Query 038604
Match_columns 315
No_of_seqs 257 out of 2497
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 12:42:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038604.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038604hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 1.5E-67 3.1E-72 488.1 29.4 257 1-313 2-317 (371)
2 PRK14288 chaperone protein Dna 100.0 5E-61 1.1E-65 455.1 29.2 257 1-313 1-312 (369)
3 PRK14296 chaperone protein Dna 100.0 4.3E-60 9.4E-65 448.9 29.5 261 1-312 2-326 (372)
4 PTZ00037 DnaJ_C chaperone prot 100.0 1.5E-59 3.3E-64 449.4 27.2 242 2-314 27-331 (421)
5 PRK14286 chaperone protein Dna 100.0 1.4E-58 3.1E-63 438.8 30.1 266 1-313 2-324 (372)
6 PRK14285 chaperone protein Dna 100.0 3.4E-58 7.3E-63 435.2 30.4 263 1-313 1-320 (365)
7 PRK14278 chaperone protein Dna 100.0 2.1E-57 4.5E-62 431.7 30.7 256 1-313 1-317 (378)
8 PRK14298 chaperone protein Dna 100.0 1.6E-57 3.4E-62 432.1 28.7 254 2-313 4-318 (377)
9 PRK14287 chaperone protein Dna 100.0 4.1E-57 8.9E-62 428.7 30.0 252 2-313 3-315 (371)
10 PRK14277 chaperone protein Dna 100.0 9.9E-57 2.1E-61 428.4 30.9 268 2-313 4-332 (386)
11 PRK14276 chaperone protein Dna 100.0 6.3E-57 1.4E-61 428.9 29.5 260 2-313 3-323 (380)
12 PRK14279 chaperone protein Dna 100.0 8.2E-57 1.8E-61 429.2 29.2 272 1-312 7-345 (392)
13 PRK14280 chaperone protein Dna 100.0 1.6E-56 3.4E-61 425.7 30.7 256 3-313 4-320 (376)
14 PRK14291 chaperone protein Dna 100.0 1.5E-56 3.2E-61 426.7 29.9 270 1-313 1-329 (382)
15 PRK14295 chaperone protein Dna 100.0 1.5E-56 3.3E-61 427.0 29.2 272 1-312 7-339 (389)
16 PRK14282 chaperone protein Dna 100.0 2.6E-56 5.6E-61 423.4 30.6 265 2-312 3-329 (369)
17 PRK14301 chaperone protein Dna 100.0 1.5E-56 3.3E-61 425.1 28.7 258 2-313 3-317 (373)
18 PRK14284 chaperone protein Dna 100.0 2E-56 4.3E-61 426.9 29.1 275 3-313 1-333 (391)
19 PRK14281 chaperone protein Dna 100.0 7.1E-56 1.5E-60 423.7 31.4 276 1-313 1-339 (397)
20 PRK14294 chaperone protein Dna 100.0 3.8E-56 8.2E-61 421.9 28.6 259 1-313 1-317 (366)
21 PRK14297 chaperone protein Dna 100.0 1E-55 2.2E-60 420.9 30.1 260 2-312 3-324 (380)
22 PRK14299 chaperone protein Dna 100.0 2.6E-55 5.6E-60 404.2 29.1 250 2-311 3-252 (291)
23 PRK10767 chaperone protein Dna 100.0 2.2E-55 4.7E-60 417.9 29.2 256 2-313 3-315 (371)
24 PRK14290 chaperone protein Dna 100.0 3.3E-55 7.1E-60 415.4 30.0 264 1-313 1-323 (365)
25 PRK14300 chaperone protein Dna 100.0 7.2E-55 1.6E-59 413.7 29.4 262 1-313 1-319 (372)
26 PRK10266 curved DNA-binding pr 100.0 8.3E-54 1.8E-58 397.0 30.6 258 1-312 2-261 (306)
27 TIGR02349 DnaJ_bact chaperone 100.0 6.3E-54 1.4E-58 405.8 29.2 259 4-313 1-320 (354)
28 PRK14283 chaperone protein Dna 100.0 1.2E-53 2.6E-58 406.4 27.1 256 2-312 4-322 (378)
29 PRK14293 chaperone protein Dna 100.0 2.3E-53 4.9E-58 404.0 26.9 259 1-313 1-320 (374)
30 PRK14292 chaperone protein Dna 100.0 9.2E-53 2E-57 399.8 28.5 254 2-313 1-315 (371)
31 PRK14289 chaperone protein Dna 100.0 7.6E-52 1.7E-56 395.2 28.8 263 2-312 4-330 (386)
32 KOG0712 Molecular chaperone (D 100.0 5.2E-52 1.1E-56 379.5 20.4 244 2-315 3-310 (337)
33 TIGR03835 termin_org_DnaJ term 100.0 4.7E-40 1E-44 322.8 29.8 140 171-312 658-798 (871)
34 KOG0713 Molecular chaperone (D 100.0 5E-40 1.1E-44 297.2 8.7 255 2-312 15-304 (336)
35 KOG0715 Molecular chaperone (D 100.0 3.1E-29 6.8E-34 229.4 13.8 221 4-271 44-288 (288)
36 KOG0714 Molecular chaperone (D 100.0 4.1E-28 9E-33 222.8 20.6 291 1-312 1-306 (306)
37 KOG0716 Molecular chaperone (D 99.8 1E-20 2.2E-25 166.7 4.9 74 2-77 30-103 (279)
38 KOG0717 Molecular chaperone (D 99.8 4.8E-20 1E-24 172.4 7.1 77 1-78 6-82 (508)
39 COG2214 CbpA DnaJ-class molecu 99.8 2.8E-18 6.1E-23 150.8 17.5 221 1-261 4-227 (237)
40 KOG0718 Molecular chaperone (D 99.8 8.4E-20 1.8E-24 170.8 5.4 74 3-76 9-83 (546)
41 PTZ00341 Ring-infected erythro 99.8 4.5E-19 9.7E-24 179.1 8.8 73 2-77 572-644 (1136)
42 KOG0719 Molecular chaperone (D 99.8 3.8E-19 8.2E-24 153.2 5.4 72 2-73 13-84 (264)
43 KOG0691 Molecular chaperone (D 99.8 8.2E-19 1.8E-23 159.7 6.1 72 2-75 4-75 (296)
44 KOG0624 dsRNA-activated protei 99.7 2.9E-18 6.3E-23 156.0 8.0 76 3-79 394-470 (504)
45 PF00226 DnaJ: DnaJ domain; I 99.7 1.6E-18 3.4E-23 123.9 4.6 64 4-68 1-64 (64)
46 PHA03102 Small T antigen; Revi 99.7 4.2E-17 9.1E-22 135.0 7.0 66 4-75 6-73 (153)
47 smart00271 DnaJ DnaJ molecular 99.7 1.6E-16 3.5E-21 111.8 6.6 59 3-62 1-59 (60)
48 KOG0721 Molecular chaperone (D 99.6 2.1E-16 4.6E-21 135.2 6.5 71 2-74 98-168 (230)
49 cd06257 DnaJ DnaJ domain or J- 99.6 5.1E-16 1.1E-20 107.2 6.5 55 4-60 1-55 (55)
50 PRK01356 hscB co-chaperone Hsc 99.5 2.4E-14 5.1E-19 121.2 6.5 69 2-70 1-72 (166)
51 PRK05014 hscB co-chaperone Hsc 99.5 3.6E-14 7.8E-19 120.7 7.0 67 3-69 1-72 (171)
52 KOG0722 Molecular chaperone (D 99.5 1.5E-14 3.2E-19 126.4 3.2 65 3-70 33-97 (329)
53 KOG0550 Molecular chaperone (D 99.5 5.3E-14 1.1E-18 131.0 6.8 66 3-69 373-438 (486)
54 PF01556 CTDII: DnaJ C termina 99.5 5.3E-14 1.1E-18 105.2 4.7 55 260-314 1-55 (81)
55 PRK03578 hscB co-chaperone Hsc 99.4 2.5E-13 5.4E-18 115.9 7.0 68 2-69 5-77 (176)
56 PRK00294 hscB co-chaperone Hsc 99.4 2.9E-13 6.3E-18 115.1 7.3 68 2-69 3-75 (173)
57 KOG0720 Molecular chaperone (D 99.4 2.7E-13 5.8E-18 127.5 5.1 65 3-70 235-299 (490)
58 PTZ00100 DnaJ chaperone protei 99.4 4.4E-13 9.5E-18 105.5 5.2 51 3-59 65-115 (116)
59 COG5407 SEC63 Preprotein trans 99.3 1.2E-12 2.7E-17 122.6 4.5 74 2-75 97-173 (610)
60 PRK09430 djlA Dna-J like membr 99.3 1.4E-12 3.1E-17 118.6 4.7 58 3-60 200-262 (267)
61 PHA02624 large T antigen; Prov 99.2 5.1E-12 1.1E-16 124.5 5.2 59 3-67 11-71 (647)
62 PRK14282 chaperone protein Dna 99.1 8.2E-11 1.8E-15 112.2 7.4 86 167-264 273-359 (369)
63 PF01556 CTDII: DnaJ C termina 99.1 3.9E-11 8.4E-16 89.7 4.1 73 171-255 1-75 (81)
64 PRK01773 hscB co-chaperone Hsc 99.1 1.3E-10 2.8E-15 98.9 7.2 68 2-69 1-73 (173)
65 PRK14290 chaperone protein Dna 99.0 4.7E-10 1E-14 106.9 7.4 86 167-265 267-353 (365)
66 TIGR00714 hscB Fe-S protein as 99.0 5.1E-10 1.1E-14 94.0 6.5 56 15-70 3-61 (157)
67 PRK14294 chaperone protein Dna 99.0 5.7E-10 1.2E-14 106.3 7.3 87 166-265 260-347 (366)
68 PRK14285 chaperone protein Dna 99.0 5.9E-10 1.3E-14 106.1 6.9 85 167-263 263-348 (365)
69 PRK14299 chaperone protein Dna 99.0 6E-10 1.3E-14 102.9 6.6 84 166-262 197-280 (291)
70 KOG1150 Predicted molecular ch 99.0 5.7E-10 1.2E-14 94.5 5.0 65 2-67 52-116 (250)
71 PRK10767 chaperone protein Dna 99.0 1.2E-09 2.7E-14 104.3 7.1 86 167-265 259-345 (371)
72 PRK14298 chaperone protein Dna 99.0 1.2E-09 2.6E-14 104.4 6.9 86 167-265 262-348 (377)
73 PRK14284 chaperone protein Dna 98.9 1.7E-09 3.7E-14 103.9 7.6 87 166-264 274-362 (391)
74 TIGR02349 DnaJ_bact chaperone 98.9 2.6E-09 5.7E-14 101.4 7.3 82 167-261 264-346 (354)
75 PRK14287 chaperone protein Dna 98.9 2.3E-09 5E-14 102.3 6.9 86 166-264 258-344 (371)
76 PRK14279 chaperone protein Dna 98.9 2.7E-09 5.9E-14 102.4 7.2 81 166-259 289-369 (392)
77 PRK14300 chaperone protein Dna 98.9 2.9E-09 6.2E-14 101.7 7.2 84 166-261 261-345 (372)
78 PRK14301 chaperone protein Dna 98.9 3.2E-09 6.9E-14 101.4 7.3 85 166-263 260-345 (373)
79 PRK14288 chaperone protein Dna 98.9 3.4E-09 7.4E-14 101.1 6.9 84 166-261 254-338 (369)
80 PRK14295 chaperone protein Dna 98.9 3.7E-09 8E-14 101.4 7.1 82 166-259 282-363 (389)
81 PRK14293 chaperone protein Dna 98.8 4E-09 8.7E-14 100.8 5.9 86 167-265 264-351 (374)
82 PRK14286 chaperone protein Dna 98.8 6.8E-09 1.5E-13 99.1 7.2 85 166-262 266-351 (372)
83 PRK10266 curved DNA-binding pr 98.8 1.6E-08 3.4E-13 94.2 9.1 79 166-258 205-283 (306)
84 PRK14291 chaperone protein Dna 98.8 1.8E-08 3.9E-13 96.6 9.7 74 167-252 272-346 (382)
85 COG5269 ZUO1 Ribosome-associat 98.8 7.2E-09 1.6E-13 91.8 5.8 68 3-70 43-113 (379)
86 PRK14276 chaperone protein Dna 98.8 9.6E-09 2.1E-13 98.4 7.0 80 167-259 267-347 (380)
87 PRK14280 chaperone protein Dna 98.8 1.3E-08 2.7E-13 97.5 7.2 81 166-259 263-344 (376)
88 PRK14281 chaperone protein Dna 98.8 1.3E-08 2.8E-13 98.0 7.1 81 166-259 282-363 (397)
89 PRK14297 chaperone protein Dna 98.7 1.6E-08 3.4E-13 96.9 7.0 79 167-258 269-348 (380)
90 COG0484 DnaJ DnaJ-class molecu 98.7 1.4E-08 2.9E-13 95.4 6.3 84 167-263 261-345 (371)
91 PRK14278 chaperone protein Dna 98.7 2.2E-08 4.7E-13 95.9 7.2 84 166-261 259-343 (378)
92 PRK14292 chaperone protein Dna 98.7 1.5E-08 3.3E-13 96.8 6.1 84 166-262 258-342 (371)
93 PRK14277 chaperone protein Dna 98.7 3.1E-08 6.7E-13 95.1 7.0 81 167-260 276-357 (386)
94 PRK14296 chaperone protein Dna 98.7 3.5E-08 7.6E-13 94.2 6.7 78 169-259 273-352 (372)
95 PRK14283 chaperone protein Dna 98.7 4.1E-08 9E-13 94.0 7.2 80 167-259 267-347 (378)
96 PTZ00037 DnaJ_C chaperone prot 98.6 4.4E-08 9.6E-13 94.7 6.3 81 166-258 270-356 (421)
97 PRK14289 chaperone protein Dna 98.6 5.6E-08 1.2E-12 93.4 6.5 78 167-257 275-353 (386)
98 TIGR03835 termin_org_DnaJ term 98.5 2.8E-07 6.1E-12 92.7 8.6 70 3-75 2-71 (871)
99 KOG0568 Molecular chaperone (D 98.4 1.4E-07 3E-12 81.9 3.4 55 3-60 47-102 (342)
100 KOG0723 Molecular chaperone (D 98.3 1.1E-06 2.3E-11 67.4 5.2 49 7-61 60-108 (112)
101 KOG1789 Endocytosis protein RM 98.2 1.2E-06 2.7E-11 89.9 5.2 51 4-59 1282-1336(2235)
102 KOG0712 Molecular chaperone (D 97.4 0.00048 1E-08 64.2 7.1 74 167-252 249-324 (337)
103 KOG3192 Mitochondrial J-type c 96.8 0.0013 2.8E-08 54.2 3.6 66 3-68 8-78 (168)
104 COG1076 DjlA DnaJ-domain-conta 96.4 0.0018 4E-08 55.3 2.2 56 3-58 113-173 (174)
105 COG1076 DjlA DnaJ-domain-conta 95.8 0.0061 1.3E-07 52.1 2.6 66 4-69 2-72 (174)
106 PF03656 Pam16: Pam16; InterP 95.2 0.033 7.2E-07 44.9 4.7 51 6-62 61-111 (127)
107 KOG0431 Auxilin-like protein a 94.6 0.044 9.6E-07 53.8 4.7 42 15-56 400-446 (453)
108 TIGR02642 phage_xxxx uncharact 86.8 0.65 1.4E-05 40.0 3.2 44 183-228 104-149 (186)
109 PF11833 DUF3353: Protein of u 83.6 1.3 2.9E-05 38.4 3.6 40 12-61 1-40 (194)
110 PF13446 RPT: A repeated domai 83.2 2.8 6.1E-05 29.1 4.6 25 5-29 7-31 (62)
111 KOG0724 Zuotin and related mol 82.1 1.4 3E-05 41.5 3.5 56 14-69 3-60 (335)
112 COG5552 Uncharacterized conser 76.8 10 0.00022 27.4 5.6 38 1-38 1-38 (88)
113 PF10041 DUF2277: Uncharacteri 72.2 18 0.00038 26.4 5.9 59 1-59 1-60 (78)
114 PF14687 DUF4460: Domain of un 64.7 13 0.00027 29.4 4.4 48 13-60 4-53 (112)
115 PF07709 SRR: Seven Residue Re 60.2 5.8 0.00013 19.1 1.1 13 47-59 2-14 (14)
116 KOG3442 Uncharacterized conser 47.8 26 0.00057 28.0 3.5 32 7-38 63-94 (132)
117 PRK14051 negative regulator Gr 41.7 1E+02 0.0022 24.0 5.8 70 240-311 48-119 (123)
118 PF12434 Malate_DH: Malate deh 37.0 41 0.00089 19.4 2.2 18 16-33 9-26 (28)
119 PF02736 Myosin_N: Myosin N-te 34.4 65 0.0014 20.4 3.3 35 254-291 5-39 (42)
120 KOG0315 G-protein beta subunit 33.3 26 0.00057 31.8 1.7 30 264-293 19-49 (311)
121 PF12791 RsgI_N: Anti-sigma fa 32.1 1.1E+02 0.0024 20.3 4.4 36 274-309 4-39 (56)
122 cd00084 HMG-box High Mobility 30.3 1.2E+02 0.0026 20.2 4.5 42 21-69 12-53 (66)
123 cd01388 SOX-TCF_HMG-box SOX-TC 29.8 76 0.0016 22.3 3.4 41 22-69 14-54 (72)
124 PF09285 Elong-fact-P_C: Elong 29.0 49 0.0011 22.6 2.1 20 211-230 30-49 (56)
125 smart00276 GLECT Galectin. Gal 28.6 77 0.0017 25.1 3.6 40 212-251 2-48 (128)
126 KOG0527 HMG-box transcription 28.1 59 0.0013 30.7 3.2 41 22-69 75-115 (331)
127 PF06675 DUF1177: Protein of u 28.0 1.7E+02 0.0037 26.5 5.8 74 228-305 73-157 (276)
128 smart00841 Elong-fact-P_C Elon 26.4 55 0.0012 22.4 2.0 20 211-230 30-49 (56)
129 cd01389 MATA_HMG-box MATA_HMG- 26.1 95 0.0021 22.1 3.4 42 21-69 13-54 (77)
130 cd01390 HMGB-UBF_HMG-box HMGB- 25.0 1.6E+02 0.0034 19.8 4.3 39 24-69 15-53 (66)
131 cd08394 C2A_Munc13 C2 domain f 23.1 1.2E+02 0.0025 24.5 3.6 51 244-301 60-110 (127)
132 cd05794 S1_EF-P_repeat_2 S1_EF 22.9 69 0.0015 21.9 1.9 20 211-230 30-49 (56)
133 KOG3960 Myogenic helix-loop-he 22.9 47 0.001 30.0 1.4 15 45-59 127-141 (284)
134 PF07739 TipAS: TipAS antibiot 22.7 1.8E+02 0.0038 22.2 4.6 52 10-72 51-104 (118)
135 COG2879 Uncharacterized small 22.5 1.4E+02 0.0031 20.9 3.4 27 23-53 27-53 (65)
136 PF02216 B: B domain; InterPr 20.7 1.4E+02 0.0031 20.1 3.0 29 5-36 13-41 (54)
137 PF11197 DUF2835: Protein of u 20.7 2.3E+02 0.005 20.2 4.3 31 262-292 2-37 (68)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-67 Score=488.07 Aligned_cols=257 Identities=37% Similarity=0.640 Sum_probs=219.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|.+|||+||||+++||.+|||+|||+||++||||+|+. +++|+++|++|+|||||||||+||+.||+||+.+++++
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g--~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~g-- 77 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPG--DKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAG-- 77 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccC--
Confidence 57899999999999999999999999999999999994 38999999999999999999999999999999988632
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
++++ .++++ |.+ ++.|||++|||++.. . +.
T Consensus 78 --g~gg-----~g~~~------------fgg-~~~DIF~~~FgGg~~------~------~~------------------ 107 (371)
T COG0484 78 --GFGG-----FGFGG------------FGG-DFGDIFEDFFGGGGG------G------RR------------------ 107 (371)
T ss_pred --CcCC-----CCcCC------------CCC-CHHHHHHHhhcCCCc------c------cC------------------
Confidence 1111 01111 111 689999999974210 0 00
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeE----EcCCC----------------------------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNV----YDSVG---------------------------------- 202 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~----~~g~G---------------------------------- 202 (315)
+...++++.|+.+.|+|||+||+.|++++|.+++.+ |+|+|
T Consensus 108 -~~~~~~rG~Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C 186 (371)
T COG0484 108 -RPNRPRRGADLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTC 186 (371)
T ss_pred -CCCCcccCCceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEEC
Confidence 112356889999999999999999999999987654 22221
Q ss_pred --------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCCCe
Q 038604 203 --------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGNDL 261 (315)
Q Consensus 203 --------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~dL 261 (315)
.++.+.++|+|+||+|+.+|++|+++|+|++.+ ++++|||||+|.|++|+.|.|+|+||
T Consensus 187 ~~C~G~G~~i~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL 266 (371)
T COG0484 187 PTCNGTGKIIKDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDL 266 (371)
T ss_pred CCCccceeECCCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCce
Confidence 057788999999999999999999999999974 77789999999999999999999999
Q ss_pred EEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 262 VVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 262 ~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++++||+.+|+||++|.|+||||+ ++|+||+++|+|+++||+|+|||..+
T Consensus 267 ~~~~~Is~~~AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~ 317 (371)
T COG0484 267 YCEVPISFTEAALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLR 317 (371)
T ss_pred EeccccCHHHHhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccC
Confidence 9999999999999999999999999 99999999999999999999999643
No 2
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5e-61 Score=455.12 Aligned_cols=257 Identities=29% Similarity=0.493 Sum_probs=212.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++||.+|||+|||+||++||||+|+. +++|+++|++|++||+||+||.+|+.||+||++++..+.
T Consensus 1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~--~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~- 77 (369)
T PRK14288 1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAG--DKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG- 77 (369)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC-
Confidence 78999999999999999999999999999999999975 267899999999999999999999999999998764210
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
+ +. .+++. . | .++.++|++|||++ + . + .
T Consensus 78 --~-~~-----~~~~~---------~--f--~~~~~~F~~~fg~g------~-~----~--~------------------ 105 (369)
T PRK14288 78 --A-SQ-----SDFSD---------F--F--EDLGSFFEDAFGFG------A-R----G--S------------------ 105 (369)
T ss_pred --C-Cc-----ccccc---------c--h--hhHHHHHHhhcCCC------C-c----c--c------------------
Confidence 0 00 01100 0 1 14556777777621 0 0 0 0
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cC------------------------------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DS------------------------------------ 200 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g------------------------------------ 200 (315)
.....++++|+.+.|.|||+|+|+|++++|.+.+.+. +|
T Consensus 106 -~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C 184 (369)
T PRK14288 106 -KRQKSSIAPDYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGAC 184 (369)
T ss_pred -CcCCCCCCCCeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCC
Confidence 0011346789999999999999999999999875421 11
Q ss_pred --CC-------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCCCeEEEE
Q 038604 201 --VG-------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 201 --~G-------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~dL~~~~ 265 (315)
.| .++.+.++++|.||||+.+|++|+|+|+|++.+++.+|||+|+|++++|+.|+|+|+||++++
T Consensus 185 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~ 264 (369)
T PRK14288 185 QGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEA 264 (369)
T ss_pred CCCceEccccCccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEE
Confidence 11 145677899999999999999999999999987888999999999999999999999999999
Q ss_pred eeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 266 EITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 266 ~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+|||+|||||+++.|+||||+.+.|+||+++++|++++|+|+|||..+
T Consensus 265 ~Isl~eAllG~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~ 312 (369)
T PRK14288 265 PVFFTTIALGHTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE 312 (369)
T ss_pred ecCHHHHhcCCEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC
Confidence 999999999999999999998899999999999999999999999654
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.3e-60 Score=448.86 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=209.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
-.+|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+|||||++|+.||+||++++..+.
T Consensus 2 ~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~---~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~- 77 (372)
T PRK14296 2 KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS---PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSS- 77 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCC-
Confidence 03799999999999999999999999999999999975 67899999999999999999999999999998765321
Q ss_pred CCCCC-CCCCCCCCCcc-ccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCC
Q 038604 81 PTSST-STSASRAGQHY-YHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSST 158 (315)
Q Consensus 81 ~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 158 (315)
+++ ++ +++.. |... ++.+ + .++.|+|++|||++ + .
T Consensus 78 --~~~~~~----~~~~~~~~~~--~~~g--~--~~f~d~f~~~fggg------~-~------------------------ 114 (372)
T PRK14296 78 --GFSSNF----GDFEDLFSNM--GSSG--F--SSFTNIFSDFFGSN------K-S------------------------ 114 (372)
T ss_pred --CcCcCC----Cccccccccc--cccc--c--ccchhhhhhhcCCC------c-c------------------------
Confidence 000 00 01100 1000 0000 1 24568899988731 0 0
Q ss_pred CCCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----c-----------------CCCc--------------
Q 038604 159 ASGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----D-----------------SVGK-------------- 203 (315)
Q Consensus 159 ~~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~-----------------g~G~-------------- 203 (315)
+.....++.|+.+.|.|||+|+|+|++++|.+.+.+. . |+|.
T Consensus 115 ---~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~ 191 (372)
T PRK14296 115 ---DYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQ 191 (372)
T ss_pred ---CCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEE
Confidence 0011346789999999999999999999998865421 1 1111
Q ss_pred -------------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeec
Q 038604 204 -------------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRD 257 (315)
Q Consensus 204 -------------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~ 257 (315)
++.+.++++|.||+|+++|++|+|+|+|++. +++.+|||+|+|+++||+.|+|+
T Consensus 192 ~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~ 271 (372)
T PRK14296 192 SAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEII 271 (372)
T ss_pred EecCCCcCCcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEe
Confidence 3456689999999999999999999999986 57789999999999999999995
Q ss_pred -CCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 258 -GNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 258 -g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
|+||+++++|||+|||||+++.|+||||+ +.|+||+++++|++++|+|+|||..
T Consensus 272 ~G~DL~~~~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri~GkGmP~~ 326 (372)
T PRK14296 272 NNNDILMTYNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKS 326 (372)
T ss_pred CCCcEEEEEecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEEcCCCCCcC
Confidence 89999999999999999999999999998 9999999999999999999999954
No 4
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=1.5e-59 Score=449.45 Aligned_cols=242 Identities=41% Similarity=0.749 Sum_probs=207.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+|||||.+|+.||+||++++.++.
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~------~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~-- 98 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD------PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGE-- 98 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch------HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCC--
Confidence 4799999999999999999999999999999999864 47999999999999999999999999987664210
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
. ..++.|+|+.|||++ + .
T Consensus 99 -----------------------~-----~~d~~d~f~~~Fggg------~-~--------------------------- 116 (421)
T PTZ00037 99 -----------------------Q-----PADASDLFDLIFGGG------R-K--------------------------- 116 (421)
T ss_pred -----------------------C-----CcchhhhHHHhhccc------c-c---------------------------
Confidence 0 024678999999741 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE--------------------cCCC-------------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY--------------------DSVG------------------- 202 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~--------------------~g~G------------------- 202 (315)
....+++.|+.+.|.|||+|+|+|++++|.+.+.+. +|.|
T Consensus 117 -~~~~~rg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C 195 (421)
T PTZ00037 117 -PGGKKRGEDIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTC 195 (421)
T ss_pred -cccccCCCCEEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeC
Confidence 001246789999999999999999999998864321 1111
Q ss_pred -------c---------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCCC
Q 038604 203 -------K---------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGND 260 (315)
Q Consensus 203 -------~---------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~d 260 (315)
+ ++.+.++++|.||+|+.+|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|
T Consensus 196 ~~C~G~G~~i~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~D 275 (421)
T PTZ00037 196 NSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGD 275 (421)
T ss_pred CCCCCcceeccccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCe
Confidence 1 345568899999999999999999999999888899999999999999999999999
Q ss_pred eEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCC--cCCCcEEEEcCCCcCCCCC
Q 038604 261 LVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDI--VKPGTEIVVPNEGMPISKE 314 (315)
Q Consensus 261 L~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~--~~~g~~~~i~g~G~P~~~~ 314 (315)
|+++++|||+|||||+++.|+||||+.|.|+||++ ++||++++|+|+|||..+.
T Consensus 276 L~~~~~Isl~eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~ 331 (421)
T PTZ00037 276 LFITKKISLYEALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKS 331 (421)
T ss_pred EEEEEeCCHHHHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCC
Confidence 99999999999999999999999999899999865 9999999999999997653
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-58 Score=438.76 Aligned_cols=266 Identities=31% Similarity=0.583 Sum_probs=214.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
-..|||+||||+++||.+|||+|||+||++||||+|+. +++|+++|++|++||+||+||.+|+.||+||++++..+..
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~ 79 (372)
T PRK14286 2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKG--NKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAG 79 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccC
Confidence 04899999999999999999999999999999999975 3678999999999999999999999999999987753210
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
+++. +++.+|. . .| .++.|+|++|||+.. ++ . . .+ .
T Consensus 80 --~~~~-----~~~~~~~------~--~~--~~~~d~f~~ffgg~~----~~-~----~-~~--------~--------- 115 (372)
T PRK14286 80 --GFGQ-----GAYTDFS------D--IF--GDFGDIFGDFFGGGR----GG-G----S-GG--------G--------- 115 (372)
T ss_pred --CCCC-----CCccccc------c--cc--cchhhHHHHhhCCCc----cC-C----C-cc--------c---------
Confidence 1000 0111110 0 01 257899999998421 00 0 0 00 0
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCCC----------------------------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSVG---------------------------------- 202 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~G---------------------------------- 202 (315)
......++.|+.+.|.|||+|+|+|++++|.+.+.+. +|+|
T Consensus 116 -~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~ 194 (372)
T PRK14286 116 -RRSGPQRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPT 194 (372)
T ss_pred -ccCCCCCCCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCC
Confidence 0112346889999999999999999999999875432 1111
Q ss_pred ------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCCCeEE
Q 038604 203 ------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGNDLVV 263 (315)
Q Consensus 203 ------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~dL~~ 263 (315)
.++.+.++++|.||+|+.+|++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+||++
T Consensus 195 C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~ 274 (372)
T PRK14286 195 CRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLIL 274 (372)
T ss_pred CCceeeEecccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEE
Confidence 044566899999999999999999999999865 4567999999999999999999999999
Q ss_pred EEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 264 GQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 264 ~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++|||++||+|+++.|+||||+++.|+||+++++|++++|+|+|||..+
T Consensus 275 ~~~Isl~eAl~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~ 324 (372)
T PRK14286 275 VRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLG 324 (372)
T ss_pred EEEECHHHHhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCC
Confidence 99999999999999999999999899999999999999999999999754
No 6
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.4e-58 Score=435.24 Aligned_cols=263 Identities=31% Similarity=0.557 Sum_probs=215.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++||.+|||+|||+||++||||+|+. ++++.++|++|++||+||+|+.+|+.||+||++++..+.
T Consensus 1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~- 77 (365)
T PRK14285 1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKG--NKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGG- 77 (365)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--CHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCC-
Confidence 77899999999999999999999999999999999975 367889999999999999999999999999998765321
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
+++++ .+++.+|+ ..| .++.|+|++|||+. ++ . .
T Consensus 78 --~~~~~---~~g~~~~~--------~~~--~~~~d~f~~~fgg~-----~~-~----~--------------------- 111 (365)
T PRK14285 78 --GFEGF---SGGFSGFS--------DIF--EDFGDIFDSFFTGN-----RG-Q----D--------------------- 111 (365)
T ss_pred --Ccccc---CCCccccc--------ccc--ccHHHHHHHhhcCC-----cC-C----C---------------------
Confidence 10000 00111110 001 25789999999841 00 0 0
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCC-----------------C-----------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSV-----------------G----------------- 202 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~-----------------G----------------- 202 (315)
+.....++.|+.+.|.|||+|+|+|++++|.+.|.+. +|+ |
T Consensus 112 -~~~~~~~g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~ 190 (365)
T PRK14285 112 -KNRKHEKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPK 190 (365)
T ss_pred -CCcCCCCCCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCC
Confidence 0011346789999999999999999999999876532 111 1
Q ss_pred ------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEEEEecCCCCeeecCCCeEE
Q 038604 203 ------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFIVDEKPHALYRRDGNDLVV 263 (315)
Q Consensus 203 ------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~i~v~~h~~f~R~g~dL~~ 263 (315)
.++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|++++|+.|+|+|+||++
T Consensus 191 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~ 270 (365)
T PRK14285 191 CYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYA 270 (365)
T ss_pred CCCcccccCCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEE
Confidence 0356678999999999999999999999999754 568999999999999999999999999
Q ss_pred EEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 264 GQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 264 ~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++|||.|||+|+++.|+||||+++.|+||+++++|++++|+|+|||..+
T Consensus 271 ~~~Isl~eAl~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~ 320 (365)
T PRK14285 271 TLPISFTQAALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILH 320 (365)
T ss_pred EEecCHHHHhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCC
Confidence 99999999999999999999999899999999999999999999999754
No 7
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-57 Score=431.65 Aligned_cols=256 Identities=34% Similarity=0.567 Sum_probs=210.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+|+.+|+.||+||++...++
T Consensus 1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~-- 75 (378)
T PRK14278 1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG-- 75 (378)
T ss_pred CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc--
Confidence 78899999999999999999999999999999999985 6789999999999999999999999999998632211
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
+. + ++ |+ .+ | .++.|+|++|||++ + . + .+
T Consensus 76 --~~-~-----~g---~~------~~--f--~~~~d~f~~ffgg~------g-~----~-~~------------------ 104 (378)
T PRK14278 76 --GG-G-----GG---FG------GG--F--GGLGDVFEAFFGGG------A-A----S-RG------------------ 104 (378)
T ss_pred --CC-C-----CC---CC------cC--c--CchhHHHHHHhCCC------C-C----C-CC------------------
Confidence 00 0 01 10 01 1 14678999999841 0 0 0 00
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE---------------------cCCCc----------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY---------------------DSVGK---------------- 203 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~---------------------~g~G~---------------- 203 (315)
.....+++.|+.+.|.|||+|+|+|+++++.+.+.+. +|.|.
T Consensus 105 -~~~~~~~g~d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~ 183 (378)
T PRK14278 105 -PRGRVRPGSDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSR 183 (378)
T ss_pred -CccCCCCCCCeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEE
Confidence 0011346889999999999999999999998876431 11111
Q ss_pred -----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCC
Q 038604 204 -----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGN 259 (315)
Q Consensus 204 -----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~ 259 (315)
++.++++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|+++||+.|+|+|+
T Consensus 184 ~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~ 263 (378)
T PRK14278 184 PCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGD 263 (378)
T ss_pred ECCCCCccceeeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCC
Confidence 34556899999999999999999999999976 456799999999999999999999
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
||+++++|||.+||+|+++.|+|||+..+.|+||+++++|++++|+|+|||..+
T Consensus 264 DL~~~~~Isl~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~ 317 (378)
T PRK14278 264 DLHCTVSVPMVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLR 317 (378)
T ss_pred CEEEEEecCHHHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCC
Confidence 999999999999999999999999777799999999999999999999999743
No 8
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-57 Score=432.11 Aligned_cols=254 Identities=31% Similarity=0.537 Sum_probs=210.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
.+|||+||||+++|+.+|||+|||+||++||||+|++ ++++++|++|++||++|+||.+|+.||+||++++..+..
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~- 79 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE---PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYS- 79 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC---hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccC-
Confidence 4799999999999999999999999999999999975 678899999999999999999999999999987653210
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+ . .+|.+ .+ | .++.|+|++|||++. + .
T Consensus 80 ----~-----~--~~~~~-----~~--~--~~~~d~f~~~Fgg~~-----~-~--------------------------- 106 (377)
T PRK14298 80 ----A-----E--DIFRG-----AD--F--GGFGDIFEMFFGGGG-----R-R--------------------------- 106 (377)
T ss_pred ----c-----c--ccccc-----CC--c--CcchhhhHhhhcCCC-----c-c---------------------------
Confidence 0 0 00100 00 1 135689999998410 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----C-----------------CCc-----------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----S-----------------VGK----------------- 203 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g-----------------~G~----------------- 203 (315)
.....+++.|+.+.|.|||+|+|+|++++|.+.+.+.| | .|.
T Consensus 107 ~~~~~~~g~di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~ 186 (377)
T PRK14298 107 GRMGPRRGSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTT 186 (377)
T ss_pred CCCCCCCCCCEEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEe
Confidence 00113467899999999999999999999998754321 1 111
Q ss_pred ----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCC
Q 038604 204 ----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGND 260 (315)
Q Consensus 204 ----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~d 260 (315)
++.+.++++|.||||+++|++|+|+|+|++. +++.+|||||+|++++|+.|+|+|+|
T Consensus 187 C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~D 266 (377)
T PRK14298 187 CSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDD 266 (377)
T ss_pred CCCCCCCCcccCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCc
Confidence 3456789999999999999999999999985 56779999999999999999999999
Q ss_pred eEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 261 LVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 261 L~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
|+++++|||.|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 267 L~~~~~Isl~eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~ 318 (377)
T PRK14298 267 IISEIPISFTQAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLH 318 (377)
T ss_pred EEEEEEeCHHHHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCC
Confidence 99999999999999999999999998 89999999999999999999999753
No 9
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.1e-57 Score=428.66 Aligned_cols=252 Identities=30% Similarity=0.567 Sum_probs=209.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|+. ++++++|++|++||++|+||.+|+.||+||++++..+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~---~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~-- 77 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA---PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGF-- 77 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCccccccc--
Confidence 3699999999999999999999999999999999975 67889999999999999999999999999998765321
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+ + +++ .+ | .++.|+|++|||++. + . .
T Consensus 78 -~--~-----~~~----------~~--f--~~~~d~f~~~fgg~~-----~-~------~-------------------- 103 (371)
T PRK14287 78 -G--G-----GGA----------GD--F--GGFSDIFDMFFGGGG-----G-R------R-------------------- 103 (371)
T ss_pred -C--C-----CCC----------cc--c--cchHHHHHhhhcccc-----C-C------C--------------------
Confidence 0 0 000 01 1 135799999998410 0 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC-----------------c-----------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG-----------------K----------------- 203 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G-----------------~----------------- 203 (315)
....+.++.|+.+.|.|||+|+|+|++++|.+.+.+.| |+| .
T Consensus 104 ~~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~ 183 (371)
T PRK14287 104 NPNAPRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRV 183 (371)
T ss_pred CCCCCCCCCCEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEe
Confidence 00112468899999999999999999999988764321 111 0
Q ss_pred ----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCC
Q 038604 204 ----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGND 260 (315)
Q Consensus 204 ----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~d 260 (315)
++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+|+|
T Consensus 184 C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~D 263 (371)
T PRK14287 184 CHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDD 263 (371)
T ss_pred CCCCCCCCccccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCC
Confidence 2345678999999999999999999999986 45678999999999999999999999
Q ss_pred eEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 261 LVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 261 L~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
|+++++|||++||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 264 L~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~ 315 (371)
T PRK14287 264 IYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVH 315 (371)
T ss_pred eEEEEeccHHHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCC
Confidence 99999999999999999999999998 89999999999999999999999653
No 10
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.9e-57 Score=428.38 Aligned_cols=268 Identities=33% Similarity=0.557 Sum_probs=212.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|+. .++++++|++|++||+||+|+.+|+.||+||++++..+...
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~ 81 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPG--DKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFG 81 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCC--chHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccc
Confidence 4799999999999999999999999999999999985 36788999999999999999999999999999877532110
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
.+ + .+..+|.. .++.+...++.|+|++||+.. | ++ . + . .
T Consensus 82 ~~--~-----~~~~g~~~-----~~~~~~~~~~~d~f~~~F~~~--f--gg-~----~--~-------~----------- 120 (386)
T PRK14277 82 QG--G-----FGQGGFGG-----GGFDFDFGGFGDIFEDIFGDF--F--GT-G----R--R-------R----------- 120 (386)
T ss_pred cC--C-----cCCCCccc-----cCccccccchhHHHHHhhccc--c--cC-C----C--c-------C-----------
Confidence 00 0 00001100 011111124668899988731 1 10 0 0 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC-----------------------------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG----------------------------------- 202 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G----------------------------------- 202 (315)
......+++|+.+.|.|||+|+|+|++++|.+.|.+.| |+|
T Consensus 121 ~~~~~~kg~di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~ 200 (386)
T PRK14277 121 AETGPQKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRT 200 (386)
T ss_pred CCCCCCCCCCEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEE
Confidence 00113468899999999999999999999998765421 111
Q ss_pred ---------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCC
Q 038604 203 ---------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGND 260 (315)
Q Consensus 203 ---------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~d 260 (315)
.++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+|+|
T Consensus 201 C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~D 280 (386)
T PRK14277 201 CDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYN 280 (386)
T ss_pred CCCCCcceeeccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCC
Confidence 03456788999999999999999999999985 45678999999999999999999999
Q ss_pred eEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 261 LVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 261 L~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
|+++++|||+|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 281 L~~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ri~g~G~p~~~ 332 (386)
T PRK14277 281 VYLEMPITFTDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLR 332 (386)
T ss_pred EEEEEEcCHHHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEEEECCCCCCCCC
Confidence 99999999999999999999999998 89999999999999999999999754
No 11
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.3e-57 Score=428.93 Aligned_cols=260 Identities=28% Similarity=0.507 Sum_probs=211.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|++ +.++++|++|++||++|+||.+|+.||+||++++.+++..
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~---~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~ 79 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE---PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGG 79 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCC
Confidence 4799999999999999999999999999999999975 5688999999999999999999999999999877532110
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
.+ +++++|... .+ + .++.|+|++|||++ ++ . .
T Consensus 80 ~~--------~~~~~~~~~----~~--~--~~~~d~f~~~fgg~-----~~------~-~-------------------- 111 (380)
T PRK14276 80 GA--------GGFGGFDGS----GG--F--GGFEDIFSSFFGGG-----GA------R-R-------------------- 111 (380)
T ss_pred CC--------CCCCCcccc----cc--c--cchhhHHHHHhCcc-----cc------c-c--------------------
Confidence 00 011111100 01 1 24679999999841 00 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCC-----------------C------------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSV-----------------G------------------ 202 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~-----------------G------------------ 202 (315)
.....+++.|+.+.|.|||+|+|+|++++|.+.+.+. +|+ |
T Consensus 112 ~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~ 191 (380)
T PRK14276 112 NPNAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVT 191 (380)
T ss_pred CcCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEE
Confidence 0011346789999999999999999999998865421 111 1
Q ss_pred ---------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCCC
Q 038604 203 ---------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGND 260 (315)
Q Consensus 203 ---------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~d 260 (315)
.++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+|
T Consensus 192 C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~D 271 (380)
T PRK14276 192 CDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGST 271 (380)
T ss_pred CCCCCCCCccccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecce
Confidence 034567899999999999999999999999864 4567999999999999999999999
Q ss_pred eEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 261 LVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 261 L~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
|+++++|||.|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 272 L~~~~~Isl~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~ 323 (380)
T PRK14276 272 IYYTLPISFVQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGAPKLR 323 (380)
T ss_pred EEEEEecCHHHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCcCCCC
Confidence 99999999999999999999999998 89999999999999999999999753
No 12
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-57 Score=429.19 Aligned_cols=272 Identities=29% Similarity=0.442 Sum_probs=206.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|.+|||+||||+++|+.+|||+|||+||++||||+|+. +++|+++|++|++||+|||||++|+.||+||+++...+..
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~ 84 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPG--DPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFG 84 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccc
Confidence 46899999999999999999999999999999999975 3678999999999999999999999999999764322211
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCC----------CCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccc
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRF----------NPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLF 150 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f 150 (315)
..++.+ .+++++|+.+.. +..++| ....+.|+|+.||+++ + .
T Consensus 85 ~~~~~~----~~~~~g~~~~~~-~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~~------~-~---------------- 136 (392)
T PRK14279 85 GRRFDG----GGGFGGFGTGGD-GAEFNLNDLFDAAGRGGGGGIGDLFGGLFNRG------G-G---------------- 136 (392)
T ss_pred cccccC----CCCCCCcccccc-ccCcChhhhhcccccccccchhhhhhhhhcCC------C-c----------------
Confidence 000000 000111110000 000000 0001234444444310 0 0
Q ss_pred cCCCCCCCCCCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCCC------------------------
Q 038604 151 RNGNCSSTASGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSVG------------------------ 202 (315)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~G------------------------ 202 (315)
+.+....++++|+.+.|.|||+|+|+|++++|.+.+.+. +|+|
T Consensus 137 ---------~~~~~~~~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g 207 (392)
T PRK14279 137 ---------SARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQG 207 (392)
T ss_pred ---------ccccCCCCCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEec
Confidence 001112346889999999999999999999998865431 1111
Q ss_pred ----------------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCC
Q 038604 203 ----------------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHAL 253 (315)
Q Consensus 203 ----------------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~ 253 (315)
.++.+.++++|.||||+.+|++|+|+|+|++.+ +..+|||+|+|++++|+.
T Consensus 208 ~~~~~~~C~~C~G~G~~i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~ 287 (392)
T PRK14279 208 AFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKV 287 (392)
T ss_pred ceEEEEecCCCCceeEEeCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCc
Confidence 145677899999999999999999999999865 456799999999999999
Q ss_pred eeecCCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 254 YRRDGNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 254 f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
|+|+|+||+++++|||.+||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..
T Consensus 288 F~R~G~DL~~~~~Isl~eAl~G~~~~v~~ldg~-i~v~Ip~g~~~g~~iri~g~G~p~~ 345 (392)
T PRK14279 288 FGRDGDDLTVTVPVSFTELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKR 345 (392)
T ss_pred ceeecCcEEEEEEccHHHHcCCceEEEEcCCce-EEEEECCCCCCCCEEEECCCCCCCC
Confidence 999999999999999999999999999999997 8999999999999999999999963
No 13
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.6e-56 Score=425.65 Aligned_cols=256 Identities=31% Similarity=0.555 Sum_probs=210.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCCC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVPT 82 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 82 (315)
.|||+||||+++|+.+|||+|||+||++||||+|++ +.++++|++|++||++|+||.+|+.||+||++++..+...+
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~---~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~ 80 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE---EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGGG 80 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCCC
Confidence 799999999999999999999999999999999976 56889999999999999999999999999998775321000
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCC
Q 038604 83 SSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASGG 162 (315)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 162 (315)
+ + +..+|. ++ | ++.|+|++|||++ + . . . .
T Consensus 81 ~---~-----~~~~~~------~~--~---~~~d~f~~~fgg~------~-~----~-~--------------------~ 109 (376)
T PRK14280 81 G---F-----GGGDFG------GG--F---GFEDIFSSFFGGG------G-R----R-R--------------------D 109 (376)
T ss_pred C---C-----CCCCcc------cc--c---cchhhHHHHhCCc------c-c----c-C--------------------c
Confidence 0 0 000010 01 1 3578999999741 0 0 0 0 0
Q ss_pred CcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC------------------------------------
Q 038604 163 AAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG------------------------------------ 202 (315)
Q Consensus 163 ~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G------------------------------------ 202 (315)
....+++.|+.+.|.|||+|+|+|++++|.+.+.+.| |+|
T Consensus 110 ~~~~~kg~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C 189 (376)
T PRK14280 110 PNAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTC 189 (376)
T ss_pred ccccccccCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEc
Confidence 0113468899999999999999999999998765321 111
Q ss_pred --------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCCCe
Q 038604 203 --------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGNDL 261 (315)
Q Consensus 203 --------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~dL 261 (315)
.++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||
T Consensus 190 ~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL 269 (376)
T PRK14280 190 PHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDI 269 (376)
T ss_pred CCCCCCCceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCE
Confidence 034567899999999999999999999999854 46789999999999999999999999
Q ss_pred EEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 262 VVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 262 ~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++++|||+|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 270 ~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~ 320 (376)
T PRK14280 270 YCEMPLTFAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVR 320 (376)
T ss_pred EEEEecCHHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCC
Confidence 9999999999999999999999997 89999999999999999999999753
No 14
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-56 Score=426.67 Aligned_cols=270 Identities=37% Similarity=0.586 Sum_probs=215.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|.+|||+||||+++|+.+|||+|||+||++||||+|++ +++.++|++|++||++|+||.+|+.||+||++++.....
T Consensus 1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~ 77 (382)
T PRK14291 1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN---PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQ 77 (382)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccC
Confidence 67899999999999999999999999999999999986 678899999999999999999999999999987653210
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCC---CCCCCCCCCCCCCCCCCCCccccccccCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGS---ESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSS 157 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~---~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 157 (315)
+. .+..+|. . +...++.|+|.+||+. +..| ++ .. .. ..
T Consensus 78 --~~-------~~~~~~~-------~--~~~~~~~d~f~~~f~~fg~~~~f--g~-------~~---------~~---~~ 118 (382)
T PRK14291 78 --QQ-------QGQEGFS-------D--FGGGNIEDILEDVFDIFGFGDIF--GR-------RR---------AT---RE 118 (382)
T ss_pred --cc-------ccccccc-------c--ccCCCHHHHHHHHHHhccccccc--cc-------cc---------cc---cc
Confidence 00 0000110 0 1113577899988642 1111 00 00 00 00
Q ss_pred CCCCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC-------------------------------
Q 038604 158 TASGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG------------------------------- 202 (315)
Q Consensus 158 ~~~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G------------------------------- 202 (315)
. ........+++|+.+.|.|||+|+|+|++++|.+.+.+.| |+|
T Consensus 119 ~-~~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~ 197 (382)
T PRK14291 119 R-RKTYQRPVKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQT 197 (382)
T ss_pred c-ccccccccCCCCEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEec
Confidence 0 0001123468899999999999999999999998765321 211
Q ss_pred --------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCCe
Q 038604 203 --------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGNDL 261 (315)
Q Consensus 203 --------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~dL 261 (315)
.++.+.++++|.||||+.+|++|+|+|+|++. +++.+|||||+|++++|+.|+|+|+||
T Consensus 198 C~~C~G~G~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL 277 (382)
T PRK14291 198 CPTCGGEGVLREPCSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNL 277 (382)
T ss_pred CCCCCCceEEccCCCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCe
Confidence 13567789999999999999999999999986 477899999999999999999999999
Q ss_pred EEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 262 VVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 262 ~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++++|||.|||+|+++.|+|+||+.+.|+||+++++|++++|+|+|||..+
T Consensus 278 ~~~~~Isl~eAl~G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~ 329 (382)
T PRK14291 278 YLDVNITVAEAVLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLK 329 (382)
T ss_pred EEEEEeeHHHHhCCCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCC
Confidence 9999999999999999999999998899999999999999999999999754
No 15
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-56 Score=426.97 Aligned_cols=272 Identities=29% Similarity=0.462 Sum_probs=207.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc----ccccccC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL----YGEEGLK 76 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~----~G~~~~~ 76 (315)
|..|||+||||+++||.+|||+|||+||++||||+|+. .++++++|++|++||+||+||.+|+.||+ ||++++.
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~ 84 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKG--DAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFR 84 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCC--chhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccc
Confidence 56799999999999999999999999999999999975 35789999999999999999999999999 9988775
Q ss_pred CCCCCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCC
Q 038604 77 SGTVPTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCS 156 (315)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 156 (315)
.+...++.+++..+... .|....+++....+. ..+.|+|+.||+++ +
T Consensus 85 ~~~~~~~~~~~~~~~~~--~f~~~~~~~~~~~~~-~~f~d~f~~~fg~~------~------------------------ 131 (389)
T PRK14295 85 PGPGGGGGGGFNFDLGD--LFGGGAQGGGGAGGG-GGLGDVFGGLFNRG------G------------------------ 131 (389)
T ss_pred cCCCCCCCCCCCccccc--ccccccccccccccc-cchhhhhcccccCC------C------------------------
Confidence 32100000000000000 000000000000000 01334444444310 0
Q ss_pred CCCCCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CC-------------------------------
Q 038604 157 STASGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SV------------------------------- 201 (315)
Q Consensus 157 ~~~~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~------------------------------- 201 (315)
.....++++|+.+.|.|||+|+|+|++++|.+.+.+.| |+
T Consensus 132 -----~~~~~~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~ 206 (389)
T PRK14295 132 -----RRTQPRRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSE 206 (389)
T ss_pred -----CCCCCCCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEE
Confidence 01123468899999999999999999999998754311 11
Q ss_pred --------C-------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCC
Q 038604 202 --------G-------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGN 259 (315)
Q Consensus 202 --------G-------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~ 259 (315)
| .++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+|+
T Consensus 207 ~C~~C~G~G~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~ 286 (389)
T PRK14295 207 PCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGD 286 (389)
T ss_pred ecCCCcceeEEeccCCCCCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecC
Confidence 1 14566789999999999999999999999985 4567899999999999999999999
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
||+++++|||++||+|++++|+||||+++.|+||+++++|++++|+|+|||..
T Consensus 287 DL~~~~~Isl~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~ 339 (389)
T PRK14295 287 NLTVTVPVTFPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRK 339 (389)
T ss_pred CEEEEEeecHHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCC
Confidence 99999999999999999999999999889999999999999999999999963
No 16
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-56 Score=423.44 Aligned_cols=265 Identities=32% Similarity=0.540 Sum_probs=210.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|+. ++.+|+++|++|++||++|+||.+|+.||+||++++......
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~ 81 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPE-NRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCcc-chhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence 4799999999999999999999999999999999975 235689999999999999999999999999998776421100
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCC-CCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSF-RFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
.+ + .+++ |. ..| .|......|+|++|||+. ++ . . .
T Consensus 82 ~~--~----~g~~--~~------~~~~~~~~~~~~d~f~~~fgg~-----~~-~----~-~------------------- 117 (369)
T PRK14282 82 TE--S----GGGF--FE------DIFKDFENIFNRDIFDIFFGER-----RT-Q----E-E------------------- 117 (369)
T ss_pred CC--C----CCcc--cc------cccccccccccchhhhHhhccc-----CC-c----c-c-------------------
Confidence 00 0 0010 00 000 011001137889888741 00 0 0 0
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----C-----------------CCc----------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----S-----------------VGK---------------- 203 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g-----------------~G~---------------- 203 (315)
.....++++|+.+.|.|||+|+|+|++++|.+.|.+.| | .|.
T Consensus 118 -~~~~~~~g~di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~ 196 (369)
T PRK14282 118 -QREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSER 196 (369)
T ss_pred -ccCCCCCCCCeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEE
Confidence 00113468899999999999999999999998754311 1 111
Q ss_pred -----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCC
Q 038604 204 -----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGN 259 (315)
Q Consensus 204 -----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~ 259 (315)
++.+.++++|.||||+.+|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+|+
T Consensus 197 ~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~ 276 (369)
T PRK14282 197 TCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGS 276 (369)
T ss_pred ECCCCCCcceeCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecC
Confidence 3455689999999999999999999999985 4567899999999999999999999
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
||+++++|||.||++|+++.|+|+||+++.|+||+++++|++++|+|+|||..
T Consensus 277 DL~~~~~Isl~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~ 329 (369)
T PRK14282 277 DLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNM 329 (369)
T ss_pred CEEEEEEeCHHHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCC
Confidence 99999999999999999999999999989999999999999999999999964
No 17
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-56 Score=425.09 Aligned_cols=258 Identities=32% Similarity=0.576 Sum_probs=211.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|++ +++|+++|++|++||+||+||.+|+.||+||++++.++.
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~-- 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPD--NPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG-- 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCC--ChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC--
Confidence 5899999999999999999999999999999999975 367889999999999999999999999999998765321
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
++ ++ |.+. .. .| ..+.|+|++|||.+. + . + .
T Consensus 79 -~~-------~g---~~~~----~~-~~--~~f~d~f~~~fg~g~-----~-~----~-~-------------------- 109 (373)
T PRK14301 79 -GF-------GG---FSSA----ED-IF--SHFSDIFGDLFGFSG-----G-G----S-R-------------------- 109 (373)
T ss_pred -CC-------CC---cccc----cc-cc--cchHHHHHHHhhccC-----c-c----c-c--------------------
Confidence 00 01 1100 00 01 245788988887310 0 0 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCCC-----------------------------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSVG----------------------------------- 202 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~G----------------------------------- 202 (315)
+.....++.|+.+.|.|||+|+|+|+++++.+.+.+. +|+|
T Consensus 110 ~~~~~~~g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C 189 (373)
T PRK14301 110 RGPRPQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVC 189 (373)
T ss_pred cCCCCCCCCCEEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCC
Confidence 0011346889999999999999999999998865432 1111
Q ss_pred -----------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCCCeEEE
Q 038604 203 -----------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGNDLVVG 264 (315)
Q Consensus 203 -----------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~dL~~~ 264 (315)
.++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++
T Consensus 190 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~ 269 (373)
T PRK14301 190 RGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVT 269 (373)
T ss_pred CceeeecCCCCCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEE
Confidence 135567899999999999999999999999864 56789999999999999999999999999
Q ss_pred EeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 265 QEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 265 ~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
++|||.+||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 270 ~~Isl~eAl~G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~ 317 (373)
T PRK14301 270 QEISFVQAALGDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLG 317 (373)
T ss_pred EEecHHHHhCCCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCC
Confidence 9999999999999999999998 99999999999999999999999754
No 18
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-56 Score=426.94 Aligned_cols=275 Identities=31% Similarity=0.519 Sum_probs=209.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCCC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVPT 82 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 82 (315)
+|||+||||+++||.+|||+|||+||++||||+|++ ++.++++|++|++||++|+|+.+|+.||+||++++..+....
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~ 78 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPG--DAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGF 78 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCc
Confidence 489999999999999999999999999999999986 367899999999999999999999999999998764321000
Q ss_pred CCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCC
Q 038604 83 SSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASGG 162 (315)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 162 (315)
+.+++......+..|.+.+ + .. | ..+.|+|++||++... + |+.. ..
T Consensus 79 ~~~g~~~~~~~~~~~~~~f-~-~~--~--~~~~d~f~~~fgg~g~----~-----------------~~~~-------~~ 124 (391)
T PRK14284 79 GGAGMGNMEDALRTFMGAF-G-GE--F--GGGGSFFEGLFGGLGE----A-----------------FGMR-------GG 124 (391)
T ss_pred CCCCcCcccchhhhccccc-c-cc--c--cccccchhhhccCccc----c-----------------cccc-------cc
Confidence 0000000000000000000 0 00 1 0124778888863100 0 0000 00
Q ss_pred CcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CC-------------------------------------
Q 038604 163 AAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SV------------------------------------- 201 (315)
Q Consensus 163 ~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~------------------------------------- 201 (315)
....+++.|+.+.|.|||+|+|+|+++++.+.+.+.| |+
T Consensus 125 ~~~~~~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~ 204 (391)
T PRK14284 125 PAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECG 204 (391)
T ss_pred CCCcCCCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCC
Confidence 0113467899999999999999999999998764321 11
Q ss_pred --C-------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCCCeEEEE
Q 038604 202 --G-------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 202 --G-------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~dL~~~~ 265 (315)
| .++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||++++
T Consensus 205 G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~ 284 (391)
T PRK14284 205 GEGRVITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILEL 284 (391)
T ss_pred CCCcccCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEE
Confidence 1 034567899999999999999999999999975 567899999999999999999999999999
Q ss_pred eeCHHHHHcCCeEEEecCC-CcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 266 EITLLEALTGKTLDLTTLD-GRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 266 ~Isl~eal~G~~~~i~tld-G~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+|||++||+|+++.|+||| |..+.|+||+++++|++++|+|+|||..+
T Consensus 285 ~Isl~eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~ 333 (391)
T PRK14284 285 PIGFVDAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVH 333 (391)
T ss_pred EecHHHHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCC
Confidence 9999999999999999999 66799999999999999999999999753
No 19
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.1e-56 Score=423.66 Aligned_cols=276 Identities=33% Similarity=0.613 Sum_probs=211.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++|+.+|||+|||+||++||||++++ .++|+++|++|++||++|+|+.+|+.||+||++++.....
T Consensus 1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~ 78 (397)
T PRK14281 1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPD--NKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAA 78 (397)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCC--chHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccc
Confidence 78899999999999999999999999999999999975 3568899999999999999999999999999987753210
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHH---HHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDI---YEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSS 157 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~---f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 157 (315)
..+ + .+|.+ .. .++.|+ |++|||++..+ .+ . ...++. ..|+.. .
T Consensus 79 ~~~--~--------~~~~~-----~~-----~~~~d~f~~f~~~Fgg~~~~--~~-~----~~~~~~---~~~~g~---~ 125 (397)
T PRK14281 79 SGG--G--------PGYGG-----GG-----GDFNDIFSAFNDMFGGGARR--GG-G----SPFGFE---DVFGGG---G 125 (397)
T ss_pred cCC--C--------CCCCc-----CC-----CCHHHHHHHHHHHhCCCccc--cc-c----cccccc---cccCCC---c
Confidence 000 0 00100 00 133445 45888752211 00 0 000000 001100 0
Q ss_pred CCCCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----C----------------CCc--------------
Q 038604 158 TASGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----S----------------VGK-------------- 203 (315)
Q Consensus 158 ~~~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g----------------~G~-------------- 203 (315)
. ......+.++.|+.+.|.|||+|+|+|++++|.+.+.+.| | .|.
T Consensus 126 ~-~~~~~~~~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~ 204 (397)
T PRK14281 126 R-RRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVN 204 (397)
T ss_pred c-cccccCCCCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEE
Confidence 0 0000112468899999999999999999999998755421 1 111
Q ss_pred -------------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeec
Q 038604 204 -------------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRD 257 (315)
Q Consensus 204 -------------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~ 257 (315)
++.++++++|.||+|+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+
T Consensus 205 ~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~ 284 (397)
T PRK14281 205 ITACPTCGGEGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRN 284 (397)
T ss_pred EEecCCCcceeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEe
Confidence 23456799999999999999999999999965 5678999999999999999999
Q ss_pred CCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 258 GNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 258 g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
|+||+++++|||.|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 285 G~DL~~~~~Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~G~~~ri~g~G~P~~~ 339 (397)
T PRK14281 285 GDDVIYNLAVSYPDLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLR 339 (397)
T ss_pred cCCEEEEEEecHHHHhcCCeEEeecCCcc-EEEEeCCccCCCcEEEEcCCCCCCCC
Confidence 99999999999999999999999999997 89999999999999999999999643
No 20
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.8e-56 Score=421.90 Aligned_cols=259 Identities=34% Similarity=0.591 Sum_probs=211.6
Q ss_pred CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCC
Q 038604 1 MG-FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGT 79 (315)
Q Consensus 1 m~-~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~ 79 (315)
|. .|||+||||+++|+.+|||+|||+||++||||+++. +++++++|++|++||+||+||.+|+.||+||++++.++
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~- 77 (366)
T PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPG--DKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGT- 77 (366)
T ss_pred CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--chHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCC-
Confidence 53 799999999999999999999999999999999975 35788999999999999999999999999999877531
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCC
Q 038604 80 VPTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTA 159 (315)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 159 (315)
+++ ++++|. . .| .++.|+|++|||.+. ++ . + .
T Consensus 78 ---~~~-------~~~~~~------~--~~--~~~~d~f~~~fg~g~----~~-~----~-~------------------ 109 (366)
T PRK14294 78 ---GFS-------GFSGFD------D--IF--SSFGDIFEDFFGFGG----GR-R----G-R------------------ 109 (366)
T ss_pred ---CCC-------CcCccc------c--ch--hhhhhhHHHhhccCC----Cc-C----C-c------------------
Confidence 100 000110 0 01 146789999997210 00 0 0 0
Q ss_pred CCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC---------------------------------
Q 038604 160 SGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG--------------------------------- 202 (315)
Q Consensus 160 ~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G--------------------------------- 202 (315)
......+++|+.+.|.|||+|+|+|++++|.+.+.+.| |+|
T Consensus 110 --~~~~~~~g~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~ 187 (366)
T PRK14294 110 --SRTAVRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCP 187 (366)
T ss_pred --ccCCCCCCCCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCC
Confidence 00113468899999999999999999999988754321 111
Q ss_pred -------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCCeE
Q 038604 203 -------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGNDLV 262 (315)
Q Consensus 203 -------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~dL~ 262 (315)
.++.+.++++|.||+|+++|++|+|+|+|++. .++.+|||+|+|++++|+.|+|+|+||+
T Consensus 188 ~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~ 267 (366)
T PRK14294 188 RCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVH 267 (366)
T ss_pred CCCCcCeecCcCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEE
Confidence 13556789999999999999999999999985 5677899999999999999999999999
Q ss_pred EEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 263 VGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 263 ~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
++++|||.+||+|+++.|+||||+ +.|.||+++++|++++|+|+|||..+
T Consensus 268 ~~~~Isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~~ 317 (366)
T PRK14294 268 CKVPISFVQAALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSLR 317 (366)
T ss_pred EEEEeCHHHHhCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCCC
Confidence 999999999999999999999997 79999999999999999999999653
No 21
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1e-55 Score=420.87 Aligned_cols=260 Identities=30% Similarity=0.545 Sum_probs=211.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++|+.+|||+|||+||++||||+|+. +++|+++|++|++||++|+||.+|+.||+||++++..+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~-- 78 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKG--NKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG-- 78 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC--
Confidence 4799999999999999999999999999999999975 367899999999999999999999999999998775321
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCC-CChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNP-RDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
+.+. +++.+ +.+.. .++.|+|++|||+. + ++. + .
T Consensus 79 -~~~~-----~~~~~----------~~~~~~~~~~d~f~~~fgg~--~--g~~-----~-~------------------- 113 (380)
T PRK14297 79 -GFGS-----GGFGG----------FDFSDMGGFGDIFDSFFGGG--F--GSS-----S-R------------------- 113 (380)
T ss_pred -CCCC-----CCCCC----------cCcccccchhHHHHHHhccC--c--ccc-----c-c-------------------
Confidence 0000 01111 11110 24689999999841 1 000 0 0
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----C-----------------CCc----------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----S-----------------VGK---------------- 203 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g-----------------~G~---------------- 203 (315)
+....++++|+.+.|.|||+|+|+|++++|.+.+.+.| | .|.
T Consensus 114 -~~~~~~kg~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~ 192 (380)
T PRK14297 114 -RRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTT 192 (380)
T ss_pred -ccCCCCCCCCEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEE
Confidence 00113468899999999999999999999988754321 1 111
Q ss_pred -----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEEEEecCCCCeeecCC
Q 038604 204 -----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFIVDEKPHALYRRDGN 259 (315)
Q Consensus 204 -----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~i~v~~h~~f~R~g~ 259 (315)
++.+.++++|.||||+.+|++|+|+|+|++.+ +..+|||||+|++++|+.|+|+|+
T Consensus 193 ~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~ 272 (380)
T PRK14297 193 TCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGF 272 (380)
T ss_pred eCCCCCCCceEcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCC
Confidence 24567899999999999999999999999854 566899999999999999999999
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
||+++++|||++||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..
T Consensus 273 DL~~~~~Isl~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~p~~ 324 (380)
T PRK14297 273 DIYIDKHISFAKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGVPRV 324 (380)
T ss_pred CEEEEEEeCHHHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCcCCC
Confidence 999999999999999999999999997 8999999999999999999999964
No 22
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.6e-55 Score=404.19 Aligned_cols=250 Identities=37% Similarity=0.642 Sum_probs=202.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|++ +.++++|++|++||++|+|+.+|+.||+||++++..+...
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~ 79 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS---PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQG 79 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccC
Confidence 5899999999999999999999999999999999975 6788999999999999999999999999999865432110
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+..++ +++.+|. ++.+ .++.|+|++|||+...+ ++ .. +.|..
T Consensus 80 ~~~~~-----~~~~~~~-------~~~~--~~~~d~f~~~fgg~~~~--~~-------~g------~~~~~--------- 121 (291)
T PRK14299 80 PPPGP-----PGGGDFS-------GFNV--GDFSDFFQQLFGGRGGF--GG-------FG------DLFGS--------- 121 (291)
T ss_pred CCCCC-----CCCCCcc-------ccCc--CCHHHHHHHHhCCCCCC--CC-------cc------ccccc---------
Confidence 00000 0111111 1111 36789999999842111 00 00 00100
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCc
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAAD 241 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GD 241 (315)
.....+++.|+++.+.|||+|++.||++++.+. | ++++|+||||+++|++|+|+|+|++. ||
T Consensus 122 ~~~~~~~g~dl~~~l~isL~ea~~G~~~~i~l~-------g------~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GD 183 (291)
T PRK14299 122 VGRRARKGRDLEAELPLTLEEAYRGGEKVVEVA-------G------ERLSVRIPPGVREGQVIRLAGKGRQG-----GD 183 (291)
T ss_pred ccCCCCCCCCEEEEEEecHHHHhCCCeEEEeeC-------C------EEEEEecCCCcCCCcEEEECCCCCCC-----CC
Confidence 001235688999999999999999999998763 4 58999999999999999999999963 99
Q ss_pred EEEEEEecCCCCeeecCCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCC
Q 038604 242 LIFIVDEKPHALYRRDGNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPI 311 (315)
Q Consensus 242 L~v~i~v~~h~~f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~ 311 (315)
|+|+|++++|+.|+|+|+||+++++|||.+||||+++.|+||||+ +.|+||+++++|++++|+|+|||.
T Consensus 184 L~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~ 252 (291)
T PRK14299 184 LYLVVRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPR 252 (291)
T ss_pred EEEEEEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCC
Confidence 999999999999999999999999999999999999999999997 899999999999999999999995
No 23
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-55 Score=417.85 Aligned_cols=256 Identities=36% Similarity=0.599 Sum_probs=208.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|+. .++|+++|++|++||++|+|+.+|+.||+||++++..+..
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPG--DKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--cHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCC-
Confidence 4799999999999999999999999999999999975 2568899999999999999999999999999987653210
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+ ++++++ .+ |. ..+.++|+.|||++ ++ .
T Consensus 80 -~--------~~~~~~-------~~--~~-~~f~~~f~~~fgg~-----~~-~--------------------------- 107 (371)
T PRK10767 80 -G--------GGFGGG-------GG--FG-DIFGDIFGDIFGGG-----RG-G--------------------------- 107 (371)
T ss_pred -C--------CCCCCc-------cc--cc-cchhhhhhhhccCC-----cc-c---------------------------
Confidence 0 011000 01 11 12567777777631 00 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCCC-----------------------------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSVG----------------------------------- 202 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~G----------------------------------- 202 (315)
.....+++.|+.+.|.|||+|+|+|++++|.+.+.+. +|+|
T Consensus 108 ~~~~~~~g~di~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C 187 (371)
T PRK10767 108 GRQRARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTC 187 (371)
T ss_pred cCCCCCCCCCeEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCC
Confidence 0011346889999999999999999999998865432 1111
Q ss_pred -----------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCCeEEE
Q 038604 203 -----------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGNDLVVG 264 (315)
Q Consensus 203 -----------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~dL~~~ 264 (315)
.++.+.++++|.||||+.+|++|+|+|+|++. ++..+|||+|+|++++|+.|+|+|+||+++
T Consensus 188 ~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~ 267 (371)
T PRK10767 188 HGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCE 267 (371)
T ss_pred CCceeECCCCCCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEE
Confidence 13566789999999999999999999999984 566789999999999999999999999999
Q ss_pred EeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 265 QEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 265 ~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+.|||++||+|+++.|+||||. +.|+||+++++|++++|+|+|||..+
T Consensus 268 ~~Isl~eAl~G~~~~i~~ldG~-i~v~ip~g~~~g~~~~i~g~G~p~~~ 315 (371)
T PRK10767 268 VPISFTTAALGGEIEVPTLDGR-VKLKIPEGTQTGKLFRLRGKGVKSVR 315 (371)
T ss_pred EEeCHHHHhCCCeEEEecCCCc-EEEEeCCCCCCCCEEEECCCCcCCCC
Confidence 9999999999999999999995 99999999999999999999999753
No 24
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.3e-55 Score=415.36 Aligned_cols=264 Identities=33% Similarity=0.553 Sum_probs=212.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++||.+|||+|||+||++||||+++. +.++|.++|++|++||++|+|+.+|+.||+||+.++..+
T Consensus 1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~-- 77 (365)
T PRK14290 1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPG-NKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAG-- 77 (365)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-chhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccC--
Confidence 77899999999999999999999999999999999976 234789999999999999999999999999999866421
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
+ +++ ++.+| .. + .++.|+|++|||+. + ++ . .|+.. +
T Consensus 78 --~-~~~-----~~~~~-------~~--~--~~~~d~f~~~fg~~--~--~~------~---------~~~~~--~---- 113 (365)
T PRK14290 78 --G-SNF-----NWDNF-------TH--F--SDINDIFNQIFGGN--F--GS------D---------FFSGF--G---- 113 (365)
T ss_pred --C-CCc-----ccccc-------cc--c--cchhHHHHHHhcCc--c--cc------c---------ccccc--c----
Confidence 0 000 00001 00 1 25789999999841 1 00 0 00000 0
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----C----------------CC------------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----S----------------VG------------------ 202 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g----------------~G------------------ 202 (315)
......++++|+.+.|.|||+|+|+|++++|.+.+.+.| | .|
T Consensus 114 ~~~~~~~~~~di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~ 193 (365)
T PRK14290 114 NQQSTRNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTT 193 (365)
T ss_pred cccCCCCCCCCEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEe
Confidence 001112347899999999999999999999988654321 1 11
Q ss_pred ---------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCCCe
Q 038604 203 ---------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGNDL 261 (315)
Q Consensus 203 ---------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~dL 261 (315)
.++.+.++++|.||||+.+|++|+|+|+|+. +++.+|||||+|++++|+.|+|+|+||
T Consensus 194 C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL 272 (365)
T PRK14290 194 CRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDL 272 (365)
T ss_pred CCCCCCceeEccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCE
Confidence 1355678999999999999999999999996 678899999999999999999999999
Q ss_pred EEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 262 VVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 262 ~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++++|||.+||+|+++.|+|++|+ +.|+||+++++|++++|+|+|||..+
T Consensus 273 ~~~~~Isl~eAl~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~G~p~~~ 323 (365)
T PRK14290 273 YVDQKINFPQAALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGAGMPHLN 323 (365)
T ss_pred EEEEEeCHHHHhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCCCCCCCC
Confidence 9999999999999999999999996 99999999999999999999999643
No 25
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.2e-55 Score=413.73 Aligned_cols=262 Identities=30% Similarity=0.522 Sum_probs=210.2
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++||.+|||+|||+||++||||+++. +.++++|++|++||++|+|+.+|+.||+||++++.....
T Consensus 1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 77 (372)
T PRK14300 1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA---KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQS 77 (372)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccc
Confidence 78999999999999999999999999999999999975 568889999999999999999999999999987653210
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
.++ . +++++| . .++.++|++||+.. | ++ + + . ..
T Consensus 78 ~~~--~-----g~~~~~------------~-~~~~~~f~~~f~~~--~--gg-~----~-~--------~~--------- 110 (372)
T PRK14300 78 RGG--G-----GNHGGF------------H-PDINDIFGDFFSDF--M--GG-S----R-R--------SR--------- 110 (372)
T ss_pred cCC--C-----CCCCcc------------c-cchhhhHHHHHHhh--c--CC-C----C-C--------CC---------
Confidence 000 0 000011 1 12345666666520 1 00 0 0 0 00
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC----------------------------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG---------------------------------- 202 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G---------------------------------- 202 (315)
....+.++.|+.+.|.|||+|+|+|++++|.+.+.+.| |+|
T Consensus 111 -~~~~~~~g~di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~ 189 (372)
T PRK14300 111 -PTSSKVRGSDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHK 189 (372)
T ss_pred -CCcCCCCCCCeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCC
Confidence 00012467899999999999999999999998765322 211
Q ss_pred ------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCCeEE
Q 038604 203 ------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGNDLVV 263 (315)
Q Consensus 203 ------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~dL~~ 263 (315)
.++.+.++++|.||+|+++|++|+|+|+|++. ++..+|||+|+|++++|+.|+|+|+||++
T Consensus 190 C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~ 269 (372)
T PRK14300 190 CQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHC 269 (372)
T ss_pred CCccceEeCCCCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEE
Confidence 03567789999999999999999999999985 56778999999999999999999999999
Q ss_pred EEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 264 GQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 264 ~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++|+|++||+|+++.|+||||+.+.|+||+++++|++++|+|+|||..+
T Consensus 270 ~~~Isl~~Al~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~ 319 (372)
T PRK14300 270 KLPISFVNAALGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMR 319 (372)
T ss_pred EEecCHHHHhCCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCC
Confidence 99999999999999999999998899999999999999999999999753
No 26
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=8.3e-54 Score=396.97 Aligned_cols=258 Identities=27% Similarity=0.425 Sum_probs=212.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
-..|||+||||+++||.+|||+|||+||++||||+++. +.+.++|++|++||++|+|+.+|+.||+||......+..
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~---~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~ 78 (306)
T PRK10266 2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE---PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFN 78 (306)
T ss_pred CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCcccc
Confidence 03799999999999999999999999999999999875 578999999999999999999999999998642110100
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
. + . + ++ ++.. +...++.++|+.|||+. ++..
T Consensus 79 ~-~--~------~---~~----~~~~--~~~~~~~~~f~~~~g~~-----~~~~-------------------------- 109 (306)
T PRK10266 79 R-Q--F------Q---HG----DGQS--FNAEDFDDIFSSIFGQH-----ARQS-------------------------- 109 (306)
T ss_pred c-c--c------c---cC----CCCC--CCCCCHHHHHHHHhCCC-----CCCC--------------------------
Confidence 0 0 0 0 00 0001 11236889999999841 0000
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeE-EEEEEEEeCCCCCCCCEEEecCCCCCCC-CCC
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTV-EEILTVEIKPGWKKGTKITFPEKGNQEP-GII 238 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~ 238 (315)
.....+++.|+.+.+.|||+|++.||.+++.+.+.+|++.|.+..+ .++++|.||+|+++|++|+|+|+|++.+ +..
T Consensus 110 -~~~~~~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~ 188 (306)
T PRK10266 110 -RQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGP 188 (306)
T ss_pred -CCCCCCCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCC
Confidence 0011346789999999999999999999999999999877743222 3689999999999999999999999854 567
Q ss_pred CCcEEEEEEecCCCCeeecCCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 239 AADLIFIVDEKPHALYRRDGNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 239 ~GDL~v~i~v~~h~~f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
+|||+|+|+++||+.|+|+|+||+++++|||++|++|+++.|+|++|+ +.|+||+++++|++++|+|+|||..
T Consensus 189 ~GDl~v~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~ 261 (306)
T PRK10266 189 NGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSK 261 (306)
T ss_pred CccEEEEEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCC
Confidence 899999999999999999999999999999999999999999999998 8999999999999999999999964
No 27
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=6.3e-54 Score=405.78 Aligned_cols=259 Identities=34% Similarity=0.606 Sum_probs=210.5
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCCCC
Q 038604 4 DYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVPTS 83 (315)
Q Consensus 4 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~ 83 (315)
|||+||||+++|+.+|||+|||+||++||||+++. +++.++|++|++||++|+|+.+|+.||+||++++..+.. +
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~--~ 75 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD---KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGG--G 75 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCc--C
Confidence 79999999999999999999999999999999974 668899999999999999999999999999987653210 0
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCCCC
Q 038604 84 STSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASGGA 163 (315)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 163 (315)
.+ +++.++.. . .| .++.|+|++|||+.. +. +.. ..
T Consensus 76 -~~-----~~~~~~~~-----~--~~--~~~~~~f~~~fg~~~-----g~-----~~~--------------------~~ 110 (354)
T TIGR02349 76 -GG-----GGFNGFDI-----G--FF--GDFGDIFGDFFGGGG-----GS-----GRR--------------------RR 110 (354)
T ss_pred -CC-----CCcCCccc-----c--Cc--CchhhhHHHHhccCc-----cc-----Ccc--------------------cc
Confidence 00 01111100 0 12 246799999998420 00 000 01
Q ss_pred cccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cCCC-------------------------------------
Q 038604 164 AEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DSVG------------------------------------- 202 (315)
Q Consensus 164 ~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g~G------------------------------------- 202 (315)
...++++|+.+.|.|||+|+|+|+++++.+.+.+. +|+|
T Consensus 111 ~~~~~~~d~~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~ 190 (354)
T TIGR02349 111 SGPRRGEDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCP 190 (354)
T ss_pred CCCCCCCCeEEEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecC
Confidence 12356889999999999999999999998875532 1211
Q ss_pred -------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCCCeE
Q 038604 203 -------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGNDLV 262 (315)
Q Consensus 203 -------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~dL~ 262 (315)
.++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+|+||+
T Consensus 191 ~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~ 270 (354)
T TIGR02349 191 TCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLY 270 (354)
T ss_pred CCCCcceecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEE
Confidence 13456689999999999999999999999985 4567899999999999999999999999
Q ss_pred EEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 263 VGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 263 ~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
+++.|||+|||+|+++.|+|||| ++.|+||+++++|++++|+|+|||..+
T Consensus 271 ~~~~isl~eAl~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~ 320 (354)
T TIGR02349 271 IEVPISFTQAILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLR 320 (354)
T ss_pred EEEEeCHHHHhCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcCCCC
Confidence 99999999999999999999999 599999999999999999999999754
No 28
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-53 Score=406.39 Aligned_cols=256 Identities=30% Similarity=0.533 Sum_probs=202.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||++|+|+.+|++||+||++++......
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~~ 80 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQE 80 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHHHHHHhhhccccccccccc
Confidence 4799999999999999999999999999999999975 6789999999999999999999999999999876421000
Q ss_pred CCCCCCCCCCCCCc-cccCCCCCCCCCCCCCCChHHHHHHh-hCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCC
Q 038604 82 TSSTSTSASRAGQH-YYHQRQHPNPSFRFNPRDAEDIYEEL-FGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTA 159 (315)
Q Consensus 82 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~f~~~-fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 159 (315)
+.++. .++. .|+ . |. .++.++|..| |++.
T Consensus 81 ~~~~~-----~~~~~~~~-------~--~~-~~~~~~f~~~~fgg~---------------------------------- 111 (378)
T PRK14283 81 DIFNN-----INFEDIFQ-------G--FG-FGIGNIFDMFGFGGG---------------------------------- 111 (378)
T ss_pred ccccc-----cCcccccc-------c--cc-cchhhhccccccCCC----------------------------------
Confidence 00000 0000 000 0 00 0122333332 2210
Q ss_pred CCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CC-----------------Cc---------------
Q 038604 160 SGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SV-----------------GK--------------- 203 (315)
Q Consensus 160 ~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~-----------------G~--------------- 203 (315)
+...+.++.|+.+.|.|||+|+|+|+++++.+.+.+.| |+ |.
T Consensus 112 --~~~~~~kg~di~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~ 189 (378)
T PRK14283 112 --SRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNV 189 (378)
T ss_pred --CCCCccCCCCeEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEE
Confidence 00112467899999999999999999999988765321 11 10
Q ss_pred ------------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecC
Q 038604 204 ------------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDG 258 (315)
Q Consensus 204 ------------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g 258 (315)
++.+.++++|.||||+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+|
T Consensus 190 ~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G 269 (378)
T PRK14283 190 TTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREG 269 (378)
T ss_pred EECCCCCccceecCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEec
Confidence 2445688999999999999999999999985 356789999999999999999999
Q ss_pred CCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 259 NDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 259 ~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
+||+++++|||.+|++|+++.|+|||| ++.|+||+++++|++++|+|+|||..
T Consensus 270 ~DL~~~~~Isl~eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G~p~~ 322 (378)
T PRK14283 270 ANLYYEKPISFVQAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMPSL 322 (378)
T ss_pred CCEEEEEecCHHHHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCCCCCC
Confidence 999999999999999999999999999 59999999999999999999999964
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-53 Score=403.97 Aligned_cols=259 Identities=32% Similarity=0.546 Sum_probs=209.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||+||||+++||.+|||+|||+||++||||+|+. +.++++|++|++||++|+||.+|+.||.||++++.++.
T Consensus 1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~- 76 (374)
T PRK14293 1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE---PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAA- 76 (374)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCC-
Confidence 78899999999999999999999999999999999975 56889999999999999999999999999988764210
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTAS 160 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 160 (315)
++++ + .+ + .++.|+|++||++ + ++.+ + .+ +.
T Consensus 77 --~~~~----------~-------~~--~--~~~~d~f~~~fg~---~--~~~~----~-~~-------~~--------- 107 (374)
T PRK14293 77 --GFPD----------M-------GD--M--GGFADIFETFFSG---F--GGAG----G-QG-------GR--------- 107 (374)
T ss_pred --CcCC----------c-------cc--c--cchHHHHHHHhcc---c--CCCC----C-CC-------cc---------
Confidence 0000 0 00 1 1357899999973 1 0000 0 00 00
Q ss_pred CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEE----cC-----------------CCc----------------
Q 038604 161 GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVY----DS-----------------VGK---------------- 203 (315)
Q Consensus 161 ~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~----~g-----------------~G~---------------- 203 (315)
.+.....+++++.+.|.|||+|+|+|+++++.+.+.+. .| .|.
T Consensus 108 ~~~~~~~kg~di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~ 187 (374)
T PRK14293 108 RRRRGPQRGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVS 187 (374)
T ss_pred ccccCccCCCCeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEe
Confidence 00111346789999999999999999999998875431 11 111
Q ss_pred -----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeecCC
Q 038604 204 -----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRDGN 259 (315)
Q Consensus 204 -----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~g~ 259 (315)
++.+.++++|.||||+++|++|+|+|+|++. ++..+|||+|+|++++|+.|+|+|+
T Consensus 188 ~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~ 267 (374)
T PRK14293 188 ECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGI 267 (374)
T ss_pred eCCCCCcceeEeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhh
Confidence 2345578899999999999999999999985 4566899999999999999999999
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
||+++++|||.|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 268 DL~~~~~Isl~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~~ 320 (374)
T PRK14293 268 NILSEIKISYLQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLG 320 (374)
T ss_pred ceEEEeccCHHHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCCC
Confidence 999999999999999999999999997 89999999999999999999999754
No 30
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.2e-53 Score=399.82 Aligned_cols=254 Identities=31% Similarity=0.504 Sum_probs=208.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
++|||+||||+++||.++||+|||+||++||||++++ +++.++|++|++||++|+||.+|+.||+||+++..+.
T Consensus 1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~---~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~--- 74 (371)
T PRK14292 1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE---KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM--- 74 (371)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc---
Confidence 4699999999999999999999999999999999975 6789999999999999999999999999998753210
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+ ++ ++ | .++.| ++.|+|++|||+. .+ ++ . +
T Consensus 75 -~-~~-----~~---~-------~~~~~---d~~d~f~~~fg~~-~~--~~------~----------~----------- 104 (371)
T PRK14292 75 -P-GG-----DP---F-------GGMGF---DPMDIFEQLFGGA-GF--GG------G----------R----------- 104 (371)
T ss_pred -c-CC-----cc---c-------CccCC---ChHHHHHHhhCCC-Cc--CC------C----------C-----------
Confidence 0 00 00 1 01112 5679999999842 11 00 0 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CC------------------Cc----------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SV------------------GK---------------- 203 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~------------------G~---------------- 203 (315)
......++.|+.+.+.|||+|+++|+++++.+.+.+.| |+ |.
T Consensus 105 ~~~~~~~g~d~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~ 184 (371)
T PRK14292 105 GRRGPARGDDLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQ 184 (371)
T ss_pred CcccccCCCCeEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEee
Confidence 00113468899999999999999999999998764321 11 10
Q ss_pred -----------------------EEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCCC
Q 038604 204 -----------------------TRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGND 260 (315)
Q Consensus 204 -----------------------~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~d 260 (315)
++.+.++++|.||+|+.+|++|+|+|+|++.+++. |||||+|++++|+.|+|+|+|
T Consensus 185 ~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v~i~v~~h~~f~r~g~d 263 (371)
T PRK14292 185 PCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYVHIEMEPHPELRREQEH 263 (371)
T ss_pred ecCCCcccceecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEEEEEEecCCccccchhc
Confidence 23456789999999999999999999999976665 999999999999999999999
Q ss_pred eEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCC
Q 038604 261 LVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISK 313 (315)
Q Consensus 261 L~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~ 313 (315)
|+++++|+|.+||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+
T Consensus 264 L~~~~~isl~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~ 315 (371)
T PRK14292 264 LIYEARIGFAKAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQ 315 (371)
T ss_pred eeEEeccCHHHHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCC
Confidence 99999999999999999999999998 58999999999999999999999753
No 31
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.6e-52 Score=395.24 Aligned_cols=263 Identities=34% Similarity=0.611 Sum_probs=206.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
..|||+||||+++|+.+|||+|||+||++||||+|+. ++++.++|++|++||++|+||.+|+.||+||+++++.+.
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~-- 79 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPG--DKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAA-- 79 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCC--
Confidence 5799999999999999999999999999999999975 367899999999999999999999999999998764321
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHH---hhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEE---LFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSST 158 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~---~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 158 (315)
+. ++ |. +.. .++.++|+. +|++. + ++.. +.. .|...
T Consensus 80 -~~-------~~---~~-----~~~-----~~~~~~f~~f~~~fg~~--~--gg~~----~~~-------~~~~~----- 118 (386)
T PRK14289 80 -GG-------GG---FS-----GEG-----MSMEDIFSMFGDIFGGH--G--GGFG----GFG-------GFGGG----- 118 (386)
T ss_pred -CC-------CC---CC-----CCC-----cChhhhhHHhhhhhccc--c--cCcc----ccc-------ccccc-----
Confidence 00 00 10 001 123444443 35421 0 0000 000 00000
Q ss_pred CCCCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC--------------------------------
Q 038604 159 ASGGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG-------------------------------- 202 (315)
Q Consensus 159 ~~~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G-------------------------------- 202 (315)
.......++.|+.+.|.|||+|+|+|++++|.+.+.+.| |+|
T Consensus 119 --~~~~~~~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~ 196 (386)
T PRK14289 119 --GSQQRVFRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQT 196 (386)
T ss_pred --cccCCCCCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEE
Confidence 001123468899999999999999999999998765422 111
Q ss_pred ------------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEEEEecCCCCeeec
Q 038604 203 ------------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFIVDEKPHALYRRD 257 (315)
Q Consensus 203 ------------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~i~v~~h~~f~R~ 257 (315)
.++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+
T Consensus 197 ~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~ 276 (386)
T PRK14289 197 QSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRD 276 (386)
T ss_pred EEecCCCCccccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCccccc
Confidence 13556788999999999999999999999986 46678999999999999999999
Q ss_pred CCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 258 GNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 258 g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
++||++++.|||.+||+|+++.|+|+||+ +.|+||+++++|+++||+|+|||..
T Consensus 277 g~DL~~~~~Isl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~ 330 (386)
T PRK14289 277 ENDLIYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSV 330 (386)
T ss_pred ccceeEEeccCHHHHhCCCeEEeecCCce-EEEEECCccCCCcEEEECCCCcCCC
Confidence 99999999999999999999999999997 8999999999999999999999964
No 32
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.2e-52 Score=379.53 Aligned_cols=244 Identities=43% Similarity=0.737 Sum_probs=208.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
+..||+||||+++||.+|||+|||+||++||||+||+ +.++|++|++||||||||++|++||+||+++++.+..+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~-----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~ 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD-----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc-----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC
Confidence 5689999999999999999999999999999999976 78999999999999999999999999999998643110
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+ + +. . |++||+. ++.+ +
T Consensus 78 ----~------------------g---~~--~----f~~~F~~------g~~~-------~------------------- 94 (337)
T KOG0712|consen 78 ----G------------------G---FG--G----FSQFFGF------GGNG-------G------------------- 94 (337)
T ss_pred ----C------------------C---Cc--c----HHHhccC------CCcC-------c-------------------
Confidence 0 0 00 1 7788872 1111 0
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEc----CCC-----------------------------------
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYD----SVG----------------------------------- 202 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~----g~G----------------------------------- 202 (315)
+...+++|+.+.+.|||+|+|.|.++++.++++.+| +.|
T Consensus 95 --~~~~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~ 172 (337)
T KOG0712|consen 95 --RGRQRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLV 172 (337)
T ss_pred --cccccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeE
Confidence 011238999999999999999999888887765432 111
Q ss_pred -----------------------cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCC
Q 038604 203 -----------------------KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGN 259 (315)
Q Consensus 203 -----------------------~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~ 259 (315)
+++.+.+.++|.|++|+.++++|.+.|++++.++..+||++|.|..++|+.|.|+|+
T Consensus 173 C~~C~G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~ 252 (337)
T KOG0712|consen 173 CDSCNGSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGS 252 (337)
T ss_pred eccCCCccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceeccc
Confidence 046677889999999999999999999999999888999999999999999999999
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecC--CCcCCCcEEEEcCCCcCCCCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLT--DIVKPGTEIVVPNEGMPISKEP 315 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~--~~~~~g~~~~i~g~G~P~~~~p 315 (315)
||++..+|+|.|||+|+.+.+.||||+.+.|.++ ++++|+++++|+|+|||+.++|
T Consensus 253 dL~~~~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~ 310 (337)
T KOG0712|consen 253 DLYRKLTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP 310 (337)
T ss_pred ccceeeecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC
Confidence 9999999999999999999999999999988875 4899999999999999998875
No 33
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=4.7e-40 Score=322.79 Aligned_cols=140 Identities=13% Similarity=0.164 Sum_probs=130.5
Q ss_pred ceEEEEeeehhhHhcCceeEEEEeeeEEcCCC-cEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEec
Q 038604 171 AVENLLPCSLEEIYKGAKKKMRISRNVYDSVG-KTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEK 249 (315)
Q Consensus 171 di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G-~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~ 249 (315)
+|.+.+.|+|+++|+||+++|++.|.+||+.| +++.+.++++|.||+|+++|++|+|+|+|+..+++. |||+|+|+++
T Consensus 658 dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVK 736 (871)
T TIGR03835 658 NLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVI 736 (871)
T ss_pred ceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEc
Confidence 56678999999999999999999999998776 356677899999999999999999999999876654 9999999999
Q ss_pred CCCCeeecCCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 250 PHALYRRDGNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 250 ~h~~f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
+|+.|+|+|+||+++++|+|.+||||+++.|+||||+ +.|+|++++++|+++||+|+|||..
T Consensus 737 PHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~ 798 (871)
T TIGR03835 737 PSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKT 798 (871)
T ss_pred CCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCC
Confidence 9999999999999999999999999999999999997 8999999999999999999999953
No 34
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-40 Score=297.17 Aligned_cols=255 Identities=35% Similarity=0.560 Sum_probs=201.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVP 81 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 81 (315)
++|||+||||+++||..|||+||||||++||||+||+ ++.|.++|++|+.||||||||++|+.||+||++++....-.
T Consensus 15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpd--dp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~ 92 (336)
T KOG0713|consen 15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPD--DPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKD 92 (336)
T ss_pred CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccc
Confidence 5899999999999999999999999999999999997 58999999999999999999999999999999998743100
Q ss_pred CCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCCCCC
Q 038604 82 TSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSSTASG 161 (315)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 161 (315)
+ . ++ +. -.++|+.||+. | +. . ++...
T Consensus 93 -~--~-----~g----------~~--------~~~~f~~~f~d---f--g~-~---------------~~g~~------- 118 (336)
T KOG0713|consen 93 -G--E-----GG----------GG--------GNDIFSAFFGD---F--GV-T---------------VGGNP------- 118 (336)
T ss_pred -c--c-----cC----------Cc--------ccchHHHhhcc---c--cc-c---------------cCCCc-------
Confidence 0 0 00 00 04778888773 1 00 0 00000
Q ss_pred CCcccccCCceEEEEeeehhhHhcCceeE------EEEee----eEEc---------CCC----------------cEEe
Q 038604 162 GAAEFKKAPAVENLLPCSLEEIYKGAKKK------MRISR----NVYD---------SVG----------------KTRT 206 (315)
Q Consensus 162 ~~~~~~~~~di~~~l~vsl~e~~~G~~k~------i~~~r----~~~~---------g~G----------------~~~~ 206 (315)
......++.++...++.+++++|.+...+ +...+ ..+| +.| +...
T Consensus 119 ~~e~~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~ 198 (336)
T KOG0713|consen 119 LEEALPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVL 198 (336)
T ss_pred ccCCCCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceee
Confidence 01113456677788888888887775321 11111 1100 011 2467
Q ss_pred EEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCCCeEEEEeeCHHHHHcCCeEEEecCCCc
Q 038604 207 VEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGNDLVVGQEITLLEALTGKTLDLTTLDGR 286 (315)
Q Consensus 207 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~ 286 (315)
++..+++.+..|+..+....+..+|.+..-+.+||+.+.+..-+|+.|.|+++||++++.|++.+++.|+...+.++|+.
T Consensus 199 e~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~ 278 (336)
T KOG0713|consen 199 EEDPLEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGH 278 (336)
T ss_pred cCCceeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchh
Confidence 78899999999999999999999999988889999999999999999999999999999999999999999999999998
Q ss_pred EEEEecCCCcCCCcEEEEcCCCcCCC
Q 038604 287 NLMIPLTDIVKPGTEIVVPNEGMPIS 312 (315)
Q Consensus 287 ~~~i~i~~~~~~g~~~~i~g~G~P~~ 312 (315)
.+.+....+..|+..++.+++|||..
T Consensus 279 ~~~~~r~~~~~p~~~~~~~~~~~~~l 304 (336)
T KOG0713|consen 279 YVEVSRKKITWPGARTRKKGEGMPLL 304 (336)
T ss_pred hhhhhhhhccccchhhhhhhccchhh
Confidence 88888888899999999999999953
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=3.1e-29 Score=229.35 Aligned_cols=221 Identities=29% Similarity=0.459 Sum_probs=146.5
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCCCCC
Q 038604 4 DYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTVPTS 83 (315)
Q Consensus 4 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~ 83 (315)
|||+||||+++|+..|||+||++||++||||.|.+ .++.++|++|.+|||+|+|+++|+.||.+|..+.. +
T Consensus 44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~---~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~------~ 114 (288)
T KOG0715|consen 44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKD---KEASKKFKEISEAYEILSDEEKRQEYDVYGLEQHG------E 114 (288)
T ss_pred chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCC---cchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccc------c
Confidence 89999999999999999999999999999999987 58999999999999999999999999999886510 0
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCC-CCCCCCCCCCCCCCCCC-CCccccccccC---------
Q 038604 84 STSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGS-ESNNNSGGQRGNNHNIR-GYSHREGLFRN--------- 152 (315)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~-~~~~~~~~~~~~~~~~~-~~~~~~~~f~~--------- 152 (315)
+ . .++.++|..+|+. .+... .+... ... ...+.++.++.
T Consensus 115 ----------~----------~------g~~~~~~~~~~~~~~~~~~-~~~~~---~~d~~~~f~~A~~g~~~~~~~~~~ 164 (288)
T KOG0715|consen 115 ----------F----------G------GNPFDVFLEFFGGKMNKRV-PDKDQ---YYDLSLDFKEAVRGSKKRISFNVL 164 (288)
T ss_pred ----------c----------c------CCccchHHHhhcccccccc-cCccc---ccccccCHHHHhhccccceEEEee
Confidence 0 0 1456677777765 11110 00000 000 00000001110
Q ss_pred CCCCCCCCCCCccccc--------CCceEE---EEeeeh--hhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCC
Q 038604 153 GNCSSTASGGAAEFKK--------APAVEN---LLPCSL--EEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGW 219 (315)
Q Consensus 153 ~~~~~~~~~~~~~~~~--------~~di~~---~l~vsl--~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~ 219 (315)
..|..|.+.+...-.+ +..... .-+..+ +..|.|....+.-.|..|.+.| .+...+.+.|.||+|+
T Consensus 165 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~-~v~~~k~i~i~~~~g~ 243 (288)
T KOG0715|consen 165 SDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAG-QVRRAKDIMIVLPAGV 243 (288)
T ss_pred cccccccCcCcccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcch-hhhhheeEEeecCccc
Confidence 1233343333211000 000000 000001 1123333333333344556677 6778899999999999
Q ss_pred CCCCEEEecCCCCCCCCCCCCcEEEEEEecCCCCeeecCCCeEEEEeeCHHH
Q 038604 220 KKGTKITFPEKGNQEPGIIAADLIFIVDEKPHALYRRDGNDLVVGQEITLLE 271 (315)
Q Consensus 220 ~~G~~i~~~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~dL~~~~~Isl~e 271 (315)
.++.+|++.+.|.. ||+|.+.|.+++.|+|+|.|+++++.|++.|
T Consensus 244 ~~~~~l~~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 244 RSADTLRFAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred ccccEEEEecCCcc-------eEEEEEEeccCcccccccCcccccccccccC
Confidence 99999999999874 9999999999999999999999999998764
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=4.1e-28 Score=222.80 Aligned_cols=291 Identities=48% Similarity=0.818 Sum_probs=216.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGTV 80 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 80 (315)
|..|||++|+|.++|+.++|++||+++|++||||+++.. ...+..+|++|.+||++|+|+.+|..||+||++++.+..
T Consensus 1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~- 78 (306)
T KOG0714|consen 1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGG- 78 (306)
T ss_pred CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHHhhhccccCccccccCC-
Confidence 789999999999999999999999999999999999885 456777999999999999999999999999996665411
Q ss_pred CCCCCCCCCCCCCCccccCCCCCCCCCCCCCCChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCC--CCCC
Q 038604 81 PTSSTSTSASRAGQHYYHQRQHPNPSFRFNPRDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGN--CSST 158 (315)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~ 158 (315)
.... .+. .+.+.+...++.++|.+|||...++....... ...+.......|.... ....
T Consensus 79 --~~~~---------~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 139 (306)
T KOG0714|consen 79 --SFSS---------SFT-----SELFYFLFRKPDKDFYEFFGVSSPFSGSKKGY---RDKNAAPGEEAFKSEGKAFQSL 139 (306)
T ss_pred --CCCC---------CCC-----CCcceeccCchhhhHHHHhCCCCCCccccccC---CccccccCcccccccccccccc
Confidence 0000 000 00111223467899999999766652110000 0000000000010000 0000
Q ss_pred CC---------CCCcccccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcE-EeEEEEEEEEeCCCCCCCCEEEec
Q 038604 159 AS---------GGAAEFKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKT-RTVEEILTVEIKPGWKKGTKITFP 228 (315)
Q Consensus 159 ~~---------~~~~~~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~-~~~~~~~~V~Ip~G~~~G~~i~~~ 228 (315)
.+ ......+....+...+.+++++++.++.+...+.+......+.. ......+.+.+.+++..|+.+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (306)
T KOG0714|consen 140 YGPKRKQYDSSGSDRSARQSPPVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFP 219 (306)
T ss_pred CCCcccccccccccccccCCCCccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceecc
Confidence 00 00011223334666677799999999999999998877655543 456778899999999999999999
Q ss_pred CCCCCCCCCCCCcEEEEEEecCCCCeeecCCCeEEE--EeeCHHHHHcCCeEEEecCCCcEEEEecC-CCcCCCcEEEEc
Q 038604 229 EKGNQEPGIIAADLIFIVDEKPHALYRRDGNDLVVG--QEITLLEALTGKTLDLTTLDGRNLMIPLT-DIVKPGTEIVVP 305 (315)
Q Consensus 229 g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~dL~~~--~~Isl~eal~G~~~~i~tldG~~~~i~i~-~~~~~g~~~~i~ 305 (315)
.+|+..++..+-++++.+..++|+.|.+.+++|... ..|++.+|++|+...++++++..+.+.+. ..+.++...+++
T Consensus 220 ~~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (306)
T KOG0714|consen 220 EEGDEEPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIP 299 (306)
T ss_pred ccccccCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeec
Confidence 999987777789999999999999999999999999 99999999999999999999998888887 889999999999
Q ss_pred CCCcCCC
Q 038604 306 NEGMPIS 312 (315)
Q Consensus 306 g~G~P~~ 312 (315)
++|||..
T Consensus 300 ~~~~~~~ 306 (306)
T KOG0714|consen 300 GEGLPCP 306 (306)
T ss_pred CCCCCCC
Confidence 9999963
No 37
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=1e-20 Score=166.71 Aligned_cols=74 Identities=51% Similarity=0.915 Sum_probs=69.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKS 77 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 77 (315)
..|+|+||||+++|+.++||||||+||++||||++++ ++++..+|++||+||+||+|+.+|..||.||+.++.-
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd--~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~l 103 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGD--NPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLKL 103 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCC--CchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHHH
Confidence 4689999999999999999999999999999999987 3889999999999999999999999999999987753
No 38
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=4.8e-20 Score=172.39 Aligned_cols=77 Identities=45% Similarity=0.780 Sum_probs=72.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSG 78 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~ 78 (315)
|++.||+||||.++|+..+||++||+|||+||||+||. .-++++++|+.|+.||+|||||+.|++||.+-++.|.+.
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd-~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~ 82 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPD-RIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK 82 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCc-cHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence 56889999999999999999999999999999999987 568999999999999999999999999999999887654
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=2.8e-18 Score=150.75 Aligned_cols=221 Identities=26% Similarity=0.376 Sum_probs=141.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcccc-ccccCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYG-EEGLKSGT 79 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G-~~~~~~~~ 79 (315)
|..+||+||||+++|+..||++|||++|++||||+++.... .+.++|+.|++||++|+|+.+|..||+++ ........
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~ 82 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKS 82 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCcccc
Confidence 45799999999999999999999999999999999986322 48999999999999999999999999985 22211100
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCCCCCCCC-CChHHHHHHhhCCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCC
Q 038604 80 VPTSSTSTSASRAGQHYYHQRQHPNPSFRFNP-RDAEDIYEELFGSESNNNSGGQRGNNHNIRGYSHREGLFRNGNCSST 158 (315)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~f~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 158 (315)
.. . ...++ ... ..+.+++...++...... .... ......... ...+........
T Consensus 83 ------~~----~-~~~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~-~~~~~~~~~~~~ 137 (237)
T COG2214 83 ------YR----E-SAAFP----------IEGSLQLTGLYEEWRGKRNKTE-RKAS--LADLLSRGL-SGLAAALSLFAD 137 (237)
T ss_pred ------cc----c-ccccc----------ccccccHHHHHHhhcccccccc-cccc--hhhhccccc-cccccccccccc
Confidence 00 0 00000 000 134555555554321100 0000 000000000 000000000000
Q ss_pred CCCCCcccccCC-ceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCC
Q 038604 159 ASGGAAEFKKAP-AVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGI 237 (315)
Q Consensus 159 ~~~~~~~~~~~~-di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~ 237 (315)
.. ......... ++...+.+++.+.+.+....+... .. ....+.+|.++..+..+++.+++.... .
T Consensus 138 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (237)
T COG2214 138 EA-ALRSGSLRRRDLAANLADNFEEALAGVKKAVARL------LG------KALKSTIKAGALEGKALRLKGLLKSAR-G 203 (237)
T ss_pred cc-ccccccccccceeeeeeccHHHHhcCcceeeecc------cc------ccccccCCcccccCceeeecccCCcCC-C
Confidence 00 000000111 577788899999998887777664 12 233489999999999999999998877 7
Q ss_pred CCCcEEEEEEecCCCCeeecCCCe
Q 038604 238 IAADLIFIVDEKPHALYRRDGNDL 261 (315)
Q Consensus 238 ~~GDL~v~i~v~~h~~f~R~g~dL 261 (315)
..++.+..+..++|+.|..++.++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~ 227 (237)
T COG2214 204 ALGKARLKELSKRHPPFALEGDDK 227 (237)
T ss_pred CcccceeeeeccCCCCccccCCcc
Confidence 789999999999999999999999
No 40
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=8.4e-20 Score=170.82 Aligned_cols=74 Identities=50% Similarity=0.973 Sum_probs=69.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNP-SHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLK 76 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~-~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 76 (315)
.|||.+|+|+++||.+|||+|||++++.|||||.- .+.++.|+++|+.|.+||||||||++|++||.||++|++
T Consensus 9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 48999999999999999999999999999999986 334678999999999999999999999999999999998
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.77 E-value=4.5e-19 Score=179.12 Aligned_cols=73 Identities=36% Similarity=0.640 Sum_probs=68.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCC
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKS 77 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 77 (315)
+.+||+||||+++||..+||+|||+||++||||+++. ..|.++|++|++||+|||||.+|+.||+||..++..
T Consensus 572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~---~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~ 644 (1136)
T PTZ00341 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSG---NEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644 (1136)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---chHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence 5799999999999999999999999999999999986 357889999999999999999999999999987653
No 42
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.76 E-value=3.8e-19 Score=153.21 Aligned_cols=72 Identities=43% Similarity=0.763 Sum_probs=68.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcccccc
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEE 73 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 73 (315)
.+|+|+||||.++|+..+|++||++||+.||||+++.+.+.+++.+|+.++.||.||+|.++|+.||+.|.-
T Consensus 13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i 84 (264)
T KOG0719|consen 13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI 84 (264)
T ss_pred ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence 469999999999999999999999999999999998767889999999999999999999999999998764
No 43
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.75 E-value=8.2e-19 Score=159.66 Aligned_cols=72 Identities=43% Similarity=0.822 Sum_probs=68.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcccccccc
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGL 75 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 75 (315)
+.|||+||||+.+|+..||++|||+.|++||||+||+ ++.|.++|+.+.+||+||+|+.+|..||.+|..+.
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~--dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~ 75 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPG--DPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGS 75 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCC--ChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcc
Confidence 5799999999999999999999999999999999998 46699999999999999999999999999988754
No 44
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.74 E-value=2.9e-18 Score=156.01 Aligned_cols=76 Identities=46% Similarity=0.808 Sum_probs=68.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc-hhHHHHHHHHHHHHHHhcCChhhhhhhccccccccCCCC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHK-RTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGLKSGT 79 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~ 79 (315)
+|||+||||.++|+..||.||||+||.+||||-..++. +..|+++|..|..|-|||+||++|+.||. |++-+....
T Consensus 394 RDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~Es 470 (504)
T KOG0624|consen 394 RDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDPES 470 (504)
T ss_pred chHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCChhh
Confidence 79999999999999999999999999999999987644 66799999999999999999999999997 777666543
No 45
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.74 E-value=1.6e-18 Score=123.86 Aligned_cols=64 Identities=48% Similarity=0.905 Sum_probs=59.6
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhc
Q 038604 4 DYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYD 68 (315)
Q Consensus 4 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD 68 (315)
|||+||||+++++.++||++|+++++++|||+++... ..+.+.|..|++||++|++|.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999987622 468899999999999999999999998
No 46
>PHA03102 Small T antigen; Reviewed
Probab=99.69 E-value=4.2e-17 Score=135.02 Aligned_cols=66 Identities=27% Similarity=0.374 Sum_probs=60.9
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcccccccc
Q 038604 4 DYYNILKVNRNA--NEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGL 75 (315)
Q Consensus 4 ~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 75 (315)
.+|+||||+++| |.++||+|||++|+++|||++++ .++|++|++||++|+|+.+|..||.+|.+..
T Consensus 6 ~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~------~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~ 73 (153)
T PHA03102 6 ELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD------EEKMKELNTLYKKFRESVKSLRDLDGEEDSS 73 (153)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch------hHHHHHHHHHHHHHhhHHHhccccccCCccc
Confidence 579999999999 99999999999999999999865 4699999999999999999999999987643
No 47
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.66 E-value=1.6e-16 Score=111.78 Aligned_cols=59 Identities=61% Similarity=1.045 Sum_probs=54.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChh
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQ 62 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~ 62 (315)
+|||+||||+++++.++||+||++|++.+|||+++.. .+.+.+.|.+|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCC
Confidence 4899999999999999999999999999999999742 4778999999999999999985
No 48
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=2.1e-16 Score=135.19 Aligned_cols=71 Identities=39% Similarity=0.764 Sum_probs=65.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccccccc
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEG 74 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 74 (315)
..|+||||||+++||.+|||+|||+|+++||||+++.. .+.++.|..|++||+.|+|+..|..|..||+..
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD 168 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD 168 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence 46999999999999999999999999999999999762 456778899999999999999999999999864
No 49
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.64 E-value=5.1e-16 Score=107.24 Aligned_cols=55 Identities=60% Similarity=1.059 Sum_probs=51.5
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCC
Q 038604 4 DYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSD 60 (315)
Q Consensus 4 ~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d 60 (315)
|||+||||+++++.++||++|++|+++||||+++.. +.+.+.|.+|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 799999999999999999999999999999999752 6788999999999999986
No 50
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.51 E-value=2.4e-14 Score=121.17 Aligned_cols=69 Identities=25% Similarity=0.428 Sum_probs=59.2
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc-hhHHHHHHHHHHHHHHhcCChhhhhhhccc
Q 038604 2 GFDYYNILKVNRN--ANEDDLKKAYKRLAMIWHPDKNPSHK-RTEAEAKFKQISEAYDVLSDPQKRQIYDLY 70 (315)
Q Consensus 2 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 70 (315)
+.|||++|||++. ++..+|+++||+|++++|||++.+.. +..+.+.+..||+||++|+||.+|+.|+..
T Consensus 1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~ 72 (166)
T PRK01356 1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLL 72 (166)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4699999999996 78999999999999999999986421 233456789999999999999999999763
No 51
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.50 E-value=3.6e-14 Score=120.74 Aligned_cols=67 Identities=30% Similarity=0.495 Sum_probs=58.6
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc---hhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 3 FDYYNILKVNRN--ANEDDLKKAYKRLAMIWHPDKNPSHK---RTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 3 ~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~---~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
+|||++|||++. ++..+|+++||+|++++|||+..... +..+.+.|..||+||++|+||.+|+.|+.
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999996 68899999999999999999976422 22367789999999999999999999985
No 52
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=1.5e-14 Score=126.36 Aligned_cols=65 Identities=38% Similarity=0.683 Sum_probs=61.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccc
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLY 70 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 70 (315)
.|+|+||||+++|+.+||.+|||+||++||||++++ ++..+.|+.|..|||+|.|...|..||-+
T Consensus 33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~---~e~k~~F~~iAtayeilkd~e~rt~ydya 97 (329)
T KOG0722|consen 33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD---PESKKLFVKIATAYEILKDNETRTQYDYA 97 (329)
T ss_pred hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC---chhhhhhhhhhcccccccchhhHHhHHHH
Confidence 589999999999999999999999999999999987 67779999999999999999999999963
No 53
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=5.3e-14 Score=130.99 Aligned_cols=66 Identities=55% Similarity=0.947 Sum_probs=63.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
.|||.||||.++|+..|||+|||++|+.||||++.. ++.+++.+|+++-+||.+|+|+.+|..||.
T Consensus 373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~ag-sq~eaE~kFkevgeAy~il~d~~kr~r~ds 438 (486)
T KOG0550|consen 373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAG-SQKEAEAKFKEVGEAYTILSDPMKRVRFDS 438 (486)
T ss_pred hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcc-hhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence 589999999999999999999999999999999987 468899999999999999999999999996
No 54
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.46 E-value=5.3e-14 Score=105.24 Aligned_cols=55 Identities=36% Similarity=0.603 Sum_probs=47.6
Q ss_pred CeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCcCCCCC
Q 038604 260 DLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGMPISKE 314 (315)
Q Consensus 260 dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~P~~~~ 314 (315)
||+++++|||+||++|++++|+|+||+.+.|++|+++++|++++|+|+|||....
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~ 55 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKG 55 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSS
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCC
Confidence 7999999999999999999999999988999999999999999999999997653
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=2.5e-13 Score=115.92 Aligned_cols=68 Identities=28% Similarity=0.397 Sum_probs=58.0
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc---hhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 2 GFDYYNILKVNRN--ANEDDLKKAYKRLAMIWHPDKNPSHK---RTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 2 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~---~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
..|||+||||++. ++..+|+++||+|++++|||++.... +..+.+.+..||+||++|+||.+|+.|+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4799999999995 68999999999999999999986422 12245567899999999999999999985
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.43 E-value=2.9e-13 Score=115.07 Aligned_cols=68 Identities=25% Similarity=0.382 Sum_probs=59.9
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc---hhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 2 GFDYYNILKVNRN--ANEDDLKKAYKRLAMIWHPDKNPSHK---RTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 2 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~---~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
..|||++|||++. .+..+|+++||+|++++|||++.... +..+.+.|..||+||++|+||.+|+.|+.
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 5799999999997 56899999999999999999986422 23467889999999999999999999986
No 57
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=2.7e-13 Score=127.54 Aligned_cols=65 Identities=42% Similarity=0.696 Sum_probs=62.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccc
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLY 70 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 70 (315)
.|.|.+|||++++|.++|||.||++|...|||||-. +.|++.|+.++.|||+|+|+.+|..||.-
T Consensus 235 ~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~---~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 235 LDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI---PRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred CCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC---hhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 689999999999999999999999999999999975 88999999999999999999999999973
No 58
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.38 E-value=4.4e-13 Score=105.55 Aligned_cols=51 Identities=29% Similarity=0.449 Sum_probs=46.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLS 59 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~ 59 (315)
.++|+||||+++||.+|||++||+|++++|||++.+ .+.|++|++||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs------~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS------TYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------HHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999654 467899999999985
No 59
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.31 E-value=1.2e-12 Score=122.56 Aligned_cols=74 Identities=43% Similarity=0.795 Sum_probs=68.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---cchhHHHHHHHHHHHHHHhcCChhhhhhhcccccccc
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPS---HKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGL 75 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~---~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 75 (315)
..|+||||||+.+++..+||++||+|+.|+||||-+. +.+.+.++.+++|++||+.|+|+..|..|-.||....
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence 3699999999999999999999999999999999875 5578899999999999999999999999999997543
No 60
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.31 E-value=1.4e-12 Score=118.62 Aligned_cols=58 Identities=29% Similarity=0.534 Sum_probs=51.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----cchhHHHHHHHHHHHHHHhcCC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPS-----HKRTEAEAKFKQISEAYDVLSD 60 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~-----~~~~~~~~~f~~i~~Ay~~L~d 60 (315)
.++|+||||++++|.+|||+|||+|+++||||++.. +..+.++++|++|++||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999642 1235689999999999999975
No 61
>PHA02624 large T antigen; Provisional
Probab=99.25 E-value=5.1e-12 Score=124.52 Aligned_cols=59 Identities=29% Similarity=0.398 Sum_probs=55.2
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhh
Q 038604 3 FDYYNILKVNRNA--NEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIY 67 (315)
Q Consensus 3 ~~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y 67 (315)
.++|++|||+++| +.++||+|||++|++||||++.+ .++|++|++||++|+|+.+|..|
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd------eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD------EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc------HHHHHHHHHHHHHHhcHHHhhhc
Confidence 4789999999999 99999999999999999999754 57999999999999999999988
No 62
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.14 E-value=8.2e-11 Score=112.18 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=76.0
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~ 245 (315)
+++.||++.++|||.||+.|+++.|... +| ++++|.||+|+.+|++|+|+|+|++.. +..+|||||+
T Consensus 273 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~ 340 (369)
T PRK14282 273 RSGSDLIYDVTIDYLQAILGTTVEVPLP------EG------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVN 340 (369)
T ss_pred EecCCEEEEEEeCHHHHhCCCEEEEeCC------CC------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 5678999999999999999999988764 67 478999999999999999999999853 3467999999
Q ss_pred EEecCCCCeeecCCCeEEE
Q 038604 246 VDEKPHALYRRDGNDLVVG 264 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~~~ 264 (315)
|.|..|+.|++++.+|+.+
T Consensus 341 ~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 341 VHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 9999999999999887654
No 63
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.14 E-value=3.9e-11 Score=89.68 Aligned_cols=73 Identities=23% Similarity=0.345 Sum_probs=57.9
Q ss_pred ceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CC-CCCcEEEEEEe
Q 038604 171 AVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GI-IAADLIFIVDE 248 (315)
Q Consensus 171 di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~-~~GDL~v~i~v 248 (315)
|++++++|+|.||+.|+++.|... +| ++++|.||+|+++|++++|+|+|.+.. +. ..|||+|+++|
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V 68 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV 68 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence 688999999999999999988765 67 589999999999999999999999743 33 68999999999
Q ss_pred cCCCCee
Q 038604 249 KPHALYR 255 (315)
Q Consensus 249 ~~h~~f~ 255 (315)
.-+..++
T Consensus 69 ~~P~~ls 75 (81)
T PF01556_consen 69 EFPKKLS 75 (81)
T ss_dssp E--SSTS
T ss_pred ECCCCCC
Confidence 9776554
No 64
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.12 E-value=1.3e-10 Score=98.90 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=58.9
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCcc---hhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 2 GFDYYNILKVNRN--ANEDDLKKAYKRLAMIWHPDKNPSHK---RTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 2 ~~~~y~iLgv~~~--as~~eIk~ayr~la~~~hPd~~~~~~---~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
++|||++||+++. .+...+++.|++|.+++|||+..... +..+.+....||+||.+|+||.+|+.|=.
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 4799999999986 79999999999999999999975422 33466778999999999999999999943
No 65
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.03 E-value=4.7e-10 Score=106.87 Aligned_cols=86 Identities=9% Similarity=0.092 Sum_probs=75.5
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~ 245 (315)
+.+.||++.++|||.+|+.|+.+.|... +| +++|.||+|+++|++|+|+|+|++.++ ..+|||||+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~I~~~------~g-------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~ 333 (365)
T PRK14290 267 RINDDLYVDQKINFPQAALGGEIEIKLF------RE-------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVR 333 (365)
T ss_pred EecCCEEEEEEeCHHHHhCCCEEEEEcC------Cc-------eEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence 4578999999999999999999988764 34 689999999999999999999998644 358999999
Q ss_pred EEecCCCCeeecCCCeEEEE
Q 038604 246 VDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~~~~ 265 (315)
|+|..|+.|++++.+|+.++
T Consensus 334 ~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 334 INVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 99999999999998887653
No 66
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.02 E-value=5.1e-10 Score=93.99 Aligned_cols=56 Identities=30% Similarity=0.440 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCcc---hhHHHHHHHHHHHHHHhcCChhhhhhhccc
Q 038604 15 ANEDDLKKAYKRLAMIWHPDKNPSHK---RTEAEAKFKQISEAYDVLSDPQKRQIYDLY 70 (315)
Q Consensus 15 as~~eIk~ayr~la~~~hPd~~~~~~---~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 70 (315)
.+..+|+++||+|++++|||+..+.. +..+.+.|..||+||++|+||.+|+.|+..
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 46789999999999999999965421 334778999999999999999999999874
No 67
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.01 E-value=5.7e-10 Score=106.33 Aligned_cols=87 Identities=20% Similarity=0.173 Sum_probs=75.2
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v 244 (315)
.+.+.||++.++|||.||+.|.++.|... +| .++|.||+|+.+|++|+|+|+|++.++ ..+|||||
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V 326 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII 326 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999999888865 56 459999999999999999999998644 35799999
Q ss_pred EEEecCCCCeeecCCCeEEEE
Q 038604 245 IVDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL~~~~ 265 (315)
+|+|..|+.|++++.+|+..+
T Consensus 327 ~~~v~~P~~l~~~q~~ll~~~ 347 (366)
T PRK14294 327 EVEVKVPTRLTKKQEELLTEF 347 (366)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999887776543
No 68
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=5.9e-10 Score=106.12 Aligned_cols=85 Identities=16% Similarity=0.228 Sum_probs=74.1
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCC-CCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGI-IAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~-~~GDL~v~ 245 (315)
+.+.||++.++|||.||+.|.++.|... +| ++++|.||+|+.+|++|+|+|+|++.++. ..|||+|+
T Consensus 263 R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~ 330 (365)
T PRK14285 263 RNGKDLYATLPISFTQAALGKEIKIQTI------AS------KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILI 330 (365)
T ss_pred EeccceEEEEecCHHHHhCCCEEEEECC------CC------CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEE
Confidence 4577999999999999999999988875 66 47899999999999999999999986544 46999999
Q ss_pred EEecCCCCeeecCCCeEE
Q 038604 246 VDEKPHALYRRDGNDLVV 263 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~~ 263 (315)
|+|..|+.|++++..|+.
T Consensus 331 ~~v~~P~~l~~~q~~~l~ 348 (365)
T PRK14285 331 IKIKTPKNLNSNAIKLLE 348 (365)
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 999999999988866553
No 69
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=6e-10 Score=102.94 Aligned_cols=84 Identities=15% Similarity=0.054 Sum_probs=73.6
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFI 245 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~ 245 (315)
.+++.||++.++|||.+|+.|+++.|... +| .++|.||+|+.+|++++|+|+|.+..++..|||+|+
T Consensus 197 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~~~v~ip~~~~~g~~~rl~g~G~p~~~~~~GDL~v~ 263 (291)
T PRK14299 197 RLEGDDLYATVDVPAPIAVVGGKVRVMTL------DG-------PVEVTIPPRTQAGRKLRLKGKGWPRGPAGRGDQYAE 263 (291)
T ss_pred EEECCEEEEEEecCHHHHhCCCEEEEECC------CC-------CEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence 45688999999999999999999888765 56 589999999999999999999998544568999999
Q ss_pred EEecCCCCeeecCCCeE
Q 038604 246 VDEKPHALYRRDGNDLV 262 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~ 262 (315)
|+|..|+.++.++.+|+
T Consensus 264 ~~V~~P~~l~~~~~~~l 280 (291)
T PRK14299 264 VRITIPTRPTPEEERLY 280 (291)
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99999998888776654
No 70
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.98 E-value=5.7e-10 Score=94.53 Aligned_cols=65 Identities=28% Similarity=0.664 Sum_probs=58.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhh
Q 038604 2 GFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIY 67 (315)
Q Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y 67 (315)
+.|+|+||.|.++.+.++||+.||+|++..|||+|++ +.+.|...|.-+.+||.+|-|+.-|...
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~D-d~~rAqkAFdivkKA~k~l~n~~~rkr~ 116 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPD-DAERAQKAFDIVKKAYKLLENDKIRKRC 116 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcc-cHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 4689999999999999999999999999999999998 5578889999999999999998754433
No 71
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.95 E-value=1.2e-09 Score=104.25 Aligned_cols=86 Identities=15% Similarity=0.149 Sum_probs=75.2
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~ 245 (315)
+.+.||++.++|||.+|+.|+++.|... +| +++|.||+|+.+|++++|+|+|.+.+ +...|||||+
T Consensus 259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~ 325 (371)
T PRK10767 259 RDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQ 325 (371)
T ss_pred EecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence 4578999999999999999999888654 56 68999999999999999999999854 3457999999
Q ss_pred EEecCCCCeeecCCCeEEEE
Q 038604 246 VDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~~~~ 265 (315)
|+|..|+.+++++.+|+.++
T Consensus 326 ~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 326 VVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 99999999999998877654
No 72
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.95 E-value=1.2e-09 Score=104.45 Aligned_cols=86 Identities=16% Similarity=0.182 Sum_probs=74.7
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~ 245 (315)
+.+.||++.++|||.||+.|+++.|... +| .++|.||+|+.+|++++|+|+|.+..+ ...|||||+
T Consensus 262 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~ 328 (377)
T PRK14298 262 RVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVK 328 (377)
T ss_pred EEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4678999999999999999999888765 56 378999999999999999999998543 457999999
Q ss_pred EEecCCCCeeecCCCeEEEE
Q 038604 246 VDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~~~~ 265 (315)
|+|..|+.+++++.+|+.++
T Consensus 329 ~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 329 VIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 99999999999888776553
No 73
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.94 E-value=1.7e-09 Score=103.93 Aligned_cols=87 Identities=15% Similarity=0.172 Sum_probs=73.3
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCC-CcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSV-GKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLI 243 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~-G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~ 243 (315)
.|.+.||++.++|||.||+.|++++|... + | ..++|.||+|+.+|++|+|+|+|++..+ ..+||||
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d~g------~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~ 341 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTL------LKE------GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLL 341 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeec------CCC------cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEE
Confidence 35688999999999999999999988754 3 3 3789999999999999999999998643 4689999
Q ss_pred EEEEecCCCCeeecCCCeEEE
Q 038604 244 FIVDEKPHALYRRDGNDLVVG 264 (315)
Q Consensus 244 v~i~v~~h~~f~R~g~dL~~~ 264 (315)
|+|+|..++.++.+...|+..
T Consensus 342 V~~~v~~P~~l~~~q~~ll~~ 362 (391)
T PRK14284 342 VRISVETPQNLSEEQKELLRQ 362 (391)
T ss_pred EEEEEECCCCCCHHHHHHHHH
Confidence 999999998887776655433
No 74
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.90 E-value=2.6e-09 Score=101.41 Aligned_cols=82 Identities=17% Similarity=0.215 Sum_probs=70.9
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~ 245 (315)
+++.||++.+.|||.||+.|+++.|... +| .++|.||+|+.+|++++|+|+|++.++ ..+|||||+
T Consensus 264 r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~ 330 (354)
T TIGR02349 264 RDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVT 330 (354)
T ss_pred EecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEE
Confidence 4577999999999999999999888764 56 689999999999999999999998643 368999999
Q ss_pred EEecCCCCeeecCCCe
Q 038604 246 VDEKPHALYRRDGNDL 261 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL 261 (315)
|.|..++.++++..++
T Consensus 331 ~~v~~P~~l~~~~~~~ 346 (354)
T TIGR02349 331 VKVETPKNLSKEQKEL 346 (354)
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999998887766544
No 75
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=2.3e-09 Score=102.26 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=72.9
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v 244 (315)
.+.+.||++.+.|||.||+.|+++.|... +| .++|+||+|+.+|++++|+|+|.+.. +...|||||
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14287 258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHV 324 (371)
T ss_pred EEecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEE
Confidence 35678999999999999999999888764 56 47999999999999999999999854 345799999
Q ss_pred EEEecCCCCeeecCCCeEEE
Q 038604 245 IVDEKPHALYRRDGNDLVVG 264 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL~~~ 264 (315)
+|+|..|+.++++...|+.+
T Consensus 325 ~~~v~~P~~l~~~q~~ll~~ 344 (371)
T PRK14287 325 QVRVVTPKNLTEKEKELMRE 344 (371)
T ss_pred EEEEEcCCCCCHHHHHHHHH
Confidence 99999999888777655443
No 76
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=2.7e-09 Score=102.45 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=68.9
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFI 245 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~ 245 (315)
.+++.||++.++|||.+|+.|.++.|... +| .++|+||+|+++|++|+|+|+|++..+..+|||||+
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~ 355 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVT 355 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence 35678999999999999999998888764 55 489999999999999999999998766668999999
Q ss_pred EEecCCCCeeecCC
Q 038604 246 VDEKPHALYRRDGN 259 (315)
Q Consensus 246 i~v~~h~~f~R~g~ 259 (315)
|+|.-++.+..+..
T Consensus 356 ~~v~~P~~Ls~~q~ 369 (392)
T PRK14279 356 VKVAVPPNLDGAAA 369 (392)
T ss_pred EEEECCCCCCHHHH
Confidence 99998876544443
No 77
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.89 E-value=2.9e-09 Score=101.70 Aligned_cols=84 Identities=15% Similarity=0.240 Sum_probs=71.1
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v 244 (315)
.+++.||++.++|+|.+|+.|+++.|... +| +.++|.||+|+++|++|+|+|+|++.+ +..+|||||
T Consensus 261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V 328 (372)
T PRK14300 261 KVDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLT 328 (372)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 35678999999999999999999888875 55 479999999999999999999999864 356799999
Q ss_pred EEEecCCCCeeecCCCe
Q 038604 245 IVDEKPHALYRRDGNDL 261 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL 261 (315)
+|+|..|..++-+...|
T Consensus 329 ~~~v~~P~~ls~~qk~~ 345 (372)
T PRK14300 329 HIHVEVPKNLSKRQREL 345 (372)
T ss_pred EEEEECCCCCCHHHHHH
Confidence 99999998766554433
No 78
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.89 E-value=3.2e-09 Score=101.38 Aligned_cols=85 Identities=15% Similarity=0.145 Sum_probs=71.8
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v 244 (315)
.+.+.||++.++|||.+|+.|.++.|... +| .++|.||+|+++|++|+|+|+|.+.++ ..+|||||
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I 326 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV 326 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35678999999999999999999888765 56 489999999999999999999998644 45799999
Q ss_pred EEEecCCCCeeecCCCeEE
Q 038604 245 IVDEKPHALYRRDGNDLVV 263 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL~~ 263 (315)
+|+|..|+.++.+..+|+.
T Consensus 327 ~~~V~~P~~l~~~q~~~l~ 345 (373)
T PRK14301 327 EVSVVTPTKLTKRQEELLR 345 (373)
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 9999999877766655443
No 79
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=3.4e-09 Score=101.06 Aligned_cols=84 Identities=15% Similarity=0.171 Sum_probs=71.7
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCC-CCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGI-IAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~-~~GDL~v 244 (315)
.+.+.||++.++|||.||+.|+++.|... +| ..++|.||+|+++|++++|+|+|.+.++. ..|||||
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG------~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v 321 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KG------DELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV 321 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeecC------CC------CEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999999888876 67 36899999999999999999999986554 4699999
Q ss_pred EEEecCCCCeeecCCCe
Q 038604 245 IVDEKPHALYRRDGNDL 261 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL 261 (315)
+|.|..|+.++.+...|
T Consensus 322 ~~~v~~P~~ls~~q~~~ 338 (369)
T PRK14288 322 ELQVIYPKSLNKEQQEL 338 (369)
T ss_pred EEEEECCCCCCHHHHHH
Confidence 99999998776655433
No 80
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=3.7e-09 Score=101.45 Aligned_cols=82 Identities=18% Similarity=0.220 Sum_probs=69.5
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFI 245 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~ 245 (315)
.+.+.||++.++|||.+|+.|++++|... +| +.++|.||+|+++|++|+|+|+|.+..++.+|||||+
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~ 349 (389)
T PRK14295 282 GRSGDNLTVTVPVTFPEAALGAEVRVPTL------GG------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVT 349 (389)
T ss_pred EEecCCEEEEEeecHHHHhCCCeEEEECC------CC------CEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEE
Confidence 35678999999999999999999888654 56 4799999999999999999999998655668999999
Q ss_pred EEecCCCCeeecCC
Q 038604 246 VDEKPHALYRRDGN 259 (315)
Q Consensus 246 i~v~~h~~f~R~g~ 259 (315)
|.|.-+....-...
T Consensus 350 ~~v~~P~~Ls~~qk 363 (389)
T PRK14295 350 VEVAVPKDLSGKAR 363 (389)
T ss_pred EEEECCCCCCHHHH
Confidence 99998876554433
No 81
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=4e-09 Score=100.82 Aligned_cols=86 Identities=16% Similarity=0.170 Sum_probs=73.9
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCC--CCCcEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGI--IAADLIF 244 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~--~~GDL~v 244 (315)
+.+.|+.+.++|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|.+.++. ..|||||
T Consensus 264 r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v 330 (374)
T PRK14293 264 RDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLI 330 (374)
T ss_pred hhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEE
Confidence 4567899999999999999999888875 56 3689999999999999999999986443 4799999
Q ss_pred EEEecCCCCeeecCCCeEEEE
Q 038604 245 IVDEKPHALYRRDGNDLVVGQ 265 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL~~~~ 265 (315)
+|.|..|+.+++++.+|+..+
T Consensus 331 ~~~v~~P~~l~~~~~~l~~~l 351 (374)
T PRK14293 331 TVKVKIPTRISDEERELLEKL 351 (374)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999888776543
No 82
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=6.8e-09 Score=99.09 Aligned_cols=85 Identities=18% Similarity=0.154 Sum_probs=71.1
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v 244 (315)
.+.+.||++.+.|+|.||+.|+++.|... +| +.++|.||+|+++|++++|+|+|.+..+ ...|||||
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V 333 (372)
T PRK14286 266 ERQGNDLILVRKISLAQAILGAEIEVPTI------DG------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHV 333 (372)
T ss_pred EEecCCEEEEEEECHHHHhCCCEEEEeCC------CC------CEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEE
Confidence 35678999999999999999999888765 67 4789999999999999999999998543 45799999
Q ss_pred EEEecCCCCeeecCCCeE
Q 038604 245 IVDEKPHALYRRDGNDLV 262 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL~ 262 (315)
+|+|.-++.++.+..+|+
T Consensus 334 ~~~V~~P~~Ls~~qk~~l 351 (372)
T PRK14286 334 IVKIEIPKKITRRQRELI 351 (372)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998886665554443
No 83
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.82 E-value=1.6e-08 Score=94.24 Aligned_cols=79 Identities=18% Similarity=0.134 Sum_probs=68.1
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCCCCCCcEEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPGIIAADLIFI 245 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g~~~GDL~v~ 245 (315)
.+.+.||++.++|||.+|+.|+++.|... +| .++|+||+|+.+|++++|+|+|.+.++ ..|||+|+
T Consensus 205 ~r~g~DL~~~~~Isl~~al~G~~~~i~~~------~g-------~v~v~ip~g~~~g~~~ri~g~G~p~~~-~~GdL~v~ 270 (306)
T PRK10266 205 DIVGQDLEIVVPLAPWEAALGAKVTVPTL------KE-------SILLTIPPGSQAGQRLRVKGKGLVSKK-QTGDLYAV 270 (306)
T ss_pred EEeCCceEEEEecCHHHHhCCCEEEeeCC------Cc-------cEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCEEEE
Confidence 35688999999999999999999988764 45 589999999999999999999998654 57999999
Q ss_pred EEecCCCCeeecC
Q 038604 246 VDEKPHALYRRDG 258 (315)
Q Consensus 246 i~v~~h~~f~R~g 258 (315)
|+|..|+.+.-+.
T Consensus 271 ~~v~~P~~l~~~q 283 (306)
T PRK10266 271 LKIVMPPKPDEKT 283 (306)
T ss_pred EEEECCCCCCHHH
Confidence 9999998765433
No 84
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=1.8e-08 Score=96.59 Aligned_cols=74 Identities=23% Similarity=0.256 Sum_probs=65.5
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~ 245 (315)
+.+.||++.++|||+||+.|+++.|... +| +.++|.||+|+++|++|+|+|+|++.++ ..+|||||+
T Consensus 272 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V~ 339 (382)
T PRK14291 272 RRGDNLYLDVNITVAEAVLGTELEVPLL------DG------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVR 339 (382)
T ss_pred eecCCeEEEEEeeHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4578999999999999999999998875 67 4789999999999999999999998643 457999999
Q ss_pred EEecCCC
Q 038604 246 VDEKPHA 252 (315)
Q Consensus 246 i~v~~h~ 252 (315)
|+|.-+.
T Consensus 340 ~~V~~P~ 346 (382)
T PRK14291 340 VHIDVPK 346 (382)
T ss_pred EEEEeCC
Confidence 9999775
No 85
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=7.2e-09 Score=91.76 Aligned_cols=68 Identities=31% Similarity=0.453 Sum_probs=57.5
Q ss_pred CCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhccc
Q 038604 3 FDYYNILKVNR---NANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLY 70 (315)
Q Consensus 3 ~~~y~iLgv~~---~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 70 (315)
.|+|.+||++. -|++.+|.+|+++.+.+||||+....-.....+-|+.|+.||++|+|+.+|.+||..
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~ 113 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSN 113 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccc
Confidence 58999999987 478999999999999999999972101134567899999999999999999999974
No 86
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.79 E-value=9.6e-09 Score=98.38 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=68.1
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~ 245 (315)
+.+.||++.++|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V~ 333 (380)
T PRK14276 267 RDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVT 333 (380)
T ss_pred eecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence 5578999999999999999999988865 56 479999999999999999999998643 457999999
Q ss_pred EEecCCCCeeecCC
Q 038604 246 VDEKPHALYRRDGN 259 (315)
Q Consensus 246 i~v~~h~~f~R~g~ 259 (315)
|+|.-++.+..+..
T Consensus 334 ~~v~~P~~l~~~q~ 347 (380)
T PRK14276 334 VNIVTPTKLNDAQK 347 (380)
T ss_pred EEEECCCCCCHHHH
Confidence 99998876554443
No 87
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.78 E-value=1.3e-08 Score=97.46 Aligned_cols=81 Identities=15% Similarity=0.190 Sum_probs=68.0
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v 244 (315)
.+.+.||++.+.|||.||+.|+++.|... +| .++|.||+|+.+|++++|+|+|.+.. +...|||||
T Consensus 263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v 329 (376)
T PRK14280 263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYV 329 (376)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999998888765 56 47999999999999999999999853 345799999
Q ss_pred EEEecCCCCeeecCC
Q 038604 245 IVDEKPHALYRRDGN 259 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~ 259 (315)
+|+|..++.++.+..
T Consensus 330 ~~~v~~P~~Ls~~q~ 344 (376)
T PRK14280 330 VVRVVTPTKLTDRQK 344 (376)
T ss_pred EEEEECCCCCCHHHH
Confidence 999998876554443
No 88
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.77 E-value=1.3e-08 Score=98.02 Aligned_cols=81 Identities=19% Similarity=0.168 Sum_probs=68.0
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v 244 (315)
.+.+.||++.++|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|.+.+ +...|||||
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V 348 (397)
T PRK14281 282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYV 348 (397)
T ss_pred EEecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35678999999999999999999888865 56 47999999999999999999999853 345799999
Q ss_pred EEEecCCCCeeecCC
Q 038604 245 IVDEKPHALYRRDGN 259 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~ 259 (315)
+|+|.-+..++.+..
T Consensus 349 ~~~V~~P~~Ls~~qk 363 (397)
T PRK14281 349 RVNVFVPKEVSHQDK 363 (397)
T ss_pred EEEEEcCCCCCHHHH
Confidence 999998876554443
No 89
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.75 E-value=1.6e-08 Score=96.92 Aligned_cols=79 Identities=15% Similarity=0.060 Sum_probs=67.2
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~ 245 (315)
+.+.||++.++|||.||+.|+++.|... +| .++|.||+|+.+|++++|+|+|.+.. +...|||||+
T Consensus 269 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 335 (380)
T PRK14297 269 RKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVT 335 (380)
T ss_pred EeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEE
Confidence 4678999999999999999999888865 56 47999999999999999999999853 3457999999
Q ss_pred EEecCCCCeeecC
Q 038604 246 VDEKPHALYRRDG 258 (315)
Q Consensus 246 i~v~~h~~f~R~g 258 (315)
|.|.-+..++.+.
T Consensus 336 ~~v~~P~~ls~~q 348 (380)
T PRK14297 336 VIVDIPKKLNSKQ 348 (380)
T ss_pred EEEEcCCCCCHHH
Confidence 9999887555444
No 90
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.75 E-value=1.4e-08 Score=95.38 Aligned_cols=84 Identities=17% Similarity=0.185 Sum_probs=71.7
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCC-CCCCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQE-PGIIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~g~~~GDL~v~ 245 (315)
|.+.||+..++|++.+|..|.+.++... +| .++|+||+|+..|++++|+|+|.+. .+...|||||+
T Consensus 261 R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~ 327 (371)
T COG0484 261 RDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVR 327 (371)
T ss_pred ECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEE
Confidence 4567999999999999999998888876 67 3999999999999999999999994 55667999999
Q ss_pred EEecCCCCeeecCCCeEE
Q 038604 246 VDEKPHALYRRDGNDLVV 263 (315)
Q Consensus 246 i~v~~h~~f~R~g~dL~~ 263 (315)
|+|.-++.+......|+-
T Consensus 328 v~v~~P~~ls~~q~~lL~ 345 (371)
T COG0484 328 VKVETPKNLSDEQKELLE 345 (371)
T ss_pred EEEEcCCCCCHHHHHHHH
Confidence 999999887665555443
No 91
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=2.2e-08 Score=95.88 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=68.8
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v 244 (315)
.+.+.||++.++|+|.+|+.|+++.|... ++ ..++|.||+|+++|++++|+|+|.+.. +...|||||
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d~------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V 326 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI------LD------GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHA 326 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEecC------CC------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999998888754 33 378999999999999999999999853 345799999
Q ss_pred EEEecCCCCeeecCCCe
Q 038604 245 IVDEKPHALYRRDGNDL 261 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL 261 (315)
+|+|.-+..++.+...|
T Consensus 327 ~~~V~~P~~Ls~~qk~~ 343 (378)
T PRK14278 327 HVEVVVPTRLDHEDIEL 343 (378)
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 99999887555444333
No 92
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=1.5e-08 Score=96.82 Aligned_cols=84 Identities=14% Similarity=0.150 Sum_probs=70.5
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEE
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIF 244 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v 244 (315)
.+.+.||+..++|+|.||+.|+++.|... +| .++|.||+|+.+|++++|+|+|++.+ +..+|||||
T Consensus 258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14292 258 RREQEHLIYEARIGFAKAALGGQITVPTL------DG-------PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV 324 (371)
T ss_pred ccchhceeEEeccCHHHHhCCCeEEEECC------CC-------CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 34577999999999999999999888855 56 23699999999999999999999854 445799999
Q ss_pred EEEecCCCCeeecCCCeE
Q 038604 245 IVDEKPHALYRRDGNDLV 262 (315)
Q Consensus 245 ~i~v~~h~~f~R~g~dL~ 262 (315)
+|.|..|+.++.+...|+
T Consensus 325 ~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14292 325 EYEIAVPKQLSPEAREAL 342 (371)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999987776665544
No 93
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.69 E-value=3.1e-08 Score=95.08 Aligned_cols=81 Identities=17% Similarity=0.150 Sum_probs=67.3
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCCC-CCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEPG-IIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~g-~~~GDL~v~ 245 (315)
+.+.||++.++|||.||+.|+++.|... +| .++|.||+|+.+|++++|+|+|.+..+ ...|||||+
T Consensus 276 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 342 (386)
T PRK14277 276 REGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVK 342 (386)
T ss_pred EecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4577999999999999999999888765 67 379999999999999999999998533 357999999
Q ss_pred EEecCCCCeeecCCC
Q 038604 246 VDEKPHALYRRDGND 260 (315)
Q Consensus 246 i~v~~h~~f~R~g~d 260 (315)
|+|.-++..+.+..+
T Consensus 343 ~~V~~P~~Ls~~qk~ 357 (386)
T PRK14277 343 VYIEVPKKLTEKQKE 357 (386)
T ss_pred EEEEeCCCCCHHHHH
Confidence 999977655444433
No 94
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.67 E-value=3.5e-08 Score=94.21 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=66.2
Q ss_pred CCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC--CCCCCcEEEEE
Q 038604 169 APAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP--GIIAADLIFIV 246 (315)
Q Consensus 169 ~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~--g~~~GDL~v~i 246 (315)
+.||++.++|||.||+.|+++.|... +| .++|.||+++++|++++|+|+|.+.. ....|||||+|
T Consensus 273 G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~ 339 (372)
T PRK14296 273 NNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKV 339 (372)
T ss_pred CCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEE
Confidence 68999999999999999999888865 67 37999999999999999999999732 33579999999
Q ss_pred EecCCCCeeecCC
Q 038604 247 DEKPHALYRRDGN 259 (315)
Q Consensus 247 ~v~~h~~f~R~g~ 259 (315)
+|.-++....+..
T Consensus 340 ~V~~P~~Ls~~q~ 352 (372)
T PRK14296 340 NIVVPKNLSKKEK 352 (372)
T ss_pred EEECCCCCCHHHH
Confidence 9998876554443
No 95
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.67 E-value=4.1e-08 Score=93.99 Aligned_cols=80 Identities=14% Similarity=0.090 Sum_probs=66.7
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~ 245 (315)
+.+.||++.++|+|.+|+.|.++.|... +| +++|.||+|+++|++|+|+|+|.+.. +...|||||+
T Consensus 267 r~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~ 333 (378)
T PRK14283 267 REGANLYYEKPISFVQAALGDTVDVPTI------DG-------PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVK 333 (378)
T ss_pred EecCCEEEEEecCHHHHhcCCeEEEEcC------Cc-------eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 4577999999999999999999888754 55 58999999999999999999999853 3457999999
Q ss_pred EEecCCCCeeecCC
Q 038604 246 VDEKPHALYRRDGN 259 (315)
Q Consensus 246 i~v~~h~~f~R~g~ 259 (315)
|+|.-++..+.+..
T Consensus 334 ~~v~~P~~l~~~q~ 347 (378)
T PRK14283 334 VKVVVPKKLSPKQK 347 (378)
T ss_pred EEEEeCCCCCHHHH
Confidence 99997765544443
No 96
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.64 E-value=4.4e-08 Score=94.70 Aligned_cols=81 Identities=16% Similarity=0.083 Sum_probs=67.8
Q ss_pred cccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCC--CCCCCEEEecCCCCCCCC--CCCCc
Q 038604 166 FKKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPG--WKKGTKITFPEKGNQEPG--IIAAD 241 (315)
Q Consensus 166 ~~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~g--~~~GD 241 (315)
.|.+.||++.++|||.||+.|.++.|... +| +.++|+||+| +++|++++|+|+|.+... ...||
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG------~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD 337 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHL------DG------RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN 337 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CC------CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence 35688999999999999999998888765 67 3689999999 999999999999998533 35799
Q ss_pred EEEEEEecCC--CCeeecC
Q 038604 242 LIFIVDEKPH--ALYRRDG 258 (315)
Q Consensus 242 L~v~i~v~~h--~~f~R~g 258 (315)
|||+|.|.-+ ..++.+.
T Consensus 338 L~V~~~V~~P~~~~Ls~~q 356 (421)
T PTZ00037 338 LYVTFEVIFPVDRKFTNEE 356 (421)
T ss_pred EEEEEEEEcCCCCCCCHHH
Confidence 9999999987 5544433
No 97
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.62 E-value=5.6e-08 Score=93.36 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=66.0
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEecCCCCCCC-CCCCCcEEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFPEKGNQEP-GIIAADLIFI 245 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-g~~~GDL~v~ 245 (315)
+.+.||++.+.|+|.+|+.|+.+.|... +| .++|.||+|+++|++++|+|+|.+.+ +..+|||||+
T Consensus 275 r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 341 (386)
T PRK14289 275 RDENDLIYNLLLSVPTAALGGAVEVPTI------DG-------KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVN 341 (386)
T ss_pred ccccceeEEeccCHHHHhCCCeEEeecC------Cc-------eEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEEE
Confidence 4567999999999999999999888875 56 47999999999999999999999854 3468999999
Q ss_pred EEecCCCCeeec
Q 038604 246 VDEKPHALYRRD 257 (315)
Q Consensus 246 i~v~~h~~f~R~ 257 (315)
|+|.-+...+.+
T Consensus 342 ~~v~~P~~l~~~ 353 (386)
T PRK14289 342 VSVYIPETLSKE 353 (386)
T ss_pred EEEEeCCCCCHH
Confidence 999977644433
No 98
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.52 E-value=2.8e-07 Score=92.68 Aligned_cols=70 Identities=47% Similarity=0.910 Sum_probs=65.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcccccccc
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDLYGEEGL 75 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 75 (315)
.|||+||||+++|+.++||+|||+||++||||+++. +.+.++|++|++||++|+|+.+|+.||.||..+.
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~---~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG~ 71 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA---PDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCCHHHHHHHhhhccccc
Confidence 699999999999999999999999999999999976 6788899999999999999999999999887543
No 99
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.44 E-value=1.4e-07 Score=81.86 Aligned_cols=55 Identities=35% Similarity=0.634 Sum_probs=49.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHH-hcCC
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYD-VLSD 60 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~-~L~d 60 (315)
+.||.||||...|+.++++.||..||+++|||...+ ....++|.+|.+||. ||+.
T Consensus 47 ~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~---~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 47 MECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE---EADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc---cccHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999976 556789999999998 7764
No 100
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.31 E-value=1.1e-06 Score=67.40 Aligned_cols=49 Identities=33% Similarity=0.455 Sum_probs=43.5
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCCh
Q 038604 7 NILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDP 61 (315)
Q Consensus 7 ~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~ 61 (315)
-||||++.++.+.||.|+||++...|||+..+ ...-.+||||+++|...
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGS------PYlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGS------PYLASKINEAKDLLEGT 108 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCC------HHHHHHHHHHHHHHhcc
Confidence 48999999999999999999999999999987 34556799999999753
No 101
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.23 E-value=1.2e-06 Score=89.90 Aligned_cols=51 Identities=33% Similarity=0.638 Sum_probs=43.9
Q ss_pred CcccccCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcC
Q 038604 4 DYYNILKVNRNA----NEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLS 59 (315)
Q Consensus 4 ~~y~iLgv~~~a----s~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~ 59 (315)
+-|+||.|+-+- ..+.||++|+|||.+|||||||+ -.++|..+|+|||.|+
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-----GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-----GREMFERVNKAYELLS 1336 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHH
Confidence 458999987542 34889999999999999999964 6789999999999998
No 102
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.00048 Score=64.24 Aligned_cols=74 Identities=20% Similarity=0.191 Sum_probs=63.9
Q ss_pred ccCCceEEEEeeehhhHhcCceeEEEEeeeEEcCCCcEEeEEEEEEEEeCCC--CCCCCEEEecCCCCCCCCCCCCcEEE
Q 038604 167 KKAPAVENLLPCSLEEIYKGAKKKMRISRNVYDSVGKTRTVEEILTVEIKPG--WKKGTKITFPEKGNQEPGIIAADLIF 244 (315)
Q Consensus 167 ~~~~di~~~l~vsl~e~~~G~~k~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~g~~~GDL~v 244 (315)
+++.++...+.++|.|+..|..+.+... +| ..+++.++|| +.+|++++++|+|++......|||||
T Consensus 249 Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dG------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi 316 (337)
T KOG0712|consen 249 RRGSDLYRKLTISLVEALCGFQRVWETL------DG------RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYI 316 (337)
T ss_pred ecccccceeeecchhhccccceEEEEcc------CC------ceEEEecCCCceeChhHEEeecCCCcccccCCCCcEEE
Confidence 4577888999999999999988877733 67 5899999999 99999999999999965555999999
Q ss_pred EEEecCCC
Q 038604 245 IVDEKPHA 252 (315)
Q Consensus 245 ~i~v~~h~ 252 (315)
.+.|+-++
T Consensus 317 ~~~v~fp~ 324 (337)
T KOG0712|consen 317 KFEVKFPK 324 (337)
T ss_pred EEEEEcCC
Confidence 99999776
No 103
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.80 E-value=0.0013 Score=54.16 Aligned_cols=66 Identities=26% Similarity=0.491 Sum_probs=52.2
Q ss_pred CCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCC--c-chhHHHHHHHHHHHHHHhcCChhhhhhhc
Q 038604 3 FDYYNILKVNR--NANEDDLKKAYKRLAMIWHPDKNPS--H-KRTEAEAKFKQISEAYDVLSDPQKRQIYD 68 (315)
Q Consensus 3 ~~~y~iLgv~~--~as~~eIk~ayr~la~~~hPd~~~~--~-~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD 68 (315)
++||.++|... ...++.++..|.-..++.|||+... . ....|.+...++|+||.+|.||-+|+.|=
T Consensus 8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yi 78 (168)
T KOG3192|consen 8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYL 78 (168)
T ss_pred HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 57999997654 4567777779999999999999421 1 12356778999999999999999999994
No 104
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.41 E-value=0.0018 Score=55.32 Aligned_cols=56 Identities=34% Similarity=0.519 Sum_probs=47.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----cchhHHHHHHHHHHHHHHhc
Q 038604 3 FDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPS-----HKRTEAEAKFKQISEAYDVL 58 (315)
Q Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~-----~~~~~~~~~f~~i~~Ay~~L 58 (315)
.+.|.+|++...+...+|+++|+++...+|||+-.. +--..+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999998632 11345788899999999854
No 105
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.84 E-value=0.0061 Score=52.08 Aligned_cols=66 Identities=29% Similarity=0.455 Sum_probs=50.4
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCcc---hhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 4 DYYNILKVNRNA--NEDDLKKAYKRLAMIWHPDKNPSHK---RTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 4 ~~y~iLgv~~~a--s~~eIk~ayr~la~~~hPd~~~~~~---~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
|++..++..+.+ ..+.++..|+.+++.+|||+...+. ...+.+.+..+|.||.+|.+|-+|+.|=.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 445555555544 3556889999999999999986433 22355789999999999999999999844
No 106
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=95.24 E-value=0.033 Score=44.92 Aligned_cols=51 Identities=24% Similarity=0.272 Sum_probs=37.5
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChh
Q 038604 6 YNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQ 62 (315)
Q Consensus 6 y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~ 62 (315)
..||+|++.++.++|.+.|.+|....+|++..+ ...=.+|..|.|.|..+-
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS------fYLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS------FYLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-------HHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC------HHHHHHHHHHHHHHHHHH
Confidence 369999999999999999999999999998876 444467888998886543
No 107
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=94.64 E-value=0.044 Score=53.75 Aligned_cols=42 Identities=33% Similarity=0.539 Sum_probs=30.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCc-c----hhHHHHHHHHHHHHHH
Q 038604 15 ANEDDLKKAYKRLAMIWHPDKNPSH-K----RTEAEAKFKQISEAYD 56 (315)
Q Consensus 15 as~~eIk~ayr~la~~~hPd~~~~~-~----~~~~~~~f~~i~~Ay~ 56 (315)
.+.++|||+|||..+..||||-+.. . +--+++.|..+++||.
T Consensus 400 Vtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn 446 (453)
T KOG0431|consen 400 VTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWN 446 (453)
T ss_pred cCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 5889999999999999999998652 1 2234555555555654
No 108
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=86.83 E-value=0.65 Score=40.04 Aligned_cols=44 Identities=14% Similarity=0.064 Sum_probs=36.6
Q ss_pred HhcCceeEEE--EeeeEEcCCCcEEeEEEEEEEEeCCCCCCCCEEEec
Q 038604 183 IYKGAKKKMR--ISRNVYDSVGKTRTVEEILTVEIKPGWKKGTKITFP 228 (315)
Q Consensus 183 ~~~G~~k~i~--~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~~~ 228 (315)
-|.|..+.++ -.|..|+|+| .+..++.+.+.+ .|+.+|++|++.
T Consensus 104 ~C~G~G~~i~~~~~C~~C~G~G-~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 104 RCRGTGLIQRRQRECDTCAGTG-RFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCCCeeEEecCCCCCCCCCCcc-EEeeeEEEEEEe-eeccCCceeeHH
Confidence 5778878776 4688888999 678888889999 999999999874
No 109
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=83.57 E-value=1.3 Score=38.42 Aligned_cols=40 Identities=25% Similarity=0.355 Sum_probs=30.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCCh
Q 038604 12 NRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDP 61 (315)
Q Consensus 12 ~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~ 61 (315)
+++||.+||.+|+.++..+|--| ++.-.+|..||+.+.-.
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd----------~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD----------EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC----------HHHHHHHHHHHHHHHHH
Confidence 57999999999999999998221 33455799999876544
No 110
>PF13446 RPT: A repeated domain in UCH-protein
Probab=83.23 E-value=2.8 Score=29.07 Aligned_cols=25 Identities=20% Similarity=0.433 Sum_probs=22.7
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHH
Q 038604 5 YYNILKVNRNANEDDLKKAYKRLAM 29 (315)
Q Consensus 5 ~y~iLgv~~~as~~eIk~ayr~la~ 29 (315)
=|++|||+++++.+.|-.+|+....
T Consensus 7 Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 7 AYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 4899999999999999999988765
No 111
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=82.14 E-value=1.4 Score=41.50 Aligned_cols=56 Identities=34% Similarity=0.506 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC--cchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 14 NANEDDLKKAYKRLAMIWHPDKNPS--HKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 14 ~as~~eIk~ayr~la~~~hPd~~~~--~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
-++..+|+.+|+..++..||++-.. .......+.|++|.+||++|++..+|...|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 3678899999999999999998741 0112567789999999999998665555544
No 112
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=76.76 E-value=10 Score=27.41 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=31.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPS 38 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~ 38 (315)
|=+|--+++++++-|+..||+.|-++..+|..=-..|+
T Consensus 1 MCRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS 38 (88)
T COG5552 1 MCRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPS 38 (88)
T ss_pred CccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcc
Confidence 56777889999999999999999988888876666655
No 113
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=72.19 E-value=18 Score=26.35 Aligned_cols=59 Identities=15% Similarity=0.131 Sum_probs=39.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcchhHHHH-HHHHHHHHHHhcC
Q 038604 1 MGFDYYNILKVNRNANEDDLKKAYKRLAMIWHPDKNPSHKRTEAEA-KFKQISEAYDVLS 59 (315)
Q Consensus 1 m~~~~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~~~~~~~~~-~f~~i~~Ay~~L~ 59 (315)
|=+|--.+.++.+-|+.+||..|=.++++|..=-..|+..+.++.+ ...+|..|-.-|.
T Consensus 1 MCRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~~AV~eva~at~~LL 60 (78)
T PF10041_consen 1 MCRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFDRAVAEVAAATRRLL 60 (78)
T ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 4556667789999999999999999999988766666522233322 2344555544443
No 114
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=64.71 E-value=13 Score=29.39 Aligned_cols=48 Identities=27% Similarity=0.405 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCc--chhHHHHHHHHHHHHHHhcCC
Q 038604 13 RNANEDDLKKAYKRLAMIWHPDKNPSH--KRTEAEAKFKQISEAYDVLSD 60 (315)
Q Consensus 13 ~~as~~eIk~ayr~la~~~hPd~~~~~--~~~~~~~~f~~i~~Ay~~L~d 60 (315)
+..+..+++.|.|.+-++.|||..... .+..-++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 455778899999999999999965321 223344556666666666553
No 115
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=60.22 E-value=5.8 Score=19.09 Aligned_cols=13 Identities=46% Similarity=0.887 Sum_probs=10.4
Q ss_pred HHHHHHHHHHhcC
Q 038604 47 KFKQISEAYDVLS 59 (315)
Q Consensus 47 ~f~~i~~Ay~~L~ 59 (315)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4778889998874
No 116
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=47.80 E-value=26 Score=28.01 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=28.8
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 038604 7 NILKVNRNANEDDLKKAYKRLAMIWHPDKNPS 38 (315)
Q Consensus 7 ~iLgv~~~as~~eIk~ayr~la~~~hPd~~~~ 38 (315)
.||+|+...+.++|.+.|..|-....+.+..+
T Consensus 63 qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 63 QILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred hHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 58999999999999999999999988877754
No 117
>PRK14051 negative regulator GrlR; Provisional
Probab=41.66 E-value=1e+02 Score=24.03 Aligned_cols=70 Identities=19% Similarity=0.158 Sum_probs=42.3
Q ss_pred CcEEEEEEecCCCCeeecCCCeEEEEeeCHHHHHcCCeEEEe-cC-CCcEEEEecCCCcCCCcEEEEcCCCcCC
Q 038604 240 ADLIFIVDEKPHALYRRDGNDLVVGQEITLLEALTGKTLDLT-TL-DGRNLMIPLTDIVKPGTEIVVPNEGMPI 311 (315)
Q Consensus 240 GDL~v~i~v~~h~~f~R~g~dL~~~~~Isl~eal~G~~~~i~-tl-dG~~~~i~i~~~~~~g~~~~i~g~G~P~ 311 (315)
-||+++++-..|..-+.-+-+--+.+.|+-+-.-.++.+.+. +. +..++.|.+. .+-=..++|++-|||.
T Consensus 48 ~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Nekl~vdv~--akFI~~LvI~~~~~~~ 119 (123)
T PRK14051 48 EDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVY--AKFIEPLVIKNTGMPQ 119 (123)
T ss_pred ceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCcEEEEEEe--eeeeeeeEEccCCCcc
Confidence 577888877777766655555556666663333345555553 33 4445555543 2333458999999994
No 118
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=36.97 E-value=41 Score=19.39 Aligned_cols=18 Identities=22% Similarity=0.510 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 038604 16 NEDDLKKAYKRLAMIWHP 33 (315)
Q Consensus 16 s~~eIk~ayr~la~~~hP 33 (315)
..++.+.+-|+.|+.||-
T Consensus 9 ~~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYHE 26 (28)
T ss_pred chHHHHHHHHHHHHHhcc
Confidence 347788899999999994
No 119
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold. It is found at the N terminus of many but not all myosins. The function of this domain is unknown.; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 2EC6_A 2W4H_M 1O1E_P 1O1D_D 1O18_A 1O1C_P 1O1B_D 1O1F_A 2W4A_M 2W4G_M ....
Probab=34.37 E-value=65 Score=20.37 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=26.4
Q ss_pred eeecCCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEe
Q 038604 254 YRRDGNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIP 291 (315)
Q Consensus 254 f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~ 291 (315)
|-.+..+-|....|. ...|..+.|.+.+|+++.|+
T Consensus 5 WvpD~~egfv~g~I~---~~~g~~vtV~~~~G~~~tv~ 39 (42)
T PF02736_consen 5 WVPDPKEGFVKGEII---EEEGDKVTVKTEDGKEVTVK 39 (42)
T ss_dssp EEEESSSSEEEEEEE---EEESSEEEEEETTTEEEEEE
T ss_pred EEeCCcccEEEEEEE---EEcCCEEEEEECCCCEEEeC
Confidence 445566677777774 67899999999999877765
No 120
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=33.35 E-value=26 Score=31.75 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=24.9
Q ss_pred EEeeCHHHHHcC-CeEEEecCCCcEEEEecC
Q 038604 264 GQEITLLEALTG-KTLDLTTLDGRNLMIPLT 293 (315)
Q Consensus 264 ~~~Isl~eal~G-~~~~i~tldG~~~~i~i~ 293 (315)
+.+|-|+||+.| |..+|++.|+..-.|.|.
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiT 49 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEIT 49 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEc
Confidence 568899999999 699999999986566663
No 121
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=32.07 E-value=1.1e+02 Score=20.35 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=29.5
Q ss_pred cCCeEEEecCCCcEEEEecCCCcCCCcEEEEcCCCc
Q 038604 274 TGKTLDLTTLDGRNLMIPLTDIVKPGTEIVVPNEGM 309 (315)
Q Consensus 274 ~G~~~~i~tldG~~~~i~i~~~~~~g~~~~i~g~G~ 309 (315)
.+-...|-|.||.-++|+.++..+-|+++.+.-.-.
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~ 39 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDI 39 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhh
Confidence 355778999999999999988899999998876543
No 122
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=30.26 E-value=1.2e+02 Score=20.19 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 21 KKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
.+.+++-.+..||+.+ ..+..+.+.+.|..|++.++...++.
T Consensus 12 ~~~~~~~~~~~~~~~~-------~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS-------VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC-------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3455666777788744 34677889999999998766665554
No 123
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=29.79 E-value=76 Score=22.32 Aligned_cols=41 Identities=24% Similarity=0.310 Sum_probs=29.4
Q ss_pred HHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 22 KAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
+..|...+.-||+.. ..+..+.|.+.|..|++.++...+|.
T Consensus 14 ~~~r~~~~~~~p~~~-------~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKE-------NRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 345556667788754 24667889999999998887765554
No 124
>PF09285 Elong-fact-P_C: Elongation factor P, C-terminal; InterPro: IPR015365 These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology []. ; GO: 0043043 peptide biosynthetic process, 0005737 cytoplasm; PDB: 1YBY_A 3OYY_B 1UEB_B 3HUW_V 3HUY_V 3A5Z_H.
Probab=29.04 E-value=49 Score=22.65 Aligned_cols=20 Identities=15% Similarity=0.252 Sum_probs=13.9
Q ss_pred EEEEeCCCCCCCCEEEecCC
Q 038604 211 LTVEIKPGWKKGTKITFPEK 230 (315)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~ 230 (315)
++|.+|+-+..|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~VdT~ 49 (56)
T PF09285_consen 30 AEIQVPLFIEEGDKIKVDTR 49 (56)
T ss_dssp -EEEEETT--TT-EEEEETT
T ss_pred CEEEccceecCCCEEEEECC
Confidence 57999999999999998653
No 125
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=28.60 E-value=77 Score=25.14 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=27.0
Q ss_pred EEEeCCCCCCCCEEEecCCCCCCCCC-------CCCcEEEEEEecCC
Q 038604 212 TVEIKPGWKKGTKITFPEKGNQEPGI-------IAADLIFIVDEKPH 251 (315)
Q Consensus 212 ~V~Ip~G~~~G~~i~~~g~G~~~~g~-------~~GDL~v~i~v~~h 251 (315)
+..||.|+..|+.|.+.|.=...++. ..+|+.+++++...
T Consensus 2 ~~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~ 48 (128)
T smart00276 2 TLPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFN 48 (128)
T ss_pred cccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCC
Confidence 45789999999999999865442211 12477777776654
No 126
>KOG0527 consensus HMG-box transcription factor [Transcription]
Probab=28.12 E-value=59 Score=30.74 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 22 KAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
+..||...+-.||-+. .++.|.|-+-|..|++.+||-.+|.
T Consensus 75 q~~RRkma~qnP~mHN-------SEISK~LG~~WK~Lse~EKrPFi~E 115 (331)
T KOG0527|consen 75 QGQRRKLAKQNPKMHN-------SEISKRLGAEWKLLSEEEKRPFVDE 115 (331)
T ss_pred HHHHHHHHHhCcchhh-------HHHHHHHHHHHhhcCHhhhccHHHH
Confidence 3555555556687763 4788899999999999999998884
No 127
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=28.03 E-value=1.7e+02 Score=26.55 Aligned_cols=74 Identities=20% Similarity=0.319 Sum_probs=49.8
Q ss_pred cCCCCCCCCCCCCcEEEEEEecCCCCeeecCCCeEEEEeeCHHHHHc-------CCeEEEecCCCcEEE----EecCCCc
Q 038604 228 PEKGNQEPGIIAADLIFIVDEKPHALYRRDGNDLVVGQEITLLEALT-------GKTLDLTTLDGRNLM----IPLTDIV 296 (315)
Q Consensus 228 ~g~G~~~~g~~~GDL~v~i~v~~h~~f~R~g~dL~~~~~Isl~eal~-------G~~~~i~tldG~~~~----i~i~~~~ 296 (315)
+.+|+. .+||++|.-++.||---+.-.-==+|..+|++.+++. -.-..|.|-.|.+|. +.|.+.+
T Consensus 73 ~~kGd~----L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTTKGNRiin~~GfAisPtv 148 (276)
T PF06675_consen 73 QAKGDV----LPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDTTKGNRIINHRGFAISPTV 148 (276)
T ss_pred HHcCCc----cCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEecCCCceeeccCCeEecccc
Confidence 345554 4789999999998754333222335667777777653 335678888776432 4567889
Q ss_pred CCCcEEEEc
Q 038604 297 KPGTEIVVP 305 (315)
Q Consensus 297 ~~g~~~~i~ 305 (315)
+.|+++|+.
T Consensus 149 KeGyILrvs 157 (276)
T PF06675_consen 149 KEGYILRVS 157 (276)
T ss_pred cceEEEEcC
Confidence 999999986
No 128
>smart00841 Elong-fact-P_C Elongation factor P, C-terminal. These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology PUBMED:15210970.
Probab=26.37 E-value=55 Score=22.42 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=17.4
Q ss_pred EEEEeCCCCCCCCEEEecCC
Q 038604 211 LTVEIKPGWKKGTKITFPEK 230 (315)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~ 230 (315)
++|.+|.-+..|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T smart00841 30 AVVQVPLFINEGDKIKVDTR 49 (56)
T ss_pred CEEEcCCcccCCCEEEEECC
Confidence 58999999999999988654
No 129
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=26.13 E-value=95 Score=22.09 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 21 KKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
.+.++..++.-||+.. ..+..+.|.+.|..|++.++...++.
T Consensus 13 ~~~~r~~~~~~~p~~~-------~~eisk~~g~~Wk~ls~eeK~~y~~~ 54 (77)
T cd01389 13 RQDKHAQLKTENPGLT-------NNEISRIIGRMWRSESPEVKAYYKEL 54 (77)
T ss_pred HHHHHHHHHHHCCCCC-------HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4566777788888764 24677889999999997776655444
No 130
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=24.96 E-value=1.6e+02 Score=19.77 Aligned_cols=39 Identities=18% Similarity=0.209 Sum_probs=27.3
Q ss_pred HHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhcc
Q 038604 24 YKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYDL 69 (315)
Q Consensus 24 yr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 69 (315)
.|.-.+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 15 ~r~~~~~~~p~~~-------~~~i~~~~~~~W~~ls~~eK~~y~~~ 53 (66)
T cd01390 15 QRPKLKKENPDAS-------VTEVTKILGEKWKELSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHCcCCC-------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3444556677743 35678889999999998776665554
No 131
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=23.14 E-value=1.2e+02 Score=24.49 Aligned_cols=51 Identities=18% Similarity=0.075 Sum_probs=34.1
Q ss_pred EEEEecCCCCeeecCCCeEEEEeeCHHHHHcCCeEEEecCCCcEEEEecCCCcCCCcE
Q 038604 244 FIVDEKPHALYRRDGNDLVVGQEITLLEALTGKTLDLTTLDGRNLMIPLTDIVKPGTE 301 (315)
Q Consensus 244 v~i~v~~h~~f~R~g~dL~~~~~Isl~eal~G~~~~i~tldG~~~~i~i~~~~~~g~~ 301 (315)
++|+|..+..+ .+|++-.+.|+|.+.+.+.. ++.+.++.+.....++.|++
T Consensus 60 L~v~V~dkd~~---~DD~lG~v~i~L~~v~~~~~----~~~~~Wy~L~~~~~~~~~~~ 110 (127)
T cd08394 60 LVIELWNKGLI---WDTLVGTVWIPLSTIRQSNE----EGPGEWLTLDSEVNMKNGQI 110 (127)
T ss_pred EEEEEEeCCCc---CCCceEEEEEEhHHcccCCC----CCCCccEecChHHhccCCeE
Confidence 44444445433 88999999999999888733 55666777774444555544
No 132
>cd05794 S1_EF-P_repeat_2 S1_EF-P_repeat_2: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-tRNA and puromycine in vitro. EF-P binds to both the 30S and 50S ribosomal subunits. EF-P binds near the streptomycine binding site of the 16S rRNA in the 30S subunit. EF-P interacts with domains 2 and 5 of the 23S rRNA. The L16 ribosomal protein of the 50S or its N-terminal fragment are required for EF-P mediated peptide bond synthesis, whereas L11, L15, and L7/L12 are not required in this reaction, suggesting that EF-P may function at a different ribosomal site than most other translation factors. EF-P is essential for cell viability and is required for protein synthesis. EF-P is mainly present in bacteria. The EF-P homologs in archaea and eukaryotes are the initiation factors aIF5A and eIF5A, respectively. EF-P
Probab=22.90 E-value=69 Score=21.92 Aligned_cols=20 Identities=25% Similarity=0.288 Sum_probs=17.6
Q ss_pred EEEEeCCCCCCCCEEEecCC
Q 038604 211 LTVEIKPGWKKGTKITFPEK 230 (315)
Q Consensus 211 ~~V~Ip~G~~~G~~i~~~g~ 230 (315)
++|.+|.-+..|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T cd05794 30 AEVQVPLFIKEGEKIKVDTR 49 (56)
T ss_pred CEEEcCCeecCCCEEEEECC
Confidence 57999999999999998754
No 133
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=22.89 E-value=47 Score=29.96 Aligned_cols=15 Identities=27% Similarity=0.691 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHhcC
Q 038604 45 EAKFKQISEAYDVLS 59 (315)
Q Consensus 45 ~~~f~~i~~Ay~~L~ 59 (315)
..++++||||+|+|.
T Consensus 127 RRRLkKVNEAFE~LK 141 (284)
T KOG3960|consen 127 RRRLKKVNEAFETLK 141 (284)
T ss_pred HHHHHHHHHHHHHHH
Confidence 357899999999985
No 134
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=22.69 E-value=1.8e+02 Score=22.19 Aligned_cols=52 Identities=17% Similarity=0.408 Sum_probs=31.0
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHhCCCCCCCcchhHHHHHHHHHHHHHHhcCChhhhhhhc-cccc
Q 038604 10 KVNRNAN-EDDLKKAYKRLAMIWHPDKNPSHKRTEAEAKFKQISEAYDVLSDPQKRQIYD-LYGE 72 (315)
Q Consensus 10 gv~~~as-~~eIk~ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD-~~G~ 72 (315)
|+++++. -.+|-+.++.++..+++ . ..+.+..+.+.| +.||.-+..|| .++.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~---~------~~~~~~~l~~~y--~~~~~~~~~~~~~~~~ 104 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTG---G------DPELLRGLAQMY--VEDPRFAAMYDKKFGP 104 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS------------HHHHHHHHHHT--TSTHHHHHHHG-GGST
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhC---C------CHHHHHHHHHHH--HcCHHHHhhccccCCH
Confidence 4555542 34466667777776665 1 135677788888 77888888888 5443
No 135
>COG2879 Uncharacterized small protein [Function unknown]
Probab=22.46 E-value=1.4e+02 Score=20.92 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=17.3
Q ss_pred HHHHHHHHhCCCCCCCcchhHHHHHHHHHHH
Q 038604 23 AYKRLAMIWHPDKNPSHKRTEAEAKFKQISE 53 (315)
Q Consensus 23 ayr~la~~~hPd~~~~~~~~~~~~~f~~i~~ 53 (315)
.|-+-+++.|||+.+- .-.+-|++-.+
T Consensus 27 nYVehmr~~hPd~p~m----T~~EFfrec~d 53 (65)
T COG2879 27 NYVEHMRKKHPDKPPM----TYEEFFRECQD 53 (65)
T ss_pred HHHHHHHHhCcCCCcc----cHHHHHHHHHH
Confidence 4666788999999863 23455555443
No 136
>PF02216 B: B domain; InterPro: IPR003132 This entry represents the immunoglobulin-binding domain found in the Staphylococcus aureus virulence factor protein A (SpA). Protein A contains five highly homologous Ig-binding domains in tandem (designated domains E, D, A, B and C), which share a common structure consisting of three helices in a closed left-handed twist. Protein A can exist in both secreted and membrane-bound forms, and has two distinct Ig-binding activities: each domain can bind Fc-gamma (the constant region of IgG involved in effector functions) and Fab (the Ig fragment responsible for antigen recognition) [].; GO: 0019865 immunoglobulin binding, 0009405 pathogenesis; PDB: 1EDL_A 1EDI_A 1EDJ_A 1EDK_A 2B88_A 2B87_A 2B89_A 1FC2_C 1DEE_H 1ZXG_A ....
Probab=20.67 E-value=1.4e+02 Score=20.14 Aligned_cols=29 Identities=14% Similarity=0.503 Sum_probs=18.2
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 038604 5 YYNILKVNRNANEDDLKKAYKRLAMIWHPDKN 36 (315)
Q Consensus 5 ~y~iLgv~~~as~~eIk~ayr~la~~~hPd~~ 36 (315)
||+||.++.- + +|=|..|-+ .++-||+..
T Consensus 13 FY~vl~~~nL-t-eeQrn~yI~-~lKddPs~s 41 (54)
T PF02216_consen 13 FYEVLHMPNL-T-EEQRNGYIQ-SLKDDPSRS 41 (54)
T ss_dssp HHHHHCSTTS---HHHHHHHHH-HHHH-GCCH
T ss_pred HHHHHcCCCc-C-HHHHHhHHH-HHhhChHHH
Confidence 7999987653 3 334667765 556788765
No 137
>PF11197 DUF2835: Protein of unknown function (DUF2835); InterPro: IPR021363 This is a bacterial family of uncharacterised proteins. One member of this family (A4VM42 from SWISSPROT) is annotated as the A subunit of Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV).
Probab=20.66 E-value=2.3e+02 Score=20.18 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=24.0
Q ss_pred EEEEeeCHHHHHc---CC--eEEEecCCCcEEEEec
Q 038604 262 VVGQEITLLEALT---GK--TLDLTTLDGRNLMIPL 292 (315)
Q Consensus 262 ~~~~~Isl~eal~---G~--~~~i~tldG~~~~i~i 292 (315)
+..+.||..+.+. |. .|.+.+.||++|.++.
T Consensus 2 ~f~l~is~~~~l~~Y~G~a~~V~v~s~~Gr~v~~Pa 37 (68)
T PF11197_consen 2 YFSLNISYQEFLAYYQGAASKVVVRSDDGRRVQFPA 37 (68)
T ss_pred EEEEEcCHHHHHHhccccccEEEEEecCCcEEEEeH
Confidence 4578888888874 53 7888999999777764
Done!