Query 038607
Match_columns 181
No_of_seqs 136 out of 1227
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 12:45:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038607.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038607hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 99.9 1.3E-21 2.9E-26 163.2 12.2 120 43-163 25-145 (489)
2 PLN02687 flavonoid 3'-monooxyg 99.8 1.4E-18 3E-23 146.9 12.6 110 41-152 31-141 (517)
3 PLN02971 tryptophan N-hydroxyl 99.7 2.5E-17 5.3E-22 140.1 10.9 110 43-153 56-167 (543)
4 PLN00168 Cytochrome P450; Prov 99.7 9.6E-17 2.1E-21 135.7 12.9 111 41-152 32-145 (519)
5 PLN02183 ferulate 5-hydroxylas 99.7 2E-16 4.3E-21 133.7 12.1 106 43-151 35-142 (516)
6 PLN00110 flavonoid 3',5'-hydro 99.7 3.4E-16 7.3E-21 132.0 13.0 105 41-148 28-133 (504)
7 PTZ00404 cytochrome P450; Prov 99.7 1E-16 2.2E-21 134.3 9.6 110 40-154 26-135 (482)
8 PLN02500 cytochrome P450 90B1 99.7 1.2E-16 2.5E-21 134.3 8.1 110 41-153 35-147 (490)
9 PLN03112 cytochrome P450 famil 99.7 5.7E-16 1.2E-20 130.8 12.2 108 41-151 29-138 (514)
10 PLN02196 abscisic acid 8'-hydr 99.7 3.9E-16 8.5E-21 130.3 9.9 105 44-152 35-139 (463)
11 PLN02394 trans-cinnamate 4-mon 99.7 2.1E-15 4.5E-20 127.0 13.6 106 44-151 30-137 (503)
12 PLN03234 cytochrome P450 83B1; 99.7 1.5E-15 3.3E-20 127.8 12.6 108 43-151 27-135 (499)
13 PLN02290 cytokinin trans-hydro 99.7 6.3E-16 1.4E-20 130.6 10.0 110 41-153 40-166 (516)
14 PLN02774 brassinosteroid-6-oxi 99.7 2.1E-16 4.5E-21 132.0 6.9 107 41-152 28-134 (463)
15 PLN02655 ent-kaurene oxidase 99.6 4.2E-16 9.2E-21 130.2 8.7 105 46-151 1-105 (466)
16 PLN03018 homomethionine N-hydr 99.6 1.4E-15 3.1E-20 129.0 10.7 111 44-154 40-151 (534)
17 PLN02987 Cytochrome P450, fami 99.6 1.2E-15 2.5E-20 127.8 8.5 105 41-148 27-134 (472)
18 PLN02966 cytochrome P450 83A1 99.6 4.2E-15 9.1E-20 125.3 9.6 110 42-152 27-137 (502)
19 KOG0158 Cytochrome P450 CYP3/C 99.6 6.5E-15 1.4E-19 122.6 9.6 115 39-155 27-142 (499)
20 PLN03141 3-epi-6-deoxocathaste 99.6 5.4E-15 1.2E-19 123.1 7.1 112 40-154 3-117 (452)
21 PLN02302 ent-kaurenoic acid ox 99.6 4.5E-14 9.8E-19 118.4 12.2 109 41-153 39-152 (490)
22 KOG0157 Cytochrome P450 CYP4/C 99.6 2.9E-14 6.4E-19 120.1 10.7 109 42-154 33-144 (497)
23 PF00067 p450: Cytochrome P450 99.5 1.9E-14 4E-19 118.0 3.4 107 46-153 1-109 (463)
24 PLN02169 fatty acid (omega-1)- 99.4 9.3E-13 2E-17 111.1 10.4 112 41-156 29-144 (500)
25 PLN03195 fatty acid omega-hydr 99.4 1.6E-12 3.6E-17 109.9 10.1 102 44-152 31-136 (516)
26 PLN02936 epsilon-ring hydroxyl 99.3 3.8E-12 8.3E-17 107.1 7.9 109 41-152 9-120 (489)
27 PLN02648 allene oxide synthase 99.1 1.3E-11 2.8E-16 103.7 1.8 115 45-163 18-152 (480)
28 PLN02738 carotene beta-ring hy 99.1 1.3E-10 2.8E-15 100.6 7.8 95 55-153 142-236 (633)
29 KOG0159 Cytochrome P450 CYP11/ 98.9 2.2E-09 4.7E-14 89.1 5.0 112 45-159 52-170 (519)
30 PLN02426 cytochrome P450, fami 98.9 3.7E-08 8E-13 83.4 11.6 95 52-153 49-145 (502)
31 KOG0684 Cytochrome P450 [Secon 98.8 3.9E-08 8.5E-13 80.3 9.0 103 45-150 33-135 (486)
32 COG2124 CypX Cytochrome P450 [ 96.8 0.0025 5.4E-08 52.8 5.5 81 69-153 26-113 (411)
33 PF08247 ENOD40: ENOD40 protei 66.5 1.9 4.2E-05 16.8 0.0 9 169-177 4-12 (12)
34 KOG3653 Transforming growth fa 57.0 66 0.0014 27.6 7.3 46 67-112 211-257 (534)
35 PF00220 Hormone_4: Neurohypop 44.4 11 0.00024 13.5 0.5 7 170-176 3-9 (9)
36 PF15330 SIT: SHP2-interacting 42.2 89 0.0019 20.9 4.9 14 48-61 42-55 (107)
37 PF13625 Helicase_C_3: Helicas 38.7 87 0.0019 21.3 4.7 40 65-106 74-113 (129)
38 PRK02302 hypothetical protein; 33.4 1.4E+02 0.003 19.4 5.0 33 74-106 22-54 (89)
39 COG4471 Uncharacterized protei 32.8 1.4E+02 0.003 19.3 5.0 34 73-106 20-53 (90)
40 PF11671 Apis_Csd: Complementa 31.0 34 0.00073 23.7 1.5 22 146-167 100-121 (146)
41 KOG0114 Predicted RNA-binding 29.5 1.8E+02 0.0039 19.6 6.1 60 43-106 11-76 (124)
42 PF15050 SCIMP: SCIMP protein 28.0 1.5E+02 0.0032 20.4 4.2 11 48-58 73-83 (133)
43 PRK02886 hypothetical protein; 27.8 1.7E+02 0.0037 18.8 5.0 33 74-106 20-52 (87)
44 KOG0107 Alternative splicing f 25.4 1.9E+02 0.004 21.4 4.6 50 52-105 12-65 (195)
45 TIGR01661 ELAV_HUD_SF ELAV/HuD 24.2 2.8E+02 0.0061 22.1 6.1 50 53-106 272-330 (352)
46 PLN03134 glycine-rich RNA-bind 24.2 2.6E+02 0.0055 19.5 6.3 50 53-106 37-95 (144)
47 PF13893 RRM_5: RNA recognitio 20.7 1.7E+02 0.0036 16.2 4.2 34 72-105 2-39 (56)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.87 E-value=1.3e-21 Score=163.24 Aligned_cols=120 Identities=33% Similarity=0.581 Sum_probs=105.2
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc-hhHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLAME 121 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-~~~~~ 121 (181)
+++||+|.++|++||++++.. ..++..+.+++++||+++.+++|..++||++|+++++|+++++...|++|+. .....
T Consensus 25 ~~lPPGP~~lPiIGnl~~l~~-~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~ 103 (489)
T KOG0156|consen 25 RNLPPGPPPLPIIGNLHQLGS-LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK 103 (489)
T ss_pred CCCCcCCCCCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence 778888889999999999984 2599999999999999999999999999999999999999999999999987 23445
Q ss_pred HhhcCCcceEeCCCCchHHHHhhhhcccCCCCCCCCceeecc
Q 038607 122 IFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPVPIPDILHIS 163 (181)
Q Consensus 122 ~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~~~~~~~~~~ 163 (181)
.+..++.|++++.+|+.||++||+.....-......++.++.
T Consensus 104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R 145 (489)
T KOG0156|consen 104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIR 145 (489)
T ss_pred HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHH
Confidence 566677899999779999999999998888877777776654
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.79 E-value=1.4e-18 Score=146.88 Aligned_cols=110 Identities=33% Similarity=0.625 Sum_probs=87.8
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+..++|++|.++|++||+.++. .+++..+.++.++||+++++++|+.++++++||++++++++++...|.+++.....
T Consensus 31 ~~~~~pPgp~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~ 108 (517)
T PLN02687 31 HKRPLPPGPRGWPVLGNLPQLG--PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGA 108 (517)
T ss_pred CCCCCCccCCCCCccccHHhcC--CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccch
Confidence 3345676777899999998886 56889999999999999999999999999999999999999888888877654433
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhc-ccCCC
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGG-EGTDI 152 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~-pa~~~ 152 (181)
..++..+.+++++.+|+.|+++||+++ ++++.
T Consensus 109 ~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~ 141 (517)
T PLN02687 109 EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSA 141 (517)
T ss_pred hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCH
Confidence 333332345555545999999999998 77653
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=99.73 E-value=2.5e-17 Score=140.07 Aligned_cols=110 Identities=20% Similarity=0.287 Sum_probs=84.6
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAME 121 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~ 121 (181)
.++||+|.++|++||++++......+..+.++.++|| +++++++|+.++++++||+++++++.++...|.+|+......
T Consensus 56 ~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~ 135 (543)
T PLN02971 56 HPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQK 135 (543)
T ss_pred CCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchh
Confidence 3567777789999999887531234678899999999 799999999999999999999999999888898887544333
Q ss_pred HhhcCCc-ceEeCCCCchHHHHhhhhcccCCCC
Q 038607 122 IFGYNFS-MFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 122 ~~~~~~~-gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
.++.+.. +++..+ |+.||++||++++.+..+
T Consensus 136 ~l~~~~~~~l~~~~-G~~Wk~~Rk~l~~~l~~~ 167 (543)
T PLN02971 136 ILSNGYKTCVITPF-GEQFKKMRKVIMTEIVCP 167 (543)
T ss_pred hccCCCCceEecCC-cHHHHHHHHHHHHHhccH
Confidence 3442212 344455 999999999998665433
No 4
>PLN00168 Cytochrome P450; Provisional
Probab=99.72 E-value=9.6e-17 Score=135.75 Aligned_cols=111 Identities=23% Similarity=0.391 Sum_probs=85.4
Q ss_pred ccCCCCCCCCCcceeeecccCCC-CCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGG-PEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA 119 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~ 119 (181)
+..++|++|.++|++||+..+.. ..+++..+.++.++||++|++++|+.+.++++||+++++++.++...|++++....
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~ 111 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS 111 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence 34456766668999999976641 14578899999999999999999999999999999999999988888887765443
Q ss_pred HHHhhcCCcceEe-CCCCchHHHHhh-hhcccCCC
Q 038607 120 MEIFGYNFSMFGF-SPYGSYWRMAMG-RGGEGTDI 152 (181)
Q Consensus 120 ~~~~~~~~~gl~~-~~~g~~Wk~~Rr-~l~pa~~~ 152 (181)
...++.+ .+++. ..+|+.|+++|| +++++++-
T Consensus 112 ~~~~~~~-~~~~~~~~~G~~Wk~~Rr~~~~~~fs~ 145 (519)
T PLN00168 112 SRLLGES-DNTITRSSYGPVWRLLRRNLVAETLHP 145 (519)
T ss_pred hhhhccC-CCceeCCCCCHHHHHHHHHHHHhccCH
Confidence 3344433 34444 234999999987 78888764
No 5
>PLN02183 ferulate 5-hydroxylase
Probab=99.69 E-value=2e-16 Score=133.75 Aligned_cols=106 Identities=25% Similarity=0.432 Sum_probs=82.7
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
.++|++|.++|++|++.++. ...+..+.++.++||++|++++++.++++++||+++++++.++...|+.++.......
T Consensus 35 ~~~ppgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~ 112 (516)
T PLN02183 35 LPYPPGPKGLPIIGNMLMMD--QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISY 112 (516)
T ss_pred CCCCcCCCCCCeeccHHhcC--CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhc
Confidence 35666667899999998775 4567789999999999999999999999999999999999988888877765432222
Q ss_pred hhc-CCcceEeCCCCchHHHHhhh-hcccCC
Q 038607 123 FGY-NFSMFGFSPYGSYWRMAMGR-GGEGTD 151 (181)
Q Consensus 123 ~~~-~~~gl~~~~~g~~Wk~~Rr~-l~pa~~ 151 (181)
+.. .+.+++..+ |+.|+++||+ ++++++
T Consensus 113 ~~~~~~~~l~~~~-g~~w~~~Rr~~~~~~f~ 142 (516)
T PLN02183 113 LTYDRADMAFAHY-GPFWRQMRKLCVMKLFS 142 (516)
T ss_pred cccCCCceEeCCC-ChHHHHHHHHHHHHhcC
Confidence 222 234565566 9999999998 467765
No 6
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.69 E-value=3.4e-16 Score=132.03 Aligned_cols=105 Identities=31% Similarity=0.485 Sum_probs=83.9
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+..++|++|.++|++||++.+. ..++..+.++.++||+++++++|+.+.++++||+++++++.++...|.+++.....
T Consensus 28 ~~~~~pPgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~ 105 (504)
T PLN00110 28 PSRKLPPGPRGWPLLGALPLLG--NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA 105 (504)
T ss_pred ccCCCcccCCCCCeeechhhcC--CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence 4556677777899999998775 56889999999999999999999999999999999999999888888877654322
Q ss_pred H-HhhcCCcceEeCCCCchHHHHhhhhcc
Q 038607 121 E-IFGYNFSMFGFSPYGSYWRMAMGRGGE 148 (181)
Q Consensus 121 ~-~~~~~~~gl~~~~~g~~Wk~~Rr~l~p 148 (181)
. .....+.+++..+ |+.|+++||++++
T Consensus 106 ~~~~~~~~~~l~~~~-g~~w~~~Rr~~~~ 133 (504)
T PLN00110 106 THLAYGAQDMVFADY-GPRWKLLRKLSNL 133 (504)
T ss_pred hhhccCCCceeeCCC-CHHHHHHHHHHHH
Confidence 2 2222224555555 9999999999986
No 7
>PTZ00404 cytochrome P450; Provisional
Probab=99.69 E-value=1e-16 Score=134.33 Aligned_cols=110 Identities=26% Similarity=0.342 Sum_probs=87.1
Q ss_pred cccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhH
Q 038607 40 KKKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA 119 (181)
Q Consensus 40 ~~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~ 119 (181)
.+...+|+|+ ++|++||+..+. .+++..+.++.++||+++++++++.+.++++||+++++++.++...|..++....
T Consensus 26 ~~~~~~pgp~-~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~ 102 (482)
T PTZ00404 26 IHKNELKGPI-PIPILGNLHQLG--NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPS 102 (482)
T ss_pred ccCCCCCCCC-CCCeeccHhhhc--ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcce
Confidence 3445556554 799999998886 5789999999999999999999999999999999999999877777766654332
Q ss_pred HHHhhcCCcceEeCCCCchHHHHhhhhcccCCCCC
Q 038607 120 MEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPV 154 (181)
Q Consensus 120 ~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~ 154 (181)
..... .+.|++.++ |+.|+++||+++++++.++
T Consensus 103 ~~~~~-~~~~l~~~~-g~~w~~~Rk~~~~~f~~~~ 135 (482)
T PTZ00404 103 IKHGT-FYHGIVTSS-GEYWKRNREIVGKAMRKTN 135 (482)
T ss_pred eeeec-cCCceeccC-hHHHHHHHHHHHHHHhhhc
Confidence 21111 247888887 9999999999999986543
No 8
>PLN02500 cytochrome P450 90B1
Probab=99.67 E-value=1.2e-16 Score=134.29 Aligned_cols=110 Identities=13% Similarity=0.086 Sum_probs=84.3
Q ss_pred ccCCCCCCCCCcceeeecccCC-C--CCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCch
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLG-G--PEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT 117 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~-~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~ 117 (181)
+..++|++|.++|++||+..+. . ...++..+.++.++||+++++++|++++++++||++++++++++...|.++...
T Consensus 35 ~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~ 114 (490)
T PLN02500 35 KRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPR 114 (490)
T ss_pred CCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCch
Confidence 4446677777899999976432 1 135778899999999999999999999999999999999999877777544322
Q ss_pred hHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 118 LAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 118 ~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
.....++ +.++++++ |+.||++||+++++++-.
T Consensus 115 ~~~~~~g--~~~~~~~~-g~~wr~~Rk~~~~~f~~~ 147 (490)
T PLN02500 115 SIGGILG--KWSMLVLV-GDMHRDMRSISLNFLSHA 147 (490)
T ss_pred HHHHHhC--cccccccC-CHHHHHHHHHHHHhcChH
Confidence 2223333 24788887 999999999999887643
No 9
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.67 E-value=5.7e-16 Score=130.80 Aligned_cols=108 Identities=31% Similarity=0.423 Sum_probs=82.7
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+..+.|++|.++|++||+.++. .+++..+.++.++||+++++++++.+.++++||+++++++.++...|.+++.....
T Consensus 29 ~~~~~ppgp~~~pl~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~ 106 (514)
T PLN03112 29 KSLRLPPGPPRWPIVGNLLQLG--PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAA 106 (514)
T ss_pred CCCCCccCCCCCCeeeeHHhcC--CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccc
Confidence 4445666667899999998876 56888999999999999999999999999999999999999888888877654222
Q ss_pred HH-hhcCCcceEeCCCCchHHHHhhhhc-ccCC
Q 038607 121 EI-FGYNFSMFGFSPYGSYWRMAMGRGG-EGTD 151 (181)
Q Consensus 121 ~~-~~~~~~gl~~~~~g~~Wk~~Rr~l~-pa~~ 151 (181)
.. ....+.+++.++ |+.|+++||++. ++++
T Consensus 107 ~~~~~g~~~~~~~~~-g~~wk~~Rr~~~~~~f~ 138 (514)
T PLN03112 107 VHLAYGCGDVALAPL-GPHWKRMRRICMEHLLT 138 (514)
T ss_pred eeeccCCCceEeCCC-CHHHHHHHHHHHHHhcC
Confidence 11 111223444455 999999999965 4443
No 10
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.66 E-value=3.9e-16 Score=130.33 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=81.2
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF 123 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~ 123 (181)
+.|++|.++|++||+.++.. .+++..+.++.++||+++++++++.+.++++||+++++++.++...|... ........
T Consensus 35 ~~Ppgp~~~P~iG~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~-~~~~~~~~ 112 (463)
T PLN02196 35 PLPPGTMGWPYVGETFQLYS-QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPT-FPASKERM 112 (463)
T ss_pred CCCCCCCCCCccchHHHHHh-cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCccccc-CchHHHHH
Confidence 34555557999999887643 67899999999999999999999999999999999999998777666322 11122222
Q ss_pred hcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 124 GYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 124 ~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.++.++++++ |+.|+++||++++.++-
T Consensus 113 -~g~~~l~~~~-g~~w~~~Rk~l~~~f~~ 139 (463)
T PLN02196 113 -LGKQAIFFHQ-GDYHAKLRKLVLRAFMP 139 (463)
T ss_pred -cCcccccccC-cHHHHHHHHHHHHhcCh
Confidence 2334787877 99999999999988763
No 11
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.66 E-value=2.1e-15 Score=127.04 Aligned_cols=106 Identities=32% Similarity=0.442 Sum_probs=80.9
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF 123 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~ 123 (181)
+.|++|.+.|++|++.++.. ...+..+.++.++||+++++++++.+.|+++||+.+++++.++...|.+++.......+
T Consensus 30 ~~pPgp~~~p~~g~l~~~~~-~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~~ 108 (503)
T PLN02394 30 KLPPGPAAVPIFGNWLQVGD-DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIF 108 (503)
T ss_pred CCCcCCCCCCeeeeHHhcCC-CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhHh
Confidence 34555558999999988763 33578899999999999999999999999999999999998877777766543333333
Q ss_pred -hcCCcceEeCCCCchHHHHhhhhc-ccCC
Q 038607 124 -GYNFSMFGFSPYGSYWRMAMGRGG-EGTD 151 (181)
Q Consensus 124 -~~~~~gl~~~~~g~~Wk~~Rr~l~-pa~~ 151 (181)
+.++++++..+ |++|+++||+++ +.++
T Consensus 109 ~g~~~~~l~~~~-g~~w~~~Rk~~~~~~f~ 137 (503)
T PLN02394 109 TGKGQDMVFTVY-GDHWRKMRRIMTVPFFT 137 (503)
T ss_pred ccCCCceeecCC-CHHHHHHHHHHHHHhcC
Confidence 32323455555 999999999997 6654
No 12
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.65 E-value=1.5e-15 Score=127.78 Aligned_cols=108 Identities=31% Similarity=0.459 Sum_probs=83.2
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
.+.|++|.++|++||+.++.. .+++..+.+++++||+++++++|+.++++++||+++++++.++...|.+++.......
T Consensus 27 ~~~pPgp~~~P~iG~~~~~~~-~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~~ 105 (499)
T PLN03234 27 LRLPPGPKGLPIIGNLHQMEK-FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQT 105 (499)
T ss_pred CCCCcCCCCCCeeccHHhcCC-CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhhh
Confidence 345555568999999988853 3677889999999999999999999999999999999999988888887765433333
Q ss_pred hhcCCcceEeCCCCchHHHHhhhh-cccCC
Q 038607 123 FGYNFSMFGFSPYGSYWRMAMGRG-GEGTD 151 (181)
Q Consensus 123 ~~~~~~gl~~~~~g~~Wk~~Rr~l-~pa~~ 151 (181)
....+.++....+++.|+++||.+ +++++
T Consensus 106 ~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~ 135 (499)
T PLN03234 106 MSYQGRELGFGQYTAYYREMRKMCMVNLFS 135 (499)
T ss_pred hccCCCccccCCCcHHHHHHHHHHHHHhcC
Confidence 222234444555589999999985 56665
No 13
>PLN02290 cytokinin trans-hydroxylase
Probab=99.65 E-value=6.3e-16 Score=130.59 Aligned_cols=110 Identities=14% Similarity=0.075 Sum_probs=79.6
Q ss_pred ccCCCCCCCCCcceeeecccCCC-----------------CCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGG-----------------PEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKEC 103 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~-----------------~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~v 103 (181)
+.+++|+| .++|++||++++.. .......+.+|.++||+++.+++|+.+.++++||++++++
T Consensus 40 ~~~~~PGP-~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~i 118 (516)
T PLN02290 40 ERQGVRGP-KPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKEL 118 (516)
T ss_pred HHcCCCCC-CCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHH
Confidence 34455554 58999999987641 0123345788999999999999999999999999999999
Q ss_pred HhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 104 LTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 104 l~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
+.++ ..+.+++...........|+|++.++ |+.||++||+++++++.+
T Consensus 119 l~~~-~~~~~r~~~~~~~~~~~~g~~l~~~~-g~~Wk~~Rk~~~~~f~~~ 166 (516)
T PLN02290 119 LTKY-NTVTGKSWLQQQGTKHFIGRGLLMAN-GADWYHQRHIAAPAFMGD 166 (516)
T ss_pred HhcC-CCCCCCcchhhhHHHHHhcCCccccC-chHHHHHHhhcccccCHH
Confidence 9876 34444543221111111236888887 999999999999997643
No 14
>PLN02774 brassinosteroid-6-oxidase
Probab=99.65 E-value=2.1e-16 Score=131.96 Aligned_cols=107 Identities=16% Similarity=0.144 Sum_probs=83.3
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+.++.|++|.++|++||+..+. .++...+.++.++||+++++++++++.++++||+++++++.++...|..+......
T Consensus 28 ~r~~~ppgp~~~P~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~ 105 (463)
T PLN02774 28 SKKGLPPGTMGWPLFGETTEFL--KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSML 105 (463)
T ss_pred CCCCCCCCCCCCCchhhHHHHH--HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHH
Confidence 4446666666899999988775 45677899999999999999999999999999999999998777666433222222
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
..++ +.+++.++ |+.|+++|++++++++-
T Consensus 106 ~~lg--~~~~~~~~-g~~w~~~R~~l~~~~~~ 134 (463)
T PLN02774 106 DILG--TCNIAAVH-GSTHRYMRGSLLSLISP 134 (463)
T ss_pred HHhC--ccchhhcC-CHHHHHHHHHHHHhcCH
Confidence 3333 24677776 99999999999887654
No 15
>PLN02655 ent-kaurene oxidase
Probab=99.65 E-value=4.2e-16 Score=130.21 Aligned_cols=105 Identities=28% Similarity=0.393 Sum_probs=84.0
Q ss_pred CCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhc
Q 038607 46 PEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGY 125 (181)
Q Consensus 46 P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~ 125 (181)
|++|.++|++||++++.. .+++..+.+++++||++|+++++++++++++||+++++++.++...|.+++.......++.
T Consensus 1 ppgp~~lP~iG~l~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~ 79 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKE-KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTR 79 (466)
T ss_pred CcCCCCCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhc
Confidence 345558999999998864 4688999999999999999999999999999999999999998888987764433333443
Q ss_pred CCcceEeCCCCchHHHHhhhhcccCC
Q 038607 126 NFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 126 ~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
++.+++.+++|+.|+++||++.+.+.
T Consensus 80 ~~~~~~~~~~g~~wr~~Rr~~~~~~~ 105 (466)
T PLN02655 80 DKSMVATSDYGDFHKMVKRYVMNNLL 105 (466)
T ss_pred CCCceeeCCCcHHHHHHHHHHHHHhc
Confidence 33456666569999999998876653
No 16
>PLN03018 homomethionine N-hydroxylase
Probab=99.64 E-value=1.4e-15 Score=129.03 Aligned_cols=111 Identities=22% Similarity=0.315 Sum_probs=83.3
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhc-CCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKC-GPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
++||+|.++|++||++++.........+.+..++| |+++++++|++++|+++||++++++++++...|.+++.......
T Consensus 40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~ 119 (534)
T PLN03018 40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET 119 (534)
T ss_pred CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence 46777778999999988742111123455556655 79999999999999999999999999988888988875544444
Q ss_pred hhcCCcceEeCCCCchHHHHhhhhcccCCCCC
Q 038607 123 FGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPV 154 (181)
Q Consensus 123 ~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~ 154 (181)
++.++.+++++++|+.||++||++++++...+
T Consensus 120 l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~ 151 (534)
T PLN03018 120 IGDNYKSMGTSPYGEQFMKMKKVITTEIMSVK 151 (534)
T ss_pred hccCCCceEecCCCHHHHHHHHHHHHHhcCHH
Confidence 44333467877669999999999998865443
No 17
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.62 E-value=1.2e-15 Score=127.85 Aligned_cols=105 Identities=14% Similarity=0.184 Sum_probs=83.5
Q ss_pred ccCCCCCCCCCcceeeecccCCC---CCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCch
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGG---PEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT 117 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~---~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~ 117 (181)
....+|++|.++|++||+.++.. ..++...+.++.++||+++++++++++.++++||+++++++.++...|.++...
T Consensus 27 ~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~ 106 (472)
T PLN02987 27 RRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPG 106 (472)
T ss_pred CCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcH
Confidence 33456777778999999987631 146888899999999999999999999999999999999999888888655333
Q ss_pred hHHHHhhcCCcceEeCCCCchHHHHhhhhcc
Q 038607 118 LAMEIFGYNFSMFGFSPYGSYWRMAMGRGGE 148 (181)
Q Consensus 118 ~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~p 148 (181)
.....++ ++|+++++ |+.||++||++++
T Consensus 107 ~~~~~lg--~~~l~~~~-g~~wr~~R~~~~~ 134 (472)
T PLN02987 107 SISNLLG--KHSLLLMK-GNLHKKMHSLTMS 134 (472)
T ss_pred HHHHHhC--cccccccC-cHHHHHHHHHHHH
Confidence 3333343 35888887 9999999999865
No 18
>PLN02966 cytochrome P450 83A1
Probab=99.60 E-value=4.2e-15 Score=125.29 Aligned_cols=110 Identities=29% Similarity=0.433 Sum_probs=83.7
Q ss_pred cCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHH
Q 038607 42 KRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAME 121 (181)
Q Consensus 42 ~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~ 121 (181)
..+.|++|.++|++||+.++.. .+++..+.+|.++||+++.+++++.+.++++||+++++++.++...|.+++......
T Consensus 27 ~~~~ppgp~~~p~~G~l~~l~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~ 105 (502)
T PLN02966 27 RYKLPPGPSPLPVIGNLLQLQK-LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE 105 (502)
T ss_pred CCCCCcCCCCCCeeccHHhcCC-CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence 3456666668999999988743 468889999999999999999999999999999999999988777777665432222
Q ss_pred HhhcCCcceEeCCCCchHHHHhhh-hcccCCC
Q 038607 122 IFGYNFSMFGFSPYGSYWRMAMGR-GGEGTDI 152 (181)
Q Consensus 122 ~~~~~~~gl~~~~~g~~Wk~~Rr~-l~pa~~~ 152 (181)
....+.+++....+|+.|+++||+ ++++++.
T Consensus 106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~ 137 (502)
T PLN02966 106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSP 137 (502)
T ss_pred eeccCcceeeeCCCCHHHHHHHHHHHHHhcCH
Confidence 222222334444449999999999 7777764
No 19
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.59 E-value=6.5e-15 Score=122.61 Aligned_cols=115 Identities=22% Similarity=0.197 Sum_probs=87.2
Q ss_pred hcccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh
Q 038607 39 IKKKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL 118 (181)
Q Consensus 39 ~~~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~ 118 (181)
++..+++|+++ ++|++||+..+...+.......+...++|+++.++.+.+|.+++.||+.+++|+++++++|.++....
T Consensus 27 yw~rrGi~~~~-p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~ 105 (499)
T KOG0158|consen 27 YWRRRGIPGPK-PLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPI 105 (499)
T ss_pred hhccCCCCCCC-CCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCC
Confidence 44566888876 68999999888533334555555555559999999999999999999999999999999998853111
Q ss_pred HHHHh-hcCCcceEeCCCCchHHHHhhhhcccCCCCCC
Q 038607 119 AMEIF-GYNFSMFGFSPYGSYWRMAMGRGGEGTDIPVP 155 (181)
Q Consensus 119 ~~~~~-~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~~ 155 (181)
..... .....+++++. |++||+.|..++|+++..+.
T Consensus 106 ~~d~~~~l~~~~Lf~~~-g~~WK~lR~~lsP~Fts~km 142 (499)
T KOG0158|consen 106 YGDPEDPLSALNLFFLR-GERWKRLRTKLSPTFTSGKL 142 (499)
T ss_pred cCCCCCcccccCchhcc-CchHHHHHHhhccccchhhH
Confidence 11111 22236888888 99999999999999887654
No 20
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.56 E-value=5.4e-15 Score=123.09 Aligned_cols=112 Identities=23% Similarity=0.277 Sum_probs=88.1
Q ss_pred cccCCCCCCCCCcceeeecccCCC---CCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc
Q 038607 40 KKKRRAPEAGGAWPVTGHLHLLGG---PEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK 116 (181)
Q Consensus 40 ~~~~~~P~~p~~~p~~G~l~~~~~---~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~ 116 (181)
++.+++|++|.++|++||+.++.. ..+++.++.++.++||++|++++++.+.++++||+++++++.++...|..+..
T Consensus 3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~ 82 (452)
T PLN03141 3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP 82 (452)
T ss_pred CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence 355667777778999999988732 14688899999999999999999999999999999999999987777765532
Q ss_pred hhHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCCC
Q 038607 117 TLAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPV 154 (181)
Q Consensus 117 ~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~ 154 (181)
.......+ ..+++..+ |+.||++|+++++++..++
T Consensus 83 ~~~~~l~g--~~~~~~~~-g~~wr~~r~~~~~~~~~~~ 117 (452)
T PLN03141 83 KSLTELMG--KSSILLIN-GSLQRRVHGLIGAFLKSPH 117 (452)
T ss_pred hhHHHHhC--cccccccC-cHHHHHHHHHHHHhcCcHH
Confidence 22223332 24788887 9999999999998875443
No 21
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.56 E-value=4.5e-14 Score=118.42 Aligned_cols=109 Identities=18% Similarity=0.241 Sum_probs=81.1
Q ss_pred ccCCCCCCCCCcceeeecccCC---CCCChHHHHHHHHHhcCC--eeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCC
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLG---GPEPPHRVLGAMADKCGP--IFTIKMGINRALVVSNWEMAKECLTTHDKVFASRP 115 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~---~~~~~~~~~~~~~~~yG~--v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~ 115 (181)
...++|++|.++|++||++++. ...+++..+.++.++||+ ++++++++.+.++++||+++++++.++ ..|.++.
T Consensus 39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~ 117 (490)
T PLN02302 39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGW 117 (490)
T ss_pred CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCC
Confidence 3445677777899999988763 124688899999999997 789999999999999999999999754 4554443
Q ss_pred chhHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 116 KTLAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 116 ~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
.......++ ..+++..+ |+.|+++||++++++..+
T Consensus 118 ~~~~~~~~g--~~~~~~~~-g~~w~~~R~~~~~~f~~~ 152 (490)
T PLN02302 118 PESTVELIG--RKSFVGIT-GEEHKRLRRLTAAPVNGP 152 (490)
T ss_pred chhHHHHhc--cccccccC-cHHHHHHHHHHHhccCCH
Confidence 222222222 23455556 999999999999988543
No 22
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.55 E-value=2.9e-14 Score=120.09 Aligned_cols=109 Identities=21% Similarity=0.388 Sum_probs=86.7
Q ss_pred cCCCCCCCCCcceeeecccCCCC-CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-H
Q 038607 42 KRRAPEAGGAWPVTGHLHLLGGP-EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-A 119 (181)
Q Consensus 42 ~~~~P~~p~~~p~~G~l~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~ 119 (181)
....|++|.++|++|++.++... .+...++.++..+||++++.|+|+.+.++++||+.+++|+.++.......+.+. .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 34556666799999999988532 467778889999999999999999999999999999999976566554444333 2
Q ss_pred H-HHhhcCCcceEeCCCCchHHHHhhhhcccCCCCC
Q 038607 120 M-EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPV 154 (181)
Q Consensus 120 ~-~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~ 154 (181)
. ..+| .|+++++ |+.|+++||+++++++.+.
T Consensus 113 ~~~~lG---~gll~~~-g~~W~~~Rk~~~~~f~~~~ 144 (497)
T KOG0157|consen 113 LKPWLG---DGLLFSD-GEKWHKHRKLLTPAFHFEI 144 (497)
T ss_pred HHHHhc---CccccCC-chHHHHHHhhccHhhhHHH
Confidence 2 3333 6999999 9999999999999988554
No 23
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.48 E-value=1.9e-14 Score=117.96 Aligned_cols=107 Identities=29% Similarity=0.375 Sum_probs=87.0
Q ss_pred CCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH--h
Q 038607 46 PEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI--F 123 (181)
Q Consensus 46 P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~--~ 123 (181)
|++|.++|++||+.++....+++..+.++.++||++++++++++++++++||+++++++.++...+..++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 56667999999999886335788889999999999999999999999999999999999888777765533222221 1
Q ss_pred hcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 124 GYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 124 ~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
...+.+++.++ |+.|+++|+++++++..+
T Consensus 81 ~~~~~~l~~~~-~~~~~~~R~~~~~~~~~~ 109 (463)
T PF00067_consen 81 PFGGKGLFFSD-GERWRRQRRLLAPAFSSK 109 (463)
T ss_dssp HHTTTSSTTSS-HHHHHHHHHHHHHHHSHH
T ss_pred ccccccccccc-cccccccccccccccccc
Confidence 23457888888 899999999999988766
No 24
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.43 E-value=9.3e-13 Score=111.12 Aligned_cols=112 Identities=12% Similarity=-0.011 Sum_probs=81.9
Q ss_pred ccCCCCCCCCCcceeeecccCCC-CCChHHHHHHHHHhcCCeeE---EEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGG-PEPPHRVLGAMADKCGPIFT---IKMGINRALVVSNWEMAKECLTTHDKVFASRPK 116 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~-~~~~~~~~~~~~~~yG~v~~---~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~ 116 (181)
+.+++|+|+ ++|++||+..+.. .....+++.+...+||..+. .++|+.++++++||+++++|+.++...|.++..
T Consensus 29 ~~~~~p~p~-~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~ 107 (500)
T PLN02169 29 KPHGQPILK-NWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE 107 (500)
T ss_pred ccCCCCCCC-CCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH
Confidence 455788765 7999999976642 12344445555555886554 577889999999999999999988777876543
Q ss_pred hhHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCCCCC
Q 038607 117 TLAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPVPI 156 (181)
Q Consensus 117 ~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~~~ 156 (181)
.... ....|+|+++++ |+.||++||+++|+++..+..
T Consensus 108 ~~~~--~~~~g~gl~~~~-g~~Wr~~Rk~l~p~F~~~~~~ 144 (500)
T PLN02169 108 FKKI--FDVLGEGILTVD-FELWEDLRKSNHALFHNQDFI 144 (500)
T ss_pred HHHH--HHhhcCcccccC-cHHHHHHHHHHHHHhhhHHHH
Confidence 3221 122347999998 999999999999999887543
No 25
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.40 E-value=1.6e-12 Score=109.90 Aligned_cols=102 Identities=12% Similarity=0.046 Sum_probs=74.9
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhc---CCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-H
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKC---GPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-A 119 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~ 119 (181)
++|+| .++|++||++.+.. + +..+.+|.++| |+++.+++++.+.++++||+++++++.++...|.++.... .
T Consensus 31 ~~pgp-~~~p~~G~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~ 106 (516)
T PLN03195 31 NRKGP-KSWPIIGAALEQLK--N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY 106 (516)
T ss_pred ccCCC-CCCCeecchHHHHh--c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH
Confidence 34544 47999999876542 2 33466777777 7999999999999999999999999987655665443221 1
Q ss_pred HHHhhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 120 MEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 120 ~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
...+ .++|++..+ |+.|+++||+++++++.
T Consensus 107 ~~~~--~g~~l~~~~-g~~w~~~Rr~l~~~fs~ 136 (516)
T PLN03195 107 MEVL--LGDGIFNVD-GELWRKQRKTASFEFAS 136 (516)
T ss_pred HHHH--hcCeeeccC-cHHHHHHHHhcchhhhH
Confidence 1111 236888776 99999999999999864
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.33 E-value=3.8e-12 Score=107.11 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=86.6
Q ss_pred ccCCCCCCCCCcceeeecccCC---CCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCch
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLG---GPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT 117 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~ 117 (181)
....+-++..+||++|+..+.. .....+..+.+|.++||+++++++|+.+.++++||+++++++.+....|.++...
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~ 88 (489)
T PLN02936 9 SLNRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVA 88 (489)
T ss_pred hhhccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchh
Confidence 3456788889999999876552 1256888999999999999999999999999999999999998766777665433
Q ss_pred hHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 118 LAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 118 ~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
...... .+++++.++ |+.||++||+++++++.
T Consensus 89 ~~~~~~--~~~~i~~~~-g~~wk~~Rk~l~~~f~~ 120 (489)
T PLN02936 89 EVSEFL--FGSGFAIAE-GELWTARRRAVVPSLHR 120 (489)
T ss_pred hhhHHH--hcCccccCC-chHHHHHHHhhcCccCH
Confidence 222222 236888887 99999999999999864
No 27
>PLN02648 allene oxide synthase
Probab=99.14 E-value=1.3e-11 Score=103.69 Aligned_cols=115 Identities=10% Similarity=-0.036 Sum_probs=82.8
Q ss_pred CCCCCCCcceeeecccCCC---CCChHHHHHHHHHhcCC-eeEEEeCCeeE-------EEEeCHHHHHHHHhh----CCc
Q 038607 45 APEAGGAWPVTGHLHLLGG---PEPPHRVLGAMADKCGP-IFTIKMGINRA-------LVVSNWEMAKECLTT----HDK 109 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~~---~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------vvv~~p~~i~~vl~~----~~~ 109 (181)
.||++.++|++|++.++.. ..++..++.+..+|||+ ||+++++|.|+ ++++||++++.++.+ +..
T Consensus 18 ~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~~ 97 (480)
T PLN02648 18 EIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKRD 97 (480)
T ss_pred CCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccccc
Confidence 4667778999999976531 14567899999999998 99999998666 999999999999974 444
Q ss_pred ccCCCCchhHHHHhhcCCc---ceEeCCCCchHHHHhhhhcccCC--CCCCCCceeecc
Q 038607 110 VFASRPKTLAMEIFGYNFS---MFGFSPYGSYWRMAMGRGGEGTD--IPVPIPDILHIS 163 (181)
Q Consensus 110 ~f~~~~~~~~~~~~~~~~~---gl~~~~~g~~Wk~~Rr~l~pa~~--~~~~~~~~~~~~ 163 (181)
.+....+ .....+| ++ +++..+ |+.|+++||++.++++ +..+++.+..+.
T Consensus 98 ~~~~~~~-~~~~l~G--~~~~~s~~~~~-g~~H~r~Rrll~~~f~~~~~~~~~~m~~~~ 152 (480)
T PLN02648 98 VFTGTYM-PSTAFTG--GYRVLSYLDPS-EPKHAKLKSFLFELLKSRHRRFIPEFRAAF 152 (480)
T ss_pred cceeeec-cCccccC--CceeeeecCCC-CchHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 4443222 2223332 24 666666 9999999999998865 344556555554
No 28
>PLN02738 carotene beta-ring hydroxylase
Probab=99.14 E-value=1.3e-10 Score=100.63 Aligned_cols=95 Identities=20% Similarity=0.198 Sum_probs=73.7
Q ss_pred eeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCC
Q 038607 55 TGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSP 134 (181)
Q Consensus 55 ~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~ 134 (181)
.||+..+.+ ...+..+.++.++||+++++++|+.+.++++||+.+++++.++...|.++......... .+.|++..+
T Consensus 142 ~G~l~~i~~-g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~--~g~~l~~~d 218 (633)
T PLN02738 142 KGSISAVRG-EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFV--MGKGLIPAD 218 (633)
T ss_pred cCcHHHhcC-chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhc--cCCceecCC
Confidence 356555543 56788899999999999999999999999999999999998776667655332222221 236888777
Q ss_pred CCchHHHHhhhhcccCCCC
Q 038607 135 YGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 135 ~g~~Wk~~Rr~l~pa~~~~ 153 (181)
|+.||++|++++++++-.
T Consensus 219 -ge~wr~rRr~l~p~Fs~~ 236 (633)
T PLN02738 219 -GEIWRVRRRAIVPALHQK 236 (633)
T ss_pred -cHHHHHHHHhccHhhhHH
Confidence 999999999999998643
No 29
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.88 E-value=2.2e-09 Score=89.05 Aligned_cols=112 Identities=19% Similarity=0.224 Sum_probs=85.0
Q ss_pred CCCCCCCcceeeecccCC--CCCChHHHHHHHHHhcCCeeEEE-eCCeeEEEEeCHHHHHHHHhhCCcccCCCC-c---h
Q 038607 45 APEAGGAWPVTGHLHLLG--GPEPPHRVLGAMADKCGPIFTIK-MGINRALVVSNWEMAKECLTTHDKVFASRP-K---T 117 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~--~~~~~~~~~~~~~~~yG~v~~~~-~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~-~---~ 117 (181)
+|++ ..++++|.++.+. +..+.|+...+..++||+||+.. +|+...|.+.||++++.++.++. .+.-|+ . +
T Consensus 52 IP~p-~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~~~~w 129 (519)
T KOG0159|consen 52 IPGP-KGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLLIEPW 129 (519)
T ss_pred cCCC-CCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccccchh
Confidence 4544 5899999987432 23678999999999999999999 77789999999999999997644 334453 1 1
Q ss_pred hHHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCCCCCCce
Q 038607 118 LAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPVPIPDI 159 (181)
Q Consensus 118 ~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~~~~~~ 159 (181)
........+..|++..+ |++|.+.|..+++..+.|+-+..|
T Consensus 130 ~~~rd~~~~~~Gl~~~~-G~~W~~~Rs~ln~~ll~P~~v~~y 170 (519)
T KOG0159|consen 130 VAYRDFRGGVCGLFLLE-GPEWQRLRSALNPLLLQPQAVRRY 170 (519)
T ss_pred hhhHHhhccCCCcccCC-CHHHHHHHHHhchhhcCHHHHHHH
Confidence 22222333446999998 999999999999998887766554
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=98.85 E-value=3.7e-08 Score=83.38 Aligned_cols=95 Identities=9% Similarity=-0.088 Sum_probs=68.7
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-HHHHhhcCCcc
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-AMEIFGYNFSM 129 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~~~~~~~~~~g 129 (181)
.++.|+..... .+...++..+.++++ ..++++.++. ++++||+++++++.++...|.+..... ..... .|+|
T Consensus 49 ~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~--~g~g 122 (502)
T PLN02426 49 AYLTASWAKDF--DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL--LGRG 122 (502)
T ss_pred CCccHHHHHhc--ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh--cCCc
Confidence 45778876544 456777777888887 5777776554 889999999999988777776543322 11111 2379
Q ss_pred eEeCCCCchHHHHhhhhcccCCCC
Q 038607 130 FGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 130 l~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
+++++ |+.||++||+++++++.+
T Consensus 123 i~~~~-g~~wk~~Rk~l~~~fs~~ 145 (502)
T PLN02426 123 IFNVD-GDSWRFQRKMASLELGSV 145 (502)
T ss_pred eeecC-cHHHHHHHHHhHhhhhhH
Confidence 99887 999999999999988654
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.78 E-value=3.9e-08 Score=80.33 Aligned_cols=103 Identities=12% Similarity=-0.050 Sum_probs=77.8
Q ss_pred CCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhh
Q 038607 45 APEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFG 124 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~ 124 (181)
+|---..+|++|....+. .++..++++.++|||+||++.++|+.+.++.+|+....++....+.+..+........-.
T Consensus 33 PPli~gwiP~lG~a~~fg--k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~v 110 (486)
T KOG0684|consen 33 PPLIKGWIPWLGSALAFG--KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTPV 110 (486)
T ss_pred CcccccCcchhhHHHHhc--cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhhh
Confidence 333444679999999998 899999999999999999999999999999999999999977655554333221111112
Q ss_pred cCCcceEeCCCCchHHHHhhhhcccC
Q 038607 125 YNFSMFGFSPYGSYWRMAMGRGGEGT 150 (181)
Q Consensus 125 ~~~~gl~~~~~g~~Wk~~Rr~l~pa~ 150 (181)
.|.|+....++....++-+++..+.
T Consensus 111 -Fg~~v~~d~~~~~~~e~~~~~k~~L 135 (486)
T KOG0684|consen 111 -FGKGVVYDVPNHVMMEQKKFFKSAL 135 (486)
T ss_pred -cCCCccccCCCchHHHHHHHHHHHh
Confidence 2367777665788888888877664
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.82 E-value=0.0025 Score=52.85 Aligned_cols=81 Identities=16% Similarity=0.020 Sum_probs=53.1
Q ss_pred HHHHHHHHhcCCeeEEEeCCee--EEEEeCHHHHHHHHhhCCcccCCCCch---h--HHHHhhcCCcceEeCCCCchHHH
Q 038607 69 RVLGAMADKCGPIFTIKMGINR--ALVVSNWEMAKECLTTHDKVFASRPKT---L--AMEIFGYNFSMFGFSPYGSYWRM 141 (181)
Q Consensus 69 ~~~~~~~~~yG~v~~~~~~~~~--~vvv~~p~~i~~vl~~~~~~f~~~~~~---~--~~~~~~~~~~gl~~~~~g~~Wk~ 141 (181)
.......+.||.++.+...+.. .+++++++.+++++.++. .+.+.... . ..... +..+++..+ |+.|++
T Consensus 26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ll~~d-g~~H~r 101 (411)
T COG2124 26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVL--GDGSLLTLD-GPEHTR 101 (411)
T ss_pred hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhc--cccceeecC-CHHHHH
Confidence 3444566678888877765543 899999999999997653 12111111 1 11222 212377777 999999
Q ss_pred HhhhhcccCCCC
Q 038607 142 AMGRGGEGTDIP 153 (181)
Q Consensus 142 ~Rr~l~pa~~~~ 153 (181)
+||+++++|+-.
T Consensus 102 ~Rkl~~~~F~~~ 113 (411)
T COG2124 102 LRKLLAPAFTPR 113 (411)
T ss_pred HHHHhccccCHH
Confidence 999999998643
No 33
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=66.54 E-value=1.9 Score=16.79 Aligned_cols=9 Identities=33% Similarity=0.442 Sum_probs=7.4
Q ss_pred CccCcccCC
Q 038607 169 PHQNCLRGS 177 (181)
Q Consensus 169 ~~~~~~~~~ 177 (181)
.||++..||
T Consensus 4 ~wqksihgs 12 (12)
T PF08247_consen 4 CWQKSIHGS 12 (12)
T ss_pred eEeeeecCC
Confidence 589988886
No 34
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=56.96 E-value=66 Score=27.61 Aligned_cols=46 Identities=13% Similarity=0.267 Sum_probs=29.2
Q ss_pred hHHHHHHHHH-hcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccC
Q 038607 67 PHRVLGAMAD-KCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFA 112 (181)
Q Consensus 67 ~~~~~~~~~~-~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~ 112 (181)
+...+.-..+ +||.|++-.+-++.+.|-.-|..-++-+.+....|.
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~ 257 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS 257 (534)
T ss_pred chhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence 3344443333 688998888777777776666666666666555553
No 35
>PF00220 Hormone_4: Neurohypophysial hormones, N-terminal Domain; InterPro: IPR022423 Oxytocin (or ocytocin) and vasopressin [] are small (nine amino acid residues), structurally and functionally related neurohypophysial peptide hormones. Oxytocin causes contraction of the smooth muscle of the uterus and of the mammary gland while vasopressin has a direct antidiuretic action on the kidney and also causes vasoconstriction of the peripheral vessels. Like the majority of active peptides, both hormones are synthesized as larger protein precursors that are enzymatically converted to their mature forms. Peptides belonging to this family are also found in birds, fish, reptiles and amphibians (mesotocin, isotocin, valitocin, glumitocin, aspargtocin, vasotocin, seritocin, asvatocin, phasvatocin), in worms (annetocin), octopi (cephalotocin), locust (locupressin or neuropeptide F1/F2) and in molluscs (conopressins G and S) []. The pattern developed to detect this category of peptides spans their entire sequence and includes four invariant amino acid residues. .; GO: 0005185 neurohypophyseal hormone activity, 0005576 extracellular region
Probab=44.36 E-value=11 Score=13.54 Aligned_cols=7 Identities=43% Similarity=0.786 Sum_probs=4.7
Q ss_pred ccCcccC
Q 038607 170 HQNCLRG 176 (181)
Q Consensus 170 ~~~~~~~ 176 (181)
-|||-+|
T Consensus 3 i~nCP~G 9 (9)
T PF00220_consen 3 IRNCPIG 9 (9)
T ss_pred cccCCCC
Confidence 4788665
No 36
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=42.21 E-value=89 Score=20.89 Aligned_cols=14 Identities=29% Similarity=0.316 Sum_probs=9.5
Q ss_pred CCCCcceeeecccC
Q 038607 48 AGGAWPVTGHLHLL 61 (181)
Q Consensus 48 ~p~~~p~~G~l~~~ 61 (181)
+...-|+.||+...
T Consensus 42 ~~E~~p~YgNL~~~ 55 (107)
T PF15330_consen 42 PTEDDPCYGNLELQ 55 (107)
T ss_pred CCCCCccccccccc
Confidence 33467888998654
No 37
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=38.68 E-value=87 Score=21.32 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=30.3
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhh
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTT 106 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~ 106 (181)
.+....+.+|.++||.+.-. .+...+...|++.++++...
T Consensus 74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~~ 113 (129)
T PF13625_consen 74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLAD 113 (129)
T ss_pred HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHhC
Confidence 45667888999999986542 24667778899999999753
No 38
>PRK02302 hypothetical protein; Provisional
Probab=33.36 E-value=1.4e+02 Score=19.36 Aligned_cols=33 Identities=18% Similarity=0.064 Sum_probs=25.4
Q ss_pred HHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhh
Q 038607 74 MADKCGPIFTIKMGINRALVVSNWEMAKECLTT 106 (181)
Q Consensus 74 ~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~ 106 (181)
.-++||++..+.=-.+-.++-+|-+.++++..+
T Consensus 22 ~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k 54 (89)
T PRK02302 22 KLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE 54 (89)
T ss_pred HHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 345799998877555677788899989888764
No 39
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.81 E-value=1.4e+02 Score=19.28 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=26.2
Q ss_pred HHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhh
Q 038607 73 AMADKCGPIFTIKMGINRALVVSNWEMAKECLTT 106 (181)
Q Consensus 73 ~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~ 106 (181)
+.-++||++....--.+-.++-++-+.+++++.+
T Consensus 20 RqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k 53 (90)
T COG4471 20 RQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK 53 (90)
T ss_pred HHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence 4456799998877555667778888999998865
No 40
>PF11671 Apis_Csd: Complementary sex determiner protein; InterPro: IPR021007 Sex determination proteins are found in eukaryotes. Proteins in this family are typically between 168 and 410 amino acids in length. It plays a role in the gender determination of around 20% of all animals. In the honeybee, the mechanism of sex determination depends on the complementary sex determiner (csd) gene which produces an SR-type protein. Males are homozygous while females are homozygous for the csd gene. Heterozygosity generates an active protein which initiates female development []. This entry represents the C-terminal end of the sex determination protein.
Probab=31.04 E-value=34 Score=23.72 Aligned_cols=22 Identities=23% Similarity=0.366 Sum_probs=15.4
Q ss_pred hcccCCCCCCCCceeeccCCCC
Q 038607 146 GGEGTDIPVPIPDILHISPSPP 167 (181)
Q Consensus 146 l~pa~~~~~~~~~~~~~~~~~~ 167 (181)
+.|......-||.|.||.|+.|
T Consensus 100 v~pwv~~~~qvpr~r~igp~~p 121 (146)
T PF11671_consen 100 VGPWVSMQEQVPRFRYIGPLTP 121 (146)
T ss_pred ccCcccccccCCCccccCCCCC
Confidence 3455555667889999998653
No 41
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=29.51 E-value=1.8e+02 Score=19.60 Aligned_cols=60 Identities=18% Similarity=0.136 Sum_probs=41.2
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC------eeEEEEeCHHHHHHHHhh
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~------~~~vvv~~p~~i~~vl~~ 106 (181)
..+|+.-..+.++-|++. +-..+-+.+++-+||.|.++.+|. .-+||-.|-..++..+..
T Consensus 11 ~rlppevnriLyirNLp~----~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 11 IRLPPEVNRILYIRNLPF----KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCChhhheeEEEecCCc----cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 345555556777788753 234556778888999999999874 356776777777776643
No 42
>PF15050 SCIMP: SCIMP protein
Probab=27.96 E-value=1.5e+02 Score=20.35 Aligned_cols=11 Identities=9% Similarity=-0.025 Sum_probs=7.2
Q ss_pred CCCCcceeeec
Q 038607 48 AGGAWPVTGHL 58 (181)
Q Consensus 48 ~p~~~p~~G~l 58 (181)
||.+.++.|+.
T Consensus 73 PPRg~~s~~~~ 83 (133)
T PF15050_consen 73 PPRGSPSPEDS 83 (133)
T ss_pred CCCCCCCcccc
Confidence 66667766665
No 43
>PRK02886 hypothetical protein; Provisional
Probab=27.84 E-value=1.7e+02 Score=18.80 Aligned_cols=33 Identities=12% Similarity=0.248 Sum_probs=25.2
Q ss_pred HHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhh
Q 038607 74 MADKCGPIFTIKMGINRALVVSNWEMAKECLTT 106 (181)
Q Consensus 74 ~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~ 106 (181)
.-++||+|..+.=-..-.++-+|-+.+++++.+
T Consensus 20 ~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k 52 (87)
T PRK02886 20 QLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK 52 (87)
T ss_pred HHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence 345799998777555677778888889888764
No 44
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=25.40 E-value=1.9e+02 Score=21.45 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=33.4
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC----CeeEEEEeCHHHHHHHHh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG----INRALVVSNWEMAKECLT 105 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~i~~vl~ 105 (181)
--++|||..- --..-++..+.+||++..+|+. +.-+|-.-||..+++...
T Consensus 12 kVYVGnL~~~----a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~DAvr 65 (195)
T KOG0107|consen 12 KVYVGNLGSR----ATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAEDAVR 65 (195)
T ss_pred eEEeccCCCC----cchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHHHHHh
Confidence 4578887532 2334567778889999999963 345666677777766643
No 45
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=24.19 E-value=2.8e+02 Score=22.06 Aligned_cols=50 Identities=14% Similarity=0.173 Sum_probs=34.7
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCe---------eEEEEeCHHHHHHHHhh
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGIN---------RALVVSNWEMAKECLTT 106 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~---------~~vvv~~p~~i~~vl~~ 106 (181)
-++|||.. ..-.+.+.+.+.+||+|..+.+... -+|...+++.+...+..
T Consensus 272 lfV~NL~~----~~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~ 330 (352)
T TIGR01661 272 IFVYNLSP----DTDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILS 330 (352)
T ss_pred EEEeCCCC----CCCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 57788753 2345667788889999988776432 36667788887777653
No 46
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=24.17 E-value=2.6e+02 Score=19.52 Aligned_cols=50 Identities=12% Similarity=0.005 Sum_probs=35.0
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
-++||+..- -..+.+.++.++||.|..+.+. +.-+|-..+.+.++..+..
T Consensus 37 lfVgnL~~~----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 37 LFIGGLSWG----TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEEeCCCCC----CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 567776533 3466788888899998776652 2356667789999988853
No 47
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=20.72 E-value=1.7e+02 Score=16.16 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=23.1
Q ss_pred HHHHHhcCCeeEEEeCC----eeEEEEeCHHHHHHHHh
Q 038607 72 GAMADKCGPIFTIKMGI----NRALVVSNWEMAKECLT 105 (181)
Q Consensus 72 ~~~~~~yG~v~~~~~~~----~~~vvv~~p~~i~~vl~ 105 (181)
.+...+||+|-.+.+.. .-.|-..+.+.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 46678899998887643 34555668888877765
Done!