Query 038607
Match_columns 181
No_of_seqs 136 out of 1227
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 22:15:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038607.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038607hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 99.8 1.1E-18 3.7E-23 144.6 10.1 112 41-152 5-116 (494)
2 3tbg_A Cytochrome P450 2D6; mo 99.7 3E-18 1E-22 140.9 8.3 110 43-153 9-120 (479)
3 3pm0_A Cypib1, cytochrome P450 99.7 6.4E-17 2.2E-21 134.0 7.8 108 41-151 6-113 (507)
4 3nxu_A Cytochrome P450 3A4; al 99.6 9.9E-17 3.4E-21 132.3 6.0 105 41-152 12-117 (485)
5 3e6i_A CYPIIE1, P450-J, cytoch 99.6 2.7E-16 9.1E-21 129.3 8.1 107 41-151 7-113 (476)
6 3s79_A Cytochrome P450 19A1; o 99.6 1.7E-16 6E-21 131.4 5.7 108 44-153 45-155 (503)
7 3qz1_A Steroid 21-hydroxylase; 99.6 1.7E-16 5.7E-21 131.2 3.7 102 43-151 28-129 (496)
8 3ld6_A Lanosterol 14-alpha dem 99.6 6.3E-16 2.2E-20 127.1 4.9 106 44-152 12-117 (461)
9 2hi4_A Cytochrome P450 1A2; CY 99.6 2.4E-15 8.4E-20 124.7 6.3 102 47-151 19-121 (495)
10 1po5_A Cytochrome P450 2B4; ox 99.6 3.8E-15 1.3E-19 122.9 7.2 107 43-152 9-115 (476)
11 3gw9_A Sterol 14alpha-demethyl 99.6 1.7E-15 5.7E-20 123.6 4.8 106 44-153 4-110 (450)
12 2fdv_A Cytochrome P450 2A6; CY 99.6 6.2E-15 2.1E-19 121.6 7.8 105 44-151 10-114 (476)
13 3k9v_A 1,25-dihydroxyvitamin D 99.5 1.3E-15 4.5E-20 125.2 3.1 112 40-154 21-138 (482)
14 3czh_A Cytochrome P450 2R1; vi 99.5 5.8E-15 2E-19 122.1 6.5 108 42-151 10-119 (481)
15 3i3k_A Lanosterol 14-alpha dem 99.5 3.2E-15 1.1E-19 122.7 4.8 106 42-151 9-116 (461)
16 1r9o_A Cytochrome P450 2C9; mo 99.5 6.1E-15 2.1E-19 121.6 3.5 107 44-153 11-117 (477)
17 2ij2_A Cytochrome P450 BM3; mo 99.4 5E-13 1.7E-17 110.2 9.1 107 43-153 3-110 (470)
18 3v8d_A Cholesterol 7-alpha-mon 99.4 3.4E-14 1.2E-18 117.5 2.1 106 41-151 10-117 (491)
19 3dbg_A Putative cytochrome P45 99.4 6.9E-14 2.4E-18 115.0 3.3 104 43-153 22-126 (467)
20 2cib_A Cytochrome P450 51; hem 99.4 5.9E-13 2E-17 109.3 7.7 101 45-151 6-106 (455)
21 2ve3_A Putative cytochrome P45 99.4 1.6E-13 5.6E-18 112.3 4.1 102 44-151 12-113 (444)
22 2cd8_A Cytochrome P450 monooxy 99.3 3.8E-13 1.3E-17 110.2 3.4 103 44-152 26-133 (436)
23 3n9y_A Cholesterol SIDE-chain 99.3 2.4E-12 8.1E-17 106.1 6.4 108 40-151 6-120 (487)
24 3dax_A Cytochrome P450 7A1; ch 99.3 4.5E-13 1.5E-17 110.5 1.8 103 43-151 12-117 (491)
25 1n97_A CYP175A1; electron tran 99.2 5.3E-12 1.8E-16 101.7 2.5 93 51-151 6-99 (389)
26 3b6h_A Prostacyclin synthase; 99.2 1.2E-11 4E-16 102.3 4.3 96 42-142 16-113 (498)
27 1jfb_A Nitric-oxide reductase 99.1 5.3E-11 1.8E-15 96.2 6.3 101 45-152 2-108 (404)
28 1izo_A P450bsbeta, cytochrome 99.1 4.5E-11 1.5E-15 97.0 3.4 95 51-151 7-104 (417)
29 3b98_A Prostaglandin I2 syntha 99.1 3E-11 1E-15 99.2 1.5 93 43-141 17-111 (475)
30 1ued_A P450 OXYC, P450 monooxy 99.0 1.9E-10 6.5E-15 93.2 5.8 100 42-152 8-118 (406)
31 3mdm_A Cholesterol 24-hydroxyl 99.0 5.9E-10 2E-14 91.1 7.8 86 65-152 10-99 (456)
32 3awm_A Fatty acid alpha-hydrox 99.0 3.2E-10 1.1E-14 91.9 4.2 93 53-151 8-103 (415)
33 2zbx_A Cytochrome P450-SU1; be 98.9 1.4E-09 5E-14 88.2 6.8 98 49-152 10-116 (412)
34 3ejb_B Biotin biosynthesis cyt 98.9 3.6E-09 1.2E-13 85.4 8.5 85 65-152 13-101 (404)
35 3dsk_A Cytochrome P450 74A, ch 98.9 3.4E-10 1.2E-14 93.5 2.5 107 43-151 27-149 (495)
36 3oo3_A OXY protein; cytochrome 98.9 1E-09 3.5E-14 88.0 4.7 85 65-152 12-100 (384)
37 3a4g_A Vitamin D hydroxylase; 98.9 2.6E-09 9E-14 86.7 6.5 83 65-151 20-107 (411)
38 4fb2_A P450CIN; heme, monooxyg 98.8 2E-09 6.8E-14 86.9 4.5 85 65-152 19-105 (398)
39 3ivy_A Cytochrome P450 CYP125; 98.8 4.2E-09 1.4E-13 86.0 6.5 84 65-151 37-136 (433)
40 1cpt_A Cytochrome P450-TERP; o 98.8 2.4E-09 8.1E-14 87.3 4.9 102 43-152 5-123 (428)
41 1s1f_A Putative cytochrome P45 98.8 2.5E-09 8.6E-14 86.6 4.6 96 46-151 11-113 (406)
42 1z8o_A 6-deoxyerythronolide B 98.8 9.1E-09 3.1E-13 83.2 7.7 82 65-151 14-110 (404)
43 3abb_A CYP105D6, cytochrome P4 98.8 4.6E-09 1.6E-13 85.0 5.3 84 65-152 24-115 (408)
44 2jjn_A Cytochrome P450 113A1; 98.8 3E-09 1E-13 86.2 4.0 80 65-151 28-107 (411)
45 2y5n_A MYCG, P-450-like protei 98.7 4.4E-09 1.5E-13 85.6 3.8 83 65-151 37-123 (417)
46 2zwu_A Camphor 5-monooxygenase 98.7 1.2E-08 4.3E-13 82.9 6.2 105 40-151 7-121 (415)
47 3aba_A Cytochrome P450; oxidor 98.7 8.2E-09 2.8E-13 83.5 3.5 84 65-152 19-108 (403)
48 1odo_A Putative cytochrome P45 98.7 2.2E-08 7.5E-13 81.0 5.5 84 65-152 15-108 (408)
49 2z36_A MOXA, cytochrome P450 t 98.7 1.5E-08 5.1E-13 82.3 4.3 84 65-152 22-116 (413)
50 3tyw_A Putative cytochrome P45 98.6 1.7E-08 6E-13 81.9 4.3 84 65-152 29-120 (417)
51 2wm5_A CYP124, putative cytoch 98.6 1.7E-08 5.7E-13 82.6 4.0 84 66-152 45-138 (435)
52 2xbk_A PIMD protein; epoxidati 98.6 2.3E-08 8E-13 81.0 4.3 82 65-151 26-117 (404)
53 2z3t_A Cytochrome P450; monoxy 98.6 3.6E-08 1.2E-12 80.3 5.2 84 65-152 20-119 (425)
54 1gwi_A CYP154C1, cytochrome P4 98.6 1.1E-07 3.6E-12 77.2 7.7 84 65-152 17-113 (411)
55 2uuq_A CYP130, cytochrome P450 98.6 4.1E-08 1.4E-12 79.7 5.3 83 65-152 25-117 (414)
56 3oft_A Cytochrome P450, CYP101 98.6 1.8E-08 6.2E-13 81.1 2.7 83 65-151 24-106 (396)
57 3lxh_A Cytochrome P450; heme, 98.5 4.5E-08 1.5E-12 79.5 4.2 85 65-152 38-123 (421)
58 1q5d_A P450 epoxidase; cytochr 98.5 3.6E-08 1.2E-12 80.1 3.4 82 65-152 26-116 (419)
59 3mgx_A Putative P450 monooxyge 98.5 6E-08 2E-12 78.9 4.2 85 65-152 37-127 (415)
60 3r9b_A Cytochrome P450 164A2; 98.5 1.4E-07 4.9E-12 76.3 6.3 81 65-151 29-117 (418)
61 3dan_A Cytochrome P450 74A2; A 98.5 3.9E-08 1.3E-12 80.5 2.6 109 41-152 7-132 (473)
62 2dkk_A Cytochrome P450; CYP158 98.5 9.3E-08 3.2E-12 77.6 4.3 83 65-151 27-116 (411)
63 3tkt_A Cytochrome P450; aromat 98.5 6.6E-08 2.3E-12 79.3 3.1 83 67-152 47-145 (450)
64 2xkr_A CYP142, putative cytoch 98.5 1.7E-07 5.7E-12 75.5 5.3 78 65-151 18-95 (398)
65 3buj_A CALO2; heme, iron, meta 98.4 2.2E-07 7.6E-12 74.8 4.7 82 65-153 13-101 (397)
66 1io7_A Cytochrome P450 CYP119; 98.3 7.4E-07 2.5E-11 71.0 6.0 78 68-152 2-89 (368)
67 3nc3_A Cytochrome P450 CYPX; c 98.3 8.8E-08 3E-12 78.4 0.5 82 65-152 53-134 (441)
68 1lfk_A OXYB, P450 monooxygenas 98.3 4.7E-07 1.6E-11 72.9 4.6 77 71-151 19-108 (398)
69 3b4x_A 367AA long hypothetical 98.3 6.5E-07 2.2E-11 71.4 5.2 78 68-153 2-90 (367)
70 1n40_A P450 MT2, cytochrome P4 98.2 1.9E-07 6.5E-12 75.3 0.6 86 65-159 16-109 (396)
71 3rwl_A Cytochrome P450 alkane 98.1 3.3E-06 1.1E-10 68.7 6.5 85 65-152 38-132 (426)
72 2rfb_A Cytochrome P450; heme, 98.1 8.6E-07 2.9E-11 70.0 1.6 65 76-151 2-67 (343)
73 3p3o_A Cytochrome P450; monoox 97.9 2.2E-06 7.6E-11 69.4 0.8 81 65-151 33-120 (416)
74 4dnj_A Putative cytochrome P45 97.7 2.1E-05 7.1E-10 63.7 3.5 83 65-152 34-120 (412)
75 2wiy_A XPLA-heme, cytochrome P 97.7 2E-05 6.9E-10 63.3 3.2 80 65-151 20-99 (394)
76 4dxy_A Cytochrome P450, CYP101 96.2 0.0024 8.3E-08 51.7 3.0 83 65-151 37-121 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 93.3 0.01 3.6E-07 47.6 -1.0 94 51-163 42-145 (381)
78 2diu_A KIAA0430 protein; struc 78.7 6.9 0.00024 24.8 5.7 63 52-115 11-75 (96)
79 1nu4_A U1A RNA binding domain; 67.5 17 0.00058 21.9 5.7 59 48-106 6-70 (97)
80 2a3j_A U1 small nuclear ribonu 65.6 25 0.00085 23.0 6.5 59 48-106 27-91 (127)
81 2krb_A Eukaryotic translation 56.7 27 0.00091 20.3 7.3 52 53-106 4-66 (81)
82 2dgx_A KIAA0430 protein; RRM d 55.7 32 0.0011 20.8 5.8 55 51-105 10-70 (96)
83 3d2w_A TAR DNA-binding protein 50.9 37 0.0013 20.3 6.3 51 48-102 9-63 (89)
84 1iqt_A AUF1, heterogeneous nuc 50.7 32 0.0011 19.4 5.2 50 54-107 3-61 (75)
85 1s79_A Lupus LA protein; RRM, 50.3 43 0.0015 20.8 7.3 52 51-106 12-71 (103)
86 2nlw_A Eukaryotic translation 49.9 43 0.0015 20.6 6.9 54 51-106 16-80 (105)
87 3beg_B Splicing factor, argini 48.7 48 0.0016 20.8 6.5 52 51-106 17-70 (115)
88 3lqv_A PRE-mRNA branch site pr 48.7 46 0.0016 20.7 8.7 57 45-105 3-65 (115)
89 2cq1_A PTB-like protein L; RRM 40.5 64 0.0022 19.9 6.5 57 45-105 10-69 (101)
90 3tyt_A Heterogeneous nuclear r 40.2 95 0.0032 21.8 7.0 53 49-105 3-60 (205)
91 2ad9_A Polypyrimidine tract-bi 38.6 78 0.0027 20.4 6.3 56 46-105 27-85 (119)
92 1x4c_A Splicing factor, argini 36.7 73 0.0025 19.5 7.8 52 51-106 16-69 (108)
93 1x4e_A RNA binding motif, sing 35.6 65 0.0022 18.6 5.6 52 50-105 5-65 (85)
94 3s8s_A Histone-lysine N-methyl 34.8 83 0.0028 19.6 6.3 52 51-106 7-67 (110)
95 2mss_A Protein (musashi1); RNA 34.2 63 0.0022 18.1 5.8 48 54-105 3-59 (75)
96 1x4d_A Matrin 3; structural ge 34.1 85 0.0029 19.5 6.6 55 48-105 13-70 (102)
97 1sjq_A Polypyrimidine tract-bi 33.7 89 0.0031 19.6 6.8 52 50-105 16-70 (105)
98 2xnq_A Nuclear polyadenylated 32.9 82 0.0028 18.9 7.4 55 48-106 20-76 (97)
99 4f25_A Polyadenylate-binding p 31.6 95 0.0033 19.3 6.1 51 52-106 7-64 (115)
100 2dgu_A Heterogeneous nuclear r 30.5 92 0.0031 18.8 6.7 52 51-106 12-64 (103)
101 2jwn_A Embryonic polyadenylate 30.0 1E+02 0.0035 19.2 5.9 48 53-104 39-95 (124)
102 2jvr_A Nucleolar protein 3; RN 29.5 1.1E+02 0.0037 19.3 6.3 52 51-106 29-86 (111)
103 3ns6_A Eukaryotic translation 29.3 97 0.0033 18.7 6.0 55 51-105 7-72 (100)
104 4f02_A Polyadenylate-binding p 29.1 1.5E+02 0.005 20.7 6.3 56 47-106 12-76 (213)
105 3s6e_A RNA-binding protein 39; 27.4 1.2E+02 0.004 19.3 4.7 66 47-112 4-81 (114)
106 2err_A Ataxin-2-binding protei 27.2 1.1E+02 0.0036 18.9 4.5 51 51-105 30-87 (109)
107 2cqc_A Arginine/serine-rich sp 27.0 1E+02 0.0034 18.1 7.1 55 48-106 13-76 (95)
108 3bs9_A Nucleolysin TIA-1 isofo 27.0 95 0.0032 17.8 6.0 52 51-106 7-67 (87)
109 1x4b_A Heterogeneous nuclear r 26.7 1.2E+02 0.004 18.7 5.0 51 52-106 29-88 (116)
110 2cpz_A CUG triplet repeat RNA- 25.9 1.2E+02 0.0041 18.6 6.1 55 48-106 23-86 (115)
111 3s7r_A Heterogeneous nuclear r 25.7 1E+02 0.0035 17.7 5.8 52 51-106 12-72 (87)
112 2dnz_A Probable RNA-binding pr 25.6 1.1E+02 0.0037 18.0 8.4 52 50-105 5-65 (95)
113 4fxv_A ELAV-like protein 1; RN 25.5 1.2E+02 0.004 18.4 6.1 51 52-106 21-80 (99)
114 2adc_A Polypyrimidine tract-bi 25.5 1.8E+02 0.0061 20.5 8.1 53 49-105 33-90 (229)
115 2dnq_A RNA-binding protein 4B; 25.3 1.1E+02 0.0037 17.9 7.5 52 50-105 8-60 (90)
116 2hvz_A Splicing factor, argini 25.2 1.1E+02 0.0039 18.2 6.0 48 54-105 4-55 (101)
117 2cq4_A RNA binding motif prote 25.1 1.2E+02 0.0042 18.5 5.4 48 53-104 28-84 (114)
118 2lyd_B Pacman protein; DCP1, X 25.1 7.1 0.00024 19.5 -1.2 9 164-172 22-30 (38)
119 2voo_A Lupus LA protein; RNA-b 25.0 1.6E+02 0.0055 20.4 5.5 50 53-106 112-169 (193)
120 3ex7_B RNA-binding protein 8A; 24.8 1.3E+02 0.0045 18.8 7.1 52 51-106 23-83 (126)
121 2kxn_B Transformer-2 protein h 24.8 1.4E+02 0.0048 19.1 8.1 54 49-106 45-107 (129)
122 1oo0_B CG8781-PA, drosophila Y 24.7 1.2E+02 0.0042 18.4 7.0 50 52-105 28-86 (110)
123 2d9p_A Polyadenylate-binding p 24.5 1.2E+02 0.0041 18.1 6.3 54 49-106 14-74 (103)
124 2rs2_A Musashi-1, RNA-binding 24.3 1.3E+02 0.0044 18.5 6.0 52 51-106 26-86 (109)
125 2dhg_A TRNA selenocysteine ass 24.3 1.2E+02 0.0041 18.1 7.6 55 48-106 7-70 (104)
126 2cpi_A CCR4-NOT transcription 24.3 81 0.0028 19.5 3.5 52 51-106 16-82 (111)
127 2do4_A Squamous cell carcinoma 24.2 1.2E+02 0.0041 18.0 7.2 53 50-106 17-77 (100)
128 3pgw_S U1-70K; protein-RNA com 24.0 2.3E+02 0.0077 22.7 6.8 52 51-106 103-163 (437)
129 2fy1_A RNA-binding motif prote 23.8 1.4E+02 0.0047 18.6 5.4 52 51-106 8-67 (116)
130 2dgv_A HnRNP M, heterogeneous 23.7 1.2E+02 0.004 17.7 6.9 52 51-106 9-67 (92)
131 2khc_A Testis-specific RNP-typ 23.3 1.4E+02 0.0047 18.4 6.5 52 51-106 41-101 (118)
132 3zzy_A Polypyrimidine tract-bi 23.1 1.6E+02 0.0056 19.2 6.1 57 45-105 21-84 (130)
133 2dgt_A RNA-binding protein 30; 23.0 1.2E+02 0.0042 17.7 7.2 52 50-105 10-62 (92)
134 1whx_A Hypothetical protein ri 23.0 1.4E+02 0.0048 18.4 6.7 59 52-114 12-74 (111)
135 1rk8_A CG8781-PA, CG8781-PA pr 22.9 1.7E+02 0.0059 19.4 6.2 51 52-106 74-133 (165)
136 1p27_B RNA-binding protein 8A; 22.7 1.3E+02 0.0046 18.0 7.2 51 52-106 25-84 (106)
137 1whw_A Hypothetical protein ri 22.4 1.3E+02 0.0044 17.8 7.0 52 51-106 9-69 (99)
138 1whv_A Poly(A)-specific ribonu 22.3 1E+02 0.0036 19.4 3.5 40 66-105 27-67 (100)
139 2cq0_A Eukaryotic translation 22.1 1.1E+02 0.0037 18.3 3.7 52 51-106 16-76 (103)
140 1av3_A Kappa-PVIIA; kappa-cono 21.7 32 0.0011 15.6 0.7 8 168-175 3-10 (27)
141 2e5h_A Zinc finger CCHC-type a 21.4 1.3E+02 0.0045 17.5 7.3 54 48-105 14-76 (94)
142 3r27_A HnRNP L, heterogeneous 21.4 1.6E+02 0.0053 18.3 7.8 55 47-105 18-75 (100)
143 1wf0_A TDP-43, TAR DNA-binding 20.9 1.1E+02 0.0039 17.6 3.6 48 51-102 6-57 (88)
144 1uaw_A Mouse-musashi-1; RNP-ty 20.9 1.2E+02 0.0041 16.8 4.2 51 54-108 4-63 (77)
145 2dnm_A SRP46 splicing factor; 20.6 1.5E+02 0.005 17.7 6.3 51 51-105 14-73 (103)
146 1sjr_A Polypyrimidine tract-bi 20.6 2.1E+02 0.0073 19.6 7.0 50 53-106 49-103 (164)
147 1p1t_A Cleavage stimulation fa 20.6 1.5E+02 0.005 17.7 4.8 52 51-106 9-69 (104)
148 3pgw_A U1-A; protein-RNA compl 20.4 2.5E+02 0.0085 20.3 6.6 58 49-106 8-71 (282)
149 3n9u_C Cleavage and polyadenyl 20.2 2E+02 0.0068 19.1 6.3 51 52-106 57-118 (156)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.77 E-value=1.1e-18 Score=144.57 Aligned_cols=112 Identities=23% Similarity=0.414 Sum_probs=91.5
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+..+.||||.++|++||+.++.....++..+.+|.++||+++++++|+.++++++||+++++++.++...|.+++.....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~ 84 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL 84 (494)
T ss_dssp -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 34556777779999999998864346889999999999999999999999999999999999999988899888876555
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
...+.+++|++++++|+.|+++||+++++++.
T Consensus 85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~ 116 (494)
T 3swz_A 85 DIASNNRKGIAFADSGAHWQLHRRLAMATFAL 116 (494)
T ss_dssp HHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTT
T ss_pred HHhccCCCCeEeCCCCHHHHHHHHHHHHHHHH
Confidence 55655567888887799999999999998863
No 2
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.74 E-value=3e-18 Score=140.91 Aligned_cols=110 Identities=18% Similarity=0.284 Sum_probs=90.9
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
.++||||.++|++||++++.. .+.+..+.+|.++||+||++++|+.++++++||+++++++.++...|++|+.......
T Consensus 9 ~kLPPGP~~lP~iGn~~~~~~-~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~ 87 (479)
T 3tbg_A 9 GKLPPGPLPLPGLGNLLHVDF-QNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87 (479)
T ss_dssp CCCCCCSCCBTTTBTGGGCCT-TSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGG
T ss_pred CCCCCCCCCcCcccchHhhcC-CCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHH
Confidence 357888889999999998864 6789999999999999999999999999999999999999988888888876554443
Q ss_pred hhc--CCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 123 FGY--NFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 123 ~~~--~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
++. .+.+++++.+|+.|+++|+++++++...
T Consensus 88 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~ 120 (479)
T 3tbg_A 88 LGFGPRSQGVFLARYGPAWREQRRFSVSTLRNL 120 (479)
T ss_dssp GTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHT
T ss_pred hccCCCCCceeeCCCCHHHHHHHHHHHHHhcch
Confidence 332 2356666666999999999999876543
No 3
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.67 E-value=6.4e-17 Score=133.98 Aligned_cols=108 Identities=19% Similarity=0.422 Sum_probs=72.5
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+..+.||+|.++|++||+.++. .+++..+.++.++||+++++++++.++++++||+++++++.++...|.+++.....
T Consensus 6 ~~~~~pPgP~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 83 (507)
T 3pm0_A 6 SSKGKPPGPFAWPLIGNAAAVG--QAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASF 83 (507)
T ss_dssp ------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHH
T ss_pred CCCCCCcCCCCCCeeCchhhcC--ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHH
Confidence 3345666667899999999887 68999999999999999999999999999999999999998888888877765544
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
.... ++.|++++.+|+.|+++||+++++++
T Consensus 84 ~~~~-~g~~l~~~~~g~~w~~~R~~~~~~~~ 113 (507)
T 3pm0_A 84 RVVS-GGRSMAFGHYSEHWKVQRRAAHSMMR 113 (507)
T ss_dssp HHGG-GGTCSSSSCSSHHHHHHHHHHHHHHH
T ss_pred Hhhc-CCCceEECCCChHHHHHHHHHHHHHH
Confidence 4333 34677676569999999999998643
No 4
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.65 E-value=9.9e-17 Score=132.26 Aligned_cols=105 Identities=16% Similarity=0.153 Sum_probs=85.7
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhC-CcccCCCCchhH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTH-DKVFASRPKTLA 119 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~-~~~f~~~~~~~~ 119 (181)
+.+++|+|+ ++|++||+.++. .+++..+.++.++||+++++++|+.+.++++||+++++++.++ ...|.+++....
T Consensus 12 k~~~~PGP~-~~PliGn~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~ 88 (485)
T 3nxu_A 12 KKLGIPGPT-PLPFLGNILSYH--KGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGP 88 (485)
T ss_dssp HHHTCCCCC-CBTTTBTGGGGG--GCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSC
T ss_pred hhCCCCCCC-CcCeecCcHHhh--cChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccc
Confidence 445666665 899999999986 6789999999999999999999999999999999999999876 566766654332
Q ss_pred HHHhhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 120 MEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 120 ~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.... +.+++.++ |+.|+++||+++++++.
T Consensus 89 ~~~~---~~~l~~~~-g~~w~~~R~~~~~~fs~ 117 (485)
T 3nxu_A 89 VGFM---KSAISIAE-DEEWKRLRSLLSPTFTS 117 (485)
T ss_dssp CGGG---GGSTTTCC-HHHHHHHHHHHGGGGCH
T ss_pred cccc---ccCccccC-CcHHHHHHhhcChhcCH
Confidence 2222 36777777 99999999999998764
No 5
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.64 E-value=2.7e-16 Score=129.29 Aligned_cols=107 Identities=21% Similarity=0.330 Sum_probs=86.4
Q ss_pred ccCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~ 120 (181)
+..++||+|.++|++||+.++.. .+++..+.+|.++||+++++++++.++++++||+++++++.++...|.+++.....
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLEL-KNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred CCCCCCcCCCCcccccChhhhcc-ccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 44566777779999999999843 68899999999999999999999999999999999999999877788776554333
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
.... + .|+++++ |+.|+++||++++++.
T Consensus 86 ~~~~-~-~~l~~~~-g~~w~~~Rr~~~~~l~ 113 (476)
T 3e6i_A 86 HAHR-D-RGIIFNN-GPTWKDIRRFSLTTLR 113 (476)
T ss_dssp GGGT-T-SSSTTCC-STTHHHHHHHHHHHHH
T ss_pred heec-C-CCEEecC-CcHHHHHHHHHHHHHH
Confidence 3222 2 3788887 9999999999887654
No 6
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.63 E-value=1.7e-16 Score=131.35 Aligned_cols=108 Identities=12% Similarity=0.052 Sum_probs=82.3
Q ss_pred CCCCCCCCcceeeecccCCCC--CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhH-H
Q 038607 44 RAPEAGGAWPVTGHLHLLGGP--EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA-M 120 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~-~ 120 (181)
+.||+|.++|++||++++... ...+..+.++.++||+++++++|+.+.++++||+++++++.+ ..|.+++.... .
T Consensus 45 ~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~~~ 122 (503)
T 3s79_A 45 SSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKLGL 122 (503)
T ss_dssp CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHHHH
T ss_pred CCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhhhh
Confidence 445555689999999887410 235567889999999999999999999999999999999954 35666654322 2
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
...+..++|++++.+|+.|+++||+++++++.+
T Consensus 123 ~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~ 155 (503)
T 3s79_A 123 QCIGMHEKGIIFNNNPELWKTTRPFFMKALSGP 155 (503)
T ss_dssp HHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTH
T ss_pred hhhccCCCceeeCCCccHHHHHHHhhhHhhChH
Confidence 334445577776666999999999999988643
No 7
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.61 E-value=1.7e-16 Score=131.24 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=80.3
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
.++||+|.+ +.++.. .+++..+.++.++||+++++++|+.+.++++||+++++++.++...|.+++.......
T Consensus 28 ~~lPPGP~~------l~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~ 100 (496)
T 3qz1_A 28 LHLPPLVPG------FLHLLQ-PNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKL 100 (496)
T ss_dssp -CCCCBCSC------SCTTSS-SCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTT
T ss_pred CCCCcCCcc------ccccCC-CcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHH
Confidence 455555543 455533 7899999999999999999999999999999999999999888778887765543333
Q ss_pred hhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 123 FGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 123 ~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
...++.|++++++|+.|+++||+++++++
T Consensus 101 ~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~ 129 (496)
T 3qz1_A 101 VSQRCQDISLGDYSLLWKAHKKLTRSALL 129 (496)
T ss_dssp SCTTCCCSSSSCCSHHHHHHHHHHHHHHH
T ss_pred hcCCCCceEECCCCHHHHHHHHHHHHHHh
Confidence 33233488888779999999999999987
No 8
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.59 E-value=6.3e-16 Score=127.08 Aligned_cols=106 Identities=14% Similarity=0.142 Sum_probs=84.3
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF 123 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~ 123 (181)
.+|.++.++|++||++++. ++++..+.+++++||+||++++++.+.++++||+++++++.++...|..++........
T Consensus 12 ~PP~~~~~lP~iG~~~~~~--~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~ 89 (461)
T 3ld6_A 12 SPPYIFSPIPFLGHAIAFG--KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP 89 (461)
T ss_dssp CCCBCCCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH
T ss_pred CCCCCCCCcCeeeeHHHhh--hCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc
Confidence 3444544699999999987 68999999999999999999999999999999999999998888778766543322211
Q ss_pred hcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 124 GYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 124 ~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.. |+|++++.+|+.|+++|++++++++.
T Consensus 90 ~~-g~~~~~~~~~~~~~~~R~~~~~~f~~ 117 (461)
T 3ld6_A 90 VF-GKGVAYDVPNPVFLEQKKMLKSGLNI 117 (461)
T ss_dssp HH-CTTSGGGSCHHHHHHHHHHHHHHSSH
T ss_pred cC-CCccccCCCcHHHHHHHHhccccccH
Confidence 12 25666655599999999999998753
No 9
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.56 E-value=2.4e-15 Score=124.67 Aligned_cols=102 Identities=24% Similarity=0.478 Sum_probs=82.6
Q ss_pred CCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcC
Q 038607 47 EAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYN 126 (181)
Q Consensus 47 ~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~ 126 (181)
|+|.++|++||+..+. .+++..+.++.++||+++++++++.++++++||+++++++.++...|.+++......... +
T Consensus 19 PgP~~~p~~G~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~~-~ 95 (495)
T 2hi4_A 19 PEPWGWPLLGHVLTLG--KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLIT-D 95 (495)
T ss_dssp CCCCCBTTTBTHHHHT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTST-T
T ss_pred CCCCCCcceeeHHhcC--ccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHhc-C
Confidence 4555899999998886 578999999999999999999999999999999999999987766787666443322222 3
Q ss_pred CcceEeC-CCCchHHHHhhhhcccCC
Q 038607 127 FSMFGFS-PYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 127 ~~gl~~~-~~g~~Wk~~Rr~l~pa~~ 151 (181)
+.|++++ ++|+.|+++||+++++++
T Consensus 96 ~~~l~~~~~~g~~w~~~Rr~~~~~f~ 121 (495)
T 2hi4_A 96 GQSLTFSTDSGPVWAARRRLAQNALN 121 (495)
T ss_dssp SCCTTTSSCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEcCCCChHHHHHHHHHHHHHH
Confidence 4677777 349999999999998743
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.56 E-value=3.8e-15 Score=122.90 Aligned_cols=107 Identities=20% Similarity=0.266 Sum_probs=84.7
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
.+.||+|.++|++||+.++.. .+++..+.+++++||+++++++++.+.++++||+++++|+.++...|.+++.......
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 1po5_A 9 GKLPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP 87 (476)
T ss_dssp CCCCCCSCCBTTTBTGGGCCT-TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred CCCCcCCCCCCccccHHhccC-CcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence 345666668999999998832 6889999999999999999999999999999999999999776677776543322221
Q ss_pred hhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 123 FGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 123 ~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.. .+.|+++++ |+.|+++||+++++++-
T Consensus 88 ~~-~~~~l~~~~-g~~w~~~Rr~~~~~f~~ 115 (476)
T 1po5_A 88 IF-QGYGVIFAN-GERWRALRRFSLATMRD 115 (476)
T ss_dssp CC-SSCCCCCSS-HHHHHHHHHHHHHHHHH
T ss_pred hc-CCCceEecC-CcHHHHHHHHHHHHHHH
Confidence 22 346888886 99999999999887643
No 11
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.56 E-value=1.7e-15 Score=123.60 Aligned_cols=106 Identities=17% Similarity=0.137 Sum_probs=85.5
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
.+|++|.++|++||+.++. .+++..+.+++++|| ++|++++++.+.++++||+++++++.++...|.+++.......
T Consensus 4 ~PPg~p~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 4 LPPVYPVTVPILGHIIQFG--KSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CCCBCCCCSTTTBTHHHHH--HCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCcchhccHHHHc--cCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 3455566699999999886 679999999999999 9999999999999999999999999887777877654433322
Q ss_pred hhcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 123 FGYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 123 ~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
.. |.|++++.+|+.|+++||+++++++..
T Consensus 82 ~~--g~~~~~~~~~~~~~~~R~~~~~~f~~~ 110 (450)
T 3gw9_A 82 VF--GEGVAYAAPYPRMREQLNFLAEELTIA 110 (450)
T ss_dssp HH--CTTSGGGSCHHHHHHHHHHHHHTTSGG
T ss_pred Hh--cCCcccCCCcHHHHHHHHHHHHHHhHH
Confidence 22 256666545999999999999987643
No 12
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.55 E-value=6.2e-15 Score=121.59 Aligned_cols=105 Identities=20% Similarity=0.261 Sum_probs=84.7
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF 123 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~ 123 (181)
+.||+|.++|++||+.++.. .+++..+.+++++||+++++++++.+.++++||+++++++.++...|.+++........
T Consensus 10 ~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~ 88 (476)
T 2fdv_A 10 KLPPGPTPLPFIGNYLQLNT-EQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWV 88 (476)
T ss_dssp BCCCCCCCBTTTBTGGGCCT-TBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHH
T ss_pred CCCCCCCCCcccccHhhcCC-cchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhh
Confidence 45666668999999998843 67899999999999999999999999999999999999997766677665543322222
Q ss_pred hcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 124 GYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 124 ~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
.. +.|++.++ |+.|+++||+++++++
T Consensus 89 ~~-~~~l~~~~-g~~~~~~Rr~~~~~f~ 114 (476)
T 2fdv_A 89 FK-GYGVVFSN-GERAKQLRRFSIATLR 114 (476)
T ss_dssp HT-TCSSSSCC-HHHHHHHHHHHHHHHH
T ss_pred cC-CCCeEecC-chHHHHHHHHHHHHHH
Confidence 22 36888887 9999999999999874
No 13
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.55 E-value=1.3e-15 Score=125.24 Aligned_cols=112 Identities=19% Similarity=0.251 Sum_probs=86.3
Q ss_pred cccCCCCCCCCCcceeeecccCC---CCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc
Q 038607 40 KKKRRAPEAGGAWPVTGHLHLLG---GPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK 116 (181)
Q Consensus 40 ~~~~~~P~~p~~~p~~G~l~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~ 116 (181)
+..+.+|+|+ ++|++||+.++. ...+.+..+.++.++||+++++++|+.+.++++||+++++++.+ ...|.+++.
T Consensus 21 ~pl~~~PGP~-~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~-~~~~~~r~~ 98 (482)
T 3k9v_A 21 RNVTDLPGPT-NWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRT-ESAHPQRLE 98 (482)
T ss_dssp EEGGGCCCSC-CCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHT-CCSSCCCCC
T ss_pred CCCCCCCCCC-CCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHh-cCCCCCCCC
Confidence 3566677664 899999998773 11468889999999999999999999999999999999999986 456766654
Q ss_pred hh---HHHHhhcCCcceEeCCCCchHHHHhhhhcccCCCCC
Q 038607 117 TL---AMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPV 154 (181)
Q Consensus 117 ~~---~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~ 154 (181)
.. ........+.|++.++ |+.|+++||++++++..++
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~~~f~~~~ 138 (482)
T 3k9v_A 99 IKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQKKLMKPV 138 (482)
T ss_dssp CHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHHHHHTCHH
T ss_pred chHHHHHHHhcCCCCCceeCC-CchHHHHHHHhhHHhcChH
Confidence 32 1122222347888887 9999999999999864433
No 14
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.54 E-value=5.8e-15 Score=122.07 Aligned_cols=108 Identities=21% Similarity=0.347 Sum_probs=83.5
Q ss_pred cCCCCCCCCCcceeeecccCCCCCC--hHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhH
Q 038607 42 KRRAPEAGGAWPVTGHLHLLGGPEP--PHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA 119 (181)
Q Consensus 42 ~~~~P~~p~~~p~~G~l~~~~~~~~--~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~ 119 (181)
.+++||+|.++|++||+..+.. .. ++..+.++.++||+++++++++.++++++||+++++++.++...|++++....
T Consensus 10 ~~~lpPgP~~~p~~G~~~~~~~-~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 10 PMGFPPGPPGLPFIGNIYSLAA-SSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp --CCCCCCCCBTTTBHHHHHHH-CSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCcccccHhhcCc-ccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 3456666778999999987752 22 88999999999999999999999999999999999999877677877764433
Q ss_pred HHHhhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 120 MEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 120 ~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
...+.. +.|+++..+|+.|+++||+++++++
T Consensus 89 ~~~~~~-~~~~~~~~~g~~w~~~R~~~~~~f~ 119 (481)
T 3czh_A 89 FMKMTK-MGGLLNSRYGRGWVDHRRLAVNSFR 119 (481)
T ss_dssp HHHHHT-TCSSTTCCSSHHHHHHHHHHHHHHH
T ss_pred HHhhcC-CCCeEeCCCChHHHHHHHHHHHHHH
Confidence 333332 2465554449999999999999864
No 15
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.54 E-value=3.2e-15 Score=122.71 Aligned_cols=106 Identities=13% Similarity=0.106 Sum_probs=83.4
Q ss_pred cCCCCCC-CCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-H
Q 038607 42 KRRAPEA-GGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-A 119 (181)
Q Consensus 42 ~~~~P~~-p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~ 119 (181)
..+.||+ |.++|++||+.++. .+++..+.+++++||+++++++++.+.+++++++++++++.++...+..+.... .
T Consensus 9 ~~~~PPg~P~~lP~iG~l~~~~--~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 9 GVKSPPYIFSPIPFLGHAIAFG--KSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCccccHHhhc--cCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 3445555 77899999999886 678999999999999999999999999999999999999987766665433222 1
Q ss_pred HHHhhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 120 MEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 120 ~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
..... |+|+++..+|+.|+++||+++++++
T Consensus 87 ~~~~~--g~g~~~~~~g~~w~~~Rr~~~~~f~ 116 (461)
T 3i3k_A 87 TTPVF--GKGVAYDVPNPVFLEQKKMLKSGLN 116 (461)
T ss_dssp HHHHH--CTTSGGGSCHHHHHHHHHHHHHHSS
T ss_pred hhhhc--CCeeeeCCCcHHHHHHHHHHhhhhC
Confidence 11111 3677776559999999999999875
No 16
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.50 E-value=6.1e-15 Score=121.60 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=78.4
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF 123 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~ 123 (181)
+.||+|.++|++||+.++.. .+++..+.+++++||+++++++++.+.++++||+++++++.++...|.+++........
T Consensus 11 ~~pPgP~~~p~iG~~~~~~~-~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~ 89 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQIGI-KDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERA 89 (477)
T ss_dssp BCCCCSSSCC-----CCBCH-HHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTT
T ss_pred CCCCCCCCCceeccHhhcCC-CChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhc
Confidence 45666668999999988832 56888999999999999999999889999999999999997766677655432211112
Q ss_pred hcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 124 GYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 124 ~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
. .+.|+++++ |+.|+++||++++++.-.
T Consensus 90 ~-~~~~l~~~~-g~~w~~~Rr~~~~~~~~~ 117 (477)
T 1r9o_A 90 N-RGFGIVFSN-GKKWKEIRRFSLMTLRNF 117 (477)
T ss_dssp T-CTTSSTTCC-HHHHHHHHHHHHHHHTTS
T ss_pred c-CCCceEecC-ChHHHHHHHHHHHHHHHh
Confidence 2 236787776 999999999998877543
No 17
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.42 E-value=5e-13 Score=110.21 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=78.9
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~ 122 (181)
+++|+| .++|++||++++.. .+++..+.++.++||+++++++++.+.++++||+++++++.+ ..|...........
T Consensus 3 ~~~PGP-~~~p~iG~l~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~~~~~~~ 78 (470)
T 2ij2_A 3 KEMPQP-KTFGELKNLPLLNT-DKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLSQALKFV 78 (470)
T ss_dssp CCCCCC-CCCGGGTTGGGGCS-SCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCCHHHHHH
T ss_pred CCCCCC-CCCCccccHHHHhc-ccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCchhHHHHH
Confidence 345555 48999999998853 578889999999999999999999999999999999999954 23432221111111
Q ss_pred hhcCCcceEeC-CCCchHHHHhhhhcccCCCC
Q 038607 123 FGYNFSMFGFS-PYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 123 ~~~~~~gl~~~-~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
....+.|++.+ .+|+.|+++||+++++++-.
T Consensus 79 ~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~ 110 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQ 110 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTT
T ss_pred HHhcCCceEEcCCCchHHHHHHHHhccccCHH
Confidence 11123577776 34999999999999998643
No 18
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.42 E-value=3.4e-14 Score=117.48 Aligned_cols=106 Identities=17% Similarity=0.103 Sum_probs=79.1
Q ss_pred ccCCCCCCCCC-cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCC-cccCCCCchh
Q 038607 41 KKRRAPEAGGA-WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHD-KVFASRPKTL 118 (181)
Q Consensus 41 ~~~~~P~~p~~-~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~-~~f~~~~~~~ 118 (181)
+..+.||+|.+ +|++||+..+. .+++..+.+++++||+++++++++.+++++++|+++++++.++. ..+..+....
T Consensus 10 ~~~~~PPgp~~~lPliG~~~~~~--~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~ 87 (491)
T 3v8d_A 10 RQTGEPPLENGLIPYLGCALQFG--ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFAL 87 (491)
T ss_dssp CCTTSCCEEEEEESSTTTTGGGT--CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHH
T ss_pred cCCCCCCCCCCCcceeccHHHHh--cCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHH
Confidence 44456666667 69999999997 78999999999999999999999999999999999999996543 1233222222
Q ss_pred HHHHhhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 119 AMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 119 ~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
....++. .++...+ |+.|+++|+.++++++
T Consensus 88 ~~~~~g~--~~~~~~~-g~~~~~~Rr~~~~~f~ 117 (491)
T 3v8d_A 88 SAKAFGH--RSIDPMD-GNTTENINDTFIKTLQ 117 (491)
T ss_dssp HHHHHTC--CCCCGGG-SSBCCCHHHHHHHHHS
T ss_pred HHHhcCC--ccccccc-chhHHHHHHHHHHHcC
Confidence 2233332 2333345 9999999999887764
No 19
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.41 E-value=6.9e-14 Score=115.05 Aligned_cols=104 Identities=20% Similarity=0.221 Sum_probs=65.2
Q ss_pred CCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc-hhHHH
Q 038607 43 RRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLAME 121 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-~~~~~ 121 (181)
+.+|++|.++|++||+.++. .+++..+.++++ ||+++++++++.+.++++|++++++++.++ .|..+.. .....
T Consensus 22 ~eppPgP~~~P~iG~~~~~~--~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~ 96 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLA--RDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE 96 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHH--HCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-----------
T ss_pred CCCCCCCCCCCcccchHHhc--cCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH
Confidence 55677777999999999887 678999999888 999999999999999999999999999765 5532322 22111
Q ss_pred HhhcCCcceEeCCCCchHHHHhhhhcccCCCC
Q 038607 122 IFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 122 ~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~ 153 (181)
... +.+|++..+ |+.|+++||+++++++..
T Consensus 97 ~~~-g~~~l~~~d-g~~h~~~R~~l~~~fs~~ 126 (467)
T 3dbg_A 97 GLL-GKEGVATAN-GPLHRRQRRTIQPAFRLD 126 (467)
T ss_dssp ---------------------CGGGHHHHSTT
T ss_pred Hhc-CCCCcccCC-cHHHHHHHHHhhhhhCHH
Confidence 111 225777777 999999999999987543
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.39 E-value=5.9e-13 Score=109.30 Aligned_cols=101 Identities=14% Similarity=0.073 Sum_probs=63.2
Q ss_pred CCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhh
Q 038607 45 APEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFG 124 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~ 124 (181)
+|++|.++|++||+.++. .+++..+.+++++||+++++++++.++++++|++++++++.++...|..++.........
T Consensus 6 PPg~p~~~P~iG~~~~~~--~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 6 LPRVSGGHDEHGHLEEFR--TDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp CCBCSCCCBTTBTHHHHT--TCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCccCHHHHh--hChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 344477899999998886 678999999999999999999999999999999999999976656666554332222121
Q ss_pred cCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 125 YNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 125 ~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
+ .+++ .+ |+.|+++|++++++++
T Consensus 84 -g-~~~~-~~-~~~~~~~R~~~~~~f~ 106 (455)
T 2cib_A 84 -G-EGVV-FD-ASPERRKEMLHNAALR 106 (455)
T ss_dssp -C-----------------------CC
T ss_pred -C-Cccc-cC-cHHHHHHHhhhccccC
Confidence 2 4554 55 9999999999999876
No 21
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.38 E-value=1.6e-13 Score=112.30 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=78.0
Q ss_pred CCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh
Q 038607 44 RAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF 123 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~ 123 (181)
+.||+|.++|++||+..+. .++. .+.++.++||+++++++++.+.++++||+++++++.++...|..+.........
T Consensus 12 ~~pPgp~~~P~iG~~~~~~--~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~ 88 (444)
T 2ve3_A 12 PIPPGDFGLPWLGETLNFL--NDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILL 88 (444)
T ss_dssp CCCCCCCCBTTTBTHHHHH--HCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCHHHHHHH
T ss_pred CCCCCCCCCCccccHHHHh--cCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhHHHHHHh
Confidence 4555666899999998775 3455 777999999999999988889999999999999997765556533222222223
Q ss_pred hcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 124 GYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 124 ~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
+ ..+++..+ |+.|+++||+++++++
T Consensus 89 g--~~~l~~~~-g~~~~~~R~~~~~~f~ 113 (444)
T 2ve3_A 89 G--PNALATQM-GEIHRSRRKILYQAFL 113 (444)
T ss_dssp C--TTSGGGCC-HHHHHHHHHHHHGGGC
T ss_pred C--ccccccCC-chHHHHHHHHHHhhcC
Confidence 2 23777776 9999999999999876
No 22
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.33 E-value=3.8e-13 Score=110.19 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=72.6
Q ss_pred CCCCCCCCcceeeecc-cCCCCCChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHH
Q 038607 44 RAPEAGGAWPVTGHLH-LLGGPEPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTLAME 121 (181)
Q Consensus 44 ~~P~~p~~~p~~G~l~-~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~ 121 (181)
+.|++|.++|++|++. .+. .+++..+.++ ++||+++++++ ++.+.++++|++++++++.++ .|.+++......
T Consensus 26 ~~~PGP~~~p~lG~~~~~~~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~ 100 (436)
T 2cd8_A 26 QGTTASPPVLDLGALGQDFA--ADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTP 100 (436)
T ss_dssp --------CCBHHHHHHHHH--HCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSC
T ss_pred cCCCCCCccccCCCCCcccc--cChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccc
Confidence 3344445899999985 444 5788899999 89999999997 778999999999999999765 566554311111
Q ss_pred Hh---hcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 122 IF---GYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 122 ~~---~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.. ...+++++..+ |+.|+++||+++++++-
T Consensus 101 ~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~fs~ 133 (436)
T 2cd8_A 101 LTEAEAALNHNMLESD-PPRHTRLRKLVAREFTM 133 (436)
T ss_dssp CCTTGGGTCCSGGGCC-TTHHHHHHHHHGGGSSH
T ss_pred cccccccccccccccC-chHHHHHHHHhHHhhCH
Confidence 00 11236777776 99999999999998763
No 23
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.30 E-value=2.4e-12 Score=106.08 Aligned_cols=108 Identities=14% Similarity=0.046 Sum_probs=79.2
Q ss_pred cccCCCCCCCCCcceeeecccCC---CCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc
Q 038607 40 KKKRRAPEAGGAWPVTGHLHLLG---GPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK 116 (181)
Q Consensus 40 ~~~~~~P~~p~~~p~~G~l~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~ 116 (181)
+..+.+|+|+ ..++. |++.+. .....+..+.++.++||+|+++++|+.+.|+++||+++++++.++ ..|.+++.
T Consensus 6 ~pL~~~PGP~-~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~ 82 (487)
T 3n9y_A 6 RPFNEIPSPG-DNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFL 82 (487)
T ss_dssp BCGGGSCCSC-SCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCC
T ss_pred CCHhhCCCCC-CCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCC
Confidence 3455666664 45543 666552 114678899999999999999999999999999999999999765 46776654
Q ss_pred hhH---HHHhhcCCcceEeCCCCchHHHHhhhhccc-CC
Q 038607 117 TLA---MEIFGYNFSMFGFSPYGSYWRMAMGRGGEG-TD 151 (181)
Q Consensus 117 ~~~---~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa-~~ 151 (181)
... .......+.|++..+ |+.|+++||+++++ ++
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~~~~fs 120 (487)
T 3n9y_A 83 IPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALNQEVMA 120 (487)
T ss_dssp CHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHccccCCCccCC-cHHHHHHHHhcCcccCC
Confidence 322 112222346887777 99999999999986 44
No 24
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.30 E-value=4.5e-13 Score=110.49 Aligned_cols=103 Identities=17% Similarity=0.054 Sum_probs=75.1
Q ss_pred CCCCCCCCC-cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCC-cccCCCCchhHH
Q 038607 43 RRAPEAGGA-WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHD-KVFASRPKTLAM 120 (181)
Q Consensus 43 ~~~P~~p~~-~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~-~~f~~~~~~~~~ 120 (181)
.+.||+|.+ +|++||+.++. .+++..+.+++++||++|++++++.++++++||+++++++.++. ..+.........
T Consensus 12 ~~~pPgp~~~~P~iG~~~~~~--~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~~~~ 89 (491)
T 3dax_A 12 TGEPPLENGLIPYLGCALQFG--ANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFATSA 89 (491)
T ss_dssp TTCCCEEEEEESCTTTTGGGT--CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHHHHH
T ss_pred CCCCCcCCCcccchhhHHHHh--hCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHHHHH
Confidence 344554445 89999999886 67899999999999999999999999999999999999996544 223221111111
Q ss_pred HHhhcCCcceE-eCCCCchHHHHhhhhcccCC
Q 038607 121 EIFGYNFSMFG-FSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 121 ~~~~~~~~gl~-~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
...+ .+++ ..+ |+.|+++|+.+.++++
T Consensus 90 ~~~g---~~~~~~~~-g~~w~~~r~~~~~~f~ 117 (491)
T 3dax_A 90 KAFG---HRSIDPMD-GNTTENINDTFIKTLQ 117 (491)
T ss_dssp HHHT---CCCCCGGG-TSBCCCHHHHHHHHHS
T ss_pred HHcC---CCcccccc-hhHHHHHHHHHHHhcC
Confidence 2232 4555 555 9999999988777654
No 25
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.18 E-value=5.3e-12 Score=101.74 Aligned_cols=93 Identities=14% Similarity=-0.032 Sum_probs=75.5
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCC-chhHHHHhhcCCcc
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRP-KTLAMEIFGYNFSM 129 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~-~~~~~~~~~~~~~g 129 (181)
.+|++||+.++. .+++..+.++.++||++++ ++++.+.++++||+++++++.++ .|.+++ ......... ++|
T Consensus 6 ~~p~iGnl~~~~--~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~~ 78 (389)
T 1n97_A 6 LREAWPYLKDLQ--QDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GRG 78 (389)
T ss_dssp HHHHHHHHHHHH--HCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CSS
T ss_pred cccccccHHHHh--hChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CCc
Confidence 578999998886 5789999999999999999 88889999999999999999765 677665 222222222 267
Q ss_pred eEeCCCCchHHHHhhhhcccCC
Q 038607 130 FGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 130 l~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
++.++ |+.|+++||+++++++
T Consensus 79 l~~~~-g~~h~~~R~~~~~~fs 99 (389)
T 1n97_A 79 LLTDW-GESWKEARKALKDPFL 99 (389)
T ss_dssp TTTCC-HHHHHHHHHHHCGGGS
T ss_pred cccCC-cHHHHHHHHHhCcccC
Confidence 77776 9999999999999875
No 26
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.18 E-value=1.2e-11 Score=102.34 Aligned_cols=96 Identities=18% Similarity=0.095 Sum_probs=68.4
Q ss_pred cCCCCCCCCC-cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-H
Q 038607 42 KRRAPEAGGA-WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-A 119 (181)
Q Consensus 42 ~~~~P~~p~~-~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~ 119 (181)
..+.||+|.+ +|++||+.++. .+++..+.+++++||++|++++++.++++++||+++++++.++...+..++... .
T Consensus 16 ~~~~PPgp~~~~P~iG~~~~~~--~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~ 93 (498)
T 3b6h_A 16 RPGEPPLDLGSIPWLGYALDFG--KDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFL 93 (498)
T ss_dssp CTTCCCEECCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHH
T ss_pred CCCCCCCCCCCCcchhhHHHhc--cCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHH
Confidence 3445555546 89999998886 568999999999999999999999999999999999999976543233332221 1
Q ss_pred HHHhhcCCcceEeCCCCchHHHH
Q 038607 120 MEIFGYNFSMFGFSPYGSYWRMA 142 (181)
Q Consensus 120 ~~~~~~~~~gl~~~~~g~~Wk~~ 142 (181)
.... .|.+++..+ |+.|++.
T Consensus 94 ~~~~--~g~~~~~~~-~~~~rr~ 113 (498)
T 3b6h_A 94 MERI--FDVQLPHYS-PSDEKAR 113 (498)
T ss_dssp HHHT--SCCCCTTCC-HHHHHHH
T ss_pred HHHH--cCCCccccC-HHHHHHH
Confidence 1111 224555555 7877643
No 27
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.14 E-value=5.3e-11 Score=96.22 Aligned_cols=101 Identities=9% Similarity=-0.041 Sum_probs=68.4
Q ss_pred CCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-CeeEEEEeCHHHHHHHHhhCC-cccCCCCchhH---
Q 038607 45 APEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-INRALVVSNWEMAKECLTTHD-KVFASRPKTLA--- 119 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvv~~p~~i~~vl~~~~-~~f~~~~~~~~--- 119 (181)
.||+|.++|++|++.+ +++..+.+++ +||+++++.++ +.+.+++++++++++++.++. ..+..++....
T Consensus 2 ~pPGp~~~P~~g~~~~-----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~ 75 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP-----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSA 75 (404)
T ss_dssp ----CCBSSCCCSSTT-----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSH
T ss_pred CCCCCCCCCCCCCcCC-----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccc
Confidence 3666668999999753 5777888886 59999999864 566777899999999997653 22333322211
Q ss_pred H-HHhhcCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 120 M-EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 120 ~-~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
. .....++.+++.++ |+.|+++||+++++++-
T Consensus 76 ~~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~fs~ 108 (404)
T 1jfb_A 76 SGKQAAKAKPTFVDMD-PPEHMHQRSMVEPTFTP 108 (404)
T ss_dssp HHHHHTTSCCCGGGCC-TTHHHHHHTTTGGGGSH
T ss_pred cccchhcccCcccccC-chhHHHHHHHhhhhcCH
Confidence 1 11122335677777 99999999999998863
No 28
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.08 E-value=4.5e-11 Score=97.02 Aligned_cols=95 Identities=8% Similarity=-0.103 Sum_probs=71.1
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh--HHHHhhcCC
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AMEIFGYNF 127 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~--~~~~~~~~~ 127 (181)
+.|++||+..+. .+++..+.+++++|| +++++.+++.+.++++++++++.+. + ...|..+.... ....+. +.
T Consensus 7 g~P~lG~~~~~~--~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~-g~ 81 (417)
T 1izo_A 7 HDKSLDNSLTLL--KEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLF-GV 81 (417)
T ss_dssp BCCCTTHHHHHH--HHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTT-CT
T ss_pred CCCccchHHHHh--hCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhc-cc
Confidence 458999998886 578889999999998 8999998899999999999997544 3 33454332221 111111 22
Q ss_pred cceEeCCCCchHHHHhhhhcccCC
Q 038607 128 SMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 128 ~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
.+++.++ |+.|+++|++++++++
T Consensus 82 ~~l~~~d-g~~h~~~R~~~~~~f~ 104 (417)
T 1izo_A 82 NAIQGMD-GSAHIHRKMLFLSLMT 104 (417)
T ss_dssp TCGGGCC-HHHHHHHHHHHHHTSS
T ss_pred cceeecC-ChHHHHHHHHhhhhcC
Confidence 4677776 9999999999999876
No 29
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.05 E-value=3e-11 Score=99.18 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=66.3
Q ss_pred CCCCCCCCC-cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCch-hHH
Q 038607 43 RRAPEAGGA-WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT-LAM 120 (181)
Q Consensus 43 ~~~P~~p~~-~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~-~~~ 120 (181)
.+.||+|.+ +|++||+.++. .+++..+.+++++||+++++++++.++++++|++++++++.++.. +..++.. ...
T Consensus 17 ~~~pPgp~~~~P~iG~~~~~~--~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~~ 93 (475)
T 3b98_A 17 RNEPPLDKGMIPWLGHALEFG--KDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVLM 93 (475)
T ss_dssp TTCCCEECCSSTTTBTHHHHH--HCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHHH
T ss_pred CCCCCCCCCCcchHHhHHHHh--hCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHHH
Confidence 345554445 89999999886 579999999999999999999999999999999999999975432 3322211 111
Q ss_pred HHhhcCCcceEeCCCCchHHH
Q 038607 121 EIFGYNFSMFGFSPYGSYWRM 141 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~ 141 (181)
... .+.+++.++ |+.||+
T Consensus 94 ~~~--~g~~~~~~~-~~~~R~ 111 (475)
T 3b98_A 94 KRI--FNMILPSHN-PESEKK 111 (475)
T ss_dssp HHT--TCCCCTTCC-HHHHHH
T ss_pred HHH--hCCCCCCCC-hHHHHH
Confidence 111 124655555 777753
No 30
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.04 E-value=1.9e-10 Score=93.24 Aligned_cols=100 Identities=10% Similarity=0.021 Sum_probs=71.4
Q ss_pred cCCCCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEE----e-CC-eeEEEEeCHHHHHHHH-hhCCcccCCC
Q 038607 42 KRRAPEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIK----M-GI-NRALVVSNWEMAKECL-TTHDKVFASR 114 (181)
Q Consensus 42 ~~~~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~----~-~~-~~~vvv~~p~~i~~vl-~~~~~~f~~~ 114 (181)
...+|++|.++|+. +. .+++..+.++ ++||++++++ + ++ .+.++++|++++++++ .++ .|.++
T Consensus 8 ~~~lppgp~~~p~~-----~~--~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~ 77 (406)
T 1ued_A 8 VAPLLREPANFQLR-----TN--CDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTR 77 (406)
T ss_dssp CCCEEECCTTTTCE-----ET--TEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECC
T ss_pred CCCCcccCcccCCC-----CC--CCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccc
Confidence 35567766678876 33 5788899999 9999999999 6 78 8999999999999999 543 24444
Q ss_pred CchhHH--HHh-h-cCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 115 PKTLAM--EIF-G-YNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 115 ~~~~~~--~~~-~-~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
+..... ... . ..+.+++.++ |+.|+++||+++++++-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~R~~~~~~fs~ 118 (406)
T 1ued_A 78 PQFTQSKSGAHVEAQFVGQISTYD-PPEHTRLRKMLTPEFTV 118 (406)
T ss_dssp CCC---------CGGGTTCGGGCC-TTHHHHHHHHHGGGSSH
T ss_pred ccccccccccccccccccccccCC-CHHHHHHHHHhhhhhCH
Confidence 321111 111 0 0124777776 99999999999999863
No 31
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.02 E-value=5.9e-10 Score=91.05 Aligned_cols=86 Identities=15% Similarity=0.123 Sum_probs=65.0
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH-H-Hhh--cCCcceEeCCCCchHH
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM-E-IFG--YNFSMFGFSPYGSYWR 140 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~-~-~~~--~~~~gl~~~~~g~~Wk 140 (181)
..++..+.+|.++||+++++++++.+.++++||+++++++.+ ..+..++..... . ..+ ..+.|++++.+|+.|+
T Consensus 10 ~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~ 87 (456)
T 3mdm_A 10 RVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERWH 87 (456)
T ss_dssp CCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHH
T ss_pred chHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHHH
Confidence 578899999999999999999999999999999999999964 344444322111 1 111 1236777764599999
Q ss_pred HHhhhhcccCCC
Q 038607 141 MAMGRGGEGTDI 152 (181)
Q Consensus 141 ~~Rr~l~pa~~~ 152 (181)
++||+++++++.
T Consensus 88 ~~Rr~~~~~fs~ 99 (456)
T 3mdm_A 88 KQRRVIDLAFSR 99 (456)
T ss_dssp HHHHHHGGGGSH
T ss_pred HHHhhcccccCH
Confidence 999999998764
No 32
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=98.96 E-value=3.2e-10 Score=91.90 Aligned_cols=93 Identities=9% Similarity=-0.035 Sum_probs=69.5
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhc-CCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh--HHHHhhcCCcc
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKC-GPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AMEIFGYNFSM 129 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~--~~~~~~~~~~g 129 (181)
|++||+..+. .+++..+.+++++| |+++++..++.+.++++++++++ ++.+ ...|+.++... ....+ .+.++
T Consensus 8 P~iG~~~~~~--~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~-~~~f~~~~~~~~~~~~~~-~g~~~ 82 (415)
T 3awm_A 8 KGPDETLSLL--ADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYD-TTRFEREGAMPVAIQKTL-LGQGG 82 (415)
T ss_dssp -CCCCHHHHH--HSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTC-TTTEECTTCSCHHHHTTT-SCSSS
T ss_pred CccchHHHHH--hChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhc-ccccccccccchhhhhhc-cCCcc
Confidence 8899998886 57888999999999 79999998888999999999986 6644 34565433221 11111 12246
Q ss_pred eEeCCCCchHHHHhhhhcccCC
Q 038607 130 FGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 130 l~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
++.++ |+.|+++|++++++++
T Consensus 83 l~~~d-g~~h~~~R~~~~~~fs 103 (415)
T 3awm_A 83 VQGLD-GETHRHRKQMFMGLMT 103 (415)
T ss_dssp GGGCC-HHHHHHHHHHHHTTCC
T ss_pred eeecC-cHHHHHHHHHHHHhcC
Confidence 77776 9999999999999886
No 33
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=98.93 E-value=1.4e-09 Score=88.17 Aligned_cols=98 Identities=11% Similarity=-0.015 Sum_probs=67.0
Q ss_pred CCCcceeeecccCCCCCChHHHHHHHHHhc-CCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHh---
Q 038607 49 GGAWPVTGHLHLLGGPEPPHRVLGAMADKC-GPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIF--- 123 (181)
Q Consensus 49 p~~~p~~G~l~~~~~~~~~~~~~~~~~~~y-G~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~--- 123 (181)
|.++|.+.--..+. .+++..+.++ ++| |+++++++ ++.+.++++|++++++++.++. +++++........
T Consensus 10 ~~~~P~~~~~~~~~--~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~ 84 (412)
T 2zbx_A 10 TTDAPAFPSNRSCP--YQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPATSPR 84 (412)
T ss_dssp CCSSCBSSCCCSST--TSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCCCSGG
T ss_pred CCCCCCCCCCchhc--cChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccccccc
Confidence 33566442222333 6789999999 778 99999997 8899999999999999997542 3333220000000
Q ss_pred --hc--CCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 124 --GY--NFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 124 --~~--~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.. .+.+++..+ |+.|+++||+++++++-
T Consensus 85 ~~~~~~~~~~l~~~~-g~~h~~~R~~~~~~fs~ 116 (412)
T 2zbx_A 85 FEAVRESPQAFIGLD-PPEHGTRRRMTISEFTV 116 (412)
T ss_dssp GC----CCCCGGGCC-TTHHHHHHTTTGGGGSH
T ss_pred cccccccccccccCC-cHHHHHHHHHhhhhcCH
Confidence 00 124677776 99999999999998763
No 34
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=98.91 E-value=3.6e-09 Score=85.42 Aligned_cols=85 Identities=12% Similarity=0.083 Sum_probs=65.1
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhH----HHHhhcCCcceEeCCCCchHH
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA----MEIFGYNFSMFGFSPYGSYWR 140 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~----~~~~~~~~~gl~~~~~g~~Wk 140 (181)
.+++..+.++ ++||+++++..++.+.+++++++++++++.++ ..|++++.... .......+++++..+ |+.|+
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h~ 89 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQN-QPDHR 89 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCC-TTHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcC-CchHH
Confidence 5788888888 57999999999999999999999999999865 56766553110 111111236777777 99999
Q ss_pred HHhhhhcccCCC
Q 038607 141 MAMGRGGEGTDI 152 (181)
Q Consensus 141 ~~Rr~l~pa~~~ 152 (181)
++||+++++++-
T Consensus 90 ~~Rr~~~~~fs~ 101 (404)
T 3ejb_B 90 RLRTLASGAFTP 101 (404)
T ss_dssp HHHHHHHGGGSH
T ss_pred HHHHHHHhhcCH
Confidence 999999998763
No 35
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=98.91 E-value=3.4e-10 Score=93.46 Aligned_cols=107 Identities=7% Similarity=-0.067 Sum_probs=71.7
Q ss_pred CCCCCCCCCcceeeecccCC---CCCChHHHHHHHHHhcCC-eeEEEeCCeeE-------EEEeCHHHHHHHHhhCC---
Q 038607 43 RRAPEAGGAWPVTGHLHLLG---GPEPPHRVLGAMADKCGP-IFTIKMGINRA-------LVVSNWEMAKECLTTHD--- 108 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~---~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------vvv~~p~~i~~vl~~~~--- 108 (181)
.+.||+|.++|++|++.++. ...+++.++.++.++||+ ||++++++.++ +++.+++..+.++....
T Consensus 27 ~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k 106 (495)
T 3dsk_A 27 IRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEK 106 (495)
T ss_dssp BCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEEC
T ss_pred CCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccccc
Confidence 34566667999999997763 126899999999999999 99999988877 66777776655553311
Q ss_pred -cccCCCCchhHHHHhhcCC-cceEeCCCCchHHHHhhhhcccCC
Q 038607 109 -KVFASRPKTLAMEIFGYNF-SMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 109 -~~f~~~~~~~~~~~~~~~~-~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
..+........ ...+..+ .+++..+ |+.|+++|+++++++.
T Consensus 107 ~~~~~~~~~~~~-~l~g~~~~~~~~~~~-g~~h~~~R~~~~~~f~ 149 (495)
T 3dsk_A 107 KDLLTGTYMPST-ELTGGYRILSYLDPS-EPKHEKLKNLLFFLLK 149 (495)
T ss_dssp SSCTTSSSCCCG-GGGTTCCCGGGCCTT-SHHHHHHHHHHHHHHH
T ss_pred cccccccCCCCc-cccCCCcceeeeCCC-chHHHHHHHHHHHHHH
Confidence 22211111112 3333221 2444445 9999999999998765
No 36
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=98.89 E-value=1e-09 Score=88.04 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCC----eeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHH
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGI----NRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWR 140 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~----~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk 140 (181)
.+++..+.++ ++||+|+++..++ .++++++|++++++++ ++...|++++...........+.+++..+ |+.|+
T Consensus 12 ~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~ 88 (384)
T 3oo3_A 12 LDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAYD-PPDHT 88 (384)
T ss_dssp TEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCCTTCGGGCC-TTHHH
T ss_pred cChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccccccccccCC-ChhHH
Confidence 6788999999 5899999999876 8999999999999999 45567877664432222222334555666 99999
Q ss_pred HHhhhhcccCCC
Q 038607 141 MAMGRGGEGTDI 152 (181)
Q Consensus 141 ~~Rr~l~pa~~~ 152 (181)
++||+++++++-
T Consensus 89 ~~R~~~~~~fs~ 100 (384)
T 3oo3_A 89 RLRRTVAPAYSA 100 (384)
T ss_dssp HHHHHHGGGGCH
T ss_pred HHHHHHHHhhCH
Confidence 999999998753
No 37
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=98.88 E-value=2.6e-09 Score=86.71 Aligned_cols=83 Identities=8% Similarity=0.079 Sum_probs=64.9
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH-----HHhhcCCcceEeCCCCchH
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM-----EIFGYNFSMFGFSPYGSYW 139 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~-----~~~~~~~~gl~~~~~g~~W 139 (181)
.+++..+.++ ++||+++++++++.+.+++++++++++++.++. |++++..... ......+++++..+ |+.|
T Consensus 20 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h 95 (411)
T 3a4g_A 20 QNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMD-PPDH 95 (411)
T ss_dssp TCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TTHH
T ss_pred cCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCC-chHH
Confidence 5789999999 899999999999999999999999999997642 7665432210 11111346777776 9999
Q ss_pred HHHhhhhcccCC
Q 038607 140 RMAMGRGGEGTD 151 (181)
Q Consensus 140 k~~Rr~l~pa~~ 151 (181)
+++||+++++++
T Consensus 96 ~~~R~~~~~~fs 107 (411)
T 3a4g_A 96 TRLRKLVGRSFT 107 (411)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHhhhhhC
Confidence 999999999876
No 38
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=98.83 E-value=2e-09 Score=86.89 Aligned_cols=85 Identities=15% Similarity=0.074 Sum_probs=63.6
Q ss_pred CChHHHHHHHHHhc--CCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHH
Q 038607 65 EPPHRVLGAMADKC--GPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMA 142 (181)
Q Consensus 65 ~~~~~~~~~~~~~y--G~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~ 142 (181)
.+++..+.+++++| |+++++..++ +.++++|++++++++ ++.+.|++++..........++.+++..+ |+.|+++
T Consensus 19 ~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~ 95 (398)
T 4fb2_A 19 GTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEFELMMAGQD-DPVHKKY 95 (398)
T ss_dssp SSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----CCCTTTTCC-TTHHHHH
T ss_pred cChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcccccCcccCC-chHHHHH
Confidence 68999999999999 9999999875 589999999999999 45567766554322111222224555566 9999999
Q ss_pred hhhhcccCCC
Q 038607 143 MGRGGEGTDI 152 (181)
Q Consensus 143 Rr~l~pa~~~ 152 (181)
||+++++++-
T Consensus 96 R~~~~~~f~~ 105 (398)
T 4fb2_A 96 RQLVAKPFSP 105 (398)
T ss_dssp HHHHHTTTCH
T ss_pred HHHHHHhhCH
Confidence 9999998754
No 39
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=98.83 E-value=4.2e-09 Score=86.01 Aligned_cols=84 Identities=12% Similarity=0.010 Sum_probs=63.2
Q ss_pred CChHHHHHHHHHhcCCeeEEE--------eCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH--------HHhhcCCc
Q 038607 65 EPPHRVLGAMADKCGPIFTIK--------MGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM--------EIFGYNFS 128 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~--------~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~--------~~~~~~~~ 128 (181)
.+++..+.++ ++||+|+++. +|+.+.+++++++++++++.+ ...|++++..... ......+.
T Consensus 37 ~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~~~~ 114 (433)
T 3ivy_A 37 RLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVFSSYENGVIPRFKNDIAREDIEVQRF 114 (433)
T ss_dssp CCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTEESTTTCSCCCCCTTCCHHHHHGGGG
T ss_pred CCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhccCCcccccccccccccccccccccC
Confidence 5689999999 7799999998 444789999999999999954 4567655432211 11222336
Q ss_pred ceEeCCCCchHHHHhhhhcccCC
Q 038607 129 MFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 129 gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
+++..+ |+.|+++||+++++++
T Consensus 115 ~l~~~d-g~~h~~~R~~~~~~fs 136 (433)
T 3ivy_A 115 VMLNMD-APHHTRLRKIISRGFT 136 (433)
T ss_dssp SGGGCC-TTHHHHHHHHHGGGSC
T ss_pred CccccC-hHHHHHHHHHHHHhhC
Confidence 777777 9999999999999875
No 40
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=98.83 E-value=2.4e-09 Score=87.27 Aligned_cols=102 Identities=10% Similarity=0.026 Sum_probs=72.3
Q ss_pred CCCCCCCCCcceeeecccCC--CC-CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCc-h
Q 038607 43 RRAPEAGGAWPVTGHLHLLG--GP-EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK-T 117 (181)
Q Consensus 43 ~~~P~~p~~~p~~G~l~~~~--~~-~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-~ 117 (181)
+++||+ ++|++.... .. .+++..+.++++ ||+|++++. |+.+.+++++++++++++.+ ...|++++. .
T Consensus 5 ~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~-~~~fs~r~~~~ 77 (428)
T 1cpt_A 5 ATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQ-PGLFSNAEGSE 77 (428)
T ss_dssp CCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHC-TTTEESSSSCS
T ss_pred cccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcC-chhccCccccc
Confidence 455555 789865442 11 247778888877 799999997 67899999999999999964 456776654 2
Q ss_pred hH----H-H-H---hh---cCCcceEeCCCCchHHHHhhhhcccCCC
Q 038607 118 LA----M-E-I---FG---YNFSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 118 ~~----~-~-~---~~---~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
.. . . . .+ ..+++++.++ |+.|+++||+++++++-
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~~~fs~ 123 (428)
T 1cpt_A 78 ILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTAYRGLTLNWFQP 123 (428)
T ss_dssp SCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHHHHHHHHTTSSH
T ss_pred cCCcccccchhccccccccccccccccCC-hHHHHHHHHHhhhhhCH
Confidence 11 1 1 2 22 1125777777 99999999999998863
No 41
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=98.82 E-value=2.5e-09 Score=86.60 Aligned_cols=96 Identities=16% Similarity=0.149 Sum_probs=68.6
Q ss_pred CCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEe-CCee-EEEEeCHHHHHHHHhhCCcccCCCCchhHHH--
Q 038607 46 PEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKM-GINR-ALVVSNWEMAKECLTTHDKVFASRPKTLAME-- 121 (181)
Q Consensus 46 P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~-~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~-- 121 (181)
|++| ++|+.++ .. .+++..+.+++ +||+++++.+ ++.+ .++++|++++++++.+ ..|.+++......
T Consensus 11 ~~~~-~~p~~~~---~~--~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 11 PPVR-DWPAVDL---PG--SDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTR 81 (406)
T ss_dssp CCEE-ECCCCCC---CT--TCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCB
T ss_pred cCCC-CCCCCcc---cc--cCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCccc
Confidence 3343 5677666 22 57888888885 7999999996 5666 9999999999999975 3576554321110
Q ss_pred --H-hhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 122 --I-FGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 122 --~-~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
. ....+++++.++ |+.|+++||+++++++
T Consensus 82 ~~~~~~~~~~~l~~~d-g~~h~~~R~~~~~~fs 113 (406)
T 1s1f_A 82 LAPHFIPARGAVGFLD-PPDHTRLRRSVAAAFT 113 (406)
T ss_dssp SSSSCSSCTTSGGGCC-TTHHHHHHHHHHHHHS
T ss_pred ccccccccccccccCC-chHHHHHHHHHHHhhC
Confidence 0 111246888877 9999999999999875
No 42
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=98.81 E-value=9.1e-09 Score=83.18 Aligned_cols=82 Identities=15% Similarity=0.121 Sum_probs=64.2
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCch--h-----------H-HHH-hhcCCcc
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT--L-----------A-MEI-FGYNFSM 129 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~--~-----------~-~~~-~~~~~~g 129 (181)
.+++..+.++ ++||+++++++++.+.+++++++++++++.++ .|++++.. . . ... ... +++
T Consensus 14 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 89 (404)
T 1z8o_A 14 VDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYF-ATN 89 (404)
T ss_dssp SSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHH-SSS
T ss_pred cCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhc-ccc
Confidence 5799999999 89999999999999999999999999999765 56555422 1 1 111 011 367
Q ss_pred eEeCCCCchHHHHhhhhcccCC
Q 038607 130 FGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 130 l~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
++..+ |+.|+++||+++++++
T Consensus 90 l~~~~-g~~h~~~R~~~~~~fs 110 (404)
T 1z8o_A 90 MGTSD-PPTHTRLRKLVSQEFT 110 (404)
T ss_dssp GGGCC-TTHHHHHHHHHHTTSC
T ss_pred cccCC-CcHHHHHHHHHHHhhC
Confidence 77776 9999999999999876
No 43
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=98.79 E-value=4.6e-09 Score=85.05 Aligned_cols=84 Identities=8% Similarity=-0.095 Sum_probs=60.8
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCc---hh----HHHHhhcCCcceEeCCCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK---TL----AMEIFGYNFSMFGFSPYG 136 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~---~~----~~~~~~~~~~gl~~~~~g 136 (181)
.+++..+.++ ++||+++++++ ++.+.++++|++++++++.++. +.+++. +. ........+.+++..+ |
T Consensus 24 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g 99 (408)
T 3abb_A 24 YQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVD-D 99 (408)
T ss_dssp TSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCC-T
T ss_pred cCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCC-c
Confidence 6788999999 89999999997 7899999999999999997532 333321 11 1110000124676766 9
Q ss_pred chHHHHhhhhcccCCC
Q 038607 137 SYWRMAMGRGGEGTDI 152 (181)
Q Consensus 137 ~~Wk~~Rr~l~pa~~~ 152 (181)
+.|+++||+++++++-
T Consensus 100 ~~h~~~R~~~~~~fs~ 115 (408)
T 3abb_A 100 PVHARQRRMLIPSFGV 115 (408)
T ss_dssp THHHHHHHHHGGGGCH
T ss_pred hHHHHHHHHhhhhcCH
Confidence 9999999999998753
No 44
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=98.78 E-value=3e-09 Score=86.19 Aligned_cols=80 Identities=15% Similarity=0.018 Sum_probs=60.0
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHhh
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAMG 144 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr 144 (181)
.+++..+.++++ ||++ +.++.+.++++|++++++++.+. ..|++++.... ......+.+++..+ |+.|+++||
T Consensus 28 ~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~~~~~~~~~~-g~~~~~~R~ 100 (411)
T 2jjn_A 28 TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI-EGASPTPGMIHEID-PPEHRALRK 100 (411)
T ss_dssp HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS-TTCCCCTTCGGGCC-TTHHHHHHH
T ss_pred cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC-CcccccccccccCC-chHHHHHHH
Confidence 468888888876 9998 56767899999999999999754 46776653221 11112345777776 999999999
Q ss_pred hhcccCC
Q 038607 145 RGGEGTD 151 (181)
Q Consensus 145 ~l~pa~~ 151 (181)
+++++++
T Consensus 101 ~~~~~fs 107 (411)
T 2jjn_A 101 VVSSAFT 107 (411)
T ss_dssp HHHHHSC
T ss_pred HhhhhcC
Confidence 9999875
No 45
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=98.75 E-value=4.4e-09 Score=85.56 Aligned_cols=83 Identities=10% Similarity=-0.050 Sum_probs=62.9
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCch-hHHHHh-h-cCCcceEeCCCCchHH
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKT-LAMEIF-G-YNFSMFGFSPYGSYWR 140 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~-~~~~~~-~-~~~~gl~~~~~g~~Wk 140 (181)
.+++..+.++ ++||+++++++ ++.+.++++|++++++++.++ .|.+++.. .....+ . ..+++++..+ |+.|+
T Consensus 37 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~ 112 (417)
T 2y5n_A 37 LTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMD-PPEHS 112 (417)
T ss_dssp CCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCC-TTHHH
T ss_pred cCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCC-chHHH
Confidence 5788999999 89999999997 789999999999999999753 45544322 100001 1 1246777776 99999
Q ss_pred HHhhhhcccCC
Q 038607 141 MAMGRGGEGTD 151 (181)
Q Consensus 141 ~~Rr~l~pa~~ 151 (181)
++||+++++++
T Consensus 113 ~~R~~l~~~fs 123 (417)
T 2y5n_A 113 RLRRLVVKAFT 123 (417)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHhhhcC
Confidence 99999999875
No 46
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=98.74 E-value=1.2e-08 Score=82.85 Aligned_cols=105 Identities=6% Similarity=-0.025 Sum_probs=71.3
Q ss_pred cccCCCCCCCCCccee--eecccCCC---CCChHHHHHHHHHhcC--CeeEEE-eCCeeEEEEeCHHHHHHHHhhCCccc
Q 038607 40 KKKRRAPEAGGAWPVT--GHLHLLGG---PEPPHRVLGAMADKCG--PIFTIK-MGINRALVVSNWEMAKECLTTHDKVF 111 (181)
Q Consensus 40 ~~~~~~P~~p~~~p~~--G~l~~~~~---~~~~~~~~~~~~~~yG--~v~~~~-~~~~~~vvv~~p~~i~~vl~~~~~~f 111 (181)
.+..++|++|.+.|.. +.+-.+.. ..+++..+.+++ +|| +++++. ++ +.++++|++++++++.+ ...|
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHC-TTTE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC-cccc
Confidence 3556788877777754 54322111 146888898885 799 999998 55 68999999999999964 4567
Q ss_pred CCCC-chhHHHHhhcCCcc-eEeCCCCchHHHHhhhhcccCC
Q 038607 112 ASRP-KTLAMEIFGYNFSM-FGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 112 ~~~~-~~~~~~~~~~~~~g-l~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
++++ ...... ... +.+ ++.++ |+.|+++||+++++++
T Consensus 83 ~~~~~~~~~~~-~~~-~~~~l~~~~-g~~~~~~R~~~~~~f~ 121 (415)
T 2zwu_A 83 SSECPFIPREA-GEA-YDFIPTSMD-PPEQRQFRALANQVVG 121 (415)
T ss_dssp ETTSCSSSHHH-HHH-CCCTTTTCC-TTTTHHHHHHHHHHHS
T ss_pred CCCcccCCCCc-ccc-ccccCccCC-CcHHHHHHHHHHhhhC
Confidence 7665 222221 111 256 77776 9999999999998875
No 47
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=98.68 E-value=8.2e-09 Score=83.49 Aligned_cols=84 Identities=8% Similarity=0.041 Sum_probs=62.8
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCc--h-hHHHHh-h-cCCcceEeCCCCch
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK--T-LAMEIF-G-YNFSMFGFSPYGSY 138 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~--~-~~~~~~-~-~~~~gl~~~~~g~~ 138 (181)
.+++..+.++ ++||+++++++ ++.+.++++|++++++++.++ .|.+++. . ...... . ..+.+++..+ |+.
T Consensus 19 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~ 94 (403)
T 3aba_A 19 FLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQD-EPE 94 (403)
T ss_dssp TSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCC-TTH
T ss_pred cChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCC-chh
Confidence 5678888899 88999999997 789999999999999999763 4655531 1 100001 1 1246777776 999
Q ss_pred HHHHhhhhcccCCC
Q 038607 139 WRMAMGRGGEGTDI 152 (181)
Q Consensus 139 Wk~~Rr~l~pa~~~ 152 (181)
|+++||+++++++-
T Consensus 95 h~~~R~~~~~~fs~ 108 (403)
T 3aba_A 95 HTSDRKLLAKEFTV 108 (403)
T ss_dssp HHHHHHHHHHHSCH
T ss_pred HHHHHHHHHhhcCH
Confidence 99999999998753
No 48
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=98.66 E-value=2.2e-08 Score=81.02 Aligned_cols=84 Identities=17% Similarity=0.029 Sum_probs=62.4
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc--hhH-HHH------hh-cCCcceEeCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK--TLA-MEI------FG-YNFSMFGFSP 134 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~--~~~-~~~------~~-~~~~gl~~~~ 134 (181)
.+++..+.++ ++||+++++++++.+.++++|++++++++.++. +++++. +.. ... .+ ..+.+++..+
T Consensus 15 ~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 91 (408)
T 1odo_A 15 ADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAY 91 (408)
T ss_dssp TTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCC
T ss_pred CChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccccccC
Confidence 6799999999 999999999988899999999999999997543 333321 110 011 00 0125777776
Q ss_pred CCchHHHHhhhhcccCCC
Q 038607 135 YGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 135 ~g~~Wk~~Rr~l~pa~~~ 152 (181)
|+.|+++||+++++++-
T Consensus 92 -g~~h~~~R~~~~~~fs~ 108 (408)
T 1odo_A 92 -GPNHRKLRRLVAPAFSA 108 (408)
T ss_dssp -HHHHHHHHHTTGGGGSH
T ss_pred -ChHHHHHHHHhhhhcCH
Confidence 99999999999998863
No 49
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=98.65 E-value=1.5e-08 Score=82.28 Aligned_cols=84 Identities=15% Similarity=0.064 Sum_probs=63.0
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-------HHHHhh--cCCcc-eEeC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTL-------AMEIFG--YNFSM-FGFS 133 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-------~~~~~~--~~~~g-l~~~ 133 (181)
.+++..+.+++ +||+++++++ ++.+.+++++++++++++.++ .|++++... ...... .++.+ ++..
T Consensus 22 ~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (413)
T 2z36_A 22 FAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGM 98 (413)
T ss_dssp TBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGC
T ss_pred cCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcccccccccccccccccccccccc
Confidence 57888999987 6899999997 789999999999999999763 465554211 111110 01367 7777
Q ss_pred CCCchHHHHhhhhcccCCC
Q 038607 134 PYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 134 ~~g~~Wk~~Rr~l~pa~~~ 152 (181)
+ |+.|+++||+++++++-
T Consensus 99 ~-g~~h~~~R~~~~~~fs~ 116 (413)
T 2z36_A 99 D-GAEHSAARRPVIGEFTV 116 (413)
T ss_dssp C-HHHHHHHHHHHHGGGSH
T ss_pred C-chHHHHHHHHHHHhhCH
Confidence 6 99999999999998753
No 50
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=98.64 E-value=1.7e-08 Score=81.86 Aligned_cols=84 Identities=13% Similarity=0.048 Sum_probs=63.9
Q ss_pred CChHHHHHHHHHhcCCeeEEEeC-CeeEEEEeCHHHHHHHHhhCCcccCCCCch---h-HHHHh---hcCCcceEeCCCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMG-INRALVVSNWEMAKECLTTHDKVFASRPKT---L-AMEIF---GYNFSMFGFSPYG 136 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~---~-~~~~~---~~~~~gl~~~~~g 136 (181)
.+++..+.+++++ |+|++++++ |.+.+++++++++++++.++ .|+.++.. . ..... +..+.+++..+ |
T Consensus 29 ~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 104 (417)
T 3tyw_A 29 FAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD-A 104 (417)
T ss_dssp TSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC-H
T ss_pred cCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC-C
Confidence 6888999999998 999999986 58999999999999999765 56554211 1 11111 12346777777 9
Q ss_pred chHHHHhhhhcccCCC
Q 038607 137 SYWRMAMGRGGEGTDI 152 (181)
Q Consensus 137 ~~Wk~~Rr~l~pa~~~ 152 (181)
+.|+++||+++++++-
T Consensus 105 ~~h~~~R~~~~~~fs~ 120 (417)
T 3tyw_A 105 PEHTRYRRMLLPAFTV 120 (417)
T ss_dssp HHHHHHHHHHGGGGCH
T ss_pred cHHHHHHHHHHhhhCH
Confidence 9999999999998753
No 51
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=98.63 E-value=1.7e-08 Score=82.58 Aligned_cols=84 Identities=8% Similarity=-0.018 Sum_probs=62.4
Q ss_pred ChHHHHHHHHHhcCCeeEEEeC-------CeeEEEEeCHHHHHHHHhhCCcccCCCCch--h-HHHHhhcCCcceEeCCC
Q 038607 66 PPHRVLGAMADKCGPIFTIKMG-------INRALVVSNWEMAKECLTTHDKVFASRPKT--L-AMEIFGYNFSMFGFSPY 135 (181)
Q Consensus 66 ~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~--~-~~~~~~~~~~gl~~~~~ 135 (181)
+++..+.+++ +||+|+++..+ +.+.++++|++++++++.++ ..|++++.. . ....++..+++++.++
T Consensus 45 ~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d- 121 (435)
T 2wm5_A 45 VRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD- 121 (435)
T ss_dssp HHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC-
T ss_pred ChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC-
Confidence 5677888885 68999999976 66899999999999999864 467666421 1 1111111136788887
Q ss_pred CchHHHHhhhhcccCCC
Q 038607 136 GSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 136 g~~Wk~~Rr~l~pa~~~ 152 (181)
|+.|+++||+++++++-
T Consensus 122 g~~h~~~R~~l~~~fs~ 138 (435)
T 2wm5_A 122 DPRHQRLRSIVSRAFTP 138 (435)
T ss_dssp TTHHHHHHHHHHHTCCH
T ss_pred cHHHHHHHHHhHHhhCH
Confidence 99999999999998753
No 52
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=98.61 E-value=2.3e-08 Score=80.98 Aligned_cols=82 Identities=12% Similarity=0.043 Sum_probs=62.3
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-HHHHhhcCCcc--eEeCCCC----
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPKTL-AMEIFGYNFSM--FGFSPYG---- 136 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~~~~~~~~~~g--l~~~~~g---- 136 (181)
.+++..+.++ ++||+++++++ ++.+.++++|++++++++.++ .|.+++... ...... .+.+ ++.++ |
T Consensus 26 ~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~-g~~~~ 100 (404)
T 2xbk_A 26 LKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISD-ADAES 100 (404)
T ss_dssp TBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBC-SCHHH
T ss_pred cCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeC-CCCCC
Confidence 5688899999 88999999997 789999999999999999753 365544321 111111 1245 77776 9
Q ss_pred --chHHHHhhhhcccCC
Q 038607 137 --SYWRMAMGRGGEGTD 151 (181)
Q Consensus 137 --~~Wk~~Rr~l~pa~~ 151 (181)
+.|+++||+++++++
T Consensus 101 ~~~~h~~~R~~~~~~fs 117 (404)
T 2xbk_A 101 GRRQHAETRRLLTPLFS 117 (404)
T ss_dssp HHHHHHHHHHHHGGGGC
T ss_pred CCchHHHHHHHhhhhcC
Confidence 999999999999875
No 53
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=98.60 E-value=3.6e-08 Score=80.29 Aligned_cols=84 Identities=8% Similarity=0.006 Sum_probs=62.4
Q ss_pred CChHHHHHHHHHhcCCeeEEEeC--CeeEEEEeCHHHHHHHHhhCCcccCCCCch--------h-H-HH----HhhcCCc
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMG--INRALVVSNWEMAKECLTTHDKVFASRPKT--------L-A-ME----IFGYNFS 128 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~--~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~--------~-~-~~----~~~~~~~ 128 (181)
.+++..+.++++ ||+++++++| +.+.++++|++++++++.++ .|++++.. . . .. ....+++
T Consensus 20 ~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 467888888865 9999999987 67899999999999999764 67665431 0 0 00 1112236
Q ss_pred ceEeCCCCchHHHHhhhhcccCCC
Q 038607 129 MFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 129 gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
+++.++ |+.|+++||+++++++-
T Consensus 97 ~l~~~d-g~~h~~~R~~~~~~fs~ 119 (425)
T 2z3t_A 97 WLVFLD-PPHHTELRSLLTTEFSP 119 (425)
T ss_dssp CGGGCC-HHHHHHHHHHHHGGGSH
T ss_pred ccccCC-chHHHHHHHHHHHhhCH
Confidence 788887 99999999999998763
No 54
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=98.59 E-value=1.1e-07 Score=77.18 Aligned_cols=84 Identities=15% Similarity=0.083 Sum_probs=62.4
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCC-chhHHH---------Hhh-cC-CcceE
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRP-KTLAME---------IFG-YN-FSMFG 131 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~-~~~~~~---------~~~-~~-~~gl~ 131 (181)
.+++..+.++ ++||+++++++ ++.+.++++|++++++++.++. +.+++ .+.... .++ .. +.+++
T Consensus 17 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 93 (411)
T 1gwi_A 17 TDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSML 93 (411)
T ss_dssp SCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGG
T ss_pred CChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccc
Confidence 6799999999 89999999997 8899999999999999997543 33332 111100 000 01 35777
Q ss_pred eCCCCchHHHHhhhhcccCCC
Q 038607 132 FSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 132 ~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
..+ |+.|+++||+++++++-
T Consensus 94 ~~~-g~~h~~~R~~~~~~fs~ 113 (411)
T 1gwi_A 94 TVD-GAEHRRLRTLVAQALTV 113 (411)
T ss_dssp GCC-HHHHHHHHHHHTTTSCH
T ss_pred cCC-cHHHHHHHHHHHHhcCH
Confidence 776 99999999999998764
No 55
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=98.59 E-value=4.1e-08 Score=79.73 Aligned_cols=83 Identities=12% Similarity=0.013 Sum_probs=62.5
Q ss_pred CChHHHHHHHHHhcCCee-----EEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh--HH-HHh-h-cCCcceEeCC
Q 038607 65 EPPHRVLGAMADKCGPIF-----TIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AM-EIF-G-YNFSMFGFSP 134 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~-----~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~--~~-~~~-~-~~~~gl~~~~ 134 (181)
.+++..+.+++ +||+++ ++.. .+.++++|++++++++.++ ..|++++... .. ..+ + ..+++++.++
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD 100 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence 57888888885 689998 7765 6799999999999999865 5676665331 11 122 2 3347888886
Q ss_pred CCchHHHHhhhhcccCCC
Q 038607 135 YGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 135 ~g~~Wk~~Rr~l~pa~~~ 152 (181)
|+.|+++||+++++++-
T Consensus 101 -g~~h~~~R~~~~~~fs~ 117 (414)
T 2uuq_A 101 -PPVHTEFRKLVSRGFTP 117 (414)
T ss_dssp -TTHHHHHHHHHHTTSSH
T ss_pred -chhHHHHHHHhhhhcCH
Confidence 99999999999998763
No 56
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=98.58 E-value=1.8e-08 Score=81.06 Aligned_cols=83 Identities=6% Similarity=-0.096 Sum_probs=62.3
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHhh
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAMG 144 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr 144 (181)
.+++..+.+++++ |+|+++..++ +.++++|++++++++.+ .+.|++++...........+.+++..+ |+.|+++||
T Consensus 24 ~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~-g~~h~~~R~ 99 (396)
T 3oft_A 24 QDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGD-AERLSSQCLAVTPGLGKVMQFIPLQQD-GAEHKAFRT 99 (396)
T ss_dssp TCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHC-TTTEESTTCCSSTTHHHHHCCTTTTCC-HHHHHHHHH
T ss_pred cChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcC-cccccCCcccCCCccccccccCccccC-CcHHHHHHH
Confidence 6899999999998 9999998774 48889999999999954 457766653221111111224666666 999999999
Q ss_pred hhcccCC
Q 038607 145 RGGEGTD 151 (181)
Q Consensus 145 ~l~pa~~ 151 (181)
+++++++
T Consensus 100 ~~~~~f~ 106 (396)
T 3oft_A 100 PVMKGLA 106 (396)
T ss_dssp HHHHHTC
T ss_pred HhhhhhC
Confidence 9999875
No 57
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=98.54 E-value=4.5e-08 Score=79.51 Aligned_cols=85 Identities=9% Similarity=-0.071 Sum_probs=62.5
Q ss_pred CChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHh
Q 038607 65 EPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAM 143 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~R 143 (181)
.+++..+.++++++| +|+++..++ +.++++|++++++++. +.+.|++++...........+.+++..+ |+.|+++|
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~R 114 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPYR 114 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHHH
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCccCC-cHHHHHHH
Confidence 478889988887655 899998766 4888999999999994 5567766653222222222335667776 99999999
Q ss_pred hhhcccCCC
Q 038607 144 GRGGEGTDI 152 (181)
Q Consensus 144 r~l~pa~~~ 152 (181)
|+++++++-
T Consensus 115 ~~~~~~fs~ 123 (421)
T 3lxh_A 115 KAIDKGLNL 123 (421)
T ss_dssp HHHHHHHSH
T ss_pred HHHhhhcCH
Confidence 999988653
No 58
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=98.53 E-value=3.6e-08 Score=80.07 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=61.4
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc-----hh-H--HHHhhcC-CcceEeCCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-----TL-A--MEIFGYN-FSMFGFSPY 135 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-----~~-~--~~~~~~~-~~gl~~~~~ 135 (181)
.+++..+.++ ++||++++ + ++.+.+++++++++++++.++. |++++. .. . ...++.. +++++..+
T Consensus 26 ~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 99 (419)
T 1q5d_A 26 EDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP- 99 (419)
T ss_dssp TCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC-
T ss_pred hChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC-
Confidence 5789999998 68999998 5 7788999999999999997653 876651 11 1 0111111 35677776
Q ss_pred CchHHHHhhhhcccCCC
Q 038607 136 GSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 136 g~~Wk~~Rr~l~pa~~~ 152 (181)
|+.|+++||+++++++-
T Consensus 100 g~~h~~~R~~~~~~fs~ 116 (419)
T 1q5d_A 100 PEDHARVRKLVNPSFTS 116 (419)
T ss_dssp HHHHHHHHHHHGGGGSH
T ss_pred chHHHHHHHHHHHhcCH
Confidence 99999999999998853
No 59
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=98.52 E-value=6e-08 Score=78.85 Aligned_cols=85 Identities=12% Similarity=-0.101 Sum_probs=62.2
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCC--eeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhh---cC-CcceEeCCCCch
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGI--NRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFG---YN-FSMFGFSPYGSY 138 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~--~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~---~~-~~gl~~~~~g~~ 138 (181)
.+++..+.++++ ||+|+++...| .+.+++++++++++++. +...|++++......... .. +.+++..+ |+.
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~-~~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 113 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLA-PSAPLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HEQ 113 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSC-TTSSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHh-ChhhhcCCccccccccccccccccCCCccccC-cHH
Confidence 478999988887 99999987445 78999999999999994 445676654332211110 01 35677776 999
Q ss_pred HHHHhhhhcccCCC
Q 038607 139 WRMAMGRGGEGTDI 152 (181)
Q Consensus 139 Wk~~Rr~l~pa~~~ 152 (181)
|+++||+++++++-
T Consensus 114 h~~~R~~~~~~fs~ 127 (415)
T 3mgx_A 114 HRKLRKLVGPLLSR 127 (415)
T ss_dssp HHHHHHHHGGGSSH
T ss_pred HHHHHHHhHhhhCH
Confidence 99999999998753
No 60
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=98.51 E-value=1.4e-07 Score=76.30 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=59.1
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHH-Hhh-------cCCcceEeCCCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAME-IFG-------YNFSMFGFSPYG 136 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~-~~~-------~~~~gl~~~~~g 136 (181)
.+++..+.++ ++||+|+++..+ .+++++++++++++.+ ...+++++...... ..+ ..+++++.++ |
T Consensus 29 ~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 102 (418)
T 3r9b_A 29 ADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRH-PSSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD-P 102 (418)
T ss_dssp TCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHC-TTEECCGGGCHHHHHHHC---------CCCGGGCC-T
T ss_pred cCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcC-cccccCcccccccccccccccccccccccchhhcC-C
Confidence 6889999888 568999987765 8999999999999965 33444444322211 111 1336777787 9
Q ss_pred chHHHHhhhhcccCC
Q 038607 137 SYWRMAMGRGGEGTD 151 (181)
Q Consensus 137 ~~Wk~~Rr~l~pa~~ 151 (181)
+.|+++||+++++++
T Consensus 103 ~~h~~~R~~~~~~fs 117 (418)
T 3r9b_A 103 PDHTRLRGLVSKAFA 117 (418)
T ss_dssp THHHHHHHHHHGGGS
T ss_pred chHHHHHHHhhhhhC
Confidence 999999999999875
No 61
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=98.49 E-value=3.9e-08 Score=80.46 Aligned_cols=109 Identities=8% Similarity=-0.064 Sum_probs=66.1
Q ss_pred ccCCCCCCCCCcceeeecccCC---CCC-ChHHHHHHHHHhcCC-eeEEEeCCe-------eEEEEeCHHHHHHHHhh--
Q 038607 41 KKRRAPEAGGAWPVTGHLHLLG---GPE-PPHRVLGAMADKCGP-IFTIKMGIN-------RALVVSNWEMAKECLTT-- 106 (181)
Q Consensus 41 ~~~~~P~~p~~~p~~G~l~~~~---~~~-~~~~~~~~~~~~yG~-v~~~~~~~~-------~~vvv~~p~~i~~vl~~-- 106 (181)
..+.+|++ .++|++|++.++. ... +++.++.++.++||+ ||++++++. ..+++++.+..+.++..
T Consensus 7 Pl~~iPGp-~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~ 85 (473)
T 3dan_A 7 PLREIPGS-YGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSK 85 (473)
T ss_dssp CBCCCCCC-CCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCC-CCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcc
Confidence 44555555 5899999998752 014 788999999999999 999998643 34444555544344321
Q ss_pred --CCcccCCCCchhHHHHhhcC-CcceEeCCCCchHHHHhhhhcccCCC
Q 038607 107 --HDKVFASRPKTLAMEIFGYN-FSMFGFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 107 --~~~~f~~~~~~~~~~~~~~~-~~gl~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
+...+....... ....+.. ..+++..+ |+.|+++||+++++++-
T Consensus 86 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~h~~~R~~~~~~f~~ 132 (473)
T 3dan_A 86 VEKKDLFTGTYMPS-TKLTGGYRVLSYLDPS-EPRHAQLKNLLFFMLKN 132 (473)
T ss_dssp EECSSCTTSSSCCC-GGGGTTSCCGGGCCTT-SHHHHHHHHHHHHHHHH
T ss_pred eeccccccccccCC-ccccCCCcceeeeCCC-cHHHHHHHHHHHHHHHH
Confidence 111221111111 1222211 23445555 99999999999987653
No 62
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=98.47 E-value=9.3e-08 Score=77.59 Aligned_cols=83 Identities=12% Similarity=0.116 Sum_probs=60.8
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCC--eeEEEEeCHHHHHHHHhhCCcccCCCCchhH----H-HHhhcCCcceEeCCCCc
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGI--NRALVVSNWEMAKECLTTHDKVFASRPKTLA----M-EIFGYNFSMFGFSPYGS 137 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~--~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~----~-~~~~~~~~gl~~~~~g~ 137 (181)
.+++..+.+++ +||+++++.+++ .+.+++++++++++++.+ ..|.+++.... . ...+..+++++..+ |+
T Consensus 27 ~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 102 (411)
T 2dkk_A 27 PEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFAD-QP 102 (411)
T ss_dssp SCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCC-TT
T ss_pred ccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCC-ch
Confidence 56778888887 799999999754 789999999999999965 35654432210 0 11111046777776 99
Q ss_pred hHHHHhhhhcccCC
Q 038607 138 YWRMAMGRGGEGTD 151 (181)
Q Consensus 138 ~Wk~~Rr~l~pa~~ 151 (181)
.|+++||+++++++
T Consensus 103 ~h~~~R~~~~~~fs 116 (411)
T 2dkk_A 103 DHNRLRRAVAGAFT 116 (411)
T ss_dssp HHHHHHHHHGGGSS
T ss_pred HHHHHHHHhhHhhC
Confidence 99999999999876
No 63
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=98.46 E-value=6.6e-08 Score=79.31 Aligned_cols=83 Identities=11% Similarity=0.003 Sum_probs=60.8
Q ss_pred hHHHHHHHHHhcCCee--EEE-eCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHH----------HHhh---cCCcce
Q 038607 67 PHRVLGAMADKCGPIF--TIK-MGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM----------EIFG---YNFSMF 130 (181)
Q Consensus 67 ~~~~~~~~~~~yG~v~--~~~-~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~----------~~~~---~~~~gl 130 (181)
++..+.++ ++||+|+ ++. .++.+.+++++++++++++.+. ..|++++..... ...+ ..++++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 66777777 6689999 888 6778999999999999999654 667666532110 0110 022467
Q ss_pred EeCCCCchHHHHhhhhcccCCC
Q 038607 131 GFSPYGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 131 ~~~~~g~~Wk~~Rr~l~pa~~~ 152 (181)
+..+ |++|+++||+++++++-
T Consensus 125 ~~~d-g~~h~~~R~~~~~~fs~ 145 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQDWFMP 145 (450)
T ss_dssp GGCC-TTHHHHHHHHHHTTTSH
T ss_pred ccCC-CHHHHHHHHHhhhhhCH
Confidence 7777 99999999999998764
No 64
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=98.45 E-value=1.7e-07 Score=75.54 Aligned_cols=78 Identities=9% Similarity=0.015 Sum_probs=59.5
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHhh
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAMG 144 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr 144 (181)
.+++..+.++++ ||+|+++. . +.+++++++++++++.++ ..|++++... .... .+++++..+ |+.|+++||
T Consensus 18 ~~p~~~~~~l~~-~Gpv~~~~--~-~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R~ 88 (398)
T 2xkr_A 18 REARAAYRWMRA-NQPVFRDR--N-GLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRRK 88 (398)
T ss_dssp TTHHHHHHHHHH-HCSEEECT--T-CCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHHH
T ss_pred cChhHHHHHHHh-cCCeeecC--C-CeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--ccccccccC-chHHHHHHH
Confidence 678899999987 99998654 3 789999999999999754 3676664322 1111 236777777 999999999
Q ss_pred hhcccCC
Q 038607 145 RGGEGTD 151 (181)
Q Consensus 145 ~l~pa~~ 151 (181)
+++++++
T Consensus 89 ~~~~~fs 95 (398)
T 2xkr_A 89 LVNAGFT 95 (398)
T ss_dssp HHGGGSC
T ss_pred HhhhhhC
Confidence 9999876
No 65
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=98.39 E-value=2.2e-07 Score=74.76 Aligned_cols=82 Identities=13% Similarity=0.045 Sum_probs=58.8
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh-HH------HHhhcCCcceEeCCCCc
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL-AM------EIFGYNFSMFGFSPYGS 137 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~-~~------~~~~~~~~gl~~~~~g~ 137 (181)
.+++..+.++ ++||++++ + +.+.++++|++++++++.+ ..|.+++... .. ...+..+++++.++ |+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-EP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-TT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCC-ch
Confidence 3677778766 58999998 6 5789999999999999975 3565443221 10 11111136777777 99
Q ss_pred hHHHHhhhhcccCCCC
Q 038607 138 YWRMAMGRGGEGTDIP 153 (181)
Q Consensus 138 ~Wk~~Rr~l~pa~~~~ 153 (181)
.|+++||+++++++-.
T Consensus 86 ~h~~~R~~~~~~fs~~ 101 (397)
T 3buj_A 86 DHGRLRGVVGPAFSPS 101 (397)
T ss_dssp HHHHHHHHHGGGSSTT
T ss_pred hHHHHHHHHHHhcCHH
Confidence 9999999999998743
No 66
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=98.32 E-value=7.4e-07 Score=71.02 Aligned_cols=78 Identities=15% Similarity=0.065 Sum_probs=55.5
Q ss_pred HHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc--h-hHHH----H--hhc-CCcceEeCCCCc
Q 038607 68 HRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK--T-LAME----I--FGY-NFSMFGFSPYGS 137 (181)
Q Consensus 68 ~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~--~-~~~~----~--~~~-~~~gl~~~~~g~ 137 (181)
+..+.++ ++||+++++ + +.+++++++++++++.+ ...|++++. . .... . .+. .|++++.++ |+
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~ 74 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNN-FSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-PP 74 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHC-TTTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-TT
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcC-cccccccccccccccccccccccccccccccccccCC-Ch
Confidence 4556666 589999987 4 58899999999999976 446777653 1 1111 1 111 125777777 99
Q ss_pred hHHHHhhhhcccCCC
Q 038607 138 YWRMAMGRGGEGTDI 152 (181)
Q Consensus 138 ~Wk~~Rr~l~pa~~~ 152 (181)
.|+++||+++++++-
T Consensus 75 ~h~~~R~~~~~~f~~ 89 (368)
T 1io7_A 75 LHDELRSMSADIFSP 89 (368)
T ss_dssp HHHHHHGGGTTTTCH
T ss_pred HHHHHHHHHHhhcCH
Confidence 999999999998753
No 67
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=98.31 E-value=8.8e-08 Score=78.41 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=48.9
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHhh
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAMG 144 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr 144 (181)
.++...+.++ ++||+|+++..++ .+++++++++++++.+.. .|++++........ .++.+++..+ |+.|+++||
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~-~~~~~l~~~d-g~~h~~~Rr 126 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPV-MRGPVLAQMH-GKEHSAKRR 126 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCS-CC--------------CCHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccc-cCCCccccCC-cHHHHHHHH
Confidence 4566677666 6799999987666 899999999999997654 47665433221111 1223577776 999999999
Q ss_pred hhcccCCC
Q 038607 145 RGGEGTDI 152 (181)
Q Consensus 145 ~l~pa~~~ 152 (181)
+++++++-
T Consensus 127 ~~~~~fs~ 134 (441)
T 3nc3_A 127 IVVRSFIG 134 (441)
T ss_dssp HHHHHHHH
T ss_pred HHHhhcCH
Confidence 99988653
No 68
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=98.30 E-value=4.7e-07 Score=72.91 Aligned_cols=77 Identities=8% Similarity=0.055 Sum_probs=51.0
Q ss_pred HHHHHHhcCCeeEEEeC-Ce---eEEEEeCHHHHHHHHhhCCcccCCCCc------hh-H--HHHhhcCCcceEeCCCCc
Q 038607 71 LGAMADKCGPIFTIKMG-IN---RALVVSNWEMAKECLTTHDKVFASRPK------TL-A--MEIFGYNFSMFGFSPYGS 137 (181)
Q Consensus 71 ~~~~~~~yG~v~~~~~~-~~---~~vvv~~p~~i~~vl~~~~~~f~~~~~------~~-~--~~~~~~~~~gl~~~~~g~ 137 (181)
+.+++++ |+++++.++ +. +.++++|++++++++.++ ..|+.++. .. . ..... .+.+++..+ |+
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~-g~ 94 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRE-LVGNLMDYD-PP 94 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------C-CTTCGGGCC-TT
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccc-cccCccccC-CH
Confidence 3446665 999999865 55 899999999999999433 34655543 11 1 11111 236777776 99
Q ss_pred hHHHHhhhhcccCC
Q 038607 138 YWRMAMGRGGEGTD 151 (181)
Q Consensus 138 ~Wk~~Rr~l~pa~~ 151 (181)
.|+++||+++++++
T Consensus 95 ~~~~~R~~~~~~fs 108 (398)
T 1lfk_A 95 EHTRLRRKLTPGFT 108 (398)
T ss_dssp HHHHHHHHHGGGGC
T ss_pred HHHHHHHHHHhhhC
Confidence 99999999999875
No 69
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=98.29 E-value=6.5e-07 Score=71.44 Aligned_cols=78 Identities=15% Similarity=0.117 Sum_probs=55.9
Q ss_pred HHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc-hh-HH-----H-HhhcC---CcceEeCCCC
Q 038607 68 HRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TL-AM-----E-IFGYN---FSMFGFSPYG 136 (181)
Q Consensus 68 ~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-~~-~~-----~-~~~~~---~~gl~~~~~g 136 (181)
+..+.++ ++||+++++. | .+++++++++++++.++ ..|++++. .. .. . .. .+ +++++.++ |
T Consensus 2 ~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~d-g 73 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVF-FDIPTRYTMLTSD-P 73 (367)
T ss_dssp HHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCC-CCCGGGSSGGGCC-T
T ss_pred CHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccch-hhcccccccccCC-c
Confidence 4456666 4799999887 3 88999999999999764 46766532 11 11 1 11 12 26788887 9
Q ss_pred chHHHHhhhhcccCCCC
Q 038607 137 SYWRMAMGRGGEGTDIP 153 (181)
Q Consensus 137 ~~Wk~~Rr~l~pa~~~~ 153 (181)
+.|+++||+++++++-.
T Consensus 74 ~~h~~~R~~~~~~fs~~ 90 (367)
T 3b4x_A 74 PLHDELRNLTADAFNPS 90 (367)
T ss_dssp THHHHHHHTTGGGGSGG
T ss_pred hhHHHHHHHHHHhcCHh
Confidence 99999999999998643
No 70
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=98.22 E-value=1.9e-07 Score=75.27 Aligned_cols=86 Identities=10% Similarity=0.071 Sum_probs=61.4
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccC-C-CCch--hHH---HHhhcCCcceEeCCCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFA-S-RPKT--LAM---EIFGYNFSMFGFSPYG 136 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~-~-~~~~--~~~---~~~~~~~~gl~~~~~g 136 (181)
.+++..+.++ ++||+++++.+ ++.+.++++|++++++++.++ .|. + ++.. ... ......+.+++++
T Consensus 16 ~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 89 (396)
T 1n40_A 16 DRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI--- 89 (396)
T ss_dssp SSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH---
T ss_pred cCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH---
Confidence 5788999999 99999999997 789999999999999999754 354 3 3221 100 0011012466554
Q ss_pred chHHHHhhhhcccCCCCCCCCce
Q 038607 137 SYWRMAMGRGGEGTDIPVPIPDI 159 (181)
Q Consensus 137 ~~Wk~~Rr~l~pa~~~~~~~~~~ 159 (181)
.|+++||+++++++-. +..+
T Consensus 90 -~h~~~R~~~~~~fs~~--~~~~ 109 (396)
T 1n40_A 90 -ADAGLRKAVMKAITPK--APGL 109 (396)
T ss_dssp -HHTTCHHHHHHHTSSC--STTH
T ss_pred -HHHHHHHHHHHhhChH--HHHh
Confidence 9999999999998744 4444
No 71
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=98.15 E-value=3.3e-06 Score=68.69 Aligned_cols=85 Identities=8% Similarity=0.015 Sum_probs=60.6
Q ss_pred CChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHhhCCcccCCCCc---hhHH------HHhhcCCcceEeCC
Q 038607 65 EPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLTTHDKVFASRPK---TLAM------EIFGYNFSMFGFSP 134 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~---~~~~------~~~~~~~~gl~~~~ 134 (181)
.+++..+.+++++ |+|+++.. ++.+.+++++++++++++.+. ..|+.++. .... ......+.+++..+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence 5688889888876 99999986 457899999999999998654 45554431 1000 11122335677776
Q ss_pred CCchHHHHhhhhcccCCC
Q 038607 135 YGSYWRMAMGRGGEGTDI 152 (181)
Q Consensus 135 ~g~~Wk~~Rr~l~pa~~~ 152 (181)
|+.|+++||+++++++-
T Consensus 116 -g~~h~~~R~~~~~~fs~ 132 (426)
T 3rwl_A 116 -RPRHDEQRKAVSPIVAP 132 (426)
T ss_dssp -TTHHHHHHHHHGGGGCH
T ss_pred -chHHHHHHHHhhhhhCH
Confidence 99999999999998753
No 72
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=98.08 E-value=8.6e-07 Score=70.00 Aligned_cols=65 Identities=15% Similarity=0.024 Sum_probs=48.5
Q ss_pred HhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc-hhHHHHhhcCCcceEeCCCCchHHHHhhhhcccCC
Q 038607 76 DKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLAMEIFGYNFSMFGFSPYGSYWRMAMGRGGEGTD 151 (181)
Q Consensus 76 ~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~ 151 (181)
++||+|+++ | .+++++++++++++.++ ..|++++. ... .. ++++++..+ |+.|+++||+++++++
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~~---~~~~l~~~~-g~~~~~~R~~~~~~fs 67 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-NA---GGISFITMD-NPEHKEFRDISAPYFL 67 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC-------CCGGGGCC-HHHHHHHHHHHHHHHS
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-Cc---cccccccCC-chHHHHHHHHhhhhcC
Confidence 579999875 3 89999999999999864 46766642 111 11 246887776 9999999999999875
No 73
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=97.89 E-value=2.2e-06 Score=69.43 Aligned_cols=81 Identities=11% Similarity=0.010 Sum_probs=54.9
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCc-hhHH------HHhhcCCcceEeCCCCc
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLAM------EIFGYNFSMFGFSPYGS 137 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~-~~~~------~~~~~~~~gl~~~~~g~ 137 (181)
.++... ++.++||+++.+..++.. +++++++++++++.++. +..... .... ......+++++..+ |+
T Consensus 33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 106 (416)
T 3p3o_A 33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-GA 106 (416)
T ss_dssp TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-HH
T ss_pred cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCC-ch
Confidence 456666 555679999998887666 89999999999997643 322211 1000 00111125677777 99
Q ss_pred hHHHHhhhhcccCC
Q 038607 138 YWRMAMGRGGEGTD 151 (181)
Q Consensus 138 ~Wk~~Rr~l~pa~~ 151 (181)
+|+++||+++++++
T Consensus 107 ~h~~~Rr~~~~~fs 120 (416)
T 3p3o_A 107 DHRRLRGLATHPFT 120 (416)
T ss_dssp HHHHHHHTTCGGGS
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999875
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=97.69 E-value=2.1e-05 Score=63.71 Aligned_cols=83 Identities=10% Similarity=-0.053 Sum_probs=54.9
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh---HHH-HhhcCCcceEeCCCCchHH
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL---AME-IFGYNFSMFGFSPYGSYWR 140 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~---~~~-~~~~~~~gl~~~~~g~~Wk 140 (181)
.+++..+.++++ +|+|++. .+...+++++++++++++.+ ...|+...... ... .....+.+++.++ |++|+
T Consensus 34 ~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d-~~~fs~~~~~~~~~~~~~~~~~~~~~~~~~D-g~~H~ 108 (412)
T 4dnj_A 34 ADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLND-PLTFCSSRGVGLSDFKKEKPWRPPSLILEAD-PPAHT 108 (412)
T ss_dssp HSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTC-TTTEESTTCSSSSCTTTSCCSSCCCTTTTCC-TTHHH
T ss_pred hCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcC-CccccCCCccccccccccccccCCCccccCC-hHHHH
Confidence 467788877765 7999754 55668899999999999964 34443322111 111 1111223455565 99999
Q ss_pred HHhhhhcccCCC
Q 038607 141 MAMGRGGEGTDI 152 (181)
Q Consensus 141 ~~Rr~l~pa~~~ 152 (181)
++||+++++++-
T Consensus 109 r~R~~~~~~Fs~ 120 (412)
T 4dnj_A 109 RTRAVLSKVLSP 120 (412)
T ss_dssp HHHHHHHHHTCH
T ss_pred HHHhhcccccCH
Confidence 999999999863
No 75
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=97.68 E-value=2e-05 Score=63.32 Aligned_cols=80 Identities=8% Similarity=-0.026 Sum_probs=53.8
Q ss_pred CChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCcceEeCCCCchHHHHhh
Q 038607 65 EPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFSMFGFSPYGSYWRMAMG 144 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~gl~~~~~g~~Wk~~Rr 144 (181)
.+++..+.++++ +|+|+++.. | .+++++++.+++++.+. .|+.++...........+++++..+ |+.|+++||
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~-g--~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLED-G--TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTT-S--CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecC-C--eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCC-chHHHHHHH
Confidence 367788887766 489987653 2 68899999999998542 4543321110011111235676676 999999999
Q ss_pred hhcccCC
Q 038607 145 RGGEGTD 151 (181)
Q Consensus 145 ~l~pa~~ 151 (181)
+++++++
T Consensus 93 ~~~~~fs 99 (394)
T 2wiy_A 93 QTNKWFT 99 (394)
T ss_dssp HHHTTCS
T ss_pred HHHhccC
Confidence 9999886
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=96.22 E-value=0.0024 Score=51.69 Aligned_cols=83 Identities=12% Similarity=-0.015 Sum_probs=51.7
Q ss_pred CChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchhHHHHhhcCCc-ceEeCCCCchHHHH
Q 038607 65 EPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIFGYNFS-MFGFSPYGSYWRMA 142 (181)
Q Consensus 65 ~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~~~~~~~~~~~-gl~~~~~g~~Wk~~ 142 (181)
.+++..+.++++..+ +++..-.++ ...+++..+.+++|+.+ .+.|+.+....... .+.... .++..+ +++|+++
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d-~~~fs~~~~~~~~~-~~~~~~~~~~~~D-~p~H~r~ 112 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSD-PTRFSSEVIFLPKE-AGEKAQMVPTKMD-PPEHTPY 112 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEESSCCSSSTT-SSCSSCTTTTTCC-TTTHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcC-chhccCCCcccccc-cccccccCcccCC-cHHHHHH
Confidence 467777777766543 455443333 46778999999999953 44565443221111 111112 333445 9999999
Q ss_pred hhhhcccCC
Q 038607 143 MGRGGEGTD 151 (181)
Q Consensus 143 Rr~l~pa~~ 151 (181)
||+++++|+
T Consensus 113 Rrll~~~Fs 121 (417)
T 4dxy_A 113 RKALDKGLN 121 (417)
T ss_dssp HHHHHHHHC
T ss_pred HHHhhhhcC
Confidence 999999875
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=93.28 E-value=0.01 Score=47.56 Aligned_cols=94 Identities=14% Similarity=0.201 Sum_probs=59.5
Q ss_pred CcceeeecccC---CCCCChHHHHHHHHHhcCCeeEEEeCCeeEEEEeCHHHHHHHHhhCCcccCCCCchh--HH-----
Q 038607 51 AWPVTGHLHLL---GGPEPPHRVLGAMADKCGPIFTIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL--AM----- 120 (181)
Q Consensus 51 ~~p~~G~l~~~---~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvv~~p~~i~~vl~~~~~~f~~~~~~~--~~----- 120 (181)
++|++|+...+ ....+++..+.+++++ +|++.. .+.+++++++++++++.+ ..|+.++... ..
T Consensus 42 ~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~~~~~~~~~~~~~ 114 (381)
T 2yjn_B 42 GYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRATGRTPEWMRAAGA 114 (381)
T ss_dssp HHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSCCCCCHHHHHHTC
T ss_pred cccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCccccccccccccc
Confidence 57899976432 1115789999988876 888654 458999999999999975 3565443210 10
Q ss_pred HHhhcCCcceEeCCCCchHHHHhhhhcccCCCCCCCCceeecc
Q 038607 121 EIFGYNFSMFGFSPYGSYWRMAMGRGGEGTDIPVPIPDILHIS 163 (181)
Q Consensus 121 ~~~~~~~~gl~~~~~g~~Wk~~Rr~l~pa~~~~~~~~~~~~~~ 163 (181)
..... +.+++..+ |++| +++++ . .+.++.+.
T Consensus 115 ~~~~~-~~~l~~~d-g~~H-------~~~Ft--~-~~~i~~~~ 145 (381)
T 2yjn_B 115 PPAEW-AQPFRDVH-AASW-------EGEVP--D-VGELAESF 145 (381)
T ss_dssp CHHHH-THHHHHHH-HCCC-------CSCCC--C-CSCHHHHT
T ss_pred ccchh-hhhhhhCC-chhh-------hhccC--C-hHHHHHHH
Confidence 01111 25677777 9999 45555 3 55555554
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.67 E-value=6.9 Score=24.76 Aligned_cols=63 Identities=16% Similarity=0.189 Sum_probs=43.7
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcC-CeeEEEeCCeeEEEEeCHHHHHHHHhh-CCcccCCCC
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCG-PIFTIKMGINRALVVSNWEMAKECLTT-HDKVFASRP 115 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvv~~p~~i~~vl~~-~~~~f~~~~ 115 (181)
.-+++||..=.........+.+.+.+|| +|..+ .+|.-+|...+.+.++..+.+ +...+-+|+
T Consensus 11 ~lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 11 LLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 4569998754321233556888999995 88888 478999999999999888754 333333343
No 79
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=67.46 E-value=17 Score=21.95 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=38.7
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC------CeeEEEEeCHHHHHHHHhh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~i~~vl~~ 106 (181)
+|...-++||+..-....+....+.+...+||++..+.+. +.-+|-..+.+.++..+..
T Consensus 6 ~~~~~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 6 RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp CCCSEEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3345667898864332122334455888999999888764 4456677788888887753
No 80
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=65.56 E-value=25 Score=23.01 Aligned_cols=59 Identities=17% Similarity=0.115 Sum_probs=38.9
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC------CeeEEEEeCHHHHHHHHhh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~i~~vl~~ 106 (181)
+|...-++||+..-....+....+.+.+.+||+|..+.+. |.-+|...+.+.+...+..
T Consensus 27 ~p~~~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 27 EPSQVVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp SCCSEEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 3445678899864321122334567889999999877763 3456677788888888754
No 81
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=56.67 E-value=27 Score=20.28 Aligned_cols=52 Identities=15% Similarity=0.043 Sum_probs=36.4
Q ss_pred ceeeecccCCCCCC----hHHHHHHHHHhcCCeeEEEeC-------CeeEEEEeCHHHHHHHHhh
Q 038607 53 PVTGHLHLLGGPEP----PHRVLGAMADKCGPIFTIKMG-------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 53 p~~G~l~~~~~~~~----~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~i~~vl~~ 106 (181)
-++||++.-. .+ ....+.+...+||++..+.+. |.-+|-..+++.++..+..
T Consensus 4 l~V~nLp~~~--~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 4 IVVDNVPQVG--PDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEEESCCCCC--TTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCCCc--HHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 3678876432 22 456788888999999888764 3345666788888888753
No 82
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=55.66 E-value=32 Score=20.80 Aligned_cols=55 Identities=9% Similarity=0.122 Sum_probs=36.2
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC------CeeEEEEeCHHHHHHHHh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG------INRALVVSNWEMAKECLT 105 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~i~~vl~ 105 (181)
.--++||+..-....+....+.+...+||.|..+.+. +.-+|-..+++.++..+.
T Consensus 10 ~~l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 10 ADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 4567898864332123333455888999999888864 234566678888887765
No 83
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=50.92 E-value=37 Score=20.27 Aligned_cols=51 Identities=10% Similarity=0.031 Sum_probs=35.4
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC----CeeEEEEeCHHHHHH
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG----INRALVVSNWEMAKE 102 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~i~~ 102 (181)
++...-++|++..- --...+.+...+||+|..+.+. |.-+|-..+++.++.
T Consensus 9 ~~~~~l~V~~Lp~~----~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~ 63 (89)
T 3d2w_A 9 HHGSKVFVGRCTED----MTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQS 63 (89)
T ss_dssp --CCEEEEESCCTT----CCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHH
T ss_pred CCCCEEEEeCCCCC----CCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHH
Confidence 33456778988643 2455688888999999888864 445666778888774
No 84
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=50.70 E-value=32 Score=19.40 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=32.7
Q ss_pred eeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhhC
Q 038607 54 VTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTTH 107 (181)
Q Consensus 54 ~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~~ 107 (181)
++||+..- -....+.+...+||++..+.+. +.-.|-..+++.++..+..+
T Consensus 3 ~v~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 3 FVGGLSPD----TPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp EESCCCSS----CCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 45665432 2445677888889998777753 22455567888888887643
No 85
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=50.34 E-value=43 Score=20.77 Aligned_cols=52 Identities=15% Similarity=0.071 Sum_probs=36.8
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC--------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG--------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++|+++.- -....+.+...+||+|..+.+. |.-+|...+.+.++..+..
T Consensus 12 ~~lfV~~Lp~~----~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 12 RSVYIKGFPTD----ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp GCEEEECCCTT----CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred CEEEEECCCCC----CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 35678887543 3445677888899998877753 3456667789999888853
No 86
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=49.86 E-value=43 Score=20.61 Aligned_cols=54 Identities=15% Similarity=0.032 Sum_probs=38.2
Q ss_pred CcceeeecccCCCCCC----hHHHHHHHHHhcCCeeEEEeC-------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEP----PHRVLGAMADKCGPIFTIKMG-------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~----~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..-. .+ ....+.+...+||.|..+.+. |.-+|-..+++.++..+..
T Consensus 16 ~~l~V~nLp~~~--~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 16 SVIVVDNVPQVG--PDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp SEEEEESCCCCC--TTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred CEEEEeCCCcch--hhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 356889987533 22 457788899999999888764 3455666788877777654
No 87
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=48.73 E-value=48 Score=20.84 Aligned_cols=52 Identities=12% Similarity=-0.010 Sum_probs=36.9
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC--CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG--INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--~~~~vvv~~p~~i~~vl~~ 106 (181)
.--++||+..-. ..+.+.+.+.+||+|..+.+. +.-+|...+.+.++..+..
T Consensus 17 ~~l~V~nLp~~~----t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 17 NRVVVSGLPPSG----SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp CCEEEEECCSSC----CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred cEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 346789986433 233566778899999888764 4566777888888888763
No 88
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=48.68 E-value=46 Score=20.67 Aligned_cols=57 Identities=19% Similarity=0.142 Sum_probs=39.5
Q ss_pred CCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC------CeeEEEEeCHHHHHHHHh
Q 038607 45 APEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG------INRALVVSNWEMAKECLT 105 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~i~~vl~ 105 (181)
.|+.+...-++||+..- -....+.+...+||.+..+.+. +.-+|-..+.+.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~~----~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK----ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT----CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 34445566788998643 2445678888899999887762 245666778888887775
No 89
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=40.47 E-value=64 Score=19.95 Aligned_cols=57 Identities=16% Similarity=-0.054 Sum_probs=39.2
Q ss_pred CCCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---CeeEEEEeCHHHHHHHHh
Q 038607 45 APEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---INRALVVSNWEMAKECLT 105 (181)
Q Consensus 45 ~P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~vvv~~p~~i~~vl~ 105 (181)
...+|...-++||+..- --...+.+...+||.|..+.+. +.-+|-..+.+.++..+.
T Consensus 10 ~~~~p~~~l~V~nLp~~----~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 10 MDGAPSRVLHIRKLPGE----VTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp CCSSCCSEEEEESCCTT----CCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 34445567789998642 2345677888899998877753 345666778888877764
No 90
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=40.15 E-value=95 Score=21.82 Aligned_cols=53 Identities=8% Similarity=-0.106 Sum_probs=38.3
Q ss_pred CCCcceeeecc-cCCCCCChHHHHHHHHHhcCCeeEEEeC----CeeEEEEeCHHHHHHHHh
Q 038607 49 GGAWPVTGHLH-LLGGPEPPHRVLGAMADKCGPIFTIKMG----INRALVVSNWEMAKECLT 105 (181)
Q Consensus 49 p~~~p~~G~l~-~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~i~~vl~ 105 (181)
+...-++||+. .- --.+.+.+...+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 3 ~~~~l~V~nL~~~~----~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 3 DSPVLMVYGLDQSK----MNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp CCSEEEEECCCTTT----CCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCccc----CCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 44567889986 32 2334678888999999988864 456777889988887764
No 91
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.60 E-value=78 Score=20.40 Aligned_cols=56 Identities=9% Similarity=-0.037 Sum_probs=37.7
Q ss_pred CCCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---CeeEEEEeCHHHHHHHHh
Q 038607 46 PEAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---INRALVVSNWEMAKECLT 105 (181)
Q Consensus 46 P~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~vvv~~p~~i~~vl~ 105 (181)
..+|...-++|||..- --...+.+.+.+||.|..+.+. +.-+|-..+.+.+...+.
T Consensus 27 ~~~ps~~LfVgNLp~~----vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 27 AGVPSRVIHIRKLPID----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp CSSCCSEEEEESCCTT----CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 3344456789998643 2345677888999998877754 345555667777777764
No 92
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.70 E-value=73 Score=19.54 Aligned_cols=52 Identities=10% Similarity=-0.063 Sum_probs=37.9
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC--CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG--INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--~~~~vvv~~p~~i~~vl~~ 106 (181)
.--++||+..- -..+.+.+.+.+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 16 ~~l~V~nLp~~----~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 16 NRVVVSGLPPS----GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp CEEEEESCCSS----CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 34678888632 3456778888999998877753 5667777888888888764
No 93
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.62 E-value=65 Score=18.58 Aligned_cols=52 Identities=13% Similarity=0.029 Sum_probs=34.6
Q ss_pred CCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHh
Q 038607 50 GAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLT 105 (181)
Q Consensus 50 ~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~ 105 (181)
...-++||+..- -....+.+...+||++..+.+.. .-+|-..+++.++..+.
T Consensus 5 ~~~l~v~nlp~~----~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 5 SSGLYIRGLQPG----TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CCEEEEESCCTT----CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 345678887543 23455777778899988776422 24566678888877764
No 94
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=34.79 E-value=83 Score=19.61 Aligned_cols=52 Identities=15% Similarity=0.064 Sum_probs=36.3
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-----C----eeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-----I----NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~vvv~~p~~i~~vl~~ 106 (181)
.--++||+..- -..+.+.+...+||.|..+.+. + .-+|...+.+.++..+..
T Consensus 7 ~~lfV~nL~~~----~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 7 KEVTFARLNDN----VRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp CEEEEESCCTT----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred cEEEEECCCCC----CCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 45678888642 3456678888999998877752 1 246667788888888753
No 95
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=34.18 E-value=63 Score=18.06 Aligned_cols=48 Identities=6% Similarity=0.041 Sum_probs=31.4
Q ss_pred eeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHh
Q 038607 54 VTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLT 105 (181)
Q Consensus 54 ~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~ 105 (181)
++||++.- -....+.+...+||++..+.+.. .-.|-..+++.++.++.
T Consensus 3 ~v~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 3 FVGGLSVN----TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp EEECCCSS----CCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred EEecCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 46666432 34456778888999987777532 23455568888888764
No 96
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=34.14 E-value=85 Score=19.50 Aligned_cols=55 Identities=9% Similarity=-0.084 Sum_probs=38.4
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---eeEEEEeCHHHHHHHHh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---NRALVVSNWEMAKECLT 105 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---~~~vvv~~p~~i~~vl~ 105 (181)
.|...-++|||..- .---..+.+.+.+||.|..+.+.. .-+|-..+.+.+...+.
T Consensus 13 ~p~~~l~V~nLp~~---~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 13 ETRRVVHIMDFQRG---KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCEEEEESCCCS---SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC---cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 34456788998641 124456778889999998888653 45666778888887765
No 97
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.71 E-value=89 Score=19.64 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=37.3
Q ss_pred CCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---CeeEEEEeCHHHHHHHHh
Q 038607 50 GAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---INRALVVSNWEMAKECLT 105 (181)
Q Consensus 50 ~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~vvv~~p~~i~~vl~ 105 (181)
...-++||+..- -.-..+.+.+.+||.|..+.+. +.-+|-..+.+.++..+.
T Consensus 16 ~~~LfV~nLp~~----vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 16 SRVIHIRKLPID----VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCEEEECSCCTT----SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 356788998642 2344577888999999888753 346677778888887775
No 98
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=32.86 E-value=82 Score=18.95 Aligned_cols=55 Identities=15% Similarity=0.076 Sum_probs=38.4
Q ss_pred CCCCcceeeeccc-CCCCCChHHHHHHHHHhcCCeeEEEeC-CeeEEEEeCHHHHHHHHhh
Q 038607 48 AGGAWPVTGHLHL-LGGPEPPHRVLGAMADKCGPIFTIKMG-INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 48 ~p~~~p~~G~l~~-~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvv~~p~~i~~vl~~ 106 (181)
++...-++||+.. -. ....+.+...+||.+..+.+. +.-+|-..+.+.++..+..
T Consensus 20 ~~~~~l~V~nLp~~~~----t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 20 HMKSRLFIGNLPLKNV----SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp CTTCEEEEESCCSSCC----CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcccC----CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 3345567898864 22 345677888899999888763 4566667788888888753
No 99
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=31.63 E-value=95 Score=19.32 Aligned_cols=51 Identities=14% Similarity=0.044 Sum_probs=35.5
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC-------eeEEEEeCHHHHHHHHhh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI-------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~-------~~~vvv~~p~~i~~vl~~ 106 (181)
--++||+..- --.+.+.+...+||.|..+.+.. .-+|-..+++.++..+..
T Consensus 7 ~lfV~nLp~~----~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 7 NIFIKNLDKS----IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEECCCCCC----CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 4678888643 23457788889999987766531 245667788988888754
No 100
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=30.48 E-value=92 Score=18.79 Aligned_cols=52 Identities=10% Similarity=-0.003 Sum_probs=37.1
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||.|..+.+. +.-+|-..+++.++..+..
T Consensus 12 ~~l~V~nl~~~----~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 12 KVLFVRNLANT----VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CCEEEECCCTT----CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 45678888643 2345677888899999888864 3556667788888888753
No 101
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=29.98 E-value=1e+02 Score=19.23 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=32.9
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHH
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECL 104 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl 104 (181)
-++||+..- -....+.+...+||+|..+.+. +.-+|-..+.+.++..+
T Consensus 39 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 39 VYVGNVDYG----STAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp EEEEEECTT----CCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 467887533 2355678888899998776652 12455667888888887
No 102
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=29.49 E-value=1.1e+02 Score=19.28 Aligned_cols=52 Identities=15% Similarity=-0.038 Sum_probs=37.2
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcC-CeeEEEeC-----CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCG-PIFTIKMG-----INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~-----~~~~vvv~~p~~i~~vl~~ 106 (181)
.--++||+..- -..+.+.+...+|| .|..+.+. |.-+|-..+.+.++..+.+
T Consensus 29 ~~l~VgnLp~~----~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 29 YRITMKNLPEG----CSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEEECSSCC----CCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCC----CCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 45678988642 34567888889999 78777663 4466777788888888753
No 103
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=29.26 E-value=97 Score=18.68 Aligned_cols=55 Identities=11% Similarity=0.127 Sum_probs=36.2
Q ss_pred CcceeeecccCCCC--CChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHh
Q 038607 51 AWPVTGHLHLLGGP--EPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLT 105 (181)
Q Consensus 51 ~~p~~G~l~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~ 105 (181)
..-++||++..... ......+.+...+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 7 ~~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 7 QYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp GEEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred cEEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 34578888754310 12334577788899999888764 234566778888888775
No 104
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=29.06 E-value=1.5e+02 Score=20.67 Aligned_cols=56 Identities=21% Similarity=0.113 Sum_probs=36.8
Q ss_pred CCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 47 EAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 47 ~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
..|...-++|||..- --.+.+.+...+||+|..+.+. +.-+|-..+.+.+...+..
T Consensus 12 ~~p~~tlfVgnLp~~----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 12 SYPMASLYVGDLHPD----VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp ---CCEEEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC----CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 334455688998643 2355678888999998877652 1245667788888887754
No 105
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=27.36 E-value=1.2e+02 Score=19.29 Aligned_cols=66 Identities=12% Similarity=0.033 Sum_probs=36.8
Q ss_pred CCCCCcceeeecccCCCC------CChHHHHHHHHHhcCCeeEEEeC-----CeeEEEEeCHHHHHHHHhh-CCcccC
Q 038607 47 EAGGAWPVTGHLHLLGGP------EPPHRVLGAMADKCGPIFTIKMG-----INRALVVSNWEMAKECLTT-HDKVFA 112 (181)
Q Consensus 47 ~~p~~~p~~G~l~~~~~~------~~~~~~~~~~~~~yG~v~~~~~~-----~~~~vvv~~p~~i~~vl~~-~~~~f~ 112 (181)
+-|...-.+.|+.....- .+....+.+...+||.|..+.+. |.-+|-..+++.++..+.. +...|.
T Consensus 4 p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~ 81 (114)
T 3s6e_A 4 PLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 81 (114)
T ss_dssp CCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEET
T ss_pred CCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 334445566666544310 12233455666789998887763 3445556678777766643 333443
No 106
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.19 E-value=1.1e+02 Score=18.88 Aligned_cols=51 Identities=12% Similarity=-0.005 Sum_probs=33.8
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-------CeeEEEEeCHHHHHHHHh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-------INRALVVSNWEMAKECLT 105 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~i~~vl~ 105 (181)
..-++||+..- -..+.+.+...+||.|..+.+. +.-+|-..+.+.++..+.
T Consensus 30 ~~l~V~nLp~~----~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 30 KRLHVSNIPFR----FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp CEEEEESCCTT----CCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred CEEEEECCCCc----CCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 44578887532 3445678888899988776653 234555667777777765
No 107
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.97 E-value=1e+02 Score=18.08 Aligned_cols=55 Identities=22% Similarity=0.120 Sum_probs=36.5
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-----C----eeEEEEeCHHHHHHHHhh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-----I----NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~vvv~~p~~i~~vl~~ 106 (181)
++...-++||+..-. ..+.+.+...+||++..+.+. + .-+|-..+++.++..+..
T Consensus 13 ~~~~~l~v~nlp~~~----t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 13 DPNCCLGVFGLSLYT----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CGGGCEEEESCCSSC----CHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCC----CHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 334566788886432 345678888999998777652 1 234556788888887753
No 108
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=26.97 E-value=95 Score=17.81 Aligned_cols=52 Identities=13% Similarity=-0.011 Sum_probs=34.7
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||.+..+.+.. .-+|-..+.+.++..+..
T Consensus 7 ~~l~v~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 7 FHVFVGDLSPE----ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred eEEEEeCCCCC----CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 45577887542 24456788888999987766521 235556788888888753
No 109
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.72 E-value=1.2e+02 Score=18.74 Aligned_cols=51 Identities=10% Similarity=0.039 Sum_probs=34.1
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~ 106 (181)
.-++||+..- -....+.+++.+||.|..+.+.. .-+|-..+.+.++..+..
T Consensus 29 ~l~V~nLp~~----~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 29 KLFIGGLSFE----TTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEEEECCTTC----CCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 3578887543 23456778889999887766522 344556688888888754
No 110
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=25.85 E-value=1.2e+02 Score=18.63 Aligned_cols=55 Identities=20% Similarity=0.021 Sum_probs=35.6
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~ 106 (181)
++...-++||+..-. ..+.+.++..+||.|..+.+.. .-+|-..+.+.++..+..
T Consensus 23 ~~~~~l~V~nLp~~~----t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 23 PEGANLFIYHLPQEF----GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp STTCCEEEESCCSSC----CHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 333556789886432 3466788888999887666421 234555688888877743
No 111
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=25.67 E-value=1e+02 Score=17.74 Aligned_cols=52 Identities=12% Similarity=0.065 Sum_probs=35.1
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-----C----eeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-----I----NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||.+..+.+. + .-+|-..+++.++..+..
T Consensus 12 ~~l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 12 GKMFVGGLSWD----TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp TEEEEECCCTT----CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 45678888643 3455677888999998777652 1 244556688888888754
No 112
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.61 E-value=1.1e+02 Score=17.97 Aligned_cols=52 Identities=21% Similarity=0.201 Sum_probs=36.0
Q ss_pred CCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHh
Q 038607 50 GAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLT 105 (181)
Q Consensus 50 ~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~ 105 (181)
...-++||+..- -....+.+...+||++..+.+.. .-+|-..+.+.++..+.
T Consensus 5 ~~~l~v~nlp~~----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (95)
T 2dnz_A 5 SSGLYVGSLHFN----ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 65 (95)
T ss_dssp CCEEEEESCCTT----CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHH
T ss_pred CcEEEEeCCCCC----CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHH
Confidence 345678887543 24456788889999988777532 34566678888888876
No 113
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=25.53 E-value=1.2e+02 Score=18.38 Aligned_cols=51 Identities=12% Similarity=-0.033 Sum_probs=34.5
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-----C----eeEEEEeCHHHHHHHHhh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-----I----NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~vvv~~p~~i~~vl~~ 106 (181)
--++||++.-. -.+.+.+...+||+|..+.+. + .-+|-..+++.++..+..
T Consensus 21 ~lfV~nLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 21 NLIVNYLPQNM----TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEEESCCTTC----CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCC----CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 46788886432 345677888899998877652 1 134556788888877753
No 114
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=25.47 E-value=1.8e+02 Score=20.47 Aligned_cols=53 Identities=13% Similarity=0.108 Sum_probs=38.0
Q ss_pred CCCcceeeeccc-CCCCCChHHHHHHHHHhcCCeeEEEeC----CeeEEEEeCHHHHHHHHh
Q 038607 49 GGAWPVTGHLHL-LGGPEPPHRVLGAMADKCGPIFTIKMG----INRALVVSNWEMAKECLT 105 (181)
Q Consensus 49 p~~~p~~G~l~~-~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~i~~vl~ 105 (181)
+...-++||+.. -. ....+.+...+||.|..+.+. +.-+|-..+++.++..+.
T Consensus 33 ~~~~l~V~nLp~~~~----te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~ 90 (229)
T 2adc_A 33 GNSVLLVSNLNPERV----TPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS 90 (229)
T ss_dssp CCSEEEEESCCTTTC----CHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCcccC----CHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 334567888864 22 235677888899999888864 346677789999888875
No 115
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.27 E-value=1.1e+02 Score=17.86 Aligned_cols=52 Identities=8% Similarity=0.119 Sum_probs=37.1
Q ss_pred CCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEe-CCeeEEEEeCHHHHHHHHh
Q 038607 50 GAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKM-GINRALVVSNWEMAKECLT 105 (181)
Q Consensus 50 ~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvv~~p~~i~~vl~ 105 (181)
...-++||+..- -....+.+...+||+|..+.+ -+.-+|-..+++.++..+.
T Consensus 8 ~~~l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 8 MVKLFIGNLPRE----ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp CEEEEEESCCSS----CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred CeEEEEeCCCCC----CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 345678888643 234567888899999887775 3456667788888888774
No 116
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=25.16 E-value=1.1e+02 Score=18.16 Aligned_cols=48 Identities=15% Similarity=0.066 Sum_probs=32.6
Q ss_pred eeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC----CeeEEEEeCHHHHHHHHh
Q 038607 54 VTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG----INRALVVSNWEMAKECLT 105 (181)
Q Consensus 54 ~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~i~~vl~ 105 (181)
++||+..- -....+.+...+||++..+.+. +.-+|-..+++.++..+.
T Consensus 4 ~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 55 (101)
T 2hvz_A 4 YVGNLGTG----AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 55 (101)
T ss_dssp EEECCCSS----CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHH
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHH
Confidence 56776532 2445678888899998777652 345566678888887775
No 117
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.14 E-value=1.2e+02 Score=18.53 Aligned_cols=48 Identities=8% Similarity=-0.040 Sum_probs=32.4
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHH
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECL 104 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl 104 (181)
-++||+..- -....+.+.+.+||.|..+.+. +.-+|-..+.+.++..+
T Consensus 28 l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 28 VFCMQLAAR----IRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp EEEESCCTT----CCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred EEEeCCCCC----CCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 467887533 2345678888999999888764 12455566777777776
No 118
>2lyd_B Pacman protein; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=25.14 E-value=7.1 Score=19.48 Aligned_cols=9 Identities=44% Similarity=0.722 Sum_probs=6.2
Q ss_pred CCCCCCccC
Q 038607 164 PSPPRPHQN 172 (181)
Q Consensus 164 ~~~~~~~~~ 172 (181)
|-||.|||+
T Consensus 22 p~pplfwq~ 30 (38)
T 2lyd_B 22 PKPPLFWQQ 30 (38)
T ss_dssp CCCCHHHHH
T ss_pred CCCchHHHH
Confidence 567777774
No 119
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=24.97 E-value=1.6e+02 Score=20.37 Aligned_cols=50 Identities=16% Similarity=0.144 Sum_probs=34.8
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC--------CeeEEEEeCHHHHHHHHhh
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG--------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvv~~p~~i~~vl~~ 106 (181)
-++||++. ......+.+...+||+|..+.+. |.-+|-..+.+.++..+..
T Consensus 112 l~V~nLp~----~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 112 VYIKGFPT----DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp EEEECCCT----TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred EEecCCCC----cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 46788753 23556788889999998776643 2345556788888888754
No 120
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=24.85 E-value=1.3e+02 Score=18.76 Aligned_cols=52 Identities=10% Similarity=0.033 Sum_probs=36.8
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.++..+||.|..+.+. +.-+|-..+++.++..+..
T Consensus 23 ~~l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 83 (126)
T 3ex7_B 23 WILFVTGVHEE----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 83 (126)
T ss_dssp EEEEEESCCTT----CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35678887643 2455677888899999888763 2346667788988888753
No 121
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=24.84 E-value=1.4e+02 Score=19.08 Aligned_cols=54 Identities=22% Similarity=0.111 Sum_probs=36.8
Q ss_pred CCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 49 GGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 49 p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
+...-++||+..-. ..+.+.+...+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 45 ~~~~l~V~nLp~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 45 PNCCLGVFGLSLYT----TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CSSCBCEETCTTSC----CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 33456788875432 345678888999998877753 2345666788888888763
No 122
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=24.70 E-value=1.2e+02 Score=18.36 Aligned_cols=50 Identities=10% Similarity=-0.024 Sum_probs=35.5
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLT 105 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~ 105 (181)
.-++||+..- -....+.+...+||.+..+.+. +.-+|-..+.+.++..+.
T Consensus 28 ~l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 28 ILFVTSIHEE----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEEESCCTT----CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 4678887643 2345678888999999888763 234666778888888775
No 123
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.47 E-value=1.2e+02 Score=18.14 Aligned_cols=54 Identities=17% Similarity=-0.079 Sum_probs=36.6
Q ss_pred CCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-------CeeEEEEeCHHHHHHHHhh
Q 038607 49 GGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 49 p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~i~~vl~~ 106 (181)
+...-++||+..-. ....+.+...+||.|..+.+. +.-+|-..+.+.++..+..
T Consensus 14 ~~~~l~V~nlp~~~----t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDGI----DDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTTC----CHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCC----CHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 34567789886432 345677788899998777653 2345566788888888753
No 124
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=24.32 E-value=1.3e+02 Score=18.46 Aligned_cols=52 Identities=10% Similarity=-0.027 Sum_probs=36.3
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||.+..+.+.. .-+|-..+.+.++..+..
T Consensus 26 ~~lfV~nLp~~----~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~ 86 (109)
T 2rs2_A 26 CKMFIGGLSWQ----TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 86 (109)
T ss_dssp CCEEEESCCTT----CCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHS
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 45578887532 23456778888999998877632 346667788888888754
No 125
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.31 E-value=1.2e+02 Score=18.13 Aligned_cols=55 Identities=15% Similarity=-0.135 Sum_probs=36.6
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHh-cCCeeEEEeC--------CeeEEEEeCHHHHHHHHhh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADK-CGPIFTIKMG--------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~-yG~v~~~~~~--------~~~~vvv~~p~~i~~vl~~ 106 (181)
.+...-++||+..-. ....+.+...+ ||.|..+.+. +.-+|-..+.+.++..+..
T Consensus 7 ~~~~~l~V~nLp~~~----t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 7 GPEYSLFVGDLTPDV----DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SCCCCEEEECCCTTC----CHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCCC----CHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 334566789886432 34567778888 9998777652 2245556788888888763
No 126
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.28 E-value=81 Score=19.47 Aligned_cols=52 Identities=12% Similarity=-0.029 Sum_probs=33.7
Q ss_pred CcceeeecccCCCCCChHHHHH---HHHHhcCCeeEEEeC------------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLG---AMADKCGPIFTIKMG------------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~---~~~~~yG~v~~~~~~------------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..-. ..+.+. +...+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 16 ~~l~V~nLp~~~----~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 16 NLVFVVGLSQRL----ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp SCEEEEEECTTT----CCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCCC----CHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 456789986433 122344 777889998777653 1344556688888887764
No 127
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.22 E-value=1.2e+02 Score=18.03 Aligned_cols=53 Identities=9% Similarity=0.000 Sum_probs=36.1
Q ss_pred CCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC--------CeeEEEEeCHHHHHHHHhh
Q 038607 50 GAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG--------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 50 ~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvv~~p~~i~~vl~~ 106 (181)
...-++||+..- -....+.+...+||++..+.+. +.-+|-..+++.++..+..
T Consensus 17 ~~~l~v~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 17 KHKLFISGLPFS----CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CSCEEEESCCTT----CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCEEEEeCCCCC----CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 345678887643 2345678888899998777653 2345666788888888753
No 128
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=24.05 E-value=2.3e+02 Score=22.69 Aligned_cols=52 Identities=12% Similarity=-0.021 Sum_probs=36.0
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++|||..-. ....+.+++.+||.|..+.+. +.-+|...+++.+..++..
T Consensus 103 ~~lfV~nL~~~~----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 103 KTLFVARVNYDT----TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 456889885432 345677888899998877753 2356667788888887754
No 129
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=23.80 E-value=1.4e+02 Score=18.61 Aligned_cols=52 Identities=21% Similarity=0.124 Sum_probs=35.4
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC--------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG--------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||.|..+.+. +.-+|-..+.+.++..+..
T Consensus 8 ~~l~V~nLp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 8 GKLFIGGLNRE----TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp CEEEEECCTTT----CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 45568887542 2445678888999998776653 2345566788888888754
No 130
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=23.68 E-value=1.2e+02 Score=17.67 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=35.0
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||++..+.+. +.-+|-..+.+.++..+..
T Consensus 9 ~~l~V~nlp~~----~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 9 CQIFVRNLPFD----FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp CEEEECSCCTT----CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred cEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 45678887632 3456678888899998776643 2245556688888887753
No 131
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=23.33 E-value=1.4e+02 Score=18.41 Aligned_cols=52 Identities=15% Similarity=0.007 Sum_probs=35.4
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -..+.+.+...+||.|..+.+.. .-+|-..+.+.++..+..
T Consensus 41 ~~l~V~nlp~~----~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 41 CNLFIYHLPQE----FTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp EEEEEECSCTT----CCHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 34567877543 23456788888999988877632 245666788888888754
No 132
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=23.09 E-value=1.6e+02 Score=19.22 Aligned_cols=57 Identities=16% Similarity=0.058 Sum_probs=35.1
Q ss_pred CCCCCCCcc--eeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC-----eeEEEEeCHHHHHHHHh
Q 038607 45 APEAGGAWP--VTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI-----NRALVVSNWEMAKECLT 105 (181)
Q Consensus 45 ~P~~p~~~p--~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~-----~~~vvv~~p~~i~~vl~ 105 (181)
.+++|.... ++||+..- --.+.+.+.+.+||.|-.+.+.. +-+|...+++.++..+.
T Consensus 21 ~~~~ps~VL~I~V~NL~~~----vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 21 AMAGQSPVLRIIVENLFYP----VTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp ----CCSEEEEEEESCCSC----CCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred ccCCCCceEEEEECCCCCC----CCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 334444433 48888532 24456888899999988777643 25666778877777664
No 133
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.05 E-value=1.2e+02 Score=17.69 Aligned_cols=52 Identities=15% Similarity=0.128 Sum_probs=36.6
Q ss_pred CCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC-eeEEEEeCHHHHHHHHh
Q 038607 50 GAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI-NRALVVSNWEMAKECLT 105 (181)
Q Consensus 50 ~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~-~~~vvv~~p~~i~~vl~ 105 (181)
...-++||+..- -....+.+...+||+|..+.+.. .-+|-..+++.++..+.
T Consensus 10 ~~~l~V~nLp~~----~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~ 62 (92)
T 2dgt_A 10 STKLHVGNISPT----CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIR 62 (92)
T ss_dssp SEEEEEESCCSS----CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCCC----CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHH
Confidence 345678888543 34556788889999988887643 45556678888887775
No 134
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.98 E-value=1.4e+02 Score=18.39 Aligned_cols=59 Identities=8% Similarity=0.001 Sum_probs=39.1
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---CeeEEEEeCHHHHHHHHhh-CCcccCCC
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---INRALVVSNWEMAKECLTT-HDKVFASR 114 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~vvv~~p~~i~~vl~~-~~~~f~~~ 114 (181)
.-++||+.. .-....+.+.+.+||+|..+.+. +.-+|-..+.+.++..+.. +...+..+
T Consensus 12 ~l~V~nLp~----~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~ 74 (111)
T 1whx_A 12 VILAKNLPA----GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHV 74 (111)
T ss_dssp EEEEESCCT----TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSS
T ss_pred EEEEeCCCC----CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCe
Confidence 456788753 23456688888999999888863 2456666788888877653 33344333
No 135
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=22.89 E-value=1.7e+02 Score=19.40 Aligned_cols=51 Identities=10% Similarity=-0.020 Sum_probs=35.0
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
.-++||+..- -....+.+.+.+||.|..+.+. +.-+|-..+.+.++..+..
T Consensus 74 ~l~V~nLp~~----~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 74 ILFVTSIHEE----AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEEESCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 3678887642 3456688888999998777653 2345556788888877753
No 136
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=22.65 E-value=1.3e+02 Score=18.00 Aligned_cols=51 Identities=10% Similarity=0.057 Sum_probs=34.7
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
.-++||+..- -....+.+...+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 25 ~l~V~nlp~~----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 25 ILFVTGVHEE----ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEEECCCTT----CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3578887643 2345678888999998877752 2245556788888887753
No 137
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=22.36 E-value=1.3e+02 Score=17.78 Aligned_cols=52 Identities=12% Similarity=0.027 Sum_probs=36.2
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.++..+||+|..+.+. +.-+|-..+.+.++..+..
T Consensus 9 ~~l~V~nlp~~----~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 9 GRLFVRNLSYT----SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEEEECCCTT----CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC----CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 45678887643 2345678888899999888763 2345667788888888743
No 138
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=22.31 E-value=1e+02 Score=19.42 Aligned_cols=40 Identities=13% Similarity=-0.052 Sum_probs=30.9
Q ss_pred ChHHHHHHHHHhcCCeeEEEeCC-eeEEEEeCHHHHHHHHh
Q 038607 66 PPHRVLGAMADKCGPIFTIKMGI-NRALVVSNWEMAKECLT 105 (181)
Q Consensus 66 ~~~~~~~~~~~~yG~v~~~~~~~-~~~vvv~~p~~i~~vl~ 105 (181)
--...+.+++..||.+.--|+-. .-.+++.+++.+++++.
T Consensus 27 wKt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 27 WKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp CCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hhhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 34556888889999776666654 56777889999999987
No 139
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.08 E-value=1.1e+02 Score=18.35 Aligned_cols=52 Identities=15% Similarity=0.001 Sum_probs=35.0
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..-. ....+.+...+||+|..+.+.. .-+|-..+.+.++..+..
T Consensus 16 ~~l~V~nlp~~~----t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 16 ATIRVTNLSEDT----RETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEEEEESCCTTC----CHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCCC----CHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 456788886432 3455777788899987776532 235556788888888753
No 140
>1av3_A Kappa-PVIIA; kappa-conotoxin, potassium channel blocker, cystine knot; HET: HYP; NMR {Conus purpurascens} SCOP: g.3.6.1 PDB: 1kcp_A*
Probab=21.68 E-value=32 Score=15.57 Aligned_cols=8 Identities=38% Similarity=1.036 Sum_probs=5.8
Q ss_pred CCccCccc
Q 038607 168 RPHQNCLR 175 (181)
Q Consensus 168 ~~~~~~~~ 175 (181)
+|.|+|..
T Consensus 3 ipnqkcfq 10 (27)
T 1av3_A 3 IPNQKCFQ 10 (27)
T ss_dssp CTTSBCCG
T ss_pred CCcHHHHH
Confidence 57788864
No 141
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.37 E-value=1.3e+02 Score=17.49 Aligned_cols=54 Identities=11% Similarity=0.123 Sum_probs=37.5
Q ss_pred CCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHh
Q 038607 48 AGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLT 105 (181)
Q Consensus 48 ~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~ 105 (181)
++...-++||+..- -..+.+.+...+||++..+.+.. .-+|-..+++.++..+.
T Consensus 14 ~~~~~l~V~nlp~~----~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 14 PSKSTVYVSNLPFS----LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp CCTTSEEEESCCTT----SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCC----CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 33456678888632 34456788888999998877632 34666778888888875
No 142
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=21.35 E-value=1.6e+02 Score=18.30 Aligned_cols=55 Identities=11% Similarity=-0.087 Sum_probs=38.9
Q ss_pred CCCCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---CeeEEEEeCHHHHHHHHh
Q 038607 47 EAGGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---INRALVVSNWEMAKECLT 105 (181)
Q Consensus 47 ~~p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~vvv~~p~~i~~vl~ 105 (181)
.+|...-++||+..- -.-..+.+...+||.|..+.+. +.-+|-..+.+.++..+.
T Consensus 18 ~~ps~~l~V~NLp~~----~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~ 75 (100)
T 3r27_A 18 TPASPVVHIRGLIDG----VVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVN 75 (100)
T ss_dssp CCCCSEEEEESCCTT----CCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCC----CCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 344567889998642 2345678888999999877753 456666778888887764
No 143
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.95 E-value=1.1e+02 Score=17.62 Aligned_cols=48 Identities=8% Similarity=0.036 Sum_probs=31.7
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC----CeeEEEEeCHHHHHH
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG----INRALVVSNWEMAKE 102 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~vvv~~p~~i~~ 102 (181)
..-++||+..- -..+.+.+...+||+|..+.+. +.-+|-..+.+.++.
T Consensus 6 ~~l~V~nLp~~----~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~ 57 (88)
T 1wf0_A 6 SGVFVGRCTGD----MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQS 57 (88)
T ss_dssp CEEEEESCCSS----SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHH
T ss_pred cEEEEeCCCCC----CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHH
Confidence 34567887543 2345677888899998888764 234555667777654
No 144
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.95 E-value=1.2e+02 Score=16.82 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=30.1
Q ss_pred eeeecccCCCCCChHHHHHHHHHhcCCeeEEEeCC---------eeEEEEeCHHHHHHHHhhCC
Q 038607 54 VTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMGI---------NRALVVSNWEMAKECLTTHD 108 (181)
Q Consensus 54 ~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvv~~p~~i~~vl~~~~ 108 (181)
++||++.-. ....+.+...+||++..+.+.. .-.|-..+++.++..+....
T Consensus 4 ~v~nlp~~~----t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 63 (77)
T 1uaw_A 4 FIGGLSWQT----TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 63 (77)
T ss_dssp EEESCCSSC----CSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTT
T ss_pred EEeCCCCCC----CHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCC
Confidence 567765332 2345677788899876655421 23344457777777775433
No 145
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.64 E-value=1.5e+02 Score=17.72 Aligned_cols=51 Identities=10% Similarity=-0.015 Sum_probs=35.5
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLT 105 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~ 105 (181)
..-++||+..- -....+.++..+||.|..+.+. +.-+|-..+++.++..+.
T Consensus 14 ~~l~V~nLp~~----~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 73 (103)
T 2dnm_A 14 ITLKVDNLTYR----TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEA 73 (103)
T ss_dssp CEEEEESCCTT----CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHH
T ss_pred eEEEEeCCCCC----CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHH
Confidence 45678888643 2445678888899999888764 234566678888877775
No 146
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=20.60 E-value=2.1e+02 Score=19.57 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=34.4
Q ss_pred ceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC-----CeeEEEEeCHHHHHHHHhh
Q 038607 53 PVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG-----INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 53 p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~~~~vvv~~p~~i~~vl~~ 106 (181)
-++||+.. .--.+.+.+.+.+||.|-.+.+. +.-+|-..|.+.+++.+..
T Consensus 49 l~VgNL~~----~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 49 IIVENLFY----PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EEECSCCS----CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCcCC----CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 35788753 23445678889999998877763 2356667788888877754
No 147
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.59 E-value=1.5e+02 Score=17.69 Aligned_cols=52 Identities=12% Similarity=0.133 Sum_probs=33.7
Q ss_pred CcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC---------CeeEEEEeCHHHHHHHHhh
Q 038607 51 AWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG---------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 51 ~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvv~~p~~i~~vl~~ 106 (181)
..-++||+..- -....+.+...+||.+..+.+. +.-+|-..+.+.++..+..
T Consensus 9 ~~l~V~nlp~~----~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 9 RSVFVGNIPYE----ATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp SCEEEESCCTT----SCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred cEEEEeCCCCc----CCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34567887532 2445678888899988666642 1234555688888888753
No 148
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=20.42 E-value=2.5e+02 Score=20.26 Aligned_cols=58 Identities=14% Similarity=0.076 Sum_probs=38.3
Q ss_pred CCCcceeeecccCCCCCChHHHHHHHHHhcCCeeEEEeC------CeeEEEEeCHHHHHHHHhh
Q 038607 49 GGAWPVTGHLHLLGGPEPPHRVLGAMADKCGPIFTIKMG------INRALVVSNWEMAKECLTT 106 (181)
Q Consensus 49 p~~~p~~G~l~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~vvv~~p~~i~~vl~~ 106 (181)
+...-++||+..-....+..+.+.+.+.+||.|..+.+. +.-+|-..+.+.++..+..
T Consensus 8 ~~~~l~V~nlp~~~~~~~l~~~L~~~F~~~G~i~~v~~~~~~~~~g~afV~f~~~~~a~~A~~~ 71 (282)
T 3pgw_A 8 PNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 71 (282)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhccCCeEEEEEcCCCCcceEEEEEECCHHHHHHHHHH
Confidence 345678899864432123334477888999998877753 2456667788888887743
No 149
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=20.25 E-value=2e+02 Score=19.13 Aligned_cols=51 Identities=14% Similarity=0.127 Sum_probs=34.6
Q ss_pred cceeeecccCCCCCChHHHHHHHHHhcC--CeeEEEeC-----C----eeEEEEeCHHHHHHHHhh
Q 038607 52 WPVTGHLHLLGGPEPPHRVLGAMADKCG--PIFTIKMG-----I----NRALVVSNWEMAKECLTT 106 (181)
Q Consensus 52 ~p~~G~l~~~~~~~~~~~~~~~~~~~yG--~v~~~~~~-----~----~~~vvv~~p~~i~~vl~~ 106 (181)
.-++|||..- --...+.+.+.+|| .+..+.+. + .-+|-..+.+.++..+..
T Consensus 57 ~lfVgnLp~~----~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 57 AVYVGSFSWW----TTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp EEEEECCCTT----CCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC----CCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3467776532 24456788889999 88777752 1 245667788888888765
Done!