Query 038600
Match_columns 658
No_of_seqs 234 out of 1155
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 22:06:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q9k_A Lactoperoxidase, LPO; b 100.0 9E-123 3E-127 1046.8 32.4 494 82-639 14-569 (595)
2 3nt1_A Prostaglandin-endoperox 100.0 1E-101 5E-106 871.5 25.7 434 80-643 96-555 (587)
3 1q4g_A Prostaglandin G/H synth 100.0 6E-101 2E-105 866.4 26.0 421 101-639 104-551 (553)
4 1d2v_C Myeloperoxidase; heme-p 100.0 9.6E-98 3E-102 825.0 26.0 401 178-641 13-444 (466)
5 1d2v_A Myeloperoxidase; heme-p 99.9 8.7E-27 3E-31 207.2 7.1 87 87-173 4-101 (104)
6 1rpb_A Tricyclic peptide RP 71 17.0 42 0.0014 21.0 0.7 7 95-101 5-11 (26)
7 3lqv_P Splicing factor 3B subu 13.4 1.2E+02 0.0041 21.5 2.4 18 288-305 11-28 (39)
8 1b1v_A PSP1, protein (plasmato 12.8 68 0.0023 20.2 0.9 12 87-98 9-20 (26)
9 2eqq_A GBP, growth-blocking pe 11.1 76 0.0026 20.4 0.7 12 87-98 9-20 (28)
10 2ju0_B Phosphatidylinositol 4- 9.6 1.1E+02 0.0036 23.2 1.2 18 306-324 5-22 (52)
No 1
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=8.8e-123 Score=1046.85 Aligned_cols=494 Identities=19% Similarity=0.221 Sum_probs=414.2
Q ss_pred CCCCCCCcccCCCCCCcCcCCCCCCCCCCCcc--cCcccccccc-cC-------CCCCCCCChHHHHHHHhhcc-CccCC
Q 038600 82 RFNPADYPYRRADGKYNDPFNYTRNKFNSTFN--IGKTQKKKKK-KA-------GNVLMKPDPMVVATKLLARR-NYKDT 150 (658)
Q Consensus 82 ~~~~~~~~yRt~DGscNNl~~P~~G~a~t~f~--lpp~y~Dg~~-~s-------~~~~~lP~pR~VS~~l~~~~-~~~~~ 150 (658)
.|+. ..+|||+||+|||+.||.||+|+++|. +||.|+||++ |. .+|.+||+||+||++|+... +...+
T Consensus 14 ~C~~-~~~yRt~DG~CNNl~~P~wGaa~t~f~R~lpp~Y~DGv~~Pr~~~~~~~~~g~~lP~~R~VS~~l~~~~~~~~~~ 92 (595)
T 3q9k_A 14 KCDE-NSPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTRNGFRVPLAREVSNKIVGYLDEEGVL 92 (595)
T ss_dssp CCCS-SCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCHHHHHHHHTCCSCCTTCE
T ss_pred CCCC-CCCccCCCCCccCcCCcccCCCCCCccCCCCcccccccccccccccccccCCCCCCCHHHHHHHHHhcccccCCC
Confidence 3443 379999999999999999999999999 9999999985 32 35778999999999999632 22236
Q ss_pred CCchhHHHHHHHHHHHhhhccccCC---------------C----CccceeCCCCCCC-CCCCcccccccccCCCCCCCC
Q 038600 151 GKQFNMIAASWIQFMIHDWVDHLED---------------T----NQVELIAPNEVAD-KCPLSSFKFFKTKEVPTGFYE 210 (658)
Q Consensus 151 ~~~~n~l~~~wgQFi~HD~~~~~~~---------------~----~~~~i~iP~~~~~-~~p~~~m~~~Rs~~~~~~~~~ 210 (658)
+..+|+|+|+|||||+|||++++.. | ++.||.||..++- .+...||+|+||.+++..+..
T Consensus 93 ~~~~t~~~~~wGQfi~HDi~~t~~~~~~~~~~~~~~C~~~c~~~~~C~pI~ip~~Dp~~~~~~~Cm~f~RS~~~~~~~~~ 172 (595)
T 3q9k_A 93 DQNRSLLFMQWGQIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPKLKTQGKCMPFFRAGFVCPTPPY 172 (595)
T ss_dssp EEEEEHHHHHHHHHHHHHHCCCCBCCSCTTCSHHHHHHHHCCCBTTBCCEECCTTCHHHHHSCSEECCBCBCBSSCSSCC
T ss_pred CCCchHHHHHHHHHHHhhhhccCccccccccCCCcCccccccCCCCceeeeCCCCCCcccCCCceeEeecCCCcCCCCCC
Confidence 7889999999999999999987432 1 1346666654421 123469999999987642222
Q ss_pred C--CcccccCCCCccCCccCCCCCHHHhhhhccCCC--Ceeeecc----CC--CcccCC--------------CCCcccC
Q 038600 211 M--KTGTINTRTPWWDGSALYGSTMARLQKVRTFKD--GKLKISE----DG--LLLHDQ--------------DGIAVTG 266 (658)
Q Consensus 211 ~--~~~q~N~~Ts~lD~S~IYGst~~~~~~LR~~~~--GkLk~~~----~g--~LP~~~--------------~~~~~aG 266 (658)
. +++|+|++|||||||+||||+++++++||++++ ||||++. +| +||.+. ..|+++|
T Consensus 173 ~~~~reQiN~~Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~~~~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~aG 252 (595)
T 3q9k_A 173 QSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAG 252 (595)
T ss_dssp CSSCCCBEECSCSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSSCCBTTBCCCCBCCCSSCHHHHTCTTTCCCCBCCS
T ss_pred CcchHhhhccccceeeeeeccCCCHHHHHHHhCCCCCCceeecccccCCCCccCCCCCCCCCCcccccCCCCCCcccccC
Confidence 2 679999999999999999999999999999998 9999875 45 788742 1288999
Q ss_pred CCC-CcchhHHHHHHHHHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHHHHhhheeeeehhhHhhhccccccccccccccc
Q 038600 267 DVR-NSWAGVSLLEALFIKEHNSVCEAIKEENPHLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKTDTLDAGMHANWYG 345 (658)
Q Consensus 267 D~R-N~~pgL~~lhtlf~ReHNria~~L~~~nP~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~~~~~~~m~~nw~g 345 (658)
|.| ||+|+|++|||||+|||||||++|+++||+|+||+||||||+||+|+||||||+||||.|||.+ +.+
T Consensus 253 D~R~ne~p~L~~lhtlflREHNria~~L~~~nP~W~dE~LfQeAR~Iv~A~~Q~Ity~E~LP~ilG~~-~~~-------- 323 (595)
T 3q9k_A 253 DFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSE-MQK-------- 323 (595)
T ss_dssp STTTTSBHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGG-HHH--------
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHHHHHHHhCch-hhh--------
Confidence 999 9999999999999999999999999999999999999999999999999999999999999987 321
Q ss_pred ccccccccccCCCCccccCCCCCCCCCCCCCCCCccchhhHhhhhh-cccCccccccCCCCCCCCCCCCCCcccccchhH
Q 038600 346 LLGKKFKDTFGHVGGAILGGFVGMKRPEIHGVPYSLTEEFVDVYRM-HSLLPDQLHLRDLTVPPGPNKSPRLAEKVDMAN 424 (658)
Q Consensus 346 l~g~~~~~~~g~~~~~~~~g~~g~~~~~~~~v~~sis~EFaaayRf-Hslip~~~~~~d~~~~~~~~~~~~l~~~~~l~d 424 (658)
+ ...|.| |+++++|+|++||+||||| |||||+.+.+.+.+...... ...++|.+
T Consensus 324 ~----------------~~~~~g----Y~~~v~p~i~neF~aafRfgHsli~~~~~~~~~~~~~~~~-----~~~~~L~~ 378 (595)
T 3q9k_A 324 W----------------IPPYQG----YNNSVDPRISNVFTFAFRFGHMEVPSTVSRLDENYQPWGP-----EAELPLHT 378 (595)
T ss_dssp H----------------SCSCCC----CCTTSCCCCBTTHHHHGGGGGGGCCSEEECBCTTSSBCST-----TCEEEGGG
T ss_pred h----------------CCCccC----CCCCCCCccHHHHHHHHHhHHhhCcchhhccCccccccCC-----CCceeHHH
Confidence 0 122334 7789999999999889999 99999999985532111101 13788999
Q ss_pred HhcccccccccccchHHHHHHhhhcccccc-ccccccHHhhhhhccccCCCCCCCchhHHHHHHHHhhhcCCCcHHHHHH
Q 038600 425 LIGLKGERTLSEIGFTRQMVSMGHQACGAL-VLWNYPRWLRNHVVQDMEGKERPDPVDLAALEVYRDRERKFARYNQLRR 503 (658)
Q Consensus 425 ~~~~~~~~~~~~~g~~~~l~g~~~q~~~~~-~~~n~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~Yn~~R~ 503 (658)
.+|++.. .+.+.|++.+++||+.|+++.+ .+++++++|++++|+.. + ..+++||+|+|||||||||||+||+||+
T Consensus 379 ~ff~~~~-~~~~~gid~llrGl~~q~a~~~~~d~~~~~~l~~~Lf~~~-~--~~~g~DL~alnIqRgRdhGlp~yn~~R~ 454 (595)
T 3q9k_A 379 LFFNTWR-IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPT-H--KIHGFDLAAINLQRCRDHGMPGYNSWRG 454 (595)
T ss_dssp GBTCCHH-HHTTTCSHHHHHHHHHSEEECCCTTSCSCHHHHTCEECTT-S--CSEEECHHHHHHHHHHHTTCCCHHHHHH
T ss_pred HhcChHH-hhhccchHHHHHHHhhCcccccCCCccCCHHHHHHhccCC-C--ccccccHHHHHHHHHHHhCCCCHHHHHH
Confidence 9998753 3456789999999999999843 24689999999887532 1 1238999999999999999999999999
Q ss_pred HhCCCCCCCccccc---CCHHHHHHHHhHhCCCCCccccchhcccccccCCceeeEeEEEEeeecCCceehhcchhhHHH
Q 038600 504 ALLLIPISKWEDLT---DDKEAIQALGEVHGDDVEKLDLLVGLMAEKKIKGFYYYIFIFRVIIHRSPIFSHLFKNTQFLI 580 (658)
Q Consensus 504 ~cgl~~~~sFedL~---~d~e~i~~L~~lY~~~vddVDL~vG~laE~~~~G~~~~~~~~~~i~~~GPt~~cii~~t~f~i 580 (658)
+|||+++++|+||+ .|++++++|+++|+ +|||||||||+++|++++|+.+ ||||+|||++||
T Consensus 455 ~~gl~~~~sf~dl~~~~~~~~~~~~l~~lY~-~~d~iDl~vG~l~E~~~~g~~~-----------Gptf~~ii~~qf--- 519 (595)
T 3q9k_A 455 FCGLSQPKTLKGLQTVLKNKILAKKLMDLYK-TPDNIDIWIGGNAEPMVERGRV-----------GPLLACLLGRQF--- 519 (595)
T ss_dssp HTTCCCCCSHHHHHHHHTCHHHHHHHHHHHS-SGGGSCHHHHHHHSCCCTTBSS-----------CHHHHHHHHHHH---
T ss_pred HcCCCCCCCHHHHhhhcCcHHHHHHHHHHhC-CccccceeecccccccCCCCCc-----------CHHHHHHHHHHH---
Confidence 99999999999999 79999999999999 9999999999999999999999 999999999984
Q ss_pred HHHhhhccc-ccEEEecCCCCCCHHHHHHHhcCCCHHHHHHhhCCCCccccccCCccccc
Q 038600 581 FVAELHSKL-YYFALVYFRLQTTKKGLEWVKKTESLKDVLDRHYPEITKKWMNSASAFSV 639 (658)
Q Consensus 581 fi~~~~~Rl-RF~ye~~~~~~fT~~ql~~I~~~~tl~~vic~~~~~~~~~~~~~~~~f~~ 639 (658)
..+|++ ||||| |+++||++||+||+|+ ||++|||+|. +|+ ..+.+||..
T Consensus 520 ---~~lr~gDRf~ye--n~~~ft~~ql~ei~~~-sla~iic~n~-~i~---~vq~~~F~~ 569 (595)
T 3q9k_A 520 ---QQIRDGDRFWWE--NPGVFTEKQRDSLQKV-SFSRLICDNT-HIT---KVPLHAFQA 569 (595)
T ss_dssp ---HHHHHTCTTCTT--SBTTBCHHHHHHHTTC-CHHHHHHHHS-SCC---EEESSTTSC
T ss_pred ---HHHHhcCCCeec--CCCcCCHHHHHHHHhC-CHHHHHhcCC-Ccc---cccHhhccC
Confidence 356777 99999 5889999999999999 9999999994 675 467888874
No 2
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=100.00 E-value=1.5e-101 Score=871.47 Aligned_cols=434 Identities=22% Similarity=0.304 Sum_probs=360.0
Q ss_pred CCCCCCCCCcccCCCCCCcCcCCCCCCCCCCCcc--cCcccccccccC--CCCCCCCChHHHHHHHhhccCccCCCCchh
Q 038600 80 GVRFNPADYPYRRADGKYNDPFNYTRNKFNSTFN--IGKTQKKKKKKA--GNVLMKPDPMVVATKLLARRNYKDTGKQFN 155 (658)
Q Consensus 80 ~~~~~~~~~~yRt~DGscNNl~~P~~G~a~t~f~--lpp~y~Dg~~~s--~~~~~lP~pR~VS~~l~~~~~~~~~~~~~n 155 (658)
++.|+. ..+|||.||+|| +|+|. +||.|+||+.|. ..+..||+||+||++|+++++++++....|
T Consensus 96 p~~~~~-~~~Yrs~dg~~N----------~t~~~R~lPp~y~dg~~P~g~~~~~~LP~pr~vs~~l~~r~~~~p~~~~~s 164 (587)
T 3nt1_A 96 PPTYNV-HYGYKSWEAFSN----------LSYYTRALPPVADDCPTPMGVKGNKELPDSKEVLEKVLLRREFIPDPQGSN 164 (587)
T ss_dssp SCCBBT-TBSSCCHHHHHC----------TTBCBBSSCCCCTTCSBTTBSSSCSSCCCHHHHHHHHTBCSSCCBCTTCBB
T ss_pred CCCCCC-CCCccccccccC----------CCeeecccCCccccCCCccccCCCCCCCCHHHHHHHHhcCCCcCCCCCCcc
Confidence 345544 369999999999 88999 999999997654 345678999999999999999986555799
Q ss_pred HHHHHHHHHHHhhhccccCCCCccceeCCCCCCCCCCCcccccccccCCCCCCCCCCcccccCCCCccCCccCCCCCHHH
Q 038600 156 MIAASWIQFMIHDWVDHLEDTNQVELIAPNEVADKCPLSSFKFFKTKEVPTGFYEMKTGTINTRTPWWDGSALYGSTMAR 235 (658)
Q Consensus 156 ~l~~~wgQFi~HD~~~~~~~~~~~~i~iP~~~~~~~p~~~m~~~Rs~~~~~~~~~~~~~q~N~~Ts~lD~S~IYGst~~~ 235 (658)
+|+++|||||+|||+.|.. ..| +.+.|++|||||||+||||++++
T Consensus 165 ~l~~~fgQ~i~Hd~f~t~~--------------~~~---------------------~~~~n~~t~~lD~S~IYGss~~~ 209 (587)
T 3nt1_A 165 MMFAFFAQHFTHQFFKTDH--------------KRG---------------------PGFTRGLGHGVDLNHIYGETLDR 209 (587)
T ss_dssp HHHHHHHHHHHTTTCCBCT--------------TTC---------------------TTBBSCTTCSCCCHHHHCSSHHH
T ss_pred HHHHHHHHHHhhhccccCC--------------CCC---------------------CccccCccceeeeccCCCCCHHH
Confidence 9999999999999987621 011 23578999999999999999999
Q ss_pred hhhhccCCCCeeeecc-CC--CcccCC--------------CCCcccCCCC-CcchhHHHHHHHHHHhhhHHHHHHHhhC
Q 038600 236 LQKVRTFKDGKLKISE-DG--LLLHDQ--------------DGIAVTGDVR-NSWAGVSLLEALFIKEHNSVCEAIKEEN 297 (658)
Q Consensus 236 ~~~LR~~~~GkLk~~~-~g--~LP~~~--------------~~~~~aGD~R-N~~pgL~~lhtlf~ReHNria~~L~~~n 297 (658)
+++||++++||||++. +| ++|... ..|+++||.| ||+|+|++|||||+|||||||++|+++|
T Consensus 210 ~~~LR~~~~G~Lk~~~~~g~~~pP~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~pgL~alhtlflREHNriA~~L~~~n 289 (587)
T 3nt1_A 210 QHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEH 289 (587)
T ss_dssp HHHHBCSSTTCBCCEEETTEEECCBHHHHCCCCCCCTTSCGGGCBCCSSTTTTSCHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_pred HHhccCCCCCeeeeecCCCccCCCCCCCcccccccCCCCCcccccccCCcccccChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999864 44 566421 2378999999 9999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHHhhheeeeehhhHhhhcccccccccccccccccccccccccCCCCccccCCCCCCCCCCCCCC
Q 038600 298 PHLSDEELYRFGRLVTSAVIAKVHTIDWTVELLKTDTLDAGMHANWYGLLGKKFKDTFGHVGGAILGGFVGMKRPEIHGV 377 (658)
Q Consensus 298 P~W~DE~LfqeAR~IviA~~Q~I~y~E~LP~lLG~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~g~~~~~~~~v 377 (658)
|+|+||+||||||+||+|+||||||+||||.|||...+ ..|+.. +..++ ..++
T Consensus 290 P~W~DE~LFQeAR~Iv~A~~Q~Ity~EyLP~ilG~~~~-----------------~~~dp~---~~~~~-------~~~~ 342 (587)
T 3nt1_A 290 PEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFK-----------------LKFDPE---LLFNQ-------QFQY 342 (587)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSSC-----------------CCCCGG---GGTTS-------CCCS
T ss_pred CCCcHHHHHHHHHHHHHhhheeeeHHHHHHHhcCcchh-----------------cccCcc---cccCC-------CCCc
Confidence 99999999999999999999999999999999986542 122211 11111 1246
Q ss_pred CCccchhhHhhhhhcccCccccccCCCCCCCCCCCCCCcccccchhHHhcccccccccccchHHHHHHhhhccccccc-c
Q 038600 378 PYSLTEEFVDVYRMHSLLPDQLHLRDLTVPPGPNKSPRLAEKVDMANLIGLKGERTLSEIGFTRQMVSMGHQACGALV-L 456 (658)
Q Consensus 378 ~~sis~EFaaayRfHslip~~~~~~d~~~~~~~~~~~~l~~~~~l~d~~~~~~~~~~~~~g~~~~l~g~~~q~~~~~~-~ 456 (658)
+++|++||++|||+||+||+.+.+.+ .+++|.+.++++. .+.+.|++++++||+.|++++++ .
T Consensus 343 ~~~is~eF~~a~~~Hslip~~~~~~~--------------~~~~l~~~ff~p~--~~~~~gid~llrgl~~q~a~~~~~~ 406 (587)
T 3nt1_A 343 QNRIASEFNTLYHWHPLLPDTFNIED--------------QEYSFKQFLYNNS--ILLEHGLTQFVESFTRQIAGRVAGG 406 (587)
T ss_dssp CCCCBHHHHHHTCCGGGSCSSEEETT--------------EEECHHHHTTCTH--HHHHHHHHHHHHHHHHSBCBCSSSS
T ss_pred CchHHHHHHHHHhccccCCcccccCC--------------CcccHHHHhcCcc--ccchhhHHHHHHHHHHhhhhccccc
Confidence 78999999988888999999987632 2688999999774 35567899999999999999883 3
Q ss_pred ccccHHhhhhhccccCCCCCCCchhHHHHHHHHhhhcCCCcHHHHHHHhCCCCCCCcccccCCHHHHHHHHhHhCCCCCc
Q 038600 457 WNYPRWLRNHVVQDMEGKERPDPVDLAALEVYRDRERKFARYNQLRRALLLIPISKWEDLTDDKEAIQALGEVHGDDVEK 536 (658)
Q Consensus 457 ~n~~~~lr~~~~~~~~G~~~~~~~DL~alnIqRgRDhGlp~Yn~~R~~cgl~~~~sFedL~~d~e~i~~L~~lY~~~vdd 536 (658)
+|++ ..++||+|+|||||||||||+||+||++|||+++++|+||+.+++++++|+++|+ +|||
T Consensus 407 ~n~~----------------~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~~~~~~~~L~~lY~-~~dd 469 (587)
T 3nt1_A 407 RNVP----------------IAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYS-DIDV 469 (587)
T ss_dssp SCBC----------------GGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHHHHHHHHS-SGGG
T ss_pred ccCc----------------hHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCCCHHHHHHHHHHhC-CHhh
Confidence 4432 1378999999999999999999999999999999999999999999999999999 9999
Q ss_pred cccchhcccccccCCceeeEeEEEEeeecCCceehhcchhhHHHHHH-hhhccc-ccEEEecCCCCCCHHH-HHHHhcCC
Q 038600 537 LDLLVGLMAEKKIKGFYYYIFIFRVIIHRSPIFSHLFKNTQFLIFVA-ELHSKL-YYFALVYFRLQTTKKG-LEWVKKTE 613 (658)
Q Consensus 537 VDL~vG~laE~~~~G~~~~~~~~~~i~~~GPt~~cii~~t~f~ifi~-~~~~Rl-RF~ye~~~~~~fT~~q-l~~I~~~~ 613 (658)
||||||+++|++++|+.+ ||||+|| +.|+ +...+ ...+.+ ||| +|++||.+| +++|+|+
T Consensus 470 IDL~vGglaE~~~pG~~v-----------GpTf~ci-~~qf-~l~~~~~~~r~gDrfw----~~~~Ft~~qgl~~I~~~- 531 (587)
T 3nt1_A 470 MELYPALLVEKPRPDAIF-----------GETMVEL-GAPF-SLKGLMGNPICSPQYW----KPSTFGGEVGFKIINTA- 531 (587)
T ss_dssp CCHHHHHHHSCCSTTCSS-----------CHHHHHH-HHHH-HHHHHHTSGGGSTTTS----SGGGGTSHHHHHHHHTC-
T ss_pred eeeecccccccCCCCccH-----------HHHHHHH-HHHH-HHHHHhcCcccCCccc----CcCccChHHHHHHHHHC-
Confidence 999999999999999999 9999999 6653 32322 333444 999 788999877 9999999
Q ss_pred CHHHHHHhhCCCCccccccCCcccccccCC
Q 038600 614 SLKDVLDRHYPEITKKWMNSASAFSVWDSP 643 (658)
Q Consensus 614 tl~~vic~~~~~~~~~~~~~~~~f~~w~~~ 643 (658)
||++|||+|++. ...++|...+..
T Consensus 532 sL~~lic~N~~~------~p~~~F~~p~~~ 555 (587)
T 3nt1_A 532 SIQSLICNNVKG------CPFTSFNVQDPQ 555 (587)
T ss_dssp CHHHHHHHHSTT------CCCCCSBCC---
T ss_pred CHHHHHHhCCCC------CCcceeECCCcc
Confidence 999999999977 356778766553
No 3
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=100.00 E-value=6.3e-101 Score=866.38 Aligned_cols=421 Identities=19% Similarity=0.266 Sum_probs=354.9
Q ss_pred CCCCCCCC--CCCcc--cCcccccccccC--CCCCCCCChHHHHHHHhhccCccCCCCchhHHHHHHHHHHHhhhccccC
Q 038600 101 FNYTRNKF--NSTFN--IGKTQKKKKKKA--GNVLMKPDPMVVATKLLARRNYKDTGKQFNMIAASWIQFMIHDWVDHLE 174 (658)
Q Consensus 101 ~~P~~G~a--~t~f~--lpp~y~Dg~~~s--~~~~~lP~pR~VS~~l~~~~~~~~~~~~~n~l~~~wgQFi~HD~~~~~~ 174 (658)
.+|+||++ +|+|+ +||.|+||..|. ..+..||+||+||++|++++++.+.+..+|+|+++|||||+|||+.+..
T Consensus 104 ~~pswgs~~n~t~~~R~lpp~y~Dg~~p~~~~~~~~LP~pr~vs~~l~~~~~~~p~~~~~s~l~~~fgQfi~HDi~~t~~ 183 (553)
T 1q4g_A 104 DYISWESFSNVSYYTRILPSVPRDCPTPMGTKGKKQLPDAEFLSRRFLLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSG 183 (553)
T ss_dssp SSCCHHHHHCTTBCEESSCCCCTTCSBTTBSSSCSSCCCHHHHHHHHTBCSSCCBCTTCBBHHHHHHHHHHHTTTCCBCT
T ss_pred CCCCCCCCCCCCceeeccCCCccCCCCcccCCCCCCCCCHHHHHHHHhccCCCCCCCCCccHHHHHHHHHHhhhhhcccc
Confidence 67999987 79999 999999996552 2336899999999999998877755788999999999999999987621
Q ss_pred CCCccceeCCCCCCCCCCCcccccccccCCCCCCCCCCcccccCCCCccCCccCCCCCHHHhhhhccCCCCeeeecc-CC
Q 038600 175 DTNQVELIAPNEVADKCPLSSFKFFKTKEVPTGFYEMKTGTINTRTPWWDGSALYGSTMARLQKVRTFKDGKLKISE-DG 253 (658)
Q Consensus 175 ~~~~~~i~iP~~~~~~~p~~~m~~~Rs~~~~~~~~~~~~~q~N~~Ts~lD~S~IYGst~~~~~~LR~~~~GkLk~~~-~g 253 (658)
.+..+++|++|||||||+||||+++++++||++++||||++. +|
T Consensus 184 -----------------------------------~~~~~~~N~~T~~lD~S~vYGs~~~~~~~LR~~~~G~Lk~~~~~g 228 (553)
T 1q4g_A 184 -----------------------------------KMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQMLNG 228 (553)
T ss_dssp -----------------------------------TTCTTBBSCTTCSSSCHHHHCSSHHHHHHHBCSSTTCBCCEEETT
T ss_pred -----------------------------------ccchhhcccccccccccccCCCCHHHHHhhhcCCCCEecccCCCC
Confidence 012478999999999999999999999999999999999875 45
Q ss_pred --CcccC--------------CCCCcccCCCC-CcchhHHHHHHHHHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHHHHh
Q 038600 254 --LLLHD--------------QDGIAVTGDVR-NSWAGVSLLEALFIKEHNSVCEAIKEENPHLSDEELYRFGRLVTSAV 316 (658)
Q Consensus 254 --~LP~~--------------~~~~~~aGD~R-N~~pgL~~lhtlf~ReHNria~~L~~~nP~W~DE~LfqeAR~IviA~ 316 (658)
++|.. ...|+++||.| ||+|+|++|||||+|||||||++|+++||+|+||+||||||+||+|+
T Consensus 229 ~~~~P~~~~~~~~~~~~~~~~~~~cf~~GD~R~ne~p~L~~lhtlflReHNria~~L~~~nP~W~DE~LFQeAR~Iv~a~ 308 (553)
T 1q4g_A 229 EVYPPSVEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGE 308 (553)
T ss_dssp EEECCBTTTSCCCCCCCTTCCGGGSBCCSSTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHH
T ss_pred ccCCCccCCCCCcccCCCCCCchhccccCccccCcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHH
Confidence 66642 12488999999 99999999999999999999999999999999999999999999999
Q ss_pred hheeeeehhhHhhhcccccccccccccccccccccccccCCCCccccCCCCCCCCCCCCCCCCccchhhHhhhhhcccCc
Q 038600 317 IAKVHTIDWTVELLKTDTLDAGMHANWYGLLGKKFKDTFGHVGGAILGGFVGMKRPEIHGVPYSLTEEFVDVYRMHSLLP 396 (658)
Q Consensus 317 ~Q~I~y~E~LP~lLG~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~g~~~~~~~~v~~sis~EFaaayRfHslip 396 (658)
||||||+||||.|+|.... ..++. .+..+. ..+++++|++||++|||+|||||
T Consensus 309 ~Q~I~~~EyLp~ilg~~~~-----------------~~~dp---~~~~~~-------~~~~~~~is~EF~~ayR~Hslip 361 (553)
T 1q4g_A 309 TIKIVIEEYVQQLSGYFLQ-----------------LKFDP---ELLFGA-------QFQYRNRIAMEFNQLYHWHPLMP 361 (553)
T ss_dssp HHHHHHHTHHHHHHCCSSC-----------------CCCCG---GGGTTS-------CCCCCCCCBHHHHHHTCCGGGSC
T ss_pred HHHHHHHHHHHhhcCCccc-----------------cccCc---ccccCC-------CcccCcchhHHHHHHhcccccCC
Confidence 9999999999999986432 11111 011111 12478899999998899999999
Q ss_pred cccccCCCCCCCCCCCCCCcccccchhHHhcccccccccccchHHHHHHhhhcccccc-ccccccHHhhhhhccccCCCC
Q 038600 397 DQLHLRDLTVPPGPNKSPRLAEKVDMANLIGLKGERTLSEIGFTRQMVSMGHQACGAL-VLWNYPRWLRNHVVQDMEGKE 475 (658)
Q Consensus 397 ~~~~~~d~~~~~~~~~~~~l~~~~~l~d~~~~~~~~~~~~~g~~~~l~g~~~q~~~~~-~~~n~~~~lr~~~~~~~~G~~ 475 (658)
+.+.+.+ ..++|.++++++. .+.+.|++++++||+.|+++++ +++|++.
T Consensus 362 ~~~~~~~--------------~~~~l~~~ff~~~--~~~~~g~~~ll~g~~~q~a~~~~~~~n~~~-------------- 411 (553)
T 1q4g_A 362 DSFRVGP--------------QDYSYEQFLFNTS--MLVDYGVEALVDAFSRQPAGRIGGGRNIDH-------------- 411 (553)
T ss_dssp SSEEETT--------------EEECHHHHTTCSS--HHHHHCHHHHHHHHHHSBCBCSSSSSCBCT--------------
T ss_pred cccccCC--------------CcccHHHHhcCch--hhhcccHHHHHHHhhhchhhcccccccCcH--------------
Confidence 9988632 2678999999873 4556789999999999999998 5555421
Q ss_pred CCCchhHHHHHHHHhhhcCCCcHHHHHHHhCCCCCCCcccccCCHHHHHHHHhHhCCCCCccccchhcccccccCCceee
Q 038600 476 RPDPVDLAALEVYRDRERKFARYNQLRRALLLIPISKWEDLTDDKEAIQALGEVHGDDVEKLDLLVGLMAEKKIKGFYYY 555 (658)
Q Consensus 476 ~~~~~DL~alnIqRgRDhGlp~Yn~~R~~cgl~~~~sFedL~~d~e~i~~L~~lY~~~vddVDL~vG~laE~~~~G~~~~ 555 (658)
.++||+|+|||||||||||+||+||++|||+++++|+||+.|++++++|+++|+ +|||||||||+++|++++|+.+
T Consensus 412 --~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~d~~~~~~L~~lY~-~~ddiDL~vG~laE~~~~G~~~- 487 (553)
T 1q4g_A 412 --HILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYG-DIDALEFYPGLLLEKCHPNSIF- 487 (553)
T ss_dssp --TTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHHHHHHHHS-SGGGCCHHHHHHHSCBCTTCSS-
T ss_pred --HHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhcCCHHHHHHHHHHhc-ChhhccccccccccccCCCCCc-
Confidence 367999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred EeEEEEeeecCCceehhcchhhHHHHHHhhhccc-ccEEEecCCCCCCHHHHHHHhc-CCCHHHHHHhhCCCCccccccC
Q 038600 556 IFIFRVIIHRSPIFSHLFKNTQFLIFVAELHSKL-YYFALVYFRLQTTKKGLEWVKK-TESLKDVLDRHYPEITKKWMNS 633 (658)
Q Consensus 556 ~~~~~~i~~~GPt~~cii~~t~f~ifi~~~~~Rl-RF~ye~~~~~~fT~~ql~~I~~-~~tl~~vic~~~~~~~~~~~~~ 633 (658)
||||+|||++|+|+-+ +.-+++ |||| ++++||++|+.+|+| + ||++|||+|++.+ +
T Consensus 488 ----------Gpt~~~ii~~~~~~~l--~~~~~~d~~~~---~~~~ft~~ql~ei~~~~-sla~iic~n~~~~------p 545 (553)
T 1q4g_A 488 ----------GESMIEMGAPFSLKGL--LGNPICSPEYW---KASTFGGEVGFNLVKTA-TLKKLVCLNTKTC------P 545 (553)
T ss_dssp ----------BHHHHHHHHHHHHHHH--HTSGGGSTTTC---SGGGGTSHHHHHHHHTC-CHHHHHHTTSSSC------C
T ss_pred ----------cHHHHHHHHHHHHHHH--hhCcCCCcccc---CCCCcCHHHHHHHHHhC-CHHHHHHHcCCCC------C
Confidence 9999999999766421 111245 7776 588999999999865 6 9999999999733 4
Q ss_pred Cccccc
Q 038600 634 ASAFSV 639 (658)
Q Consensus 634 ~~~f~~ 639 (658)
.++|..
T Consensus 546 ~~~F~~ 551 (553)
T 1q4g_A 546 YVSFHV 551 (553)
T ss_dssp CCCSBC
T ss_pred cccccC
Confidence 566754
No 4
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=9.6e-98 Score=825.03 Aligned_cols=401 Identities=18% Similarity=0.217 Sum_probs=338.2
Q ss_pred ccceeCCCCCCCCCC-CcccccccccCCCCCCCCCCcccccCCCCccCCccCCCCCHHHhhhhccCCC--Ceeeecc---
Q 038600 178 QVELIAPNEVADKCP-LSSFKFFKTKEVPTGFYEMKTGTINTRTPWWDGSALYGSTMARLQKVRTFKD--GKLKISE--- 251 (658)
Q Consensus 178 ~~~i~iP~~~~~~~p-~~~m~~~Rs~~~~~~~~~~~~~q~N~~Ts~lD~S~IYGst~~~~~~LR~~~~--GkLk~~~--- 251 (658)
|.||.||..++---+ ..||+|.||.+++......+++|+|++|||||||+||||+++++++||++++ ||||++.
T Consensus 13 C~pI~ip~~Dp~~~~~~~cl~f~Rs~~~~~~g~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~~~G~Lk~~~~~~ 92 (466)
T 1d2v_C 13 CFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQ 92 (466)
T ss_dssp BCCEECCTTCSSCCCTTCEECCBCCCBSSTTCSSSCCCBEECSCSSSSCHHHHCSSHHHHHHHBCCSSSSCCBCCCSSCC
T ss_pred CcceeCCCCCCCcCCCCcceeeecCccccCCCCCCHHHHhhccccccccccCcCCCHHHHHHHhccCCCCCeeccCCccC
Confidence 467788765532212 3799999999875433223579999999999999999999999999999987 9999864
Q ss_pred -CC--CcccCC--------------CCCcccCCCC-CcchhHHHHHHHHHHhhhHHHHHHHhhCCCCCcHHHHHHHHHHH
Q 038600 252 -DG--LLLHDQ--------------DGIAVTGDVR-NSWAGVSLLEALFIKEHNSVCEAIKEENPHLSDEELYRFGRLVT 313 (658)
Q Consensus 252 -~g--~LP~~~--------------~~~~~aGD~R-N~~pgL~~lhtlf~ReHNria~~L~~~nP~W~DE~LfqeAR~Iv 313 (658)
+| +||.+. ..|+++||.| ||+|+|++|||||+|||||||++|+++||+|+||+||||||+||
T Consensus 93 ~~g~~~lP~~~~~~~~c~~~~~~~~~~cf~~GD~R~ne~p~l~~lhtlflReHNria~~L~~~nP~W~DE~LFqeAR~Iv 172 (466)
T 1d2v_C 93 DNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIV 172 (466)
T ss_dssp BTTBCCCCBCCCTTCSGGGGCTTTCCCCBCCSSTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHH
T ss_pred CCCCcCCCCCCCCCCcccccccCCCcchhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHH
Confidence 34 788642 1378999999 99999999999999999999999999999999999999999999
Q ss_pred HHhhheeeeehhhHhhhcccccccccccccccccccccccccCCCCccccCCCCCCCCCCCCCCCCccchhhHhhhhh-c
Q 038600 314 SAVIAKVHTIDWTVELLKTDTLDAGMHANWYGLLGKKFKDTFGHVGGAILGGFVGMKRPEIHGVPYSLTEEFVDVYRM-H 392 (658)
Q Consensus 314 iA~~Q~I~y~E~LP~lLG~~~~~~~m~~nw~gl~g~~~~~~~g~~~~~~~~g~~g~~~~~~~~v~~sis~EFaaayRf-H 392 (658)
+|+||||||+||||.|||.+.+... .+.|.| |+++++|+|++||+||||| |
T Consensus 173 ~a~~Q~I~~~EyLp~ilG~~~~~~~------------------------~~~~~g----y~~~v~p~isnEF~aafRfgH 224 (466)
T 1d2v_C 173 GAMVQIITYRDYLPLVLGPTAMRKY------------------------LPTYRS----YNDSVDPRIANVFTNAFRYGH 224 (466)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHH------------------------SCCCCC----CCTTSCCSCBHHHHHHGGGGG
T ss_pred HHHHHHHhHHHHHHHHhCchhhhhc------------------------CCcccC----CCCCCCCchhHHHHHHHhccc
Confidence 9999999999999999998765420 112333 7789999999999889999 9
Q ss_pred ccCccccccCCCCCCCCCCCCCCcccccchhHHhcccccccccccchHHHHHHhhhcccccc-ccccccHHhhhhhcccc
Q 038600 393 SLLPDQLHLRDLTVPPGPNKSPRLAEKVDMANLIGLKGERTLSEIGFTRQMVSMGHQACGAL-VLWNYPRWLRNHVVQDM 471 (658)
Q Consensus 393 slip~~~~~~d~~~~~~~~~~~~l~~~~~l~d~~~~~~~~~~~~~g~~~~l~g~~~q~~~~~-~~~n~~~~lr~~~~~~~ 471 (658)
||||+.+.+.+.+. ..... ...++|.+.++++.. .+.+.|++.+++||+.|+++.. .+..+.+.|++.+|+.+
T Consensus 225 sli~~~~~~~~~~~--~~~~~---~~~~~l~~~~f~~~~-~~~~~g~d~~lrgl~~q~a~~~~~d~~l~~~l~~~lf~~~ 298 (466)
T 1d2v_C 225 TLIQPFMFRLDNRY--QPMEP---NPRVPLSRVFFASWR-VVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQV 298 (466)
T ss_dssp GGCCSEEECBCTTS--SBCSS---CSEEEGGGTTTCHHH-HHHTTCHHHHHHHHHHSEEECCBTTBCSCHHHHTCBTGGG
T ss_pred ccCchhhccccccc--cccCC---CCceeHHHHhcChHH-HhhccCchHHHHHHhhCccccccCchhhhHHHHHHhhccc
Confidence 99999999865321 11110 236889999888753 3456789999999999998754 35678899999887543
Q ss_pred CCCCCCCchhHHHHHHHHhhhcCCCcHHHHHHHhCCCCCCCccccc---CCHHHHHHHHhHhCCCCCccccchhcccccc
Q 038600 472 EGKERPDPVDLAALEVYRDRERKFARYNQLRRALLLIPISKWEDLT---DDKEAIQALGEVHGDDVEKLDLLVGLMAEKK 548 (658)
Q Consensus 472 ~G~~~~~~~DL~alnIqRgRDhGlp~Yn~~R~~cgl~~~~sFedL~---~d~e~i~~L~~lY~~~vddVDL~vG~laE~~ 548 (658)
. ..++||+|+|||||||||||+||+||++|||++++||+||+ .|++++++|+++|+ +|||||||||+++|++
T Consensus 299 ~----~~~~DL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~~~~d~~~~~~L~~lY~-~~d~vDL~vG~laE~~ 373 (466)
T 1d2v_C 299 M----RIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLARKLMEQYG-TPNNIDIWMGGVSEPL 373 (466)
T ss_dssp S----SSCBCHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHHHHHS-SGGGSCHHHHHHHSCC
T ss_pred C----ccchhHHHHHHHHHHHcCCCCHHHHHHHcCCCCCCCHHHHhhccCCHHHHHHHHHHhC-Cccccceeeccccccc
Confidence 3 35899999999999999999999999999999999999999 79999999999999 9999999999999999
Q ss_pred cCCceeeEeEEEEeeecCCceehhcchhhHHHHHHhhhccc-ccEEEecCCCCCCHHHHHHHhcCCCHHHHHHhhCCCCc
Q 038600 549 IKGFYYYIFIFRVIIHRSPIFSHLFKNTQFLIFVAELHSKL-YYFALVYFRLQTTKKGLEWVKKTESLKDVLDRHYPEIT 627 (658)
Q Consensus 549 ~~G~~~~~~~~~~i~~~GPt~~cii~~t~f~ifi~~~~~Rl-RF~ye~~~~~~fT~~ql~~I~~~~tl~~vic~~~~~~~ 627 (658)
++|+.+ ||||+|||++|| .++|++ ||||| ||++||++|++||+|+ ||++|||+|+ +++
T Consensus 374 ~~G~~~-----------Gptf~~ii~~qf------~rLr~gDRf~ye--n~~~ft~~ql~ei~~~-sl~~iic~n~-~~~ 432 (466)
T 1d2v_C 374 KRKGRV-----------GPLLACIIGTQF------RKLRDGDRFWWE--NEGVFSMQQRQALAQI-SLPRIICDNT-GIT 432 (466)
T ss_dssp CTTCSS-----------CHHHHHHHHHHH------HHHHHTCTTCTT--STTTSCHHHHHHHTTC-CHHHHHHHHS-SCC
T ss_pred CCCCCC-----------CHHHHHHHHHHH------HHHHhcCccccc--CCCcccchhhHHHHhC-CHHHHHHhcC-CCc
Confidence 999999 999999999974 256777 99998 6899999999999999 9999999999 665
Q ss_pred cccccCCc-cccccc
Q 038600 628 KKWMNSAS-AFSVWD 641 (658)
Q Consensus 628 ~~~~~~~~-~f~~w~ 641 (658)
..+.+ ||..-.
T Consensus 433 ---~iq~~~~F~~~~ 444 (466)
T 1d2v_C 433 ---TVSKNNIFMSNS 444 (466)
T ss_dssp ---EEECSCTTTCCS
T ss_pred ---ccCCCccccCCC
Confidence 34555 997544
No 5
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=99.93 E-value=8.7e-27 Score=207.20 Aligned_cols=87 Identities=15% Similarity=0.101 Sum_probs=76.7
Q ss_pred CCcccCCCCCCcCcCCCCCCCCCCCcc--cCcccccccc-cC-------CCCCCCCChHHHHHHHhhccC-ccCCCCchh
Q 038600 87 DYPYRRADGKYNDPFNYTRNKFNSTFN--IGKTQKKKKK-KA-------GNVLMKPDPMVVATKLLARRN-YKDTGKQFN 155 (658)
Q Consensus 87 ~~~yRt~DGscNNl~~P~~G~a~t~f~--lpp~y~Dg~~-~s-------~~~~~lP~pR~VS~~l~~~~~-~~~~~~~~n 155 (658)
..+|||+||+|||+.||.||+|+++|. +||.|+||++ |. .+|..||+||+||++|+++.+ ...++..+|
T Consensus 4 ~~~yRt~DG~cNNl~~P~~G~a~t~f~R~lpp~Y~DG~~~p~~~~~~~~~~g~~lP~pR~VS~~l~~~~~~~~~~~~~~t 83 (104)
T 1d2v_A 4 QDKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALARAVSNEIVRFPTDQLTPDQERS 83 (104)
T ss_dssp CCSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCHHHHHHHHTCCCGGGCCEEEEEE
T ss_pred CCCccCCCCCccCCCCCccCcCCCccccccCcccccCcccccccccccccCCCcCCCHHHHHHHHHhcccccCCCCCchH
Confidence 579999999999999999999999999 9999999985 32 257889999999999998765 223578899
Q ss_pred HHHHHHHHHHHhhhcccc
Q 038600 156 MIAASWIQFMIHDWVDHL 173 (658)
Q Consensus 156 ~l~~~wgQFi~HD~~~~~ 173 (658)
+|+|+|||||+|||++++
T Consensus 84 ~~~~~wgQfi~HDl~~t~ 101 (104)
T 1d2v_A 84 LMFMQWGQLLDHDLDFTP 101 (104)
T ss_dssp HHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhhHhhcC
Confidence 999999999999999875
No 6
>1rpb_A Tricyclic peptide RP 71955; HIV replication inhibitor, replication inhibitor; NMR {Actinomycete SP9440} SCOP: j.24.1.1 PDB: 1rpc_A
Probab=16.99 E-value=42 Score=21.03 Aligned_cols=7 Identities=43% Similarity=0.411 Sum_probs=5.7
Q ss_pred CCCcCcC
Q 038600 95 GKYNDPF 101 (658)
Q Consensus 95 GscNNl~ 101 (658)
|||||..
T Consensus 5 gscn~fa 11 (26)
T 1rpb_A 5 GSCNDFA 11 (26)
T ss_dssp SSBCSSS
T ss_pred ecccCcC
Confidence 8899865
No 7
>3lqv_P Splicing factor 3B subunit 1; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} PDB: 2f9d_P 2f9j_P
Probab=13.44 E-value=1.2e+02 Score=21.49 Aligned_cols=18 Identities=50% Similarity=0.501 Sum_probs=14.6
Q ss_pred HHHHHHHhhCCCCCcHHH
Q 038600 288 SVCEAIKEENPHLSDEEL 305 (658)
Q Consensus 288 ria~~L~~~nP~W~DE~L 305 (658)
++-.++...|--|+||+|
T Consensus 11 ~~~~ei~~RNrpltDEeL 28 (39)
T 3lqv_P 11 RWEREIDERNRPLSDEEL 28 (39)
T ss_dssp HHHHHHHHTTCCCCHHHH
T ss_pred HhhccchhhcCCCCHHHH
Confidence 455677889999999987
No 8
>1b1v_A PSP1, protein (plasmatocyte-spreading peptide); insect cytokine, EGF-like; NMR {Synthetic} SCOP: j.8.1.1 PDB: 1b5n_A 1bqf_A 2eqh_A 2dj9_A 1hrl_A 1v28_A 2djc_A 1irr_A
Probab=12.82 E-value=68 Score=20.25 Aligned_cols=12 Identities=33% Similarity=0.379 Sum_probs=9.4
Q ss_pred CCcccCCCCCCc
Q 038600 87 DYPYRRADGKYN 98 (658)
Q Consensus 87 ~~~yRt~DGscN 98 (658)
..--||+||.|-
T Consensus 9 ~gy~rtadgrck 20 (26)
T 1b1v_A 9 AGYMRTADGRCK 20 (26)
T ss_dssp SSCEECSSCCEE
T ss_pred ccceECCCCccc
Confidence 345699999995
No 9
>2eqq_A GBP, growth-blocking peptide, long form; cytokine; NMR {Mythimna separata} SCOP: j.8.1.1 PDB: 2eqt_A
Probab=11.07 E-value=76 Score=20.36 Aligned_cols=12 Identities=25% Similarity=0.321 Sum_probs=9.4
Q ss_pred CCcccCCCCCCc
Q 038600 87 DYPYRRADGKYN 98 (658)
Q Consensus 87 ~~~yRt~DGscN 98 (658)
..--||+||.|-
T Consensus 9 ~gy~rtadgrck 20 (28)
T 2eqq_A 9 AGYMRTPDGRCK 20 (28)
T ss_dssp TTEEECTTCCEE
T ss_pred ccceECCCCccC
Confidence 445699999995
No 10
>2ju0_B Phosphatidylinositol 4-kinase PIK1; EF-hand, calcium, ptdins 4-kinase, frequenin, yeast, lipoprotein, membrane, myristate, nucleus; NMR {Saccharomyces cerevisiae}
Probab=9.58 E-value=1.1e+02 Score=23.21 Aligned_cols=18 Identities=11% Similarity=0.041 Sum_probs=14.1
Q ss_pred HHHHHHHHHHhhheeeeeh
Q 038600 306 YRFGRLVTSAVIAKVHTID 324 (658)
Q Consensus 306 fqeAR~IviA~~Q~I~y~E 324 (658)
||.+|++ +=.+|+|.++-
T Consensus 5 Fqv~Rr~-~NklQ~ilFn~ 22 (52)
T 2ju0_B 5 FQVARRV-LNNLQTNLFNT 22 (52)
T ss_dssp THHHHHH-HHHHTCCSSCS
T ss_pred hHHHHHH-HHHHHHHHhCC
Confidence 8999996 56788887764
Done!