Query 038600
Match_columns 658
No_of_seqs 234 out of 1155
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 12:40:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038600.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038600hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02283 alpha-dioxygenase 100.0 2E-164 4E-169 1386.4 47.7 628 7-658 2-633 (633)
2 KOG2408 Peroxidase/oxygenase [ 100.0 1E-117 2E-122 1017.5 33.4 589 9-655 60-712 (719)
3 PF03098 An_peroxidase: Animal 100.0 2E-115 5E-120 986.1 20.7 492 90-637 1-530 (530)
4 KOG1712 Adenine phosphoribosyl 38.7 8.9 0.00019 37.2 -0.4 51 511-576 26-84 (183)
5 PLN00107 FAD-dependent oxidore 38.5 15 0.00033 38.3 1.2 46 282-332 160-205 (257)
6 PF10929 DUF2811: Protein of u 27.0 52 0.0011 26.4 2.2 16 294-309 18-33 (57)
7 TIGR01677 pln_FAD_oxido plant- 26.2 33 0.00071 40.0 1.4 59 269-332 443-511 (557)
8 PLN02465 L-galactono-1,4-lacto 25.8 31 0.00068 40.2 1.1 45 282-332 520-572 (573)
9 PF08880 QLQ: QLQ; InterPro: 11.7 1.5E+02 0.0033 21.6 1.5 26 599-624 1-26 (37)
10 PF02845 CUE: CUE domain; Int 11.3 1.9E+02 0.0042 21.1 2.0 20 288-307 3-22 (42)
No 1
>PLN02283 alpha-dioxygenase
Probab=100.00 E-value=1.7e-164 Score=1386.39 Aligned_cols=628 Identities=69% Similarity=1.153 Sum_probs=580.9
Q ss_pred HHHhhhhcccccchHHHHhhhhhhhHHHhhhhhcccccCCCccCChhhHHHhHHhhHHHHHHccccccCCCCCCCCCCCC
Q 038600 7 LLTAALLHYIHKDFHEAAARMTLIDCFLFLIVHSIDKLGIWPRLPVFVGLFYLGIRQHLHQEYNLFNVGISPVGVRFNPA 86 (658)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~lp~~~gl~~l~~~r~~~~~~nL~d~~~~~~~~~~~~~ 86 (658)
++|+++.+|||||||++|++|++++++++.++|.+||+++|||||+++|+++|+.+|++||+|||||++..+....+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~p~~~~~~~l~~~r~~~~~~nl~~~~~~~~~~~~~~~ 81 (633)
T PLN02283 2 LFSASLSWFIHPDLHEVVSKMSLFDRFLFLIVHFVDKLGLWHRLPVFLGLAYLALRRHLHQRYNLLNVGQTPNGQRYDPA 81 (633)
T ss_pred ccccccchhccHHHHHHHhhccHHHHHHHHHHHHHhhcCchhhccHHHHHHHHHHHHHHHHhhccccccCCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988888889888
Q ss_pred CCcccCCCCCCcCcCCCCCCCCCCCcc--cCcc-cccccccCCCCCCCCChHHHHHHHhhccCccCCCCchhHHHHHHHH
Q 038600 87 DYPYRRADGKYNDPFNYTRNKFNSTFN--IGKT-QKKKKKKAGNVLMKPDPMVVATKLLARRNYKDTGKQFNMIAASWIQ 163 (658)
Q Consensus 87 ~~~yRt~DGscNNl~~P~~G~a~t~f~--lpp~-y~Dg~~~s~~~~~lP~pR~VS~~l~~~~~~~~~~~~~n~l~~~wgQ 163 (658)
.++|||+||+|||+.||.||+||++|+ +||. |.|| ..+|+||+||++|++++.+++++.++|+|+++|||
T Consensus 82 ~~~yRt~DGscNNl~~P~~G~agt~f~R~v~p~~~~~~-------~~~P~pr~vs~~ll~r~~f~~~~~~~n~~~~~w~Q 154 (633)
T PLN02283 82 EYPYRTADGKCNDPFNEGAGSQGTFFGRNMPPVDQKDK-------LLDPHPSVVATKLLARKKFIDTGKQFNMIAASWIQ 154 (633)
T ss_pred cccccCCCCCCcCCCCcccccCCCccccCCCccccCCC-------CCCCCHHHHHHHHHhhccccCCCCcchHHHHHHHH
Confidence 999999999999999999999999999 8885 5554 55799999999999999998778899999999999
Q ss_pred HHHhhhccccCCCCccceeCCCCCCCCCCCcccccccccCCCCCCCCCCcccccCCCCccCCccCCCCCHHHhhhhccCC
Q 038600 164 FMIHDWVDHLEDTNQVELIAPNEVADKCPLSSFKFFKTKEVPTGFYEMKTGTINTRTPWWDGSALYGSTMARLQKVRTFK 243 (658)
Q Consensus 164 Fi~HD~~~~~~~~~~~~i~iP~~~~~~~p~~~m~~~Rs~~~~~~~~~~~~~q~N~~Ts~lD~S~IYGst~~~~~~LR~~~ 243 (658)
||+|||++|.+++.+.+|.+|.+.++.||.+||+|+||.+++++.++++++|+|++|||||||+||||+++++++||+|+
T Consensus 155 f~~HD~~~~~~~~~~~~i~~p~~~~~~~~~~~~~f~RT~~~~~~~~~~~~~qiN~~Ts~lD~S~IYGss~~~~~~LRtf~ 234 (633)
T PLN02283 155 FMIHDWIDHLEDTQQIELTAPKEVASQCPLKSFKFYKTKEVPTGSPDIKTGSLNIRTPWWDGSVIYGSNEKGLRRVRTFK 234 (633)
T ss_pred HHHhhhhhhcCccccccccCCcccccCCcccccccccCCCCCCCCCCCCccccccccceeecccccCCCHHHHHhhhCCC
Confidence 99999999988877788999988899999999999999988876666678999999999999999999999999999999
Q ss_pred CCeeeeccCCCcccCCCCCcccCCCCCcchhHHHHHHHHHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHHHHhhheeeee
Q 038600 244 DGKLKISEDGLLLHDQDGIAVTGDVRNSWAGVSLLEALFIKEHNSVCEAIKEENPHLSDEELYRFGRLVTSAVIAKVHTI 323 (658)
Q Consensus 244 ~GkLk~~~~g~LP~~~~~~~~aGD~RN~~pgL~~lhtlf~ReHNria~~L~~~nP~W~DE~LfqeAR~IviA~~Q~I~y~ 323 (658)
+||||++.+|++|.+..+|+++||.||+||||++|||||+|||||||++|+++||+|+||+||||||+||||+||||||+
T Consensus 235 ~GkLk~~~~~~l~~~~~~~~~~Gd~rn~~pGL~~lhtLF~REHNrIad~L~~~nP~w~DE~LFQeAR~Iv~A~~q~I~~~ 314 (633)
T PLN02283 235 DGKLKISEDGLLLHDEDGIPISGDVRNSWAGVSLLQALFVKEHNAVCDALKEEYPDFDDEELYRHARLVTSAVIAKIHTI 314 (633)
T ss_pred CCccCcCCCCCCCCCccCCcccCccccccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHheeeeee
Confidence 99999988899998888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhcccccccccccccccccccccccccCCCCccccCCCCCCCCCCCCCCCCccchhhHhhhhhcccCccccccCC
Q 038600 324 DWTVELLKTDTLDAGMHANWYGLLGKKFKDTFGHVGGAILGGFVGMKRPEIHGVPYSLTEEFVDVYRMHSLLPDQLHLRD 403 (658)
Q Consensus 324 E~LP~lLG~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~g~~~~~~~~v~~sis~EFaaayRfHslip~~~~~~d 403 (658)
||||+|||.+++.++|++||+|++|+++++.+|+...+.++||+||+.+++++++++|++||++||||||+||+.+.+++
T Consensus 315 EylP~iLg~~~~~~~~~~~w~gllg~~~~~~~g~~~~~~~~g~~gy~~~~~~~v~~~is~EF~aaYR~Hslip~~~~~~~ 394 (633)
T PLN02283 315 DWTVELLKTDTLLAGMRANWYGLLGKKFKDTFGHIGGPILSGLVGLKKPNNHGVPYSLTEEFTSVYRMHSLLPDHLILRD 394 (633)
T ss_pred eccHHhcCCcccccccccccccccchhhhhhcccccccccccccCCCccccCCCCcchhHHHHHHHhhhhcCCCceeccc
Confidence 99999999999999999999999999999999998766789999988888999999999999999999999999999877
Q ss_pred CCCCCCCCCCCCcccccchhHHhcccccccccccchHHHHHHhhhccccccccccccHHhhhhhccccCCCCCCCchhHH
Q 038600 404 LTVPPGPNKSPRLAEKVDMANLIGLKGERTLSEIGFTRQMVSMGHQACGALVLWNYPRWLRNHVVQDMEGKERPDPVDLA 483 (658)
Q Consensus 404 ~~~~~~~~~~~~l~~~~~l~d~~~~~~~~~~~~~g~~~~l~g~~~q~~~~~~~~n~~~~lr~~~~~~~~G~~~~~~~DL~ 483 (658)
........+++++.+++++.|+++..+...+.+.|++++++||+.|++|+++++|+|.+|++++.+..+|..++.++||+
T Consensus 395 ~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~l~~~Gl~~ll~~l~~q~aga~~l~n~p~~l~~l~~~~~~g~~~~~g~DLa 474 (633)
T PLN02283 395 ITAAPGENKSPPLIEEIPMPELIGLKGEKKLSKIGFEKLMVSMGHQACGALELWNYPSWMRDLVPQDIDGEDRPDHVDMA 474 (633)
T ss_pred ccccccccccccccccccHHHHHhhcccccccccCHHHHHHHHhhcchhccccccCcHHHHhhhhccccCCcccccccHH
Confidence 54322222333455688999998866655566789999999999999999999999999999886656787778899999
Q ss_pred HHHHHHhhhcCCCcHHHHHHHhCCCCCCCcccccCCHHHHHHHHhHhCCCCCccccchhcccccccCCceeeEeEEEEee
Q 038600 484 ALEVYRDRERKFARYNQLRRALLLIPISKWEDLTDDKEAIQALGEVHGDDVEKLDLLVGLMAEKKIKGFYYYIFIFRVII 563 (658)
Q Consensus 484 alnIqRgRDhGlp~Yn~~R~~cgl~~~~sFedL~~d~e~i~~L~~lY~~~vddVDL~vG~laE~~~~G~~~~~~~~~~i~ 563 (658)
|+|||||||||||+||+||++|||++++|||||+.|++++++|+++|+++|||||||||+++|++++|+.+
T Consensus 475 al~IqRgRDhGlp~YNefR~~~gL~~~~sFedlt~d~e~~~~L~~lY~~~vddVDL~VG~laE~~v~G~~v--------- 545 (633)
T PLN02283 475 ALEIYRDRERGVARYNEFRRNLLMIPISKWEDLTDDEEAIEVLREVYGDDVEKLDLLVGLMAEKKIKGFAI--------- 545 (633)
T ss_pred HHHHHhhhhcCCccHHHHHHHcCCCCCCCHHHcCCCHHHHHHHHHHhCCCHHHHHhhhhheecccCCCCCc---------
Confidence 99999999999999999999999999999999999999999999999768999999999999999999999
Q ss_pred ecCCceehhcchhhHHHHHHhhhccc-ccEEEecCCCCCCHHHHHHHhcCCCHHHHHHhhCCCCccccccCCcccccccC
Q 038600 564 HRSPIFSHLFKNTQFLIFVAELHSKL-YYFALVYFRLQTTKKGLEWVKKTESLKDVLDRHYPEITKKWMNSASAFSVWDS 642 (658)
Q Consensus 564 ~~GPt~~cii~~t~f~ifi~~~~~Rl-RF~ye~~~~~~fT~~ql~~I~~~~tl~~vic~~~~~~~~~~~~~~~~f~~w~~ 642 (658)
|||+.||+..+||+ .+++ ||||||++|++||++|++||++++||++|||||+|+++++|++|+|||+||+.
T Consensus 546 --G~T~~~i~~~~a~r------~~~gDRF~~en~np~~fT~~gl~~I~~t~tl~dvl~r~~p~~~~~~~~~~~~f~~w~~ 617 (633)
T PLN02283 546 --SETAFFIFLLMASR------RLEADRFFTSNFNEKTYTKKGLEWVNTTESLKDVIDRHYPEMTDKWMNSSSAFSVWDS 617 (633)
T ss_pred --CHHHHHHHHHHHHH------HhcCCCCeEecCCcCcCCHHHHHHHHccCcHHHHHHHhCcchhhhhhhcccCCCcCCC
Confidence 88888876655442 2344 99999999999999999999997799999999999999999999999999998
Q ss_pred CCCCCCCccccccCCC
Q 038600 643 PRKAYNPIPLYLRVPK 658 (658)
Q Consensus 643 ~~~~~~~~~~~~~~~~ 658 (658)
.+.+++|||||||+|+
T Consensus 618 ~~~~~~~~~~~~~~~~ 633 (633)
T PLN02283 618 PPNPHNWIPLYLRPPP 633 (633)
T ss_pred CCCCCCccceeeccCC
Confidence 8889999999999985
No 2
>KOG2408 consensus Peroxidase/oxygenase [General function prediction only]
Probab=100.00 E-value=9.7e-118 Score=1017.54 Aligned_cols=589 Identities=24% Similarity=0.289 Sum_probs=472.6
Q ss_pred HhhhhcccccchHHHHhhhhhhh---HHHhhhhhcccccCCCccCChhh-----HHHhHHhhHHHHHH-ccccccCCCCC
Q 038600 9 TAALLHYIHKDFHEAAARMTLID---CFLFLIVHSIDKLGIWPRLPVFV-----GLFYLGIRQHLHQE-YNLFNVGISPV 79 (658)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~w~~lp~~~-----gl~~l~~~r~~~~~-~nL~d~~~~~~ 79 (658)
.+.+..+++++++++++.++..+ +....+++...+...|.+.++.+ .+..+...++.... .+.......+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~s~~~~~~~~ 139 (719)
T KOG2408|consen 60 LRRRTVTIHPDLNELSSRTSDPDGKIRLLIKAVEVREKSLLLLKRPVILSDNATNVTDLLPERHLHVNPRASGCVCSQPP 139 (719)
T ss_pred hcccccccCCCHHHHhhhhcccchhhhhhhhhHHHHHhhhhhhhccccccccccccccccccccccccccccCcccCCCC
Confidence 34445689999999999999888 88888999999999999999877 22222222222111 11111111222
Q ss_pred CCCC-CCCCCcccCCCCCCcCcCCCCCCCCCCCcc--cCcccccccc-cC--CCCCCCCChHHHHHHHhhccCccCCCCc
Q 038600 80 GVRF-NPADYPYRRADGKYNDPFNYTRNKFNSTFN--IGKTQKKKKK-KA--GNVLMKPDPMVVATKLLARRNYKDTGKQ 153 (658)
Q Consensus 80 ~~~~-~~~~~~yRt~DGscNNl~~P~~G~a~t~f~--lpp~y~Dg~~-~s--~~~~~lP~pR~VS~~l~~~~~~~~~~~~ 153 (658)
+.|. +|.+.+|||+||+|||+.+|.||+++++|. +||.|+||.+ |. ..+.++|+||+||++|+.+.. .+++.+
T Consensus 140 ~~c~~~~~~~~yRt~dG~CNN~~~P~~Gas~~~~~Rllpp~Yedg~~~p~~~~~~~~lP~~R~vS~~l~~~~~-~~~~~~ 218 (719)
T KOG2408|consen 140 PVCLNDCFHSKYRTIDGTCNNLRNPTLGASNSPFRRLLPPKYEDGFSTPRGWSDGTPLPSARLVSNKLLSRSF-SPPDSK 218 (719)
T ss_pred CCccCcccccCccccccccCCCCCCCcccccChhhccCCccccccccCccccccCCCCCchHHhhHhhhcccc-CCCCcc
Confidence 2222 345799999999999999999999999999 9999999974 42 223678999999999998874 457999
Q ss_pred hhHHHHHHHHHHHhhhccccCC-----------CC--------ccceeCCCCCCC-CCCCcccccccccCCCCCC-CCCC
Q 038600 154 FNMIAASWIQFMIHDWVDHLED-----------TN--------QVELIAPNEVAD-KCPLSSFKFFKTKEVPTGF-YEMK 212 (658)
Q Consensus 154 ~n~l~~~wgQFi~HD~~~~~~~-----------~~--------~~~i~iP~~~~~-~~p~~~m~~~Rs~~~~~~~-~~~~ 212 (658)
+|+|+|+|||||+|||+.++.. |. +.+|.+|..+.- .-+..||+|+||.+.+... ....
T Consensus 219 ~~~~~mqwgQFi~HDl~~~~~~~~~~~~~~~~~C~~~~~~~p~C~pi~~p~~dp~~~~~~~C~~f~Rs~~~~~~~~~~~~ 298 (719)
T KOG2408|consen 219 FNHMAMQWGQFIDHDLYFTPLSTVQNGELNIRCCNKPQLPSPPCFPIKIPPNDPYFPSNQRCLPFVRSLPACGSGYNLGP 298 (719)
T ss_pred hhHHHHHHHHHhcccccccCCcccccCCccccccCCCcCCCCcccceecCCCCCccCCcccceeceecCCCccccccCCh
Confidence 9999999999999999998642 21 123334432211 1112799999999876532 2235
Q ss_pred cccccCCCCccCCccCCCCCHHHhhhhccCCC--Ceeeecc----CC--CcccCC--------------CCCcccCCCC-
Q 038600 213 TGTINTRTPWWDGSALYGSTMARLQKVRTFKD--GKLKISE----DG--LLLHDQ--------------DGIAVTGDVR- 269 (658)
Q Consensus 213 ~~q~N~~Ts~lD~S~IYGst~~~~~~LR~~~~--GkLk~~~----~g--~LP~~~--------------~~~~~aGD~R- 269 (658)
++|+|++|||||+|+||||+++.+++||.|++ |+|+++. .| ++|.+. ..|+.+||.|
T Consensus 299 reQlNq~T~~lD~S~IYGss~~~~~~lR~f~~~~g~l~~~~~~~~~~~~~lP~~~~~~~~c~~~~~~~~~~cf~aGD~R~ 378 (719)
T KOG2408|consen 299 REQLNQLTSFLDASVIYGSSDEDARKLRLFKDGKGLLRVDTGLFENGRPLLPFSTDPPNSCRSKPPGAPKPCFTAGDERA 378 (719)
T ss_pred hhhhccccccccchhccCCCHHHHHHHhcccCcccceeecccccccCcccCCCCCCCCccccccCCCCCCcccccCcccc
Confidence 79999999999999999999999999999999 7787762 23 677654 2478999999
Q ss_pred CcchhHHHHHHHHHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHHHHhhheeeeehhhHhhhccccccccccccccccccc
Q 038600 270 NSWAGVSLLEALFIKEHNSVCEAIKEENPHLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKTDTLDAGMHANWYGLLGK 349 (658)
Q Consensus 270 N~~pgL~~lhtlf~ReHNria~~L~~~nP~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~~~~~~~m~~nw~gl~g~ 349 (658)
|++|+|++|||+|+|||||||++|+++||+|+||+||||||+||+|++|||||+||||.|||... +
T Consensus 379 ~~~pgL~~~hti~lREHNRiA~~Lk~~np~W~dE~lfQeaRkI~~A~~q~Ity~e~LP~ilG~~~--------------~ 444 (719)
T KOG2408|consen 379 NEQPGLAALHTLFLREHNRIATELKALNPHWSDERLFQEARKIVGAQVQHITYNEYLPKLLGAPL--------------K 444 (719)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHHHhhhhHHhhhhhhcCccc--------------c
Confidence 99999999999999999999999999999999999999999999999999999999999998321 0
Q ss_pred ccccccCCCCccccCCCCCCCCCCCCCCCCccchhhH-hhhhh-cccCccccccCCCCCCCCCCCCCCcccccchhHHhc
Q 038600 350 KFKDTFGHVGGAILGGFVGMKRPEIHGVPYSLTEEFV-DVYRM-HSLLPDQLHLRDLTVPPGPNKSPRLAEKVDMANLIG 427 (658)
Q Consensus 350 ~~~~~~g~~~~~~~~g~~g~~~~~~~~v~~sis~EFa-aayRf-Hslip~~~~~~d~~~~~~~~~~~~l~~~~~l~d~~~ 427 (658)
...++|.| |++.++++|+|||+ ||||| |||||+.+.+.+.+......+ ..+++.+.++
T Consensus 445 -----------~~~g~~~g----Y~~~~dp~IsneFataAfRfgHsli~~~~~~l~~~~~~~~~~-----~~l~~~~~~~ 504 (719)
T KOG2408|consen 445 -----------VSLGGYRG----YDPNVDPTISNEFATAAFRFGHSLIPPFFQRLDENFQPIGEV-----VNLPLHDAFF 504 (719)
T ss_pred -----------cCCccccC----cCCCCChhhhhhhhHHHHhhhcccCchhhhhhcccCcccccc-----cCchhhhhhc
Confidence 11345555 78899999999998 89998 999999999966433222211 1456667777
Q ss_pred ccccccccccchHHHHHHhhhccccccccccccHHhhhhhccccCCCCCCCchhHHHHHHHHhhhcCCCcHHHHHHHhCC
Q 038600 428 LKGERTLSEIGFTRQMVSMGHQACGALVLWNYPRWLRNHVVQDMEGKERPDPVDLAALEVYRDRERKFARYNQLRRALLL 507 (658)
Q Consensus 428 ~~~~~~~~~~g~~~~l~g~~~q~~~~~~~~n~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~Yn~~R~~cgl 507 (658)
++. ..+.+.|++.+++||..+++...++..+..++++.+|...+.. ..+||+|||||||||||||+||+||++|||
T Consensus 505 ~~~-~i~~~ggid~llrGl~~~~~~~~~d~~~~~~i~~~lf~~~~~~---~~~DL~ainIQRgRDhGlp~Yn~yR~~cgL 580 (719)
T KOG2408|consen 505 NPW-LILNEGGIDPLLRGLTTQPAKMPDDQLLNGEITERLFVKTDED---GELDLAALNIQRGRDHGLPPYNEYRKFCGL 580 (719)
T ss_pred chh-hhhhccChhHHHHHHHhchhhcccchhcCHHHHHHHhhhcCcc---cccchhhhhhhccccCCCCCHHHHHHHcCC
Confidence 654 3345678999999999999988656788999999887533222 129999999999999999999999999999
Q ss_pred CCCCCccccc--CCHHHHHHHHhHhCCCCCccccchhcccccccCCceeeEeEEEEeeecCCceehhcchhhHHHHHHhh
Q 038600 508 IPISKWEDLT--DDKEAIQALGEVHGDDVEKLDLLVGLMAEKKIKGFYYYIFIFRVIIHRSPIFSHLFKNTQFLIFVAEL 585 (658)
Q Consensus 508 ~~~~sFedL~--~d~e~i~~L~~lY~~~vddVDL~vG~laE~~~~G~~~~~~~~~~i~~~GPt~~cii~~t~f~ifi~~~ 585 (658)
+++++||||+ .+++++++|+++|+ ++||||||||+++|++++|+.| |||++|||++|| .+
T Consensus 581 ~~~~s~edL~~~i~~~~~~kl~~lY~-~~ddiDL~vG~~~E~~~~g~~v-----------GPTl~cii~~Qf------~r 642 (719)
T KOG2408|consen 581 SPATSFEDLSDEIEPEIINKLRTLYG-TPDDIDLYVGLLLEKPLPGGLV-----------GPTLACIIAEQF------LR 642 (719)
T ss_pred CCCCCHHHhhhhhhHHHHHHHHHhcC-CchhhcccccccccccCCCcee-----------cccHHHHHHHHH------HH
Confidence 9999999999 45779999999999 9999999999999999999999 999999999974 24
Q ss_pred hccc-ccEEEecCCCCCCHHHHHHHhcCCCHHHHHHhhCCCCccccccCCcccccccCCCCCCCCcccccc
Q 038600 586 HSKL-YYFALVYFRLQTTKKGLEWVKKTESLKDVLDRHYPEITKKWMNSASAFSVWDSPRKAYNPIPLYLR 655 (658)
Q Consensus 586 ~~Rl-RF~ye~~~~~~fT~~ql~~I~~~~tl~~vic~~~~~~~~~~~~~~~~f~~w~~~~~~~~~~~~~~~ 655 (658)
.|.+ ||||||+++++||++||+||+|+ ||++|||+|.+.+.+.++.....+..|.....+++.||.+-.
T Consensus 643 ~r~gDRf~yen~~~~~Ft~~QL~ei~k~-sLariiC~N~~~~~~~~~~~~f~~~~~~~~~~~c~~ip~~dl 712 (719)
T KOG2408|consen 643 LRDGDRFWYENFNPGVFTPEQLEEIRKV-SLARIICDNGTKITKVSRFDVFDFPDAPNDPVPCSSIPGLDL 712 (719)
T ss_pred HhccCceeecCCCCCccCHHHHHHHHHh-hchheeecCCcccccccccCCccccccCCCCCCccccchhhh
Confidence 5566 99999988999999999999999 999999999889887765555556688878889999998754
No 3
>PF03098 An_peroxidase: Animal haem peroxidase; InterPro: IPR002007 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. On the basis of sequence similarity, a number of animal haem peroxidases can be categorised as members of a superfamily: myeloperoxidase (MPO); eosinophil peroxidase (EPO); lactoperoxidase (LPO); thyroid peroxidase (TPO); prostaglandin H synthase (PGHS); and peroxidasin [, , ]. MPO plays a major role in the oxygen-dependent microbicidal system of neutrophils. EPO from eosinophilic granulocytes participates in immunological reactions, and potentiates tumor necrosis factor (TNF) production and hydrogen peroxide release by human monocyte-derived macrophages [, ]. In the main, MPO (and possibly EPO) utilises Cl-ions and H2O2 to form hypochlorous acid (HOCl), which can effectively kill bacteria or parasites. In secreted fluids, LPO catalyses the oxidation of thiocyanate ions (SCN-) by H2O2, producing the weak oxidising agent hypothiocyanite (OSCN-), which has bacteriostatic activity []. TPO uses I- ions and H2O2 to generate iodine, and plays a central role in the biosynthesis of thyroid hormones T(3) and T(4). To date, the 3D structures of MPO and PGHS have been reported. MPO is a homodimer: each monomer consists of a light (A or B) and a heavy (C or D) chain resulting from post-translational excision of 6 residues from the common precursor. Monomers are linked by a single inter-chain disulphide. Each monomer includes a bound calcium ion []. PGHS exists as a symmetric dimer, each monomer of which consists of 3 domains: an N-terminal epidermal growth factor (EGF) like module; a membrane-binding domain; and a large C-terminal catalytic domain containing the cyclooxygenase and the peroxidase active sites. The catalytic domain shows striking structural similarity to MPO. The cyclooxygenase active site, which catalyses the formation of prostaglandin G2 (PGG2) from arachidonic acid, resides at the apex of a long hydrophobic channel, extending from the membrane-binding domain to the centre of the molecule. The peroxidase active site, which catalyses the reduction of PGG2 to PGH2, is located on the other side of the molecule, at the haem binding site []. Both MPO and the catalytic domain of PGHS are mainly alpha-helical, 19 helices being identified as topologically and spatially equivalent; PGHS contains 5 additional N-terminal helices that have no equivalent in MPO. In both proteins, three Asn residues in each monomer are glycosylated.; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1FE2_A 1PGG_B 1PGF_A 3N8W_B 1IGZ_A 3KK6_B 3N8Z_A 1Q4G_A 1PTH_A 1EQH_A ....
Probab=100.00 E-value=2.1e-115 Score=986.08 Aligned_cols=492 Identities=26% Similarity=0.377 Sum_probs=371.2
Q ss_pred ccCCCCCCcCcCCCCCCCCCCCcc--cCcccccccc-c--CCCCCCCCChHHHHHHHhhccCc-cCCCCchhHHHHHHHH
Q 038600 90 YRRADGKYNDPFNYTRNKFNSTFN--IGKTQKKKKK-K--AGNVLMKPDPMVVATKLLARRNY-KDTGKQFNMIAASWIQ 163 (658)
Q Consensus 90 yRt~DGscNNl~~P~~G~a~t~f~--lpp~y~Dg~~-~--s~~~~~lP~pR~VS~~l~~~~~~-~~~~~~~n~l~~~wgQ 163 (658)
|||+||+|||+.||.||++|++|. +||.|+||++ | +..+..||+||+||++|+.+.+. .+.+..+|+|+++|||
T Consensus 1 yRt~dG~cNN~~~p~~G~~~~~~~Rllp~~Y~dg~~~pr~~~~g~~lP~pR~is~~l~~~~~~~~~~~~~~t~l~~~~gQ 80 (530)
T PF03098_consen 1 YRTYDGSCNNLANPSWGAAGTPFRRLLPPAYADGVSEPRGSSNGSPLPNPREISNALFRRKDGFDPSHSGLTALFMQWGQ 80 (530)
T ss_dssp S--SSSTTSSSSSTTTT-SSEE-BESS-B--TTSSSBTTTSBTTBS---HHHHHHHHTB-SSGTTBEEEEEEHHHHHHHH
T ss_pred CCCCCCCccCCCcccccCCCCcccccCCccccccccccccccCCccCCCHHHHHHHHhhcccccCCCCCcchHHHHHHHH
Confidence 899999999999999999999999 9999999985 3 35678899999999999998763 4456789999999999
Q ss_pred HHHhhhccccCCC------CccceeCCCCCCCCCC-CcccccccccCCCCC--CCCCCcccccCCCCccCCccCCCCCHH
Q 038600 164 FMIHDWVDHLEDT------NQVELIAPNEVADKCP-LSSFKFFKTKEVPTG--FYEMKTGTINTRTPWWDGSALYGSTMA 234 (658)
Q Consensus 164 Fi~HD~~~~~~~~------~~~~i~iP~~~~~~~p-~~~m~~~Rs~~~~~~--~~~~~~~q~N~~Ts~lD~S~IYGst~~ 234 (658)
||+|||++++... ++.+|.||..++.-.+ ..||+|.||.+++.. .|..+++|+|++|||||||+||||+++
T Consensus 81 fi~HDi~~~~~~~~C~~~~~c~~I~ip~~Dp~~~~~~~c~~~~Rs~~~~~~~~~~~~~req~N~~T~~lD~S~vYGs~~~ 160 (530)
T PF03098_consen 81 FIDHDITLTPDSSSCSDHPECFPIPIPPDDPFYRPFVRCMPFTRSAPAPDPGQSCSLPREQINQATSYLDLSQVYGSSEE 160 (530)
T ss_dssp HHHHHH--BEBTTTHHCBTTB--EE--TTEHHHHHTTSEE--B-B-BSSTSSS-SSSSTTBEE-STSSSS-HHHH-SSHH
T ss_pred HHhhhhccccccccccCCCCccccccCCCcccccCCCCCcccccccccccCCCCCccchhhhccccceeecccccCCCHH
Confidence 9999999986542 3456666654421001 689999999987642 234477999999999999999999999
Q ss_pred Hhhhhcc-CCCCeeeecc------C--CCcccCCC------CCcccCCCC-CcchhHHHHHHHHHHhhhHHHHHHHhhCC
Q 038600 235 RLQKVRT-FKDGKLKISE------D--GLLLHDQD------GIAVTGDVR-NSWAGVSLLEALFIKEHNSVCEAIKEENP 298 (658)
Q Consensus 235 ~~~~LR~-~~~GkLk~~~------~--g~LP~~~~------~~~~aGD~R-N~~pgL~~lhtlf~ReHNria~~L~~~nP 298 (658)
++++||+ +++|+|+++. . ++||.+.. .|+++||.| ||+|+|++|||+|+|||||||++|+++||
T Consensus 161 ~~~~LR~~~~~G~L~~~~~~~~~~~~~~~lp~~~~~~~~~~~~f~~GD~R~ne~~~l~~lhtlflReHNria~~L~~~np 240 (530)
T PF03098_consen 161 QARRLRSSFKGGKLKSDNGEFPPPNGGGLLPSDDPPTDSGCRCFLAGDPRVNENPGLTALHTLFLREHNRIADELKKINP 240 (530)
T ss_dssp HHHHTBESSTTTEB--ETSSEEBBTTBES--B-TSCSSGHHGSB-TSSTTTTSBHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHhhcchhhhhhhcccccccccCCCCCCCCCcccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999 9999999731 2 38887752 368999999 99999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHhhheeeeehhhHhhhcccccccccccccccccccccccccCCCCccccCCCCCCCCCCCCCCC
Q 038600 299 HLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKTDTLDAGMHANWYGLLGKKFKDTFGHVGGAILGGFVGMKRPEIHGVP 378 (658)
Q Consensus 299 ~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~g~~~~~~~~v~ 378 (658)
+|+||+||||||+||+|+||||||+||||+|||.+.+. ++++. ....|+ +..|+++++
T Consensus 241 ~w~de~lFqeAR~iv~a~~Q~Ivy~E~LP~llG~~~~~------~~~~~-------------~~~~g~---~~~y~~~~~ 298 (530)
T PF03098_consen 241 HWDDERLFQEARRIVIAQYQHIVYNEYLPALLGPEAMN------KFLLP-------------PLNNGY---YKGYDPSVD 298 (530)
T ss_dssp TS-HHHHHHHHHHHHHHHHHHHHHHTTHHHHHGHGGHH------HHS-G-----------------GC---GTTS-TTS-
T ss_pred CCChhHHHHHHHHHHHHHHhhhhHhhhhhhhcchhhhh------hcccc-------------cccccc---ccCCCCCCC
Confidence 99999999999999999999999999999999987543 11110 011122 345889999
Q ss_pred CccchhhH-hhhhh-cccCccccccCCCCCCCCCCCCCCcccccchhHHhcccccccccccchHHHHHHhhhccccccc-
Q 038600 379 YSLTEEFV-DVYRM-HSLLPDQLHLRDLTVPPGPNKSPRLAEKVDMANLIGLKGERTLSEIGFTRQMVSMGHQACGALV- 455 (658)
Q Consensus 379 ~sis~EFa-aayRf-Hslip~~~~~~d~~~~~~~~~~~~l~~~~~l~d~~~~~~~~~~~~~g~~~~l~g~~~q~~~~~~- 455 (658)
++|++||+ ||||| |||||+.+.+.+.+. .. ...+++|.+.++++....+.+.+++.+++|+..|.+++++
T Consensus 299 ~~i~~EFa~aA~RfgHs~i~~~~~~~~~~~---~~----~~~~~~L~d~f~~~~~~~~~~~gid~ll~G~~~~~a~~~d~ 371 (530)
T PF03098_consen 299 PSISNEFAAAAYRFGHSMIPDTYDRWDENF---EI----PEPSLPLSDAFFNPSNRLLEEGGIDPLLRGLASQPAQKVDN 371 (530)
T ss_dssp -S-BTTH-HHHGGGGGGGS-SEEEEBTTTS---BE----TTSEEEGGGGBT-HH-HHHTTTCSHHHHHHHHHSEEEHHBT
T ss_pred CchhHHHHHHHHHhhheeehhhhhhccccC---Cc----ccccccccccccCcchhhhhccchHHHHhHHhhCccccccH
Confidence 99999996 89999 999999999865321 10 1236789999998762334567899999999999999876
Q ss_pred cccccHHhhhhhccccCCCCCCCchhHHHHHHHHhhhcCCCcHHHHHHHhCCCCCCCcccc---cCCHHHHHHHHhHhCC
Q 038600 456 LWNYPRWLRNHVVQDMEGKERPDPVDLAALEVYRDRERKFARYNQLRRALLLIPISKWEDL---TDDKEAIQALGEVHGD 532 (658)
Q Consensus 456 ~~n~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~Yn~~R~~cgl~~~~sFedL---~~d~e~i~~L~~lY~~ 532 (658)
...+.+.|++.+|.. .+. +..+||+|+|||||||||||+||+||++|||+++++|+|| +.+++++++|+++|+
T Consensus 372 ~~~~~~~l~~~lf~~-~~~--~~~~DL~a~nIqRGRdhGLp~yn~~R~~cgl~~~~sf~dl~~~~~~~~i~~~L~~~Y~- 447 (530)
T PF03098_consen 372 PRFLVDDLRNHLFGP-RNV--PGSLDLAALNIQRGRDHGLPSYNDYREFCGLPPATSFEDLTDEISDEEIAAALRALYG- 447 (530)
T ss_dssp TBHSHHHHHTSEEST-TSS--SEEEHHHHHHHHHHHHTTB-BHHHHHHHTT----SSHHHHHHHHTSHHHHHHHHHHHS-
T ss_pred HHHhhhHhhcccccc-cCC--cchhHHHHHHHHHHHHhCCchHHHHHHHhccCCCCCHHHhhhhhhHHHHHHHHHHhcc-
Confidence 245788899988632 121 2236999999999999999999999999999999999999 578999999999998
Q ss_pred CCCccccchhcccccccCCceeeEeEEEEeeecCCceehhcchhhHHHHHHhhhccc-ccEEEecCCCCCCHHHHHHHhc
Q 038600 533 DVEKLDLLVGLMAEKKIKGFYYYIFIFRVIIHRSPIFSHLFKNTQFLIFVAELHSKL-YYFALVYFRLQTTKKGLEWVKK 611 (658)
Q Consensus 533 ~vddVDL~vG~laE~~~~G~~~~~~~~~~i~~~GPt~~cii~~t~f~ifi~~~~~Rl-RF~ye~~~~~~fT~~ql~~I~~ 611 (658)
+|||||||||+++|++++|+.+ |||++|||++||. .++++ ||||| |+++||++|+++|+|
T Consensus 448 ~vddvDL~vG~laE~~~~G~~l-----------Gpt~~~Ii~~qf~------~l~~gDRf~ye--n~~~ft~~ql~~i~~ 508 (530)
T PF03098_consen 448 HVDDVDLWVGGLAEKPVPGGLL-----------GPTFSCIIAEQFS------RLRRGDRFWYE--NPGSFTPEQLEEIRK 508 (530)
T ss_dssp SGGGSBHHHHHHHS-BSTTSSS-----------BHHHHHHHHHHHH------HHHHTSTTGTT--SCTTCTHHHHHHHTT
T ss_pred chhcccccceeeeeccccCCCC-----------CHHHHhHHHHHHH------HHHhcCccccc--CcCcCCHHHHHHHHH
Confidence 9999999999999999999999 9999999999854 45777 99999 779999999999999
Q ss_pred CCCHHHHHHhhCCCCccccccCCccc
Q 038600 612 TESLKDVLDRHYPEITKKWMNSASAF 637 (658)
Q Consensus 612 ~~tl~~vic~~~~~~~~~~~~~~~~f 637 (658)
+ ||++|||+|+++++ ..+.|||
T Consensus 509 ~-tla~iic~n~~~~~---~iq~~~F 530 (530)
T PF03098_consen 509 T-TLARIICDNTDDIT---RIQPNAF 530 (530)
T ss_dssp T--HHHHHHHHSTS-S---EEESSTT
T ss_pred C-CHHHHHHhcCCccc---cCCCCCC
Confidence 9 99999999999985 4678887
No 4
>KOG1712 consensus Adenine phosphoribosyl transferases [Nucleotide transport and metabolism]
Probab=38.74 E-value=8.9 Score=37.18 Aligned_cols=51 Identities=25% Similarity=0.472 Sum_probs=34.0
Q ss_pred CCccccc---CCHHHHHHHHhH----hCCCC-CccccchhcccccccCCceeeEeEEEEeeecCCceehhcchh
Q 038600 511 SKWEDLT---DDKEAIQALGEV----HGDDV-EKLDLLVGLMAEKKIKGFYYYIFIFRVIIHRSPIFSHLFKNT 576 (658)
Q Consensus 511 ~sFedL~---~d~e~i~~L~~l----Y~~~v-ddVDL~vG~laE~~~~G~~~~~~~~~~i~~~GPt~~cii~~t 576 (658)
--|+|++ .||...+.+..+ |.... .+||..+|.=| .|++| ||+.+--++--
T Consensus 26 I~F~Di~pll~dP~af~~lidlf~~h~~~~~~~~Id~iaGlEa----RGFLF-----------GP~iAlalG~~ 84 (183)
T KOG1712|consen 26 IMFQDITPLLLDPKAFKKLIDLFVDHYRETFEMKIDVIAGLEA----RGFLF-----------GPSIALALGAG 84 (183)
T ss_pred eehhhhhhhhcCHHHHHHHHHHHHHHHHHHhcCcceEEEeeee----cceec-----------CcHHHHHhCCC
Confidence 4688887 587665555444 44223 34999999755 69999 99887655543
No 5
>PLN00107 FAD-dependent oxidoreductase; Provisional
Probab=38.54 E-value=15 Score=38.28 Aligned_cols=46 Identities=9% Similarity=0.138 Sum_probs=39.0
Q ss_pred HHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHHHHhhheeeeehhhHhhhcc
Q 038600 282 FIKEHNSVCEAIKEENPHLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKT 332 (658)
Q Consensus 282 f~ReHNria~~L~~~nP~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~ 332 (658)
|-+.||.-++.|++++|.|+| |.+.|+-. -=+.+-.||||-.|||.
T Consensus 160 WGK~h~l~~~~l~~lYPr~~d---FlavR~~l--DP~G~F~N~yl~rllg~ 205 (257)
T PLN00107 160 WGKNRNAAFDGAIAKYKKAGE---FLKVKERL--DPEGLFSSEWSDKILGL 205 (257)
T ss_pred chhccCCCHHHHHHHCcCHHH---HHHHHHHh--CCCCccCCHHHHHHhCc
Confidence 778899999999999999986 77777643 55788889999999875
No 6
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=27.03 E-value=52 Score=26.42 Aligned_cols=16 Identities=19% Similarity=0.389 Sum_probs=14.2
Q ss_pred HhhCCCCCcHHHHHHH
Q 038600 294 KEENPHLSDEELYRFG 309 (658)
Q Consensus 294 ~~~nP~W~DE~LfqeA 309 (658)
-+.||+||-.+|||.|
T Consensus 18 ie~hP~WDQ~Rl~~aA 33 (57)
T PF10929_consen 18 IETHPNWDQYRLFQAA 33 (57)
T ss_pred HHcCCCchHHHHHHHH
Confidence 3579999999999998
No 7
>TIGR01677 pln_FAD_oxido plant-specific FAD-dependent oxidoreductase. This model represents an uncharacterized plant-specific family of FAD-dependent oxidoreductases. At least seven distinct members are found in Arabidopsis thaliana. The family shows considerable sequence similarity to three different enzymes of ascorbic acid biosynthesis: L-galactono-1,4-lactone dehydrogenase (EC 1.3.2.3) from higher plants, D-arabinono-1,4-lactone oxidase (EC 1.1.3.37 from Saccharomyces cerevisiae, and L-gulonolactone oxidase (EC 1.1.3.8) from mouse, as well as to a bacterial sorbitol oxidase. The class of compound acted on by members of this family is unknown.
Probab=26.24 E-value=33 Score=40.02 Aligned_cols=59 Identities=14% Similarity=0.171 Sum_probs=47.7
Q ss_pred CCcchhHHHHHHH----------HHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHHHHhhheeeeehhhHhhhcc
Q 038600 269 RNSWAGVSLLEAL----------FIKEHNSVCEAIKEENPHLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKT 332 (658)
Q Consensus 269 RN~~pgL~~lhtl----------f~ReHNria~~L~~~nP~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~ 332 (658)
|+..+-+..+.-| |-+.|+..++.|+++||+|+| |++.|+-. -=+.+-.|+||-.|||.
T Consensus 443 ~~~~~~f~~~E~i~l~~yggRPHWGK~h~~~~~~l~~~YP~~~d---F~alR~~~--DP~g~F~N~yl~~l~~~ 511 (557)
T TIGR01677 443 RLYEDVIEEIEQMAFFKYGALPHWGKNRNLAFDGVIRKYPNADK---FLKVKDSY--DPKGLFSSEWSDEILGI 511 (557)
T ss_pred chHHHHHHHHHHHHHhhcCCCCCccccccchHHHHHHhCCCHHH---HHHHHHhc--CCCCccCCHHHHHHhCc
Confidence 4456677788887 778899999999999999987 77777643 45778889999999875
No 8
>PLN02465 L-galactono-1,4-lactone dehydrogenase
Probab=25.84 E-value=31 Score=40.25 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=37.6
Q ss_pred HHHhhh--------HHHHHHHhhCCCCCcHHHHHHHHHHHHHhhheeeeehhhHhhhcc
Q 038600 282 FIKEHN--------SVCEAIKEENPHLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKT 332 (658)
Q Consensus 282 f~ReHN--------ria~~L~~~nP~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~ 332 (658)
|-+.|. .-+++|++++| |+| |+.+|+-. -=|.|-.|+||-.|+|.
T Consensus 520 WgK~h~~~~~~~~~~~~~~L~~~YP-~d~---F~~~R~~l--DP~g~f~N~~L~~lf~~ 572 (573)
T PLN02465 520 WAKIEVPKDKEELEALRERLRKRFP-VDA---FNKARKEL--DPKGILSNNLLEKLFPK 572 (573)
T ss_pred cceeccccccchhhcCHHHHHhhCC-HHH---HHHHHHHh--CCCCccCCHHHHHhhCC
Confidence 456788 89999999999 977 99999865 56888899999888764
No 9
>PF08880 QLQ: QLQ; InterPro: IPR014978 QLQ is named after the conserved Gln, Leu, Gln motif. QLQ is found at the N terminus of SWI2/SNF2 protein, which has been shown to be involved in protein-protein interactions. QLQ has been postulated to be involved in mediating protein interactions []. ; GO: 0005524 ATP binding, 0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=11.69 E-value=1.5e+02 Score=21.64 Aligned_cols=26 Identities=19% Similarity=0.109 Sum_probs=18.8
Q ss_pred CCCCHHHHHHHhcCCCHHHHHHhhCC
Q 038600 599 LQTTKKGLEWVKKTESLKDVLDRHYP 624 (658)
Q Consensus 599 ~~fT~~ql~~I~~~~tl~~vic~~~~ 624 (658)
+.||++|++++|.--.--+.|.+|.|
T Consensus 1 s~FT~~Ql~~L~~Qi~ayK~l~~~~p 26 (37)
T PF08880_consen 1 SPFTPAQLQELRAQILAYKYLARNQP 26 (37)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 47999999999876244566666654
No 10
>PF02845 CUE: CUE domain; InterPro: IPR003892 This domain may be involved in binding ubiquitin-conjugating enzymes (UBCs). CUE domains also occur in two proteins of the IL-1 signal transduction pathway, tollip and TAB2.; GO: 0005515 protein binding; PDB: 2EKF_A 1OTR_A 1P3Q_Q 1MN3_A 1WGL_A 2EJS_A 2DAE_A 2DHY_A 2DI0_A.
Probab=11.34 E-value=1.9e+02 Score=21.14 Aligned_cols=20 Identities=20% Similarity=0.327 Sum_probs=15.1
Q ss_pred HHHHHHHhhCCCCCcHHHHH
Q 038600 288 SVCEAIKEENPHLSDEELYR 307 (658)
Q Consensus 288 ria~~L~~~nP~W~DE~Lfq 307 (658)
-..+.|+...|+|+.|.|=+
T Consensus 3 ~~v~~L~~mFP~~~~~~I~~ 22 (42)
T PF02845_consen 3 EMVQQLQEMFPDLDREVIEA 22 (42)
T ss_dssp HHHHHHHHHSSSS-HHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHH
Confidence 45688999999999987644
Done!