BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038606
(666 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8Q6|PP368_ARATH Putative pentatricopeptide repeat-containing protein At5g08310,
mitochondrial OS=Arabidopsis thaliana GN=At5g08310 PE=3
SV=1
Length = 832
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/671 (54%), Positives = 499/671 (74%), Gaps = 7/671 (1%)
Query: 1 MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
MASILSRAR+ A L+ L DV+ SRCFMSPGA GF IRCLG+ GLV+EA+ +FD+V+ G
Sbjct: 112 MASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMG 171
Query: 61 LCVPNNYSYNCLLEALCKS--CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
LCVPN Y+YNCLLEA+ KS SV+LVE RLKEM+D G+ +DK+TLTP+LQVYCN+G+ +
Sbjct: 172 LCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231
Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
+ALSVFNEI+ GW+DEH+ +IL+V+F KWG+VDKA ELIE +++ +IRLN KT+CVLIH
Sbjct: 232 RALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIH 291
Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
GFVK+SR+DKA QLF+KM + G +D A+YDV+IGGLCK+K LEMAL LY E+K SGI P
Sbjct: 292 GFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP 351
Query: 239 DFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
D IL KL+ S S+E EL+ + + I D D ++ LL S+ + N + +AY+ +Q
Sbjct: 352 DRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411
Query: 299 MI---KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
++ + + ++++ V++L + P++ S I+IN L+K K+D+A++L ++ Q G
Sbjct: 412 LMGNYESDGVSEI-VKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGL 470
Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
+ +YNN+I+G+C R EES +LL EM+++G +P+ FTLN ++ CL R D VGAL+
Sbjct: 471 IPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALD 530
Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
L++KMR G EPW+KH T L+K+LC++G+A++A ++L D+ EGFL +V +AAI GLI
Sbjct: 531 LLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLI 590
Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
+ VD LELFRDICA+G CPDV+AY+++I LCKA R EA+ LFNEM++KGL P+VA
Sbjct: 591 KNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVA 650
Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
TYN +I+GWCK G ID+ + C+ RM E E +PDVITYT+LI GLC +GRP +AI WNE
Sbjct: 651 TYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-NPDVITYTSLIHGLCASGRPSEAIFRWNE 709
Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELN 655
M+ K C PNRITFMALI GLCKC ALV+FR M+EK M+PD V+++L+S+FLS N
Sbjct: 710 MKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSEN 769
Query: 656 PPLAFEVLKEM 666
F + +EM
Sbjct: 770 INAGFGIFREM 780
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 139/525 (26%), Positives = 225/525 (42%), Gaps = 56/525 (10%)
Query: 46 VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
+++A LF++++R G+ + Y+ L+ LCK +++ E++ G D+ L
Sbjct: 299 IDKAFQLFEKMRRMGMNA-DIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILG 357
Query: 106 PLLQVYCNS-----------GQFDKAL------SVFNEIIDHGWVDEHVFSILLVAFSKW 148
LL + G DK S+F I + V E +S + +
Sbjct: 358 KLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHE-AYSFIQNLMGNY 416
Query: 149 GEVDKACELIERMDDCN--IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
E D E+++ + D N I + + ++I+ VK ++VD A+ L + ++G
Sbjct: 417 -ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPM 475
Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITP-DFE---ILSKLITSCSDEGELTLLVK- 261
MY+ II G+CK + E +L+L EMK +G+ P F I L C G L LL K
Sbjct: 476 MYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM 535
Query: 262 -----EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
E W + T L ++ L NG A L + +A G F
Sbjct: 536 RFYGFEPW----IKHTTFL----VKKLCENGRAVDACKYL------DDVAGEG------F 575
Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
G + +T++ D L+K+ +D L LFR++ G +V Y+ LI LC + R
Sbjct: 576 LGHMVASTAAID----GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTM 631
Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
E+ L EM G KPT T NSM C+ ++ L+ + +M P V T LI
Sbjct: 632 EADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI 691
Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
LC G+ EA +M + P+ + + A I GL AL FR++
Sbjct: 692 HGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEME 751
Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
PD Y ++S ++ + +F EM+ KG P N ++
Sbjct: 752 PDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 81/206 (39%), Gaps = 38/206 (18%)
Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
D+ AYN + S L +A++ A + L +++ S + I +G +D+A
Sbjct: 105 DMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVF 164
Query: 558 SRMLEKESGSPDVITYTTLIDGL------------------------------------- 580
R+ E P+ TY L++ +
Sbjct: 165 DRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVY 224
Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
C G+ + A+ ++NE+ +G I+ + L+ CK + A M++E+ ++ +
Sbjct: 225 CNTGKSERALSVFNEILSRGWLDEHISTI-LVVSFCKWGQVDKAFELIEMLEERDIRLNY 283
Query: 641 FVFVALISAFLSELNPPLAFEVLKEM 666
+ LI F+ E AF++ ++M
Sbjct: 284 KTYCVLIHGFVKESRIDKAFQLFEKM 309
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 191/661 (28%), Positives = 301/661 (45%), Gaps = 49/661 (7%)
Query: 33 LGFLIRCLGSVGLVEEANMLFDQVKREGL-CVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
G L + G +EEA +F GL VP LL+AL + +DL K
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFSS--SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 92 MQDYGWGYDKYTLTPLLQVYCNSGQF---------------------DKALSVFNEIIDH 130
M + +D T L+ +C +G D AL + +I
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 131 GWVD-EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKA 189
G V ++ + +L+ K ++ A L+ MD + L+ T+ +LI G +K D A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 190 LQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
L +M G MYD I + K +E A L+ M SG+ P + + LI
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
E + LLV+ + R++ ++++ + S+G +D AYN+++ MI
Sbjct: 392 YCREKNVRQGYELLVE--MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS--- 446
Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
PN + +I T L++ + A+ + +EM + G ++F YN+L
Sbjct: 447 -------------GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSL 493
Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
I GL + R++E+ L EM E+G KP FT + + A V++MR G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
P T LI E CK GK +EA MV +G L D Y+ + GL +VD A E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
+FR++ G PDV +Y ++I+G K + +A +F+EM+ +GL P+V YN+L+ G+C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
+SG I++A L M K P+ +TY T+IDG C +G +A L++EM+ KG P+
Sbjct: 674 RSGEIEKAKELLDEMSVK-GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
+ L+ G C+ + A+ F K KG F ALI+ L EVL
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 666 M 666
+
Sbjct: 792 L 792
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 156/632 (24%), Positives = 276/632 (43%), Gaps = 58/632 (9%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
VP Y+Y+ L++ LCK ++ + L EM G D +T + L+ D A
Sbjct: 274 VPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKG 333
Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
+ +E++ HG + +++ + SK G ++KA L + M + + + LI G+
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
++ V + +L +M K Y ++ G+C + L+ A + EM SG P+
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 242 ILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
I + LI + S G+ ++KE+ E + + NS++ L +D+A + L
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKE-QGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
M++ + PN ++ I+ ++ + A +EM + G + N
Sbjct: 513 MVEN----------------GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
L LI+ C ++ E+ R M + G T + L + V A + R
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
+MR +G P V +LI K G +A +MV+EG P+++ Y+ +GG
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
++ A EL ++ G P+ V Y II G CK+ +AEA LF+EM KGL+P Y
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 539 LLINGWCKSGNIDQAML----------------------------------CLSRMLE-- 562
L++G C+ ++++A+ L+R+++
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 563 -KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
G P+ +TY +ID LC G + A L+++M+ P IT+ +L+ G K R
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
F G++PD ++ +I+AFL E
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/673 (23%), Positives = 280/673 (41%), Gaps = 64/673 (9%)
Query: 5 LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
L + R + L ++V + P I + G++E+A LFD + GL +P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGL-IP 380
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
+Y L+E C+ +V L EM+ YT +++ C+SG D A ++
Sbjct: 381 QAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI- 439
Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
++ M R N + LI F++ S
Sbjct: 440 ---------------------------------VKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
R A+++ +M + G A D Y+ +I GL K K+++ A EM +G+ P+
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
I+ + E K + E R+ + +LC ++ G + +A + ++M+
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
+ D ++ +++N L K+ K+D A +FREM G +VF Y
Sbjct: 587 GILGD----------------AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSY 630
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
LI+G ++++ + EM E G P N + CR ++ A L+ +M V
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
+G P +I CK G EAFR +M +G +PD Y+ + G + V+
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL----IPSVATYN 538
A+ +F GC +N +I+ + K + ++ N ++ P+ TYN
Sbjct: 751 AITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
++I+ CK GN++ A +M + + P VITYT+L++G GR + +++E
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQM-QNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK-----GMKPDMFVFVALISAFLSE 653
G P+ I + +I K ALV M K G K + AL+S F
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 654 LNPPLAFEVLKEM 666
+A +V++ M
Sbjct: 929 GEMEVAEKVMENM 941
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 141/576 (24%), Positives = 235/576 (40%), Gaps = 69/576 (11%)
Query: 23 KSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSV 82
K +SP G +++ + S G ++ A + ++ G C PN Y L++ ++
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG-CRPNVVIYTTLIKTFLQNSRF 468
Query: 83 DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSIL 141
LKEM++ G D + L+ + + D+A S E++++G + +
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 142 LVAFSKWGEVDKACELIERMDDCNIRLNEKTFCV-LIHGFVKKSRVDKALQLFDKMTKSG 200
+ + + E A + ++ M +C + L K C LI+ + KK +V +A + M G
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGV-LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---T 257
DA Y V++ GL KN +++ A +++ EM+G GI PD LI S G + +
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM-IKGEPIADVGVEMLMIF 316
+ E+ E+ + ++ N ++ +G I++A LL M +KG
Sbjct: 648 SIFDEMVEE-GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-------------- 692
Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
+ PN ++ II+ K G L A LF EM G + + F+Y L+DG C N +E
Sbjct: 693 ---LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 749
Query: 377 ESY----------------------------------ELLREMEESGF----KPTHFTLN 398
+ E+L + + F KP T N
Sbjct: 750 RAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
M LC+ ++ A L +M+ P V T L+ K G+ E F + +
Sbjct: 810 IMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA 869
Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH-----GCCPDVVAYNIIISGLCKAQ 513
G PD + YS I + AL L + A GC + ++SG K
Sbjct: 870 GIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVG 929
Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
+ AE + M+ IP AT LIN C S N
Sbjct: 930 EMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 85/202 (42%), Gaps = 24/202 (11%)
Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
D V + G I ++ A+ +F P + +++ L + R+ D++
Sbjct: 150 DGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--------------- 567
M+ + ++ V TY++LI C++GN+ L + EKE +
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKT-EKEFRTATLNVDGALKLKESM 268
Query: 568 ------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
P TY LIDGLC R +DA L EM+ G + + T+ LI GL K
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNA 328
Query: 622 RAA--LVHFRMMKEKGMKPDMF 641
AA LVH + +KP M+
Sbjct: 329 DAAKGLVHEMVSHGINIKPYMY 350
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/558 (29%), Positives = 276/558 (49%), Gaps = 28/558 (5%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ D A+++F E++ + FS LL A +K + D L E+M + I N T+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
+LI+ F ++S++ AL + KM K G+ + ++ G C +K++ A+ L +M +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 235 GITPDFEILSKLITSC---SDEGELTLLVKEIWE---DRDVNTMTLLCNSIMRILVSNGS 288
G P+ + LI + E L+ + D+ T ++ N L G
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG----LCKRGD 236
Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
D A+NLL M +G+ + P ++ II+ L K +D AL+LF+
Sbjct: 237 TDLAFNLLNKMEQGK----------------LEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
EM G NV Y++LI LCN R ++ LL +M E P FT +++ +
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
+V A L +M + +P + + LI C H + EA + MV + PD+V Y+
Sbjct: 341 KLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
I G KRV+ +E+FR++ G + V YNI+I GL +A A+++F EM++
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
G+ P++ TYN L++G CK+G +++AM+ L++ P + TY +I+G+C AG+ +D
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
L+ + KG P+ + + +I+G C+ A F+ MKE G P+ + LI
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 649 AFLSELNPPLAFEVLKEM 666
A L + + + E++KEM
Sbjct: 580 ARLRDGDREASAELIKEM 597
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 159/584 (27%), Positives = 270/584 (46%), Gaps = 32/584 (5%)
Query: 16 VLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNN-YSYNCLLE 74
L ++VKSR F S L+ + + + L +Q++ G +P+N Y+Y+ L+
Sbjct: 67 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG--IPHNHYTYSILIN 124
Query: 75 ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
C+ + L L +M G+ + TL+ LL YC+S + +A+++ +++ G+
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
V F+ L+ + +A LI+RM + + T+ V+++G K+ D A L
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
+KM + +Y+ II GLCK K ++ AL L+ EM+ GI P+ S LI+ +
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 254 G---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
G + + L+ ++ E R +N ++++ V G + +A L M+K
Sbjct: 305 GRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-------- 355
Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
++ P+ ++ +IN +LD A +F M C +V YN LI G C
Sbjct: 356 --------SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
R+EE E+ REM + G T N + + L + D A + ++M G P +
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 431 HNTLLIKELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
L+ LCK+GK AM F +L E P I Y+ I G+ +V+ +LF
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
++ G PDVVAYN +ISG C+ EA+ LF EM G +P+ YN LI +
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
G+ + + + M + G + L+ + GR D + +
Sbjct: 585 GDREASAELIKEM--RSCGFAGDASTIGLVTNMLHDGRLDKSFL 626
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 116/249 (46%), Gaps = 5/249 (2%)
Query: 10 RIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSY 69
R+ + + + +V CF LI+ VEE +F ++ + GL V N +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL-VGNTVTY 434
Query: 70 NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
N L++ L ++ D+ + KEM G + T LL C +G+ +KA+ VF E +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQ 493
Query: 130 HGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
++ + ++I++ K G+V+ +L + ++ + + +I GF +K +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
+A LF +M + G ++ Y+ +I ++ E + +L EM+ G D + L+
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LV 612
Query: 248 TSCSDEGEL 256
T+ +G L
Sbjct: 613 TNMLHDGRL 621
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 168/614 (27%), Positives = 278/614 (45%), Gaps = 91/614 (14%)
Query: 89 LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
+++ + Y K ++ L N + D A+++F +++ V FS LL A +K
Sbjct: 39 VRDFSGVRYDYRKISINRL-----NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAK 93
Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
+ D L E+M + I N T+ +LI+ F ++S++ AL + KM K G+ D
Sbjct: 94 MNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 153
Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
+ ++ G C ++ A+ L +M G PD
Sbjct: 154 LNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD---------------------------- 185
Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
+ N+++ L + +A L+ M+ KG P+ ++
Sbjct: 186 -----SFTFNTLIHGLFRHNRASEAVALVDRMV---------------VKG-CQPDLVTY 224
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
I++N L K G +DLALSL ++M Q V +YN +ID LCN + ++ L EM+
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
G +P T NS+ RCLC A L+ M + P V + LI K GK +E
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
A + +M++ PDI YS+ I G R+D A +F + + C P+VV YN +I
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 508 GLCKAQRVAEAEDLFNEMITKGLI-----------------------------------P 532
G CKA+RV E +LF EM +GL+ P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
+ TY++L++G C +G ++ A++ L++ PD+ TY +I+G+C AG+ +D L
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFE-YLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
+ + KG PN +T+ +++G C+ A FR MKE+G PD + LI A L
Sbjct: 524 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Query: 653 ELNPPLAFEVLKEM 666
+ + + E+++EM
Sbjct: 584 DGDKAASAELIREM 597
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 265/544 (48%), Gaps = 22/544 (4%)
Query: 37 IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
I L + L + N+ D VK P+ ++ LL A+ K DLV ++MQ+ G
Sbjct: 54 INRLNDLKLDDAVNLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111
Query: 97 WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
++ YT + L+ +C Q AL+V +++ G+ + V + LL F + A
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
L+ +M + + + TF LIHG + +R +A+ L D+M G D Y +++ GL
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMT 273
CK +++AL L +M+ I P I + +I + + + + E ++ +
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
+ NS++R L + G A LL MI+ + ++PN +F +I+
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERK----------------INPNVVTFSALIDA 335
Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
+K+GKL A L+ EM + ++F Y++LI+G C +RL+E+ + M P
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
T N++ + C+ + V + L R+M +G T LI + + A
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
MV +G LPDI+ YS + GL + +V+ AL +F + PD+ YNI+I G+CKA
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
+V + DLF + KG+ P+V TY +++G+C+ G ++A L R +++E PD TY
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD-ALFREMKEEGPLPDSGTY 574
Query: 574 TTLI 577
TLI
Sbjct: 575 NTLI 578
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 246/537 (45%), Gaps = 22/537 (4%)
Query: 17 LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
L D+VKSR F S L+ + + + L +Q++ G+ N Y+Y+ L+
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSILINCF 126
Query: 77 CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
C+ + L L +M G+ D TL LL +C+ + A+S+ ++++ G+ D
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
F+ L+ + +A L++RM + + T+ ++++G K+ +D AL L K
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
M + +Y+ II LC K + AL L++EM GI P+ + LI + G
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 255 --ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
+ + L+ ++ E R +N + ++++ V G + +A L MIK
Sbjct: 307 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---------- 355
Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
++ P+ ++ +IN +LD A +F M C NV YN LI G C +
Sbjct: 356 ------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
R++E EL REM + G T ++ + ++ A + ++M G P +
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
++L+ LC +GK A + + PDI Y+ I G+ +V+ +LF +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
G P+VV Y ++SG C+ EA+ LF EM +G +P TYN LI + G+
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 173/622 (27%), Positives = 296/622 (47%), Gaps = 33/622 (5%)
Query: 5 LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
L R+ ++ + +D+ SRC M LI L +E + D + E P
Sbjct: 93 LGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKP 152
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
+ + YN +L L S+ LVE+ +M +G D T L++ C + Q A+ +
Sbjct: 153 DTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILML 212
Query: 125 NEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
++ +G V DE F+ ++ + + G++D A + E+M + + + V++HGF K+
Sbjct: 213 EDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKE 272
Query: 184 SRVDKALQLFDKMT-KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
RV+ AL +M+ + GF D ++ ++ GLCK ++ A+++ M G PD
Sbjct: 273 GRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYT 332
Query: 243 LSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
+ +I+ GE+ V+ + + RD + T+ N+++ L +++A L + +
Sbjct: 333 YNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
KG + P+ +F+ +I L +A+ LF EM GC + F
Sbjct: 393 S---------------KGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
YN LID LC+ +L+E+ +L++ME SG + T N++ C+ A + +M
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 421 RVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI-----GGL 474
V G V +NTL I LCK + +A + + M+ EG PD Y++ + GG
Sbjct: 497 EVHGVSRNSVTYNTL-IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG- 554
Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
DIK+ A ++ + + ++GC PD+V Y +ISGLCKA RV A L + KG+ +
Sbjct: 555 -DIKK---AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTP 610
Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP-DDAIMLW 593
YN +I G + +A+ MLE+ PD ++Y + GLC G P +A+
Sbjct: 611 HAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Query: 594 NEMEEKGCAPNRITFMALITGL 615
E+ EKG P + L GL
Sbjct: 671 VELLEKGFVPEFSSLYMLAEGL 692
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 248/571 (43%), Gaps = 60/571 (10%)
Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD-- 194
++ +L+ + G D +++E M + TF +LI + + D+ L + D
Sbjct: 85 LYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWM 144
Query: 195 ----------------------------------KMTKSGFASDAAMYDVIIGGLCKNKQ 220
KM+ G D + ++V+I LC+ Q
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 221 LEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMTLLCNS 278
L A+ + +M G+ PD + + ++ +EG+L L ++E + + + N
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
I+ G ++ A N +Q M + P+ +F+ ++N L K G
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFF---------------PDQYTFNTLVNGLCKAG 309
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
+ A+ + M Q G +V+ YN++I GLC ++E+ E+L +M P T N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC---KHGKAMEAFRFLTDM 455
++ LC+ V A L R + +G P V LI+ LC H AME F +M
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE---EM 426
Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
+G PD Y+ I L ++D AL + + + GC V+ YN +I G CKA +
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
EAE++F+EM G+ + TYN LI+G CKS ++ A + +M+ E PD TY +
Sbjct: 487 REAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMI-MEGQKPDKYTYNS 545
Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
L+ C G A + M GC P+ +T+ LI+GLCK R A R ++ KG
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
+ + +I + A + +EM
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 167/648 (25%), Positives = 286/648 (44%), Gaps = 69/648 (10%)
Query: 52 LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
LF+ ++ P Y +L L +S S D ++ L++M+ T L++ Y
Sbjct: 69 LFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY 128
Query: 112 CNSGQFDKALSVFNEIID------------------------------HG----W---VD 134
D+ LSV + +ID H W D
Sbjct: 129 AQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPD 188
Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
F++L+ A + ++ A ++E M + +EKTF ++ G++++ +D AL++ +
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIRE 248
Query: 195 KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS-GITPDFEILSKLITSCSDE 253
+M + G + +VI+ G CK ++E AL EM G PD + L+
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 254 GE-------LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
G + ++++E + D DV T NS++ L G + +A +L MI +
Sbjct: 309 GHVKHAIEIMDVMLQEGY-DPDVYTY----NSVISGLCKLGEVKEAVEVLDQMITRD--- 360
Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
SPNT +++ +I+TL K+ +++ A L R +T G + +V +N+LI
Sbjct: 361 -------------CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
GLC + + EL EM G +P FT N + LC + + ALN++++M + G
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
V LI CK K EA +M G + V Y+ I GL +RV+ A +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
+ G PD YN +++ C+ + +A D+ M + G P + TY LI+G CK
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAPNR 605
+G ++ A L R ++ + + Y +I GL + +AI L+ EM E+ P+
Sbjct: 588 AGRVEVASKLL-RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 606 ITFMALITGLCKCDRP-RAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
+++ + GLC P R A+ + EKG P+ L L+
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLT 694
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 222/467 (47%), Gaps = 22/467 (4%)
Query: 189 ALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI---TPDFEILS 244
AL+LF+ +K F+ + A+Y+ I+ L ++ + ++ +MK S T F IL
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
+ + E+ +V + ++ + T N ++ +LV S+
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLK-------------- 171
Query: 305 IADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
+ ++ + ++ + P+ S+F+++I L + +L A+ + +M G + + +
Sbjct: 172 LVEISHAKMSVWG--IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTT 229
Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQ- 423
++ G L+ + + +M E G ++ ++N + C+ V ALN +++M Q
Sbjct: 230 VMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQD 289
Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
G P L+ LCK G A + M+QEG+ PD+ Y++ I GL + V A
Sbjct: 290 GFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEA 349
Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
+E+ + C P+ V YN +IS LCK +V EA +L + +KG++P V T+N LI G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
C + N AM M K PD TY LID LC G+ D+A+ + +ME GCA
Sbjct: 410 LCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+ IT+ LI G CK ++ R A F M+ G+ + + LI
Sbjct: 469 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 173/357 (48%), Gaps = 13/357 (3%)
Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
K SP + ++ I+ L + G D + +M C + LI+ +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 377 ESYELLREM-EESGFKP-THFTLNSMFRCLCRRQDVVGALNLVR----KMRVQGHEPWVK 430
E ++ M +E G KP THF N M L +L LV KM V G +P V
Sbjct: 136 EILSVVDWMIDEFGLKPDTHF-YNRMLNLLVDGN----SLKLVEISHAKMSVWGIKPDVS 190
Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
+LIK LC+ + A L DM G +PD ++ + G I+ +D AL + +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGN 549
GC V+ N+I+ G CK RV +A + EM + G P T+N L+NG CK+G+
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
+ A+ + ML+ E PDV TY ++I GLC G +A+ + ++M + C+PN +T+
Sbjct: 311 VKHAIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
LI+ LCK ++ A R++ KG+ PD+ F +LI N +A E+ +EM
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 168/579 (29%), Positives = 274/579 (47%), Gaps = 31/579 (5%)
Query: 96 GWGYDKY----TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
G YD Y + LL + + D+A+ +F E++ V FS LL A +K +
Sbjct: 26 GLSYDGYREKLSRNALLHL-----KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK 80
Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
D E+M+ + N T+ ++I+ ++S++ AL + KM K G+ +
Sbjct: 81 FDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS 140
Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTLLVKEIWEDR 267
++ G C ++ A+ L +M G PD F L + + E LV+ + +
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV-K 199
Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
+ +++ L G D A NLL M KG+ ADV + +
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI----------------Y 243
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
+I++L K +D AL+LF EM G +VF Y++LI LCN R ++ LL +M E
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
P T NS+ + ++ A L +M + +P + LI C H + E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
A + T MV + LPD+V Y+ I G K+V +ELFRD+ G + V Y +I
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
G +A A+ +F +M++ G+ P++ TYN L++G CK+G +++AM+ L+K
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKSKME 482
Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
PD+ TY + +G+C AG+ +D L+ + KG P+ I + +I+G CK A
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
F MKE G PD + LI A L + + + E++KEM
Sbjct: 543 FIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/603 (28%), Positives = 279/603 (46%), Gaps = 59/603 (9%)
Query: 17 LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD-QVKREGLCVPNN-YSYNCLLE 74
L ++VKSR F P + F + L ++ +++ +++ K E L V +N Y+YN ++
Sbjct: 52 LFGEMVKSRPF--PSIVEF-SKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 75 ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
LC+ + L +M G+G TL LL +C+ + +A+++ +++++ G+
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
+ V F+ L+ + + +A L+ERM + + T+ +I+G K+ D AL L
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDE 253
+KM K +D +Y +I LCK + ++ AL L++EM GI PD S LI SC
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI-SC--- 284
Query: 254 GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEML 313
LCN G A LL M++ +
Sbjct: 285 ---------------------LCNY--------GRWSDASRLLSDMLERK---------- 305
Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
++PN +F+ +I+ K+GKL A LF EM Q N+ YN+LI+G C +
Sbjct: 306 ------INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
RL+E+ ++ M P T N++ C+ + VV + L R M +G T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
LI + A MV +G P+I+ Y+ + GL +++ A+ +F +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
PD+ YNI+ G+CKA +V + DLF + KG+ P V YN +I+G+CK G ++A
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 554 MLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
+M KE G PD TY TLI G + L EM A + T+ L+
Sbjct: 540 YTLFIKM--KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLV 596
Query: 613 TGL 615
T +
Sbjct: 597 TDM 599
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/598 (26%), Positives = 281/598 (46%), Gaps = 60/598 (10%)
Query: 21 VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
V K F+S ++R G + L +++ C P SYN +LE L
Sbjct: 143 VFKESLFIS------IMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 81 SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FS 139
+ +M +T +++ +C + D ALS+ ++ HG V V +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
L+ + SK V++A +L+E M + +TF +I G K R+++A ++ ++M
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLL 259
GFA D Y ++ GLCK +++ A L+ + P EI+
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI------PKPEIV---------------- 354
Query: 260 VKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGT 319
+ N+++ V++G +D A +L M+ I
Sbjct: 355 ---------------IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV------------- 386
Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
P+ +++ +I K+G + LAL + +M GC NV+ Y L+DG C +++E+Y
Sbjct: 387 --PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
+L EM G KP N + C+ + A+ + R+M +G +P V LI L
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
C+ + A L DM+ EG + + V Y+ I + + A +L ++ G D
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSR 559
+ YN +I GLC+A V +A LF +M+ G PS + N+LING C+SG +++A+
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKE 624
Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
M+ + S +PD++T+ +LI+GLC AGR +D + ++ +++ +G P+ +TF L++ LCK
Sbjct: 625 MVLRGS-TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 236/513 (46%), Gaps = 55/513 (10%)
Query: 137 VFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKM 196
F +++ AF E+D A L+ M N + LIH K +RV++ALQL ++M
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEM 278
Query: 197 TKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL 256
G DA ++ +I GLCK ++ A ++ + M G PD
Sbjct: 279 FLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD----------------- 321
Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
D+ T L N + +I G +D A +L + K
Sbjct: 322 -----------DI-TYGYLMNGLCKI----GRVDAAKDLFYRIPK--------------- 350
Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM-TQIGCMQNVFLYNNLIDGLCNSNRL 375
P F+ +I+ + G+LD A ++ +M T G + +V YN+LI G +
Sbjct: 351 -----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
+ E+L +M G KP ++ + C+ + A N++ +M G +P L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
I CK + EA +M ++G PD+ +++ I GL ++ + AL L RD+ + G
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
+ V YN +I+ + + EA L NEM+ +G TYN LI G C++G +D+A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
+ML ++ +P I+ LI+GLC +G ++A+ EM +G P+ +TF +LI GL
Sbjct: 586 LFEKML-RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
C+ R L FR ++ +G+ PD F L+S
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 150/552 (27%), Positives = 259/552 (46%), Gaps = 59/552 (10%)
Query: 32 ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
G +++ +V ++ A L + + G CVPN+ Y L+ +L K V+ L+E
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHG-CVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 92 MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGE 150
M G D T ++ C + ++A + N ++ G+ D+ + L+ K G
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQ-LFDKMTKSGFASDAAMYD 209
VD A +L R+ I + F LIHGFV R+D A L D +T G D Y+
Sbjct: 338 VDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
+I G K + +AL++ +M+ G P+ V
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPN-----------------------------V 424
Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
+ T+L + ++ G ID+AYN+L M AD + PNT F+
Sbjct: 425 YSYTILVDGFCKL----GKIDEAYNVLNEMS-----AD-----------GLKPNTVGFNC 464
Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
+I+ K+ ++ A+ +FREM + GC +V+ +N+LI GLC + ++ + LLR+M G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGKAMEA 448
T N++ RR ++ A LV +M QG + +N+L IK LC+ G+ +A
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL-IKGLCRAGEVDKA 583
Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
M+++G P + + I GL V+ A+E +++ G PD+V +N +I+G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
LC+A R+ + +F ++ +G+ P T+N L++ CK G + A L L +E + P
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE-DGFVP 702
Query: 569 DVITYTTLIDGL 580
+ T++ L+ +
Sbjct: 703 NHRTWSILLQSI 714
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 230/486 (47%), Gaps = 26/486 (5%)
Query: 186 VDKALQLFD-KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
V +++LF +++G+ +Y V+IG L N + + +L +MK GI +
Sbjct: 91 VSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFI 150
Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLL---CNSIMRILVSNGSIDQAYNLLQAMIK 301
++ G + + E R+V + N ++ ILVS A N+ M+
Sbjct: 151 SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLS 210
Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
+ + P +F +++ ++D ALSL R+MT+ GC+ N +
Sbjct: 211 RK----------------IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI 254
Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
Y LI L NR+ E+ +LL EM G P T N + LC+ + A +V +M
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
++G P L+ LCK G+ A D+ P+IV ++ I G + R+D
Sbjct: 315 IRGFAPDDITYGYLMNGLCKIGRVDAA----KDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 482 LALELFRD-ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLL 540
A + D + ++G PDV YN +I G K V A ++ ++M KG P+V +Y +L
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTIL 430
Query: 541 INGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
++G+CK G ID+A L+ M + P+ + + LI C R +A+ ++ EM KG
Sbjct: 431 VDGFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 601 CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAF 660
C P+ TF +LI+GLC+ D + AL R M +G+ + + LI+AFL A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 661 EVLKEM 666
+++ EM
Sbjct: 550 KLVNEM 555
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 261/553 (47%), Gaps = 52/553 (9%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ D A+ +F +++ V FS LL A +K + D L E+M + I N T+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
+ I+ F ++S++ AL + KM K G+ + ++ G C ++ A+ L +M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
G PD + L+ +
Sbjct: 175 GYQPDTVTFTTLV---------------------------------------------HG 189
Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
L Q E +A V M+ KG P+ ++ +IN L K G+ DLAL+L +M +
Sbjct: 190 LFQHNKASEAVALVE---RMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
+V +YN +IDGLC ++++++L +ME G KP FT N + CLC A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF-LPDIVCYSAAIGG 473
L+ M + P + LI K GK +EA + +MV+ PD+V Y+ I G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
KRV+ +E+FR++ G + V Y +I G +A+ A+ +F +M++ G+ P
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
+ TYN+L++G C +GN++ A++ M +K D++TYTT+I+ LC AG+ +D L+
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYM-QKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
+ KG PN +T+ +++G C+ A F MKE G P+ + LI A L +
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 654 LNPPLAFEVLKEM 666
+ + E++KEM
Sbjct: 545 GDEAASAELIKEM 557
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/535 (27%), Positives = 240/535 (44%), Gaps = 52/535 (9%)
Query: 17 LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
L D+VKSR F S L+ + + + L +Q++ G+ N Y+Y+ +
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS-HNLYTYSIFINYF 120
Query: 77 CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH 136
C+ + L L +M G+G TL LL +C+ + +A+++ +++++ G+ +
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 137 V-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
V F+ L+ + + +A L+ERM + + T+ +I+G K+ D AL L +K
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
M K +D +Y+ II GLCK K ++ A L+++M+ GI PD + LI SC
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI-SC----- 294
Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
LCN G A LL M++
Sbjct: 295 -------------------LCNY--------GRWSDASRLLSDMLEK------------- 314
Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNR 374
++P+ F+ +I+ +K+GKL A L+ EM + C +V YN LI G C R
Sbjct: 315 ---NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
+EE E+ REM + G T ++ + +D A + ++M G P + +
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
L+ LC +G A M + DIV Y+ I L +V+ +LF + G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
P+VV Y ++SG C+ EA+ LF EM G +P+ TYN LI + G+
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGD 546
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 190/424 (44%), Gaps = 51/424 (12%)
Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
++ R ++ + +D A L M+K P P+ F +++ + K
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPF----------------PSIVEFSKLLSAIAKM 88
Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
K DL +SL +M +G N++ Y+ I+ C ++L + +L +M + G+ P+ TL
Sbjct: 89 NKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTL 148
Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
NS+ C + A+ LV +M G++P T L+ L +H KA EA + MV
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
+G PD+V Y A I GL DLAL L + DVV YN II GLCK + + +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS---------- 567
A DLFN+M TKG+ P V TYN LI+ C G A LS MLEK
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 568 -------------------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
PDV+ Y TLI G C R ++ + ++ EM ++G
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
N +T+ LI G + A + F+ M G+ PD+ + L+ + N A V
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 663 LKEM 666
+ M
Sbjct: 449 FEYM 452
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 258/536 (48%), Gaps = 51/536 (9%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ D A+ +F E++ + V F+ LL A +K + D L ERM + I + ++
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
+LI+ F ++S++ AL + KM K G+ D ++ G C K++ A+ L +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
P NT+T N+++ L + +A
Sbjct: 180 EYQP-------------------------------NTVTF--NTLIHGLFLHNKASEAVA 206
Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
L+ M+ +G P+ ++ ++N L K G +DLALSL ++M +
Sbjct: 207 LIDRMVA---------------RG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
+V +Y +ID LCN + ++ L EM+ G +P T NS+ RCLC A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
L+ M + P V + LI K GK +EA + +M++ PDI YS+ I G
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
R+D A +F + + C P+VV YN +I G CKA+RV E +LF EM +GL+ +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
TYN LI G ++G+ D A +M+ + PD+ITY+ L+DGLC G+ + A++++
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVS-DGVPPDIITYSILLDGLCKYGKLEKALVVFE 489
Query: 595 EMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+++ P+ T+ +I G+CK + F + KG+KP++ ++ +IS F
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/558 (28%), Positives = 265/558 (47%), Gaps = 24/558 (4%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P+ +N LL A+ K DLV + MQ+ YD Y+ L+ +C Q AL+
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
V +++ G+ + V S LL + + +A L+++M + N TF LIHG
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
++ +A+ L D+M G D Y ++ GLCK +++AL L +M+ I D
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 242 ILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
I + +I + + + + E ++ + + NS++R L + G A LL M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
I+ + ++PN +F +I+ +K+GKL A L+ EM + ++
Sbjct: 317 IERK----------------INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
F Y++LI+G C +RL+E+ + M P T N++ + C+ + V + L R+
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 420 MRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
M +G V +NTL I+ L + G A + MV +G PDI+ YS + GL
Sbjct: 421 MSQRGLVGNTVTYNTL-IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
+++ AL +F + PD+ YNI+I G+CKA +V + DLF + KG+ P+V Y
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
+I+G+C+ G ++A M KE G+ P+ TY TLI G + L EM
Sbjct: 540 TMISGFCRKGLKEEADALFREM--KEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 598 EKGCAPNRITFMALITGL 615
G + T +I L
Sbjct: 598 SCGFVGDASTISMVINML 615
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 167/403 (41%), Gaps = 69/403 (17%)
Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
+L D KLD A+ LF EM Q + ++ +N L+ + N+ + L M+
Sbjct: 54 NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY 113
Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
++ N + C CRR + AL ++ KM G+EP + + L+ C + EA +
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
M + P+ V ++ I GL + A+ L + A GC PD+ Y +++GLCK
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 513 -----------------------------------QRVAEAEDLFNEMITKGLIPSVATY 537
+ V +A +LF EM KG+ P+V TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 538 NLLINGWCKSGNIDQAMLCLSRMLE----------------------------------K 563
N LI C G A LS M+E K
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 564 ESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRA 623
S PD+ TY++LI+G C+ R D+A ++ M K C PN +T+ LI G CK R
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 624 ALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
+ FR M ++G+ + + LI + +A ++ K+M
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 193/433 (44%), Gaps = 22/433 (5%)
Query: 48 EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
EA L D++ G C P+ ++Y ++ LCK +DL LK+M+ D T +
Sbjct: 203 EAVALIDRMVARG-CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
+ CN + AL++F E+ + G V ++ L+ +G A L+ M + I
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
N TF LI FVK+ ++ +A +L+D+M K D Y +I G C + +L+ A
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 381
Query: 227 LYSEMKGSGITPDFEILSKLITS-CSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRIL 283
++ M P+ + LI C + E L +E+ + R + T+ N++++ L
Sbjct: 382 MFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTVTYNTLIQGL 440
Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
G D A + + M+ V P+ ++ I+++ L K GKL+ A
Sbjct: 441 FQAGDCDMAQKIFKKMVSD----------------GVPPDIITYSILLDGLCKYGKLEKA 484
Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
L +F + + +++ YN +I+G+C + ++E+ ++L + G KP +M
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
CR+ A L R+M+ G P LI+ + G + + +M GF+ D
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Query: 464 IVCYSAAIGGLID 476
S I L D
Sbjct: 605 ASTISMVINMLHD 617
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 159/351 (45%), Gaps = 29/351 (8%)
Query: 36 LIRCLGSVGLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
LIRCL + G +A+ +L D ++R+ PN +++ L++A K + E EM
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 95 YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
D +T + L+ +C + D+A +F +I V ++ L+ F K V++
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
EL M + N T+ LI G + D A ++F KM G D Y +++
Sbjct: 414 GMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD 473
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
GLCK +LE AL ++ ++ S + PD + +I G+ V++ W+
Sbjct: 474 GLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK----VEDGWD-------- 521
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK-----GTVSPNTSSFD 328
L C+ ++ + N I MI G + E +F+ GT+ PN+ +++
Sbjct: 522 LFCSLSLKGVKPNVII------YTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYN 574
Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
+I L+DG + L +EM G + + + +I+ L + RLE+SY
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 2/233 (0%)
Query: 21 VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
++ CF + LI+ VEE LF ++ + GL V N +YN L++ L ++
Sbjct: 386 MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL-VGNTVTYNTLIQGLFQAG 444
Query: 81 SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
D+ + K+M G D T + LL C G+ +KAL VF + D + ++
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
I++ K G+V+ +L + ++ N + +I GF +K ++A LF +M +
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
G ++ Y+ +I ++ + +L EM+ G D +S +I D
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 167/604 (27%), Positives = 268/604 (44%), Gaps = 84/604 (13%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P +N L A+ ++ DLV K M+ G +D YT+T ++ YC + A S
Sbjct: 67 LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFS 126
Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
V G+ + + TF L++GF
Sbjct: 127 VLGRAWKLGYEPDTI----------------------------------TFSTLVNGFCL 152
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
+ RV +A+ L D+M + D +I GLC ++ AL L M G PD
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPD--- 209
Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
E+T ++ L +G+ A +L + M
Sbjct: 210 ------------EVTY------------------GPVLNRLCKSGNSALALDLFRKM--- 236
Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
+ + + + I+I++L KDG D ALSLF EM G +V Y
Sbjct: 237 -------------EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
++LI GLCN + ++ ++LREM P T +++ + ++ A L +M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
+G P LI CK EA + MV +G PDIV YS I KRVD
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDD 403
Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
+ LFR+I + G P+ + YN ++ G C++ ++ A++LF EM+++G+ PSV TY +L++
Sbjct: 404 GMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLD 463
Query: 543 GWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
G C +G +++A+ +M +K + + Y +I G+C A + DDA L+ + +KG
Sbjct: 464 GLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
P+ +T+ +I GLCK A + FR MKE G PD F + LI A L + E+
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 663 LKEM 666
++EM
Sbjct: 583 IEEM 586
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 218/483 (45%), Gaps = 21/483 (4%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
P+ +++ L+ C V + M + D T++ L+ C G+ +AL +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 124 FNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
+ ++++G+ DE + +L K G A +L +M++ NI+ + + ++I K
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
D AL LF++M G +D Y +IGGLC + + + ++ EM G I PD
Sbjct: 258 DGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT 317
Query: 243 LSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
S LI EG+L L KE++ + R + T+ NS++ + +A +
Sbjct: 318 FSALIDVFVKEGKL-LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD-- 374
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
LM+ KG P+ ++ I+IN+ K ++D + LFRE++ G + N
Sbjct: 375 -------------LMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 420
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
YN L+ G C S +L + EL +EM G P+ T + LC ++ AL + K
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
M+ + ++I +C K +A+ + +G PD+V Y+ IGGL
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
+ A LFR + GC PD YNI+I + + +L EM G +T +
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 540 LIN 542
+I+
Sbjct: 601 VID 603
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 171/362 (47%), Gaps = 17/362 (4%)
Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
++ A +L ++MI+ P+ P F+ + + + + + DL L +
Sbjct: 51 VNDAIDLFESMIQSRPL----------------PTPIDFNRLCSAVARTKQYDLVLGFCK 94
Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
M G +++ +I+ C +L ++ +L + G++P T +++ C
Sbjct: 95 GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEG 154
Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
V A+ LV +M P + + LI LC G+ EA + MV+ GF PD V Y
Sbjct: 155 RVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYG 214
Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
+ L LAL+LFR + VV Y+I+I LCK +A LFNEM K
Sbjct: 215 PVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
G+ V TY+ LI G C G D L M+ + PDV+T++ LID G+ +
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNI-IPDVVTFSALIDVFVKEGKLLE 333
Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
A L+NEM +G AP+ IT+ +LI G CK + A F +M KG +PD+ + LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 649 AF 650
++
Sbjct: 394 SY 395
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 214/456 (46%), Gaps = 35/456 (7%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
LI L G V EA +L D++ G P+ +Y +L LCKS + L ++M++
Sbjct: 181 LINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEER 239
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
+ ++ C G FD ALS+FNE+ G D +S L+ G+ D
Sbjct: 240 NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDG 299
Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
+++ M NI + TF LI FVK+ ++ +A +L+++M G A D Y+ +I G
Sbjct: 300 AKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG 359
Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDV 269
CK L A Q++ M G PD S LI S C D+G L +EI + +
Sbjct: 360 FCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG--MRLFREI-SSKGL 416
Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMI-KGEPIADVGVEMLMIFKGTVSPNTSSFD 328
T+ N+++ +G ++ A L Q M+ +G P P+ ++
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP-----------------PSVVTYG 459
Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
I+++ L +G+L+ AL +F +M + + +YN +I G+CN++++++++ L + +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
G KP T N M LC++ + A L RKM+ G P +LI+ + +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDI---KRVD 481
+ +M GF D S+ I +ID+ +R+D
Sbjct: 580 VELIEEMKVCGFSAD----SSTIKMVIDMLSDRRLD 611
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 158/587 (26%), Positives = 268/587 (45%), Gaps = 86/587 (14%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ D A+ +F +++ V F+ LL A +K + + L E+M I + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
+ I+ F ++S++ AL + KM K G+ D ++ G C +K++ A+ L +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
G PD T +++ L + +A
Sbjct: 183 GYKPD---------------------------------TFTFTTLIHGLFLHNKASEAVA 209
Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
L+ M++ +G P+ ++ ++N L K G +DLALSL ++M +
Sbjct: 210 LVDQMVQ---------------RG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK 253
Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
+V +YN +IDGLC ++++ L EM+ G +P FT +S+ CLC A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
L+ M + P V + LI K GK +EA + +M++ PDI YS+ I G
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI--- 531
R+D A +F + + C P+VV Y+ +I G CKA+RV E +LF EM +GL+
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 532 --------------------------------PSVATYNLLINGWCKSGNIDQAMLCLSR 559
P++ TYN+L++G CK+G + +AM+
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF-E 492
Query: 560 MLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCD 619
L++ + PD+ TY +I+G+C AG+ +D L+ + KG +PN I + +I+G C+
Sbjct: 493 YLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
A + MKE G P+ + LI A L + + + E++KEM
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/582 (27%), Positives = 273/582 (46%), Gaps = 30/582 (5%)
Query: 17 LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEAL 76
L D+VKSR F S L+ + + E L +Q++ G+ + Y+Y+ +
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCF 128
Query: 77 CKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDE 135
C+ + L L +M G+ D TL+ LL YC+S + A+++ +++++ G+ D
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
F+ L+ + +A L+++M + + T+ +++G K+ +D AL L K
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG- 254
M K +D +Y+ II GLCK K ++ AL L++EM GI PD S LI+ + G
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 255 --ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEM 312
+ + L+ ++ E R +N + ++++ V G + +A L MIK
Sbjct: 309 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR---------- 357
Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
++ P+ ++ +IN +LD A +F M C NV Y+ LI G C +
Sbjct: 358 ------SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
R+EE EL REM + G T ++ + +D A + ++M G P +
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 433 TLLIKELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
+L+ LCK+GK AM F +L E PDI Y+ I G+ +V+ ELF +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTME---PDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
+ G P+V+AYN +ISG C+ EA+ L +M G +P+ TYN LI + G+
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
+ + + M + G + L+ + GR D + +
Sbjct: 589 REASAELIKEM--RSCGFAGDASTIGLVTNMLHDGRLDKSFL 628
Score = 155 bits (393), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 170/408 (41%), Gaps = 69/408 (16%)
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
+I+ N L K+D A+ LF +M + ++ +N L+ + N+ E L +M+
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
G +T + C CRR + AL ++ KM G+EP + + L+ C + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPD--------- 498
A + MV+ G+ PD ++ I GL + A+ L + GC PD
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 499 --------------------------VVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
VV YN II GLCK + + +A +LF EM KG+ P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLE------------------------------ 562
V TY+ LI+ C G A LS M+E
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 563 ----KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
K S PD+ TY++LI+G C+ R D+A ++ M K C PN +T+ LI G CK
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
R + FR M ++G+ + + LI F + A V K+M
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 229 bits (584), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 158/532 (29%), Positives = 252/532 (47%), Gaps = 21/532 (3%)
Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
F+ LL A +K + D L E+M I N T+ +LI+ F ++S++ AL L KM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEG 254
K G+ ++ G C K++ A+ L +M G PD + LI +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 255 ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM 314
E LV + + R + ++ L G ID A+NLL M + ADV +
Sbjct: 133 EAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI---- 187
Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
F+ II++L K +D AL+LF+EM G NV Y++LI LC+ R
Sbjct: 188 ------------FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
++ +LL +M E P T N++ + V A L M + +P +
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
LI C H + +A + MV + PD+ Y+ I G KRV+ ELFR++ G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM 554
D V Y +I GL A+ +F +M++ G+ P + TY++L++G C +G +++A+
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 555 LCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
M +K D+ YTT+I+G+C AG+ DD L+ + KG PN +T+ +I+G
Sbjct: 416 EVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 615 LCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
LC + A + MKE G PD + LI A L + + + E+++EM
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 143/533 (26%), Positives = 248/533 (46%), Gaps = 22/533 (4%)
Query: 21 VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
+VKSR S L+ + + + L ++++R G+ N Y+YN L+ C+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRS 59
Query: 81 SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
+ L L +M G+ TL+ LL YC+ + A+++ +++++ G+ D F+
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
L+ + +A L++RM + N T+ V+++G K+ +D A L +KM +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---EL 256
+D +++ II LCK + ++ AL L+ EM+ GI P+ S LI+ G +
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
+ L+ ++ E + +N + N+++ V G +A L MI
Sbjct: 240 SQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI---------------- 282
Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
K ++ P+ +++ +IN +LD A +F M C ++ YN LI G C S R+E
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
+ EL REM G T ++ + L D A + ++M G P + ++L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
LC +GK +A M + DI Y+ I G+ +VD +LF + G
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 462
Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
P+VV YN +ISGLC + + EA L +M G +P TYN LI + G+
Sbjct: 463 PNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 180/379 (47%), Gaps = 34/379 (8%)
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
P+ F+ +++ + K K DL +SL +M ++G N++ YN LI+ C +++ + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
L +M + G++P+ TL+S+ C + + A+ LV +M G+ P T LI L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
H KA EA + MVQ G P++V Y + GL +DLA L + A DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
+N II LCK + V +A +LF EM TKG+ P+V TY+ LI+ C G A LS M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 562 EKE----------------------------------SGSPDVITYTTLIDGLCIAGRPD 587
EK+ S PD+ TY +LI+G C+ R D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 588 DAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
A ++ M K C P+ T+ LI G CK R FR M +G+ D + LI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 648 SAFLSELNPPLAFEVLKEM 666
+ + A +V K+M
Sbjct: 368 QGLFHDGDCDNAQKVFKQM 386
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 195/431 (45%), Gaps = 31/431 (7%)
Query: 48 EANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPL 107
EA L D++ + G C PN +Y ++ LCK +DL L +M+ D +
Sbjct: 133 EAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
+ C D AL++F E+ G V +S L+ +G A +L+ M + I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
N TF LI FVK+ + +A +L D M K D Y+ +I G C + +L+ A Q
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRIL 283
++ M PD + + LI + T L +E+ R + T+ ++++ L
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTLIQGL 370
Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
+G D A + + M+ V P+ ++ I+++ L +GKL+ A
Sbjct: 371 FHDGDCDNAQKVFKQMVSD----------------GVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
L +F M + ++++Y +I+G+C + ++++ ++L + G KP T N+M
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 404 LCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKA--------MEAFRFLTD 454
LC ++ + A L++KM+ G P +NTL+ L KA M + RF+ D
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534
Query: 455 MVQEGFLPDIV 465
G + +++
Sbjct: 535 ASTIGLVANML 545
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 1/212 (0%)
Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
MV+ LP I ++ + + +K+ DL + L + G ++ YNI+I+ C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
++ A L +M+ G PS+ T + L+NG+C I A+ + +M+E PD IT+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM-GYRPDTITFT 119
Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
TLI GL + + +A+ L + M ++GC PN +T+ ++ GLCK A M+
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 635 GMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
++ D+ +F +I + + A + KEM
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/487 (28%), Positives = 237/487 (48%), Gaps = 18/487 (3%)
Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
V+ +++ + + M G D +I G C+ + A ++ ++GSG PD
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
+ +I+ GE+ + + + V+ + N+I+R L +G + QA +L M
Sbjct: 172 VITYNVMISGYCKAGEINNAL-SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
++ + P+ ++ I+I +D + A+ L EM GC +V
Sbjct: 231 LQRD----------------CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
YN L++G+C RL+E+ + L +M SG +P T N + R +C + A L+
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
M +G P V +LI LC+ G A L M Q G P+ + Y+ + G K+
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
+D A+E + + GC PD+V YN +++ LCK +V +A ++ N++ +KG P + TYN
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEK 599
+I+G K+G +A+ L M K+ PD ITY++L+ GL G+ D+AI ++E E
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDL-KPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 600 GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLA 659
G PN +TF +++ GLCK + A+ M +G KP+ + LI E A
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 660 FEVLKEM 666
E+L E+
Sbjct: 574 LELLNEL 580
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 226/478 (47%), Gaps = 22/478 (4%)
Query: 89 LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSK 147
L+ M +G D T L++ +C G+ KA + + G V D +++++ + K
Sbjct: 125 LENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCK 184
Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
GE++ A +++RM ++ + T+ ++ ++ +A+++ D+M + D
Sbjct: 185 AGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
Y ++I C++ + A++L EM+ G TPD + L+ EG L +K + +
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP 301
Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
+ N I+R + S G A LL M++ KG SP+
Sbjct: 302 SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR---------------KG-FSPSVV 345
Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
+F+I+IN L + G L A+ + +M Q GC N YN L+ G C +++ + E L M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
G P T N+M LC+ V A+ ++ ++ +G P + +I L K GK
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
+A + L +M + PD + YS+ +GGL +VD A++ F + G P+ V +N I
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI 525
Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
+ GLCK+++ A D MI +G P+ +Y +LI G G +A+ L+ + K
Sbjct: 526 MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNK 583
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 157/339 (46%), Gaps = 39/339 (11%)
Query: 363 NNLIDGLCNSNRLEESYELLREM-----------------------------------EE 387
NN + + + LEE ++ L M E
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
SG P T N M C+ ++ AL+++ +M V V +NT+L + LC GK +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS--PDVVTYNTIL-RSLCDSGKLKQ 222
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
A L M+Q PD++ Y+ I V A++L ++ GC PDVV YN++++
Sbjct: 223 AMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN 282
Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
G+CK R+ EA N+M + G P+V T+N+++ C +G A L+ ML K S
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFS 341
Query: 568 PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
P V+T+ LI+ LC G AI + +M + GC PN +++ L+ G CK + A+ +
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 628 FRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
M +G PD+ + +++A + A E+L ++
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 2/168 (1%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G VE+A + +Q+ +G C P +YN +++ L K+ L EM+ D T
Sbjct: 428 GKVEDAVEILNQLSSKG-CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
+ L+ G+ D+A+ F+E G V F+ +++ K + D+A + + M
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMI 546
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
+ + NE ++ +LI G + +AL+L +++ G ++ V
Sbjct: 547 NRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 270/578 (46%), Gaps = 21/578 (3%)
Query: 92 MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEV 151
+ + G K T LL + +F K F+ + D ++F+ + AF K G+V
Sbjct: 230 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKV 289
Query: 152 DKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVI 211
++A +L +M++ + N TF +I G R D+A +KM + G Y ++
Sbjct: 290 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 349
Query: 212 IGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDV 269
+ GL + K++ A + EM G P+ + + LI S + G L + +K++ + +
Sbjct: 350 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 409
Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
+ + N++++ NG D A LL+ M+ +G + N SF
Sbjct: 410 SLTSSTYNTLIKGYCKNGQADNAERLLKEML------SIGFNV----------NQGSFTS 453
Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
+I L D AL EM L LI GLC + ++ EL + G
Sbjct: 454 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 513
Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG-HEPWVKHNTLLIKELCKHGKAMEA 448
F T N++ LC + A + +++ +G V +NT LI C K EA
Sbjct: 514 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT-LISGCCGKKKLDEA 572
Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
F FL +MV+ G PD YS I GL ++ +V+ A++ + D +G PDV Y+++I G
Sbjct: 573 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 632
Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
CKA+R E ++ F+EM++K + P+ YN LI +C+SG + A L L ++ + SP
Sbjct: 633 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA-LELREDMKHKGISP 691
Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
+ TYT+LI G+ I R ++A +L+ EM +G PN + ALI G K +
Sbjct: 692 NSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
R M K + P+ + +I + + N A +L EM
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 789
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 154/575 (26%), Positives = 258/575 (44%), Gaps = 52/575 (9%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G VEEA LF +++ G+ PN ++N +++ L D M ++M + G T
Sbjct: 287 GKVEEAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLIT 345
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
+ L++ + + A V E+ G+ V++ L+ +F + G ++KA E+ + M
Sbjct: 346 YSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 405
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
+ L T+ LI G+ K + D A +L +M GF + + +I LC + +
Sbjct: 406 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFD 465
Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
AL+ EM ++P +L+ LI+ G+ + + E+W
Sbjct: 466 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL-ELW------------------ 506
Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
Q + KG + +T + + +++ L + GKLD
Sbjct: 507 -------------FQFLNKGFVV-----------------DTRTSNALLHGLCEAGKLDE 536
Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
A + +E+ GC+ + YN LI G C +L+E++ L EM + G KP ++T + +
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596
Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP 462
L V A+ + G P V +++I CK + E F +M+ + P
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLF 522
+ V Y+ I R+ +ALEL D+ G P+ Y +I G+ RV EA+ LF
Sbjct: 657 NTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLF 716
Query: 523 NEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCI 582
EM +GL P+V Y LI+G+ K G + + CL R + ++ P+ ITYT +I G
Sbjct: 717 EEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE-CLLREMHSKNVHPNKITYTVMIGGYAR 775
Query: 583 AGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
G +A L NEM EKG P+ IT+ I G K
Sbjct: 776 DGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 810
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 221/545 (40%), Gaps = 65/545 (11%)
Query: 5 LSRARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLC 62
L+RA+RI + +++ K P + + LI G + +A + D + +GL
Sbjct: 353 LTRAKRIGDAYFVLKEMTKKG--FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLS 410
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+ ++ +YN L++ CK+ D E LKEM G+ ++ + T ++ + C+ FD AL
Sbjct: 411 LTSS-TYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 469
Query: 123 VFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
E++ + + L+ K G+ KA EL + + ++ +T L+HG
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLC 529
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
+ ++D+A ++ ++ G D Y+ +I G C K+L+ A EM G+ PD
Sbjct: 530 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNY 589
Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
S LI + ++ + + W+D N M
Sbjct: 590 TYSILICGLFNMNKVEEAI-QFWDDCKRNGML---------------------------- 620
Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
P+ ++ ++I+ K + + F EM N +
Sbjct: 621 --------------------PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 660
Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
YN+LI C S RL + EL +M+ G P T S+ + + V A L +MR
Sbjct: 661 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMR 720
Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
++G EP V H T LI K G+ ++ L +M + P+ + Y+ IGG V
Sbjct: 721 MEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVT 780
Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
A L ++ G PD + Y I G K V EA +E Y +I
Sbjct: 781 EASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE----------ENYAAII 830
Query: 542 NGWCK 546
GW K
Sbjct: 831 EGWNK 835
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
LAL++F + G P NI+++ L +A + + F +++ KG+ P V + I
Sbjct: 222 LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAI 280
Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
N +CK G +++A+ S+M E+ +P+V+T+ T+IDGL + GR D+A M +M E+G
Sbjct: 281 NAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFE 661
P IT+ L+ GL + R A + M +KG P++ V+ LI +F+ + A E
Sbjct: 340 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 399
Query: 662 V 662
+
Sbjct: 400 I 400
Score = 86.3 bits (212), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
A D+F + KG+ PS T N+L+ ++ + C + + + SPDV +TT I
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKC--CEAFDVVCKGVSPDVYLFTTAI 280
Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
+ C G+ ++A+ L+++MEE G APN +TF +I GL C R A + M E+GM+
Sbjct: 281 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 340
Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
P + + L+ A+ VLKEM
Sbjct: 341 PTLITYSILVKGLTRAKRIGDAYFVLKEM 369
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 253/539 (46%), Gaps = 51/539 (9%)
Query: 113 NSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEK 171
+S + D A+ +F ++ + F+ LL A +K + D L E+M I N
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 172 TFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM 231
T+ +LI+ F ++S++ AL L KM K G+ ++ G C K++ A+ L +M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 232 KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
G PD T+ +++ L + +
Sbjct: 182 VEMGYRPD---------------------------------TITFTTLIHGLFLHNKASE 208
Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
A L+ M++ +G PN ++ +++N L K G +DLA +L +M
Sbjct: 209 AVALVDRMVQ---------------RG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
NV +Y+ +ID LC +++ L EME G +P T +S+ CLC +
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
A L+ M + P V LI K GK +EA + +M++ PDI YS+ I
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
G R+D A +F + + C P+VV YN +I+G CKA+R+ E +LF EM +GL+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
+ TY LI+G+ ++ + D A + +M+ + P+++TY TL+DGLC G+ + A++
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-DGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
++ ++ P T+ +I G+CK + F + KG+KPD+ ++ +IS F
Sbjct: 492 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 245/523 (46%), Gaps = 28/523 (5%)
Query: 21 VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
+VKSR S L+ + + + L ++++R G+ N Y+YN L+ C+
Sbjct: 76 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGIS-HNLYTYNILINCFCRRS 134
Query: 81 SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFS 139
+ L L +M G+ TL+ LL YC+ + A+++ +++++ G+ D F+
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 140 ILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKS 199
L+ + +A L++RM + N T+ V+++G K+ +D A L +KM +
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 200 GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GEL 256
++ +Y +I LCK + + AL L++EM+ G+ P+ S LI+ C+ E +
Sbjct: 255 KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA 314
Query: 257 TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIF 316
+ L+ ++ E R +N + N+++ V G + +A L MIK
Sbjct: 315 SRLLSDMIE-RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-------------- 359
Query: 317 KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE 376
++ P+ ++ +IN +LD A +F M C NV YN LI+G C + R++
Sbjct: 360 --SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
E EL REM + G T ++ + +D A + ++M G P + L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 437 KELCKHGK---AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
LCK+GK AM F +L E P I Y+ I G+ +V+ +LF +
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKME---PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
G PDV+ YN +ISG C+ EA+ LF +M G +P T
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/501 (27%), Positives = 241/501 (48%), Gaps = 15/501 (2%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P+ + +N LL A+ K DLV ++MQ G ++ YT L+ +C Q AL+
Sbjct: 82 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 141
Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
+ +++ G+ V S LL + + A L+++M + R + TF LIHG
Sbjct: 142 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
++ +A+ L D+M + G + Y V++ GLCK +++A L ++M+ + I +
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
I S +I S L K ED +N T + N +R V S +L+ +
Sbjct: 262 IYSTVIDS---------LCKYRHEDDALNLFTEMENKGVRPNVITYS-----SLISCLCN 307
Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
E +D + + + ++PN +F+ +I+ +K+GKL A L+ EM + ++F
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
Y++LI+G C +RL+E+ + M P T N++ C+ + + + L R+M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMS 427
Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
+G T LI + A MV +G P+I+ Y+ + GL +++
Sbjct: 428 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE 487
Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
A+ +F + P + YNI+I G+CKA +V + DLF + KG+ P V YN +I
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 542 NGWCKSGNIDQAMLCLSRMLE 562
+G+C+ G ++A +M E
Sbjct: 548 SGFCRKGLKEEADALFRKMRE 568
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 200/423 (47%), Gaps = 52/423 (12%)
Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
I+R + + +D A L M+K P+ P+ F+ +++ + K
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRPL----------------PSIFEFNKLLSAIAKMK 99
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
K DL +SL +M ++G N++ YN LI+ C +++ + LL +M + G++P+ TL+
Sbjct: 100 KFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
S+ C + + A+ LV +M G+ P T LI L H KA EA + MVQ
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLA----------------------------------- 483
G P++V Y + GL +DLA
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 279
Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
L LF ++ G P+V+ Y+ +IS LC +R ++A L ++MI + + P+V T+N LI+
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
+ K G + +A M+ K S PD+ TY++LI+G C+ R D+A ++ M K C P
Sbjct: 340 FVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
N +T+ LI G CK R + FR M ++G+ + + LI F + A V
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 664 KEM 666
K+M
Sbjct: 459 KQM 461
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 4/353 (1%)
Query: 301 KGEP-IADVGVEML-MIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
KG P IA +++ M + G S + + I+ L KLD A+ LF M + +
Sbjct: 24 KGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLP 83
Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
++F +N L+ + + + L +M+ G +T N + C CRR + AL L+
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
KM G+EP + + L+ C + +A + MV+ G+ PD + ++ I GL
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
+ A+ L + GC P++V Y ++++GLCK + A +L N+M + +V Y
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
+ +I+ CK + D A+ + M E + P+VITY++LI LC R DA L ++M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
E+ PN +TF ALI K + A + M ++ + PD+F + +LI+ F
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 182/680 (26%), Positives = 282/680 (41%), Gaps = 94/680 (13%)
Query: 68 SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
SYN LL + + + D ++ L EM G+G T ++ + + + V +
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 128 IDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
+ ++ L+ AFS D L ++M + F LI GF K+ RV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
D AL L D+M S +D +Y+V I K +++MA + + E++ +G+ PD + +
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILVSNGSIDQAYNLLQAMIKGE 303
I L V E++E + N T N+++ S G D+AY+LL+
Sbjct: 280 IGVLCKANRLDEAV-EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 304 PIADVGV---------------EMLMIF---KGTVSPNTSSFDIIINTLLKDGKLDLALS 345
I V E L +F K +PN S+++I+I+ L + GKLD A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
L M + G NV N ++D LC S +L+E+ + EM+ P T S+ L
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG------ 459
+ V A + KM T LIK HG+ + + DM+ +
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 460 -----------------------------FLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
F+PD YS I GLI + ELF +
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
GC D AYNI+I G CK +V +A L EM TKG P+V TY +I+G K +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG---------- 600
D+A + K +V+ Y++LIDG GR D+A ++ E+ +KG
Sbjct: 639 DEAYMLFEEAKSKRI-ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 601 -------------------------CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
C PN++T+ LI GLCK + A V ++ M+++G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 636 MKPDMFVFVALISAFLSELN 655
MKP + +IS N
Sbjct: 758 MKPSTISYTTMISGLAKAGN 777
Score = 226 bits (575), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 164/623 (26%), Positives = 294/623 (47%), Gaps = 29/623 (4%)
Query: 37 IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
I G VG V+ A F +++ GL P+ +Y ++ LCK+ +D + ++
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGL-KPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 97 WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
Y ++ Y ++G+FD+A S+ G + + ++ +L K G+VD+A
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
++ E M + N T+ +LI + ++D A +L D M K+G + ++++ L
Sbjct: 364 KVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVNTMT 273
CK+++L+ A ++ EM TPD LI G + V E D D T +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIK--------------------GEPIADVGVEML 313
++ S+++ ++G + + + + MI GEP + G M
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP--EKGRAMF 540
Query: 314 MIFKGT-VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNS 372
K P+ S+ I+I+ L+K G + LF M + GC+ + YN +IDG C
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 373 NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHN 432
++ ++Y+LL EM+ GF+PT T S+ L + + A L + + + E V
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 433 TLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA 492
+ LI K G+ EA+ L +++Q+G P++ +++ + L+ + ++ AL F+ +
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 493 HGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQ 552
C P+ V Y I+I+GLCK ++ +A + EM +G+ PS +Y +I+G K+GNI +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 553 AMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
A R + G PD Y +I+GL R DA L+ E +G + T + L+
Sbjct: 781 AGALFDR-FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 613 TGLCKCDRPRAALVHFRMMKEKG 635
L K D A + +++E G
Sbjct: 840 DTLHKNDCLEQAAIVGAVLRETG 862
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 1/271 (0%)
Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
+ NS+ + R ++ ++ +M V G P V ++ K K E + + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
+ F P Y+ IG + D+ L LF+ + G P V + +I G K RV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
A L +EM + L + YN+ I+ + K G +D A +E PD +TYT+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHE-IEANGLKPDEVTYTS 278
Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
+I LC A R D+A+ ++ +E+ P + +I G + A + KG
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 636 MKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
P + + +++ A +V +EM
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 108/232 (46%), Gaps = 2/232 (0%)
Query: 5 LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
L++ R+ +L ++ R ++ LI G VG ++EA ++ +++ ++GL P
Sbjct: 632 LAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGL-TP 690
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
N Y++N LL+AL K+ ++ + + M++ ++ T L+ C +F+KA +
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
E+ G + ++ ++ +K G + +A L +R + + +I G
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
+R A LF++ + G V++ L KN LE A + + ++ +G
Sbjct: 811 NRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 159/555 (28%), Positives = 260/555 (46%), Gaps = 22/555 (3%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ D A+ +F ++ + V F+ LL A +K + D L E+M I T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
+LI+ F ++S++ AL L KM K G+ ++ G C K++ A+ L +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 235 GITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
G PD + LI + E LV + + R + ++ L G D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ-RGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
A NLL M + ADV + F+ II++L K +D AL+LF+EM
Sbjct: 244 ALNLLNKMEAAKIEADVVI----------------FNTIIDSLCKYRHVDDALNLFKEME 287
Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
G NV Y++LI LC+ R ++ +LL +M E P T N++ + V
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFV 347
Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
A L M + +P + L+ C H + +A + MV + PD+V Y+ I
Sbjct: 348 EAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
G KRV+ ELFR++ G D V Y +I GL A+ +F +M++ G+
Sbjct: 408 KGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 467
Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
P + TY++L++G C +G +++A+ M +K D+ YTT+I+G+C AG+ DD
Sbjct: 468 PDIMTYSILLDGLCNNGKLEKALEVFDYM-QKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
L+ + KG PN +T+ +I+GLC + A + MKE G P+ + LI A L
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 652 SELNPPLAFEVLKEM 666
+ + + E+++EM
Sbjct: 587 RDGDKAASAELIREM 601
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 50/422 (11%)
Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
I+R + + +D A L M+K P+ P+ F+ +++ + K
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRPL----------------PSIVEFNKLLSAIAKMK 99
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
K D+ +SL +M ++ + ++ YN LI+ C +++ + LL +M + G++P+ TL+
Sbjct: 100 KFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLS 159
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
S+ C + + A+ LV +M G+ P T LI L H KA EA + MVQ
Sbjct: 160 SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 219
Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
G P++V Y + GL DLAL L + A DVV +N II LCK + V +A
Sbjct: 220 GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 279
Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE-------------- 564
+LF EM TKG+ P+V TY+ LI+ C G A LS M+EK+
Sbjct: 280 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 339
Query: 565 --------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
S PD+ TY +L++G C+ R D A ++ M K C P+
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD 399
Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
+T+ LI G CK R FR M +G+ D + LI + + A +V K
Sbjct: 400 VVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 459
Query: 665 EM 666
+M
Sbjct: 460 QM 461
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 125/528 (23%), Positives = 227/528 (42%), Gaps = 57/528 (10%)
Query: 67 YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
Y+YN L+ C+ + L L +M G+ TL+ LL YC+ + A+++ ++
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 127 IIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
+++ G+ D F+ L+ + +A L++RM + N T+ V+++G K+
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
D AL L +KM + +D +++ II LCK + ++ AL L+ EM+ GI P+ S
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 246 LITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
LI+ G + + L+ ++ E + +N + N+++ V G +A L MIK
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
++ P+ +++ ++N +LD A +F M C +V Y
Sbjct: 360 ----------------SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
N LI G C S R+E+ EL REM G T ++ + L D A + ++M
Sbjct: 404 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVS 463
Query: 423 QGHEPWVKHNTLL-----------------------------------IKELCKHGKAME 447
G P + ++L I+ +CK GK +
Sbjct: 464 DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDD 523
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIIS 507
+ + +G P++V Y+ I GL + + A L + + G P+ YN +I
Sbjct: 524 GWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Query: 508 GLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
+ A + +L EM + + +T L+ N G +D++ L
Sbjct: 584 AHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN-MLHDGRLDKSFL 630
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 175/353 (49%), Gaps = 4/353 (1%)
Query: 301 KGEP-IADVGVEML-MIFKG-TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ 357
KG P IA +++ M + G S + + I+ L D KLD A+ LF M + +
Sbjct: 24 KGNPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLP 83
Query: 358 NVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV 417
++ +N L+ + + + L +M+ +T N + C CRR + AL L+
Sbjct: 84 SIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALL 143
Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
KM G+EP + + L+ C + +A + MV+ G+ PD + ++ I GL
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
+ A+ L + GC P++V Y ++++GLCK A +L N+M + V +
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
N +I+ CK ++D A L L + +E + P+V+TY++LI LC GR DA L ++M
Sbjct: 264 NTIIDSLCKYRHVDDA-LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
EK PN +TF ALI K + A + M ++ + PD+F + +L++ F
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 194/432 (44%), Gaps = 31/432 (7%)
Query: 47 EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
EA L D++ + G C PN +Y ++ LCK DL L +M+ D
Sbjct: 207 SEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 265
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
++ C D AL++F E+ G V +S L+ +G A +L+ M +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
I N TF LI FVK+ + +A +L+D M K D Y+ ++ G C + +L+ A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRI 282
Q++ M PD + LI + T L +E+ R + T+ ++++
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQG 444
Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
L +G D A + + M+ V P+ ++ I+++ L +GKL+
Sbjct: 445 LFHDGDCDNAQKVFKQMVSD----------------GVPPDIMTYSILLDGLCNNGKLEK 488
Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
AL +F M + ++++Y +I+G+C + ++++ ++L + G KP T N+M
Sbjct: 489 ALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMIS 548
Query: 403 CLCRRQDVVGALNLVRKMRVQGHEPWV-KHNTLLIKELCKHGKA--------MEAFRFLT 453
LC ++ + A L++KM+ G P +NTL+ L KA M + RF+
Sbjct: 549 GLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVG 608
Query: 454 DMVQEGFLPDIV 465
D G + +++
Sbjct: 609 DASTIGLVANML 620
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/599 (27%), Positives = 275/599 (45%), Gaps = 59/599 (9%)
Query: 53 FDQVKREGL--CVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
++++ R G P+ +Y L+ C++ +DL L + G+ D TPLL+
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 111 YCNSGQFDKALS-VFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDD---C 164
C + A+ V + + G + +VFS ILL +A EL+ M D
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCI-PNVFSYNILLKGLCDENRSQEALELLHMMADDRGG 190
Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
+ ++ +I+GF K+ DKA + +M G D Y+ II LCK + ++ A
Sbjct: 191 GSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKA 250
Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
+++ + M +G+ PD + NSI+
Sbjct: 251 MEVLNTMVKNGVMPD---------------------------------CMTYNSILHGYC 277
Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
S+G +A L+ M GVE P+ ++ ++++ L K+G+ A
Sbjct: 278 SSGQPKEAIGFLKKMRSD------GVE----------PDVVTYSLLMDYLCKNGRCMEAR 321
Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
+F MT+ G + Y L+ G L E + LL M +G P H+ + +
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
++ V A+ + KMR QG P +I LCK G+ +A + M+ EG P
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
+ Y++ I GL + + A EL ++ G C + + +N II CK RV E+E LF
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
M+ G+ P+V TYN LING+C +G +D+AM LS M+ P+ +TY+TLI+G C
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSV-GLKPNTVTYSTLINGYCKIS 560
Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
R +DA++L+ EME G +P+ IT+ ++ GL + R AA + + E G + ++ +
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 267/564 (47%), Gaps = 45/564 (7%)
Query: 62 CVPNNYSYNCLLEALC-KSCSVDLVEMRLKEMQDYGWGY--DKYTLTPLLQVYCNSGQFD 118
C+PN +SYN LL+ LC ++ S + +E+ D G G D + T ++ + G D
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 119 KALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
KA S ++E++D G + + V ++ ++ A K +DKA E++ M + + T+ ++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
HG+ + +A+ KM G D Y +++ LCKN + A +++ M G+
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 238 PDFEILSKLITSCSDEGELT-------LLVKE-IWEDRDVNTMTLLCNSIMRILVSNGSI 289
P+ L+ + +G L L+V+ I D V ++ L+C G +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI-LIC-----AYAKQGKV 387
Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
DQA + M + ++PN ++ +I L K G+++ A+ F +
Sbjct: 388 DQAMLVFSKM----------------RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
M G +YN+LI GLC N+ E + EL+ EM + G NS+ C+
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
V+ + L M G +P V LI C GK EA + L+ MV G P+ V YS
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
I G I R++ AL LF+++ + G PD++ YNII+ GL + +R A A++L+ + G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 530 LIPSVATYNLLINGWCKSGNIDQAM-----LCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
++TYN++++G CK+ D A+ LCL + + T+ +ID L G
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDL------KLEARTFNIMIDALLKVG 665
Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
R D+A L+ G PN T+
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTY 689
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 243/561 (43%), Gaps = 96/561 (17%)
Query: 181 VKKSRVDKALQLFDKMTKSG---FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
V + A+ +++M ++G D Y ++IG C+ +L++ + G
Sbjct: 60 VARDSPAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFR 119
Query: 238 PDFEILSKLITS-CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ--AYN 294
D + L+ C+D+ R + M + ++R + G I +YN
Sbjct: 120 VDAIAFTPLLKGLCADK-------------RTSDAMDI----VLRRMTELGCIPNVFSYN 162
Query: 295 LLQAMIKGEPIADVGVEMLMIFK----GTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
+L + E + +E+L + G P+ S+ +IN K+G D A S + EM
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
G + +V YN++I LC + ++++ E+L M ++G P T NS+ C
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS-- 468
A+ ++KMR G EP V +LL+ LCK+G+ MEA + M + G P+I Y
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTL 342
Query: 469 ----AAIGGLIDIK-----------------------------RVDLALELFRDICAHGC 495
A G L+++ +VD A+ +F + G
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAM- 554
P+ V Y +I LCK+ RV +A F +MI +GL P YN LI+G C ++A
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 555 ---------LCLS---------------RMLEKE---------SGSPDVITYTTLIDGLC 581
+CL+ R++E E P+VITY TLI+G C
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 582 IAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMF 641
+AG+ D+A+ L + M G PN +T+ LI G CK R ALV F+ M+ G+ PD+
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDII 582
Query: 642 VFVALISAFLSELNPPLAFEV 662
+ ++ A E+
Sbjct: 583 TYNIILQGLFQTRRTAAAKEL 603
Score = 163 bits (412), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 237/520 (45%), Gaps = 22/520 (4%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P+ +YN +L C S LK+M+ G D T + L+ C +G+ +A
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 123 VFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
+F+ + G E + LL ++ G + + L++ M I + F +LI +
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
K+ +VD+A+ +F KM + G +A Y +IG LCK+ ++E A+ + +M G++P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 242 ILSKLIT---SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
+ + LI +C+ L+ E+ DR + T+ NSI+ G + ++ L +
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEML-DRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
M++ +GV+ PN +++ +IN GK+D A+ L M +G N
Sbjct: 502 MVR------IGVK----------PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPN 545
Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
Y+ LI+G C +R+E++ L +EME SG P T N + + L + + A L
Sbjct: 546 TVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 605
Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
++ G + + +++ LCK+ +A + ++ + ++ I L+ +
Sbjct: 606 RITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVG 665
Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
R D A +LF ++G P+ Y ++ + + E + LF M G N
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
++ + G I +A LS M++++ S + T + ID
Sbjct: 726 FIVRELLQRGEITRAGTYLS-MIDEKHFSLEASTASLFID 764
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 192/443 (43%), Gaps = 57/443 (12%)
Query: 28 MSPGAL--GFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
++P A+ G +I L G VE+A + F+Q+ EGL P N YN L+ LC +
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLS-PGNIVYNSLIHGLCTCNKWERA 460
Query: 86 EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLV 143
E + EM D G + ++ +C G+ ++ +F ++ G V +V ++ L+
Sbjct: 461 EELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG-VKPNVITYNTLIN 519
Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
+ G++D+A +L+ M ++ N T+ LI+G+ K SR++ AL LF +M SG +
Sbjct: 520 GYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSP 579
Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI 263
D Y++I+ GL + ++ A +LY + SG +
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY-------------------- 619
Query: 264 WEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPN 323
N I+ L N D A + Q + + D+ +E
Sbjct: 620 -------------NIILHGLCKNKLTDDALQMFQNLC----LMDLKLE------------ 650
Query: 324 TSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR 383
+F+I+I+ LLK G+ D A LF + G + N + Y + + + LEE +L
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 710
Query: 384 EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHG 443
ME++G LN + R L +R ++ A + M + H L +L G
Sbjct: 711 SMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL-SMIDEKHFSLEASTASLFIDLLSGG 769
Query: 444 KAMEAFRFLTDMVQEGFLPDIVC 466
K E +RFL + + F+ + C
Sbjct: 770 KYQEYYRFLPEKYKS-FIESLSC 791
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
PD+ Y IG R+DL ++ G D +A+ ++ GLC +R ++A D+
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 522 -FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS--PDVITYTTLID 578
M G IP+V +YN+L+ G C +A+ L M + G PDV++YTT+I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
G G D A ++EM ++G P+ +T+ ++I LCK A+ M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
D + +++ + S P A LK+M
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKM 292
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/628 (25%), Positives = 289/628 (46%), Gaps = 45/628 (7%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
P+ +YNCL++A K+ +D + +EM D +TL C G++ +AL++
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 124 FNEIIDHGWVDEHVFSILLVA-FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
+ +V + VF L++ + ++A + + RM + N T+ L+ G +
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
K ++ + ++ + M G +++ ++ C + A +L +M G P + +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVV 409
Query: 243 LSKLITS-CSDEGELTLLVKEIWEDRDVNTMT-------LLCNSIMRILVSNGSIDQAYN 294
+ LI S C D+ L + ++ E + + +S R L S G ++A++
Sbjct: 410 YNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFS 469
Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
+++ MI +G + P+TS++ ++N L K++LA LF EM + G
Sbjct: 470 VIREMIG---------------QGFI-PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGG 513
Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
+ +V+ Y ++D C + +E++ + EM E G P T ++ + + V A
Sbjct: 514 LVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYAN 573
Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI---------- 464
L M +G P + + LI CK G+ +A + M +PD+
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 465 ------VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
V Y A + G RV+ A +L + GC P+ + Y+ +I GLCK ++ EA
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
+++ EM G ++ TY+ LI+ + K D A LS+MLE S +P+V+ YT +ID
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN-SCAPNVVIYTEMID 752
Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
GLC G+ D+A L MEEKGC PN +T+ A+I G + L M KG+ P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 639 DMFVFVALISAFLSELNPPLAFEVLKEM 666
+ + LI +A +L+EM
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 164/642 (25%), Positives = 281/642 (43%), Gaps = 80/642 (12%)
Query: 69 YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
YN L++ + + + E L++++D L L++ +C +G F AL +
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 129 DHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
D + ++ L+ AF K +D A + M N+R++ T + K +
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWR 287
Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
+AL L + F D Y +I GLC+ E A+ + M+ + P+ S L+
Sbjct: 288 EALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTL--------LCNSIMRILVSNGSIDQAYNLLQAM 299
C ++ +L R +N M + + NS++ ++G AY LL+ M
Sbjct: 345 CGCLNKKQLGRC------KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKM 398
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
+K + V ++I G++ + S + + LDLA + EM G + N
Sbjct: 399 VKCGHMPGYVVYNILI--GSICGDKDSLNCDL--------LDLAEKAYSEMLAAGVVLNK 448
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
++ LC++ + E+++ ++REM GF P T + + LC + A L +
Sbjct: 449 INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE 508
Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
M+ G V T+++ CK G +A ++ +M + G P++V Y+A I + K+
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI-------- 531
V A ELF + + GC P++V Y+ +I G CKA +V +A +F M +
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 532 --------PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
P+V TY L++G+CKS +++A L M E P+ I Y LIDGLC
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLCKV 687
Query: 584 GRPDDAIMLWNEMEEKG-----------------------------------CAPNRITF 608
G+ D+A + EM E G CAPN + +
Sbjct: 688 GKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 747
Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+I GLCK + A +MM+EKG +P++ + A+I F
Sbjct: 748 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 163/650 (25%), Positives = 291/650 (44%), Gaps = 91/650 (14%)
Query: 26 CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK-----SC 80
C+ SP L+ + G A L ++ + G +P YN L+ ++C +C
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-MPGYVVYNILIGSICGDKDSLNC 426
Query: 81 SV-DLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
+ DL E EM G +K ++ + C++G+++KA SV E+I G++ D +
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
S +L +++ A L E M + + T+ +++ F K +++A + F++M +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
G + Y +I K K++ A +L+ M G P+ S LI +G
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI-----DGH--- 598
Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
C + G +++A + + M + + DV +
Sbjct: 599 -----------------CKA--------GQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
+ PN ++ +++ K +++ A L M+ GC N +Y+ LIDGLC +L+E+
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 379 YELLREMEESGFKPTHFTLNSM----FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTL 434
E+ EM E GF T +T +S+ F+ +RQD+ A ++ KM P V T
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKV--KRQDL--ASKVLSKMLENSCAPNVVIYTE 749
Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
+I LCK GK EA++ + M ++G P++V Y+A I G I +++ LEL + + G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEM--------------ITKGL---------- 530
P+ V Y ++I CK + A +L EM + +G
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGL 869
Query: 531 ---------IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI-----TYTTL 576
P ++ Y LLI+ K+ ++ A+ R+LE+ + + TY +L
Sbjct: 870 LDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL----RLLEEVATFSATLVDYSSTYNSL 925
Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
I+ LC+A + + A L++EM +KG P +F +LI GL + + AL+
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 234/532 (43%), Gaps = 73/532 (13%)
Query: 46 VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
+E A +LF+++KR GL V + Y+Y ++++ CK+ ++ EM++ G + T T
Sbjct: 499 MELAFLLFEEMKRGGL-VADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYT 557
Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM--- 161
L+ Y + + A +F ++ G + V +S L+ K G+V+KAC++ ERM
Sbjct: 558 ALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGS 617
Query: 162 -------------DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
DD + R N T+ L+ GF K RV++A +L D M+ G + +Y
Sbjct: 618 KDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVY 677
Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
D +I GLCK +L+ A ++ +EM G S LI DR
Sbjct: 678 DALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI------------------DRY 719
Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
D A +L M++ + +PN +
Sbjct: 720 FKV---------------KRQDLASKVLSKMLEN----------------SCAPNVVIYT 748
Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
+I+ L K GK D A L + M + GC NV Y +IDG ++E ELL M
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA-ME 447
G P + T + C+ + A NL+ +M+ Q H W H K + K +E
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK-QTH--WPTHTAGYRKVIEGFNKEFIE 865
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC--PDVVAYNII 505
+ L ++ Q+ P + Y I LI +R+++AL L ++ YN +
Sbjct: 866 SLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSL 925
Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
I LC A +V A LF+EM KG+IP + ++ LI G ++ I +A+L L
Sbjct: 926 IESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/606 (24%), Positives = 238/606 (39%), Gaps = 76/606 (12%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
LI L L EEA M F R C+PN +Y+ LL + + L M
Sbjct: 308 LISGLCEASLFEEA-MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDK-A 154
G L+ YC SG A + +++ G + +V +L+ S G+ D
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG-SICGDKDSLN 425
Query: 155 CELIE-------RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
C+L++ M + LN+ + +KA + +M GF D +
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
Y ++ LC ++E+A L+ EMK G+ D + ++ S G + K E R
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
+V ++ L+ A +K + ++ + PN ++
Sbjct: 546 EVGC--------------TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 328 DIIINTLLKDGKLDLALSLFREM----------------TQIGCMQNVFLYNNLIDGLCN 371
+I+ K G+++ A +F M NV Y L+DG C
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 372 SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH 431
S+R+EE+ +LL M G +P ++
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDA-------------------------------- 679
Query: 432 NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDIC 491
LI LCK GK EA T+M + GF + YS+ I +KR DLA ++ +
Sbjct: 680 ---LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736
Query: 492 AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNID 551
+ C P+VV Y +I GLCK + EA L M KG P+V TY +I+G+ G I+
Sbjct: 737 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Query: 552 QAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMAL 611
+ L RM K +P+ +TY LID C G D A L EM++ + + +
Sbjct: 797 TCLELLERMGSK-GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKV 855
Query: 612 ITGLCK 617
I G K
Sbjct: 856 IEGFNK 861
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 142/358 (39%), Gaps = 49/358 (13%)
Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
QIG +YN L+D + + + E L+++ + + LN + R CR
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFS 217
Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIK---------------------------------- 437
AL + +++ P LI+
Sbjct: 218 IALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFA 277
Query: 438 -ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
LCK GK EA LT + E F+PD V Y+ I GL + + A++ + A C
Sbjct: 278 YSLCKVGKWREA---LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL 334
Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLC 556
P+VV Y+ ++ G +++ + + N M+ +G PS +N L++ +C SG+ A
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 557 LSRMLEKESGSPDVITYTTLIDGLCIAGRPDD--------AIMLWNEMEEKGCAPNRITF 608
L +M+ K P + Y LI +C G D A ++EM G N+I
Sbjct: 395 LKKMV-KCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 609 MALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
+ LC + A R M +G PD + +++ + LAF + +EM
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEM 509
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 218 bits (556), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 265/555 (47%), Gaps = 24/555 (4%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P ++ L A+ K+ DLV K+M+ G ++ YTL+ ++ +C + A S
Sbjct: 85 LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFS 144
Query: 123 VFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
+II G+ + FS L+ G V +A EL++RM + + + T L++G
Sbjct: 145 AMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC 204
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
+ +A+ L DKM + G +A Y ++ +CK+ Q +A++L +M+ I D
Sbjct: 205 LSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 242 ILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
S +I G L L E+ E + + T + N ++ + G D LL+
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
MIK + ++PN +F ++I++ +K+GKL A L +EM G +
Sbjct: 324 MIKRK----------------INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
Y +LIDG C N L+++ +++ M G P T N + C+ + L L R
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 419 KMRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
KM ++G V +NT LI+ C+ GK A +MV P+IV Y + GL D
Sbjct: 428 KMSLRGVVADTVTYNT-LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
+ ALE+F I D+ YNIII G+C A +V +A DLF + KG+ P V TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
N++I G CK G + +A L L R +E++ +PD TY LI G ++ L E++
Sbjct: 547 NIMIGGLCKKGPLSEAEL-LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 598 EKGCAPNRITFMALI 612
G + + T +I
Sbjct: 606 RCGFSVDASTIKMVI 620
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 262/554 (47%), Gaps = 24/554 (4%)
Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
D A+ +F ++I + + FS L A +K + D L ++M+ I N T ++
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
I+ F + ++ A K+ K G+ + + +I GLC ++ AL+L M G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 237 TPDFEILSKLITS---CSDEGELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQA 292
PD ++ L+ E E LL+ ++ E N +T ++ ++ +G A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY--GPVLNVMCKSGQTALA 247
Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
LL+ M + + + + III+ L K G LD A +LF EM
Sbjct: 248 MELLRKM----------------EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
G N+ YN LI G CN+ R ++ +LLR+M + P T + + + +
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
A L ++M +G P T LI CK +A + + MV +G P+I ++ I
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
G R+D LELFR + G D V YN +I G C+ ++ A++LF EM+++ + P
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
++ TY +L++G C +G ++A+ + +EK D+ Y +I G+C A + DDA L
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 530
Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
+ + KG P T+ +I GLCK A + FR M+E G PD + + LI A L
Sbjct: 531 FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLG 590
Query: 653 ELNPPLAFEVLKEM 666
+ + + ++++E+
Sbjct: 591 DGDATKSVKLIEEL 604
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 1/319 (0%)
Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
L D K D A+ LFR+M + V ++ L + + + + L ++ME G
Sbjct: 64 LVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNL 123
Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
+TL+ M C CR + + A + + K+ G+EP + LI LC G+ EA +
Sbjct: 124 YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDR 183
Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
MV+ G PD++ + + GL + A+ L + +GC P+ V Y +++ +CK+ +
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 515 VAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT 574
A A +L +M + + Y+++I+G CK G++D A + M E + + ++ITY
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYN 302
Query: 575 TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEK 634
LI G C AGR DD L +M ++ PN +TF LI K + R A + M +
Sbjct: 303 ILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR 362
Query: 635 GMKPDMFVFVALISAFLSE 653
G+ PD + +LI F E
Sbjct: 363 GIAPDTITYTSLIDGFCKE 381
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 201/439 (45%), Gaps = 26/439 (5%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G EA +L D++ G C PN +Y +L +CKS L L++M++ D
Sbjct: 207 GKEAEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMD 162
+ ++ C G D A ++FNE+ G + ++IL+ F G D +L+ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
I N TF VLI FVK+ ++ +A +L +M G A D Y +I G CK L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCN 277
A Q+ M G P+ + LI C D+G L L K R V T+ N
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDG-LELFRK--MSLRGVVADTVTYN 442
Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
++++ G ++ A L Q M+ + V PN ++ I+++ L +
Sbjct: 443 TLIQGFCELGKLNVAKELFQEMVSRK----------------VPPNIVTYKILLDGLCDN 486
Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
G+ + AL +F ++ + ++ +YN +I G+CN+++++++++L + G KP T
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
N M LC++ + A L RKM GH P +LI+ G A ++ + + ++ +
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606
Query: 458 EGFLPDIVCYSAAIGGLID 476
GF D I L D
Sbjct: 607 CGFSVDASTIKMVIDMLSD 625
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 168/359 (46%), Gaps = 26/359 (7%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G ++ A LF++++ +G+ N +YN L+ C + D L++M + T
Sbjct: 277 GSLDNAFNLFNEMEMKGI-TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMD 162
+ L+ + G+ +A + E+I G D ++ L+ F K +DKA ++++ M
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
N +TF +LI+G+ K +R+D L+LF KM+ G +D Y+ +I G C+ +L
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTL---LCNSI 279
+A +L+ EM + P+ L+ D GE + EI+E + + M L + N I
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL-EIFEKIEKSKMELDIGIYNII 514
Query: 280 MRILVSNGSIDQAYNL-------------------LQAMIKGEPIADVGVEMLMIFKGTV 320
+ + + +D A++L + + K P+++ + + +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Query: 321 SPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
+P+ +++I+I L DG ++ L E+ + G + +ID L + RL++S+
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG-RLKKSF 632
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 265/558 (47%), Gaps = 59/558 (10%)
Query: 115 GQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
G + A V+ EI G ++ + +I++ A K G+++K + ++ + + + T+
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273
Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
LI + K +++A +L + M GF+ Y+ +I GLCK+ + E A ++++EM
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSID 290
SG++PD L+ +G++ + ++++ D RDV + +S+M + +G++D
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDV-VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
+A ++ + I P+ + I+I + G + +A++L EM
Sbjct: 393 KALMYFNSVKEAGLI----------------PDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
Q GC +V YN ++ GLC L E+ +L EM E P +TL
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL------------- 483
Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
T+LI CK G A M ++ D+V Y+
Sbjct: 484 ----------------------TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
+ G + +D A E++ D+ + P ++Y+I+++ LC +AEA +++EMI+K +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
P+V N +I G+C+SGN L +M+ E PD I+Y TLI G A
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAF 640
Query: 591 MLWNEMEEK--GCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
L +MEE+ G P+ T+ +++ G C+ ++ + A V R M E+G+ PD + +I+
Sbjct: 641 GLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Query: 649 AFLSELNPPLAFEVLKEM 666
F+S+ N AF + EM
Sbjct: 701 GFVSQDNLTEAFRIHDEM 718
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 223/513 (43%), Gaps = 52/513 (10%)
Query: 156 ELIERMDDC--NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
E++ +D N N+ F +LI +V+ ++ +A + F + GF + +IG
Sbjct: 149 EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
L + +E+A +Y E+ SG+ +N T
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGV-------------------------------GINVYT 237
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
L N ++ L +G +++ VG + + + V P+ +++ +I+
Sbjct: 238 L--NIMVNALCKDGKMEK----------------VGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
G ++ A L M G V+ YN +I+GLC + E + E+ EM SG P
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
T S+ C++ DVV + MR + P + + ++ + G +A +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
+ + G +PD V Y+ I G + +A+ L ++ GC DVV YN I+ GLCK +
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
+ EA+ LFNEM + L P T +LI+G CK GN+ AM +M EK DV+TY
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI-RLDVVTY 518
Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
TL+DG G D A +W +M K P I++ L+ LC A + M
Sbjct: 519 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMIS 578
Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
K +KP + + ++I + N L++M
Sbjct: 579 KNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/578 (25%), Positives = 261/578 (45%), Gaps = 34/578 (5%)
Query: 20 DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
D S C + LIR + EA+ F ++ +G V + + N L+ +L +
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSID-ACNALIGSLVRI 213
Query: 80 CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVF 138
V+L +E+ G G + YTL ++ C G+ +K + +++ + G + D +
Sbjct: 214 GWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY 273
Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
+ L+ A+S G +++A EL+ M T+ +I+G K + ++A ++F +M +
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL 258
SG + D+ Y ++ CK + +++S+M+ + PD S +++ + G L
Sbjct: 334 SGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD- 392
Query: 259 LVKEIWEDRDVNTMTLLC-NSIMRILVS----NGSIDQAYNLLQAMIKGEPIADVGVEML 313
K + V L+ N I IL+ G I A NL M++ DV V
Sbjct: 393 --KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV-VTYN 449
Query: 314 MIFKG--------------------TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
I G + P++ + I+I+ K G L A+ LF++M +
Sbjct: 450 TILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK 509
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
+V YN L+DG ++ + E+ +M PT + + + LC + + A
Sbjct: 510 RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569
Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
+ +M + +P V +IK C+ G A + FL M+ EGF+PD + Y+ I G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 474 LIDIKRVDLALELFRDICAH--GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
+ + + A L + + G PDV YN I+ G C+ ++ EAE + +MI +G+
Sbjct: 630 FVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
P +TY +ING+ N+ +A ML++ SPD
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR-GFSPD 726
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 194/398 (48%), Gaps = 8/398 (2%)
Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS---PNTSSFDI 329
+L ++++ ILV +G + A + L MI+ ++ +E++ T S N S FD+
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSR--LEIVNSLDSTFSNCGSNDSVFDL 170
Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
+I T ++ KL A F + G ++ N LI L +E ++ + +E+ SG
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
+TLN M LC+ + + +++ +G P + LI G EAF
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
+ M +GF P + Y+ I GL + + A E+F ++ G PD Y ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG-SP 568
CK V E E +F++M ++ ++P + ++ +++ + +SGN+D+A++ + + KE+G P
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV--KEAGLIP 408
Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
D + YT LI G C G A+ L NEM ++GCA + +T+ ++ GLCK A F
Sbjct: 409 DNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
M E+ + PD + LI N A E+ ++M
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 34 GFLIRCLGS----VGLVEEANM--LFDQVKR----EGLCVPNNYSYNCLLEALCKSCSVD 83
GF+ C+ G V E NM F VK+ +G VP+ ++YN +L C+ +
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 84 LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF 138
E+ L++M + G D+ T T ++ + + +A + +E++ G+ + F
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 158/543 (29%), Positives = 257/543 (47%), Gaps = 24/543 (4%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P +N L A+ K+ +LV K+M+ G + YTL+ ++ +C + A S
Sbjct: 85 LPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFS 144
Query: 123 VFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFV 181
+I+ G+ D +F+ LL V +A EL++RM + + T L++G
Sbjct: 145 TMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLC 204
Query: 182 KKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFE 241
+V A+ L D+M ++GF + Y ++ +CK+ Q +A++L +M+ I D
Sbjct: 205 LNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV 264
Query: 242 ILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
S +I +G L L E+ E + + N+++ + G D LL+
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
MIK + +SPN +F ++I++ +K+GKL A L +EM Q G N
Sbjct: 324 MIKRK----------------ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
YN+LIDG C NRLEE+ +++ M G P T N + C+ + L L R
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 419 KMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDI 477
+M ++G V +NT L++ C+ GK A + +MV PDIV Y + GL D
Sbjct: 428 EMSLRGVIANTVTYNT-LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 478 KRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATY 537
++ ALE+F I D+ Y III G+C A +V +A DLF + KG+ Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 538 NLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEME 597
N++I+ C+ ++ +A + +M E E +PD +TY LI A L EM+
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTE-EGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 598 EKG 600
G
Sbjct: 606 SSG 608
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 147/554 (26%), Positives = 266/554 (48%), Gaps = 24/554 (4%)
Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
D A+ +F ++I + + F+ L A +K + + L ++M+ I + T ++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
I+ F + ++ A K+ K G+ D +++ ++ GLC ++ AL+L M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNT----MTLLCNSIMRILVSNGSIDQA 292
P L+ L+ G+++ V + DR V T + ++ ++ +G A
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAV--VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
LL+ M + + + + III+ L KDG LD A +LF EM
Sbjct: 248 MELLRKM----------------EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 291
Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
G ++ YN LI G CN+ R ++ +LLR+M + P T + + + +
Sbjct: 292 KGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLRE 351
Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
A L+++M +G P LI CK + EA + + M+ +G PDI+ ++ I
Sbjct: 352 ADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
G R+D LELFR++ G + V YN ++ G C++ ++ A+ LF EM+++ + P
Sbjct: 412 GYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
+ +Y +L++G C +G +++A+ + +EK D+ Y +I G+C A + DDA L
Sbjct: 472 DIVSYKILLDGLCDNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDL 530
Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
+ + KG + + +I+ LC+ D A + FR M E+G PD + LI A L
Sbjct: 531 FCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLG 590
Query: 653 ELNPPLAFEVLKEM 666
+ + A E+++EM
Sbjct: 591 DDDATTAAELIEEM 604
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 200/437 (45%), Gaps = 26/437 (5%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G V +A +L D++ G PN +Y +L +CKS L L++M++ D
Sbjct: 207 GKVSDAVVLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
+ ++ C G D A ++FNE+ G+ D ++ L+ F G D +L+ M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
I N TF VLI FVK+ ++ +A QL +M + G A + Y+ +I G CK +LE
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCN 277
A+Q+ M G PD + LI C D+G L L + NT+T N
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG-LELFREMSLRGVIANTVTY--N 442
Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
++++ +G ++ A L Q M+ V P+ S+ I+++ L +
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRR----------------VRPDIVSYKILLDGLCDN 486
Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
G+L+ AL +F ++ + ++ +Y +I G+CN+++++++++L + G K
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
N M LCR+ + A L RKM +GH P +LI+ A A + +M
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 458 EGFLPDIVCYSAAIGGL 474
GF D+ I L
Sbjct: 607 SGFPADVSTVKMVINML 623
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 158/316 (50%), Gaps = 3/316 (0%)
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
K D A+ LFR+M Q + V +N L + + + E L ++ME G + +TL+
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
M C CR + + A + + K+ G+EP V NTLL LC + EA + MV+
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLL-NGLCLECRVSEALELVDRMVE 186
Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
G P ++ + + GL +V A+ L + G P+ V Y +++ +CK+ + A
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
A +L +M + + Y+++I+G CK G++D A + M E + D+ITY TLI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLI 305
Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
G C AGR DD L +M ++ +PN +TF LI K + R A + M ++G+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 638 PDMFVFVALISAFLSE 653
P+ + +LI F E
Sbjct: 366 PNTITYNSLIDGFCKE 381
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 90/219 (41%), Gaps = 37/219 (16%)
Query: 52 LFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVY 111
LF ++ G+ + N +YN L++ C+S +++ + +EM D + LL
Sbjct: 425 LFREMSLRGV-IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 112 CNSGQFDKALSVFNEI------------------------IDHGW------------VDE 135
C++G+ +KAL +F +I +D W +D
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 136 HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDK 195
++I++ + + KA L +M + +E T+ +LI + A +L ++
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 196 MTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
M SGF +D + ++I L + + L + S + S
Sbjct: 604 MKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRAS 642
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 164/672 (24%), Positives = 314/672 (46%), Gaps = 62/672 (9%)
Query: 5 LSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVP 64
LS R + + + + + C +I+ G + ++A +F +++ C P
Sbjct: 53 LSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEP 112
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
SYN LL A ++ VE + G + T L+++ C +F+KA
Sbjct: 113 AIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172
Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
+ + G+ + VFS + +I+ K
Sbjct: 173 DWMWKEGFKPD-VFS---------------------------------YSTVINDLAKAG 198
Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM-KGSGITPDFEIL 243
++D AL+LFD+M++ G A D Y+++I G K K + A++L+ + + S + P+ +
Sbjct: 199 KLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH 258
Query: 244 SKLITSCSDEGELTLLVKEIWE-----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
+ +I+ S G + +K IWE +R+ + T +S++ L G++D+A ++
Sbjct: 259 NIMISGLSKCGRVDDCLK-IWERMKQNEREKDLYTY--SSLIHGLCDAGNVDKAESVFNE 315
Query: 299 MIKGEPIADV------------------GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
+ + + DV +E+ I + S N S++I+I LL++GK+
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKI 375
Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
D A ++R M G + Y I GLC + + ++ +++E+E SG + S+
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
CLC+++ + A NLV++M G E LI L + + EA FL +M + G
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC 495
Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAED 520
P +V Y+ I GL + A +++ +G PD+ Y+I++ GLC+ +++ A +
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 521 LFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGL 580
L+++ + GL V +N+LI+G C G +D AM ++ M E + + +++TY TL++G
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM-EHRNCTANLVTYNTLMEGF 614
Query: 581 CIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDM 640
G + A ++W M + G P+ I++ ++ GLC C A+ F + G+ P +
Sbjct: 615 FKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTV 674
Query: 641 FVFVALISAFLS 652
+ + L+ A ++
Sbjct: 675 YTWNILVRAVVN 686
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 158/606 (26%), Positives = 267/606 (44%), Gaps = 52/606 (8%)
Query: 49 ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLL 108
A LFD R + Y+ +L L ++ V+ V ++ ++ D+ ++
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 109 QVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNI 166
+ Y + D+AL VF + + + + ++ LL AF + + K L + +
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
N +T+ VLI KK +KA D M K GF D Y +I L K +L+ AL+
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
L+ EM G+ PD +C + +L+ +++D T L + ++
Sbjct: 206 LFDEMSERGVAPD--------VTCYN-----ILIDGFLKEKDHKTAMELWDRLLE----- 247
Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSL 346
+V PN + +I+I+ L K G++D L +
Sbjct: 248 ------------------------------DSSVYPNVKTHNIMISGLSKCGRVDDCLKI 277
Query: 347 FREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCR 406
+ M Q ++++ Y++LI GLC++ ++++ + E++E T N+M CR
Sbjct: 278 WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
+ +L L R M + V +N +LIK L ++GK EA M +G+ D
Sbjct: 338 CGKIKESLELWRIMEHKNSVNIVSYN-ILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
Y I GL V+ AL + +++ + G DV AY II LCK +R+ EA +L EM
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
G+ + N LI G + + +A L R + K P V++Y LI GLC AG+
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFL-REMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
+A EM E G P+ T+ L+ GLC+ + AL + + G++ D+ + L
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 647 ISAFLS 652
I S
Sbjct: 576 IHGLCS 581
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/586 (24%), Positives = 240/586 (40%), Gaps = 92/586 (15%)
Query: 120 ALSVFNEIIDH-GWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
A ++F+ H G+ V + +L S+ V+ ++E + + +E +I
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAM--YDVIIGGLCKNKQLEMALQLYSEMKGSG 235
+ K S D+AL +F +M + F + A+ Y+ ++ + KQ L++ + +G
Sbjct: 86 KTYGKNSMPDQALDVFKRM-REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
+ P+ + + LI + E ++A
Sbjct: 145 VAPNLQTYNVLIKMSCKKKEF---------------------------------EKARGF 171
Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
L M +K P+ S+ +IN L K GKLD AL LF EM++ G
Sbjct: 172 LDWM----------------WKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
+V YN LIDG + + EL R +E+S P T N M L + V L
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
+ +M+ E + + LI LC G +A ++ + D+V Y+ +GG
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
++ +LEL+R I H ++V+YNI+I GL + ++ EA ++ M KG
Sbjct: 336 CRCGKIKESLELWR-IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWN 594
TY + I+G C +G +++A L + + +E G DV Y ++ID LC R ++A L
Sbjct: 395 TTYGIFIHGLCVNGYVNKA-LGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVK 453
Query: 595 EMEEKG-----------------------------------CAPNRITFMALITGLCKCD 619
EM + G C P +++ LI GLCK
Sbjct: 454 EMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 620 RPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
+ A + M E G KPD+ + L+ + LA E+ +
Sbjct: 514 KFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 219/483 (45%), Gaps = 23/483 (4%)
Query: 189 ALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
A LFD T+ G+A A +Y I+ L + + + ++ ++
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ------------- 72
Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN-LLQAMIKGEPIA 306
C + ++ L V + + + L MR + ++YN LL A ++ +
Sbjct: 73 -ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQW- 130
Query: 307 DVGVEMLMIFKGT--VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
V VE L + T V+PN +++++I K + + A M + G +VF Y+
Sbjct: 131 -VKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYST 189
Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQ 423
+I+ L + +L+++ EL EM E G P N + + +D A+ L R +
Sbjct: 190 VINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 424 GHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLA 483
P VK + ++I L K G+ + + M Q D+ YS+ I GL D VD A
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKA 309
Query: 484 LELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
+F ++ DVV YN ++ G C+ ++ E+ +L+ M K + ++ +YN+LI G
Sbjct: 310 ESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKG 368
Query: 544 WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
++G ID+A + + R++ + + D TY I GLC+ G + A+ + E+E G
Sbjct: 369 LLENGKIDEATM-IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVL 663
+ + ++I LCK R A + M + G++ + V ALI + + A L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 664 KEM 666
+EM
Sbjct: 488 REM 490
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 13/343 (3%)
Query: 313 LMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVFLYNNLIDGLCN 371
+++F ++SP ++ L + A +LF T+ G + +Y++++ L
Sbjct: 1 MVVFPKSLSPKH-----VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSE 55
Query: 372 S---NRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR-VQGHEP 427
+ N + EL+R E K S+ + + AL++ ++MR + G EP
Sbjct: 56 TRMVNHVSRIVELIRSQE---CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEP 112
Query: 428 WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELF 487
++ L+ + + ++ G P++ Y+ I K + A
Sbjct: 113 AIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFL 172
Query: 488 RDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKS 547
+ G PDV +Y+ +I+ L KA ++ +A +LF+EM +G+ P V YN+LI+G+ K
Sbjct: 173 DWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKE 232
Query: 548 GNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRIT 607
+ AM R+LE S P+V T+ +I GL GR DD + +W M++ + T
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYT 292
Query: 608 FMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+ +LI GLC A F + E+ D+ + ++ F
Sbjct: 293 YSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 151/347 (43%), Gaps = 21/347 (6%)
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
N SYN L++ L ++ +D M + M G+ DK T + C +G +KAL V
Sbjct: 358 NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVM 417
Query: 125 NEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKK 183
E+ G +D + ++ ++ K +++A L++ M + LN LI G ++
Sbjct: 418 QEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD 477
Query: 184 SRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEIL 243
SR+ +A +M K+G Y+++I GLCK + A EM +G PD +
Sbjct: 478 SRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTY 537
Query: 244 SKLITSCSDEGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
S L+ + ++ L + E+W + T ++ N ++ L S G +D A ++ M
Sbjct: 538 SILLCGLCRDRKIDLAL-ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
A N +++ ++ K G + A ++ M ++G ++
Sbjct: 597 HRNCTA----------------NLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
YN ++ GLC + + E + G PT +T N + R + R
Sbjct: 641 SYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVNR 687
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 168/615 (27%), Positives = 273/615 (44%), Gaps = 71/615 (11%)
Query: 31 GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
G L+ L GLV+E ++ ++ + +C PN Y+YN ++ CK +V+ +
Sbjct: 184 GCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC-PNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 91 EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGE 150
++ + G D +T T L+ YC D A VFNE+ G
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG------------------- 283
Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
R NE + LIHG R+D+A+ LF KM Y V
Sbjct: 284 ---------------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS----CSDEGELTLLVKEIWED 266
+I LC +++ AL L EM+ +GI P+ + LI S C E LL + + +
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
N +T N+++ G I+ A ++++ M + +SPNT +
Sbjct: 389 LMPNVITY--NALINGYCKRGMIEDAVDVVELMESRK----------------LSPNTRT 430
Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
++ +I K + A+ + +M + + +V YN+LIDG C S + +Y LL M
Sbjct: 431 YNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
+ G P +T SM LC+ + V A +L + +G P V T LI CK GK
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
EA L M+ + LP+ + ++A I GL ++ A L + G P V I+I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
L K A F +M++ G P TY I +C+ G + A +++M +E+G
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM--RENG 667
Query: 567 -SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
SPD+ TY++LI G G+ + A + M + GC P++ TF++LI L
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI----------KHL 717
Query: 626 VHFRMMKEKGMKPDM 640
+ + K+KG +P++
Sbjct: 718 LEMKYGKQKGSEPEL 732
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 256/537 (47%), Gaps = 32/537 (5%)
Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
++ LL + +++G VD+ ++ M + + N T+ +++G+ K V++A Q K+
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCS-----D 252
++G D Y +I G C+ K L+ A ++++EM G + + LI D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 253 EGELTLLVKEIWEDR---DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
E + L VK + +D V T T+L S L + +A NL++ M + G
Sbjct: 306 EA-MDLFVK-MKDDECFPTVRTYTVLIKS----LCGSERKSEALNLVKEM------EETG 353
Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
++ PN ++ ++I++L K + A L +M + G M NV YN LI+G
Sbjct: 354 IK----------PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
C +E++ +++ ME P T N + + C+ +V A+ ++ KM + P V
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462
Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
LI C+ G A+R L+ M G +PD Y++ I L KRV+ A +LF
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
+ G P+VV Y +I G CKA +V EA + +M++K +P+ T+N LI+G C G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
+ +A L +M+ K P V T T LI L G D A + +M G P+ T+
Sbjct: 583 LKEATLLEEKMV-KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
I C+ R A M+E G+ PD+F + +LI + AF+VLK M
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 156/553 (28%), Positives = 262/553 (47%), Gaps = 31/553 (5%)
Query: 107 LLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
LL G D+ V+ E++ D + + ++ ++ + K G V++A + + ++ +
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
+ + T+ LI G+ ++ +D A ++F++M G + Y +I GLC ++++ A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 226 QLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWE---DRDVNTMTLLCNSI 279
L+ +MK P + LI S C E E LVKE+ E +++T T+L +S
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS- 367
Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
L S ++A LL M++ KG + PN +++ +IN K G
Sbjct: 368 ---LCSQCKFEKARELLGQMLE---------------KGLM-PNVITYNALINGYCKRGM 408
Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
++ A+ + M N YN LI G C SN + ++ +L +M E P T NS
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
+ CR + A L+ M +G P T +I LCK + EA + Q+G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
P++V Y+A I G +VD A + + + C P+ + +N +I GLC ++ EA
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLID 578
L +M+ GL P+V+T +LI+ K G+ D A +ML SG+ PD TYTT I
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS--SGTKPDAHTYTTFIQ 645
Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKP 638
C GR DA + +M E G +P+ T+ +LI G + A + M++ G +P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 639 DMFVFVALISAFL 651
F++LI L
Sbjct: 706 SQHTFLSLIKHLL 718
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 161/635 (25%), Positives = 292/635 (45%), Gaps = 54/635 (8%)
Query: 26 CFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALC----KSCS 81
C + A LI L ++EA LF ++K + C P +Y L+++LC KS +
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE-CFPTVRTYTVLIKSLCGSERKSEA 342
Query: 82 VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSI 140
++LV KEM++ G + +T T L+ C+ +F+KA + ++++ G + + ++
Sbjct: 343 LNLV----KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
L+ + K G ++ A +++E M+ + N +T+ LI G+ K S V KA+ + +KM +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERK 457
Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC--SDEGELTL 258
D Y+ +I G C++ + A +L S M G+ PD + +I S S E
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK----------------- 301
+ + E + VN ++ +++ G +D+A+ +L+ M+
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 302 ---GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
G+ +E M+ G + P S+ I+I+ LLKDG D A S F++M G +
Sbjct: 578 CADGKLKEATLLEEKMVKIG-LQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
Y I C RL ++ +++ +M E+G P FT +S+ + A ++++
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 419 KMRVQGHEPWVKHNTLLIK---------------ELCKHGKAME---AFRFLTDMVQEGF 460
+MR G EP LIK ELC ME L MV+
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAH-GCCPDVVAYNIIISGLCKAQRVAEAE 519
P+ Y I G+ ++ + +A ++F + + G P + +N ++S CK ++ EA
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
+ ++MI G +P + + +LI G K G ++ +L+ D + + +IDG
Sbjct: 817 KVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQC-GYYEDELAWKIIIDG 875
Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITG 614
+ G + L+N ME+ GC + T+ LI G
Sbjct: 876 VGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 29/250 (11%)
Query: 28 MSPGALGF--LIRCLGSVGLVEEANMLFDQVKR--EGLCVPNNYSYNCLLE--------- 74
+SP + LI+ G +G + N FD +KR + C P+ +++ L++
Sbjct: 668 VSPDLFTYSSLIKGYGDLG---QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 75 ---------ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFN 125
A+ D V L++M ++ + + L+ C G A VF+
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 126 EIIDHGWVD--EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC-VLIHGFVK 182
+ + + E VF+ LL K + ++A ++++ M C L + C VLI G K
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI-CVGHLPQLESCKVLICGLYK 843
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
K ++ +F + + G+ D + +II G+ K +E +L++ M+ +G +
Sbjct: 844 KGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQT 903
Query: 243 LSKLITSCSD 252
S LI D
Sbjct: 904 YSLLIEGPPD 913
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 172/668 (25%), Positives = 313/668 (46%), Gaps = 49/668 (7%)
Query: 9 RRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYS 68
R++ P +V+ S L+R L++EA +++++ G+ +N +
Sbjct: 198 RKVVPFVPYVNNVLSS-----------LVRS----NLIDEAKEIYNKMVLIGVA-GDNVT 241
Query: 69 YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
L+ A + + + + G D + +Q C + AL + E+
Sbjct: 242 TQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMR 301
Query: 129 DHGWV--DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
V + ++ ++VAF K G +++A +++ M I ++ L++G+ K + +
Sbjct: 302 GKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNEL 361
Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
KAL LF++M + G A D M+ V++ CKN ++E A++ Y MK I P ++ +
Sbjct: 362 GKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTM 421
Query: 247 ITSC--SDEGELTLLVKEIWEDRDVNTMT--LLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
I C ++ E L EI+ D + + +CN I + G +D A + L+ M +
Sbjct: 422 IQGCLKAESPEAAL---EIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ- 477
Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
KG + PN ++ ++ + +DLA S+F EM + G N F Y
Sbjct: 478 --------------KG-IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA----LNLVR 418
+ LIDG + + +++++ +M S F+ N++ LC+ A NL++
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
+ R +N+ +I K G A +M + G P++V +++ I G
Sbjct: 583 EKRYSMS--CTSYNS-IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
R+DLALE+ ++ + D+ AY +I G CK + A LF+E+ GL+P+V+ YN
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
LI+G+ G +D A+ +M+ + S D+ TYTT+IDGL G + A L++E+ +
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMV-NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Query: 599 KGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPL 658
G P+ I M L+ GL K + A MK+K + P++ ++ +I+ E N
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Query: 659 AFEVLKEM 666
AF + EM
Sbjct: 819 AFRLHDEM 826
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 147/609 (24%), Positives = 267/609 (43%), Gaps = 99/609 (16%)
Query: 58 REGLCVP-NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQ 116
R L VP + +Y ++ A K +++ + EM +G T L+ YC +
Sbjct: 301 RGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNE 360
Query: 117 FDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIR-------- 167
KAL +FN + + G D+ +FS+++ F K E++KA E RM I
Sbjct: 361 LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHT 420
Query: 168 -----------------LNEKTFCVLIHGFV---------KKSRVDKALQLFDKMTKSGF 201
N+ + HGF+ K+ +VD A M + G
Sbjct: 421 MIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGI 480
Query: 202 ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEILSKLITSCSDEGELTL 258
+ Y+ ++ C+ K +++A ++SEM G+ P+ + IL DE
Sbjct: 481 EPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWD 540
Query: 259 LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
++ ++ + ++ N+I+ L G +A +LQ +IK +
Sbjct: 541 VINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK---------------EK 584
Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
S + +S++ II+ +K G D A+ +REM++ G NV + +LI+G C SNR++ +
Sbjct: 585 RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLA 644
Query: 379 YELLREMEESGFK---PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
E+ EM+ K P + GAL
Sbjct: 645 LEMTHEMKSMELKLDLPAY-----------------GAL--------------------- 666
Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
I CK A+ +++ + G +P++ Y++ I G ++ ++D A++L++ + G
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
D+ Y +I GL K + A DL++E++ G++P + +L+NG K G +A
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786
Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
L M +K+ +P+V+ Y+T+I G G ++A L +EM EKG + F L++G
Sbjct: 787 MLEEM-KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG- 844
Query: 616 CKCDRPRAA 624
+ ++P AA
Sbjct: 845 -RVEKPPAA 852
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/574 (24%), Positives = 253/574 (44%), Gaps = 61/574 (10%)
Query: 102 YTLTP-----LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKAC 155
+ LTP LL Y + + D A+ F ++D V + + +L + + +D+A
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
E+ +M + + T +L+ +++ + ++A+++F ++ G D ++ + +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
CK L MAL L EM+G KL S E +++V
Sbjct: 285 CKTPDLVMALDLLREMRG-----------KLGVPASQETYTSVIVA-------------- 319
Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
V G++++A ++ M+ G+ M +I + ++N
Sbjct: 320 -------FVKEGNMEEAVRVMDEMV------GFGIPMSVIAATS----------LVNGYC 356
Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
K +L AL LF M + G + +++ +++ C + +E++ E M+ P+
Sbjct: 357 KGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSV 416
Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK---ELCKHGKAMEAFRFL 452
+++M + + + AL + E W+ H + K CK GK A FL
Sbjct: 417 LVHTMIQGCLKAESPEAALEIFN----DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
M Q+G P++V Y+ + +K +DLA +F ++ G P+ Y+I+I G K
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
+ A D+ N+M + YN +ING CK G +A L +++++ S +
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
Y ++IDG G D A+ + EM E G +PN +TF +LI G CK +R AL MK
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
+K D+ + ALI F + + A+ + E+
Sbjct: 653 SMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL 686
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 4/279 (1%)
Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
GF+ T N + R + + A++ M + P+V + ++ L + EA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
MV G D V + + ++ + A+++FR + + G PD + +++ +
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 509 LCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS 567
CK + A DL EM K G+ S TY +I + K GN+++A+ + M+ G
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMV--GFGI 341
Query: 568 P-DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
P VI T+L++G C A+ L+N MEE+G AP+++ F ++ CK A+
Sbjct: 342 PMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIE 401
Query: 627 HFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
+ MK + P + +I L +P A E+ +
Sbjct: 402 FYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 131/294 (44%), Gaps = 3/294 (1%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
+I L VG +A + + +E + SYN +++ K D +EM +
Sbjct: 560 IINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSEN 619
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKA 154
G + T T L+ +C S + D AL + +E+ +D + L+ F K ++ A
Sbjct: 620 GKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA 679
Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
L + + + N + LI GF ++D A+ L+ KM G + D Y +I G
Sbjct: 680 YTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDG 739
Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
L K+ + +A LYSE+ GI PD + L+ S +G+ K + E +DV
Sbjct: 740 LLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPN 799
Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
LL ++++ G++++A+ L M++ + D V L++ P +S
Sbjct: 800 VLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAAS 853
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 260/584 (44%), Gaps = 83/584 (14%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ D A+ +F +++ V F+ LL A +K + + L E+M I + T+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
+ I+ F ++S++ AL + KM K G+ D ++ G C +K++ A+ L +M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 235 GITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN 294
G PD T +++ L + +A
Sbjct: 183 GYKPD---------------------------------TFTFTTLIHGLFLHNKASEAVA 209
Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
L+ M++ +G P+ ++ ++N L K G +DLAL+L +M
Sbjct: 210 LVDQMVQ---------------RG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR 253
Query: 355 CMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGAL 414
NV ++N +ID LC +E + +L EME G +P T NS+ CLC A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 415 NLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGL 474
L+ M + P V LI K GK +EA + +M+Q PD + Y+ I G
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 475 IDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV 534
R+D A ++F+ + + C P++ YN +I+G CK +RV + +LF EM +GL+ +
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNT 433
Query: 535 ATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDA----- 589
TY +I G+ ++G+ D A + +M+ + D++TY+ L+ GLC G+ D A
Sbjct: 434 VTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPT-DIMTYSILLHGLCSYGKLDTALVIFK 492
Query: 590 ----------IMLWNEMEEKGCA-----------------PNRITFMALITGLCKCDRPR 622
I ++N M E C P+ +T+ +I+GLC +
Sbjct: 493 YLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 623 AALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
A FR MKE G P+ + LI A L + + + E++KEM
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/537 (28%), Positives = 250/537 (46%), Gaps = 28/537 (5%)
Query: 46 VEEANMLF-DQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTL 104
V++A LF D VK P+ +N LL A+ K +LV ++MQ G +D YT
Sbjct: 64 VDDAVDLFGDMVKSRPF--PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 105 TPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDD 163
+ + +C Q AL+V +++ G+ + V S LL + + A L+++M +
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 164 CNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEM 223
+ + TF LIHG ++ +A+ L D+M + G D Y ++ GLCK +++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 224 ALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI--WEDRDVNTMTLLCNSIMR 281
AL L ++M+ + I + I + +I S + + V E + + + NS++
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
L + G A LL M++ + ++PN +F+ +I+ K+GKL
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKK----------------INPNVVTFNALIDAFFKEGKLV 345
Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
A L EM Q + YN LI+G C NRL+E+ ++ + M P T N++
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
C+ + V + L R+M +G T +I+ + G A MV
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
DI+ YS + GL ++D AL +F+ + ++ YN +I G+CKA +V EA DL
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGS-PDVITYTTLI 577
F + K P V TYN +I+G C + +A +M KE G+ P+ TY TLI
Sbjct: 526 FCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKM--KEDGTLPNSGTYNTLI 577
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/574 (24%), Positives = 263/574 (45%), Gaps = 59/574 (10%)
Query: 20 DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
D+VKSR F S L+ + + E L +Q++ G+ + Y+Y+ + C+
Sbjct: 73 DMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS-HDLYTYSIFINCFCRR 131
Query: 80 CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVF 138
+ L L +M G+ D TL+ LL YC+S + A+++ +++++ G+ D F
Sbjct: 132 SQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTF 191
Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
+ L+ + +A L+++M + + T+ +++G K+ +D AL L +KM
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 199 SGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---E 255
+ ++ +++ II LCK + +E+A+ L++EM+ GI P+ + LI + G +
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 256 LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI 315
+ L+ + E + +N + N+++ G + +A L + MI+
Sbjct: 312 ASRLLSNMLEKK-INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR------------- 357
Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
++ P+T +++++IN +LD A +F+ M C+ N+ YN LI+G C R+
Sbjct: 358 ---SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW-VKHNTL 434
E+ EL REM + G T ++ + + D A +V K V P + ++
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA-QMVFKQMVSNRVPTDIMTYSI 473
Query: 435 LIKELCKHGK--------------AMEAFRFLTDMVQEGFL------------------P 462
L+ LC +GK ME F+ + + EG P
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKP 533
Query: 463 DIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII-SGLCKAQRVAEAEDL 521
D+V Y+ I GL + + A +LFR + G P+ YN +I + L R A AE L
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAE-L 592
Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
EM + G + +T +L+ N G +D++ L
Sbjct: 593 IKEMRSSGFVGDASTISLVTN-MLHDGRLDKSFL 625
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 169/408 (41%), Gaps = 69/408 (16%)
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
+I+ N L K+D A+ LF +M + ++ +N L+ + N+ E L +M+
Sbjct: 52 EILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQT 111
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
G +T + C CRR + AL ++ KM G+EP + + L+ C + +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAY----- 502
A + MV+ G+ PD ++ I GL + A+ L + GC PD+V Y
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 503 ------------------------------NIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
N II LCK + V A DLF EM TKG+ P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKE---------------------------- 564
+V TYN LIN C G A LS MLEK+
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 565 ------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
S PD ITY LI+G C+ R D+A ++ M K C PN T+ LI G CKC
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
R + FR M ++G+ + + +I F + A V K+M
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 180/706 (25%), Positives = 317/706 (44%), Gaps = 97/706 (13%)
Query: 37 IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
IR LG G + EA + ++ EG C P+ +Y L++ALC + +D + ++M+
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 97 WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKAC 155
D+ T LL + ++ D ++E+ G V + V F+IL+ A K G +A
Sbjct: 324 HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
+ ++ M D I N T+ LI G ++ R+D AL+LF M G A Y V I
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM--T 273
K+ AL+ + +MK GI P+ + + S + G + + +D+ + +
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 503
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKG--EP--------------------------- 304
+ N +M+ G ID+A LL M++ EP
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 305 ----------------IADVG-----VEMLMIFKGTVS----PNTSSFDIIINTLLKDGK 339
+A +G E + +F+G V PNT +F+ + + L K+ +
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL-- 397
+ LAL + +M +GC+ +VF YN +I GL + +++E+ +M++ + P TL
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCT 682
Query: 398 -------------------NSMFRCLCRR-----QDVVGAL-------NLVR-KMRVQGH 425
N ++ C + +D++G++ N V R+ +
Sbjct: 683 LLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVAN 742
Query: 426 EPWVKHNTLL---IKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKRVD 481
+++L I+ CKH A ++ G P + Y+ IGGL++ ++
Sbjct: 743 GICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 802
Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
+A ++F + + GC PDV YN ++ K+ ++ E +L+ EM T + T+N++I
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 542 NGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGC 601
+G K+GN+D A+ ++ SP TY LIDGL +GR +A L+ M + GC
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 602 APNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
PN + LI G K AA F+ M ++G++PD+ + L+
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 173/637 (27%), Positives = 283/637 (44%), Gaps = 36/637 (5%)
Query: 40 LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
L G EA +F +K GL VP++ +YN +++ K +D L EM + G
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGL-VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELI 158
D + L+ + + D+A +F + + V ++ LL K G++ +A EL
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
E M N TF L K V AL++ KM G D Y+ II GL KN
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 219 KQLEMALQLYSEMKGSGITPDF--------------------EILSKLITSCSDEGELTL 258
Q++ A+ + +MK + PDF +I++ + +C+D+
Sbjct: 657 GQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 259 ---LVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGE-PIADVGVEMLM 314
L+ I + ++ S LV+NG ++L +I+ +V +
Sbjct: 716 WEDLIGSILAEAGIDNAV----SFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTL 771
Query: 315 IFKGT----VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
K T V P +++++I LL+ +++A +F ++ GC+ +V YN L+D
Sbjct: 772 FEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK-MRVQGHEPWV 429
S +++E +EL +EM + T N + L + +V AL+L M + P
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
LI L K G+ EA + M+ G P+ Y+ I G D A LF+
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
+ G PD+ Y++++ LC RV E F E+ GL P V YNL+ING KS
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 550 IDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFM 609
+++A++ + M +PD+ TY +LI L IAG ++A ++NE++ G PN TF
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 610 ALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
ALI G +P A ++ M G P+ + L
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 167/669 (24%), Positives = 308/669 (46%), Gaps = 34/669 (5%)
Query: 28 MSPGALGFL--IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
+ P A ++ I G G A F+++K +G+ PN + N L +L K+
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI-APNIVACNASLYSLAKAGRDREA 487
Query: 86 EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVA 144
+ ++D G D T +++ Y G+ D+A+ + +E++++G D V + L+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
K VD+A ++ RM + ++ T+ L+ G K ++ +A++LF+ M + G +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT------- 257
++ + LCKN ++ +AL++ +M G PD + +I G++
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGS----------IDQAYNLLQAMIKGEPIAD 307
+ K ++ D V TLL + L+ + DQ NL + G +A+
Sbjct: 668 QMKKLVYPDF-VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 308 VGVEMLMIF------KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ-IGCMQNVF 360
G++ + F G S II K + A +LF + T+ +G +
Sbjct: 727 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKM 420
YN LI GL ++ +E + ++ +++ +G P T N + + + L ++M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 421 RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-GFLPDIVCYSAAIGGLIDIKR 479
E + ++I L K G +A D++ + F P Y I GL R
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
+ A +LF + +GC P+ YNI+I+G KA A LF M+ +G+ P + TY++
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 540 LINGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEME- 597
L++ C G +D+ + + KESG +PDV+ Y +I+GL + R ++A++L+NEM+
Sbjct: 967 LVDCLCMVGRVDEGLHYFKEL--KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 598 EKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPP 657
+G P+ T+ +LI L A + ++ G++P++F F ALI + P
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 658 LAFEVLKEM 666
A+ V + M
Sbjct: 1085 HAYAVYQTM 1093
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 159/623 (25%), Positives = 276/623 (44%), Gaps = 67/623 (10%)
Query: 35 FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
+++ L G +EE +FD +++ + N +Y + ++L + L++M++
Sbjct: 123 YMLEALRVDGKLEEMAYVFDLMQKRIIKRDTN-TYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 95 YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDK 153
+G+ + Y+ L+ + S +A+ V+ +I G+ +S L+V K ++D
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
L++ M+ ++ N TF + I + ++++A ++ +M G D Y V+I
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED------- 266
LC ++L+ A +++ +MK PD L+ SD +L VK+ W +
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHV 360
Query: 267 RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSS 326
DV T T+L ++ L G+ +A++ L M D G + PN +
Sbjct: 361 PDVVTFTILVDA----LCKAGNFGEAFDTLDVM------RDQG----------ILPNLHT 400
Query: 327 FDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREME 386
++ +I LL+ +LD AL LF M E
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNM-----------------------------------E 425
Query: 387 ESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
G KPT +T + D V AL KM+ +G P + + L K G+
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
EA + + G +PD V Y+ + + +D A++L ++ +GC PDV+ N +I
Sbjct: 486 EAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLI 545
Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
+ L KA RV EA +F M L P+V TYN L+ G K+G I +A+ M++K
Sbjct: 546 NTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GC 604
Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
P+ IT+ TL D LC A+ + +M + GC P+ T+ +I GL K + + A+
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 627 HFRMMKEKGMKPDMFVFVALISA 649
F MK K + PD L+
Sbjct: 665 FFHQMK-KLVYPDFVTLCTLLPG 686
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 141/550 (25%), Positives = 234/550 (42%), Gaps = 61/550 (11%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
L+ LG G ++EA LF+ + ++G C PN ++N L + LCK+ V L L +M D
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK-------- 147
G D +T ++ +GQ +A+ F+++ + D LL K
Sbjct: 638 GCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAY 697
Query: 148 ------------------WGE----------VDKACELIERMDDCNI-RLNEKTFCVLIH 178
W + +D A ER+ I R + +I
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 179 GFVKKSRVDKALQLFDKMTKS-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
K + V A LF+K TK G Y+++IGGL + +E+A ++ ++K +G
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 238 PDFEILSKLITSCSDEG---ELTLLVKEIWEDR-DVNTMTLLCNSIMRILVSNGSIDQAY 293
PD + L+ + G EL L KE+ + NT+T N ++ LV G++D A
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITH--NIVISGLVKAGNVDDAL 875
Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
+L ++ SP ++ +I+ L K G+L A LF M
Sbjct: 876 DLYYDLMSDRDF---------------SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDY 920
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
GC N +YN LI+G + + + L + M + G +P T + + CLC V
Sbjct: 921 GCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG 980
Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM-VQEGFLPDIVCYSAAIG 472
L+ ++++ G P V L+I L K + EA +M G PD+ Y++ I
Sbjct: 981 LHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLIL 1040
Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
L V+ A +++ +I G P+V +N +I G + + A ++ M+T G P
Sbjct: 1041 NLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Query: 533 SVATYNLLIN 542
+ TY L N
Sbjct: 1101 NTGTYEQLPN 1110
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 169/360 (46%), Gaps = 40/360 (11%)
Query: 311 EMLMIF----KGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
EM +F K + +T+++ I +L G L A R+M + G + N + YN LI
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195
Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
L S E+ E+ R M GF+P+ T +S+ L +R+D+ + L+++M G +
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
P V T+ I+ L + GK EA+ L KR+D
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEIL-------------------------KRMD----- 285
Query: 487 FRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCK 546
GC PDVV Y ++I LC A+++ A+++F +M T P TY L++ +
Sbjct: 286 -----DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 547 SGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRI 606
+ ++D S M EK+ PDV+T+T L+D LC AG +A + M ++G PN
Sbjct: 341 NRDLDSVKQFWSEM-EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 607 TFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
T+ LI GL + R AL F M+ G+KP + ++ I + + A E ++M
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 213 bits (541), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 258/561 (45%), Gaps = 53/561 (9%)
Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSI--LLVAFSKWGEVDKACELIERMDDCN 165
++ Y G+ +A++VF E +D + VFS ++ G D+A ++ RM D
Sbjct: 83 MKNYGRKGKVQEAVNVF-ERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
I + +F + + F K SR AL+L + M+ G + Y ++GG +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
+L+ +M SG++ +KL +R+L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKL---------------------------------LRVLCK 228
Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
G + + LL +IK +G V PN ++++ I L + G+LD A+
Sbjct: 229 KGDVKECEKLLDKVIK---------------RG-VLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
+ + + G +V YNNLI GLC +++ +E+ L +M G +P +T N++ C
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 406 RRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIV 465
+ V A +V G P LI LC G+ A + + +G P+++
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
Y+ I GL + + A +L ++ G P+V +NI+++GLCK V++A+ L M
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
I+KG P + T+N+LI+G+ ++ A+ L ML+ PDV TY +L++GLC +
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSK 511
Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
+D + + M EKGCAPN TF L+ LC+ + AL MK K + PD F
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 646 LISAFLSELNPPLAFEVLKEM 666
LI F + A+ + ++M
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKM 592
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/610 (26%), Positives = 271/610 (44%), Gaps = 26/610 (4%)
Query: 37 IRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG 96
++ G G V+EA +F+++ C P +SYN ++ L S D M+D G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRG 141
Query: 97 WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKAC 155
D Y+ T ++ +C + + AL + N + G ++ + ++ F + +
Sbjct: 142 ITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGY 201
Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
EL +M + L TF L+ KK V + +L DK+ K G + Y++ I GL
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVN 270
C+ +L+ A+++ + G PD + LI S E E+ L K + E + +
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEV-YLGKMVNEGLEPD 320
Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
+ T N+++ G + A + + D +F G V P+ ++ +
Sbjct: 321 SYTY--NTLIAGYCKGGMVQLAERI---------VGDA------VFNGFV-PDQFTYRSL 362
Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
I+ L +G+ + AL+LF E G NV LYN LI GL N + E+ +L EM E G
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
P T N + LC+ V A LV+ M +G+ P + +LI K A
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
L M+ G PD+ Y++ + GL + + +E ++ + GC P++ +NI++ LC
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDV 570
+ +++ EA L EM K + P T+ LI+G+CK+G++D A +M E S
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 571 ITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRM 630
TY +I A L+ EM ++ P+ T+ ++ G CK
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Query: 631 MKEKGMKPDM 640
M E G P +
Sbjct: 663 MMENGFIPSL 672
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/620 (24%), Positives = 266/620 (42%), Gaps = 63/620 (10%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYG------- 96
G ++A+ ++ +++ G+ P+ YS+ +++ CK+ L M G
Sbjct: 125 GYFDQAHKVYMRMRDRGI-TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 97 ---------------WGYDKY-------------TLTPLLQVYCNSGQFDKALSVFNEII 128
GY+ + T LL+V C G + + +++I
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 129 DHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVD 187
G + +++ + + GE+D A ++ + + + + T+ LI+G K S+
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
+A KM G D+ Y+ +I G CK +++A ++ + +G PD LI
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 248 TSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
EGE + E + + +L N++++ L + G I +A L M +
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE---- 419
Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
KG + P +F+I++N L K G + A L + M G ++F +N L
Sbjct: 420 -----------KGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
I G ++E + E+L M ++G P +T NS+ LC+ + + M +G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
P + +L++ LC++ K EA L +M + PD V + I G +D A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 486 LFRDIC-AHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGW 544
LFR + A+ YNIII + V AE LF EM+ + L P TY L+++G+
Sbjct: 588 LFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGF 647
Query: 545 CKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
CK+GN++ L M+E P + T +I+ LC+ R +A + + M +KG P
Sbjct: 648 CKTGNVNLGYKFLLEMMEN-GFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Query: 605 RITFMALITGLCKCDRPRAA 624
+ +C D+ A
Sbjct: 707 A------VNTICDVDKKEVA 720
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 149/574 (25%), Positives = 251/574 (43%), Gaps = 36/574 (6%)
Query: 1 MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
M S +R A LR+L ++ C M+ A ++ E LF ++ G
Sbjct: 153 MKSFCKTSRPHAALRLL-NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 61 --LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
LC+ ++N LL LCK V E L ++ G + +T +Q C G+ D
Sbjct: 212 VSLCLS---TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 119 KALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLI 177
A+ + +I+ G D ++ L+ K + +A + +M + + + T+ LI
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 178 HGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGIT 237
G+ K V A ++ +GF D Y +I GLC + AL L++E G GI
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 238 PDFEILSKLITSCSDEG---ELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQ 291
P+ + + LI S++G E L E+ E +V T +L N + ++ G +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM----GCVSD 444
Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
A L++ MI KG P+ +F+I+I+ K++ AL + M
Sbjct: 445 ADGLVKVMIS---------------KGYF-PDIFTFNILIHGYSTQLKMENALEILDVML 488
Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
G +V+ YN+L++GLC +++ E+ E + M E G P FT N + LCR + +
Sbjct: 489 DNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLD 548
Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL--PDIVCYSA 469
AL L+ +M+ + P LI CK+G A+ M +E + Y+
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM-EEAYKVSSSTPTYNI 607
Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
I + V +A +LF+++ PD Y +++ G CK V EM+ G
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENG 667
Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
IPS+ T +IN C + +A + RM++K
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 46/315 (14%)
Query: 377 ESYELLREM-EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKH---- 431
++ E+ M +E GFK T S +R + + G + ++ V E H
Sbjct: 22 KALEMFNSMRKEVGFKHTL----STYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEG 77
Query: 432 -NTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
+K + GK EA M P + Y+A + L+D D A +++ +
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 491 CAHGCCPDVVAYNIIISGLCKAQRV----------------------------------- 515
G PDV ++ I + CK R
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
AE +LF +M+ G+ ++T+N L+ CK G++ + L +++ K P++ TY
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI-KRGVLPNLFTYNL 256
Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
I GLC G D A+ + + E+G P+ IT+ LI GLCK + + A V+ M +G
Sbjct: 257 FIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEG 316
Query: 636 MKPDMFVFVALISAF 650
++PD + + LI+ +
Sbjct: 317 LEPDSYTYNTLIAGY 331
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 257/542 (47%), Gaps = 24/542 (4%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
P ++ L + ++ DLV K+M+ G ++ YTL+ ++ C + A S
Sbjct: 70 PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSA 129
Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
+II G+ + V FS L+ G V +A EL++RM + + T L++G
Sbjct: 130 MGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCL 189
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
+V A+ L D+M ++GF + Y ++ +CK+ Q +A++L +M+ I D
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 243 LSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
S +I +G L L E+ E + ++ +++R G D LL+ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
IK + ++P+ +F +I+ +K+GKL A L +EM Q G +
Sbjct: 309 IKRK----------------ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
Y +LIDG C N+L+++ +L M G P T N + C+ + L L RK
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 420 MRVQG-HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
M ++G V +NT LI+ C+ GK A +MV PDIV Y + GL D
Sbjct: 413 MSLRGVVADTVTYNT-LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
+ ALE+F I D+ YNIII G+C A +V +A DLF + KG+ P V TYN
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 539 LLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
++I G CK G++ +A L L R +E++ SP+ TY LI G + L E++
Sbjct: 532 IMIGGLCKKGSLSEADL-LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 599 KG 600
G
Sbjct: 591 CG 592
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 178/411 (43%), Gaps = 50/411 (12%)
Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
D A +L Q M + P P F + + + + + DL L L ++
Sbjct: 54 DDAVDLFQEMTRSRP----------------RPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQD 409
M G N++ + +I+ C +L ++ + ++ + G++P T +++ LC
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 410 VVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSA 469
V AL LV +M GH+P + L+ LC +GK +A + MV+ GF P+ V Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 470 AIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
+ + + LA+EL R + D V Y+III GLCK + A +LFNEM KG
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 530 LIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------------------- 564
+ Y LI G+C +G D L M++++
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 565 ---------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
SPD +TYT+LIDG C + D A + + M KGC PN TF LI G
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
CK + L FR M +G+ D + LI F +A E+ +EM
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 215/483 (44%), Gaps = 21/483 (4%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
P+ +++ L+ LC V + M + G TL L+ C +G+ A+ +
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 124 FNEIIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
+ +++ G+ +E + +L K G+ A EL+ +M++ I+L+ + ++I G K
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
+D A LF++M GF +D +Y +I G C + + +L +M ITPD
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 243 LSKLITSCSDEGEL---TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
S LI EG+L L KE+ + R ++ T+ S++ +D+A ++L
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLD-- 376
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
LM+ KG PN +F+I+IN K +D L LFR+M+ G + +
Sbjct: 377 -------------LMVSKG-CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
YN LI G C +LE + EL +EM +P + + LC + AL + K
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 420 MRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKR 479
+ E + ++I +C K +A+ + +G PD+ Y+ IGGL
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 480 VDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNL 539
+ A LFR + G P+ YNI+I ++ L E+ G +T +
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 540 LIN 542
+++
Sbjct: 603 VVD 605
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 157/317 (49%), Gaps = 1/317 (0%)
Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
D K D A+ LF+EMT+ + ++ L + + + + +L ++ME G +T
Sbjct: 50 DIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
L+ M C CR + + A + + K+ G+EP + LI LC G+ EA + MV
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
+ G P ++ +A + GL +V A+ L + G P+ V Y ++ +CK+ + A
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
A +L +M + + Y+++I+G CK G++D A + M E + D+I YTTL
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTL 288
Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
I G C AGR DD L +M ++ P+ + F ALI K + R A + M ++G+
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 637 KPDMFVFVALISAFLSE 653
PD + +LI F E
Sbjct: 349 SPDTVTYTSLIDGFCKE 365
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 198/426 (46%), Gaps = 26/426 (6%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G V +A +L D++ G PN +Y +L+ +CKS L L++M++ D
Sbjct: 191 GKVSDAVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
+ ++ C G D A ++FNE+ G+ D +++ L+ F G D +L+ M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
I + F LI FVK+ ++ +A +L +M + G + D Y +I G CK QL+
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 223 MALQLYSEMKGSGITPDFEILSKLITS-CS----DEGELTLLVKEIWEDRDVNTMTLLCN 277
A + M G P+ + LI C D+G L L K R V T+ N
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG-LELFRK--MSLRGVVADTVTYN 426
Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKD 337
++++ G ++ A L Q M+ V P+ S+ I+++ L +
Sbjct: 427 TLIQGFCELGKLEVAKELFQEMVSRR----------------VRPDIVSYKILLDGLCDN 470
Query: 338 GKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTL 397
G+ + AL +F ++ + ++ +YN +I G+CN+++++++++L + G KP T
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 398 NSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQ 457
N M LC++ + A L RKM GH P +LI+ G A ++ + + ++ +
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Query: 458 EGFLPD 463
GF D
Sbjct: 591 CGFSVD 596
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 94/228 (41%), Gaps = 37/228 (16%)
Query: 21 VVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC 80
+V C + LI L+++ LF ++ G+ V + +YN L++ C+
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV-VADTVTYNTLIQGFCELG 436
Query: 81 SVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI------------- 127
+++ + +EM D + LL C++G+ +KAL +F +I
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 128 -----------IDHGW------------VDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
+D W D ++I++ K G + +A L +M++
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
N T+ +LI + + K+ +L +++ + GF+ DA+ +++
Sbjct: 557 GHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 146/550 (26%), Positives = 262/550 (47%), Gaps = 51/550 (9%)
Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
D A+++F E+I + V FS A ++ + + + ++++ I N T ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
I+ F + + A + K+ K G+ D ++ +I GL ++ A+ L M +G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
PD + NSI+ + +G A +LL
Sbjct: 190 QPD---------------------------------VVTYNSIVNGICRSGDTSLALDLL 216
Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
+ M + ADV ++ II++L +DG +D A+SLF+EM G
Sbjct: 217 RKMEERNVKADV----------------FTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
+V YN+L+ GLC + + + LL++M P T N + + + A L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
++M +G P + L+ C + EA L MV+ PDIV +++ I G
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
+KRVD +++FR+I G + V Y+I++ G C++ ++ AE+LF EM++ G++P V T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
Y +L++G C +G +++A+ L+K ++ YTT+I+G+C G+ +DA L+ +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFED-LQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNP 656
KG PN +T+ +I+GLCK A + R M+E G P+ + LI A L + +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 657 PLAFEVLKEM 666
+ ++++EM
Sbjct: 560 TASAKLIEEM 569
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 260/557 (46%), Gaps = 56/557 (10%)
Query: 47 EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
++A LF ++ R +P+ ++ A+ ++ +LV K+++ G ++ YTL
Sbjct: 70 DDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNI 128
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNI 166
++ +C + A SV +++ G+ E D
Sbjct: 129 MINCFCRCCKTCFAYSVLGKVMKLGY-----------------EPDTT------------ 159
Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQ 226
TF LI G + +V +A+ L D+M ++G D Y+ I+ G+C++ +AL
Sbjct: 160 -----TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 227 LYSEMKGSGITPDFEILSKLITSCSDEGELTL---LVKEIWEDRDVNTMTLLCNSIMRIL 283
L +M+ + D S +I S +G + L KE+ E + + + + NS++R L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVTYNSLVRGL 273
Query: 284 VSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLA 343
G + LL+ M+ E + PN +F+++++ +K+GKL A
Sbjct: 274 CKAGKWNDGALLLKDMVSRE----------------IVPNVITFNVLLDVFVKEGKLQEA 317
Query: 344 LSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRC 403
L++EM G N+ YN L+DG C NRL E+ +L M + P T S+ +
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 404 LCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPD 463
C + V + + R + +G ++L++ C+ GK A +MV G LPD
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
++ Y + GL D +++ ALE+F D+ +V Y II G+CK +V +A +LF
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFC 497
Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
+ KG+ P+V TY ++I+G CK G++ +A + L +M E++ +P+ TY TLI
Sbjct: 498 SLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM-EEDGNAPNDCTYNTLIRAHLRD 556
Query: 584 GRPDDAIMLWNEMEEKG 600
G + L EM+ G
Sbjct: 557 GDLTASAKLIEEMKSCG 573
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 166/364 (45%), Gaps = 34/364 (9%)
Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
D K D A++LF+EM + + ++ ++ + + + + +++E +G +T
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
LN M C CR A +++ K+ G+EP LIK L GK EA + MV
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
+ G PD+V Y++ + G+ LAL+L R + DV Y+ II LC+ +
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------ 564
A LF EM TKG+ SV TYN L+ G CK+G + L L M+ +E
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 565 ----------------------SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCA 602
SP++ITY TL+DG C+ R +A + + M C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEV 662
P+ +TF +LI G C R + FR + ++G+ + + L+ F LA E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 663 LKEM 666
+EM
Sbjct: 426 FQEM 429
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/546 (21%), Positives = 243/546 (44%), Gaps = 29/546 (5%)
Query: 17 LAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFD---QVKREGLCVPNNYSYNCLL 73
L Q++++SR P + F R ++ ++ N++ D Q++ G+ N Y+ N ++
Sbjct: 75 LFQEMIRSRPL--PSLVDF-SRFFSAIARTKQFNLVLDFCKQLELNGI-AHNIYTLNIMI 130
Query: 74 EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-W 132
C+ C L ++ G+ D T L++ G+ +A+ + + ++++G
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
D ++ ++ + G+ A +L+ +M++ N++ + T+ +I + +D A+ L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
F +M G S Y+ ++ GLCK + L +M I P+ + L+
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 253 EGELTLLVKEIWED---RDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVG 309
EG+L E++++ R ++ + N++M + +A N+L M++ +
Sbjct: 311 EGKLQE-ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK------ 363
Query: 310 VEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGL 369
SP+ +F +I ++D + +FR +++ G + N Y+ L+ G
Sbjct: 364 ----------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 370 CNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWV 429
C S +++ + EL +EM G P T + LC + AL + ++ + +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 430 KHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRD 489
T +I+ +CK GK +A+ + +G P+++ Y+ I GL + A L R
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 490 ICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGN 549
+ G P+ YN +I + + + L EM + G ++ ++I+ SG
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID-MLLSGE 592
Query: 550 IDQAML 555
+D++ L
Sbjct: 593 LDKSFL 598
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 465 VCYSAAI-GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
VC+ + G++DIK+ D A+ LF+++ P +V ++ S + + ++ D
Sbjct: 54 VCFRERLRSGIVDIKKDD-AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
++ G+ ++ T N++IN +C+ A L +++ K PD T+ TLI GL +
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM-KLGYEPDTTTFNTLIKGLFLE 171
Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
G+ +A++L + M E GC P+ +T+ +++ G+C+ AL R M+E+ +K D+F +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTY 231
Query: 644 VALISAFLSELNPPLAFEVLKEM 666
+I + + A + KEM
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEM 254
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 150/567 (26%), Positives = 274/567 (48%), Gaps = 34/567 (5%)
Query: 103 TLTPLLQVYCNSGQFDKALSVFNEI-IDHGWVDEHVFSILLVAFSKWGEVDKACELIERM 161
TL+ +++ Y NSG FD + + I +++ + E F ++ A+ K DKA +L RM
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 162 -DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG----FASDAAMYDVIIGGLC 216
D+ + + K+F +++ + + + L+ +D + S + + ++++I LC
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMT 273
K + ++ A++++ M PD L+ C +E E LL+ E+ + +
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCSPSP 257
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
++ N ++ L G + + L+ M KG V PN +++ +I+
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMF---------------LKGCV-PNEVTYNTLIHG 301
Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
L GKLD A+SL M C+ N Y LI+GL R ++ LL MEE G+
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
+ + L + A++L RKM +G +P + ++L+ LC+ GK EA L
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILN 421
Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
M+ G LP+ YS+ + G + A+++++++ GC + Y+++I GLC
Sbjct: 422 RMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG 481
Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML--EKESGSPDVI 571
RV EA ++++M+T G+ P Y+ +I G C G++D A+ ML E+ PDV+
Sbjct: 482 RVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVV 541
Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK----CDRPRAALVH 627
TY L+DGLC+ A+ L N M ++GC P+ IT + L + CD+ R+ L
Sbjct: 542 TYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE 601
Query: 628 F--RMMKEKGMKPDMFVFVALISAFLS 652
R++K + + + ++ +L+
Sbjct: 602 LVVRLLKRQRVSGACTIVEVMLGKYLA 628
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 186/350 (53%), Gaps = 5/350 (1%)
Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
+SPN SF+++I L K +D A+ +FR M + C+ + + Y L+DGLC R++E+
Sbjct: 182 NISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIK 437
LL EM+ G P+ N + LC++ D+ LV M ++G P V +NT LI
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT-LIH 300
Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
LC GK +A L MV +P+ V Y I GL+ +R A+ L + G
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCL 557
+ Y+++ISGL K + EA L+ +M KG P++ Y++L++G C+ G ++A L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 558 SRMLEKESGS-PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLC 616
+RM+ SG P+ TY++L+ G G ++A+ +W EM++ GC+ N+ + LI GLC
Sbjct: 421 NRMI--ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 617 KCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
R + A++ + M G+KPD + ++I + A ++ EM
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 236/520 (45%), Gaps = 31/520 (5%)
Query: 135 EHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD 194
+ S ++ +++ G+ D +L+ R+ N + E++F V+ + K DKA+ LF
Sbjct: 77 DSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFH 136
Query: 195 KMT-----KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITS 249
+M K S ++ +VII ++ LE D+ + S + +
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY--------------DYVVNSNMNMN 182
Query: 250 CSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPI 305
S G L++K + + R V+ + R + + Y L+ + K E I
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAI----EVFRGMPERKCLPDGYTYCTLMDGLCKEERI 238
Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
+ + + + SP+ ++++I+ L K G L L M GC+ N YN L
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
I GLC +L+++ LL M S P T ++ L +++ A+ L+ M +G+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
++LI L K GKA EA M ++G P+IV YS + GL + + A E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
+ + A GC P+ Y+ ++ G K EA ++ EM G + Y++LI+G C
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM---EEKGCA 602
G + +AM+ S+ML PD + Y+++I GLC G D A+ L++EM EE
Sbjct: 479 GVGRVKEAMMVWSKMLTI-GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537
Query: 603 PNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFV 642
P+ +T+ L+ GLC A+ M ++G PD+
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 135/551 (24%), Positives = 226/551 (41%), Gaps = 106/551 (19%)
Query: 28 MSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLV 85
+SP L F +I+ L + V+ A +F + E C+P+ Y+Y L++ LCK +D
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEA 241
Query: 86 EMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVA 144
+ L EMQ G L+ C G + + + + G V +E ++ L+
Sbjct: 242 VLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
G++DKA L+ERM N+ T+ LI+G VK+ R A++L M + G+ +
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIW 264
+Y V+I GL K + E A+ L+ +M G P+ + S L+
Sbjct: 362 QHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG--------------- 406
Query: 265 EDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
L G ++A +L MI + PN
Sbjct: 407 ------------------LCREGKPNEAKEILNRMIASGCL----------------PNA 432
Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
++ ++ K G + A+ +++EM + GC +N F Y+ LIDGLC R++E+ + +
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK 492
Query: 385 MEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGK 444
M G KP +S+ + LC + AL L +M Q EP +
Sbjct: 493 MLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ-EEPKSQ-------------- 537
Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
PD+V Y+ + GL K + A++L + GC PDV+ N
Sbjct: 538 -----------------PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNT 580
Query: 505 IISGLC---------------------KAQRVAEAEDLFNEMITKGLIPSVATYNLLING 543
++ L K QRV+ A + M+ K L P +T+ +++
Sbjct: 581 FLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVRE 640
Query: 544 WCKSGNIDQAM 554
CK I+ A+
Sbjct: 641 ICKPKKINAAI 651
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 212 bits (539), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 190/354 (53%), Gaps = 5/354 (1%)
Query: 315 IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
+ + VSPN +++I+I G +D+AL+LF +M GC+ NV YN LIDG C +
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
+++ ++LLR M G +P + N + LCR + ++ +M +G+ V +NT
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
L IK CK G +A +M++ G P ++ Y++ I + ++ A+E +
Sbjct: 316 L-IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 374
Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
G CP+ Y ++ G + + EA + EM G PSV TYN LING C +G ++ A
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 554 MLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALI 612
+ L M KE G SPDV++Y+T++ G C + D+A+ + EM EKG P+ IT+ +LI
Sbjct: 435 IAVLEDM--KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 613 TGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
G C+ R + A + M G+ PD F + ALI+A+ E + A ++ EM
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 258/566 (45%), Gaps = 36/566 (6%)
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDE--HVFSILLVAFSKWGEVDKACELIERMDDC 164
+++ Y DKALS+ + HG++ ++L + A + + M +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
+ N T+ +LI GF +D AL LFDKM G + Y+ +I G CK ++++
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNSIMR 281
+L M G+ P+ + +I EG E++ ++ E+ R + + N++++
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGYSLDEVTYNTLIK 318
Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
G N QA++ + EML + ++P+ ++ +I+++ K G ++
Sbjct: 319 GYCKEG------NFHQALV-------MHAEML---RHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMF 401
A+ +M G N Y L+DG + E+Y +LREM ++GF P+ T N++
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 402 RCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFL 461
C + A+ ++ M+ +G P V + ++ C+ EA R +MV++G
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK 482
Query: 462 PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDL 521
PD + YS+ I G + +R A +L+ ++ G PD Y +I+ C + +A L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 522 FNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYT------- 574
NEM+ KG++P V TY++LING K +A L ++ +ES DV +T
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 575 -------TLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVH 627
+LI G C+ G +A ++ M K P+ + +I G C+ R A
Sbjct: 603 IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 628 FRMMKEKGMKPDMFVFVALISAFLSE 653
++ M + G +AL+ A E
Sbjct: 663 YKEMVKSGFLLHTVTVIALVKALHKE 688
Score = 195 bits (496), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 220/456 (48%), Gaps = 22/456 (4%)
Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQ-LEMALQLYSEM 231
F +++ + + S +DKAL + GF Y+ ++ ++K+ + A ++ EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 232 KGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI 289
S ++P+ + LI G ++ L + + E + + N+++ I
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 290 DQAYNLLQAM-IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
D + LL++M +KG + PN S++++IN L ++G++ +
Sbjct: 257 DDGFKLLRSMALKG-----------------LEPNLISYNVVINGLCREGRMKEVSFVLT 299
Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
EM + G + YN LI G C ++ + EM G P+ T S+ +C+
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359
Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
++ A+ + +MRV+G P + T L+ + G EA+R L +M GF P +V Y+
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419
Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
A I G +++ A+ + D+ G PDVV+Y+ ++SG C++ V EA + EM+ K
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
G+ P TY+ LI G+C+ +A ML + PD TYT LI+ C+ G +
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
A+ L NEM EKG P+ +T+ LI GL K R R A
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 182/346 (52%), Gaps = 2/346 (0%)
Query: 322 PNTSSFDIIINTLLKDGK-LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYE 380
P S++ +++ ++ + + A ++F+EM + NVF YN LI G C + ++ +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 381 LLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELC 440
L +ME G P T N++ C+ + + L+R M ++G EP + ++I LC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 441 KHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVV 500
+ G+ E LT+M + G+ D V Y+ I G AL + ++ HG P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 501 AYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
Y +I +CKA + A + ++M +GL P+ TY L++G+ + G +++A L R
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL-RE 405
Query: 561 LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDR 620
+ SP V+TY LI+G C+ G+ +DAI + +M+EKG +P+ +++ +++G C+
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYD 465
Query: 621 PRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
AL R M EKG+KPD + +LI F + A ++ +EM
Sbjct: 466 VDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/597 (23%), Positives = 249/597 (41%), Gaps = 91/597 (15%)
Query: 21 VVKSRCFMSPGALGF------LIRCLGSVGLVEEA--NMLFDQVKREGLCVPNNYSYNCL 72
+ ++ FM PG L + IR ++ E ML QV PN ++YN L
Sbjct: 159 LAQAHGFM-PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVS------PNVFTYNIL 211
Query: 73 LEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW 132
+ C + ++D+ +M+ G + T L+ YC
Sbjct: 212 IRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC-------------------- 251
Query: 133 VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQL 192
K ++D +L+ M + N ++ V+I+G ++ R+ + +
Sbjct: 252 --------------KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 193 FDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSD 252
+M + G++ D Y+ +I G CK AL +++EM G+TP + LI S
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 253 EGELTLLVKEIWEDR------DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIA 306
G + ++ + + R + T T L + + G +++AY +L+ M
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ----KGYMNEAYRVLREM------N 407
Query: 307 DVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLI 366
D G SP+ +++ +IN GK++ A+++ +M + G +V Y+ ++
Sbjct: 408 DNG----------FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 367 DGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE 426
G C S ++E+ + REM E G KP T +S+ + C ++ A +L +M G
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 427 PWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALEL 486
P T LI C G +A + +MV++G LPD+V YS I GL R A L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 487 FRDICAHGCCPDVVAYNI---------------IISGLCKAQRVAEAEDLFNEMITKGLI 531
+ P V Y+ +I G C + EA+ +F M+ K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
P YN++I+G C++G+I +A M+ K +T L+ L G+ ++
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMV-KSGFLLHTVTVIALVKALHKEGKVNE 693
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG-NIDQA 553
C +++++ + + +A + + G +P V +YN +++ +S NI A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
MLE + SP+V TY LI G C AG D A+ L+++ME KGC PN +T+ LI
Sbjct: 190 ENVFKEMLESQV-SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
G CK + R M KG++P++ + +I+ E VL EM
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 177/677 (26%), Positives = 281/677 (41%), Gaps = 91/677 (13%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
+IR L + + A + ++ G C N YN L++ LCK V K++
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATG-CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK 291
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
D T L+ C +F+ L + +E++ + E S L+ K G++++A
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
L++R+ D + N + LI K + +A LFD+M K G + Y ++I
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTM 272
C+ +L+ AL EM +G+ + LI G+++ + E ++ +
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
+ S+M S G I++A L M G+ IA P+ +F +++
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMT-GKGIA---------------PSIYTFTTLLS 515
Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
L + G + A+ LF EM + N YN +I+G C + +++E L+EM E G P
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
++ + LC A V + E T L+ C+ GK EA
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI---------------------- 490
+MVQ G D+VCY I G + K L L +++
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 491 -------------CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM------------ 525
GC P+ V Y +I+GLCKA V EAE L ++M
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 526 -----------------------ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE 562
I KGL+ + ATYN+LI G+C+ G I++A ++RM+
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI- 814
Query: 563 KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPR 622
+ SPD ITYTT+I+ LC AI LWN M EKG P+R+ + LI G C
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 623 AALVHFRMMKEKGMKPD 639
A M +G+ P+
Sbjct: 875 KATELRNEMLRQGLIPN 891
Score = 206 bits (523), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 137/496 (27%), Positives = 238/496 (47%), Gaps = 15/496 (3%)
Query: 171 KTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSE 230
+T L+HG VK A++LF+ M G D +Y +I LC+ K L A ++ +
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 231 MKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID 290
M+ +G + + LI + +++WE + L + +V+ ++
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKK-------QKVWEAVGIKK-DLAGKDLKPDVVTYCTLV 304
Query: 291 QAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREM 350
+Q G + D EML + SP+ ++ ++ L K GK++ AL+L + +
Sbjct: 305 YGLCKVQEFEIGLEMMD---EMLCL---RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 351 TQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDV 410
G N+F+YN LID LC + E+ L M + G +P T + + CRR +
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 411 VGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
AL+ + +M G + V LI CK G A F+ +M+ + P +V Y++
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
+GG +++ AL L+ ++ G P + + ++SGL +A + +A LFNEM +
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
P+ TYN++I G+C+ G++ +A L M EK PD +Y LI GLC+ G+ +A
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+ + + + C N I + L+ G C+ + AL + M ++G+ D+ + LI
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 651 LSELNPPLAFEVLKEM 666
L + L F +LKEM
Sbjct: 658 LKHKDRKLFFGLLKEM 673
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/554 (25%), Positives = 247/554 (44%), Gaps = 57/554 (10%)
Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
TL+ LL F A+ +FN+++ G D ++++ ++ + + ++ +A E+I M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
+ +N + VLI G KK +V +A+ + + D Y ++ GLCK ++
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLCNS 278
E+ L++ EM +P +S L+ G E LVK + D V+ + N+
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV-DFGVSPNLFVYNA 372
Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
++ L +A L M K +G+ PN ++ I+I+ + G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGK------IGLR----------PNDVTYSILIDMFCRRG 416
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
KLD ALS EM G +V+ YN+LI+G C + + + EM +PT T
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
S+ C + + AL L +M +G P + T L+ L + G +A + +M +
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
P+ V Y+ I G + + A E +++ G PD +Y +I GLC + +EA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 519 EDLFNEMITKGLIP-SVATYNLLINGWCKSGNIDQAMLCLSRMLEKE------------S 565
+ +F + + KG + Y L++G+C+ G +++A+ M+++
Sbjct: 597 K-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655
Query: 566 GS----------------------PDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAP 603
GS PD + YT++ID G +A +W+ M +GC P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715
Query: 604 NRITFMALITGLCK 617
N +T+ A+I GLCK
Sbjct: 716 NEVTYTAVINGLCK 729
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 193/408 (47%), Gaps = 37/408 (9%)
Query: 295 LLQAMIKGEPIAD-VGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
L+Q ++ + D V V +MI K ++ P + +++ L+K LA+ LF +M +
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
G +V++Y +I LC L + E++ ME +G N + LC++Q V A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281
Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
+ + + + + +P V L+ LCK + + +M+ F P S+ + G
Sbjct: 282 VGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG 341
Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN---------- 523
L +++ AL L + + G P++ YN +I LCK ++ EAE LF+
Sbjct: 342 LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPN 401
Query: 524 -------------------------EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
EM+ GL SV YN LING CK G+I A ++
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA 461
Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
M+ K+ P V+TYT+L+ G C G+ + A+ L++EM KG AP+ TF L++GL +
Sbjct: 462 EMINKKL-EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
R A+ F M E +KP+ + +I + E + AFE LKEM
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 162 bits (411), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 142/582 (24%), Positives = 248/582 (42%), Gaps = 92/582 (15%)
Query: 29 SPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMR 88
S A+ L+ L G +EEA L +V G+ PN + YN L+++LCK E+
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS-PNLFVYNALIDSLCKGRKFHEAELL 389
Query: 89 LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSK 147
M G + T + L+ ++C G+ D ALS E++D G + + ++ L+ K
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
+G++ A + M + + T+ L+ G+ K +++KAL+L+ +MT G A
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
+ ++ GL + + A++L++EM + P+ + +I +EG+++ + + E
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE-- 567
Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYN---LLQAMIKGEPIADVGVEMLMIFKGTVSPNT 324
+ G + Y+ L+ + ++ V + + KG N
Sbjct: 568 ---------------MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Query: 325 SSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLRE 384
+ +++ ++GKL+ ALS+ +EM Q G ++ Y LIDG + + LL+E
Sbjct: 613 ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKE 672
Query: 385 MEESGFK-----------------------------------PTHFTLNSMFRCLCRRQD 409
M + G K P T ++ LC+
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGF 732
Query: 410 VVGALNLVRKMR----------------------------VQGHEPWVK---HNT----L 434
V A L KM+ V+ H +K NT +
Sbjct: 733 VNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNM 792
Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
LI+ C+ G+ EA +T M+ +G PD + Y+ I L V A+EL+ + G
Sbjct: 793 LIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 495 CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
PD VAYN +I G C A + +A +L NEM+ +GLIP+ T
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 202 bits (513), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 177/689 (25%), Positives = 293/689 (42%), Gaps = 82/689 (11%)
Query: 35 FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEM-- 92
FL+ C G+V++A +F + G+ +P + Y +L +L S VDL+ ++
Sbjct: 151 FLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLCR 209
Query: 93 ---QDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSK-- 147
+ G + L L +C G+ KAL H V E F + +V+ +K
Sbjct: 210 GGIEPSGVSAHGFVLDAL---FCK-GEVTKALDF------HRLVMERGFRVGIVSCNKVL 259
Query: 148 ----WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
+++ A L+ + DC N TFC LI+GF K+ +D+A LF M + G
Sbjct: 260 KGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEP 319
Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTL--LVK 261
D Y +I G K L M +L+S+ G+ D + S I G+L +V
Sbjct: 320 DLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVY 379
Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL-QAMIKGEPIADVGVEMLM------ 314
+ + ++ + +++ L +G I +A+ + Q + +G + V L+
Sbjct: 380 KRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKC 439
Query: 315 ------------IFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
+ K P+ + ++++ L K G + A+ +M NV ++
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVF 499
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
N+LIDG C NR +E+ ++ R M G KP T ++ R + AL L +M
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
G EP LI CKH K + M + DI + I L R++
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619
Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
A + F ++ PD+V YN +I G C +R+ EAE +F + P+ T +LI+
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679
Query: 543 GWCKSGNIDQAMLCLSRMLEKESG----------------------------------SP 568
CK+ ++D A+ S M EK S SP
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
+++Y+ +IDGLC GR D+A ++++ + P+ + + LI G CK R A + +
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLY 799
Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPP 657
M G+KPD L+ LSE NPP
Sbjct: 800 EHMLRNGVKPD-----DLLQRALSEYNPP 823
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 138/553 (24%), Positives = 235/553 (42%), Gaps = 63/553 (11%)
Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS-------------ILLVAFSKWG 149
+ + V +G FD A VF+E+I + D +V L+ ++G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160
Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
VDKA E+ + + + + +++ + RVD FDK+ + G
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGG--------- 211
Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDV 269
++ SG++ +L L C E L + +R
Sbjct: 212 ---------------------IEPSGVSAHGFVLDALF--CKGEVTKALDFHRLVMERGF 248
Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
+ CN +++ L S I+ A LL ++ P +PN +F
Sbjct: 249 RVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGP----------------APNVVTFCT 291
Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESG 389
+IN K G++D A LF+ M Q G ++ Y+ LIDG + L ++L + G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
K +S + D+ A + ++M QG P V T+LIK LC+ G+ EAF
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
+++ G P IV YS+ I G + L+ D+ G PDVV Y +++ GL
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGL 471
Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
K + A +M+ + + +V +N LI+GWC+ D+A L + R++ PD
Sbjct: 472 SKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA-LKVFRLMGIYGIKPD 530
Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
V T+TT++ + GR ++A+ L+ M + G P+ + + LI CK +P L F
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 630 MMKEKGMKPDMFV 642
+M+ + D+ V
Sbjct: 591 LMQRNKISADIAV 603
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 187/380 (49%), Gaps = 21/380 (5%)
Query: 278 SIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI---IINTL 334
+I +L+ NG D A + MI G + ++ G++ + D+ ++
Sbjct: 104 TIAHVLIRNGMFDVADKVFDEMITNR-----GKDFNVL--GSIRDRSLDADVCKFLMECC 156
Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLE---ESYELL--REMEESG 389
+ G +D AL +F TQ+G + +++ L S+R++ + ++ L +E SG
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 390 FKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAF 449
F L+++F C+ +V AL+ R + +G + ++K L + A
Sbjct: 217 VSAHGFVLDALF---CK-GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVAS 271
Query: 450 RFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGL 509
R L+ ++ G P++V + I G +D A +LF+ + G PD++AY+ +I G
Sbjct: 272 RLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY 331
Query: 510 CKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPD 569
KA + LF++ + KG+ V ++ I+ + KSG++ A + RML + SP+
Sbjct: 332 FKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML-CQGISPN 390
Query: 570 VITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFR 629
V+TYT LI GLC GR +A ++ ++ ++G P+ +T+ +LI G CKC R+ +
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 630 MMKEKGMKPDMFVFVALISA 649
M + G PD+ ++ L+
Sbjct: 451 DMIKMGYPPDVVIYGVLVDG 470
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 246/527 (46%), Gaps = 52/527 (9%)
Query: 90 KEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKW 148
++ G+ + + C SG + ++L + ++ G+ + + + L+ F
Sbjct: 78 RQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTL 137
Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMY 208
+ KA ++E ++ + + + LI+GF K +R+D A ++ D+M F+ D Y
Sbjct: 138 RNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTY 196
Query: 209 DVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD 268
+++IG LC +L++AL+ +L++L+ SD + T++
Sbjct: 197 NIMIGSLCSRGKLDLALK---------------VLNQLL---SDNCQPTVI--------- 229
Query: 269 VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
T T+L + M G +D+A L+ M+ +G + P+ +++
Sbjct: 230 --TYTILIEATML----EGGVDEALKLMDEMLS---------------RG-LKPDMFTYN 267
Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
II + K+G +D A + R + GC +V YN L+ L N + EE +L+ +M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
P T + + LCR + A+NL++ M+ +G P LI C+ G+ A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
FL M+ +G LPDIV Y+ + L + D ALE+F + GC P+ +YN + S
Sbjct: 388 IEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSA 447
Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
L + A + EM++ G+ P TYN +I+ C+ G +D+A L M E P
Sbjct: 448 LWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF-HP 506
Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
V+TY ++ G C A R +DAI + M GC PN T+ LI G+
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 209/474 (44%), Gaps = 51/474 (10%)
Query: 176 LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSG 235
LI GF + KA+++ + + K G D Y+ +I G CK +++ A ++ M+
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 236 ITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
+PD T+ N ++ L S G +D A +
Sbjct: 189 FSPD---------------------------------TVTYNIMIGSLCSRGKLDLALKV 215
Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
L ++ P ++ I+I + +G +D AL L EM G
Sbjct: 216 LNQLLSD----------------NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
++F YN +I G+C ++ ++E++R +E G +P + N + R L +
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
L+ KM + +P V ++LI LC+ GK EA L M ++G PD Y I
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
R+D+A+E + + GC PD+V YN +++ LCK + +A ++F ++ G P+ +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
+YN + + SG+ +A+ + M+ PD ITY ++I LC G D+A L +
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVD 498
Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
M P+ +T+ ++ G CK R A+ M G +P+ + LI
Sbjct: 499 MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 222/474 (46%), Gaps = 60/474 (12%)
Query: 59 EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFD 118
E P+ ++YN L+ CK +D L M+ + D T ++ C+ G+ D
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 119 KALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIH 178
AL V N+++ D+C + T+ +LI
Sbjct: 211 LALKVLNQLLS--------------------------------DNCQPTV--ITYTILIE 236
Query: 179 GFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITP 238
+ + VD+AL+L D+M G D Y+ II G+CK ++ A ++ ++ G P
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 239 D---FEILSKLITSCS--DEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
D + IL + + + +EGE L+ K E D N +T + ++ L +G I++A
Sbjct: 297 DVISYNILLRALLNQGKWEEGE-KLMTKMFSEKCDPNVVTY--SILITTLCRDGKIEEAM 353
Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
NLL+ LM KG ++P+ S+D +I ++G+LD+A+ M
Sbjct: 354 NLLK---------------LMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
GC+ ++ YN ++ LC + + +++ E+ ++ E G P + N+MF L D + A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 414 LNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
L+++ +M G +P + +N++ I LC+ G EAF L DM F P +V Y+ +
Sbjct: 458 LHMILEMMSNGIDPDEITYNSM-ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
G R++ A+ + + +GC P+ Y ++I G+ A AEA +L N+++
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 193/404 (47%), Gaps = 20/404 (4%)
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLL 275
C++ +L L M G PD + +KLI +G TL R++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLI-----KGFFTL--------RNIPKAV-- 144
Query: 276 CNSIMRILVSNGSIDQ-AYN-LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
+M IL G D AYN L+ K I D + + SP+T +++I+I +
Sbjct: 145 --RVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 202
Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
L GKLDLAL + ++ C V Y LI+ ++E+ +L+ EM G KP
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
FT N++ R +C+ V A +VR + ++G EP V +L++ L GK E + +T
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
M E P++V YS I L +++ A+ L + + G PD +Y+ +I+ C+
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
R+ A + MI+ G +P + YN ++ CK+G DQA+ ++ E SP+ +Y
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEV-GCSPNSSSY 441
Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
T+ L +G A+ + EM G P+ IT+ ++I+ LC+
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 193/436 (44%), Gaps = 22/436 (5%)
Query: 27 FMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDL 84
F P + LI + +++A + D+++ + P+ +YN ++ +LC +DL
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFS-PDTVTYNIMIGSLCSRGKLDL 211
Query: 85 VEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLV 143
L ++ T T L++ G D+AL + +E++ G D ++ ++
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 144 AFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFAS 203
K G VD+A E++ ++ + ++ +L+ + + + ++ +L KM
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDP 331
Query: 204 DAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVK-- 261
+ Y ++I LC++ ++E A+ L MK G+TPD LI + EG L + ++
Sbjct: 332 NVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL 391
Query: 262 EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
E + N+++ L NG DQA + + +VG S
Sbjct: 392 ETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL------GEVGC----------S 435
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
PN+SS++ + + L G AL + EM G + YN++I LC ++E++EL
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
L +M F P+ T N + C+ + A+N++ M G P T+LI+ +
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGF 555
Query: 442 HGKAMEAFRFLTDMVQ 457
G EA D+V+
Sbjct: 556 AGYRAEAMELANDLVR 571
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 237/489 (48%), Gaps = 21/489 (4%)
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
+ + R ++ + I VK S V K L+LF++M +Y+V+I GLCK K++
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIM 280
A QL+ EM + P + LI G E + V+E + + + N+++
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
+ L G ++ A N+L+ M D+G P+ +F I+ + + K
Sbjct: 292 KGLFKAGMVEDAENVLKEM------KDLGF----------VPDAFTFSILFDGYSSNEKA 335
Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELL-REMEESGFKPTHFTLNS 399
+ AL ++ G N + + L++ LC ++E++ E+L REM + G P N+
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNT 394
Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
M CR+ D+VGA + M QG +P LI+ C+ G+ A + + M +G
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
P + Y+ IGG D ++ +++ +G P+VV+Y +I+ LCK ++ EA+
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
+ +M +G+ P V YN+LI+G C G I+ A ML K+ +++TY TLIDG
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML-KKGIELNLVTYNTLIDG 573
Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
L + G+ +A L E+ KG P+ T+ +LI+G + + + MK G+KP
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 640 MFVFVALIS 648
+ + LIS
Sbjct: 634 LKTYHLLIS 642
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 168/680 (24%), Positives = 297/680 (43%), Gaps = 55/680 (8%)
Query: 40 LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
L ++ EA LF ++ EG+ P++ S LL+ L K+ + + + +
Sbjct: 119 LNESKMISEAADLFFALRNEGI-YPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRP 177
Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEII-DHGWVDEHVFSILLVAFSKWGEVDKACELI 158
K+ +Q K L +FN + D + ++++L+ K ++ A +L
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237
Query: 159 ERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKN 218
+ M + + T+ LI G+ K +K+ ++ ++M ++ ++ GL K
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297
Query: 219 KQLEMALQLYSEMKGSGITPDFEILSKLIT--SCSDEGELTLLVKEIWEDRDVNTMTLLC 276
+E A + EMK G PD S L S +++ E L V E D V C
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357
Query: 277 NSIMRILVSNGSIDQAYNLL-----QAMIKGEPIAD------------VGVEMLM--IFK 317
+ ++ L G I++A +L + ++ E I + VG M + + K
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417
Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEE 377
+ P+ +++ +I + G+++ A +M G +V YN LI G ++
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDK 477
Query: 378 SYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIK 437
+++L+EME++G P + ++ CLC+ ++ A + R M +G P V+ +LI
Sbjct: 478 CFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 438 ELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP 497
C GK +AFRF +M+++G ++V Y+ I GL ++ A +L +I G P
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKP 597
Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI---------------- 541
DV YN +ISG A V L+ EM G+ P++ TY+LLI
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 542 -----------NG----WCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
NG + G++++A +M+EK G D TY +LI G G+
Sbjct: 658 EMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL-DKTTYNSLILGQLKVGKL 716
Query: 587 DDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVAL 646
+ L +EM + P T+ ++ G C+ +A V +R M+EKG D+ + L
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776
Query: 647 ISAFLSELNPPLAFEVLKEM 666
+S E A V+ EM
Sbjct: 777 VSGLKEEWRSKEAEIVISEM 796
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 253/590 (42%), Gaps = 72/590 (12%)
Query: 8 ARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNY 67
ARR+ P + ++ C F +R M D ++ P+
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVR----------ERMKADHIE------PSLI 285
Query: 68 SYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEI 127
++N LL+ L K+ V+ E LKEM+D G+ D +T + L Y ++ + + AL V+
Sbjct: 286 TFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 128 IDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV 186
+D G ++ + SILL A K G+++KA E++ R + NE + +I G+ +K +
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 187 DKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKL 246
A + M K G D Y+ +I C+ ++E A + ++MK G++P E + L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 247 ITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSID----QAYNLLQAMIKG 302
I + E + E D N M +VS G++ + LL+A I
Sbjct: 466 IGGYGRKYEFDKCFDILKEMED--------NGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
+ D GV SP ++++I+ GK++ A +EM + G N+ Y
Sbjct: 518 RDMEDRGV----------SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
N LIDGL + +L E+ +LL E+ G KP FT NS+ +V + L +M+
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 423 QGHEPWVKHNTLLIKELCK--------------------------------HGKAMEAFR 450
G +P +K LLI LC HG +AF
Sbjct: 628 SGIKPTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
M+++ D Y++ I G + + ++ L ++ A P+ YNII+ G C
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746
Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRM 560
+ + A + EM KG + V N L++G + +A + +S M
Sbjct: 747 EVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 98/213 (46%), Gaps = 8/213 (3%)
Query: 24 SRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCS 81
SR + P + LI G G V+ L++++KR G+ P +Y+ L+ +LC
Sbjct: 591 SRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI-KPTLKTYHLLI-SLCTKEG 648
Query: 82 VDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSI 140
++L E EM D +L Y G +KA ++ ++I+ +D+ ++
Sbjct: 649 IELTERLFGEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNS 705
Query: 141 LLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSG 200
L++ K G++ + LI+ M+ + T+ +++ G + A + +M + G
Sbjct: 706 LILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKG 765
Query: 201 FASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
F D + + ++ GL + + + A + SEM G
Sbjct: 766 FLLDVCIGNELVSGLKEEWRSKEAEIVISEMNG 798
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/551 (26%), Positives = 244/551 (44%), Gaps = 56/551 (10%)
Query: 115 GQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTF 173
GQ D + ++ G+ E +F ++ + + G ++A E+ R+ + + K +
Sbjct: 90 GQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIY 149
Query: 174 CVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKG 233
++ + ++R+ ++ M + GF + Y+V++ LCKN +++ A +L EM
Sbjct: 150 NHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
G PD + +I+S + G LVKE
Sbjct: 210 KGCCPDAVSYTTVISSMCEVG----LVKE------------------------------- 234
Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
G E+ F+ P S ++ +IN L K+ A L REM +
Sbjct: 235 ---------------GRELAERFE----PVVSVYNALINGLCKEHDYKGAFELMREMVEK 275
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
G NV Y+ LI+ LCNS ++E ++ L +M + G P +TL+S+ + R A
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 414 LNLVRKM-RVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
L+L +M R G +P V L++ C HG ++A + M + G P+I Y + I
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 473 GLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
G +D A+ ++ + GCCP+VV Y ++ LC+ + EAE L M + P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
SV T+N I G C +G +D A +M ++ P+++TY L+DGL A R ++A L
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
E+ +G + T+ L+ G C P AL M G PD +I A+
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 653 ELNPPLAFEVL 663
+ A ++L
Sbjct: 576 QGKAERAAQML 586
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 196/408 (48%), Gaps = 26/408 (6%)
Query: 279 IMRILVSNGSIDQAYNLLQAM------------------IKGEPIADVGVEMLMIFKG-T 319
++R L +G +D LLQ M + +A+ VEM K
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
P+ ++ +++TLL + ++ + ++R+M + G NVF YN L+ LC +N+++ +
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
+LL EM G P + ++ +C VG + R++ + EP V LI L
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCE----VGLVKEGREL-AERFEPVVSVYNALINGL 256
Query: 440 CKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDV 499
CK AF + +MV++G P+++ YS I L + +++LA + GC P++
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 500 VAYNIIISGLCKAQRVAEAEDLFNEMITK-GLIPSVATYNLLINGWCKSGNIDQAMLCLS 558
+ ++ G +A DL+N+MI GL P+V YN L+ G+C GNI +A+ S
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 559 RMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKC 618
M E+ SP++ TY +LI+G G D A+ +WN+M GC PN + + ++ LC+
Sbjct: 377 HM-EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 619 DRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
+ + A +M ++ P + F A I A +V ++M
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 231/526 (43%), Gaps = 83/526 (15%)
Query: 51 MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
M++ +KR+G PN ++YN LL+ALCK+ VD + L EM + G D + T ++
Sbjct: 167 MVYRDMKRDGF-EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISS 225
Query: 111 YCNSG----------QFDKALSVFNEIIDHGWVDEH----------------------VF 138
C G +F+ +SV+N +I+ G EH +
Sbjct: 226 MCEVGLVKEGRELAERFEPVVSVYNALIN-GLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
S L+ G+++ A + +M N T L+ G + AL L+++M +
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 199 S-GFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
G + Y+ ++ G C + + A+ ++S M+ G +P+ LI + G L
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
V IW N M L ++V N+++A+ + + + ++ K
Sbjct: 405 GAVY-IW-----NKM-LTSGCCPNVVVYT-------NMVEALCRHSKFKEAESLIEIMSK 450
Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG-CMQNVFLYNNLIDGLCNSNRLE 376
+P+ +F+ I L G+LD A +FR+M Q C N+ YN L+DGL +NR+E
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510
Query: 377 ESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLI 436
E+Y L RE+ G + + T N++ C AL LV KM V G P ++I
Sbjct: 511 EAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570
Query: 437 KELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
CK GKA A + L D+V G +R
Sbjct: 571 LAYCKQGKAERAAQML-DLVSCG------------------------RRKWR-------- 597
Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
PDV++Y +I GLC++ + L MI+ G++PS+AT+++LIN
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 174/424 (41%), Gaps = 58/424 (13%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ-VYCNSGQFDKALS 122
PN SY+ L+ LC S ++L L +M G + YTL+ L++ + FD AL
Sbjct: 279 PNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALD 337
Query: 123 VFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGF 180
++N++I + +V ++ L+ F G + KA + M++ N +T+ LI+GF
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
K+ +D A+ +++KM SG + +Y ++ LC++ + + A L M P
Sbjct: 398 AKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSV 457
Query: 241 EILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMI 300
+ I D G L W ++ M +Q +
Sbjct: 458 PTFNAFIKGLCDAGRLD------WAEKVFRQM-----------------EQQHR------ 488
Query: 301 KGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVF 360
PN +++ +++ L K +++ A L RE+ G +
Sbjct: 489 -------------------CPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529
Query: 361 LYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR---QDVVGALNLV 417
YN L+ G CN+ + +L+ +M G P T+N + C++ + L+LV
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 418 RKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI-- 475
R + P V T +I LC+ + L M+ G +P I +S I I
Sbjct: 590 SCGR-RKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILD 648
Query: 476 DIKR 479
DI R
Sbjct: 649 DIVR 652
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 153/390 (39%), Gaps = 55/390 (14%)
Query: 20 DVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKS 79
++K C + L L++ G +A L++Q+ R PN +YN L++ C
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSH 365
Query: 80 CSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVF 138
++ M++ G + T L+ + G D A+ ++N+++ G + V+
Sbjct: 366 GNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVY 425
Query: 139 SILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTK 198
+ ++ A + + +A LIE M N + TF I G R+D A ++F +M +
Sbjct: 426 TNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 485
Query: 199 SGF-ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
+ Y+ ++ GL K ++E A L E+ G+
Sbjct: 486 QHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE-------------------- 525
Query: 258 LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFK 317
W NT+ +GS + + + G+ + D
Sbjct: 526 ------WSSSTYNTLL------------HGSCNAGLPGIALQLVGKMMVD---------- 557
Query: 318 GTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQ---NVFLYNNLIDGLCNSNR 374
SP+ + ++II K GK + A + ++ G + +V Y N+I GLC SN
Sbjct: 558 -GKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVISYTNVIWGLCRSNC 615
Query: 375 LEESYELLREMEESGFKPTHFTLNSMFRCL 404
E+ LL M +G P+ T + + C
Sbjct: 616 REDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 1 MASILSRARRIAPLRVLAQDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREG 60
M L R + L + + K C S I+ L G ++ A +F Q++++
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487
Query: 61 LCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKA 120
C PN +YN LL+ L K+ ++ +E+ G + T LL CN+G A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547
Query: 121 LSVFNE-IIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC---NIRLNEKTFCVL 176
L + + ++D DE +++++A+ K G+ ++A ++++ + C R + ++ +
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISYTNV 606
Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
I G + + + + L ++M +G A + V+I
Sbjct: 607 IWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 266/585 (45%), Gaps = 49/585 (8%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
P+ Y YN LLE+ K V+ V K+M G YT L++ C+S D A +
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 124 FNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
F+E+ + G +E F IL+ + K G DK EL+ M+ + N+ + ++ F +
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEM---------KG 233
+ R D + ++ +KM + G D ++ I LCK ++ A +++S+M +
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP 289
Query: 234 SGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
+ IT + ++ K + L + I E+ D+ ++ N ++ LV +G +A
Sbjct: 290 NSIT--YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY-NIWLQGLVRHGKFIEAE 346
Query: 294 NLLQAMIK---GEPI----------------ADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
+L+ M G I +D + ++ + V P+ ++ +++
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGY 406
Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
GK+D A SL +EM + C+ N + N L+ L R+ E+ ELLR+M E G+
Sbjct: 407 CSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDT 466
Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
T N + LC ++ A+ +V+ MRV G G ++ L D
Sbjct: 467 VTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL--------------GNLGNSYIGLVD 512
Query: 455 --MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
+++ LPD++ YS + GL R A LF ++ PD VAYNI I CK
Sbjct: 513 DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQ 572
Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
+++ A + +M KG S+ TYN LI G I + + M EK SP++ T
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEK-GISPNICT 631
Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCK 617
Y T I LC + +DA L +EM +K APN +F LI CK
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 162/614 (26%), Positives = 277/614 (45%), Gaps = 54/614 (8%)
Query: 103 TLTPLLQVYCNSGQFDKALSVFNEI---IDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
+L ++ ++ S DKA F + +++++LL + K V+ L +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136
Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
M C I TF +LI S VD A +LFD+M + G + + +++ G CK
Sbjct: 137 DMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG 196
Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG---ELTLLVKEIWEDRDVNTMTLLC 276
+ L+L + M+ G+ P+ I + +++S EG + +V+++ E+ V +
Sbjct: 197 LTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF- 255
Query: 277 NSIMRILVSNGSIDQA----------------------YNL-LQAMIKGEPIADVGVEML 313
NS + L G + A YNL L+ K + D
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 314 MIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSN 373
I + + S++I + L++ GK A ++ ++MT G +++ YN L+DGLC
Sbjct: 316 SIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLG 375
Query: 374 RLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNT 433
L ++ ++ M+ +G P T + C V A +L+++M P
Sbjct: 376 MLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCN 435
Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
+L+ L K G+ EA L M ++G+ D V + + GL +D A+E+ + + H
Sbjct: 436 ILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVH 495
Query: 494 G-----------------------CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
G C PD++ Y+ +++GLCKA R AEA++LF EM+ + L
Sbjct: 496 GSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL 555
Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
P YN+ I+ +CK G I A L M EK+ + TY +LI GL I + +
Sbjct: 556 QPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
L +EM+EKG +PN T+ I LC+ ++ A M +K + P++F F LI AF
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 651 LSELNPPLAFEVLK 664
+ +A EV +
Sbjct: 675 CKVPDFDMAQEVFE 688
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 161/684 (23%), Positives = 291/684 (42%), Gaps = 69/684 (10%)
Query: 7 RARRIAPLRVLAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVP 64
+ RR+ + L +D+V C ++P F LIR L V+ A LFD++ +G C P
Sbjct: 124 KERRVEFVSWLYKDMV--LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG-CKP 180
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
N +++ L+ CK+ D L M+ +G +K ++ +C G+ D + +
Sbjct: 181 NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMV 240
Query: 125 NEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI----RLNEKTFCVLIHG 179
++ + G V + V F+ + A K G+V A + M+ R N T+ +++ G
Sbjct: 241 EKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKG 300
Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
F K ++ A LF+ + ++ + Y++ + GL ++ + A + +M GI P
Sbjct: 301 FCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPS 360
Query: 240 FEILSKLITS------CSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAY 293
+ L+ SD + L+K D T L + + G +D A
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV----GKVDAAK 416
Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
+LLQ M++ + PN + +I++++L K G++ A L R+M +
Sbjct: 417 SLLQEMMRNNCL----------------PNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK---------------------- 391
G + N ++DGLC S L+++ E+++ M G
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520
Query: 392 -PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
P T +++ LC+ A NL +M + +P + I CK GK AFR
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580
Query: 451 FLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLC 510
L DM ++G + Y++ I GL ++ L ++ G P++ YN I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 511 KAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML----EKESG 566
+ ++V +A +L +EM+ K + P+V ++ LI +CK + D A + +KE
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG- 699
Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
Y+ + + L AG+ A L + ++G + L+ LCK D A
Sbjct: 700 -----LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 627 HFRMMKEKGMKPDMFVFVALISAF 650
M ++G D + +I
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGL 778
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 164/351 (46%), Gaps = 5/351 (1%)
Query: 320 VSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESY 379
++P T +F+++I L +D A LF EM + GC N F + L+ G C + ++
Sbjct: 143 IAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL 202
Query: 380 ELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKEL 439
ELL ME G P N++ CR + +V KMR +G P + I L
Sbjct: 203 ELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL 262
Query: 440 CKHGKAMEAFRFLTDMVQEGFL----PDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
CK GK ++A R +DM + +L P+ + Y+ + G + ++ A LF I +
Sbjct: 263 CKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
+ +YNI + GL + + EAE + +M KG+ PS+ +YN+L++G CK G + A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
+ ++++ PD +TY L+ G C G+ D A L EM C PN T L+ L
Sbjct: 383 IVG-LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL 441
Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
K R A R M EKG D ++ A E++K M
Sbjct: 442 WKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 223/522 (42%), Gaps = 56/522 (10%)
Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAA---MYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
F K + +DKA F ++ +S F + +Y++++ K +++E LY +M GI
Sbjct: 85 FAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI 143
Query: 237 TPDFEILSKLI-----TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
P + LI +SC D L E+ E + ++R G D+
Sbjct: 144 APQTYTFNLLIRALCDSSCVDAARE--LFDEMPE-KGCKPNEFTFGILVRGYCKAGLTDK 200
Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
LL AM E V PN ++ I+++ ++G+ D + + +M
Sbjct: 201 GLELLNAM---ESFG-------------VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR 244
Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF----KPTHFTLNSMFRCLCRR 407
+ G + ++ +N+ I LC ++ ++ + +ME + +P T N M + C+
Sbjct: 245 EEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV 304
Query: 408 QDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCY 467
+ A L +R ++ + ++ L +HGK +EA L M +G P I Y
Sbjct: 305 GLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSY 364
Query: 468 SAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMIT 527
+ + GL + + A + + +G CPD V Y ++ G C +V A+ L EM+
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR 424
Query: 528 KGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPD 587
+P+ T N+L++ K G I +A L +M EK G D +T ++DGLC +G D
Sbjct: 425 NNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGL-DTVTCNIIVDGLCGSGELD 483
Query: 588 DAIMLWNEME-----------------------EKGCAPNRITFMALITGLCKCDRPRAA 624
AI + M E C P+ IT+ L+ GLCK R A
Sbjct: 484 KAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543
Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
F M + ++PD + I F + AF VLK+M
Sbjct: 544 KNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/542 (26%), Positives = 242/542 (44%), Gaps = 49/542 (9%)
Query: 35 FLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
+++ VGL+E+A LF+ + RE + + SYN L+ L + E LK+M D
Sbjct: 296 LMLKGFCKVGLLEDAKTLFESI-RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTD 354
Query: 95 YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
G G Y+ L+ C G A ++ + +G + V + LL + G+VD
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDA 414
Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
A L++ M N N T +L+H K R+ +A +L KM + G+ D ++I+
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVD 474
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVN 270
GLC + +L+ A+++ M+ G L L S + L+ + E+ D+
Sbjct: 475 GLCGSGELDKAIEIVKGMRVHGSAA----LGNLGNSY-----IGLVDDSLIENNCLPDLI 525
Query: 271 TMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDII 330
T + L N + + G +A NL M+ GE + P++ +++I
Sbjct: 526 TYSTLLNGLCKA----GRFAEAKNLFAEMM-GEKL---------------QPDSVAYNIF 565
Query: 331 INTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGF 390
I+ K GK+ A + ++M + GC +++ YN+LI GL N++ E + L+ EM+E G
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 391 KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFR 450
P T N+ + LC + V A NL+ +M + P V LI+ CK + F
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----VPDF- 680
Query: 451 FLTDMVQEGFLPDI-VC------YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYN 503
DM QE F + +C YS L+ ++ A EL + G Y
Sbjct: 681 ---DMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYK 737
Query: 504 IIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
++ LCK + A + ++MI +G A +I+G K GN +A +M+E
Sbjct: 738 DLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEM 797
Query: 564 ES 565
S
Sbjct: 798 AS 799
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 17 LAQDVVK---SRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLL 73
+AQ+V + S C G + L + G + +A L + V G + + Y L+
Sbjct: 682 MAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL-GTFLYKDLV 740
Query: 74 EALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV 133
E+LCK +++ L +M D G+G+D L P++ G +A S +++++ V
Sbjct: 741 ESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASV 800
Query: 134 DE 135
E
Sbjct: 801 GE 802
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/504 (26%), Positives = 237/504 (47%), Gaps = 49/504 (9%)
Query: 107 LLQVYCNSGQFDKALSVFNEII--DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
L + +G + S+F+ I D+ V+ + +L++A++ + E +R
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
+L+ + L+ +K++R ++ +M + + ++V+I LCK ++ A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILV 284
+ +MK G +P+ + LI G
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLG------------------------------ 272
Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
NG + +A +L+ M++ + VSPN ++F+I+I+ KD L ++
Sbjct: 273 GNGKMYKADAVLKEMVEND----------------VSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
+F+EM NV YN+LI+GLCN ++ E+ + +M +G +P T N++
Sbjct: 317 KVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGF 376
Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
C+ + AL++ ++ QG P + +LI CK GK + F +M +EG +PD+
Sbjct: 377 CKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV 436
Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
Y+ I GL ++ A +LF + + G PD+V ++I++ G C+ +A L E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
M GL P TYN+++ G+CK GN+ A ++M ++ +V +Y L+ G G
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 585 RPDDAIMLWNEMEEKGCAPNRITF 608
+ +DA ML NEM EKG PNRIT+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITY 579
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 183/360 (50%), Gaps = 6/360 (1%)
Query: 295 LLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIG 354
L+ A++K ADV + + + PN +F+++IN L K GK++ A + +M G
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 355 CMQNVFLYNNLIDGLCN---SNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
C NV YN LIDG C + ++ ++ +L+EM E+ P T N + + ++
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 412 GALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
G++ + ++M Q +P V LI LC GK EA MV G P+++ Y+A I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 472 GGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLI 531
G + AL++F + G P YN++I CK ++ + L EM +G++
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 532 PSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIM 591
P V TYN LI G C++GNI+ A ++ K G PD++T+ L++G C G A M
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK--GLPDLVTFHILMEGYCRKGESRKAAM 491
Query: 592 LWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL-VHFRMMKEKGMKPDMFVFVALISAF 650
L EM + G P +T+ ++ G CK +AA + +M KE+ ++ ++ + L+ +
Sbjct: 492 LLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 204/449 (45%), Gaps = 38/449 (8%)
Query: 222 EMALQLYSEM-KGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIM 280
++ L+ YS + K S I+ E+ KL+ S ++ + + S +
Sbjct: 82 DLCLRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKI-----------------RSFL 124
Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
V NGS Q +++ A+ + D V N+ D+++ + +
Sbjct: 125 DGFVRNGSDHQVHSIFHAI----SMCD-----------NVCVNSIIADMLVLAYANNSRF 169
Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
+L F+ G + L+ L NR + + +EM +P FT N +
Sbjct: 170 ELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVV 229
Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK---HGKAMEAFRFLTDMVQ 457
LC+ + A +++ M+V G P V LI CK +GK +A L +MV+
Sbjct: 230 INALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVE 289
Query: 458 EGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAE 517
P++ ++ I G + ++++F+++ P+V++YN +I+GLC +++E
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 518 AEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLI 577
A + ++M++ G+ P++ TYN LING+CK+ + +A+ ++ + P Y LI
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS-VKGQGAVPTTRMYNMLI 408
Query: 578 DGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMK 637
D C G+ DD L EME +G P+ T+ LI GLC+ AA F + KG+
Sbjct: 409 DAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467
Query: 638 PDMFVFVALISAFLSELNPPLAFEVLKEM 666
PD+ F L+ + + A +LKEM
Sbjct: 468 PDLVTFHILMEGYCRKGESRKAAMLLKEM 496
Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 191/418 (45%), Gaps = 55/418 (13%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCN---SGQFDKA 120
PN +++N ++ ALCK+ ++ +++M+ YG + + L+ YC +G+ KA
Sbjct: 221 PNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKA 280
Query: 121 LSVFNEIIDHGWVDE-HVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHG 179
+V E++++ F+IL+ F K + + ++ + M D +++ N ++ LI+G
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
++ +A+ + DKM +G + Y+ +I G CKN L+ AL ++ +KG G P
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP- 399
Query: 240 FEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAM 299
T + N ++ G ID + L + M
Sbjct: 400 --------------------------------TTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 300 IKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNV 359
+ + DVG +++ +I L ++G ++ A LF ++T G + ++
Sbjct: 428 EREGIVPDVG----------------TYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDL 470
Query: 360 FLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRK 419
++ L++G C ++ LL+EM + G KP H T N + + C+ ++ A N+ +
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 420 MRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
M + V +L++ + GK +A L +M+++G +P+ + Y ++D
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVD 588
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 196/441 (44%), Gaps = 24/441 (5%)
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCN 165
L+ Y N+ +F+ F +G+ + L++A K + + M
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCK---NKQLE 222
I+ N TF V+I+ K +++KA + + M G + + Y+ +I G CK N ++
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE--DRDVNTMTLLCNSIM 280
A + EM + ++P+ + LI + L +K E D+DV + NS++
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 281 RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKL 340
L + G I +A ++ M+ V PN +++ +IN K+ L
Sbjct: 339 NGLCNGGKISEAISMRDKMVSA----------------GVQPNLITYNALINGFCKNDML 382
Query: 341 DLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSM 400
AL +F + G + +YN LID C ++++ + L EME G P T N +
Sbjct: 383 KEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 401 FRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGF 460
LCR ++ A L ++ +G V + +L++ C+ G++ +A L +M + G
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFH-ILMEGYCRKGESRKAAMLLKEMSKMGL 501
Query: 461 LPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCP-DVVAYNIIISGLCKAQRVAEAE 519
P + Y+ + G + A + + +V +YN+++ G + ++ +A
Sbjct: 502 KPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561
Query: 520 DLFNEMITKGLIPSVATYNLL 540
L NEM+ KGL+P+ TY ++
Sbjct: 562 MLLNEMLEKGLVPNRITYEIV 582
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 102/208 (49%), Gaps = 20/208 (9%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
LI +G +++ L ++++REG+ VP+ +YNCL+ LC++ +++ + ++
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGI-VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKA 154
G D T L++ YC G+ KA + E+ G H+ ++I++ + K G + A
Sbjct: 466 GLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 155 CELIERMD-DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
+ +M+ + +R+N ++ VL+ G+ +K +++ A L ++M + G + Y+++
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV-- 582
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFE 241
EM G PD E
Sbjct: 583 --------------KEEMVDQGFVPDIE 596
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%)
Query: 31 GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
G LI L G +E A LFDQ+ +GL P+ +++ L+E C+ M LK
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 91 EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKW 148
EM G T +++ YC G A ++ ++ + +V +++LL +S+
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 149 GEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRV-DKALQLFDKMTKS 199
G+++ A L+ M + + N T+ ++ V + V D LF+ TKS
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTKS 606
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 183/332 (55%), Gaps = 1/332 (0%)
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
P+ + ++N + ++ A+SL +M +IG ++ YN +ID LC + R+ ++++
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
+E+E G +P T ++ LC A L+ M + P V + L+ K
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
+GK +EA +MV+ PDIV YS+ I GL R+D A ++F + + GC DVV+
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
YN +I+G CKA+RV + LF EM +GL+ + TYN LI G+ ++G++D+A S+M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM- 391
Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
+ SPD+ TY L+ GLC G + A++++ +M+++ + +T+ +I G+CK +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSE 653
A F + KG+KPD+ + ++S ++
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 178/334 (53%), Gaps = 1/334 (0%)
Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
T L+D KL+ A+ LF +M + ++ +N L+ + + + L ++ME G +
Sbjct: 59 TRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
+T N + C C V AL+++ KM G+EP L+ C+ + +A +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
MV+ G+ PDIV Y+A I L KRV+ A + F++I G P+VV Y +++GLC +
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
R ++A L ++MI K + P+V TY+ L++ + K+G + +A M+ + S PD++T
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMV-RMSIDPDIVT 297
Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
Y++LI+GLC+ R D+A +++ M KGC + +++ LI G CK R + FR M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
++G+ + + LI F + A E +M
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 176/322 (54%), Gaps = 1/322 (0%)
Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
+F+I+IN ++ LALS+ +M ++G + +L++G C NR+ ++ L+ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
E G+KP N++ LC+ + V A + +++ +G P V T L+ LC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
+A R L+DM+++ P+++ YSA + + +V A ELF ++ PD+V Y+ +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKES 565
I+GLC R+ EA +F+ M++KG + V +YN LING+CK+ ++ M L R + +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK-LFREMSQRG 360
Query: 566 GSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAAL 625
+ +TY TLI G AG D A +++M+ G +P+ T+ L+ GLC AL
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 626 VHFRMMKEKGMKPDMFVFVALI 647
V F M+++ M D+ + +I
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVI 442
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 183/362 (50%), Gaps = 17/362 (4%)
Query: 289 IDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFR 348
++ A +L M+K P P+ F+ +++ ++K K D+ +SL +
Sbjct: 66 LNDAIDLFSDMVKSRPF----------------PSIVDFNRLLSAIVKLKKYDVVISLGK 109
Query: 349 EMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQ 408
+M +G +++ +N +I+ C ++ + +L +M + G++P T+ S+ CRR
Sbjct: 110 KMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRN 169
Query: 409 DVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYS 468
V A++LV KM G++P + +I LCK + +AF F ++ ++G P++V Y+
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 469 AAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITK 528
A + GL + R A L D+ P+V+ Y+ ++ K +V EA++LF EM+
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 529 GLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDD 588
+ P + TY+ LING C ID+A M+ K DV++Y TLI+G C A R +D
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVED 348
Query: 589 AIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALIS 648
+ L+ EM ++G N +T+ LI G + A F M G+ PD++ + L+
Sbjct: 349 GMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG 408
Query: 649 AF 650
Sbjct: 409 GL 410
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 220/501 (43%), Gaps = 58/501 (11%)
Query: 40 LGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGY 99
L + L + ++ D VK P+ +N LL A+ K D+V K+M+ G
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPF--PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 100 DKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIE 159
D YT ++ +C Q ALS+ +++ G+ + V
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRV---------------------- 156
Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
T L++GF +++RV A+ L DKM + G+ D Y+ II LCK K
Sbjct: 157 ------------TIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT----LLVKEIWEDRDVNTMTLL 275
++ A + E++ GI P+ + L+ + + LL I + N +T
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY- 263
Query: 276 CNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLL 335
++++ V NG + +A L + M++ ++ P+ ++ +IN L
Sbjct: 264 -SALLDAFVKNGKVLEAKELFEEMVRM----------------SIDPDIVTYSSLINGLC 306
Query: 336 KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHF 395
++D A +F M GC+ +V YN LI+G C + R+E+ +L REM + G
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 396 TLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDM 455
T N++ + + DV A +M G P + +L+ LC +G+ +A DM
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 456 VQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRV 515
+ DIV Y+ I G+ +V+ A LF + G PD+V Y ++SGLC +
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 516 AEAEDLFNEMITKGLIPSVAT 536
E E L+ +M +GL+ + T
Sbjct: 487 HEVEALYTKMKQEGLMKNDCT 507
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 215/453 (47%), Gaps = 23/453 (5%)
Query: 116 QFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFC 174
+ + A+ +F++++ V F+ LL A K + D L ++M+ IR + TF
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 175 VLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGS 234
++I+ F +V AL + KM K G+ D ++ G C+ ++ A+ L +M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 235 GITPDFEILSKLITS-CSDE--GELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQ 291
G PD + +I S C + + KEI E + + + +++ L ++
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 292 AYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMT 351
A LL MIK + ++PN ++ +++ +K+GK+ A LF EM
Sbjct: 244 AARLLSDMIKKK----------------ITPNVITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 352 QIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVV 411
++ ++ Y++LI+GLC +R++E+ ++ M G + N++ C+ + V
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 412 GALNLVRKMRVQGH-EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAA 470
+ L R+M +G V +NT LI+ + G +A F + M G PDI Y+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNT-LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 471 IGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
+GGL D ++ AL +F D+ D+V Y +I G+CK +V EA LF + KGL
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEK 563
P + TY +++G C G + + ++M ++
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 114/473 (24%), Positives = 200/473 (42%), Gaps = 89/473 (18%)
Query: 173 FCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK 232
F L+ VK + D + L KM G +D ++++I C Q+ +AL + +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 233 GSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQA 292
G PD + L+ N R + A
Sbjct: 148 KLGYEPDRVTIGSLV-----------------------------NGFCR----RNRVSDA 174
Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
+L+ M+ ++G + P+ +++ II++L K +++ A F+E+ +
Sbjct: 175 VSLVDKMV------EIGYK----------PDIVAYNAIIDSLCKTKRVNDAFDFFKEIER 218
Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
G NV Y L++GLCNS+R ++ LL +M + P T +++ + V+
Sbjct: 219 KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 413 ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIG 472
A L +M +P + + LI LC H + EA + MV +G L D+V Y+ I
Sbjct: 279 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 473 GLIDIKRVDLALELFRDICAHG-----------------------------------CCP 497
G KRV+ ++LFR++ G P
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 498 DVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA--ML 555
D+ YNI++ GLC + +A +F +M + + + TY +I G CK+G +++A +
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITF 608
C L + PD++TYTT++ GLC G + L+ +M+++G N T
Sbjct: 459 C---SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 183/400 (45%), Gaps = 30/400 (7%)
Query: 32 ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKE 91
+G L+ V +A L D++ G P+ +YN ++++LCK+ V+ KE
Sbjct: 157 TIGSLVNGFCRRNRVSDAVSLVDKMVEIGY-KPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 92 MQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGE 150
++ G + T T L+ CNS ++ A + +++I + +S LL AF K G+
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 151 VDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDV 210
V +A EL E M +I + T+ LI+G R+D+A Q+FD M G +D Y+
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 211 IIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD-- 268
+I G CK K++E ++L+ EM G+ + + LI G++ +E + D
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK-AQEFFSQMDFF 394
Query: 269 -VNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
++ N ++ L NG +++A + + M K E D+ ++
Sbjct: 395 GISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI----------------VTY 438
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
+I + K GK++ A SLF ++ G ++ Y ++ GLC L E L +M++
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP 427
G TL+ D+ + L++KM G+ P
Sbjct: 499 EGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAP 530
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 149/544 (27%), Positives = 257/544 (47%), Gaps = 58/544 (10%)
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
+L+V +S +KA +V+ +I+HG + + F+ +L + K G++++ ++ M N
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
I +E T+ +LI+GF K ++++A + M +SGFA ++ +I G CK + A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
+ EM +GI P + I C+ LC+
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYI--CA-----------------------LCDF------- 356
Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
G ID A LL +M +P+ S++ +++ +K GK A
Sbjct: 357 -GRIDDARELLSSM--------------------AAPDVVSYNTLMHGYIKMGKFVEASL 395
Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLC 405
LF ++ ++ YN LIDGLC S LE + L EM P T ++ +
Sbjct: 396 LFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 406 RRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIKELCKHGKAMEAFRFLTDMV-QEGFLPD 463
+ ++ A + +M +G +P + T + EL + G + +AFR +MV + PD
Sbjct: 456 KNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDKAFRLHEEMVATDHHAPD 514
Query: 464 IVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFN 523
+ Y+ I GL + + A+E R I G PD V Y +I G + + A +L++
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYD 574
Query: 524 EMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIA 583
EM+ K L PSV TY +LI G K+G ++QA + M +K P+V+T+ L+ G+C A
Sbjct: 575 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKA 633
Query: 584 GRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVF 643
G D+A +MEE+G PN+ ++ LI+ C ++ + ++ M +K ++PD +
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 644 VALI 647
AL
Sbjct: 694 RALF 697
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 222/493 (45%), Gaps = 31/493 (6%)
Query: 180 FVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD 239
+ KKS +K L F+KM + GF ++++ L ++ + A +Y M GI P
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 240 FEILSKLITSCSDEGELTLLVKEIW---EDRDVNTMTLLCNSIMRILVSNGSIDQA---- 292
+ ++ SC G+L V +IW + R++ + N ++ NG +++A
Sbjct: 238 VITFNTMLDSCFKAGDLER-VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 293 --------------YN-LLQAMIKGEPIADV-GVEMLMIFKGTVSPNTSSFDIIINTLLK 336
+N L++ K D GV M+ G + P TS+++I I L
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG-IYPTTSTYNIYICALCD 355
Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
G++D A RE+ +V YN L+ G + E+ L ++ P+ T
Sbjct: 356 FGRIDDA----RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVT 411
Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
N++ LC ++ GA L +M Q P V T L+K K+G A +M+
Sbjct: 412 YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEML 471
Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICA-HGCCPDVVAYNIIISGLCKAQRV 515
++G PD Y+ G + + D A L ++ A PD+ YN+ I GLCK +
Sbjct: 472 RKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNL 531
Query: 516 AEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTT 575
+A + ++ GL+P TY +I G+ ++G A ML K P VITY
Sbjct: 532 VKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL-YPSVITYFV 590
Query: 576 LIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKG 635
LI G AGR + A EM+++G PN +T AL+ G+CK A + M+E+G
Sbjct: 591 LIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEG 650
Query: 636 MKPDMFVFVALIS 648
+ P+ + + LIS
Sbjct: 651 IPPNKYSYTMLIS 663
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 214/487 (43%), Gaps = 33/487 (6%)
Query: 43 VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
G +E + ++ ++KR + + +YN L+ K+ ++ +M+ G+ Y
Sbjct: 251 AGDLERVDKIWLEMKRRNIEF-SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERM 161
+ PL++ YC G FD A V +E+++ G + ++I + A +G +D A EL+ M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
++ ++ L+HG++K + +A LFD + Y+ +I GLC++ L
Sbjct: 370 AAPDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR-------DVNTMTL 274
E A +L EM I PD + L+ G L++ E++++ D T
Sbjct: 426 EGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM-ATEVYDEMLRKGIKPDGYAYTT 484
Query: 275 LCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTL 334
+R+ G D+A+ L + M+ + A P+ + +++ I+ L
Sbjct: 485 RAVGELRL----GDSDKAFRLHEEMVATDHHA---------------PDLTIYNVRIDGL 525
Query: 335 LKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTH 394
K G L A+ R++ ++G + + Y +I G + + + + L EM P+
Sbjct: 526 CKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSV 585
Query: 395 FTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTD 454
T + + + A +M+ +G P V + L+ +CK G EA+R+L
Sbjct: 586 ITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Query: 455 MVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQR 514
M +EG P+ Y+ I D ++ + ++L++++ PD + + L K
Sbjct: 646 MEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 705
Query: 515 VAEAEDL 521
E E L
Sbjct: 706 SREVEFL 712
>sp|Q9ZUE9|PP149_ARATH Pentatricopeptide repeat-containing protein At2g06000
OS=Arabidopsis thaliana GN=At2g06000 PE=2 SV=1
Length = 536
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 217/429 (50%), Gaps = 19/429 (4%)
Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR 267
Y+++ LCK ++A Q++ MK G++P+ +L L++S +++G+L + +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSF 327
+V ++ NS++ LV ++ A L ++ + D T +F
Sbjct: 166 EVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND----------------TKTF 209
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
+I+I L GK + AL L M+ GC ++ YN LI G C SN L ++ E+ ++++
Sbjct: 210 NILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKS 269
Query: 388 SGF-KPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAM 446
P T SM C+ + A +L+ M G P +L+ K G+ +
Sbjct: 270 GSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEML 329
Query: 447 EAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIII 506
A M+ G PD+V +++ I G + +V L+ ++ A G P+ Y+I+I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 507 SGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESG 566
+ LC R+ +A +L ++ +K +IP YN +I+G+CK+G +++A + + M EK+
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM-EKKKC 448
Query: 567 SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALV 626
PD IT+T LI G C+ GR +A+ ++++M GC+P++IT +L++ L K + A
Sbjct: 449 KPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAY- 507
Query: 627 HFRMMKEKG 635
H + KG
Sbjct: 508 HLNQIARKG 516
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 163/337 (48%), Gaps = 6/337 (1%)
Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
FK + + +++++ +L K G DLA +F M G N L L+ +L
Sbjct: 95 FKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL 154
Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLV-RKMRVQGHEPWVKHNTL 434
+ LL + E + +NS+ L + V A+ L +R Q N +
Sbjct: 155 HFATALLLQSFE--VEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFN-I 211
Query: 435 LIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHG 494
LI+ LC GKA +A L M G PDIV Y+ I G ++ A E+F+D+ +
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 495 -CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQA 553
C PDVV Y +ISG CKA ++ EA L ++M+ G+ P+ T+N+L++G+ K+G + A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 554 MLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
+M+ PDV+T+T+LIDG C G+ LW EM +G PN T+ LI
Sbjct: 332 EEIRGKMIS-FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 614 GLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
LC +R A + K + P F++ +I F
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGF 427
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 202/468 (43%), Gaps = 60/468 (12%)
Query: 67 YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
++YN L +LCK+ DL + M+ G + L L+ + G+ A ++ +
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 127 IID-HGWVDEHVFSILLVAFSKWGEVDKACELIE---RMDDCNIRLNEKTFCVLIHGFVK 182
+ G V + LL K V+ A +L + R CN + KTF +LI G
Sbjct: 164 SFEVEGCC--MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN---DTKTFNILIRGLCG 218
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMK-GSGITPDFE 241
+ +KAL+L M+ G D Y+ +I G CK+ +L A +++ ++K GS +PD
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 242 ILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
+ +I+ C + G + +A +LL M++
Sbjct: 279 TYTSMISG-------------------------YCKA--------GKMREASSLLDDMLR 305
Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
L I+ P +F+++++ K G++ A + +M GC +V
Sbjct: 306 -----------LGIY-----PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVT 349
Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
+ +LIDG C ++ + + L EM G P FT + + LC ++ A L+ ++
Sbjct: 350 FTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLA 409
Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
+ P +I CK GK EA + +M ++ PD + ++ I G R+
Sbjct: 410 SKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMF 469
Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKG 529
A+ +F + A GC PD + + ++S L KA EA L N++ KG
Sbjct: 470 EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 156/352 (44%), Gaps = 25/352 (7%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
L+ L + VE+A LFD+ R C + ++N L+ LC + L M +
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSC-NDTKTFNILIRGLCGVGKAEKALELLGVMSGF 235
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV---DEHVFSILLVAFSKWGEVD 152
G D T L+Q +C S + +KA +F ++ G V D ++ ++ + K G++
Sbjct: 236 GCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 153 KACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVII 212
+A L++ M I TF VL+ G+ K + A ++ KM G D + +I
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 213 GGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEI---WEDRDV 269
G C+ Q+ +L+ EM G+ P+ S LI + +E L L +E+ +D+
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL-LKARELLGQLASKDI 413
Query: 270 NTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDI 329
+ N ++ G +++A +++ M K + P+ +F I
Sbjct: 414 IPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK----------------CKPDKITFTI 457
Query: 330 IINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
+I G++ A+S+F +M IGC + ++L+ L + +E+Y L
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/541 (27%), Positives = 241/541 (44%), Gaps = 42/541 (7%)
Query: 145 FSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASD 204
F + D A L +M+ I LN +F +LI F ++ +L F K+TK GF D
Sbjct: 116 FVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPD 175
Query: 205 AAMYDVIIGGLCKNKQLEMALQLYSEMKGS---------------GITPDFEILSKLITS 249
++ ++ GLC ++ AL L+ M + G+TP + LI
Sbjct: 176 VVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLING 235
Query: 250 CSDEGEL----TLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPI 305
EG + L+ K + + ++ +T +I+ + G A NLL M +
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTY--GTIVNGMCKMGDTKSALNLLSKMEETH-- 291
Query: 306 ADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNL 365
+ P+ + II+ L KDG A LF EM + G NVF YN +
Sbjct: 292 --------------IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCM 337
Query: 366 IDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGH 425
IDG C+ R ++ LLR+M E P T N++ + + A L +M +
Sbjct: 338 IDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCI 397
Query: 426 EPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE 485
P +I CKH + +A + + D++ PD+V ++ I KRVD ++
Sbjct: 398 FPDTVTYNSMIYGFCKHNRFDDA-KHMFDLMAS---PDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 486 LFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWC 545
L R+I G + YN +I G C+ + A+DLF EMI+ G+ P T N+L+ G+C
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 546 KSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNR 605
++ +++A L L +++ D + Y +I G+C + D+A L+ + G P+
Sbjct: 514 ENEKLEEA-LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 572
Query: 606 ITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKE 665
T+ +I+G C A V F MK+ G +PD + LI L + E++ E
Sbjct: 573 QTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 666 M 666
M
Sbjct: 633 M 633
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 152/547 (27%), Positives = 244/547 (44%), Gaps = 46/547 (8%)
Query: 65 NNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVF 124
N YS+N L++ C + ++ G+ D T LL C + +AL++F
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 125 NEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKS 184
+++ G+++ A L ++M + + TF LI+G +
Sbjct: 200 GYMVETGFLE-------------------AVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
RV +A L +KM G D Y I+ G+CK + AL L S+M+ + I PD I S
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 245 KLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIK 301
+I +G + L E+ E + + N ++ S G A LL+ MI+
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359
Query: 302 GEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFL 361
E ++P+ +F+ +I+ +K+GKL A L EM +
Sbjct: 360 RE----------------INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 362 YNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMR 421
YN++I G C NR +++ + M P T N++ CR + V + L+R++
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 422 VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVD 481
+G LI C+ A +M+ G PD + + + G + ++++
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 482 LALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLI 541
ALELF I D VAYNIII G+CK +V EA DLF + G+ P V TYN++I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 542 NGWCKSGNIDQAMLCLSRMLEKESG-SPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKG 600
+G+C I A + +M K++G PD TY TLI G AG D +I L +EM G
Sbjct: 580 SGFCGKSAISDANVLFHKM--KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Query: 601 CAPNRIT 607
+ + T
Sbjct: 638 FSGDAFT 644
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 131/475 (27%), Positives = 210/475 (44%), Gaps = 59/475 (12%)
Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPD---FEI 242
+D A+ FD M +S A + +IG + + ++A+ LY +M+ I + F I
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 243 LSKLITSC-------SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNL 295
L K C S G+LT ++ DV T N+++ L I +A L
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLT----KLGFQPDVVTF----NTLLHGLCLEDRISEALAL 198
Query: 296 LQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGC 355
M++ + V + M+ G ++P +F+ +IN L +G++ A +L +M G
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIG-LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 356 MQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALN 415
+V Y +++G+C + + LL +MEE+ KP DVV
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP----------------DVVIY-- 299
Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
+ +I LCK G +A ++M+++G P++ Y+ I G
Sbjct: 300 -----------------SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
R A L RD+ PDV+ +N +IS K ++ EAE L +EM+ + + P
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
TYN +I G+CK D A M SPDV+T+ T+ID C A R D+ + L E
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+ +G N T+ LI G C+ D AA F+ M G+ PD L+ F
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 179/394 (45%), Gaps = 36/394 (9%)
Query: 288 SIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLF 347
S+D A + M++ P F V N +I ++ + D+A+SL+
Sbjct: 86 SLDDAIDFFDYMVRSRP-----------FYTAVDCNK-----VIGVFVRMNRPDVAISLY 129
Query: 348 REMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRR 407
R+M N++ +N LI C+ ++L S ++ + GF+P T N++ LC
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189
Query: 408 QDVVGALNLVRKMRVQGH---------------EPWVKHNTLLIKELCKHGKAMEAFRFL 452
+ AL L M G P V LI LC G+ +EA +
Sbjct: 190 DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 453 TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKA 512
MV +G D+V Y + G+ + AL L + PDVV Y+ II LCK
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 513 QRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVIT 572
++A+ LF+EM+ KG+ P+V TYN +I+G+C G A L M+E+E +PDV+T
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI-NPDVLT 368
Query: 573 YTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMK 632
+ LI G+ +A L +EM + P+ +T+ ++I G CK +R A F +M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 633 EKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
PD+ F +I + ++L+E+
Sbjct: 429 ----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G +A LF ++ +G+ PN ++YNC+++ C + L++M + D T
Sbjct: 310 GHHSDAQYLFSEMLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLT 368
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMD 162
L+ G+ +A + +E++ + D ++ ++ F K D A + + M
Sbjct: 369 FNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLE 222
++ TF +I + + RVD+ +QL ++++ G ++ Y+ +I G C+ L
Sbjct: 429 SPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 223 MALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRI 282
A L+ EM G+ PD T+ CN ++
Sbjct: 485 AAQDLFQEMISHGVCPD---------------------------------TITCNILLYG 511
Query: 283 LVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDL 342
N +++A L + +I + +T +++III+ + K K+D
Sbjct: 512 FCENEKLEEALELFE----------------VIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555
Query: 343 ALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
A LF + G +V YN +I G C + + ++ L +M+++G +P + T N++ R
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 403 CLCRRQDVVGALNLVRKMRVQG 424
+ ++ ++ L+ +MR G
Sbjct: 616 GCLKAGEIDKSIELISEMRSNG 637
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 123/251 (49%), Gaps = 14/251 (5%)
Query: 53 FDQVKR--EGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQV 110
FD K + + P+ ++N +++ C++ VD L+E+ G + T L+
Sbjct: 417 FDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 111 YCNSGQFDKALSVFNEIIDHGWVDEHVF-SILLVAFSKWGEVDKACELIERMDDCNIRLN 169
+C + A +F E+I HG + + +ILL F + ++++A EL E + I L+
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 170 EKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYS 229
+ ++IHG K S+VD+A LF + G D Y+V+I G C + A L+
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 230 EMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR------DVNTMTLLCNSIMRIL 283
+MK +G PD + LI C GE+ ++ I E R D T+ ++ + L
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-----L 651
Query: 284 VSNGSIDQAYN 294
+++G +D++++
Sbjct: 652 ITDGRLDKSFS 662
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/577 (24%), Positives = 261/577 (45%), Gaps = 30/577 (5%)
Query: 30 PGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSC-SVDLVEMR 88
P + L GL+ EA +F+++ GL + + S N L L K C +
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVD-SCNVYLTRLSKDCYKTATAIIV 233
Query: 89 LKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSK 147
+E + G ++ + ++ C G+ +A + + G+ + + +S ++ + +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 148 WGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAM 207
+GE+DK +LIE M ++ N + +I + ++ +A + F +M + G D +
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 353
Query: 208 YDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWE-- 265
Y +I G CK + A + + EM ITPD + +I+ G++ K E
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 266 ----DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVS 321
+ D T T L N + G + A+ + MI+ S
Sbjct: 414 CKGLEPDSVTFTELINGYCKA----GHMKDAFRVHNHMIQA----------------GCS 453
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
PN ++ +I+ L K+G LD A L EM +IG N+F YN++++GLC S +EE+ +L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
+ E E +G T ++ C+ ++ A ++++M +G +P + +L+ C
Sbjct: 514 VGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCL 573
Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
HG + + L M+ +G P+ +++ + + A +++D+C+ G PD
Sbjct: 574 HGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
Y ++ G CKA+ + EA LF EM KG SV+TY++LI G+ K +A +M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM- 692
Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEE 598
+E + D + D RPD + +E+ E
Sbjct: 693 RREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 243/573 (42%), Gaps = 89/573 (15%)
Query: 97 WGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACE 156
WG D QV + G +A VF +++++G
Sbjct: 171 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYG------------------------- 205
Query: 157 LIERMDDCNI---RLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
L+ +D CN+ RL++ + + A+ +F + + G + A Y+++I
Sbjct: 206 LVLSVDSCNVYLTRLSKDCY-----------KTATAIIVFREFPEVGVCWNVASYNIVIH 254
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMT 273
+C+ +++ A L M+ G TPD V + +
Sbjct: 255 FVCQLGRIKEAHHLLLLMELKGYTPD-----------------------------VISYS 285
Query: 274 LLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINT 333
+ N R G +D+ + L++ M + KG + PN+ + II
Sbjct: 286 TVVNGYCRF----GELDKVWKLIEVMKR---------------KG-LKPNSYIYGSIIGL 325
Query: 334 LLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
L + KL A F EM + G + + +Y LIDG C + + + EM P
Sbjct: 326 LCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPD 385
Query: 394 HFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLT 453
T ++ C+ D+V A L +M +G EP T LI CK G +AFR
Sbjct: 386 VLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHN 445
Query: 454 DMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQ 513
M+Q G P++V Y+ I GL +D A EL ++ G P++ YN I++GLCK+
Sbjct: 446 HMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSG 505
Query: 514 RVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITY 573
+ EA L E GL TY L++ +CKSG +D+A L ML K P ++T+
Sbjct: 506 NIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTF 564
Query: 574 TTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKE 633
L++G C+ G +D L N M KG APN TF +L+ C + +AA ++ M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 634 KGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
+G+ PD + L+ N A+ + +EM
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 229/506 (45%), Gaps = 24/506 (4%)
Query: 31 GALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK 90
+ +I + +G ++EA+ L ++ +G P+ SY+ ++ C+ +D V ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGY-TPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 91 EMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWG 149
M+ G + Y ++ + C + +A F+E+I G + D V++ L+ F K G
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 150 EVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYD 209
++ A + M +I + T+ +I GF + + +A +LF +M G D+ +
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 210 VIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL---TLLVKEIWE- 265
+I G CK ++ A ++++ M +G +P+ + LI EG+L L+ E+W+
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 266 DRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
N T NSI+ L +G+I++A L+ GE A ++ +T
Sbjct: 486 GLQPNIFTY--NSIVNGLCKSGNIEEAVKLV-----GEFEA-----------AGLNADTV 527
Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
++ +++ K G++D A + +EM G + +N L++G C LE+ +LL M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKA 445
G P T NS+ + C R ++ A + + M +G P K L+K CK
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 446 MEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNII 505
EA+ +M +GF + YS I G + K+ A E+F + G D ++
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Query: 506 ISGLCKAQRVAEAEDLFNEMITKGLI 531
K +R D +E+I L+
Sbjct: 708 SDTKYKGKRPDTIVDPIDEIIENYLV 733
>sp|Q9LVD3|PP434_ARATH Pentatricopeptide repeat-containing protein At5g57250,
mitochondrial OS=Arabidopsis thaliana GN=At5g57250 PE=2
SV=2
Length = 971
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 169/681 (24%), Positives = 305/681 (44%), Gaps = 65/681 (9%)
Query: 43 VGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKY 102
+G E A F+ G+ VPN +Y L+ ALC+ VD V ++ ++D G+ +D
Sbjct: 184 IGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCV 243
Query: 103 TLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERM 161
+ + Y G AL E+++ G + V +SIL+ SK G V++A L+ +M
Sbjct: 244 FYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKM 303
Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
+ N T+ +I G K ++++A LF+++ G D +Y +I G+C+ L
Sbjct: 304 IKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED--RDVNTMTLLCNSI 279
A + +M+ GI P + +I G ++ E+ + DV T + L +S
Sbjct: 364 NRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS-EADEVSKGVVGDVITYSTLLDSY 422
Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLM--------------IFKGT----VS 321
+++ + ++ L+A I P+ V +L+ +++ ++
Sbjct: 423 IKVQNIDAVLEIRRRFLEAKI---PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
P+T+++ +I K G+++ AL +F E+ + + YN +ID LC L+ + E+
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRK-SSVSAAVCYNRIIDALCKKGMLDTATEV 538
Query: 382 LREMEESG-FKPTHFT----------------------------------LNSMFRCLCR 406
L E+ E G + H + LN LC+
Sbjct: 539 LIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCK 598
Query: 407 RQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLP-DIV 465
R A+ + MR +G V + ++K L + ++++A+ + + + D++
Sbjct: 599 RGSFEAAIEVYMIMRRKG--LTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVI 656
Query: 466 CYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEM 525
Y+ I GL + AL L + G + + YN +I+GLC+ + EA LF+ +
Sbjct: 657 DYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL 716
Query: 526 ITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGR 585
GL+PS TY +LI+ CK G A L M+ K P++I Y +++DG C G+
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK-GLVPNIIIYNSIVDGYCKLGQ 775
Query: 586 PDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
+DA+ + + P+ T ++I G CK AL F K+K + D F F+
Sbjct: 776 TEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLF 835
Query: 646 LISAFLSELNPPLAFEVLKEM 666
LI F ++ A +L+EM
Sbjct: 836 LIKGFCTKGRMEEARGLLREM 856
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 216/488 (44%), Gaps = 28/488 (5%)
Query: 156 ELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFD-KMTKSGFASDAAMYDVIIGG 214
+ ++D I +N + + ++ F+ +R + A + + ++K+ M D +I G
Sbjct: 47 QFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAEKFINIHISKASIFPRTHMLDSLIHG 106
Query: 215 --LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGEL--TLLVKEIWEDRDVN 270
+ ++ + L L ++ G P LI ++GE+ + V E+ +++VN
Sbjct: 107 FSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVN 166
Query: 271 TM--TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFD 328
+C++++ G + A ++ + G + PN ++
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVD---------------SGVLVPNLVTYT 211
Query: 329 IIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEES 388
+++ L + GK+D L R + G + Y+N I G L ++ REM E
Sbjct: 212 TLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEK 271
Query: 389 GFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEA 448
G + + + L + +V AL L+ KM +G EP + T +I+ LCK GK EA
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 449 FRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
F ++ G D Y I G+ ++ A + D+ G P ++ YN +I+G
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
LC A RV+EA++ ++KG++ V TY+ L++ + K NID + R LE +
Sbjct: 392 LCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKI-PM 445
Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
D++ L+ + G +A L+ M E P+ T+ +I G CK + AL F
Sbjct: 446 DLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 629 RMMKEKGM 636
+++ +
Sbjct: 506 NELRKSSV 513
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 127/476 (26%), Positives = 212/476 (44%), Gaps = 32/476 (6%)
Query: 185 RVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILS 244
R L + KSGF+ D + L + ++ LQ YS++ I + I S
Sbjct: 6 RTSSGLFSLQSLLKSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS 65
Query: 245 KLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEP 304
I S + L +ED + + I +S SI ++L ++I G
Sbjct: 66 --IVSWA------FLNLNRYEDAE---------KFINIHISKASIFPRTHMLDSLIHGFS 108
Query: 305 IA-DVGVEMLMIFKGTVS-----PNTSSFDIIINTLLKDGKLDLALSLFREMT--QIGCM 356
I D + L+I + + P++ +F +I ++ G++D A+ + MT +
Sbjct: 109 ITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYP 168
Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESG-FKPTHFTLNSMFRCLCRRQDVVGALN 415
+ F+ + +I G C + E + +SG P T ++ LC+ V +
Sbjct: 169 FDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRD 228
Query: 416 LVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLI 475
LVR++ +G E + I K G ++A +MV++G D+V YS I GL
Sbjct: 229 LVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLS 288
Query: 476 DIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVA 535
V+ AL L + G P+++ Y II GLCK ++ EA LFN +++ G+
Sbjct: 289 KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF 348
Query: 536 TYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNE 595
Y LI+G C+ GN+++A L M E+ P ++TY T+I+GLC+AGR +A +
Sbjct: 349 LYVTLIDGICRKGNLNRAFSMLGDM-EQRGIQPSILTYNTVINGLCMAGRVSEA-----D 402
Query: 596 MEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFL 651
KG + IT+ L+ K A L R E + D+ + L+ AFL
Sbjct: 403 EVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFL 458
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/676 (24%), Positives = 295/676 (43%), Gaps = 35/676 (5%)
Query: 19 QDVVKSRCFMSPGALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
++++K + LI L + G E+++ L ++++ G P +YN +L CK
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY-APTIVTYNTVLHWYCK 240
Query: 79 SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHV 137
L M+ G D T L+ C S + K + ++ +E
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 138 FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMT 197
++ L+ FS G+V A +L+ M + N TF LI G + + +AL++F M
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360
Query: 198 KSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEG--- 254
G Y V++ GLCKN + ++A Y MK +G+ + +I G
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 255 ELTLLVKEIWED---RDVNTMTLLCNSIMRI-----------------LVSNGSIDQA-- 292
E +L+ E+ +D D+ T + L N ++ L NG I
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 293 YNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQ 352
YN + E I + MI +G + + +F++++ +L K GK+ A R MT
Sbjct: 481 YNCCRMGCLKEAIR---IYEAMILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 353 IGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVG 412
G + N ++ LI+G NS +++ + EM + G PT FT S+ + LC+ +
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 413 ALNLVRKMR-VQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAI 471
A ++ + V V +NTLL +CK G +A +MVQ LPD Y++ I
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLT-AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 472 GGLIDIKRVDLALELFRDICAHG-CCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGL 530
GL + +A+ ++ A G P+ V Y + G+ KA + +M G
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715
Query: 531 IPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAI 590
P + T N +I+G+ + G I++ L M ++G P++ TY L+ G +
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSF 774
Query: 591 MLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAF 650
+L+ + G P+++T +L+ G+C+ + L + +G++ D + F LIS
Sbjct: 775 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC 834
Query: 651 LSELNPPLAFEVLKEM 666
+ AF+++K M
Sbjct: 835 CANGEINWAFDLVKVM 850
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/616 (23%), Positives = 263/616 (42%), Gaps = 25/616 (4%)
Query: 50 NMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQ 109
+ L + +KR+ +C P+ ++N L+ LC S + +++M+ G+ T +L
Sbjct: 179 SFLKEMLKRK-IC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 110 VYCNSGQFDKALSVFNEIIDHGWVDEHV--FSILLVAFSKWGEVDKACELIERMDDCNIR 167
YC G+F A+ + + + G VD V +++L+ + + K L+ M I
Sbjct: 237 WYCKKGRFKAAIELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 168 LNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQL 227
NE T+ LI+GF + +V A QL ++M G + + ++ +I G + AL++
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 228 YSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTM---TLLCNSIMRILV 284
+ M+ G+TP L+ E L + + N + + ++ L
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDL-ARGFYMRMKRNGVCVGRITYTGMIDGLC 414
Query: 285 SNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLAL 344
NG +D+A LL M K + P+ ++ +IN K G+ A
Sbjct: 415 KNGFLDEAVVLLNEMSKD----------------GIDPDIVTYSALINGFCKVGRFKTAK 458
Query: 345 SLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCL 404
+ + ++G N +Y+ LI C L+E+ + M G HFT N + L
Sbjct: 459 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 518
Query: 405 CRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDI 464
C+ V A +R M G P LI G+ ++AF +M + G P
Sbjct: 519 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 578
Query: 465 VCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNE 524
Y + + GL + A + + + A D V YN +++ +CK+ +A+A LF E
Sbjct: 579 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 638
Query: 525 MITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAG 584
M+ + ++P TY LI+G C+ G A+L + + P+ + YT +DG+ AG
Sbjct: 639 MVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAG 698
Query: 585 RPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFV 644
+ I +M+ G P+ +T A+I G + + M + P++ +
Sbjct: 699 QWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYN 758
Query: 645 ALISAFLSELNPPLAF 660
L+ + + +F
Sbjct: 759 ILLHGYSKRKDVSTSF 774
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 151/605 (24%), Positives = 257/605 (42%), Gaps = 65/605 (10%)
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHVFS--ILLVAFSKWGEVDKACELIERMDDC 164
L++VY G +L +F + +G+ + V++ +L + K GE ++ M
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGF-NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187
Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
I + TF +LI+ + +K+ L KM KSG+A Y+ ++ CK + + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247
Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELT---LLVKEIWEDRDVNTMTLLCNSIMR 281
++L MK G+ D + LI + LL++++ R ++ + N+++
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPNEVTYNTLIN 306
Query: 282 ILVSNGSIDQAYNLL---------------QAMIKGEPIADVGVEMLMIF-----KGTVS 321
+ G + A LL A+I G E L +F KG ++
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-LT 365
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
P+ S+ ++++ L K+ + DLA + M + G Y +IDGLC + L+E+ L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425
Query: 382 LREMEESGFKPTHFTLNSMFRCLCR------------RQDVVG----------------- 412
L EM + G P T +++ C+ R VG
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485
Query: 413 ------ALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVC 466
A+ + M ++GH +L+ LCK GK EA F+ M +G LP+ V
Sbjct: 486 MGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVS 545
Query: 467 YSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMI 526
+ I G + A +F ++ G P Y ++ GLCK + EAE +
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 527 TKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRP 586
YN L+ CKSGN+ +A+ M+++ S PD TYT+LI GLC G+
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQR-SILPDSYTYTSLISGLCRKGKT 664
Query: 587 DDAIMLWNEMEEKG-CAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVA 645
AI+ E E +G PN++ + + G+ K + +A + M G PD+ A
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 646 LISAF 650
+I +
Sbjct: 725 MIDGY 729
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 221/515 (42%), Gaps = 43/515 (8%)
Query: 174 CVLIHGFVKKSRVDKALQLFDKMT----KSGFA------------SDAAMYDVIIGGLCK 217
C+ H V+ D A + +++ KS F S+ ++YD++I +
Sbjct: 76 CITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLR 135
Query: 218 NKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE---LTLLVKEIWEDR---DVNT 271
++ +L+++ M G P + ++ S GE + +KE+ + + DV T
Sbjct: 136 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 195
Query: 272 MTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIII 331
+L N +L + GS +++ L+Q M K +P +++ ++
Sbjct: 196 FNILIN----VLCAEGSFEKSSYLMQKM----------------EKSGYAPTIVTYNTVL 235
Query: 332 NTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFK 391
+ K G+ A+ L M G +V YN LI LC SNR+ + Y LLR+M +
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 392 PTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRF 451
P T N++ V+ A L+ +M G P LI G EA +
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 452 LTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCK 511
M +G P V Y + GL DLA + + +G C + Y +I GLCK
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 512 AQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVI 571
+ EA L NEM G+ P + TY+ LING+CK G A + R+ + SP+ I
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY-RVGLSPNGI 474
Query: 572 TYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMM 631
Y+TLI C G +AI ++ M +G + TF L+T LCK + A R M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 632 KEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
G+ P+ F LI+ + + AF V EM
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 166/704 (23%), Positives = 273/704 (38%), Gaps = 136/704 (19%)
Query: 58 REGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQF 117
R+ + PN +YN L+ V + L EM +G + T L+ + + G F
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349
Query: 118 DKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVL 176
+AL +F + G V + +LL K E D A RM + + T+ +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409
Query: 177 IHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI 236
I G K +D+A+ L ++M+K G D Y +I G CK + + A ++ + G+
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469
Query: 237 TPDFEILSKLITSCSDEGELTLLVKEIWE-------DRDVNTMTLLCNSIMRILVSNGSI 289
+P+ I S LI +C G L ++ I+E RD T +L S L G +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIR-IYEAMILEGHTRDHFTFNVLVTS----LCKAGKV 524
Query: 290 DQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFRE 349
+A ++ M + PNT SFD +IN G+ A S+F E
Sbjct: 525 AEAEEFMRCMTSD----------------GILPNTVSFDCLINGYGNSGEGLKAFSVFDE 568
Query: 350 MTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLR-------------------------- 383
MT++G F Y +L+ GLC L E+ + L+
Sbjct: 569 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 628
Query: 384 ---------EMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNT 433
EM + P +T S+ LCR+ V A+ ++ +G+ P T
Sbjct: 629 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 688
Query: 434 LLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAH 493
+ + K G+ F M G PDIV +A I G + +++ +L ++
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 494 GCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSV------------------- 534
P++ YNI++ G K + V+ + L+ +I G++P
Sbjct: 749 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 808
Query: 535 ----------------ATYNLLINGWCKSGNID---------------------QAMLCL 557
T+N+LI+ C +G I+ AM+ +
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 868
Query: 558 ---------SRM----LEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM-EEKGCAP 603
SRM + K+ SP+ Y LI+GLC G A ++ EM K C P
Sbjct: 869 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 928
Query: 604 NRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALI 647
N + A++ L KC + A + R M + + P + F L+
Sbjct: 929 N-VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/553 (24%), Positives = 223/553 (40%), Gaps = 57/553 (10%)
Query: 169 NEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLY 228
N + +LI ++++ + +L++F M GF + I+G + K+ +
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181
Query: 229 SEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSN 286
EM I PD + LI EG E + + + E + N+++
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241
Query: 287 GSIDQAYNLLQAMIKGEPIADVGVEMLMIF-------------------KGTVSPNTSSF 327
G A LL M ADV ++I K + PN ++
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301
Query: 328 DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEE 387
+ +IN +GK+ +A L EM G N +N LIDG + +E+ ++ ME
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361
Query: 388 SGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAME 447
G P+ + + LC+ + A +M+ G T +I LCK+G E
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421
Query: 448 AFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALE-------------------LFR 488
A L +M ++G PDIV YSA I G + R A E L
Sbjct: 422 AVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIY 481
Query: 489 DICAHGCCPDVV----------------AYNIIISGLCKAQRVAEAEDLFNEMITKGLIP 532
+ C GC + + +N++++ LCKA +VAEAE+ M + G++P
Sbjct: 482 NCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541
Query: 533 SVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIML 592
+ +++ LING+ SG +A M K P TY +L+ GLC G +A
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 593 WNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLS 652
+ A + + + L+T +CK A+ F M ++ + PD + + +LIS
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 653 ELNPPLAFEVLKE 665
+ +A KE
Sbjct: 661 KGKTVIAILFAKE 673
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 154/637 (24%), Positives = 275/637 (43%), Gaps = 74/637 (11%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G ++EA +L +++ ++G+ P+ +Y+ L+ CK + + + G +
Sbjct: 417 GFLDEAVVLLNEMSKDGI-DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEH-VFSILLVAFSKWGEVDKACELIERMD 162
+ L+ C G +A+ ++ +I G +H F++L+ + K G+V +A E + M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 163 DCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGF--------------------- 201
I N +F LI+G+ KA +FD+MTK G
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 202 --------------ASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
A D MY+ ++ +CK+ L A+ L+ EM I PD + LI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 248 TSCSDEGE--LTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSI------------DQAY 293
+ +G+ + +L + E R +L N +M +G +Q
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARG----NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 711
Query: 294 NL--------LQAMIKG-------EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
NL AMI G E D+ EM G PN ++++I+++ K
Sbjct: 712 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG---PNLTTYNILLHGYSKRK 768
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
+ + L+R + G + + ++L+ G+C SN LE ++L+ G + +T N
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
+ C ++ A +LV+ M G ++ L ++ + E+ L +M ++
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888
Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
G P+ Y I GL + + A + ++ AH CP VA + ++ L K + EA
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLID 578
L M+ L+P++A++ L++ CK+GN+ +A L L ++ D+++Y LI
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEA-LELRVVMSNCGLKLDLVSYNVLIT 1007
Query: 579 GLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
GLC G A L+ EM+ G N T+ ALI GL
Sbjct: 1008 GLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 125/557 (22%), Positives = 228/557 (40%), Gaps = 63/557 (11%)
Query: 25 RCFMS----PGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK 78
RC S P + F LI G+ G +A +FD++ + G P ++Y LL+ LCK
Sbjct: 532 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH-PTFFTYGSLLKGLCK 590
Query: 79 SCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHV 137
+ E LK + D LL C SG KA+S+F E++ + D +
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 138 FSILL------------VAFSKWGE---------------VD---KACE------LIERM 161
++ L+ + F+K E VD KA + E+M
Sbjct: 651 YTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 710
Query: 162 DDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQL 221
D+ + T +I G+ + +++K L +M + Y++++ G K K +
Sbjct: 711 DNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 770
Query: 222 EMALQLYSEMKGSGITPDFEILSKLITSCSDEG--ELTLLVKEIWEDRDVNTMTLLCNSI 279
+ LY + +GI PD L+ + E+ L + + + R V N +
Sbjct: 771 STSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNML 830
Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
+ +NG I+ A++L++ M +G+ + + + D +++ L ++ +
Sbjct: 831 ISKCCANGEINWAFDLVKVM------TSLGISL----------DKDTCDAMVSVLNRNHR 874
Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
+ + EM++ G Y LI+GLC ++ ++ + EM P + ++
Sbjct: 875 FQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA 934
Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
M R L + A L+R M P + T L+ CK+G +EA M G
Sbjct: 935 MVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCG 994
Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
D+V Y+ I GL + LA EL+ ++ G + Y +I GL +
Sbjct: 995 LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGA 1054
Query: 520 D-LFNEMITKGLIPSVA 535
D + +++ +G I S++
Sbjct: 1055 DIILKDLLARGFITSMS 1071
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/638 (26%), Positives = 282/638 (44%), Gaps = 60/638 (9%)
Query: 70 NCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIID 129
N L AL + S+ + M G D T L++ + +AL V + I+
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 130 HGW-VDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRL-NEKTFCVLIHGFVKKSRVD 187
G D ++S+ + A K ++ A L+ M + + + +++T+ +I VK+ +D
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 188 KALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLI 247
A++L D+M G + + +I G CKN L AL L+ +M+ G +P+ S LI
Sbjct: 322 DAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLI 381
Query: 248 TSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIAD 307
GE+ + E ++ M +L S+ + ++Q +KG+
Sbjct: 382 EWFRKNGEMEKAL-EFYKK-------------MEVLGLTPSVFHVHTIIQGWLKGQKHE- 426
Query: 308 VGVEMLMIFKGTVSPNTSSF---DIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNN 364
E L +F + ++ + I++ L K GK D A L +M G NV YNN
Sbjct: 427 ---EALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 365 LIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQG 424
++ G C ++ + + + E G KP ++T + + R D AL +V M
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 425 HEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE-------------------------- 458
E +I LCK G+ +A L +M++E
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 459 ----------GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISG 508
G P+++ Y++ + GL R+D ALE+ ++ G D+ AY +I G
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 509 LCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSP 568
CK + A LF+E++ +GL PS YN LI+G+ GN+ A+ +ML K+
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML-KDGLRC 722
Query: 569 DVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
D+ TYTTLIDGL G A L+ EM+ G P+ I + ++ GL K + + F
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 629 RMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
MK+ + P++ ++ A+I+ E N AF + EM
Sbjct: 783 EEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/591 (25%), Positives = 277/591 (46%), Gaps = 29/591 (4%)
Query: 84 LVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHVF-SILL 142
LV + + +G+ + LL Y Q D A+ + N++++ + + + L
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205
Query: 143 VAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFA 202
A + + +A EL RM + + T +L+ +++ + +AL++ + + G
Sbjct: 206 SALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAE 265
Query: 203 SDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGI-TPDFEILSKLITSCSDEGELTLLVK 261
D+ +Y + + CK L MA L EMK + P E + +I + +G + ++
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIR 325
Query: 262 ---EIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKG 318
E+ D ++ + S++ N + A L M K P
Sbjct: 326 LKDEMLSD-GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGP-------------- 370
Query: 319 TVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEES 378
SPN+ +F ++I K+G+++ AL +++M +G +VF + +I G + EE+
Sbjct: 371 --SPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 379 YELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEP-WVKHNTLLIK 437
+L E E+G F N++ LC++ A L+ KM +G P V +N +++
Sbjct: 429 LKLFDESFETGLANV-FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 438 ELCKHGKAMEAFRFL-TDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCC 496
C+ K M+ R + ++++++G P+ YS I G ALE+ + +
Sbjct: 488 H-CRQ-KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 497 PDVVAYNIIISGLCKAQRVAEAEDLFNEMIT-KGLIPSVATYNLLINGWCKSGNIDQAML 555
+ V Y II+GLCK + ++A +L MI K L S +YN +I+G+ K G +D A+
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
M SP+VITYT+L++GLC R D A+ + +EM+ KG + + ALI G
Sbjct: 606 AYEEMC-GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
CK +A F + E+G+ P ++ +LIS F + N A ++ K+M
Sbjct: 665 CKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/569 (25%), Positives = 260/569 (45%), Gaps = 55/569 (9%)
Query: 49 ANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLK-EMQDYGWGYDKYTLTPL 107
AN L ++K + LCVP+ +Y ++ A K ++D +RLK EM G + T L
Sbjct: 287 ANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDA-IRLKDEMLSDGISMNVVAATSL 345
Query: 108 LQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNI 166
+ +C + AL +F+++ G V FS+L+ F K GE++KA E ++M+ +
Sbjct: 346 ITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGL 405
Query: 167 RLNEKTFCVLIHGFVKKSRVDKALQLFD-------------------------------- 194
+ +I G++K + ++AL+LFD
Sbjct: 406 TPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATEL 465
Query: 195 --KMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC-- 250
KM G + Y+ ++ G C+ K +++A ++S + G+ P+ S LI C
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 251 SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGV 310
+ + + L V ++ ++ +I+ L G +A LL MI+
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE--------- 576
Query: 311 EMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLC 370
+ + + S++ II+ K+G++D A++ + EM G NV Y +L++GLC
Sbjct: 577 ------EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLC 630
Query: 371 NSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVK 430
+NR++++ E+ EM+ G K ++ C+R ++ A L ++ +G P
Sbjct: 631 KNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQP 690
Query: 431 HNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDI 490
LI G + A M+++G D+ Y+ I GL+ + LA EL+ ++
Sbjct: 691 IYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEM 750
Query: 491 CAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNI 550
A G PD + Y +I++GL K + + +F EM + P+V YN +I G + GN+
Sbjct: 751 QAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNL 810
Query: 551 DQAMLCLSRMLEKESGSPDVITYTTLIDG 579
D+A ML+K PD T+ L+ G
Sbjct: 811 DEAFRLHDEMLDK-GILPDGATFDILVSG 838
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 191/443 (43%), Gaps = 70/443 (15%)
Query: 44 GLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYT 103
G +EA L +++ G+ PN SYN ++ C+ ++DL + + + G + YT
Sbjct: 457 GKTDEATELLSKMESRGIG-PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYT 515
Query: 104 LTPLLQVYCNSGQFDKALSVFNEIIDHGW-VDEHVFSILLVAFSKWGEVDKACELIERMD 162
+ L+ + AL V N + V+ V+ ++ K G+ KA EL+ M
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM- 574
Query: 163 DCNIRLNEKTFCV-------LIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGL 215
+ EK CV +I GF K+ +D A+ +++M +G + + Y ++ GL
Sbjct: 575 -----IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 216 CKNKQLEMALQLYSEMKGSGITPDFEILSKLITSC---SDEGELTLLVKEIWEDRDVNTM 272
CKN +++ AL++ EMK G+ D LI S+ + L E+ E+ +N
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE-GLNPS 688
Query: 273 TLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIIN 332
+ NS++ + G++ A +L + M+K D+G ++ +I+
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG----------------TYTTLID 732
Query: 333 TLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKP 392
LLKDG L LA L+ EM +G + + +Y +++GL + + ++ EM+++ P
Sbjct: 733 GLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 792
Query: 393 THFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFL 452
N++ + GH + G EAFR
Sbjct: 793 NVLIYNAV---------------------IAGH--------------YREGNLDEAFRLH 817
Query: 453 TDMVQEGFLPDIVCYSAAIGGLI 475
+M+ +G LPD + + G +
Sbjct: 818 DEMLDKGILPDGATFDILVSGQV 840
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 10/194 (5%)
Query: 32 ALGFLIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCK----SCSVDLVEM 87
A G LI +E A+ LF ++ EGL P+ YN L+ ++DL +
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLN-PSQPIYNSLISGFRNLGNMVAALDLYKK 714
Query: 88 RLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFS 146
LK+ G D T T L+ G A ++ E+ G V DE ++++++ S
Sbjct: 715 MLKD----GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLS 770
Query: 147 KWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAA 206
K G+ K ++ E M N+ N + +I G ++ +D+A +L D+M G D A
Sbjct: 771 KKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGA 830
Query: 207 MYDVIIGGLCKNKQ 220
+D+++ G N Q
Sbjct: 831 TFDILVSGQVGNLQ 844
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 227/462 (49%), Gaps = 20/462 (4%)
Query: 207 MYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWED 266
+Y+VII +++ L +++ ++EM +G P + L+T E+
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 267 RDVNTMTLLCNSIM-RILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTS 325
+ + + I+ + G I+++++LL + + G SPN
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL------TEFGF----------SPNVV 199
Query: 326 SFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREM 385
+ +I+ K G+++ A LF EM ++G + N Y LI+GL + ++ +E+ +M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 386 EESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHE-PWVKHNTLLIKELCKHGK 444
+E G P +T N + LC+ A + +MR +G V +NTL I LC+ K
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL-IGGLCREMK 318
Query: 445 AMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNI 504
EA + + M +G P+++ Y+ I G + ++ AL L RD+ + G P +V YNI
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 505 IISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKE 564
++SG C+ + A + EM +G+ PS TY +LI+ + +S N+++A+ L +E+
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ-LRLSMEEL 437
Query: 565 SGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAA 624
PDV TY+ LI G CI G+ ++A L+ M EK C PN + + +I G CK A
Sbjct: 438 GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRA 497
Query: 625 LVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
L + M+EK + P++ + +I E A ++++M
Sbjct: 498 LKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM 539
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 239/514 (46%), Gaps = 65/514 (12%)
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLV------AFSKWGEVDKACELIE 159
++ Y S + ++S FNE++D+G+V + F+ LL +F++W
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE----- 154
Query: 160 RMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNK 219
+ + L+ +F +LI G + ++K+ L ++T+ GF+ + +Y +I G CK
Sbjct: 155 --NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKG 212
Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSI 279
++E A L+ EM G+L L+ E T T+L N +
Sbjct: 213 EIEKAKDLFFEM----------------------GKLGLVANE-------RTYTVLINGL 243
Query: 280 MRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGK 339
+ NG Q + + + M + V PN +++ ++N L KDG+
Sbjct: 244 FK----NGVKKQGFEMYEKMQED----------------GVFPNLYTYNCVMNQLCKDGR 283
Query: 340 LDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNS 399
A +F EM + G N+ YN LI GLC +L E+ +++ +M+ G P T N+
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 400 MFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEG 459
+ C + AL+L R ++ +G P + +L+ C+ G A + + +M + G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 460 FLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAE 519
P V Y+ I ++ A++L + G PDV Y+++I G C ++ EA
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 520 DLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDG 579
LF M+ K P+ YN +I G+CK G+ +A+ L M EKE +P+V +Y +I+
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL-APNVASYRYMIEV 522
Query: 580 LCIAGRPDDAIMLWNEMEEKGCAPNRITFMALIT 613
LC + +A L +M + G P+ + ++LI+
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPS-TSILSLIS 555
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 214/494 (43%), Gaps = 49/494 (9%)
Query: 69 YNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEII 128
Y ++ + +S S++L EM D G+ LL S F++ S FNE
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 129 DHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDK 188
+D + F IL+ + GE++K+ +L+ + + N + LI G KK ++K
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 189 ALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSKLIT 248
A LF +M K G ++ Y V+I GL KN + ++Y +M+ G+ P+
Sbjct: 217 AKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTY----- 271
Query: 249 SCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADV 308
N +M L +G A+ + M +
Sbjct: 272 ----------------------------NCVMNQLCKDGRTKDAFQVFDEMRE------- 296
Query: 309 GVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
+G VS N +++ +I L ++ KL+ A + +M G N+ YN LIDG
Sbjct: 297 --------RG-VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPW 428
C +L ++ L R+++ G P+ T N + CR+ D GA +V++M +G +P
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 429 VKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFR 488
T+LI + +A + M + G +PD+ YS I G +++ A LF+
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 489 DICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSG 548
+ C P+ V YN +I G CK A L EM K L P+VA+Y +I CK
Sbjct: 468 SMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKER 527
Query: 549 NIDQAMLCLSRMLE 562
+A + +M++
Sbjct: 528 KSKEAERLVEKMID 541
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 171/394 (43%), Gaps = 59/394 (14%)
Query: 67 YSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNE 126
YS+ L++ C++ ++ L E+ ++G+ + T L+ C G+ +KA +F E
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 127 IIDHGWV-DEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSR 185
+ G V +E +++L+ K G + E+ E+M + + N T+ +++ K R
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 186 VDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEILSK 245
A Q+FD+M + G + + Y+ +IGGLC+ +L A ++ +MK GI P+ +
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 246 LITSCSDEGEL--------------------------------------TLLVKEIWEDR 267
LI G+L +VKE+ E+R
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM-EER 402
Query: 268 DVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMI------------ 315
+ + ++ + ++++A L +M + + DV ++I
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 316 ---FKGTVSPNTSSFDIIINTLL----KDGKLDLALSLFREMTQIGCMQNVFLYNNLIDG 368
FK V N ++I NT++ K+G AL L +EM + NV Y +I+
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 369 LCNSNRLEESYELLREMEESGFKPTHFTLNSMFR 402
LC + +E+ L+ +M +SG P+ L+ + R
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILSLISR 556
Score = 86.7 bits (213), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Query: 36 LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDY 95
LI VG + +A L +K GL P+ +YN L+ C+ +KEM++
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLS-PSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 96 GWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWV-DEHVFSILLVAFSKWGEVDKA 154
G K T T L+ + S +KA+ + + + G V D H +S+L+ F G++++A
Sbjct: 403 GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 155 CELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGG 214
L + M + N NE + +I G+ K+ +AL+L +M + A + A Y +I
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEV 522
Query: 215 LCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELT 257
LCK ++ + A +L +M SGI P ILS LI+ ++ ++
Sbjct: 523 LCKERKSKEAERLVEKMIDSGIDPSTSILS-LISRAKNDSHVS 564
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 214/431 (49%), Gaps = 21/431 (4%)
Query: 220 QLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRD---VNTMTLLC 276
+L+ +L L+ M P S+L+++ S + +++ +WE + C
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIY-LWEQMQMLGIPHNLCTC 119
Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
N ++ + A + L MIK +G E P+ +F ++N +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIK------LGHE----------PSIVTFGSLLNGFCR 163
Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
++ AL +F +M +G NV +YN +IDGLC S +++ + +LL ME+ G P T
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
NS+ LC A +V M + P V LI K G+ EA F +M+
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
+ PDIV YS I GL R+D A E+F + + GC PDVV Y+I+I+G CK+++V
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
LF EM +G++ + TY +LI G+C++G ++ A RM+ P++ITY L
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC-GVHPNIITYNVL 402
Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGM 636
+ GLC G+ + A+++ +M++ G + +T+ +I G+CK A + + +G+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 637 KPDMFVFVALI 647
PD++ + ++
Sbjct: 463 MPDIWTYTTMM 473
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 223/463 (48%), Gaps = 23/463 (4%)
Query: 181 VKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDF 240
++ ++D +L LF M + A + ++ + K K+ ++ + L+ +M+ GI +
Sbjct: 57 IRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNL 116
Query: 241 ---EILSKLITSCSDEG-ELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLL 296
IL CS L+ L K I + + +T GS LL
Sbjct: 117 CTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF------------GS------LL 158
Query: 297 QAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCM 356
+G+ + D + PN ++ II+ L K ++D AL L M + G
Sbjct: 159 NGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG 218
Query: 357 QNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNL 416
+V YN+LI GLC+S R ++ ++ M + P FT N++ + V A
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF 278
Query: 417 VRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLID 476
+M + +P + +LLI LC + + EA MV +G PD+V YS I G
Sbjct: 279 YEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 477 IKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVAT 536
K+V+ ++LF ++ G + V Y I+I G C+A ++ AE++F M+ G+ P++ T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 537 YNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEM 596
YN+L++G C +G I++A++ L+ M +K D++TY +I G+C AG DA ++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 597 EEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPD 639
+G P+ T+ ++ GL K R A FR MKE G+ P+
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 222/504 (44%), Gaps = 85/504 (16%)
Query: 63 VPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALS 122
+P+ ++ LL A+ K D+V ++MQ G ++ T LL +C Q ALS
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 123 VFNEIIDHGWVDEHVFSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
++I G H SI+ TF L++GF +
Sbjct: 138 FLGKMIKLG----HEPSIV------------------------------TFGSLLNGFCR 163
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
RV AL +FD+M G+ + +Y+ II GLCK+KQ++ AL L + M+ GI PD
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 243 LSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQAMIKG 302
+ LI+ L S+G A ++ M K
Sbjct: 224 YNSLISG---------------------------------LCSSGRWSDATRMVSCMTKR 250
Query: 303 EPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLY 362
E + P+ +F+ +I+ +K+G++ A + EM + ++ Y
Sbjct: 251 E----------------IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 363 NNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRV 422
+ LI GLC +RL+E+ E+ M G P T + + C+ + V + L +M
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 423 QGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDL 482
+G T+LI+ C+ GK A MV G P+I+ Y+ + GL D +++
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 483 ALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLIN 542
AL + D+ +G D+V YNIII G+CKA VA+A D++ + +GL+P + TY ++
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMML 474
Query: 543 GWCKSGNIDQAMLCLSRMLEKESG 566
G K G +A +M KE G
Sbjct: 475 GLYKKGLRREADALFRKM--KEDG 496
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 171/351 (48%), Gaps = 1/351 (0%)
Query: 316 FKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRL 375
F N S + ++ ++ KLD +L LF M Q + ++ ++ L+ + +
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 376 EESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLL 435
+ L +M+ G T N + C CR + AL+ + KM GHEP + L
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 436 IKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGC 495
+ C+ + +A MV G+ P++V Y+ I GL K+VD AL+L + G
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 496 CPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAML 555
PDVV YN +ISGLC + R ++A + + M + + P V T+N LI+ K G + +A
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 556 CLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGL 615
M+ + S PD++TY+ LI GLC+ R D+A ++ M KGC P+ +T+ LI G
Sbjct: 278 FYEEMI-RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 616 CKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
CK + + F M ++G+ + + LI + +A E+ + M
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 168/345 (48%), Gaps = 1/345 (0%)
Query: 322 PNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYEL 381
P+ + F +++ + K K D+ + L+ +M +G N+ N L++ C ++L +
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 382 LREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCK 441
L +M + G +P+ T S+ CR V AL + +M G++P V +I LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 442 HGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVA 501
+ A L M ++G PD+V Y++ I GL R A + + PDV
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 502 YNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRML 561
+N +I K RV+EAE+ + EMI + L P + TY+LLI G C +D+A M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 562 EKESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRP 621
K PDV+TY+ LI+G C + + + + L+ EM ++G N +T+ LI G C+ +
Sbjct: 319 SKGC-FPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 622 RAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLKEM 666
A FR M G+ P++ + L+ A +L +M
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 22/352 (6%)
Query: 46 VEEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLT 105
V +A +FDQ+ G PN YN +++ LCKS VD L M+ G G D T
Sbjct: 167 VYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 106 PLLQVYCNSGQFDKALSVFNEIIDHG-WVDEHVFSILLVAFSKWGEVDKACELIERMDDC 164
L+ C+SG++ A + + + + D F+ L+ A K G V +A E E M
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 165 NIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
++ + T+ +LI+G SR+D+A ++F M G D Y ++I G CK+K++E
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 225 LQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDR---DVNTMTLLCNSIMR 281
++L+ EM G+ + + LI G+L + +EI+ V+ + N ++
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN-VAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 282 ILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLD 341
L NG I++A +L M K AD+ +++III + K G++
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADI----------------VTYNIIIRGMCKAGEVA 448
Query: 342 LALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPT 393
A ++ + G M +++ Y ++ GL E+ L R+M+E G P
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 239/532 (44%), Gaps = 51/532 (9%)
Query: 98 GYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACE 156
G Y +L+ + + D A+ +F + + FS LL A +K + D
Sbjct: 40 GKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVIS 99
Query: 157 LIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLC 216
E+M+ I N T+ +LI+ F + SR+ AL L KM K G+ D + ++ G C
Sbjct: 100 FGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC 159
Query: 217 KNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLC 276
++ A+ L +M G PD + LI
Sbjct: 160 HGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG--------------------------- 192
Query: 277 NSIMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLK 336
L + +A L+ M++ +G P+ ++ ++N L K
Sbjct: 193 ------LFLHNKASEAVALIDRMVQ---------------RG-CQPDLVTYGAVVNGLCK 230
Query: 337 DGKLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFT 396
G DLAL+L +M NV +Y+ +ID LC +++ L EME G +P T
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 397 LNSMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMV 456
+S+ CLC A L+ M + P + + LI K GK ++A + +M+
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 457 QEGFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVA 516
+ P+I YS+ I G + R+ A ++ + C P+VV YN +I+G CKA+RV
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVD 410
Query: 517 EAEDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTL 576
+ +LF EM +GL+ + TY LI+G+ ++ + D A + +M+ P+++TY L
Sbjct: 411 KGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNIL 469
Query: 577 IDGLCIAGRPDDAIMLWNEMEEKGCAPNRITFMALITGLCKCDRPRAALVHF 628
+DGLC G+ A++++ ++ P+ T+ +I G+CK + + ++F
Sbjct: 470 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 185/356 (51%), Gaps = 1/356 (0%)
Query: 294 NLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQI 353
+LL G I+D + + + P+T +F +I+ L K A++L M Q
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 354 GCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGA 413
GC ++ Y +++GLC + + LL +ME + + +++ LC+ + A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 414 LNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGG 473
LNL +M +G P V + LI LC +G+ +A R L+DM++ P++V +SA I
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 474 LIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPS 533
+ ++ A +L+ ++ P++ Y+ +I+G C R+ EA+ + MI K +P+
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 534 VATYNLLINGWCKSGNIDQAMLCLSRMLEKESGSPDVITYTTLIDGLCIAGRPDDAIMLW 593
V TYN LING+CK+ +D+ M L R + + + +TYTTLI G A D+A M++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGME-LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 451
Query: 594 NEMEEKGCAPNRITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISA 649
+M G PN +T+ L+ GLCK + A+V F ++ M+PD++ + +I
Sbjct: 452 KQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 189/422 (44%), Gaps = 50/422 (11%)
Query: 279 IMRILVSNGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDG 338
++R +S+ +D A L M + P P+ F +++ + K
Sbjct: 49 VLRTGLSDIELDDAIGLFGVMAQSRPF----------------PSIIEFSKLLSAIAKMN 92
Query: 339 KLDLALSLFREMTQIGCMQNVFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLN 398
K DL +S +M +G N++ YN LI+ C +RL + LL +M + G++P TLN
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 399 SMFRCLCRRQDVVGALNLVRKMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQE 458
S+ C + A+ LV +M G++P T LI L H KA EA + MVQ
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR 212
Query: 459 GFLPDIVCYSAAIGGLIDIKRVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEA 518
G PD+V Y A + GL DLAL L + A +VV Y+ +I LCK + +A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 519 EDLFNEMITKGLIPSVATYNLLINGWCKSGNIDQAMLCLSRMLE---------------- 562
+LF EM KG+ P+V TY+ LI+ C G A LS M+E
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 563 ------------------KESGSPDVITYTTLIDGLCIAGRPDDAIMLWNEMEEKGCAPN 604
K S P++ TY++LI+G C+ R +A + M K C PN
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 605 RITFMALITGLCKCDRPRAALVHFRMMKEKGMKPDMFVFVALISAFLSELNPPLAFEVLK 664
+T+ LI G CK R + FR M ++G+ + + LI F + A V K
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 665 EM 666
+M
Sbjct: 453 QM 454
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 226/490 (46%), Gaps = 58/490 (11%)
Query: 64 PNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSV 123
P+ ++ LL A+ K DLV ++M+ G ++ YT L+ +C + AL++
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 124 FNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVK 182
+++ G+ + V + LL F + A L+++M + + + TF LIHG
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 183 KSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMALQLYSEMKGSGITPDFEI 242
++ +A+ L D+M + G D Y ++ GLCK ++AL L ++M+ + I + I
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 243 LSKLITSC----SDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVSNGSIDQAYNLLQA 298
S +I S ++ L L + E++ V + +S++ L + G A LL
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTE--MENKGVRPNVITYSSLISCLCNYGRWSDASRLLSD 313
Query: 299 MIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALSLFREMTQIGCMQN 358
MI+ + ++PN +F +I+ +K GKL A L+ EM + N
Sbjct: 314 MIERK----------------INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357
Query: 359 VFLYNNLIDGLCNSNRLEESYELLREMEESGFKPTHFTLNSMFRCLCRRQDVVGALNLVR 418
+F Y++LI+G C +RL E+ ++L M P T N++ C+ + V
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRV-------- 409
Query: 419 KMRVQGHEPWVKHNTLLIKELCKHGKAMEAFRFLTDMVQEGFLPDIVCYSAAIGGLIDIK 478
K ME FR +M Q G + + V Y+ I G +
Sbjct: 410 ------------------------DKGMELFR---EMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 479 RVDLALELFRDICAHGCCPDVVAYNIIISGLCKAQRVAEAEDLFNEMITKGLIPSVATYN 538
D A +F+ + + G P+++ YNI++ GLCK ++A+A +F + + P + TYN
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYN 502
Query: 539 LLINGWCKSG 548
++I G CK+G
Sbjct: 503 IMIEGMCKAG 512
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 148/329 (44%), Gaps = 16/329 (4%)
Query: 47 EEANMLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTP 106
EA L D++ + G C P+ +Y ++ LCK DL L +M+ + +
Sbjct: 200 SEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258
Query: 107 LLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDKACELIERMDDCN 165
++ C D AL++F E+ + G + +S L+ +G A L+ M +
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 166 IRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIGGLCKNKQLEMAL 225
I N TF LI FVKK ++ KA +L+++M K + Y +I G C +L A
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 226 QLYSEMKGSGITPDFEILSKLITSCSDEGELTLLVKEIWEDRDVNTMTLLCNSIMRILVS 285
Q+ M P+ + LI + K + R+++ L+ N++ +
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVD---KGMELFREMSQRGLVGNTVTYTTLI 435
Query: 286 NGSIDQAYNLLQAMIKGEPIADVGVEMLMIFKGTVSPNTSSFDIIINTLLKDGKLDLALS 345
+G QA + A + + + VGV PN +++I+++ L K+GKL A+
Sbjct: 436 HGFF-QARDCDNAQMVFKQMVSVGVH----------PNILTYNILLDGLCKNGKLAKAMV 484
Query: 346 LFREMTQIGCMQNVFLYNNLIDGLCNSNR 374
+F + + +++ YN +I+G+C + +
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 4/222 (1%)
Query: 36 LIRCLGSVGLVEEAN-MLFDQVKREGLCVPNNYSYNCLLEALCKSCSVDLVEMRLKEMQD 94
LI CL + G +A+ +L D ++R+ PN +++ L++A K + E +EM
Sbjct: 294 LISCLCNYGRWSDASRLLSDMIERK--INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK 351
Query: 95 YGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVDEHV-FSILLVAFSKWGEVDK 153
+ +T + L+ +C + +A + +I + V ++ L+ F K VDK
Sbjct: 352 RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDK 411
Query: 154 ACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLFDKMTKSGFASDAAMYDVIIG 213
EL M + N T+ LIHGF + D A +F +M G + Y++++
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 471
Query: 214 GLCKNKQLEMALQLYSEMKGSGITPDFEILSKLITSCSDEGE 255
GLCKN +L A+ ++ ++ S + PD + +I G+
Sbjct: 472 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 102/211 (48%), Gaps = 6/211 (2%)
Query: 17 LAQDVVKSRCFMSPGALGF--LIRCLGSVGLVEEANMLFDQVKREGLCVPNNYSYNCLLE 74
L D+++ + ++P + F LI G + +A L++++ + + PN ++Y+ L+
Sbjct: 310 LLSDMIERK--INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI-DPNIFTYSSLIN 366
Query: 75 ALCKSCSVDLVEMRLKEMQDYGWGYDKYTLTPLLQVYCNSGQFDKALSVFNEIIDHGWVD 134
C + + L+ M + T L+ +C + + DK + +F E+ G V
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 135 EHV-FSILLVAFSKWGEVDKACELIERMDDCNIRLNEKTFCVLIHGFVKKSRVDKALQLF 193
V ++ L+ F + + D A + ++M + N T+ +L+ G K ++ KA+ +F
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 194 DKMTKSGFASDAAMYDVIIGGLCKNKQLEMA 224
+ + +S D Y+++I G+CK + +M
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,989,294
Number of Sequences: 539616
Number of extensions: 9770383
Number of successful extensions: 43799
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 429
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 28858
Number of HSP's gapped (non-prelim): 3718
length of query: 666
length of database: 191,569,459
effective HSP length: 124
effective length of query: 542
effective length of database: 124,657,075
effective search space: 67564134650
effective search space used: 67564134650
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 65 (29.6 bits)