Citrus Sinensis ID: 038603
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 256 | ||||||
| 225451852 | 372 | PREDICTED: GDSL esterase/lipase 7-like [ | 0.933 | 0.642 | 0.442 | 7e-61 | |
| 90657594 | 363 | hypothetical protein [Cleome spinosa] | 0.949 | 0.669 | 0.418 | 6e-58 | |
| 298204434 | 332 | unnamed protein product [Vitis vinifera] | 0.882 | 0.680 | 0.436 | 1e-56 | |
| 297811709 | 364 | GDSL-motif lipase 7 [Arabidopsis lyrata | 0.960 | 0.675 | 0.396 | 5e-55 | |
| 18417760 | 364 | GDSL esterase/lipase 7 [Arabidopsis thal | 0.937 | 0.659 | 0.400 | 6e-54 | |
| 147862858 | 413 | hypothetical protein VITISV_035686 [Viti | 0.679 | 0.421 | 0.526 | 8e-47 | |
| 9755617 | 366 | putative protein [Arabidopsis thaliana] | 0.941 | 0.658 | 0.374 | 4e-45 | |
| 359493337 | 374 | PREDICTED: GDSL esterase/lipase At1g7169 | 0.925 | 0.633 | 0.363 | 3e-36 | |
| 224135735 | 373 | predicted protein [Populus trichocarpa] | 0.949 | 0.651 | 0.359 | 6e-36 | |
| 356515422 | 1093 | PREDICTED: cellulose synthase-like prote | 0.894 | 0.209 | 0.344 | 3e-35 |
| >gi|225451852|ref|XP_002278481.1| PREDICTED: GDSL esterase/lipase 7-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/314 (44%), Positives = 177/314 (56%), Gaps = 75/314 (23%)
Query: 7 FAHGQASNTSLTPAMFIFGETMINSENNNSIMTIARENYRHPHGIDFGYPTDRFCNGIS- 65
AHGQA+ +TPAMFIFG+++I++ NNN I T+AR NY P+GIDFG PT RFCNG++
Sbjct: 28 LAHGQAT-APVTPAMFIFGDSLIDNGNNNFIPTMARANY-FPYGIDFGLPTGRFCNGLTV 85
Query: 66 -----------------------------------AAGCADHN----------------- 73
AAG D
Sbjct: 86 VDYGAHHLGLPLIPPFLSPLSKGKKILRGLNYASAAAGILDETGQHYGGRTPFNGQISQF 145
Query: 74 ------HVQPIFQKPTDLTQYIAKSLFLISIGSNDYINNYLQPSTYASSQIYSGEGFAVL 127
+ P+ P++LT Y+AKS+FLI+IGSNDYINNYL P Y SS +YSGE +A L
Sbjct: 146 AITTSQQLPPLLGTPSELTNYLAKSVFLINIGSNDYINNYLLPRRYISSHVYSGEVYADL 205
Query: 128 IINNFSEQLSKLYILGVRKTVCARLGPLGCIPSKYLWQAATTAVIEQVNNLVTIFNS--- 184
+INN S QLSKLY LG RK V +GPLGCIPS+ ++ +++VNNLVT+FNS
Sbjct: 206 LINNLSNQLSKLYRLGARKMVLVGIGPLGCIPSQLSMVSSNNGCVDRVNNLVTLFNSRLI 265
Query: 185 -----ISFSSPFVFFQF-----IHTEIFQDSASV-FLVTNKACCGNVRYGGHLTCLPLQQ 233
++ S P FF + I + + +D + F V N ACCGN RYGG LTCLPL+Q
Sbjct: 266 QLTSTLNASLPGSFFVYQNIYNIFSNMVRDPSKYGFTVPNSACCGNGRYGGDLTCLPLEQ 325
Query: 234 PWANRNQYIFWDPF 247
P NR+QYIFWD F
Sbjct: 326 PCKNRDQYIFWDSF 339
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|90657594|gb|ABD96893.1| hypothetical protein [Cleome spinosa] | Back alignment and taxonomy information |
|---|
| >gi|298204434|emb|CBI16914.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297811709|ref|XP_002873738.1| GDSL-motif lipase 7 [Arabidopsis lyrata subsp. lyrata] gi|297319575|gb|EFH49997.1| GDSL-motif lipase 7 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18417760|ref|NP_568318.1| GDSL esterase/lipase 7 [Arabidopsis thaliana] gi|75155889|sp|Q8LFJ9.1|GLIP7_ARATH RecName: Full=GDSL esterase/lipase 7; AltName: Full=Extracellular lipase 7; Flags: Precursor gi|21537027|gb|AAM61368.1| unknown [Arabidopsis thaliana] gi|332004813|gb|AED92196.1| GDSL esterase/lipase 7 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|147862858|emb|CAN83203.1| hypothetical protein VITISV_035686 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|9755617|emb|CAC01771.1| putative protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|359493337|ref|XP_002278219.2| PREDICTED: GDSL esterase/lipase At1g71691-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224135735|ref|XP_002327291.1| predicted protein [Populus trichocarpa] gi|222835661|gb|EEE74096.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356515422|ref|XP_003526399.1| PREDICTED: cellulose synthase-like protein G1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 256 | ||||||
| TAIR|locus:2143156 | 364 | GLIP7 "AT5G15720" [Arabidopsis | 0.660 | 0.464 | 0.497 | 6.1e-58 | |
| TAIR|locus:2824531 | 384 | AT1G71691 "AT1G71691" [Arabido | 0.613 | 0.408 | 0.398 | 1.1e-40 | |
| TAIR|locus:2032333 | 374 | AT1G71250 "AT1G71250" [Arabido | 0.648 | 0.443 | 0.386 | 5.8e-40 | |
| TAIR|locus:505006166 | 370 | AT1G33811 "AT1G33811" [Arabido | 0.394 | 0.272 | 0.361 | 3.7e-39 | |
| TAIR|locus:2013663 | 363 | AT1G29670 "AT1G29670" [Arabido | 0.644 | 0.454 | 0.346 | 1.7e-38 | |
| TAIR|locus:2171948 | 362 | AT5G45670 "AT5G45670" [Arabido | 0.746 | 0.527 | 0.358 | 3.5e-38 | |
| TAIR|locus:2013658 | 364 | AT1G29660 "AT1G29660" [Arabido | 0.621 | 0.436 | 0.386 | 1.5e-37 | |
| TAIR|locus:2159547 | 385 | AT5G08460 "AT5G08460" [Arabido | 0.382 | 0.254 | 0.484 | 5.6e-33 | |
| TAIR|locus:2117763 | 367 | AT4G28780 "AT4G28780" [Arabido | 0.640 | 0.446 | 0.320 | 1.3e-28 | |
| TAIR|locus:2059098 | 349 | AT2G19060 [Arabidopsis thalian | 0.605 | 0.444 | 0.315 | 7.2e-28 |
| TAIR|locus:2143156 GLIP7 "AT5G15720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 444 (161.4 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 92/185 (49%), Positives = 120/185 (64%)
Query: 79 FQKPTDLTQYIAKSLFLISIGSNDYINNYLQPSTYASSQIYSGEGFAVLIINNFSEQLSK 138
FQ P DL +Y+AKS+ I+IGSNDYINNYL P Y++SQ YSGE +A L+I S Q+S+
Sbjct: 147 FQNPADLRKYLAKSIIGINIGSNDYINNYLMPERYSTSQTYSGEDYADLLIKTLSAQISR 206
Query: 139 LYILGVRKTVCARLGPLGCIPSKYLWQAA--TTAVIEQVNNLVTIFNS--------ISFS 188
LY LG RK V A GPLGCIPS+ T+ + ++NN+V++FNS ++ +
Sbjct: 207 LYNLGARKMVLAGSGPLGCIPSQLSMVTGNNTSGCVTKINNMVSMFNSRLKDLANTLNTT 266
Query: 189 SP---FVF---FQFIHTEIFQDSASVFLVTNKACCGNVRYGGHLTCLPLQQPWANRNQYI 242
P FV+ F H + S +V+N+ACCGN RYGG LTCLPLQQP +RNQY+
Sbjct: 267 LPGSFFVYQNVFDLFHDMVVNPSRYGLVVSNEACCGNGRYGGALTCLPLQQPCLDRNQYV 326
Query: 243 FWDPF 247
FWD F
Sbjct: 327 FWDAF 331
|
|
| TAIR|locus:2824531 AT1G71691 "AT1G71691" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2032333 AT1G71250 "AT1G71250" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:505006166 AT1G33811 "AT1G33811" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2013663 AT1G29670 "AT1G29670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171948 AT5G45670 "AT5G45670" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2013658 AT1G29660 "AT1G29660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2159547 AT5G08460 "AT5G08460" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117763 AT4G28780 "AT4G28780" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2059098 AT2G19060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 256 | |||
| cd01837 | 315 | cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase | 4e-35 | |
| PLN03156 | 351 | PLN03156, PLN03156, GDSL esterase/lipase; Provisio | 4e-13 | |
| PLN03156 | 351 | PLN03156, PLN03156, GDSL esterase/lipase; Provisio | 9e-09 | |
| cd01846 | 270 | cd01846, fatty_acyltransferase_like, Fatty acyltra | 4e-05 | |
| pfam00657 | 219 | pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydro | 3e-04 |
| >gnl|CDD|238875 cd01837, SGNH_plant_lipase_like, SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 4e-35
Identities = 85/302 (28%), Positives = 128/302 (42%), Gaps = 78/302 (25%)
Query: 19 PAMFIFGETMINSENNNSIMTIARENYRHPHGI-----------------DF-----GYP 56
PA+F+FG++++++ NNN + T+A+ N+ P+GI DF G P
Sbjct: 1 PALFVFGDSLVDTGNNNYLPTLAKANF-PPYGIDFPGRPTGRFSNGRLIIDFIAEALGLP 59
Query: 57 -----------TDRFCNGI---SAAGCAD---HNHVQPI--------FQK---------- 81
+ F G+ S I F++
Sbjct: 60 LLPPPYLSPNGSSDFLTGVNFASGGAGILDSTGFLGSVISLSVQLEYFKEYKERLRALVG 119
Query: 82 PTDLTQYIAKSLFLISIGSNDYINNYLQPSTYASSQIYSGEGFAVLIINNFSEQLSKLYI 141
++KSLFLISIGSNDY+NNY T Y E + +++N S + +LY
Sbjct: 120 EEAAADILSKSLFLISIGSNDYLNNYFANPTR----QYEVEAYVPFLVSNISSAIKRLYD 175
Query: 142 LGVRKTVCARLGPLGCIPS-KYLWQAATTAVIEQVNNLVTIFNS--------ISFSSP-- 190
LG RK V LGPLGC+PS + L+ +E++N L +FN+ + P
Sbjct: 176 LGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELPGA 235
Query: 191 -FVFFQF--IHTEIFQDSASV-FLVTNKACCGNVRYGGHLTCLPL-QQPWANRNQYIFWD 245
FV+ ++ Q+ A F T KACCG G L C P + ++Y+FWD
Sbjct: 236 KFVYADIYNALLDLIQNPAKYGFENTLKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFWD 295
Query: 246 PF 247
Sbjct: 296 GV 297
|
The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Length = 315 |
| >gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional | Back alignment and domain information |
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| >gnl|CDD|178701 PLN03156, PLN03156, GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238882 cd01846, fatty_acyltransferase_like, Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >gnl|CDD|216048 pfam00657, Lipase_GDSL, GDSL-like Lipase/Acylhydrolase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 256 | |||
| PLN03156 | 351 | GDSL esterase/lipase; Provisional | 100.0 | |
| cd01837 | 315 | SGNH_plant_lipase_like SGNH_plant_lipase_like, a p | 100.0 | |
| cd01847 | 281 | Triacylglycerol_lipase_like Triacylglycerol lipase | 100.0 | |
| PRK15381 | 408 | pathogenicity island 2 effector protein SseJ; Prov | 100.0 | |
| cd01846 | 270 | fatty_acyltransferase_like Fatty acyltransferase-l | 100.0 | |
| COG3240 | 370 | Phospholipase/lecithinase/hemolysin [Lipid metabol | 99.95 | |
| PF00657 | 234 | Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; Inter | 99.86 | |
| PF13472 | 179 | Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase fami | 98.09 | |
| cd00229 | 187 | SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, | 98.08 | |
| cd01821 | 198 | Rhamnogalacturan_acetylesterase_like Rhamnogalactu | 98.05 | |
| cd01836 | 191 | FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, Fee | 98.01 | |
| cd01830 | 204 | XynE_like SGNH_hydrolase subfamily, similar to the | 97.88 | |
| cd01829 | 200 | SGNH_hydrolase_peri2 SGNH_peri2; putative periplas | 97.88 | |
| cd01841 | 174 | NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfa | 97.86 | |
| cd01834 | 191 | SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SG | 97.86 | |
| cd01833 | 157 | XynB_like SGNH_hydrolase subfamily, similar to Rum | 97.76 | |
| cd04506 | 204 | SGNH_hydrolase_YpmR_like Members of the SGNH-hydro | 97.66 | |
| cd01839 | 208 | SGNH_arylesterase_like SGNH_hydrolase subfamily, s | 97.65 | |
| cd01823 | 259 | SEST_like SEST_like. A family of secreted SGNH-hyd | 97.64 | |
| cd01828 | 169 | sialate_O-acetylesterase_like2 sialate_O-acetylest | 97.6 | |
| cd01820 | 214 | PAF_acetylesterase_like PAF_acetylhydrolase (PAF-A | 97.54 | |
| cd01838 | 199 | Isoamyl_acetate_hydrolase_like Isoamyl-acetate hyd | 97.49 | |
| cd04502 | 171 | SGNH_hydrolase_like_7 Members of the SGNH-hydrolas | 97.44 | |
| cd04501 | 183 | SGNH_hydrolase_like_4 Members of the SGNH-hydrolas | 97.42 | |
| cd01844 | 177 | SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SG | 97.38 | |
| cd01832 | 185 | SGNH_hydrolase_like_1 Members of the SGNH-hydrolas | 97.25 | |
| cd01826 | 305 | acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase l | 97.22 | |
| cd01825 | 189 | SGNH_hydrolase_peri1 SGNH_peri1; putative periplas | 97.07 | |
| cd01824 | 288 | Phospholipase_B_like Phospholipase-B_like. This su | 96.93 | |
| cd01827 | 188 | sialate_O-acetylesterase_like1 sialate O-acetylest | 96.75 | |
| cd01840 | 150 | SGNH_hydrolase_yrhL_like yrhL-like subfamily of SG | 96.67 | |
| cd01835 | 193 | SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SG | 96.63 | |
| cd01831 | 169 | Endoglucanase_E_like Endoglucanase E-like members | 96.32 | |
| cd01822 | 177 | Lysophospholipase_L1_like Lysophospholipase L1-lik | 95.6 | |
| KOG3035 | 245 | consensus Isoamyl acetate-hydrolyzing esterase [Li | 94.64 | |
| COG2755 | 216 | TesA Lysophospholipase L1 and related esterases [A | 89.79 | |
| PRK10528 | 191 | multifunctional acyl-CoA thioesterase I and protea | 86.34 |
| >PLN03156 GDSL esterase/lipase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=448.49 Aligned_cols=241 Identities=30% Similarity=0.558 Sum_probs=198.4
Q ss_pred ccCCCCCCeEEEcCCCccccCCCCCchhhhhhcCCCCCCCCC-C-CCCCCCCCCcc------------------------
Q 038603 12 ASNTSLTPAMFIFGETMINSENNNSIMTIARENYRHPHGIDF-G-YPTDRFCNGIS------------------------ 65 (256)
Q Consensus 12 ~~~~~~~~~l~vFGDSl~D~Gn~~~~~~~~~~~~~~PyG~~~-~-~ptGRfSnG~~------------------------ 65 (256)
++..+.+++|||||||++|+||++++.+..++++ ||||++| + +|||||||||+
T Consensus 21 ~~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~-~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~ 99 (351)
T PLN03156 21 AETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNF-EPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYN 99 (351)
T ss_pred hcccCCCCEEEEecCcCccCCCccccccccccCC-CCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccC
Confidence 4456679999999999999999998877678888 9999999 4 79999999999
Q ss_pred -------------ccee----------cc-HHhHhhh------hc---CchhHhhhccCceEEEEeccchhhhhhcCCCc
Q 038603 66 -------------AAGC----------AD-HNHVQPI------FQ---KPTDLTQYIAKSLFLISIGSNDYINNYLQPST 112 (256)
Q Consensus 66 -------------gaG~----------i~-~~~~~~~------~~---g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~ 112 (256)
|+|+ ++ ..|++.+ +. |...+++.++++||+||||+|||+.+|+..+
T Consensus 100 ~~~~~~GvNFA~agag~~~~~~~~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~- 178 (351)
T PLN03156 100 ISDFATGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFP- 178 (351)
T ss_pred chhhcccceeecCCccccCCCccccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhccc-
Confidence 1121 12 1233221 10 3344567789999999999999986665321
Q ss_pred cCCccccchhhHHHHHHHHHHHHHHHHHHcCCceeeeccCCCCCCccchhhcc--ccccchhHHHhHHHHHHHHhc----
Q 038603 113 YASSQIYSGEGFAVLIINNFSEQLSKLYILGVRKTVCARLGPLGCIPSKYLWQ--AATTAVIEQVNNLVTIFNSIS---- 186 (256)
Q Consensus 113 ~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~GARk~vv~nlpplgc~P~~~~~~--~~~~~c~~~~n~~~~~~N~~L---- 186 (256)
......+++++++.+++.+.+.|++||++|||||+|+|+||+||+|. .+.. .+..+|.+.+|++++.||++|
T Consensus 179 -~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~-~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l 256 (351)
T PLN03156 179 -GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPL-ERTTNLMGGSECVEEYNDVALEFNGKLEKLV 256 (351)
T ss_pred -cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHH-HHhhcCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 11223457889999999999999999999999999999999999998 7654 234589999999999999999
Q ss_pred --c--cCCCceEEEEcC-ccccc-----cccCccccCcccccCcccCCcccCCCCC-CCCCCCCCceEeCCCCcCccccC
Q 038603 187 --F--SSPFVFFQFIHT-EIFQD-----SASVFLVTNKACCGNVRYGGHLTCLPLQ-QPWANRNQYIFWDPFIQRKLPMQ 255 (256)
Q Consensus 187 --L--~~~~~~i~~~D~-~~~~~-----~~yGf~~~~~aCcg~g~~~~~~~C~~~~-~~C~~~~~y~fwD~~HPT~~~h~ 255 (256)
| ++|+++|+++|+ +++++ ++|||++++++||+.|.++....|++.. .+|++|++|+|||++||||++|+
T Consensus 257 ~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~ 336 (351)
T PLN03156 257 TKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATGMFEMGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQ 336 (351)
T ss_pred HHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCCCCCCccccCCCCCCccCCccceEEecCCCchHHHHH
Confidence 3 689999999999 98877 9999999999999998888788898655 58999999999999999999997
Q ss_pred C
Q 038603 256 L 256 (256)
Q Consensus 256 l 256 (256)
+
T Consensus 337 ~ 337 (351)
T PLN03156 337 I 337 (351)
T ss_pred H
Confidence 5
|
|
| >cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >PRK15381 pathogenicity island 2 effector protein SseJ; Provisional | Back alignment and domain information |
|---|
| >cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only] | Back alignment and domain information |
|---|
| >PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified [] | Back alignment and domain information |
|---|
| >PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A | Back alignment and domain information |
|---|
| >cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases | Back alignment and domain information |
|---|
| >cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE | Back alignment and domain information |
|---|
| >cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB | Back alignment and domain information |
|---|
| >cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A | Back alignment and domain information |
|---|
| >cd01823 SEST_like SEST_like | Back alignment and domain information |
|---|
| >cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases | Back alignment and domain information |
|---|
| >cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins | Back alignment and domain information |
|---|
| >cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family | Back alignment and domain information |
|---|
| >cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01824 Phospholipase_B_like Phospholipase-B_like | Back alignment and domain information |
|---|
| >cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases | Back alignment and domain information |
|---|
| >cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
| >cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans | Back alignment and domain information |
|---|
| >cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases | Back alignment and domain information |
|---|
| >KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 256 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 3e-17 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} Length = 632 | Back alignment and structure |
|---|
Score = 80.2 bits (197), Expect = 3e-17
Identities = 24/170 (14%), Positives = 48/170 (28%), Gaps = 27/170 (15%)
Query: 89 IAKSLFLISIGSNDYINNYLQPSTYASSQIYSGEGFAVLIINNFSEQLSKLYILGVRKTV 148
+L+ I+ G ND++ + A + + L G R V
Sbjct: 145 DPNALYYITGGGNDFLQGRILNDVQAQQ-----------AAGRLVDSVQALQQAGARYIV 193
Query: 149 CARLGPLGCIPSKYLWQAATTAVIEQVNNLVTIFNSISFSS--------PFVFFQFIHTE 200
L LG P+ + + L FN+ + + + E
Sbjct: 194 VWLLPDLGLTPA-----TFGGPLQPFASQLSGTFNAELTAQLSQAGANVIPLNIPLLLKE 248
Query: 201 IFQDSASVFLVTNK---ACCGNVRYGGHLTCLPLQQPWANRNQYIFWDPF 247
+ AS L ++ C + + + ++ +F D
Sbjct: 249 GMANPASFGLAADQNLIGTCFSGNGCTMNPTYGINGSTPDPSKLLFNDSV 298
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 256 | |||
| 3kvn_X | 632 | Esterase ESTA; beta barrel, alpha-beta-alpha motif | 100.0 | |
| 3mil_A | 240 | Isoamyl acetate-hydrolyzing esterase; SGNH-hydrola | 98.97 | |
| 2hsj_A | 214 | Putative platelet activating factor; structr genom | 98.75 | |
| 3rjt_A | 216 | Lipolytic protein G-D-S-L family; PSI-biology, mid | 98.48 | |
| 1fxw_F | 229 | Alpha2, platelet-activating factor acetylhydrolase | 98.39 | |
| 1yzf_A | 195 | Lipase/acylhydrolase; structural GENO PSI, protein | 98.32 | |
| 3p94_A | 204 | GDSL-like lipase; serine hydrolase, catalytic tria | 98.26 | |
| 1es9_A | 232 | PAF-AH, platelet-activating factor acetylhydrolase | 98.07 | |
| 4hf7_A | 209 | Putative acylhydrolase; PF13472 family, structural | 98.06 | |
| 1vjg_A | 218 | Putative lipase from the G-D-S-L family; structura | 97.98 | |
| 2q0q_A | 216 | ARYL esterase; SGNH hydrolase, oligomeric enzyme, | 97.77 | |
| 1k7c_A | 233 | Rhamnogalacturonan acetylesterase; N-linked glycos | 97.58 | |
| 1esc_A | 306 | Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23. | 97.54 | |
| 2vpt_A | 215 | Lipolytic enzyme; esterase, hydrolase; 1.40A {Clos | 97.49 | |
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 97.45 | |
| 3dci_A | 232 | Arylesterase; SGNH_hydrolase SUBF structural genom | 97.21 | |
| 3hp4_A | 185 | GDSL-esterase; psychrotrophic, monoethylphosphonat | 96.98 | |
| 1ivn_A | 190 | Thioesterase I; hydrolase, protease; 1.90A {Escher | 96.97 | |
| 2o14_A | 375 | Hypothetical protein YXIM; NESG, X-RAY, SR595, str | 96.27 | |
| 3dc7_A | 232 | Putative uncharacterized protein LP_3323; NESG LPR | 96.18 | |
| 2wao_A | 341 | Endoglucanase E; plant cell WALL degradation, carb | 95.68 | |
| 3skv_A | 385 | SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydr | 95.44 | |
| 2waa_A | 347 | Acetyl esterase, xylan esterase, putative, AXE2C; | 93.34 |
| >3kvn_X Esterase ESTA; beta barrel, alpha-beta-alpha motif, cell membrane, cell out membrane, hydrolase, membrane, transmembrane; HET: C8E; 2.50A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-47 Score=369.61 Aligned_cols=220 Identities=13% Similarity=0.130 Sum_probs=168.7
Q ss_pred cCCCCCCeEEEcCCCccccCCCCCchhhhh--hcCCCCCCCCCCCCCCCCC-CCcc---------c--------------
Q 038603 13 SNTSLTPAMFIFGETMINSENNNSIMTIAR--ENYRHPHGIDFGYPTDRFC-NGIS---------A-------------- 66 (256)
Q Consensus 13 ~~~~~~~~l~vFGDSl~D~Gn~~~~~~~~~--~~~~~PyG~~~~~ptGRfS-nG~~---------g-------------- 66 (256)
..++++++||+||||++||||+..+..... ..+..|+|++| ++|||| |||+ |
T Consensus 10 ~~~~~~~~i~~FGDS~sDtGn~~~~~~~~~~~~~~~~~~g~~~--~~Gr~s~~G~~~~D~ia~~lgl~~~~l~p~~~~~~ 87 (632)
T 3kvn_X 10 EAPSPYSTLVVFGDSLSDAGQFPDPAGPAGSTSRFTNRVGPTY--QNGSGEIFGPTAPMLLGNQLGIAPGDLAASTSPVN 87 (632)
T ss_dssp SCCCCCSCEEEECSTTTCCSCSBCTTSSTTCBCCSSCBCSSSC--CTTSSCCBCCCHHHHHHHHTTCCGGGGSBSSCHHH
T ss_pred cCCCCCccEEEEccccccCCCcccccCCcCCccccccCCCCcc--ccCcccccCCchHHHHHHHcCCCccccCccccccc
Confidence 346789999999999999999754422111 11212348888 799999 9999 1
Q ss_pred ---------------cee---c-----------c-HHhHhhhhc---Cc--hhHhhhccCceEEEEeccchhhhhhcCCC
Q 038603 67 ---------------AGC---A-----------D-HNHVQPIFQ---KP--TDLTQYIAKSLFLISIGSNDYINNYLQPS 111 (256)
Q Consensus 67 ---------------aG~---i-----------~-~~~~~~~~~---g~--~~~~~~~~~sL~~i~iG~ND~~~~~~~~~ 111 (256)
+|+ + + ..|+..++. .. ...++.++++||+||||+|||+..|+.+
T Consensus 88 ~~~~~~~G~NfA~gGa~~~~~l~~~~~~~~~~~~l~~ql~~~~~~~l~~~~~~~~~~~~~sL~~v~iG~ND~~~~~~~~- 166 (632)
T 3kvn_X 88 AQQGIADGNNWAVGGYRTDQIYDSITAANGSLIERDNTLLRSRDGYLVDRARQGLGADPNALYYITGGGNDFLQGRILN- 166 (632)
T ss_dssp HHHTCCCCSBCCCTTCCHHHHHHHHHSTTCEEEEETTEEEEEECCHHHHHHTTTCCCCTTSEEEECCSHHHHHTTCCCS-
T ss_pred cccccccCceEeeccccccccccccccccccccccchhHHHHHHHHHHHHhhccCccCCCCEEEEEEechhhhcccccC-
Confidence 011 0 1 012222110 00 1223567999999999999998665421
Q ss_pred ccCCccccchhhHHHHHHHHHHHHHHHHHHcCCceeeeccCCCCCCccchhhccccccchhHHHhHHHHHHHHhc---c-
Q 038603 112 TYASSQIYSGEGFAVLIINNFSEQLSKLYILGVRKTVCARLGPLGCIPSKYLWQAATTAVIEQVNNLVTIFNSIS---F- 187 (256)
Q Consensus 112 ~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~GARk~vv~nlpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L---L- 187 (256)
.++++.+++++.++|++||++|||||+|+|+||+||+|. .. ..+|.+.+|++++.||++| |
T Consensus 167 ----------~~~~~~~v~~~~~~v~~L~~~Gar~~~v~~~pp~gc~P~-~~----~~~c~~~~n~~~~~~N~~L~~~l~ 231 (632)
T 3kvn_X 167 ----------DVQAQQAAGRLVDSVQALQQAGARYIVVWLLPDLGLTPA-TF----GGPLQPFASQLSGTFNAELTAQLS 231 (632)
T ss_dssp ----------HHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCGGGSTT-TT----TSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCccc-cc----CCCchHHHHHHHHHHHHHHHHHHH
Confidence 257889999999999999999999999999999999998 63 2479999999999999999 3
Q ss_pred cCCCceEEEEcC-ccccc-----cccCccccC--cccccCcccCCcccCCCC-----CCCCCCCCCceEeCCCCcCcccc
Q 038603 188 SSPFVFFQFIHT-EIFQD-----SASVFLVTN--KACCGNVRYGGHLTCLPL-----QQPWANRNQYIFWDPFIQRKLPM 254 (256)
Q Consensus 188 ~~~~~~i~~~D~-~~~~~-----~~yGf~~~~--~aCcg~g~~~~~~~C~~~-----~~~C~~~~~y~fwD~~HPT~~~h 254 (256)
++ +++|+++|+ .++++ ++|||+++. ++||+.|. .|++. ..+|+||++|+|||++||||++|
T Consensus 232 ~l-~~~i~~~D~y~~~~~~~~np~~yGf~~~~~~~~cCg~g~-----~C~~~~~~~~~~~C~~~~~y~fwD~~HpTe~~~ 305 (632)
T 3kvn_X 232 QA-GANVIPLNIPLLLKEGMANPASFGLAADQNLIGTCFSGN-----GCTMNPTYGINGSTPDPSKLLFNDSVHPTITGQ 305 (632)
T ss_dssp HH-CCCEEEECHHHHHHHHHHCGGGGTCCTTSCTTTCBSSCT-----TSCBCTTTSTTSSSCCGGGCSBSSSSCBCHHHH
T ss_pred hC-CCeEEEEEcHHHHHHHHhCHHhcCCCcCCCCccccCCCC-----ccCCcccccccccCCCccceEEecCCCCHHHHH
Confidence 44 458999999 98887 999999875 69999763 68753 46899999999999999999999
Q ss_pred CC
Q 038603 255 QL 256 (256)
Q Consensus 255 ~l 256 (256)
|+
T Consensus 306 ~~ 307 (632)
T 3kvn_X 306 RL 307 (632)
T ss_dssp HH
T ss_pred HH
Confidence 74
|
| >3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3 | Back alignment and structure |
|---|
| >3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A | Back alignment and structure |
|---|
| >1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5 | Back alignment and structure |
|---|
| >3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A* | Back alignment and structure |
|---|
| >4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A | Back alignment and structure |
|---|
| >2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A* | Back alignment and structure |
|---|
| >1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A* | Back alignment and structure |
|---|
| >1esc_A Esterase; 2.10A {Streptomyces scabiei} SCOP: c.23.10.1 PDB: 1esd_A 1ese_A | Back alignment and structure |
|---|
| >2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
| >3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0 | Back alignment and structure |
|---|
| >1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A* | Back alignment and structure |
|---|
| >2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8 | Back alignment and structure |
|---|
| >3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9 | Back alignment and structure |
|---|
| >2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A* | Back alignment and structure |
|---|
| >3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP} | Back alignment and structure |
|---|
| >2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 256 | |||
| d1esca_ | 302 | Esterase {Streptomyces scabies [TaxId: 1930]} | 98.37 | |
| d2o14a2 | 208 | Hypothetical protein YxiM {Bacillus subtilis [TaxI | 98.03 | |
| d2hsja1 | 211 | Uncharacterized protein SP1450 {Streptococcus pneu | 97.94 | |
| d1k7ca_ | 233 | Rhamnogalacturonan acetylesterase {Fungus (Aspergi | 97.75 | |
| d1es9a_ | 212 | Platelet-activating factor acetylhydrolase {Cow (B | 97.62 | |
| d1fxwf_ | 212 | Platelet-activating factor acetylhydrolase {Cow (B | 97.59 | |
| d1yzfa1 | 195 | Lipase/acylhydrolase {Enterococcus faecalis [TaxId | 96.49 | |
| d1jrla_ | 179 | Thioesterase I, TAP {Escherichia coli [TaxId: 562] | 95.88 | |
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 94.83 | |
| d1vjga_ | 201 | Hypothetical protein alr1529 {Nostoc sp. pcc 7120 | 94.16 |
| >d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: Esterase domain: Esterase species: Streptomyces scabies [TaxId: 1930]
Probab=98.37 E-value=2.5e-07 Score=78.16 Aligned_cols=115 Identities=8% Similarity=-0.093 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHc-CCceeeeccCCCCCC---ccchhhcc---c------cccchhHHHhHHHHHHHHhc--c-cCC
Q 038603 127 LIINNFSEQLSKLYIL-GVRKTVCARLGPLGC---IPSKYLWQ---A------ATTAVIEQVNNLVTIFNSIS--F-SSP 190 (256)
Q Consensus 127 ~~v~~~~~~v~~L~~~-GARk~vv~nlpplgc---~P~~~~~~---~------~~~~c~~~~n~~~~~~N~~L--L-~~~ 190 (256)
.+..++.+.+++|... +--+|++.+.|+.-- .|. .... . -...-...++++...+|..+ . +..
T Consensus 157 ~~~~~l~~~~~~i~~~~p~a~iv~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~i~~~A~~~ 235 (302)
T d1esca_ 157 RVGAELEELLDRIGYFAPDAKRVLVGYPRLVPEDTTKC-LTAAPGQTQLPFADIPQDALPVLDQIQKRLNDAMKKAAADG 235 (302)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEEEEECCCCCSCSCGGGG-GSCCTTCSSCTTTTCCTTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEecCcccccccCCcc-cccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444444455555443 334688888876421 000 0000 0 01123456778888999988 3 433
Q ss_pred CceEEEEcC-ccccccccCccccCcccccCcccCCcccCCCCCCCCCCCCCceEeCCCCcCccccCC
Q 038603 191 FVFFQFIHT-EIFQDSASVFLVTNKACCGNVRYGGHLTCLPLQQPWANRNQYIFWDPFIQRKLPMQL 256 (256)
Q Consensus 191 ~~~i~~~D~-~~~~~~~yGf~~~~~aCcg~g~~~~~~~C~~~~~~C~~~~~y~fwD~~HPT~~~h~l 256 (256)
+ +.++|+ ..+.. +++-...++|... .......++..+++||.+|||+++|++
T Consensus 236 ~--v~~vd~~~~f~~--~~~c~~~~~~~~~----------~~~~~~~~~~~~~~~d~~HPn~~G~~~ 288 (302)
T d1esca_ 236 G--ADFVDLYAGTGA--NTACDGADRGIGG----------LLEDSQLELLGTKIPWYAHPNDKGRDI 288 (302)
T ss_dssp T--CEEECTGGGCTT--SSTTSTTSCSBCC----------SSSEEEEESSSCEEECSSCBCHHHHHH
T ss_pred C--CEEEechhhhcc--ccccccccccccc----------cccccccccccccccCCcCCCHHHHHH
Confidence 4 557788 76641 2111111111110 011122356899999999999999973
|
| >d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
| >d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]} | Back information, alignment and structure |
|---|