAEVILHGDDYDEAY 108 (380)
T ss_pred HHHHHHHhcchhccCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHH---HHCCCEEEEECCCHHHHH
Confidence 44455566665553 2 44444 4445566678899999866666667787885554 4557 8888988766654
No 282
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=29.68 E-value=5.6e+02 Score=27.56 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=63.4
Q ss_pred HHHHhcCCce-eeEeeeCCeEEEEEEecCccCCchHHHHHHHHh--CCCeEEEEcCCCHH---HHHHHHHHcCCCcccee
Q 038599 204 AEAKCTGGKT-RGYVYLGATPVGTFSLSDSCRSGALEAIKDLKS--LGIKSFILAGDSHA---AALYAQDQLDHAFDMVY 277 (473)
Q Consensus 204 ~~~~~~~G~~-vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~--~gi~v~mlTGD~~~---~a~~~a~~~gi~~~~v~ 277 (473)
.+.+.+.+.. +..+..++.++|++...|-++..... ..+++ ..+.|...-|.+.. .+..+ -+.|++ .+.
T Consensus 184 l~lm~e~~i~~LPVVd~~g~liGIIT~~DIl~~~~~p--~a~~D~~GrL~Vgaavg~~~~~~~~~~~l-~~ag~d--~i~ 258 (495)
T PTZ00314 184 NEVLRESRKGKLPIVNDNGELVALVSRSDLKKNRGYP--NASLDSNGQLLVGAAISTRPEDIERAAAL-IEAGVD--VLV 258 (495)
T ss_pred HHHHHHcCCCeEEEEcCCCcEEEEEEehHhhhcccCc--hhhhccCCCEEEEEEECCCHHHHHHHHHH-HHCCCC--EEE
Confidence 3444444444 33344567899999999988765422 22333 24556566665543 33333 345765 444
Q ss_pred hcc---ChhhHHHHHHHHhhC-C-cEEEEcCCc--ccHHHHHHCCe
Q 038599 278 AEL---LPQHKEELVELLKKD-G-ATAMVGDGI--NDAPALAAVDI 316 (473)
Q Consensus 278 a~~---~P~~K~~~v~~l~~~-g-~v~mvGDG~--ND~~al~~Adv 316 (473)
-+. ....-.+.|+.+++. . .-.+.|+.. +|+..+..|++
T Consensus 259 id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aGa 304 (495)
T PTZ00314 259 VDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGA 304 (495)
T ss_pred EecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcCC
Confidence 333 223345678888877 3 557778876 57777888776
No 283
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.59 E-value=79 Score=31.33 Aligned_cols=67 Identities=24% Similarity=0.309 Sum_probs=46.2
Q ss_pred ecCccCCchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKS---FILAGDSHAAA------LYAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v---~mlTGD~~~~a------~~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.+|++.++-+++|++.|++. .++-||++... ...|+++||..+.+ -...+.++-.+.|+.|.+.
T Consensus 11 vA~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 88 (284)
T PRK14190 11 VAKEKREQLKEEVVKLKEQGIVPGLAVILVGDDPASHSYVRGKKKAAEKVGIYSELYEFPADITEEELLALIDRLNAD 88 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 45677889999999999888753 45568887554 46678999974422 2334455677777777655
No 284
>PRK13958 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional
Probab=29.57 E-value=2.4e+02 Score=26.36 Aligned_cols=71 Identities=15% Similarity=0.102 Sum_probs=51.3
Q ss_pred CCeEEEEEEecCccCCchHHHHHHHHh---CCC-eEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhh
Q 038599 220 GATPVGTFSLSDSCRSGALEAIKDLKS---LGI-KSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK 294 (473)
Q Consensus 220 d~~~lG~i~l~d~lr~~a~~~I~~L~~---~gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~ 294 (473)
+-.++|++.....+|.=..+..+++.+ ..+ +|.+...++......++++++++.-++|+.-+|+ .++.|+.
T Consensus 21 GaD~iGfIf~~~SpR~V~~~~a~~i~~~~~~~~~~VgVf~~~~~~~i~~~~~~~~~d~vQLHG~e~~~----~~~~l~~ 95 (207)
T PRK13958 21 PIDAIGFIHYEKSKRHQTITQIKKLASAVPNHIDKVCVVVNPDLTTIEHILSNTSINTIQLHGTESID----FIQEIKK 95 (207)
T ss_pred CCCEEEEecCCCCcccCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhCCCCEEEECCCCCHH----HHHHHhh
Confidence 346789986688888655555555554 234 4778889999999999999999866788877665 3555654
No 285
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.33 E-value=86 Score=31.29 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=48.3
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++-++.+++. |++ ..++-||++... ...|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 11 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D 89 (297)
T PRK14168 11 IREEILEEIRGEVAELKEKYGKVPGLVTILVGESPASLSYVTLKIKTAHRLGFHEIQDNQSVDITEEELLALIDKYNND 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3567788899999999887 765 456678887654 466789999743222 456777788888888766
No 286
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=29.09 E-value=52 Score=29.85 Aligned_cols=77 Identities=21% Similarity=0.210 Sum_probs=52.9
Q ss_pred CccCCchHHHHHHH-HhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCC--cc
Q 038599 231 DSCRSGALEAIKDL-KSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDG--IN 306 (473)
Q Consensus 231 d~lr~~a~~~I~~L-~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG--~N 306 (473)
+..-+++.+.++++ .+.|..+++..|- +|..+.+..+++ .+.-..+..|=.+.++..++.+ +++++|.. ..
T Consensus 16 ~~~~e~~v~~a~~~~~~~g~dViIsRG~---ta~~lr~~~~iP--VV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~ 90 (176)
T PF06506_consen 16 EASLEEAVEEARQLLESEGADVIISRGG---TAELLRKHVSIP--VVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIP 90 (176)
T ss_dssp E--HHHHHHHHHHHHTTTT-SEEEEEHH---HHHHHHCC-SS---EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SC
T ss_pred EecHHHHHHHHHHhhHhcCCeEEEECCH---HHHHHHHhCCCC--EEEECCCHhHHHHHHHHHHhcCCcEEEEecccccH
Confidence 34445677778888 7889999998774 677888888888 8888889889988888888887 89988764 33
Q ss_pred cHHHHH
Q 038599 307 DAPALA 312 (473)
Q Consensus 307 D~~al~ 312 (473)
|...+.
T Consensus 91 ~~~~~~ 96 (176)
T PF06506_consen 91 GLESIE 96 (176)
T ss_dssp CHHHHH
T ss_pred HHHHHH
Confidence 444443
No 287
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.09 E-value=80 Score=31.26 Aligned_cols=84 Identities=18% Similarity=0.217 Sum_probs=53.7
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCccce--ehccChhhHHHHHHHHhhCC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMV--YAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~g 296 (473)
+.+.+|++.++.++.+++. |++ +.++-||++... ...|+++||..+.+ -...+.++-.+.|+.|.+..
T Consensus 9 va~~i~~~lk~~v~~~~~~~g~~P~La~I~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~ 88 (282)
T PRK14180 9 LSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDS 88 (282)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC
Confidence 3466788999999999877 765 456778887654 35678999974422 23344566777777776653
Q ss_pred cE--EE----EcCCcccHHHHH
Q 038599 297 AT--AM----VGDGINDAPALA 312 (473)
Q Consensus 297 ~v--~m----vGDG~ND~~al~ 312 (473)
.| .+ +-++.|+...+.
T Consensus 89 ~V~GIivq~PlP~~i~~~~i~~ 110 (282)
T PRK14180 89 SVHAILVQLPLPAHINKNNVIY 110 (282)
T ss_pred CCCeEEEcCCCCCCCCHHHHHh
Confidence 11 11 245666655444
No 288
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=29.07 E-value=2.6e+02 Score=28.24 Aligned_cols=78 Identities=19% Similarity=0.122 Sum_probs=52.1
Q ss_pred EEEEEecCccCCchHHHHHHHHhC----CCeEEEEcCC-C---HHHHHHHHHHcCCCcc--ceehccChhhHHHHHHHHh
Q 038599 224 VGTFSLSDSCRSGALEAIKDLKSL----GIKSFILAGD-S---HAAALYAQDQLDHAFD--MVYAELLPQHKEELVELLK 293 (473)
Q Consensus 224 lG~i~l~d~lr~~a~~~I~~L~~~----gi~v~mlTGD-~---~~~a~~~a~~~gi~~~--~v~a~~~P~~K~~~v~~l~ 293 (473)
=|++..--.+-+++.++++.|.+. .|..+.+|.- + ...|+.+.+.+|...+ +|.-.-+|=.+.. .++
T Consensus 43 DGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHsP~r~l~---~~~ 119 (389)
T KOG1618|consen 43 DGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHSPFRLLV---EYH 119 (389)
T ss_pred ccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcChHHHHh---hhh
Confidence 355666777888999999999998 7888888833 2 4567888899997532 3333334422211 111
Q ss_pred hCCcEEEEcCCc
Q 038599 294 KDGATAMVGDGI 305 (473)
Q Consensus 294 ~~g~v~mvGDG~ 305 (473)
+..|+.+|+|.
T Consensus 120 -~k~vLv~G~~~ 130 (389)
T KOG1618|consen 120 -YKRVLVVGQGS 130 (389)
T ss_pred -hceEEEecCCc
Confidence 12799999775
No 289
>COG4996 Predicted phosphatase [General function prediction only]
Probab=28.81 E-value=94 Score=27.16 Aligned_cols=41 Identities=17% Similarity=0.020 Sum_probs=38.0
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
.+++++++.++.+|+.|.-+...|=.-+..|...-+.+++.
T Consensus 41 ~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 41 HLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred EEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 46889999999999999999999999999999999999987
No 290
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.68 E-value=84 Score=31.05 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=46.3
Q ss_pred ecCccCCchHHHHHHHHhCCCe----EEEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIK----SFILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~----v~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+++|++.++-++++++.|.. ..++-||++.... ..|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 10 iA~~i~~~lk~~i~~l~~~g~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~d 88 (278)
T PRK14172 10 VALKIKEEIKNFVEERKENGLSIPKIASILVGNDGGSIYYMNNQEKVANSLGIDFKKIKLDESISEEDLINEIEELNKD 88 (278)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3566788999999999888742 3567888876653 5678999974422 2344566677777777655
No 291
>PLN02591 tryptophan synthase
Probab=28.67 E-value=3.7e+02 Score=26.04 Aligned_cols=88 Identities=18% Similarity=0.194 Sum_probs=55.0
Q ss_pred CccCCchHHHHHHHHhCCCeEE-EEcCCCH-HHHHHHHHHc-CCCccceehc--------cChhhHHHHHHHHhhCC-cE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSF-ILAGDSH-AAALYAQDQL-DHAFDMVYAE--------LLPQHKEELVELLKKDG-AT 298 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~-mlTGD~~-~~a~~~a~~~-gi~~~~v~a~--------~~P~~K~~~v~~l~~~g-~v 298 (473)
|-+-++..+..+.+++.|+..+ ++|-... .....+++.. |+. .+.++ -.|++-.+.++.+++.. .-
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFI--Y~Vs~~GvTG~~~~~~~~~~~~i~~vk~~~~~P 191 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFV--YLVSSTGVTGARASVSGRVESLLQELKEVTDKP 191 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcE--EEeeCCCCcCCCcCCchhHHHHHHHHHhcCCCc
Confidence 4445788899999999999855 5555553 4456666654 332 22121 12566677788888764 55
Q ss_pred EEEcCCcc---cHHHHHH--CCeeEEeC
Q 038599 299 AMVGDGIN---DAPALAA--VDIGISMG 321 (473)
Q Consensus 299 ~mvGDG~N---D~~al~~--AdvgIa~g 321 (473)
.++|=|++ |+..+.. || |+-+|
T Consensus 192 v~vGFGI~~~e~v~~~~~~GAD-GvIVG 218 (250)
T PLN02591 192 VAVGFGISKPEHAKQIAGWGAD-GVIVG 218 (250)
T ss_pred eEEeCCCCCHHHHHHHHhcCCC-EEEEC
Confidence 67899988 5555444 33 55554
No 292
>TIGR03882 cyclo_dehyd_2 bacteriocin biosynthesis cyclodehydratase domain. This model describes a ThiF-like domain of a fusion protein found in clusters associated with the production of TOMMs (thiazole/oxazole-modified microcins), small bacteriocins with characteristic heterocycle modifications. This domain is presumed to act as a cyclodehydratase, as do members of the SagC family modeled by TIGR03603.
Probab=28.37 E-value=4.7e+02 Score=24.10 Aligned_cols=100 Identities=22% Similarity=0.169 Sum_probs=54.1
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcC-Cccc-HHH
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGD-GIND-APA 310 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGD-G~ND-~~a 310 (473)
.++..+++.+|.++|+-+---.+.+... ...-..+| .++....+.+++.. .|.-.|. +.+| +.+
T Consensus 58 ~~~v~~~L~~L~~~G~l~~~~~~~~~~~-~~f~~~~g------------~~~~~a~~~l~~~~V~V~~~G~~~~~~l~~a 124 (193)
T TIGR03882 58 AEEVLYALDRLERRGYLVEDAPELPPAA-AAFWSGLG------------VDPAAALERLRQLTVTVLSFGEGGAAALAAA 124 (193)
T ss_pred HHHHHHHHHHHHHCCCEeccCCCCCHHH-HHHHHHcC------------CCHHHHHHHHhcCcEEEEecCCCcHHHHHHH
Confidence 5568899999999997654222222222 22222233 35566677787764 4444443 3443 336
Q ss_pred HHHCCeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHH
Q 038599 311 LAAVDIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKAS 355 (473)
Q Consensus 311 l~~AdvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~ 355 (473)
|+.+++++.- ....-++|+.++-+ -+++-.+.|+..
T Consensus 125 Laa~Gv~~~~-------~~a~l~vVl~~Dyl--~p~L~~~n~~~l 160 (193)
T TIGR03882 125 LAAAGIRIAP-------SEADLTVVLTDDYL--DPELAAINQRAL 160 (193)
T ss_pred HHHcCCCccC-------CCCCEEEEEeCCCC--ChHHHHHHHHHH
Confidence 7778877753 11234667666554 244444444443
No 293
>PRK01222 N-(5'-phosphoribosyl)anthranilate isomerase; Provisional
Probab=28.10 E-value=2e+02 Score=27.05 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=51.1
Q ss_pred CCeEEEEEEecCccCCchHHHHHHHHhC---CC-eEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhh
Q 038599 220 GATPVGTFSLSDSCRSGALEAIKDLKSL---GI-KSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKK 294 (473)
Q Consensus 220 d~~~lG~i~l~d~lr~~a~~~I~~L~~~---gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~ 294 (473)
+-.++|++...+..|.=..+..+++.+. .+ +|.+.+.++......++++.+++.-++|+..+|+ .++.|++
T Consensus 23 Gad~iGfI~~~~S~R~V~~~~a~~i~~~~~~~i~~VgVf~~~~~~~i~~~~~~~~~d~vQLHg~e~~~----~~~~l~~ 97 (210)
T PRK01222 23 GADAIGFVFYPKSPRYVSPEQAAELAAALPPFVKVVGVFVNASDEEIDEIVETVPLDLLQLHGDETPE----FCRQLKR 97 (210)
T ss_pred CCCEEEEccCCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECCCCCHH----HHHHHHh
Confidence 3468899866888887666666665542 24 5778889999999999999999866778766654 3455554
No 294
>PLN02527 aspartate carbamoyltransferase
Probab=28.06 E-value=2.8e+02 Score=27.80 Aligned_cols=70 Identities=19% Similarity=0.191 Sum_probs=45.7
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC----hh----hHHHHHHHHhh-CC-cEEEEcC
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL----PQ----HKEELVELLKK-DG-ATAMVGD 303 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~----P~----~K~~~v~~l~~-~g-~v~mvGD 303 (473)
++..+++++-|.+. ..++++-.........+++...++ .|-+... |- |-..+.+.+.. +| +|+++||
T Consensus 83 gEs~~Dta~vls~y-~D~iviR~~~~~~~~~~a~~~~vP--VINa~~g~~~HPtQ~LaDl~Ti~e~~g~l~g~kva~vGD 159 (306)
T PLN02527 83 GETLEDTIRTVEGY-SDIIVLRHFESGAARRAAATAEIP--VINAGDGPGQHPTQALLDVYTIQREIGRLDGIKVGLVGD 159 (306)
T ss_pred CcCHHHHHHHHHHh-CcEEEEECCChhHHHHHHHhCCCC--EEECCCCCCCChHHHHHHHHHHHHHhCCcCCCEEEEECC
Confidence 56677777877777 666766666777788888888887 5655432 32 22222233322 36 8999999
Q ss_pred Ccc
Q 038599 304 GIN 306 (473)
Q Consensus 304 G~N 306 (473)
+.|
T Consensus 160 ~~~ 162 (306)
T PLN02527 160 LAN 162 (306)
T ss_pred CCC
Confidence 866
No 295
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.01 E-value=89 Score=31.14 Aligned_cols=66 Identities=14% Similarity=0.179 Sum_probs=46.0
Q ss_pred cCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCccc--eehccChhhHHHHHHHHhhC
Q 038599 230 SDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDM--VYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~--v~a~~~P~~K~~~v~~l~~~ 295 (473)
.+.+|++.++-++.|++. |++ ..++-||++.... ..|+++||..+. +-.+.+.++-.+.|+.|.+.
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D 87 (293)
T PRK14185 10 SAQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQD 87 (293)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 466788899999999887 776 3567798876553 567889997432 22334556667777777655
No 296
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=28.00 E-value=1.5e+02 Score=31.00 Aligned_cols=58 Identities=17% Similarity=0.200 Sum_probs=42.5
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC--hhhH---HHHHHHHhhCC
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL--PQHK---EELVELLKKDG 296 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~--P~~K---~~~v~~l~~~g 296 (473)
..+.=++|++.|++.++..|+.......++++.++. .|+.+-. |.++ .++.+.+++.|
T Consensus 63 L~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~ 125 (429)
T TIGR02765 63 LKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGVR--TVFLHQEVGSEEKSVERLLQQALARLG 125 (429)
T ss_pred HHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCCC--EEEEeccCCHHHHHHHHHHHHHHHhcC
Confidence 344456778889999999999999999999999998 7777654 3333 22333456666
No 297
>PRK10481 hypothetical protein; Provisional
Probab=27.77 E-value=2.8e+02 Score=26.43 Aligned_cols=119 Identities=12% Similarity=0.020 Sum_probs=67.3
Q ss_pred cCeEEEEccccccCCCCCCcchhHHHHhcCCceeeEeeeCCeEEEEEEecCccC---CchHHHHHHHHhCCCeEEEEcCC
Q 038599 181 HGNVIYIGNRRIGPRTGCSKDSIAEAKCTGGKTRGYVYLGATPVGTFSLSDSCR---SGALEAIKDLKSLGIKSFILAGD 257 (473)
Q Consensus 181 ~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr---~~a~~~I~~L~~~gi~v~mlTGD 257 (473)
||..+.++..+.... ....++.+.++|+.++.+..-+.|-|+-..+..+. ......++.+.. |-++.++|=.
T Consensus 64 dG~~v~~s~~~v~~~----lq~~i~~l~~~g~d~ivl~Ctgdfp~l~a~r~~l~~P~~~i~~lv~Al~~-g~riGVitP~ 138 (224)
T PRK10481 64 DGQQVHVSKQKVERD----LQSVIEVLDNQGYDVILLLCTGEFPSLTARNAILLEPSRILPPLVAAIVG-GHQVGVIVPV 138 (224)
T ss_pred CCCEEEEEHHHHHHH----HHHHHHHHHhCCCCEEEEEecCCCCCccccCccccCchhhHHHHHHHhcC-CCeEEEEEeC
Confidence 677777776544211 12346778888888888877777666555443332 244555555543 4677777766
Q ss_pred CHHHHHHHHHH--cCCCccceehc-----cChhhHHHHHHHHhhCC--cEEEEcCCcc
Q 038599 258 SHAAALYAQDQ--LDHAFDMVYAE-----LLPQHKEELVELLKKDG--ATAMVGDGIN 306 (473)
Q Consensus 258 ~~~~a~~~a~~--~gi~~~~v~a~-----~~P~~K~~~v~~l~~~g--~v~mvGDG~N 306 (473)
.........+. .|+. ..++. .+++...+..+.|+..| .+.+-+=|.+
T Consensus 139 ~~qi~~~~~kw~~~G~~--v~~~~aspy~~~~~~l~~aa~~L~~~gaD~Ivl~C~G~~ 194 (224)
T PRK10481 139 EEQLAQQAQKWQVLQKP--PVFALASPYHGSEEELIDAGKELLDQGADVIVLDCLGYH 194 (224)
T ss_pred HHHHHHHHHHHHhcCCc--eeEeecCCCCCCHHHHHHHHHHhhcCCCCEEEEeCCCcC
Confidence 55444433332 2444 33333 34445666677777666 3455554544
No 298
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.75 E-value=72 Score=31.67 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=46.7
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++-++++++. |++ .++.-||++..- ...|+++||..+.+. .+.++++-.+.|+.|.+.
T Consensus 10 iA~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~LN~D 88 (288)
T PRK14171 10 LANEILADLKLEIQELKSQTNASPKLAIVLVGDNPASIIYVKNKIKNAHKIGIDTLLVNLSTTIHTNDLISKINELNLD 88 (288)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCC
Confidence 3466788899999999887 775 345678776543 466789999754332 345677777778887665
No 299
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=27.75 E-value=39 Score=28.41 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=24.0
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHHH
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAAA 262 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~a 262 (473)
-++..++++.+|++|++++.+|++.....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 35788999999999999999998765443
No 300
>cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=27.75 E-value=2.2e+02 Score=28.08 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=54.1
Q ss_pred HHHHHHhCCCeE-----EEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC-C-cEEEEcCCcccHHHHH
Q 038599 240 AIKDLKSLGIKS-----FILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD-G-ATAMVGDGINDAPALA 312 (473)
Q Consensus 240 ~I~~L~~~gi~v-----~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~-g-~v~mvGDG~ND~~al~ 312 (473)
.++++.+.|++. .+=.||-...+-.+.-.+-.. .+|+..+|.+..++..+.+++ + .|.+.| ..+|-.+-.
T Consensus 163 i~~q~~E~G~~lg~~~~lvp~G~~ts~~H~~g~AiRaA--liFggv~pGn~~ei~dY~~nRV~Afv~A~G-~~s~~~~A~ 239 (287)
T cd01917 163 IVEQLLEENVKLGLDYIAYPLGNFTQAIHAANYALRAG--LMFGGIEPGKREEIRDYQRRRVRAFVLYLG-ELDMVKTAA 239 (287)
T ss_pred HHHHHHHcCCeeccceeEeecCchhhHHHHHHHHHHHH--HHhCCCCCcCHHHHHHHHHhhcCEEEEecc-ccCHHHHHH
Confidence 566666666542 233564333322222222222 679999999999998888776 5 778888 344433222
Q ss_pred HCCe---e--EEeCCCCCccccccccEEEecCCcccHHHH
Q 038599 313 AVDI---G--ISMGISGSALAMESGHVILMSNDIRKIPKA 347 (473)
Q Consensus 313 ~Adv---g--Ia~g~~~~~~a~~~ad~vl~~~~l~~l~~~ 347 (473)
.++. | +-.. ......+..-+.++...|.+.+..-
T Consensus 240 aaGai~~GfPVI~d-~~~pei~~~P~~~~~~~~~d~iv~~ 278 (287)
T cd01917 240 AAGAIFTGFPVITD-QELPEDKQIPDWFFSSSDYDKIVQN 278 (287)
T ss_pred HhhHHHcCCCEEeC-CCCcccccCccceecCCCHHHHHHH
Confidence 2222 2 2221 1222111233566666676666543
No 301
>COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism]
Probab=27.67 E-value=3.3e+02 Score=25.66 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=53.2
Q ss_pred CCeEEEEEEecCccCCchHHHHHHHHhCC--Ce-EEEEcCCCHHHHHHHHHHcCCCccceehccChhh
Q 038599 220 GATPVGTFSLSDSCRSGALEAIKDLKSLG--IK-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQH 284 (473)
Q Consensus 220 d~~~lG~i~l~d~lr~~a~~~I~~L~~~g--i~-v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~ 284 (473)
+-.++|+|.....+|.=..+..+++.+.- ++ |.+....+......++++++++.-++|+..+|+.
T Consensus 22 gad~iG~If~~~SpR~Vs~~~a~~i~~~v~~~~~VgVf~n~~~~~i~~i~~~~~ld~VQlHG~e~~~~ 89 (208)
T COG0135 22 GADYIGFIFVPKSPRYVSPEQAREIASAVPKVKVVGVFVNESIEEILEIAEELGLDAVQLHGDEDPEY 89 (208)
T ss_pred CCCEEEEEEcCCCCCcCCHHHHHHHHHhCCCCCEEEEECCCCHHHHHHHHHhcCCCEEEECCCCCHHH
Confidence 34678999988899998888888888875 34 6677888888999999999998778888877654
No 302
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.39 E-value=91 Score=30.90 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=47.4
Q ss_pred ecCccCCchHHHHHHHHhCCCeE---EEEcCCCHHHH------HHHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKS---FILAGDSHAAA------LYAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v---~mlTGD~~~~a------~~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++.++.+++.|++. .++-||++... ...|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 11 va~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~el~~~I~~lN~D 88 (284)
T PRK14193 11 TADEIKADLAERVAALKEKGITPGLGTVLVGDDPGSQAYVRGKHRDCAEVGITSIRRDLPADATQEELNAVIDELNAD 88 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 35677888999999999888764 45578887554 366789999744332 345567777777777665
No 303
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=27.20 E-value=2.1e+02 Score=25.76 Aligned_cols=96 Identities=18% Similarity=0.127 Sum_probs=67.2
Q ss_pred CceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhC-C-CeEEEEcCC--------CHHHHHHHHHHcCCCccceehcc
Q 038599 211 GKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSL-G-IKSFILAGD--------SHAAALYAQDQLDHAFDMVYAEL 280 (473)
Q Consensus 211 G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~-g-i~v~mlTGD--------~~~~a~~~a~~~gi~~~~v~a~~ 280 (473)
|.+.+.+..|..+ .+--++.+-|.-.+-|++||.. | ..+.++|.- ....|.++..+.||+. .-++-.
T Consensus 42 ~ikavVlDKDNci--t~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV-lRHs~k 118 (190)
T KOG2961|consen 42 GIKAVVLDKDNCI--TAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV-LRHSVK 118 (190)
T ss_pred CceEEEEcCCCee--eCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce-Eeeccc
Confidence 5555555555533 2345778889999999999986 5 457777632 2456888999999982 225666
Q ss_pred ChhhHHHHHHHHhhC-----C-cEEEEcCC-cccHH
Q 038599 281 LPQHKEELVELLKKD-----G-ATAMVGDG-INDAP 309 (473)
Q Consensus 281 ~P~~K~~~v~~l~~~-----g-~v~mvGDG-~ND~~ 309 (473)
.|.--.++++++-.. . .++||||- ..|..
T Consensus 119 KP~ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~ 154 (190)
T KOG2961|consen 119 KPACTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIV 154 (190)
T ss_pred CCCccHHHHHHHhCCcccCChhHeEEEccchhhhHh
Confidence 788888999988764 2 69999997 45644
No 304
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=27.17 E-value=88 Score=31.89 Aligned_cols=67 Identities=10% Similarity=0.168 Sum_probs=46.9
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++.+.++-++.+++. |++ .+++-||++.... ..|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 64 vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~~~~l~~~~te~ell~~I~~lN~D 142 (345)
T PLN02897 64 IAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSLLAELPEDCTEGQILSALRKFNED 142 (345)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4678899999999999887 765 3467788876554 56789999743222 333455667777777655
No 305
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=26.98 E-value=3.7e+02 Score=26.95 Aligned_cols=106 Identities=21% Similarity=0.149 Sum_probs=65.1
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCe-EEEEcCCC-HHH-H------HHHHHHcCCCc-
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIK-SFILAGDS-HAA-A------LYAQDQLDHAF- 273 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~-v~mlTGD~-~~~-a------~~~a~~~gi~~- 273 (473)
.+.+.+.+..++.+.......++-.+.-.-+.++.++.+.|-++|++ +.+++|.. ..+ . ....++.|+..
T Consensus 130 ~~~l~~~~~P~V~i~~~~~~~~~~~V~~Dn~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~Gf~~al~~~~~~~~ 209 (333)
T COG1609 130 LELLAAAGIPVVVIDRSPPGLGVPSVGIDNFAGAYLATEHLIELGHRRIAFIGGPLDSSASRERLEGYRAALREAGLPIN 209 (333)
T ss_pred HHHHHhcCCCEEEEeCCCccCCCCEEEEChHHHHHHHHHHHHHCCCceEEEEeCCCccccHhHHHHHHHHHHHHCCCCCC
Confidence 34455556666655543222233333344477899999999999987 88999973 222 2 24456777763
Q ss_pred --cceehccChhhHHHHHHHHhhCC----cEEEEcCCcccHHHHH
Q 038599 274 --DMVYAELLPQHKEELVELLKKDG----ATAMVGDGINDAPALA 312 (473)
Q Consensus 274 --~~v~a~~~P~~K~~~v~~l~~~g----~v~mvGDG~ND~~al~ 312 (473)
..+.+..++++-.+..+.+-..+ ...++ .||.-|+.
T Consensus 210 ~~~i~~~~~~~~~g~~~~~~ll~~~~~~ptAif~---~nD~~Alg 251 (333)
T COG1609 210 PEWIVEGDFSEESGYEAAERLLARGEPRPTAIFC---ANDLMALG 251 (333)
T ss_pred cceEEecCCChHHHHHHHHHHHhcCCCCCcEEEE---cCcHHHHH
Confidence 23445567888888877776543 35666 67755544
No 306
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=26.84 E-value=4.1e+02 Score=26.32 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=70.1
Q ss_pred EEEEEecCccCCchHHHHHHHHhCC--Ce------EEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhC
Q 038599 224 VGTFSLSDSCRSGALEAIKDLKSLG--IK------SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 224 lG~i~l~d~lr~~a~~~I~~L~~~g--i~------v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~ 295 (473)
++++.-.-..+++..+.++.|++.. .. +--.|-+....+..+|+++.+. .|.+.-....=.++.+--++.
T Consensus 156 v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m--iVVGg~nSsNT~rL~ei~~~~ 233 (280)
T TIGR00216 156 LGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM--IVIGGKNSSNTTRLYEIAEEH 233 (280)
T ss_pred EEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE--EEECCCCCchHHHHHHHHHHh
Confidence 6666655666778899999999876 22 3356888899999999998876 777777666666777777777
Q ss_pred C-cEEEEcCC-cccHHHHHHC-CeeEEeCCCC
Q 038599 296 G-ATAMVGDG-INDAPALAAV-DIGISMGISG 324 (473)
Q Consensus 296 g-~v~mvGDG-~ND~~al~~A-dvgIa~g~~~ 324 (473)
| ++..+.+- .-|...|+.. .|||.-|.|.
T Consensus 234 ~~~t~~Ie~~~el~~~~l~~~~~VGiTAGAST 265 (280)
T TIGR00216 234 GPPSYLIETAEELPEEWLKGVKVVGITAGAST 265 (280)
T ss_pred CCCEEEECChHHCCHHHhCCCCEEEEEecCCC
Confidence 7 78888653 2244456644 3688877333
No 307
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=26.79 E-value=6.4e+02 Score=25.03 Aligned_cols=96 Identities=13% Similarity=0.142 Sum_probs=63.9
Q ss_pred chHHHHHHHHhC-CC-eEEEEcCCCHHHHHHHHHHcCCCccce-ehccChhhHHHHHHHHhhC--C-cEEEEcC-CcccH
Q 038599 236 GALEAIKDLKSL-GI-KSFILAGDSHAAALYAQDQLDHAFDMV-YAELLPQHKEELVELLKKD--G-ATAMVGD-GINDA 308 (473)
Q Consensus 236 ~a~~~I~~L~~~-gi-~v~mlTGD~~~~a~~~a~~~gi~~~~v-~a~~~P~~K~~~v~~l~~~--g-~v~mvGD-G~ND~ 308 (473)
+..++++.+|+. +. +.+-++=++.+.+...+ +.|.+ .+ ..+++|++-.+.++.+++. . .+...|- ..+++
T Consensus 181 ~i~~av~~~r~~~~~~~~I~VEv~tleea~eA~-~~GaD--~I~LDn~~~e~l~~av~~~~~~~~~i~leAsGGIt~~ni 257 (288)
T PRK07428 181 GIGEAITRIRQRIPYPLTIEVETETLEQVQEAL-EYGAD--IIMLDNMPVDLMQQAVQLIRQQNPRVKIEASGNITLETI 257 (288)
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCCHHHHHHHH-HcCCC--EEEECCCCHHHHHHHHHHHHhcCCCeEEEEECCCCHHHH
Confidence 578899999985 42 33556667877776544 67765 44 7889999999999988753 3 4555552 34567
Q ss_pred HHHHHCCe-eEEeCCCCCccccccccEEE
Q 038599 309 PALAAVDI-GISMGISGSALAMESGHVIL 336 (473)
Q Consensus 309 ~al~~Adv-gIa~g~~~~~~a~~~ad~vl 336 (473)
+.+++++| +|++| +... .....|+-+
T Consensus 258 ~~ya~tGvD~Isvg-sl~~-sa~~~Dis~ 284 (288)
T PRK07428 258 RAVAETGVDYISSS-APIT-RSPWLDLSM 284 (288)
T ss_pred HHHHHcCCCEEEEc-hhhh-CCCccceEE
Confidence 78888888 77775 3222 124556544
No 308
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both strongly stimulated by the formation of the complex. The alpha subunit catalyzes the cleavage of indole 3-glycerol phosphate (IGP) to indole and d-glyceraldehyde 3-phosphate (G3P). Indole is then channeled to the active site of the beta subunit, a PLP-dependent enzyme that catalyzes a replacement reaction to convert L-serine into L-tryptophan.
Probab=26.79 E-value=3.3e+02 Score=26.03 Aligned_cols=74 Identities=19% Similarity=0.170 Sum_probs=44.1
Q ss_pred CchHHHHHHHHhCCCeEEE-EcCCC-HHHHHHHHH-HcCCC----ccceehccC--hhhHHHHHHHHhhCC-cEEEEcCC
Q 038599 235 SGALEAIKDLKSLGIKSFI-LAGDS-HAAALYAQD-QLDHA----FDMVYAELL--PQHKEELVELLKKDG-ATAMVGDG 304 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~m-lTGD~-~~~a~~~a~-~~gi~----~~~v~a~~~--P~~K~~~v~~l~~~g-~v~mvGDG 304 (473)
++..+.++.+++.|++.++ ++-.. ....+.+++ ..|+. ..-+++.-+ +.+-.+.++.+++.. .-.++|=|
T Consensus 116 ee~~~~~~~~~~~g~~~i~~i~P~T~~~~i~~i~~~~~~~vy~~s~~g~tG~~~~~~~~~~~~i~~lr~~~~~pI~vggG 195 (242)
T cd04724 116 EEAEEFREAAKEYGLDLIFLVAPTTPDERIKKIAELASGFIYYVSRTGVTGARTELPDDLKELIKRIRKYTDLPIAVGFG 195 (242)
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCCCEEEEeCCCCCCCccCCChhHHHHHHHHHhcCCCcEEEEcc
Confidence 5778899999999998665 44333 445566666 56653 011122211 234445666666653 55677888
Q ss_pred cccH
Q 038599 305 INDA 308 (473)
Q Consensus 305 ~ND~ 308 (473)
+|+.
T Consensus 196 I~~~ 199 (242)
T cd04724 196 ISTP 199 (242)
T ss_pred CCCH
Confidence 8843
No 309
>PRK08197 threonine synthase; Validated
Probab=26.65 E-value=2.1e+02 Score=29.66 Aligned_cols=70 Identities=20% Similarity=0.171 Sum_probs=47.6
Q ss_pred chHHHHHHHHhCCCeEEE--EcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 236 GALEAIKDLKSLGIKSFI--LAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~m--lTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
++.-.+...++.|.+.++ -||+.-......|+..|+....+..+-.|+.|.. .++..| .|..++....|+
T Consensus 114 ga~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~---~~~~~GA~Vi~v~~~~~~~ 186 (394)
T PRK08197 114 GLAVGVSRAKELGVKHLAMPTNGNAGAAWAAYAARAGIRATIFMPADAPEITRL---ECALAGAELYLVDGLISDA 186 (394)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCHHHHH---HHHHcCCEEEEECCCHHHH
Confidence 356677888888886554 4576666777888999998555555555666644 555667 788887555554
No 310
>PRK03515 ornithine carbamoyltransferase subunit I; Provisional
Probab=26.30 E-value=2.8e+02 Score=28.18 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=58.3
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---h
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---P 282 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P 282 (473)
...+-|..++++..+..-+ .-.+..+++++.|.+. ..++++-......+..+++..+++ .+-+.-. |
T Consensus 66 A~~~LGg~~i~l~~~~s~~-------~kgEsl~Dtarvls~y-~D~Iv~R~~~~~~~~~~a~~~~vP--VINa~~~~~HP 135 (336)
T PRK03515 66 AAYDQGARVTYLGPSGSQI-------GHKESIKDTARVLGRM-YDGIQYRGYGQEIVETLAEYAGVP--VWNGLTNEFHP 135 (336)
T ss_pred HHHHcCCcEEEeCCccccC-------CCCCCHHHHHHHHHHh-CcEEEEEeCChHHHHHHHHhCCCC--EEECCCCCCCh
Confidence 3445577777664332111 1256778888888887 778888888888999999999987 5544322 3
Q ss_pred h----hHHHHHHHHh---hCC-cEEEEcCCcc
Q 038599 283 Q----HKEELVELLK---KDG-ATAMVGDGIN 306 (473)
Q Consensus 283 ~----~K~~~v~~l~---~~g-~v~mvGDG~N 306 (473)
- |-..+.+.+. -+| +++++||+.|
T Consensus 136 tQaLaDl~Ti~e~~g~~~l~g~~ia~vGD~~~ 167 (336)
T PRK03515 136 TQLLADLLTMQEHLPGKAFNEMTLAYAGDARN 167 (336)
T ss_pred HHHHHHHHHHHHHhCCCCcCCCEEEEeCCCcC
Confidence 2 3333434431 236 8999999844
No 311
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=25.98 E-value=2.8e+02 Score=27.51 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=56.0
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccc-eehccCh
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDM-VYAELLP 282 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~-v~a~~~P 282 (473)
+.+...+|..+.++..-|.+ .+.|+.. ..++.++++|+++.++-|-+...+.. -..|++.+. .|....|
T Consensus 77 i~~~l~~G~~ValvSdaGdP----~I~dpg~----~Lv~~~~~~gi~v~vIPGiSA~~aA~--a~sG~~~~~f~f~Gflp 146 (287)
T PRK14994 77 LLAKLQEGQNIALVSDAGTP----LINDPGY----HLVRTCREAGIRVVPLPGPCAAITAL--SAAGLPSDRFCYEGFLP 146 (287)
T ss_pred HHHHHHCCCeEEEEccCCCC----ceeCCHH----HHHHHHHHCCCCEEEeCCHHHHHHHH--HHcCCCCCcceEeEECC
Confidence 44556678887776533322 2444433 67888999999999999988766544 457776443 3555666
Q ss_pred h---hHHHHHHHHhhCC--cEEEEc
Q 038599 283 Q---HKEELVELLKKDG--ATAMVG 302 (473)
Q Consensus 283 ~---~K~~~v~~l~~~g--~v~mvG 302 (473)
. ++.+.++.+.+.+ .|.|-+
T Consensus 147 ~~~~~r~~~L~~l~~~~~t~V~yes 171 (287)
T PRK14994 147 AKSKGRRDALKALEAEPRTLIFYES 171 (287)
T ss_pred CCCchHHHHHHHHhcCCCeEEEEEE
Confidence 4 3345566665554 466654
No 312
>cd00079 HELICc Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may not be an autonomously folding unit, but an integral part of the helicase; 4 helicase superfamilies at present according to the organization of their signature motifs; all helicases share the ability to unwind nucleic acid duplexes with a distinct directional polarity; they utilize the free energy from nucleoside triphosphate hydrolysis to fuel their translocation along DNA, unwinding the duplex in the process
Probab=25.94 E-value=2.9e+02 Score=22.45 Aligned_cols=32 Identities=6% Similarity=0.120 Sum_probs=23.3
Q ss_pred CCCccceehccChhhHHHHHHHHhhCC-cEEEE
Q 038599 270 DHAFDMVYAELLPQHKEELVELLKKDG-ATAMV 301 (473)
Q Consensus 270 gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mv 301 (473)
+.....++++++++++..+++.+++.. .+++.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ili~ 84 (131)
T cd00079 52 GIKVAALHGDGSQEEREEVLKDFREGEIVVLVA 84 (131)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHcCCCcEEEE
Confidence 444346778888999999999998876 44443
No 313
>cd04906 ACT_ThrD-I_1 First of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes the first of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.90 E-value=77 Score=24.93 Aligned_cols=37 Identities=27% Similarity=0.245 Sum_probs=27.2
Q ss_pred EEEecCcc-CCchHHHHHHHHhCCCeEEEEcCCCHHHHH
Q 038599 226 TFSLSDSC-RSGALEAIKDLKSLGIKSFILAGDSHAAAL 263 (473)
Q Consensus 226 ~i~l~d~l-r~~a~~~I~~L~~~gi~v~mlTGD~~~~a~ 263 (473)
.+.++-+- ++...++++.|+++|+++...| |+.....
T Consensus 43 ~i~ie~~~~~~~~~~i~~~L~~~G~~~~~~~-~~~~~~~ 80 (85)
T cd04906 43 FVGVSVANGAEELAELLEDLKSAGYEVVDLS-DDELAKT 80 (85)
T ss_pred EEEEEeCCcHHHHHHHHHHHHHCCCCeEECC-CCHHHHH
Confidence 45566665 7788999999999999988766 4544433
No 314
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=25.71 E-value=65 Score=30.63 Aligned_cols=51 Identities=18% Similarity=0.167 Sum_probs=39.0
Q ss_pred eEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcC-CCHHHHHHHHHHcCCC
Q 038599 222 TPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAG-DSHAAALYAQDQLDHA 272 (473)
Q Consensus 222 ~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTG-D~~~~a~~~a~~~gi~ 272 (473)
.+++.-++.-..-++-++.++.|++.|+|-.+++| --....+.+++++|-+
T Consensus 157 d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGApvtq~~a~~iGAD 208 (227)
T COG5012 157 DLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGAPVTQDWADKIGAD 208 (227)
T ss_pred cEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCccccHHHHHHhCCC
Confidence 46676667777777899999999999999555554 3344567889999986
No 315
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=25.71 E-value=2.3e+02 Score=27.57 Aligned_cols=72 Identities=15% Similarity=0.156 Sum_probs=43.7
Q ss_pred CccCCchHHHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcC-------CCccceehccChhhHHHHHHHHhhCCcEEE
Q 038599 231 DSCRSGALEAIKDLKSLGIKSFILAGDSHAAAL---YAQDQLD-------HAFDMVYAELLPQHKEELVELLKKDGATAM 300 (473)
Q Consensus 231 d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~---~~a~~~g-------i~~~~v~a~~~P~~K~~~v~~l~~~g~v~m 300 (473)
+...++-.+.|++.+++|+.-.+.+|.+..... .+|++.. +.+.. ..+..+++-..+.+.+..+.+|..
T Consensus 13 ~~~~~d~~~vi~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~~v~~~~G~HP~~-~~~~~~~~~~~l~~~~~~~~~vva 91 (256)
T COG0084 13 EEFDEDRDEVIARAREAGVKKMVVVGTDLEDFKRALELAEKYPNVYAAVGVHPLD-ADEHSEEDLEELEQLAEHHPKVVA 91 (256)
T ss_pred hhhcCCHHHHHHHHHHcCCcEEEEeecCHHHHHHHHHHHHhCCCeEEEEeeCCCc-cccccHHHHHHHHHHHhcCCCeEE
Confidence 345667788999999999999999999876654 5555544 22212 112223333344444443246777
Q ss_pred EcC
Q 038599 301 VGD 303 (473)
Q Consensus 301 vGD 303 (473)
+|.
T Consensus 92 IGE 94 (256)
T COG0084 92 IGE 94 (256)
T ss_pred EEe
Confidence 774
No 316
>smart00023 COLIPASE Colipase. Colipase is a protein that functions as a cofactor for pancreatic lipase, with which it forms a stoichiometric complex. It also binds to the bile-salt covered triacylglycerol interface thus allowing the enzyme to anchor itself to the water-lipid interface. Colipase is a small protein of approximately 100 amino-acid residues with five conserved disulfide bonds.
Probab=25.66 E-value=43 Score=26.95 Aligned_cols=27 Identities=30% Similarity=0.655 Sum_probs=20.9
Q ss_pred hcccccCCCcccccccccccccccccc
Q 038599 436 LNVKNCRSRCCEATSAKDMASTSLQGQ 462 (473)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (473)
+++.+|.|+||-..+....++..-+.+
T Consensus 18 l~s~QC~S~CCq~d~~l~~ArCa~Kas 44 (95)
T smart00023 18 LNSAQCKSGCCQHDSGLSLARCAPKAS 44 (95)
T ss_pred cchhhcCccccccccccchhhcccccc
Confidence 889999999999888776666554444
No 317
>PLN02342 ornithine carbamoyltransferase
Probab=25.64 E-value=3e+02 Score=28.11 Aligned_cols=90 Identities=16% Similarity=0.110 Sum_probs=55.4
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---hh
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---PQ 283 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P~ 283 (473)
..+-|..++++..+.. .-.-.+..+++++-|.+. ..++++-.........+++..+++ .|-+.-. |-
T Consensus 107 ~~~LGg~~i~l~~~~s-------s~~kGESl~DTarvLs~y-~D~IviR~~~~~~~~~la~~~~vP--VINA~~~~~HPt 176 (348)
T PLN02342 107 FFLLGGHALYLGPDDI-------QLGKREETRDIARVLSRY-NDIIMARVFAHQDVLDLAEYSSVP--VINGLTDYNHPC 176 (348)
T ss_pred HHHcCCcEEEeCcccc-------cCCCCcCHHHHHHHHHHh-CCEEEEeCCChHHHHHHHHhCCCC--EEECCCCCCChH
Confidence 4455666666532211 111246678888888877 677777767778889999998887 5554322 22
Q ss_pred ----hHHHHHHHHhh-CC-cEEEEcCCcc
Q 038599 284 ----HKEELVELLKK-DG-ATAMVGDGIN 306 (473)
Q Consensus 284 ----~K~~~v~~l~~-~g-~v~mvGDG~N 306 (473)
|-..+.+.+.. +| +|+++||+.|
T Consensus 177 QaLaDl~Ti~e~~G~l~glkva~vGD~~n 205 (348)
T PLN02342 177 QIMADALTIIEHIGRLEGTKVVYVGDGNN 205 (348)
T ss_pred HHHHHHHHHHHHhCCcCCCEEEEECCCch
Confidence 22333333322 26 8999999877
No 318
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=25.57 E-value=54 Score=27.45 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.4
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHH
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAA 261 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~ 261 (473)
-++..++++.+|++|.+++.+|+.....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~ 86 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGST 86 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCCh
Confidence 3468899999999999999999876543
No 319
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=25.48 E-value=1.1e+02 Score=30.78 Aligned_cols=82 Identities=21% Similarity=0.312 Sum_probs=50.1
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCc---------------------cceehccChhhHH
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ-DQLDHAF---------------------DMVYAELLPQHKE 286 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a-~~~gi~~---------------------~~v~a~~~P~~K~ 286 (473)
+.|.+|. .+.|+++|+.|.++.+++--.-..+...+ ..-|++- -++.+++-|.+..
T Consensus 163 vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~mqgRL~~~~~~ 240 (319)
T PRK09479 163 VLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATAFPDTGVDILMGIGGAPEGVLAAAALKCLGGEMQGRLLPRNEE 240 (319)
T ss_pred EEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCeeEEEEcCcChHHHHHHHHHHhcCceeEEeECCCCHH
Confidence 4465555 58999999999999999843333343333 2223321 0667777665444
Q ss_pred HHHHHHhh---------------CC-cEEEEcCCcccHHHHH
Q 038599 287 ELVELLKK---------------DG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 287 ~~v~~l~~---------------~g-~v~mvGDG~ND~~al~ 312 (473)
+.-+..+. .| .|.|+.-|+.|-.-|+
T Consensus 241 e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 241 ERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred HHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 43333221 14 6888888888877665
No 320
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.34 E-value=1.1e+02 Score=30.36 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=45.0
Q ss_pred cCccCCchHHHHHHHHh-CCCe---EEEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 230 SDSCRSGALEAIKDLKS-LGIK---SFILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~-~gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
.++++.+.++-++.|++ .|++ .+++-||++.... ..|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vgdd~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~D 87 (281)
T PRK14183 10 SDKIKENVKKEVDELKLVKNIVPGLAVILVGDDPASHTYVKMKAKACDRVGIYSITHEMPSTISQKEILETIAMMNNN 87 (281)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 45678888999999986 5665 3456688876554 5678999974422 2334566677777777655
No 321
>COG1157 FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=25.31 E-value=1.2e+02 Score=31.74 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=53.5
Q ss_pred eEEEEEEecCccCCchHHHHH-HHHhCCCe---EEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-
Q 038599 222 TPVGTFSLSDSCRSGALEAIK-DLKSLGIK---SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG- 296 (473)
Q Consensus 222 ~~lG~i~l~d~lr~~a~~~I~-~L~~~gi~---v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g- 296 (473)
..+|+|+ +-=.|++|.|+ .|.+.|.+ +++.|.|...-.+..|... -..+-++++++|
T Consensus 192 ~ViaLIG---ERGREVrEFIE~~Lg~egl~rsViVvATSD~s~l~R~~aa~~---------------At~IAEyFRDqG~ 253 (441)
T COG1157 192 NVIALIG---ERGREVREFIEKDLGEEGLKRSVVVVATSDESALMRLKAAFT---------------ATTIAEYFRDQGK 253 (441)
T ss_pred EEEEEee---ccchhHHHHHHHhcchhhccceEEEEECCCCCHHHHHHHHHH---------------HHHHHHHHHhCCC
Confidence 3444444 44458899997 45555664 5667888876554443322 245678899999
Q ss_pred cEEEEcCCcccHHHHHHCCeeEEeC
Q 038599 297 ATAMVGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 297 ~v~mvGDG~ND~~al~~AdvgIa~g 321 (473)
.|+.+=|...- -|.++-+||+|.|
T Consensus 254 ~VLL~mDSlTR-fA~AqREI~LA~G 277 (441)
T COG1157 254 RVLLIMDSLTR-FAMAQREIGLAAG 277 (441)
T ss_pred eEEEEeecHHH-HHHHHHHHHHhcC
Confidence 89999888764 3556667888886
No 322
>PRK08329 threonine synthase; Validated
Probab=25.31 E-value=3e+02 Score=27.91 Aligned_cols=65 Identities=17% Similarity=0.150 Sum_probs=44.1
Q ss_pred chHHHHHHHHhCCCeEE-EEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcC
Q 038599 236 GALEAIKDLKSLGIKSF-ILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGD 303 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~-mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGD 303 (473)
++...+..+++.|.+.+ ..| |+.-......|...|+....+..+-.|..|...++. .| .|..+..
T Consensus 91 ga~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~---~GA~v~~v~~ 158 (347)
T PRK08329 91 GTYVTVAKLKEEGINEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSR---LGAELHFVEG 158 (347)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHH---cCCEEEEECC
Confidence 56677888888888644 333 666666778889999985545454567777666554 47 7777753
No 323
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=25.19 E-value=3.1e+02 Score=27.37 Aligned_cols=76 Identities=22% Similarity=0.309 Sum_probs=48.8
Q ss_pred cCccCCchHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCccceehccC------------------hhhHHHHHH
Q 038599 230 SDSCRSGALEAIKDLKSLG-IKSFILAGDSHAAALYAQDQLDHAFDMVYAELL------------------PQHKEELVE 290 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~g-i~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~------------------P~~K~~~v~ 290 (473)
+-.+-|...+.|+.+|+.| +++.++|.-.. ..+.+++... +.++..+. -+.=.+-++
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L~~~-dql~~sLdA~~~~~~~~InRP~~~~~~e~ile~L~ 165 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEELKLP-DQLYVSLDAPDEKTFRRINRPHKKDSWEKILEGLE 165 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHhccC-CEEEEEeccCCHHHHHHhcCCCCcchHHHHHHHHH
Confidence 4457889999999999999 79999998777 4445555532 23333332 122223334
Q ss_pred HHhh--CC-cE--EEEcCCcccHH
Q 038599 291 LLKK--DG-AT--AMVGDGINDAP 309 (473)
Q Consensus 291 ~l~~--~g-~v--~mvGDG~ND~~ 309 (473)
.|++ .| .| .|+..|.||..
T Consensus 166 ~~~~~~~~~~vir~tlvkg~N~~~ 189 (296)
T COG0731 166 IFRSEYKGRTVIRTTLVKGINDDE 189 (296)
T ss_pred HhhhcCCCcEEEEEEEeccccCCh
Confidence 4555 45 33 78899999866
No 324
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.13 E-value=82 Score=31.27 Aligned_cols=67 Identities=25% Similarity=0.282 Sum_probs=45.8
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.+|++.++-++.+++. |++ ..++-||++... ...|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 16 iA~~i~~~l~~~i~~l~~~~g~~P~Laii~vg~d~aS~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~LN~D 94 (287)
T PRK14176 16 LAKKIEAEVRSGVERLKSNRGITPGLATILVGDDPASKMYVRLKHKACERVGIRAEDQFLPADTTQEELLELIDSLNKR 94 (287)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4577888999999999887 765 345678876544 46678999974322 2333455677777777655
No 325
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=25.10 E-value=6.4e+02 Score=24.47 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=49.2
Q ss_pred cCccCCchHHHHHHHHhC---CCeEEEEcCCCHHHHHHHHHHcCCCc-----cceehccChhhHHHHHHHHhhC-CcEEE
Q 038599 230 SDSCRSGALEAIKDLKSL---GIKSFILAGDSHAAALYAQDQLDHAF-----DMVYAELLPQHKEELVELLKKD-GATAM 300 (473)
Q Consensus 230 ~d~lr~~a~~~I~~L~~~---gi~v~mlTGD~~~~a~~~a~~~gi~~-----~~v~a~~~P~~K~~~v~~l~~~-g~v~m 300 (473)
.+.+-||..++++..++. |+.+.-.+-|+...++++++- |-.- +-+-++... ...++|+.+.+. +.-.+
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~-G~~~vmPlg~pIGsg~Gi-~~~~~I~~I~e~~~vpVI 179 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA-GCAAVMPLGSPIGSGQGL-LNPYNLRIIIERADVPVI 179 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc-CCCEeCCCCcCCCCCCCC-CCHHHHHHHHHhCCCcEE
Confidence 445789999999999988 999996677888888887654 5431 111222111 125666676665 44457
Q ss_pred EcCCccc
Q 038599 301 VGDGIND 307 (473)
Q Consensus 301 vGDG~ND 307 (473)
++-|++-
T Consensus 180 ~egGI~t 186 (248)
T cd04728 180 VDAGIGT 186 (248)
T ss_pred EeCCCCC
Confidence 7777664
No 326
>PRK13670 hypothetical protein; Provisional
Probab=25.09 E-value=5.9e+02 Score=26.42 Aligned_cols=92 Identities=13% Similarity=0.167 Sum_probs=63.7
Q ss_pred eEEEEEEecCccCCchHHHHHHHHh---CCCeEEEEcCC----------CHHHHHHHHHHcCCCcc----ceehccChhh
Q 038599 222 TPVGTFSLSDSCRSGALEAIKDLKS---LGIKSFILAGD----------SHAAALYAQDQLDHAFD----MVYAELLPQH 284 (473)
Q Consensus 222 ~~lG~i~l~d~lr~~a~~~I~~L~~---~gi~v~mlTGD----------~~~~a~~~a~~~gi~~~----~v~a~~~P~~ 284 (473)
..+|+|+=-|++-.|=+..|++.++ .|..+.+++|+ +...-..++.+.|++.- -.++..+|++
T Consensus 2 k~~GIIaEfdg~H~GH~~~i~~a~~~a~~~~~~~Vmp~~f~qrg~p~i~~~~~R~~~a~~~GvD~vielpf~~a~~sae~ 81 (388)
T PRK13670 2 KVTGIIVEYNPFHNGHLYHLNQAKKLTNADVTIAVMSGNFVQRGEPAIVDKWTRAKMALENGVDLVVELPFLYSVQSADF 81 (388)
T ss_pred ceeEEEeeeCCcCHHHHHHHHHHHHHHhCCCcEEEecHHHhCCCCCCCCCHHHHHHHHHHcCCCEEEEeCCchHhCCHHH
Confidence 4578888889998888888877765 37777777877 44555688889998721 2277888877
Q ss_pred HHH-HHHHHhhCC-cEEEEcCCcccHHHHHH
Q 038599 285 KEE-LVELLKKDG-ATAMVGDGINDAPALAA 313 (473)
Q Consensus 285 K~~-~v~~l~~~g-~v~mvGDG~ND~~al~~ 313 (473)
=++ .|+.|...| ..+.+|.-..|...|+.
T Consensus 82 F~~~aV~iL~~l~v~~lv~G~e~g~~~~L~~ 112 (388)
T PRK13670 82 FAEGAVSILDALGVDSLVFGSESGDIEDFQK 112 (388)
T ss_pred HHHhHHHHHHHcCCCEEEEcCCCCCHHHHHH
Confidence 664 344565557 67888877666655544
No 327
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=25.01 E-value=56 Score=28.14 Aligned_cols=16 Identities=25% Similarity=0.584 Sum_probs=9.5
Q ss_pred chhHHHHHHHHHHHHH
Q 038599 6 KWPAPSVMASGLLLAL 21 (473)
Q Consensus 6 ~~~~~~~i~~~i~~~~ 21 (473)
||..++++++++++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 5766666666555444
No 328
>COG0313 Predicted methyltransferases [General function prediction only]
Probab=24.99 E-value=3.4e+02 Score=26.74 Aligned_cols=83 Identities=20% Similarity=0.298 Sum_probs=57.5
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-ceehccCh
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-MVYAELLP 282 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-~v~a~~~P 282 (473)
+..+..+|..+..+..-|.+ .+.||- .+.+++++++||+|..+-|-+...+.-++ .|++.+ -.|....|
T Consensus 70 li~~l~~g~~valVSDAG~P----~ISDPG----~~LV~~a~~~gi~V~~lPG~sA~~tAL~~--SGl~~~~F~F~GFLP 139 (275)
T COG0313 70 LIPLLKKGKSVALVSDAGTP----LISDPG----YELVRAAREAGIRVVPLPGPSALITALSA--SGLPSQRFLFEGFLP 139 (275)
T ss_pred HHHHHhcCCeEEEEecCCCC----cccCcc----HHHHHHHHHcCCcEEecCCccHHHHHHHH--cCCCCCCeeEeccCC
Confidence 45566777777777665544 366663 35788999999999999999988776665 566654 45666665
Q ss_pred h---hHHHHHHHHhhCC
Q 038599 283 Q---HKEELVELLKKDG 296 (473)
Q Consensus 283 ~---~K~~~v~~l~~~g 296 (473)
. ++.+.++.+++..
T Consensus 140 ~k~~~R~~~l~~l~~~~ 156 (275)
T COG0313 140 RKSKERRKRLEALANEP 156 (275)
T ss_pred CCccHHHHHHHHHHhcC
Confidence 4 5555566666655
No 329
>PRK06260 threonine synthase; Validated
Probab=24.95 E-value=2.5e+02 Score=29.12 Aligned_cols=70 Identities=16% Similarity=0.153 Sum_probs=46.7
Q ss_pred chHHHHHHHHhCCCeEEE--EcCCCHHHHHHHHHHcCCCccceehcc-ChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 236 GALEAIKDLKSLGIKSFI--LAGDSHAAALYAQDQLDHAFDMVYAEL-LPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~m--lTGD~~~~a~~~a~~~gi~~~~v~a~~-~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
++...|..+++.|.+.++ -||+.-......|+..|+....+..+- .|..|...+ +..| .|..++++..|+
T Consensus 102 ga~~~v~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~~~~i~vP~~~~~~~k~~~~---~~~GA~vi~v~~~~~~~ 175 (397)
T PRK06260 102 GMTVGVTKALELGVKTVACASTGNTSASLAAYAARAGLKCYVLLPAGKVALGKLAQA---LLHGAKVLEVDGNFDDA 175 (397)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEEeCCCccHHHHHHH---HhcCCEEEEECCcHHHH
Confidence 456678888888886444 356666666688899999854444432 456676654 4568 898998766664
No 330
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=24.88 E-value=1.2e+02 Score=35.06 Aligned_cols=80 Identities=15% Similarity=0.258 Sum_probs=53.1
Q ss_pred EEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCcc-----------ceehccChhhHHHHHHHHhh
Q 038599 226 TFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFD-----------MVYAELLPQHKEELVELLKK 294 (473)
Q Consensus 226 ~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~-----------~v~a~~~P~~K~~~v~~l~~ 294 (473)
-+.-.+.+-.|..|.++....+|+|++-+-+.+..+. .+.+...+.++ -|+-+-.-++-...|+.|++
T Consensus 641 ~ic~p~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~-~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~ 719 (1140)
T KOG0208|consen 641 EICKPETVPADYQEVLKEYTHQGFRVIALASKELETS-TLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNR 719 (1140)
T ss_pred HhcCcccCCccHHHHHHHHHhCCeEEEEEecCccCcc-hHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHh
Confidence 3444566677899999999999999998877765554 33333333333 23444444555678899988
Q ss_pred CC--cEEEEcCCcc
Q 038599 295 DG--ATAMVGDGIN 306 (473)
Q Consensus 295 ~g--~v~mvGDG~N 306 (473)
.+ .|+..||..-
T Consensus 720 AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 720 ANIRTVMCTGDNLL 733 (1140)
T ss_pred hcceEEEEcCCchh
Confidence 87 5666688753
No 331
>PF14097 SpoVAE: Stage V sporulation protein AE1
Probab=24.84 E-value=1.3e+02 Score=27.41 Aligned_cols=52 Identities=29% Similarity=0.396 Sum_probs=30.7
Q ss_pred eEEEEc-CCC--HHHHHHHHHHcCCCccce---ehccChhhHHHHHHHHhhC---CcEEEEcC
Q 038599 250 KSFILA-GDS--HAAALYAQDQLDHAFDMV---YAELLPQHKEELVELLKKD---GATAMVGD 303 (473)
Q Consensus 250 ~v~mlT-GD~--~~~a~~~a~~~gi~~~~v---~a~~~P~~K~~~v~~l~~~---g~v~mvGD 303 (473)
+|+++| ||. ..+.+.+|+++|-. .+ .++.+|-.=.++|+..++. ..+.|+-|
T Consensus 1 kVIlvTDGD~~A~ravE~aa~~iGgR--CIS~S~GNPT~lsG~elV~lIk~a~~DPV~VMfDD 61 (180)
T PF14097_consen 1 KVILVTDGDEYAKRAVEIAAKNIGGR--CISQSAGNPTPLSGEELVELIKQAPHDPVLVMFDD 61 (180)
T ss_pred CEEEEECChHHHHHHHHHHHHHhCcE--EEeccCCCCCcCCHHHHHHHHHhCCCCCEEEEEeC
Confidence 456666 665 46677888888854 22 3444554455555555543 35677744
No 332
>PF14862 Defensin_big: Big defensin; PDB: 2RQ2_A 2RNG_A.
Probab=24.70 E-value=17 Score=28.09 Aligned_cols=32 Identities=31% Similarity=0.458 Sum_probs=18.5
Q ss_pred hhcccccCCCcccccccccccccccccccCCCCccC
Q 038599 435 ALNVKNCRSRCCEATSAKDMASTSLQGQTGPNPCCF 470 (473)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (473)
....+-|.+.|+-.+-+.- .. -.+||+.+||-
T Consensus 44 annRGwCRs~Cf~~Ey~d~--~~--s~~CGsy~CCr 75 (76)
T PF14862_consen 44 ANNRGWCRSRCFSHEYIDW--YN--SDVCGSYKCCR 75 (76)
T ss_dssp TTTTEEEESS--TT-EE-T--TT--HHHH-SSEEEE
T ss_pred cCCCCccccchhhhhhhhh--cc--ccccccccccC
Confidence 3466779999987776551 11 35799999995
No 333
>PLN02550 threonine dehydratase
Probab=24.70 E-value=2e+02 Score=31.73 Aligned_cols=71 Identities=21% Similarity=0.257 Sum_probs=48.5
Q ss_pred chHHHHHHHH-hCCCe-EEE-EcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 236 GALEAIKDLK-SLGIK-SFI-LAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 236 ~a~~~I~~L~-~~gi~-v~m-lTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
++...|.+|. +...+ ++- -+|.+-..+...|+++|+....+..+-+|..|.+.+ +..| .|..+||...|+.
T Consensus 143 GA~n~I~~L~~e~~~~GVV~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~---r~~GAeVvl~g~~~dea~ 217 (591)
T PLN02550 143 GAYNMMAKLPKEQLDKGVICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSV---ERLGATVVLVGDSYDEAQ 217 (591)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH---HHcCCEEEEeCCCHHHHH
Confidence 4555666663 22221 333 446666677788999999877777778898886665 4557 8999998777654
No 334
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.61 E-value=1e+02 Score=30.77 Aligned_cols=67 Identities=19% Similarity=0.226 Sum_probs=45.6
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHH------HHHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAA------LYAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a------~~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++-++.+++. |++ ..++-||++... ...|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 10 va~~i~~~lk~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~e~~l~~~I~~lN~d 88 (294)
T PRK14187 10 IANDITEILATCIDDLKRQHNLFPCLIVILVGDDPASQLYVRNKQRKAEMLGLRSETILLPSTISESSLIEKINELNND 88 (294)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3567788999999999877 776 356678887554 466789999744322 233455566777777655
No 335
>KOG0541 consensus Alkyl hydroperoxide reductase/peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=24.46 E-value=1.3e+02 Score=27.15 Aligned_cols=61 Identities=20% Similarity=0.113 Sum_probs=43.5
Q ss_pred CCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCe-EEEEcCCCHHHHHHHHHHcCCC
Q 038599 210 GGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIK-SFILAGDSHAAALYAQDQLDHA 272 (473)
Q Consensus 210 ~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~-v~mlTGD~~~~a~~~a~~~gi~ 272 (473)
+|+.++.+..-+-|-..- .-.--|+-.+-.++|+..|+. ++.+|.|++-...+.++.+|..
T Consensus 42 ~GKKvIifGvPgAFtPtC--s~~HvPGyi~~a~elksKGVd~iicvSVnDpFv~~aW~k~~g~~ 103 (171)
T KOG0541|consen 42 KGKKVILFGVPGAFTPTC--SSSHVPGYIEKADELKSKGVDEIICVSVNDPFVMKAWAKSLGAN 103 (171)
T ss_pred CCceEEEEcCCCccCCcc--ccccCchHHHHHHHHHhcCCcEEEEEecCcHHHHHHHHhhcCcc
Confidence 456666665544332211 122346778888999999997 7789999999999999999864
No 336
>PRK06846 putative deaminase; Validated
Probab=24.23 E-value=7.6e+02 Score=25.43 Aligned_cols=85 Identities=14% Similarity=0.089 Sum_probs=51.4
Q ss_pred hHHHHHHHHhCCCeEEE--EcCCCH-----HHHHHHHHHcCCCccceehcc------ChhhHHHHHHHHhhCC-cEEE--
Q 038599 237 ALEAIKDLKSLGIKSFI--LAGDSH-----AAALYAQDQLDHAFDMVYAEL------LPQHKEELVELLKKDG-ATAM-- 300 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~m--lTGD~~-----~~a~~~a~~~gi~~~~v~a~~------~P~~K~~~v~~l~~~g-~v~m-- 300 (473)
..+..+..++.|..+.+ --..+. .......++.|+......+.+ +.++-.++++.+++.| .|.-
T Consensus 208 l~~~~~lA~~~g~~v~~Hv~e~~~~~~~~~~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~ 287 (410)
T PRK06846 208 LDTMFQIAVDFNKGVDIHLHDTGPLGVATIKYLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITSTV 287 (410)
T ss_pred HHHHHHHHHHhCCCcEEEECCCCChhHHHHHHHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeC
Confidence 44555555666765443 322221 122345556676443333332 4445556678898888 4433
Q ss_pred -EcCCcccHHHHHHCCeeEEeC
Q 038599 301 -VGDGINDAPALAAVDIGISMG 321 (473)
Q Consensus 301 -vGDG~ND~~al~~AdvgIa~g 321 (473)
.|.|......|.++++-+++|
T Consensus 288 ~~~~g~~p~~~l~~~Gv~v~lG 309 (410)
T PRK06846 288 PIGRLHMPIPLLHDKGVKVSLG 309 (410)
T ss_pred CCCCCCCCHHHHHhCCCeEEEe
Confidence 488899999999999999986
No 337
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=24.21 E-value=4.5e+02 Score=23.78 Aligned_cols=84 Identities=21% Similarity=0.244 Sum_probs=55.9
Q ss_pred chHHHHHHHHhCC-Ce-EEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC--cEEEEcCCc--ccHH
Q 038599 236 GALEAIKDLKSLG-IK-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG--ATAMVGDGI--NDAP 309 (473)
Q Consensus 236 ~a~~~I~~L~~~g-i~-v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g--~v~mvGDG~--ND~~ 309 (473)
+..++++++++.. -. .+.+-.++.+.+.... +.|.+ -...-+++|++-.++++.++..+ ....+--|+ ++.+
T Consensus 65 ~i~~av~~~~~~~~~~~~I~VEv~~~ee~~ea~-~~g~d-~I~lD~~~~~~~~~~v~~l~~~~~~v~ie~SGGI~~~ni~ 142 (169)
T PF01729_consen 65 GIEEAVKAARQAAPEKKKIEVEVENLEEAEEAL-EAGAD-IIMLDNMSPEDLKEAVEELRELNPRVKIEASGGITLENIA 142 (169)
T ss_dssp SHHHHHHHHHHHSTTTSEEEEEESSHHHHHHHH-HTT-S-EEEEES-CHHHHHHHHHHHHHHTTTSEEEEESSSSTTTHH
T ss_pred CHHHHHHHHHHhCCCCceEEEEcCCHHHHHHHH-HhCCC-EEEecCcCHHHHHHHHHHHhhcCCcEEEEEECCCCHHHHH
Confidence 4778888888752 22 2666778877776643 46654 13467789999999999888664 445554454 5688
Q ss_pred HHHHCCe-eEEeC
Q 038599 310 ALAAVDI-GISMG 321 (473)
Q Consensus 310 al~~Adv-gIa~g 321 (473)
.++..+| .|++|
T Consensus 143 ~ya~~gvD~isvg 155 (169)
T PF01729_consen 143 EYAKTGVDVISVG 155 (169)
T ss_dssp HHHHTT-SEEEEC
T ss_pred HHHhcCCCEEEcC
Confidence 8888887 66775
No 338
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=24.17 E-value=3.9e+02 Score=26.08 Aligned_cols=79 Identities=24% Similarity=0.200 Sum_probs=52.6
Q ss_pred chHHHHHHHHhCCCeEEEEcCCC-----HHHHHHHHHHcCCCccceehccChhhH-----------HHHHHHHhhCCcEE
Q 038599 236 GALEAIKDLKSLGIKSFILAGDS-----HAAALYAQDQLDHAFDMVYAELLPQHK-----------EELVELLKKDGATA 299 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~-----~~~a~~~a~~~gi~~~~v~a~~~P~~K-----------~~~v~~l~~~g~v~ 299 (473)
+..+.-+.|++.++...+=.--+ ..+|..+|++.||+ .+.-+-.|.++ .+.++.+.+.++..
T Consensus 54 ~~e~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gip--y~r~eRP~~~~~gd~~~~V~d~~ea~~~~~~~~~rV 131 (257)
T COG2099 54 GAEGLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIP--YLRLERPPWAPNGDNWIEVADIEEAAEAAKQLGRRV 131 (257)
T ss_pred CHHHHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCc--EEEEECCccccCCCceEEecCHHHHHHHHhccCCcE
Confidence 56667788899999877632222 36677899999998 55444443333 56666777776444
Q ss_pred EEcCCcccHHHHHHCCe
Q 038599 300 MVGDGINDAPALAAVDI 316 (473)
Q Consensus 300 mvGDG~ND~~al~~Adv 316 (473)
|.-=|.++...+..++-
T Consensus 132 flt~G~~~l~~f~~~~~ 148 (257)
T COG2099 132 FLTTGRQNLAHFVAADA 148 (257)
T ss_pred EEecCccchHHHhcCcc
Confidence 55557888888877653
No 339
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=24.12 E-value=1.6e+02 Score=22.75 Aligned_cols=40 Identities=15% Similarity=0.087 Sum_probs=23.8
Q ss_pred ccCCchHHHHHHHHhCCCeEEEE-cCCCHHHHHHHHHHcCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFIL-AGDSHAAALYAQDQLDH 271 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~ml-TGD~~~~a~~~a~~~gi 271 (473)
..++.+.+..+.||+.|+++.+- ++.+......-|++.|+
T Consensus 15 ~~~~~a~~~~~~Lr~~g~~v~~~~~~~~~~k~~~~a~~~g~ 55 (94)
T cd00738 15 EAREYAQKLLNALLANGIRVLYDDRERKIGKKFREADLRGV 55 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEecCCCcCHhHHHHHHHhCCC
Confidence 45667777778888888877762 33444433344444443
No 340
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=24.10 E-value=90 Score=27.40 Aligned_cols=38 Identities=26% Similarity=0.233 Sum_probs=31.6
Q ss_pred cCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCC
Q 038599 233 CRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDH 271 (473)
Q Consensus 233 lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi 271 (473)
+||++.+.++.|.+. +++++.|.-....|..+.+.+.-
T Consensus 37 ~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp 74 (159)
T PF03031_consen 37 LRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDP 74 (159)
T ss_dssp E-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTT
T ss_pred eCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhh
Confidence 499999999999655 99999999999999999999985
No 341
>PRK11761 cysM cysteine synthase B; Provisional
Probab=23.97 E-value=2.9e+02 Score=27.33 Aligned_cols=65 Identities=14% Similarity=0.107 Sum_probs=43.7
Q ss_pred chHHHHHHHHhCCC-----eEEEEcCCC-HHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcC
Q 038599 236 GALEAIKDLKSLGI-----KSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGD 303 (473)
Q Consensus 236 ~a~~~I~~L~~~gi-----~v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGD 303 (473)
.+...+..+.+.|. .++-.|+-| -......|+..|++...+..+-.|..|.+.++. .| .|..+++
T Consensus 46 ~a~~~~~~a~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~---~GA~v~~~~~ 117 (296)
T PRK11761 46 PALSMIVQAEKRGEIKPGDTLIEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRA---YGAELILVPK 117 (296)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHH---cCCEEEEeCC
Confidence 35556777776664 355555444 555667888999986566666667778666554 57 8888886
No 342
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=23.96 E-value=3.6e+02 Score=21.17 Aligned_cols=50 Identities=8% Similarity=0.224 Sum_probs=35.8
Q ss_pred CchHHHHHHHHhCC--CeEEEEcCCCHHHHHHHHHHcCCCccceeh-ccChhhHH
Q 038599 235 SGALEAIKDLKSLG--IKSFILAGDSHAAALYAQDQLDHAFDMVYA-ELLPQHKE 286 (473)
Q Consensus 235 ~~a~~~I~~L~~~g--i~v~mlTGD~~~~a~~~a~~~gi~~~~v~a-~~~P~~K~ 286 (473)
.+..+.++++++.+ .+++++|.........-+.+.|.. .+.. ..+|++-.
T Consensus 56 ~~~~~~~~~i~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~--~~l~kp~~~~~l~ 108 (112)
T PF00072_consen 56 GDGLELLEQIRQINPSIPIIVVTDEDDSDEVQEALRAGAD--DYLSKPFSPEELR 108 (112)
T ss_dssp SBHHHHHHHHHHHTTTSEEEEEESSTSHHHHHHHHHTTES--EEEESSSSHHHHH
T ss_pred ccccccccccccccccccEEEecCCCCHHHHHHHHHCCCC--EEEECCCCHHHHH
Confidence 56778999999865 779999988877777777799987 4443 33444433
No 343
>PRK12483 threonine dehydratase; Reviewed
Probab=23.87 E-value=1.1e+02 Score=33.20 Aligned_cols=53 Identities=23% Similarity=0.288 Sum_probs=40.0
Q ss_pred EcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 254 LAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 254 lTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
-+|.+-..+...|+.+|++...+...-+|..|... ++..| .|..+|+...|+.
T Consensus 92 SaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~---~r~~GAeVil~g~~~d~a~ 145 (521)
T PRK12483 92 SAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDG---VRAHGGEVVLHGESFPDAL 145 (521)
T ss_pred CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHH---HHHCCCEEEEECCCHHHHH
Confidence 34555666778889999987777788889999655 45557 8999998776654
No 344
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=23.86 E-value=66 Score=29.45 Aligned_cols=27 Identities=30% Similarity=0.441 Sum_probs=20.9
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCC
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDS 258 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~ 258 (473)
++-|+|.|++++|++.|...+++|+-.
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~ 99 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARP 99 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-S
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecC
Confidence 466899999999999998877777554
No 345
>PRK09224 threonine dehydratase; Reviewed
Probab=23.78 E-value=1.6e+02 Score=31.74 Aligned_cols=52 Identities=21% Similarity=0.284 Sum_probs=37.9
Q ss_pred cCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 255 AGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 255 TGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
+|.+.......|+.+|++...+..+-+|..|.+.+ +..| .|..+|+...|+.
T Consensus 76 aGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~---r~~GA~Vi~~g~~~~~a~ 128 (504)
T PRK09224 76 AGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAV---RAFGGEVVLHGDSFDEAY 128 (504)
T ss_pred cCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH---HhCCCEEEEECCCHHHHH
Confidence 35555666788899999866667777888886655 4557 8999998665543
No 346
>TIGR03556 photolyase_8HDF deoxyribodipyrimidine photo-lyase, 8-HDF type. This model describes a narrow clade of cyanobacterial deoxyribodipyrimidine photo-lyase. This group, in contrast to several closely related proteins, uses a chromophore that, in other lineages is modified further to become coenzyme F420. This chromophore is called 8-HDF in most articles on the DNA photolyase and FO in most literature on coenzyme F420.
Probab=23.59 E-value=2.5e+02 Score=29.93 Aligned_cols=58 Identities=26% Similarity=0.292 Sum_probs=42.3
Q ss_pred hHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC--hhh---HHHHHHHHhhCC
Q 038599 237 ALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL--PQH---KEELVELLKKDG 296 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~--P~~---K~~~v~~l~~~g 296 (473)
..+.=++|++.|++.++..|+.......++++.++. .|+.+.. |.. -.++.+.|++.|
T Consensus 57 L~~L~~~L~~~G~~L~v~~G~p~~vl~~l~~~~~~~--~V~~~~~~~~~~~~rd~~v~~~l~~~~ 119 (471)
T TIGR03556 57 LQELQQRYQQAGSQLLILQGDPVQLIPQLAQQLGAK--AVYWNLDVEPYGRKRDRAVAAALKEAG 119 (471)
T ss_pred HHHHHHHHHHCCCCeEEEECCHHHHHHHHHHHcCCC--EEEEecccCHHHHHHHHHHHHHHHHCC
Confidence 344446778899999999999999999999999998 7775554 322 233445566666
No 347
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=23.53 E-value=4.7e+02 Score=26.13 Aligned_cols=91 Identities=20% Similarity=0.206 Sum_probs=60.7
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc----C
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL----L 281 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~----~ 281 (473)
...+-|..++++..+.. .+ .-.+..+++++-|.+.|..++++-......+..+++...++ .|-+.. -
T Consensus 66 A~~~LGg~~i~l~~~~~-----~~--~kgEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vP--VINa~~g~~~H 136 (305)
T PRK00856 66 AAKRLGADVINFSASTS-----SV--SKGETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVP--VINAGDGSHQH 136 (305)
T ss_pred HHHHcCCcEEEeCCCcc-----cC--CCCcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCC--EEECCCCCCCC
Confidence 34556777777654322 11 23567788888898888899988888889999999999887 555533 2
Q ss_pred hh----hHHHHHHHHhh-CC-cEEEEcCCc
Q 038599 282 PQ----HKEELVELLKK-DG-ATAMVGDGI 305 (473)
Q Consensus 282 P~----~K~~~v~~l~~-~g-~v~mvGDG~ 305 (473)
|- |-..+.+.+.. +| +|+++||+.
T Consensus 137 PtQ~LaDl~Ti~e~~G~l~g~kv~~vGD~~ 166 (305)
T PRK00856 137 PTQALLDLLTIREEFGRLEGLKVAIVGDIK 166 (305)
T ss_pred cHHHHHHHHHHHHHhCCCCCCEEEEECCCC
Confidence 32 22233333322 36 899999984
No 348
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.49 E-value=1.2e+02 Score=30.10 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=46.6
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCcccee--hccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDMVY--AELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v~--a~~~P~~K~~~v~~l~~~ 295 (473)
+.++++++.++.+++|++. |.+ .+++-||++.... ..|+++||..+.+. .+.+.++-.+.|+.|.+.
T Consensus 11 va~~i~~~lk~~v~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d 89 (285)
T PRK10792 11 IAQQVRSEVAQKVQARVAAGLRAPGLAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNAD 89 (285)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 3566788899999999887 453 3566788876553 56789999754332 345667777778777655
No 349
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=23.48 E-value=3.4e+02 Score=27.59 Aligned_cols=91 Identities=16% Similarity=0.190 Sum_probs=55.6
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---h
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---P 282 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P 282 (473)
...+-|..++++..+.. .+ .-.+..+++++-|.+. ..++++-......+..+++..+++ .|-+.-. |
T Consensus 63 A~~~LGg~~i~l~~~~s-----s~--~kgEsl~Dtarvls~y-~D~iviR~~~~~~~~~~a~~~~vP--VINa~~~~~HP 132 (338)
T PRK02255 63 AMTQLGGHAQYLAPGQI-----QL--GGHESLEDTARVLSRL-VDIIMARVDRHQTVVELAKYATVP--VINGMSDYNHP 132 (338)
T ss_pred HHHHcCCeEEEeCcccc-----cC--CCCcCHHHHHHHHHHh-CcEEEEecCChHHHHHHHHhCCCC--EEECCCCCCCh
Confidence 34456667776643221 11 2256677788877777 667766666677788888888887 5544322 2
Q ss_pred h----hHHHHHHHHh----hCC-cEEEEcCCcc
Q 038599 283 Q----HKEELVELLK----KDG-ATAMVGDGIN 306 (473)
Q Consensus 283 ~----~K~~~v~~l~----~~g-~v~mvGDG~N 306 (473)
- |-..+.+.+. -+| +|+++||+.|
T Consensus 133 tQaLaDl~Ti~e~~g~g~~l~glkv~~vGD~~~ 165 (338)
T PRK02255 133 TQELGDLFTMIEHLPEGKKLEDCKVVFVGDATQ 165 (338)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCEEEEECCCch
Confidence 2 3334444442 236 8999999865
No 350
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=23.07 E-value=3.6e+02 Score=24.44 Aligned_cols=52 Identities=17% Similarity=0.114 Sum_probs=35.7
Q ss_pred chHHHHHHHHhCCCeEEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHH
Q 038599 236 GALEAIKDLKSLGIKSFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVE 290 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~ 290 (473)
+..++.+.+++.|+++.++. |++...-+.+|+.-|= .+|.-.++++-.+++.
T Consensus 124 ~~~~~~~~l~~~~I~v~~IgiG~~~~~L~~ia~~tgG---~~~~~~~~~~l~~~~~ 176 (183)
T cd01453 124 NIYETIDKLKKENIRVSVIGLSAEMHICKEICKATNG---TYKVILDETHLKELLL 176 (183)
T ss_pred hHHHHHHHHHHcCcEEEEEEechHHHHHHHHHHHhCC---eeEeeCCHHHHHHHHH
Confidence 45678899999999977654 7666777888888885 3444455555444443
No 351
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=22.99 E-value=1.3e+02 Score=30.06 Aligned_cols=82 Identities=21% Similarity=0.283 Sum_probs=48.7
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHH-HcCCCc---------------------cceehccChhhHH
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQD-QLDHAF---------------------DMVYAELLPQHKE 286 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~-~~gi~~---------------------~~v~a~~~P~~K~ 286 (473)
+.|.+|. .+.|+++|+.|.++.+++--.-..+...+. .-|++- -++.+++-|++..
T Consensus 160 vLdRpRH--~~lI~eiR~~Gari~Li~DGDV~~ai~~~~~~s~vD~~~GiGGaPEGVlaAaAlkclGG~~qgrL~~~~~~ 237 (309)
T cd01516 160 VLDRPRH--AALIEEIREAGARIKLIPDGDVAAAIATALPGSGVDVLMGIGGAPEGVLAAAALKCLGGEMQGRLLPRNEE 237 (309)
T ss_pred EEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhCCCCCeeEEEECCCChHHHHHHHHHHhCCceeEEEECCCCHH
Confidence 4465555 589999999999999998433333333331 122221 0567777665444
Q ss_pred HHHHHHh---------------hCC-cEEEEcCCcccHHHHH
Q 038599 287 ELVELLK---------------KDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 287 ~~v~~l~---------------~~g-~v~mvGDG~ND~~al~ 312 (473)
+.-+..+ -.| .|.|+.-|+.|..-|+
T Consensus 238 e~~r~~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 238 ERARAREMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred HHHHHHHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 4333222 014 6888888888866665
No 352
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=22.82 E-value=8.7e+02 Score=26.32 Aligned_cols=103 Identities=12% Similarity=0.148 Sum_probs=70.3
Q ss_pred chHHHHHHHHhCCCeEEEEcCCC-HHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAV 314 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~A 314 (473)
|.-.++...++.+-++.+++=++ ...+..++.-++++. .++.-.++++=...|+.++++|.-+.+||++-- ..-+++
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i-~~~~~~~~~e~~~~~~~l~~~G~~~viG~~~~~-~~A~~~ 162 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDI-VQRSYVTEEDARSCVNDLRARGIGAVVGAGLIT-DLAEQA 162 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCce-EEEEecCHHHHHHHHHHHHHCCCCEEECChHHH-HHHHHc
Confidence 56667777777777777777554 466778888888874 356667888999999999999977888998653 233554
Q ss_pred CeeEEeCCCCCccccccccEEEecCCcccHHHHHHHHHHHHHH
Q 038599 315 DIGISMGISGSALAMESGHVILMSNDIRKIPKAIKLARKASTK 357 (473)
Q Consensus 315 dvgIa~g~~~~~~a~~~ad~vl~~~~l~~l~~~i~~~r~~~~~ 357 (473)
++- .++..+. ..+..+++.+.+..+.
T Consensus 163 gl~----------------~ili~s~-esi~~a~~~A~~~~~~ 188 (526)
T TIGR02329 163 GLH----------------GVFLYSA-DSVRQAFDDALDVARA 188 (526)
T ss_pred CCc----------------eEEEecH-HHHHHHHHHHHHHHHH
Confidence 441 1222232 6677777777665443
No 353
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=22.82 E-value=6.2e+02 Score=24.93 Aligned_cols=83 Identities=22% Similarity=0.222 Sum_probs=55.4
Q ss_pred chHHHHHHHHhCC-CeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcc--cHHHHH
Q 038599 236 GALEAIKDLKSLG-IKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGIN--DAPALA 312 (473)
Q Consensus 236 ~a~~~I~~L~~~g-i~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~N--D~~al~ 312 (473)
+..++++..|+.. -+.+-++-++.+.+.... +.|.+- ..+.+++|++-.++++.++.+-.+...| |+| +++.+.
T Consensus 175 ~v~~av~~~r~~~~~~~I~VEv~tleea~eA~-~~gaD~-I~LD~~~~e~l~~~v~~~~~~i~leAsG-GIt~~ni~~~a 251 (277)
T PRK05742 175 GIAQAVAAAHRIAPGKPVEVEVESLDELRQAL-AAGADI-VMLDELSLDDMREAVRLTAGRAKLEASG-GINESTLRVIA 251 (277)
T ss_pred CHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HcCCCE-EEECCCCHHHHHHHHHHhCCCCcEEEEC-CCCHHHHHHHH
Confidence 4466677777663 234566778877765543 566541 2357789998888887664222778887 666 467888
Q ss_pred HCCe-eEEeC
Q 038599 313 AVDI-GISMG 321 (473)
Q Consensus 313 ~Adv-gIa~g 321 (473)
++++ +|++|
T Consensus 252 ~tGvD~Isvg 261 (277)
T PRK05742 252 ETGVDYISIG 261 (277)
T ss_pred HcCCCEEEEC
Confidence 8887 78886
No 354
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=22.79 E-value=1.1e+02 Score=28.29 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=47.3
Q ss_pred HHHhcCCceeeEeee--------------CCeEEEEEEecCccCCchHHHHHHHHhCCC--eE-EEEcCCCHHHHHHHHH
Q 038599 205 EAKCTGGKTRGYVYL--------------GATPVGTFSLSDSCRSGALEAIKDLKSLGI--KS-FILAGDSHAAALYAQD 267 (473)
Q Consensus 205 ~~~~~~G~~vi~va~--------------d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi--~v-~mlTGD~~~~a~~~a~ 267 (473)
.-+...|+.++++.. +-.++|+-.....-.+..++.++.||+.+. ++ +++-|-... ...++
T Consensus 104 ~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~vGG~~~~--~~~~~ 181 (201)
T cd02070 104 TMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVMVGGAPVN--QEFAD 181 (201)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEEEECCcCC--HHHHH
Confidence 344567777777653 335788888778888999999999999987 55 455554432 35888
Q ss_pred HcCCC
Q 038599 268 QLDHA 272 (473)
Q Consensus 268 ~~gi~ 272 (473)
++|-+
T Consensus 182 ~~GaD 186 (201)
T cd02070 182 EIGAD 186 (201)
T ss_pred HcCCc
Confidence 88875
No 355
>PLN03013 cysteine synthase
Probab=22.76 E-value=2.9e+02 Score=29.20 Aligned_cols=66 Identities=6% Similarity=0.093 Sum_probs=45.8
Q ss_pred chHHHHHHHHhCCC-----e-EEEEcCCC-HHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCC
Q 038599 236 GALEAIKDLKSLGI-----K-SFILAGDS-HAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDG 304 (473)
Q Consensus 236 ~a~~~I~~L~~~gi-----~-v~mlTGD~-~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG 304 (473)
.+...|..+.+.|. . ++-.|+-| -.....+|+.+|+....+..+-.|++|.+.++.+ | .|..+++.
T Consensus 157 ~A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~---GAeVi~v~~~ 230 (429)
T PLN03013 157 IGYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAF---GAELVLTDPA 230 (429)
T ss_pred HHHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHc---CCEEEEECCC
Confidence 56667777777774 2 55555444 5555678899999865666677788887776655 7 78888765
No 356
>PRK04284 ornithine carbamoyltransferase; Provisional
Probab=22.59 E-value=4e+02 Score=27.03 Aligned_cols=90 Identities=16% Similarity=0.098 Sum_probs=56.7
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---hh
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---PQ 283 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P~ 283 (473)
..+-|..++++..+..-+ .-.+..+++++.|.+. ..++++-.........+|+...++ .|-+.-. |-
T Consensus 67 ~~~LGg~~i~l~~~~ss~-------~kgEsl~DTarvls~y-~D~iviR~~~~~~~~~~a~~s~vP--VINa~~~~~HPt 136 (332)
T PRK04284 67 AYDQGAHVTYLGPTGSQM-------GKKESTKDTARVLGGM-YDGIEYRGFSQRTVETLAEYSGVP--VWNGLTDEDHPT 136 (332)
T ss_pred HHHcCCeEEEcCCccccC-------CCCcCHHHHHHHHHHh-CCEEEEecCchHHHHHHHHhCCCC--EEECCCCCCChH
Confidence 345566666653322111 1246778888888888 888888888889999999999987 5544322 32
Q ss_pred ----hHHHHHHHHh--hCC-cEEEEcCCcc
Q 038599 284 ----HKEELVELLK--KDG-ATAMVGDGIN 306 (473)
Q Consensus 284 ----~K~~~v~~l~--~~g-~v~mvGDG~N 306 (473)
|-..+-+.+. -+| +++++||+.|
T Consensus 137 QaL~Dl~Ti~e~~~g~l~g~kia~vGD~~~ 166 (332)
T PRK04284 137 QVLADFLTAKEHLKKPYKDIKFTYVGDGRN 166 (332)
T ss_pred HHHHHHHHHHHHhcCCcCCcEEEEecCCCc
Confidence 2223333321 136 8999999843
No 357
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=22.45 E-value=50 Score=30.63 Aligned_cols=18 Identities=28% Similarity=0.525 Sum_probs=15.8
Q ss_pred hcCccEEEEcCCCcCCCC
Q 038599 94 LAKVKMVALDKTGTVTRG 111 (473)
Q Consensus 94 lg~vd~i~fDKTGTLT~g 111 (473)
++.++.++||-.|||+..
T Consensus 3 ~~~~~~iiFD~DGTL~d~ 20 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDS 20 (226)
T ss_pred CCcCcEEEEcCCcccccC
Confidence 467899999999999964
No 358
>PF13309 HTH_22: HTH domain
Probab=22.34 E-value=1.5e+02 Score=22.17 Aligned_cols=30 Identities=20% Similarity=0.245 Sum_probs=23.5
Q ss_pred HHHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 263 LYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 263 ~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
..+..+.|.+ ...++.++|.++|+.|.++|
T Consensus 8 ~~~~~~~~~~----~~~l~~~~k~~iV~~L~~~G 37 (64)
T PF13309_consen 8 EEVIAEVGKP----PSRLSKEEKKEIVRQLYEKG 37 (64)
T ss_pred HHHHHHhCCC----hhhCCHHHHHHHHHHHHHCC
Confidence 3455566665 46788999999999999987
No 359
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=22.27 E-value=74 Score=28.45 Aligned_cols=40 Identities=23% Similarity=0.333 Sum_probs=29.4
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCC---C-----------HHHHHHHHHHcCCCc
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGD---S-----------HAAALYAQDQLDHAF 273 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD---~-----------~~~a~~~a~~~gi~~ 273 (473)
-+++.+++++|++.|+.++|+|.- . ......+.+.+|++.
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip~ 84 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIPI 84 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS-E
T ss_pred chhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCce
Confidence 357999999999999999999832 1 133457788888874
No 360
>COG2237 Predicted membrane protein [Function unknown]
Probab=22.21 E-value=1.1e+02 Score=31.32 Aligned_cols=67 Identities=28% Similarity=0.480 Sum_probs=38.6
Q ss_pred ecCccCCch------HHHHHHHHhCC--CeEEEEcCCCH---HHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCc
Q 038599 229 LSDSCRSGA------LEAIKDLKSLG--IKSFILAGDSH---AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGA 297 (473)
Q Consensus 229 l~d~lr~~a------~~~I~~L~~~g--i~v~mlTGD~~---~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~ 297 (473)
+.||--.|+ -..-++||+.| +.+..+|||+. ..-..+++|+ ..++..+.-. .
T Consensus 39 ~AdPeDSD~Nalf~alkiydeLk~~geDveIA~vsG~~~vgv~sd~~l~~ql----------------d~vl~~~~pd-~ 101 (364)
T COG2237 39 LADPEDSDVNALFAALKIYDELKAKGEDVEIAVVSGDKDVGVESDLKLSEQL----------------DEVLSELDPD-D 101 (364)
T ss_pred cCCCccccHHHHHHHHHHHHHHhccCCceEEEEEecCCCcchhhHHHHHHHH----------------HHHHHcCCCc-E
Confidence 445554444 33446777776 56889999986 2223344333 2222222111 5
Q ss_pred EEEEcCCcccHHHHH
Q 038599 298 TAMVGDGINDAPALA 312 (473)
Q Consensus 298 v~mvGDG~ND~~al~ 312 (473)
+..|.||..|..+..
T Consensus 102 av~VsDGaeDe~ivP 116 (364)
T COG2237 102 AVVVSDGAEDERIVP 116 (364)
T ss_pred EEEeccCcccchhhh
Confidence 789999999966544
No 361
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=22.03 E-value=3.3e+02 Score=26.75 Aligned_cols=66 Identities=20% Similarity=0.201 Sum_probs=42.6
Q ss_pred chHHHHHHHHhCCC----e-EEEE-cCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCC
Q 038599 236 GALEAIKDLKSLGI----K-SFIL-AGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDG 304 (473)
Q Consensus 236 ~a~~~I~~L~~~gi----~-v~ml-TGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG 304 (473)
.+.-.+..+.+.|. . ++-. +|..-......|+++|+.-..+..+-.|+.|.+. ++..| .|..+++.
T Consensus 40 ~a~~~l~~a~~~g~~~~g~~vv~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~---~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 40 IALNMIWDAEKRGLLKPGKTIVEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKL---LKAYGAELVLTPGA 112 (298)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHH---HHHcCCEEEEECCC
Confidence 34455666776664 2 4444 4555566678889999986555666667777554 55668 78888653
No 362
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.75 E-value=1.3e+02 Score=29.83 Aligned_cols=67 Identities=21% Similarity=0.268 Sum_probs=45.2
Q ss_pred ecCccCCchHHHHHHHHhCC-Ce---EEEEcCCCHHHH------HHHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSLG-IK---SFILAGDSHAAA------LYAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~g-i~---v~mlTGD~~~~a------~~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.+|++.++.++++++.| .+ ..++-||++... ...|+++||..+.+ -.+.+.++-.+.|+.|.+.
T Consensus 11 ia~~i~~~lk~~i~~l~~~~~~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D 89 (284)
T PRK14177 11 LSEKIRNEIRETIEERKTKNKRIPKLATILVGNNPASETYVSMKVKACHKVGMGSEMIRLKEQTTTEELLGVIDKLNLD 89 (284)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 45678889999999998774 32 456678886554 46678999974432 2334566667777777654
No 363
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=21.74 E-value=3.8e+02 Score=25.28 Aligned_cols=70 Identities=23% Similarity=0.197 Sum_probs=42.1
Q ss_pred chHHHHHHHHhCC----CeEEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccH
Q 038599 236 GALEAIKDLKSLG----IKSFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDA 308 (473)
Q Consensus 236 ~a~~~I~~L~~~g----i~v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~ 308 (473)
.+...+..+++.| ..++..| |+.-......++..|+....+...-.|..|.+. ++..| .|..+++...|+
T Consensus 34 ~a~~~l~~a~~~g~~~~~~vv~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~---~~~~Ga~v~~~~~~~~~~ 109 (244)
T cd00640 34 GALNLILLAEEEGKLPKGVIIESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQ---MRALGAEVVLVPGDFDDA 109 (244)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH---HHHCCCEEEEECCCHHHH
Confidence 3445566666666 3355554 456666677888899875444444445555444 44557 788887764443
No 364
>PRK12562 ornithine carbamoyltransferase subunit F; Provisional
Probab=21.72 E-value=4.2e+02 Score=26.89 Aligned_cols=90 Identities=11% Similarity=0.079 Sum_probs=57.4
Q ss_pred HhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---hh
Q 038599 207 KCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---PQ 283 (473)
Q Consensus 207 ~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P~ 283 (473)
..+-|..++++..+..- -.-.+..+++++-|.+. ...+++-.........+|+..+++ .|-+.-. |-
T Consensus 67 ~~~LGg~~i~l~~~~s~-------~~kgEsl~Dtarvls~y-~D~iviR~~~~~~~~~~a~~~~vP--VINa~~~~~HPt 136 (334)
T PRK12562 67 AYDQGARVTYLGPSGSQ-------IGHKESIKDTARVLGRM-YDGIQYRGHGQEVVETLAEYAGVP--VWNGLTNEFHPT 136 (334)
T ss_pred HHHcCCeEEEeCCcccc-------CCCCcCHHHHHHHHHHh-CCEEEEECCchHHHHHHHHhCCCC--EEECCCCCCChH
Confidence 34566677666332211 11256778888888888 777777778888999999999987 5554322 22
Q ss_pred ----hHHHHHHHHh---hCC-cEEEEcCCcc
Q 038599 284 ----HKEELVELLK---KDG-ATAMVGDGIN 306 (473)
Q Consensus 284 ----~K~~~v~~l~---~~g-~v~mvGDG~N 306 (473)
|-..+-+.+. -+| +++++||+.|
T Consensus 137 QaLaDl~Ti~e~~g~~~l~gl~va~vGD~~~ 167 (334)
T PRK12562 137 QLLADLLTMQEHLPGKAFNEMTLVYAGDARN 167 (334)
T ss_pred HHHHHHHHHHHHhCCCCcCCcEEEEECCCCC
Confidence 3333334442 246 8999999843
No 365
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=21.69 E-value=1.3e+02 Score=23.51 Aligned_cols=22 Identities=14% Similarity=0.222 Sum_probs=15.4
Q ss_pred ccCCchHHHHHHHHhCCCeEEE
Q 038599 232 SCRSGALEAIKDLKSLGIKSFI 253 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~m 253 (473)
...+.+.+..+.|+++|+++.+
T Consensus 15 ~~~~~a~~la~~Lr~~g~~v~~ 36 (94)
T cd00861 15 VQQELAEKLYAELQAAGVDVLL 36 (94)
T ss_pred HHHHHHHHHHHHHHHCCCEEEE
Confidence 4455666777778888887766
No 366
>PLN02363 phosphoribosylanthranilate isomerase
Probab=21.67 E-value=3.9e+02 Score=25.98 Aligned_cols=70 Identities=23% Similarity=0.174 Sum_probs=49.3
Q ss_pred CCeEEEEEEecCccCCchHHHHHH----HHhCCCe-EEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHh
Q 038599 220 GATPVGTFSLSDSCRSGALEAIKD----LKSLGIK-SFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLK 293 (473)
Q Consensus 220 d~~~lG~i~l~d~lr~~a~~~I~~----L~~~gi~-v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~ 293 (473)
+-.++|++...+..|.=..+..++ ++..+++ |.+...++......++++++++.-++|+..+|+. ++.|+
T Consensus 67 GaD~iGfIf~~~SpR~Vs~e~a~~I~~~l~~~~~~~VgVfv~~~~~~I~~~~~~~~ld~VQLHG~e~~~~----~~~l~ 141 (256)
T PLN02363 67 GADFIGMILWPKSKRSISLSVAKEISQVAREGGAKPVGVFVDDDANTILRAADSSDLELVQLHGNGSRAA----FSRLV 141 (256)
T ss_pred CCCEEEEecCCCCCCcCCHHHHHHHHHhccccCccEEEEEeCCCHHHHHHHHHhcCCCEEEECCCCCHHH----HHHhh
Confidence 346789987788877544444443 4333554 8888899999999999999998667888776654 44454
No 367
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=21.28 E-value=2.9e+02 Score=25.49 Aligned_cols=62 Identities=16% Similarity=0.131 Sum_probs=41.6
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCH-----HHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEE
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSH-----AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAM 300 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~-----~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~m 300 (473)
.+..+.++++++.|+. .+++||+. .-.+.+++++|+..-....+.+ -..+++.+-..| .+..
T Consensus 75 ~~l~~~l~~~~~~g~~-~vv~G~i~sd~~~~~~e~~~~~~gl~~~~PLW~~~---~~~ll~e~~~~g~~~~i 142 (194)
T cd01994 75 EDLKELLRKLKEEGVD-AVVFGAILSEYQRTRVERVCERLGLEPLAPLWGRD---QEELLREMIEAGFKAII 142 (194)
T ss_pred HHHHHHHHHHHHcCCC-EEEECccccHHHHHHHHHHHHHcCCEEEecccCCC---HHHHHHHHHHcCCeEEE
Confidence 5566777777777665 57799985 4556899999996332333333 345888888888 5433
No 368
>PRK14805 ornithine carbamoyltransferase; Provisional
Probab=21.19 E-value=5.3e+02 Score=25.70 Aligned_cols=91 Identities=18% Similarity=0.078 Sum_probs=55.1
Q ss_pred HHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccC---h
Q 038599 206 AKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELL---P 282 (473)
Q Consensus 206 ~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~---P 282 (473)
...+-|..++++..+.. .-.-.+..+++++.|.+. ..++++-.........+++..+++ .|-+.-. |
T Consensus 59 A~~~LGg~~i~l~~~~s-------s~~kgEsl~Dt~~vls~y-~D~iviR~~~~~~~~~~a~~~~vP--VINa~~~~~HP 128 (302)
T PRK14805 59 GINKLGGHCLYLDQQNG-------ALGKRESVADFAANLSCW-ADAIVARVFSHSTIEQLAEHGSVP--VINALCDLYHP 128 (302)
T ss_pred HHHHcCCcEEECCCCcC-------cCCCCcCHHHHHHHHHHh-CCEEEEeCCChhHHHHHHHhCCCC--EEECCCCCCCh
Confidence 34455666666543211 112256677888888777 777777777778888889888887 5544332 2
Q ss_pred h----hHHHHHHHHhh-CC-cEEEEcCCcc
Q 038599 283 Q----HKEELVELLKK-DG-ATAMVGDGIN 306 (473)
Q Consensus 283 ~----~K~~~v~~l~~-~g-~v~mvGDG~N 306 (473)
- |-..+-+.+.. +| +|+++||+.|
T Consensus 129 tQaL~Dl~Ti~e~~g~l~g~kva~vGD~~~ 158 (302)
T PRK14805 129 CQALADFLTLAEQFGDVSKVKLAYVGDGNN 158 (302)
T ss_pred HHHHHHHHHHHHHhCCcCCcEEEEEcCCCc
Confidence 2 22222222221 25 8999999866
No 369
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=21.11 E-value=2.6e+02 Score=27.84 Aligned_cols=70 Identities=16% Similarity=0.126 Sum_probs=45.1
Q ss_pred hHHHHHHHHhCCCe-EEEE-cCCCHHHHHHHHHHcCCCccceehcc-ChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 237 ALEAIKDLKSLGIK-SFIL-AGDSHAAALYAQDQLDHAFDMVYAEL-LPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 237 a~~~I~~L~~~gi~-v~ml-TGD~~~~a~~~a~~~gi~~~~v~a~~-~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
+...+..+++.|.. ++.. ||+.-..+...|+..|+.-..+..+- .+..|...++ ..| .|..++.+..|+.
T Consensus 59 a~~~l~~a~~~g~~~vv~aSsGN~g~a~A~~a~~~g~~~~v~~p~~~~s~~k~~~~~---~~GA~Vi~~~~~~~~~~ 132 (328)
T TIGR00260 59 MAVALTKALELGNDTVLCASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLAQAL---GYNAEVVAIDGNFDDAQ 132 (328)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHhccCCCcEEEEECCCCCCHHHHHHHH---hcCcEEEEecCCHHHHH
Confidence 66778777777765 3333 45555555678899999754444443 4556655554 467 8888876666654
No 370
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=21.07 E-value=1.9e+02 Score=29.64 Aligned_cols=69 Identities=19% Similarity=0.177 Sum_probs=44.2
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCCcEEEEcCCcccHHHHHHC
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDGATAMVGDGINDAPALAAV 314 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~al~~A 314 (473)
.|.+++|+.-++.|.+++++--|-.-|-+ ..+.++++.+|.+++-.|-.. +.+-|++.-|..-+++.
T Consensus 99 sEmk~AIe~A~e~ga~V~lIDRdI~vTl~-----------R~~~~~~~~EKlK~~~~L~~~--~~~~g~~e~ei~~l~~~ 165 (388)
T COG1916 99 SEMKAAIEAARELGAPVALIDRDIGVTLR-----------RAWAKMPFWEKLKLISSLISG--LLFPGQSEIEIDELKQE 165 (388)
T ss_pred HHHHHHHHHHHHcCCCEEEecccHHHHHH-----------HHHHhCCHHHHHHHHHHHHHh--cccCCCchHHHHHHhhh
Confidence 35566777777777777766544444332 446667788898888777543 44555566667777777
Q ss_pred Ce
Q 038599 315 DI 316 (473)
Q Consensus 315 dv 316 (473)
|+
T Consensus 166 D~ 167 (388)
T COG1916 166 DV 167 (388)
T ss_pred hH
Confidence 66
No 371
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=21.02 E-value=3.4e+02 Score=26.12 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=31.6
Q ss_pred CchHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCc
Q 038599 235 SGALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAF 273 (473)
Q Consensus 235 ~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~ 273 (473)
...+++|++|+++||+|-+.= |+.......|+++|-+.
T Consensus 110 ~~l~~~i~~l~~~gI~VSLFi-DP~~~qi~~A~~~GAd~ 147 (237)
T TIGR00559 110 DKLCELVKRFHAAGIEVSLFI-DADKDQISAAAEVGADR 147 (237)
T ss_pred HHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 456789999999999988764 67777888999999874
No 372
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=20.92 E-value=73 Score=26.79 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=24.0
Q ss_pred CCchHHHHHHHHhCCCeEEEEcCCCHHH
Q 038599 234 RSGALEAIKDLKSLGIKSFILAGDSHAA 261 (473)
Q Consensus 234 r~~a~~~I~~L~~~gi~v~mlTGD~~~~ 261 (473)
-++..++++.+|+.|.+++.+|+.....
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 60 TKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred ChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 4688899999999999999999876544
No 373
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=20.89 E-value=1.5e+02 Score=29.84 Aligned_cols=82 Identities=15% Similarity=0.248 Sum_probs=48.9
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHHHH-HHcCCCc---------------------cceehccChhhHH
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAGDSHAAALYAQ-DQLDHAF---------------------DMVYAELLPQHKE 286 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a-~~~gi~~---------------------~~v~a~~~P~~K~ 286 (473)
+.|.+|. .+.|+++|+.|.++.+++--.-..+...+ ..-|++- -++.+++-|++..
T Consensus 161 vLdRpRH--~~lI~eir~~Gari~Li~DGDV~~ai~~~~~~~~vD~~~GiGGaPEGVlaAaAlkclGG~~q~rL~~~~~~ 238 (322)
T PRK12415 161 VQERERH--QDIIDRVRAKGARVKLFGDGDVGASIATALPGTGIDLFVGIGGAPEGVISAAALKCLGGEMQARLVPMNEE 238 (322)
T ss_pred EEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhCCCCCeeEEEEcCCChHHHHHHHHHHhCCceeEEEECCCCHH
Confidence 4465555 58999999999999999833333333322 1122221 0667777665443
Q ss_pred HHHHHHh---------------hCC-cEEEEcCCcccHHHHH
Q 038599 287 ELVELLK---------------KDG-ATAMVGDGINDAPALA 312 (473)
Q Consensus 287 ~~v~~l~---------------~~g-~v~mvGDG~ND~~al~ 312 (473)
+.-+..+ -.| .|.|+.-|+.|-.-|+
T Consensus 239 e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~ 280 (322)
T PRK12415 239 EEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLD 280 (322)
T ss_pred HHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcC
Confidence 3333222 114 7888888898877666
No 374
>TIGR00330 glpX fructose-1,6-bisphosphatase, class II. In E. coli, GlpX is found in the glpFKX operon together with a glycerol update protein and glycerol kinase.
Probab=20.87 E-value=76 Score=31.68 Aligned_cols=26 Identities=19% Similarity=0.432 Sum_probs=20.8
Q ss_pred ecCccCCchHHHHHHHHhCCCeEEEEcC
Q 038599 229 LSDSCRSGALEAIKDLKSLGIKSFILAG 256 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~gi~v~mlTG 256 (473)
+.|.+|. .+.|+++|+.|.++.+++-
T Consensus 160 vLdRpRH--~~lI~eiR~~Gari~Li~D 185 (321)
T TIGR00330 160 ILAKPRH--DAVIAEMQQLGVRVFAIPD 185 (321)
T ss_pred EEcCchH--HHHHHHHHHcCCeEEEecc
Confidence 4455555 5899999999999999983
No 375
>PLN03142 Probable chromatin-remodeling complex ATPase chain; Provisional
Probab=20.85 E-value=3.2e+02 Score=32.32 Aligned_cols=57 Identities=9% Similarity=0.049 Sum_probs=41.1
Q ss_pred HHHHHHHhCCCeEEEEcCCCHHHHH---HHHHHcCCCccceehccChhhHHHHHHHHhhCC
Q 038599 239 EAIKDLKSLGIKSFILAGDSHAAAL---YAQDQLDHAFDMVYAELLPQHKEELVELLKKDG 296 (473)
Q Consensus 239 ~~I~~L~~~gi~v~mlTGD~~~~a~---~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g 296 (473)
+.+..+++.|.+|++.|- ...+.. ......|+....+.+.++++++..+|+.+++.+
T Consensus 478 kLL~~Lk~~g~KVLIFSQ-ft~~LdiLed~L~~~g~~y~rIdGsts~~eRq~~Id~Fn~~~ 537 (1033)
T PLN03142 478 KLLPKLKERDSRVLIFSQ-MTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIDAFNKPG 537 (1033)
T ss_pred HHHHHHHhcCCeEEeehh-HHHHHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHhcccc
Confidence 456778889999999984 222222 333445666557788999999999999998753
No 376
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=20.83 E-value=5.5e+02 Score=24.49 Aligned_cols=80 Identities=23% Similarity=0.297 Sum_probs=51.0
Q ss_pred hHHHHHHHHhCCCeEEEEcC-CCH----HHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEE-------cC
Q 038599 237 ALEAIKDLKSLGIKSFILAG-DSH----AAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMV-------GD 303 (473)
Q Consensus 237 a~~~I~~L~~~gi~v~mlTG-D~~----~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mv-------GD 303 (473)
.++.++..++.|+.+.+=.+ +.. ...... .++|... ..|+....+ +.++.+++.| .+..+ |.
T Consensus 127 l~~~~~~A~~~g~~v~~H~~e~~~~~g~~~i~~~-~~~~~~~-i~H~~~l~~---~~~~~la~~g~~v~~~P~sn~~l~~ 201 (263)
T cd01305 127 LEDILELLRRRGKLFAIHASETRESVGMTDIERA-LDLEPDL-LVHGTHLTD---EDLELVRENGVPVVLCPRSNLYFGV 201 (263)
T ss_pred HHHHHHHHHHCCCeeEEecCCCCCCCCchhHHHH-HhCCCCE-EEEcCCCCH---HHHHHHHHcCCcEEEChhhHHHhCC
Confidence 78888888999987655332 221 123333 3345431 234333332 2377788888 55554 88
Q ss_pred CcccHHHHHHCCeeEEeC
Q 038599 304 GINDAPALAAVDIGISMG 321 (473)
Q Consensus 304 G~ND~~al~~AdvgIa~g 321 (473)
|......+.+++|-+++|
T Consensus 202 g~~p~~~l~~~Gv~v~lG 219 (263)
T cd01305 202 GIPPVAELLKLGIKVLLG 219 (263)
T ss_pred CCCCHHHHHHCCCcEEEE
Confidence 999999999999999997
No 377
>COG0415 PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair]
Probab=20.71 E-value=2.6e+02 Score=29.72 Aligned_cols=59 Identities=20% Similarity=0.233 Sum_probs=42.8
Q ss_pred chHHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHcCCCccceehcc--ChhhHHH---HHHHHhhCC
Q 038599 236 GALEAIKDLKSLGIKSFILAGDSHAAALYAQDQLDHAFDMVYAEL--LPQHKEE---LVELLKKDG 296 (473)
Q Consensus 236 ~a~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~gi~~~~v~a~~--~P~~K~~---~v~~l~~~g 296 (473)
..++.=+.|++.|++.++.+||.......+++++++. .|+.+. ++.++.+ +-+.|.+.|
T Consensus 56 sL~~L~~~L~~~gi~L~v~~~~~~~~l~~~~~~~~~~--~v~~n~~~~~~~~~rD~al~~~l~~~g 119 (461)
T COG0415 56 SLQALQQSLAELGIPLLVREGDPEQVLPELAKQLAAT--TVFWNRDYEEWERQRDAALAQPLTEVG 119 (461)
T ss_pred HHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhCcc--eEEeeeeechhHHHHHHHHHHHHHhcC
Confidence 3445556788899999999999999999999999977 555443 3433332 444566666
No 378
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=20.69 E-value=3.9e+02 Score=24.03 Aligned_cols=69 Identities=20% Similarity=0.281 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHHHHHHHc-----CCCccc-eehccChhhHHHHHHHHhhCC-cEEEEcCCccc
Q 038599 238 LEAIKDLKSLGIKSFILAGDSHAAALYAQDQL-----DHAFDM-VYAELLPQHKEELVELLKKDG-ATAMVGDGIND 307 (473)
Q Consensus 238 ~~~I~~L~~~gi~v~mlTGD~~~~a~~~a~~~-----gi~~~~-v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND 307 (473)
.+.++.+.+.+.++.++ |..+..+...++.+ |+.... ...-..+++-.++++.+++.+ .+.++|=|.--
T Consensus 36 ~~ll~~~~~~~~~v~ll-G~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~Pk 111 (171)
T cd06533 36 PALLELAAQKGLRVFLL-GAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVGLGAPK 111 (171)
T ss_pred HHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCH
Confidence 46667777778888888 55555555443322 221001 122234555556888888888 78888877543
No 379
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=20.68 E-value=2.4e+02 Score=30.41 Aligned_cols=56 Identities=18% Similarity=0.286 Sum_probs=39.7
Q ss_pred EEEEc-CCCHHHHHHHHHHcCCCccceehccChhhHHHHHHHHhhCC-cEEEEcCCcccHH
Q 038599 251 SFILA-GDSHAAALYAQDQLDHAFDMVYAELLPQHKEELVELLKKDG-ATAMVGDGINDAP 309 (473)
Q Consensus 251 v~mlT-GD~~~~a~~~a~~~gi~~~~v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~ 309 (473)
++..| |.+-......|+++|+....+..+-+|..|.+. ++..| .|..+|+...|+.
T Consensus 68 VV~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~---~r~~GA~Vvl~g~~~d~a~ 125 (499)
T TIGR01124 68 VIAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDA---VRGFGGEVVLHGANFDDAK 125 (499)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH---HHhCCCEEEEeCcCHHHHH
Confidence 44444 555566678889999986666777788888665 45557 8888898776553
No 380
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=20.63 E-value=1.4e+02 Score=29.90 Aligned_cols=67 Identities=15% Similarity=0.129 Sum_probs=46.7
Q ss_pred ecCccCCchHHHHHHHHhC-CCe---EEEEcCCCHHHHH------HHHHHcCCCccce--ehccChhhHHHHHHHHhhC
Q 038599 229 LSDSCRSGALEAIKDLKSL-GIK---SFILAGDSHAAAL------YAQDQLDHAFDMV--YAELLPQHKEELVELLKKD 295 (473)
Q Consensus 229 l~d~lr~~a~~~I~~L~~~-gi~---v~mlTGD~~~~a~------~~a~~~gi~~~~v--~a~~~P~~K~~~v~~l~~~ 295 (473)
+.+.++++.++-++.|++. |++ .++.-||++.... ..|+++||....+ -.+.++++-.+.|+.|.+.
T Consensus 17 vA~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~D 95 (299)
T PLN02516 17 IAKAIRSEIAEEVAQLSEKHGKVPGLAVVIVGSRKDSQTYVNMKRKACAEVGIKSFDVDLPENISEAELISKVHELNAN 95 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEEECCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCC
Confidence 4567788888999999876 775 3455687765544 5578999974322 2455677778888888765
No 381
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=20.56 E-value=4.1e+02 Score=23.85 Aligned_cols=116 Identities=9% Similarity=0.148 Sum_probs=64.2
Q ss_pred HHHHHHHHhCCCeEEEEcCCCHHHHH----HHHHHc-CCCccc-eehccChhhHHHHHHHHhhCC-cEEEEcCCcccHHH
Q 038599 238 LEAIKDLKSLGIKSFILAGDSHAAAL----YAQDQL-DHAFDM-VYAELLPQHKEELVELLKKDG-ATAMVGDGINDAPA 310 (473)
Q Consensus 238 ~~~I~~L~~~gi~v~mlTGD~~~~a~----~~a~~~-gi~~~~-v~a~~~P~~K~~~v~~l~~~g-~v~mvGDG~ND~~a 310 (473)
.+.++.+.+.|.+++++-|+.. .+. .+.++. |+.... .....++++-.++++.+++.+ .+.++|=|.---+.
T Consensus 38 ~~l~~~~~~~~~~ifllG~~~~-~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~ 116 (172)
T PF03808_consen 38 PDLLRRAEQRGKRIFLLGGSEE-VLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLGAPKQER 116 (172)
T ss_pred HHHHHHHHHcCCeEEEEeCCHH-HHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCCHHHH
Confidence 4566777778888888876654 333 333333 332111 112236788899999999988 89999988764332
Q ss_pred HH-------HCCeeEEeCCCCCccc---cccccEEEecCCcccHHHHHHHHHHHH
Q 038599 311 LA-------AVDIGISMGISGSALA---MESGHVILMSNDIRKIPKAIKLARKAS 355 (473)
Q Consensus 311 l~-------~AdvgIa~g~~~~~~a---~~~ad~vl~~~~l~~l~~~i~~~r~~~ 355 (473)
.- .+.+.+++| ..-+.. ..-|.-.+..-++..+..++++-|+.+
T Consensus 117 ~~~~~~~~l~~~v~i~vG-~~~d~~aG~~~raP~w~~~~glEWlyRl~~eP~Rl~ 170 (172)
T PF03808_consen 117 WIARHRQRLPAGVIIGVG-GAFDFLAGKVKRAPKWMRRLGLEWLYRLLQEPKRLW 170 (172)
T ss_pred HHHHHHHHCCCCEEEEEC-chhhhhccCcCccCHHHHHcCcHHHHHHHhChHhhh
Confidence 22 234666665 221211 122223333344556666666555544
No 382
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=20.43 E-value=4e+02 Score=24.59 Aligned_cols=37 Identities=14% Similarity=0.289 Sum_probs=29.4
Q ss_pred HHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 038599 347 AIKLARKAS----------TKLIQNVTLSVTVKGAVLVLAVAGYPLV 383 (473)
Q Consensus 347 ~i~~~r~~~----------~~i~~n~~~~~~~n~~~~~la~~g~~~~ 383 (473)
..++||+.. ..+.+.+...+..|++++.+++.|.+..
T Consensus 79 y~Rlar~L~~~~~~~~P~k~~~~~~l~~Gl~~nl~Gmllt~lG~~a~ 125 (183)
T PF12263_consen 79 YTRLARRLRSPNPAKRPSKADVVRLLRIGLIINLVGMLLTLLGAQAT 125 (183)
T ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777775 4577899999999999999999886543
No 383
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=20.27 E-value=1.5e+02 Score=24.66 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=25.3
Q ss_pred ccCCchHHHHHHHHhCCCeEEEEcCCCHHHHHH
Q 038599 232 SCRSGALEAIKDLKSLGIKSFILAGDSHAAALY 264 (473)
Q Consensus 232 ~lr~~a~~~I~~L~~~gi~v~mlTGD~~~~a~~ 264 (473)
.-.++..+.++.+|+.|.+++.+|+........
T Consensus 64 g~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~ 96 (131)
T PF01380_consen 64 GETRELIELLRFAKERGAPVILITSNSESPLAR 96 (131)
T ss_dssp STTHHHHHHHHHHHHTTSEEEEEESSTTSHHHH
T ss_pred ccchhhhhhhHHHHhcCCeEEEEeCCCCCchhh
Confidence 345678889999999999999999766544433
No 384
>PF02219 MTHFR: Methylenetetrahydrofolate reductase; InterPro: IPR003171 This family includes the 5,10-methylenetetrahydrofolate reductase 1.7.99.5 from EC from bacteria and methylenetetrahydrofolate reductase 1.5.1.20 from EC from eukaryotes. The structure for this domain is known [] to be a TIM barrel.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process, 0055114 oxidation-reduction process; PDB: 3IJD_B 1B5T_B 3FSU_C 1ZPT_C 2FMO_B 3FST_C 2FMN_C 1ZP3_A 1ZP4_B 1ZRQ_B ....
Probab=20.26 E-value=1.2e+02 Score=29.97 Aligned_cols=40 Identities=23% Similarity=0.410 Sum_probs=29.4
Q ss_pred eEEEEEEecCccCCchHHHHHHHHhCCCe-EEEEcCCCHHH
Q 038599 222 TPVGTFSLSDSCRSGALEAIKDLKSLGIK-SFILAGDSHAA 261 (473)
Q Consensus 222 ~~lG~i~l~d~lr~~a~~~I~~L~~~gi~-v~mlTGD~~~~ 261 (473)
..+--+.-.|.-|.+...-+..+++.|++ +..+|||....
T Consensus 72 ~~i~Hlt~rd~n~~~l~~~L~~~~~~Gi~niL~l~GD~~~~ 112 (287)
T PF02219_consen 72 EPIPHLTCRDRNREALQSDLLGAHALGIRNILALTGDPPKG 112 (287)
T ss_dssp -EEEEEESTTSBHHHHHHHHHHHHHTT--EEEEESS-TSTT
T ss_pred ceEEeecccCCCHHHHHHHHHHHHHcCCCeEEEecCCCCCC
Confidence 44556677888788889999999999997 88999998643
No 385
>TIGR03489 cas_csp1 CRISPR-associated protein, Csp1 family. Members of this protein family are Csp1, a CRISPR-associated (cas) gene marker for the Pging subtype of CRISPR/cas system, as found in Porphyromonas gingivalis W83 and Bacteroides forsythus ATCC 43037. This protein belongs to the family of DevR (TIGR01875), a regulator of development in Myxococcus xanthus located in a cas gene region. A different branch of the DevR family, Cst2 (TIGR02585), is a marker for the Tneap subtype of CRISPR/cas system.
Probab=20.23 E-value=1.3e+02 Score=29.34 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=25.7
Q ss_pred cChhhHHHHHHHHhhCCcEEEEcCCcccHH
Q 038599 280 LLPQHKEELVELLKKDGATAMVGDGINDAP 309 (473)
Q Consensus 280 ~~P~~K~~~v~~l~~~g~v~mvGDG~ND~~ 309 (473)
....+|..|+..|.+.|..+++||...|-.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (292)
T TIGR03489 230 ADEKEKANIIAELDERGAKCFIGDDASDKS 259 (292)
T ss_pred cchHHHhhHHHHHHhhCCeEEecCCcchhh
Confidence 346789999999999999999999988743
No 386
>TIGR03822 AblA_like_2 lysine-2,3-aminomutase-related protein. Members of this protein form a distinctive clade, homologous to lysine-2,3-aminomutase (of Bacillus, Clostridium, and methanogenic archaea) and likely similar in function. Members of this family are found in Rhodopseudomonas, Caulobacter crescentus, Bradyrhizobium, etc.
Probab=20.08 E-value=6.8e+02 Score=25.05 Aligned_cols=85 Identities=24% Similarity=0.132 Sum_probs=51.6
Q ss_pred HHHHhcCCceeeEeeeCCeEEEEEEecCccCCchHHHHHHHHhCCCeEE---EEcC---CCHHHHH---HHHHHcCCCcc
Q 038599 204 AEAKCTGGKTRGYVYLGATPVGTFSLSDSCRSGALEAIKDLKSLGIKSF---ILAG---DSHAAAL---YAQDQLDHAFD 274 (473)
Q Consensus 204 ~~~~~~~G~~vi~va~d~~~lG~i~l~d~lr~~a~~~I~~L~~~gi~v~---mlTG---D~~~~a~---~~a~~~gi~~~ 274 (473)
++.+.+.|.. +++..+..- ...+.+++.++++.|++.|+.+. ++.. |+..+-. ..+.++|+..-
T Consensus 190 l~~L~~~g~~-v~i~l~~~h------~~el~~~~~~ai~~L~~~Gi~v~~q~vLl~gvNd~~~~l~~l~~~l~~~gv~py 262 (321)
T TIGR03822 190 IAALKTSGKT-VYVALHANH------ARELTAEARAACARLIDAGIPMVSQSVLLRGVNDDPETLAALMRAFVECRIKPY 262 (321)
T ss_pred HHHHHHcCCc-EEEEecCCC------hhhcCHHHHHHHHHHHHcCCEEEEEeeEeCCCCCCHHHHHHHHHHHHhcCCeeE
Confidence 4556666644 345444321 12346899999999999999863 3444 6654443 44556787532
Q ss_pred ----------ceehccChhhHHHHHHHHhhC
Q 038599 275 ----------MVYAELLPQHKEELVELLKKD 295 (473)
Q Consensus 275 ----------~v~a~~~P~~K~~~v~~l~~~ 295 (473)
.-+.+.++++-.++++.++..
T Consensus 263 yl~~~~p~~g~~~f~~~~~~~~~i~~~l~~~ 293 (321)
T TIGR03822 263 YLHHLDLAPGTAHFRVTIEEGQALVRALRGR 293 (321)
T ss_pred EEEecCCCCCcccccCcHHHHHHHHHHHHHh
Confidence 112345667777888888765
No 387
>PLN02954 phosphoserine phosphatase
Probab=20.03 E-value=74 Score=29.58 Aligned_cols=24 Identities=29% Similarity=0.340 Sum_probs=21.4
Q ss_pred chHhhhhcCccEEEEcCCCcCCCC
Q 038599 88 GDYLEILAKVKMVALDKTGTVTRG 111 (473)
Q Consensus 88 ~~~lE~lg~vd~i~fDKTGTLT~g 111 (473)
.+.+|-...++.++||=-||||..
T Consensus 3 ~~~~~~~~~~k~viFDfDGTL~~~ 26 (224)
T PLN02954 3 KDVLELWRSADAVCFDVDSTVCVD 26 (224)
T ss_pred HHHHHHHccCCEEEEeCCCcccch
Confidence 467888899999999999999985
Done!